BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006010
         (664 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  969 bits (2504), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 458/632 (72%), Positives = 533/632 (84%), Gaps = 12/632 (1%)

Query: 44  AVSSNKQMETEPQGNA------------KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQ 91
           A+ S K +ETEPQ +             + + P SD+IF S PK+GSY+LGDSTFYSLI 
Sbjct: 9   AIPSTKTIETEPQSHPLHRNASDREHGIEHDPPISDKIFKSGPKMGSYKLGDSTFYSLID 68

Query: 92  HYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK 151
           +YAN GDFKSLE VL RMR EKRVV+EK F+ IFKAYGKAHL E+A+ LF  M  EF CK
Sbjct: 69  NYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRMAYEFECK 128

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           RTVKSFNSVLNVIIQEGL++RALEFYNH++ AK +NI PN LTFNLVIKT+C++GLVD+A
Sbjct: 129 RTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDA 188

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           +Q+FR+MPV  C+PD+YTYCTLMDGLCK +R+DEAV LLDEMQ+DGCFP+PVTFNVLING
Sbjct: 189 VQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLING 248

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK G+L R AKLVDNMFLKGC PNEVTYNTLIHGLCLKG L+KA+SLLDRMV+SKC+PN
Sbjct: 249 LCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPN 308

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTYGTIINGLVK GRA+DGARVL  MEER +HVNEY+YS LISGLFKEGK+++AM+L+K
Sbjct: 309 VVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFK 368

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M  K C+ NT+VYSA+IDGLCR GKPDEA E+L EM NN C  NA+TYSSLMKGFFE+G
Sbjct: 369 EMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAG 428

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
            GHKA+E+WKDMAK+N   NEVCYSVLIHGLC+DGK++EA MVW QML +GCKPDVVAY 
Sbjct: 429 NGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYG 488

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           SMI+GL NAG VE+AL+L+NEMLC EP SQPDV TYNILLNALCKQS+IS +IDLLNSM+
Sbjct: 489 SMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSML 548

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
           DRGCDPDLVTC IFL  L+EKL+ PQDG +FL+ L +RL KRQR  G  KIVEVMLQK L
Sbjct: 549 DRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLL 608

Query: 632 SPQTSTWERVVQELCRPKRIQAAINKCWSNLY 663
            P+ STW RVV++LC PK++QAAI KCWS LY
Sbjct: 609 PPKPSTWTRVVEDLCNPKKVQAAIQKCWSILY 640


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  963 bits (2489), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 457/629 (72%), Positives = 529/629 (84%), Gaps = 4/629 (0%)

Query: 35  SHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYA 94
           S RF S R+ ++ N  +E    G+     P SD+IF+S PK+GS+++GDSTFYSLI++YA
Sbjct: 28  SMRFHSSRT-LNQNNDLE---NGSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYA 83

Query: 95  NSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTV 154
            S DF SLE VL RMR E RV  EKSF  +FKAYGKAHL  +AI LF+ M  EF+CK TV
Sbjct: 84  YSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTV 143

Query: 155 KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
           KSFNSVLNVIIQ G + RALEFYNH+V AK MNILPN L+FNL+IK++C+LGLVDNAI+L
Sbjct: 144 KSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIEL 203

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           FREMPVR C PD YTYCTLMDGLCK +R+DEAV LLDEMQ++GCFP+P TFNVLINGLCK
Sbjct: 204 FREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCK 263

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G+  R  KLVDNMFLKGC+PNEVTYNTLIHGLCLKG LDKA+SLLDRMV+SKC+PNEVT
Sbjct: 264 KGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVT 323

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           YGTIINGLVK GRA+DGARVL+ MEER + VNEY+YS L+SGLFKEGK+E+AM+L+K+ M
Sbjct: 324 YGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESM 383

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           +KGCK NTV+YSAL+DGLCR  KPDEA +IL EM + GCA NAFT+SSLMKGFFE G  H
Sbjct: 384 DKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSH 443

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           KA+E+WKDM K NC  NEVCYSVLIHGLC+DGK+ EA MVW +ML+ GC+PDVVAYSSMI
Sbjct: 444 KAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMI 503

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GLC+AGSVEEALKL+NEMLCLEP SQPDV TYNIL NALCKQS+IS ++DLLNSM+DRG
Sbjct: 504 QGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRG 563

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
           CDPDLVTCNIFL  L+EKL+ PQDG  FL+EL +RL KRQR  G  KIVEVMLQKFLSP+
Sbjct: 564 CDPDLVTCNIFLRMLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPK 623

Query: 635 TSTWERVVQELCRPKRIQAAINKCWSNLY 663
            STW RVV ELC+PK+IQA I+KCWS LY
Sbjct: 624 ASTWARVVHELCQPKKIQAVIDKCWSKLY 652


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  947 bits (2447), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 460/664 (69%), Positives = 540/664 (81%), Gaps = 18/664 (2%)

Query: 16  TNSAMKMKTLSLTTIPSE----RSHRFFSVRSAVSSNKQMETEP------------QGNA 59
           TNS +K    +L + PS+      H  FS   A+ S K +ETEP            +   
Sbjct: 9   TNSILKALN-NLFSFPSKFLSLSMHSNFSAH-AIPSTKTIETEPLNHTQHCNTTDQENGI 66

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK 119
           + + P SD+IF S PK+GSY+LGDSTFYSLI +YAN GDFKSLE VL RM+ EKRV+ EK
Sbjct: 67  EPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEK 126

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
            FI IFKAYGKAHL E+A+ LF  M  EF CKRT KSFNSVLNVIIQEGL+HRALEFYNH
Sbjct: 127 CFIVIFKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNH 186

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++ AK ++I PN LTFNLVIK +C++GLVD+AIQ+FR+M +R CEPD+YTYCTLMDGLCK
Sbjct: 187 VIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCK 246

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            +R+DEAV LLDEMQ+DGCFP+PVTFNVLINGLCK G+L RAAKLVDNMFLKGC+PNEVT
Sbjct: 247 ADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVT 306

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTLIHGLCLKG L+KA+SLLDRMV+SKC+PN VTYGTIINGLVK GRA+DGA VL  ME
Sbjct: 307 YNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVLALME 366

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           ER + VNEY+YSTLISGLFKEGK+++AM L+K+M  KG + NT+VYSA+IDGLCR GKPD
Sbjct: 367 ERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPD 426

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A E+L EM N GC  NA+T SSLMKGFFE+G  H+AVE+WKDMAK+N   NEVCYSVLI
Sbjct: 427 DAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLI 486

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           HGLC+DGK++EA MVWTQML +GCKPDVVAYSSMI+GL  AG VE+A++L+NEMLC  P 
Sbjct: 487 HGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPD 546

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
           SQPDV TYNILLN LCKQS+IS +IDLLNSM+DRGCDPDLVTC IFL  L+EKL+ PQDG
Sbjct: 547 SQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDG 606

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCW 659
            +FL+EL +RL KRQR  G  KIVEVMLQK L P+ STW RVV+ LC+PK++QA I KCW
Sbjct: 607 REFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQKCW 666

Query: 660 SNLY 663
           S LY
Sbjct: 667 SILY 670


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  942 bits (2435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 444/626 (70%), Positives = 525/626 (83%), Gaps = 10/626 (1%)

Query: 38  FFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSG 97
           FFS RS  + +           +S+ P  D+IF S  ++GSY+ GDSTFYSLI++YANSG
Sbjct: 28  FFSFRSKTTLSPY---------ESDAPIPDQIFKSASQMGSYKSGDSTFYSLIENYANSG 78

Query: 98  DFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSF 157
           DF +L  V  RM+RE+RV +EK+FI +F+AYGKAHL E+AI LF  MVDEF C+RTV+SF
Sbjct: 79  DFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSF 138

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           NSVLNVIIQEGL+HRALEFY   V  K  NI PN L+FNLVIK +C+LGLVD AI++FRE
Sbjct: 139 NSVLNVIIQEGLFHRALEFYECGVGGK-TNISPNVLSFNLVIKAMCKLGLVDRAIEVFRE 197

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M ++ CEPD++TYCTLMDGLCKE+R+DEAVLLLDEMQ++GCFP+ VTFNVLINGLCK G+
Sbjct: 198 MAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGD 257

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           + R  KLVDNMFLKGC+PNEVTYNT+I+GLCLKG LDKAVSLLDRMVASKC+PN+VTYGT
Sbjct: 258 MVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGT 317

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +INGLVK GR+VDG  +L S+EER  H NEY YSTLISGLFKE K+E+AM LWK+M+EKG
Sbjct: 318 LINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKG 377

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           C+PN VVYSALIDGLCR GK DEA+EIL EM+N GC  NAFTYSSL+KGFF++G   KA+
Sbjct: 378 CQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAI 437

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            +WK+MAKNNCV NE+CYSVLIHGLCEDGKLREA M+WT ML RG +PDVVAYSSMIHGL
Sbjct: 438 RVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGL 497

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           CNAGSVE  LKLFNEMLC E  SQPDV TYNILL ALCKQ++ISH+IDLLNSM+DRGC+P
Sbjct: 498 CNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNP 557

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           DL+TCNIFL AL+EKL  PQDG +FL+EL +RL KRQR  G  KI+EVMLQKFL P  ST
Sbjct: 558 DLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNAST 617

Query: 638 WERVVQELCRPKRIQAAINKCWSNLY 663
           WER++ ELC+PK++QA I+KCWS+L+
Sbjct: 618 WERIIPELCKPKKVQAIIDKCWSSLF 643


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  936 bits (2420), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 436/595 (73%), Positives = 512/595 (86%), Gaps = 1/595 (0%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           IF S  ++GSY+ GDSTFYSLI++YANSGDF +L  V  RM+RE+RV +EK+FI +F+AY
Sbjct: 66  IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 125

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           GKAHL E+AI LF  MVDEF C+RTV+SFNSVLNVIIQEGL+HRALEFY   V  K  NI
Sbjct: 126 GKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGK-TNI 184

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN L+FNLVIK +C+LGLVD AI++FREM ++ CEPD++TYCTLMDGLCKE+R+DEAVL
Sbjct: 185 SPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVL 244

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LLDEMQ++GCFP+ VTFNVLINGLCK G++ R  KLVDNMFLKGC+PNEVTYNT+I+GLC
Sbjct: 245 LLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLC 304

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           LKG LDKAVSLLDRMVASKC+PN+VTYGT+INGLVK GR+VDG  +L S+EER  H NEY
Sbjct: 305 LKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEY 364

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YSTLISGLFKE K+E+AM LWK+M+EKGC+PN VVYSALIDGLCR GK DEA+EIL EM
Sbjct: 365 AYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEM 424

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +N GC  NAFTYSSL+KGFF++G   KA+ +WK+MAKNNCV NE+CYSVLIHGLCEDGKL
Sbjct: 425 VNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKL 484

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           REA M+WT ML RG +PDVVAYSSMIHGLCNAGSVE  LKLFNEMLC E  SQPDV TYN
Sbjct: 485 REAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYN 544

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           ILL ALCKQ++ISH+IDLLNSM+DRGC+PDL+TCNIFL AL+EKL  PQDG +FL+EL +
Sbjct: 545 ILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVV 604

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLY 663
           RL KRQR  G  KI+EVMLQKFL P  STWER++ ELC+PK++QA I+KCWS+L+
Sbjct: 605 RLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIIDKCWSSLF 659


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  869 bits (2246), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/628 (65%), Positives = 509/628 (81%), Gaps = 6/628 (0%)

Query: 37  RFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANS 96
           RF +   +VS N  ME E       E P S+++F S PK+GS++LGDST  S+I++YAN 
Sbjct: 35  RFSASSVSVSPNPSMEVE----TPLEAPISEQMFKSAPKMGSFKLGDSTLSSMIENYANL 90

Query: 97  GDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKS 156
           GDF S+E +L R+R E RV++E+SFI +F+AYGKAHL E+A+ LFH MVDEF CKR+VKS
Sbjct: 91  GDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKS 150

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           FNSVLNVII EGLYHR LEFY+++VN+  +MNI PN L+FNLVIK +C+LG VD AI++F
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVF 210

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R MP + C PD YTYCTLMDGLCKE R+DEAVLLLDEMQ +GC P+PV +NVLI+GLCK 
Sbjct: 211 RGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L R  KLVDNMFLKGC PNEVTYNTLIHGLCLKG LDKAVSLL+RMV+SKC+PN+VTY
Sbjct: 271 GDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
           GT+INGLVK  RA+DGAR+L+SMEER + +N++IYS LISGLFKEGKAE+AM LWK+M E
Sbjct: 331 GTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAE 390

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KGC+PN VVYSA+IDGLCR GKP+EA+EIL  MI++GC  N +TYSSLMKGFF++G   +
Sbjct: 391 KGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEE 450

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+++W++M +  C  NE CYSVLI GLC  G+++EA MVW++ML+ G KPD VAYSSMI 
Sbjct: 451 AIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIK 510

Query: 516 GLCNAGSVEEALKLFNEMLCL-EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           GLC  GS++ ALKL++EMLC  EPKSQPDV TYNILL+ LC Q ++S ++DLLN M+DRG
Sbjct: 511 GLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRG 570

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
           CDPD++TCN FL  L EK ++ ++G  FL EL  RL KRQR SG  KIVEVML K+L+P+
Sbjct: 571 CDPDVITCNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPK 630

Query: 635 TSTWERVVQELCRPKRIQAAINKCWSNL 662
           TSTW  +V E+C+PK+I AAINKCW NL
Sbjct: 631 TSTWAMIVPEICKPKKINAAINKCWRNL 658


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  863 bits (2231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/603 (66%), Positives = 494/603 (81%), Gaps = 2/603 (0%)

Query: 62  EQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF 121
           E P S+++F S PK+GS++LGDST  S+I+ YANSGDF S+E +L R+R E RV++E+SF
Sbjct: 56  EAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSF 115

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           I +F+AYGKAHL ++A+ LFH MVDEF CKR+VKSFNSVLNVII EGLYHR LEFY+++V
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175

Query: 182 NAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           N+  +MNI PN L+FNLVIK +C+L  VD AI++FR MP R C PD YTYCTLMDGLCKE
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            R+DEAVLLLDEMQ +GC P+PV +NVLI+GLCK G+L R  KLVDNMFLKGC+PNEVTY
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTLIHGLCLKG LDKAVSLL+RMV+SKC+PN+VTYGT+INGLVK  RA D  R+L SMEE
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R +H+N++IYS LISGLFKEGKAE+AM LW++M EKGCKPN VVYS L+DGLCR GKP+E
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A+EIL  MI +GC  NA+TYSSLMKGFF++G   +AV++WK+M K  C  N+ CYSVLI 
Sbjct: 416 AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL-EPK 539
           GLC  G+++EA MVW++ML+ G KPD VAYSS+I GLC  GS++ ALKL++EMLC  EPK
Sbjct: 476 GLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPK 535

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
           SQPDV TYNILL+ LC Q +IS ++DLLNSM+DRGCDPD++TCN FL  L EK  +   G
Sbjct: 536 SQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKG 595

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCW 659
             FL EL +RL KRQR SG   IVEVML K+L+P+TSTW  +V+E+C+PK+I AAI+KCW
Sbjct: 596 RSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCW 655

Query: 660 SNL 662
            NL
Sbjct: 656 RNL 658


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  857 bits (2215), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/595 (67%), Positives = 488/595 (82%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           EIF S  ++GSY+LGD +FYSLI+ +A+S DF+SLE VL++M+RE+RV LEK+FI +FKA
Sbjct: 46  EIFKSGTQMGSYKLGDLSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKA 105

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           YGKAHL E+A+ LFH M  EF CK+TVKSFNSVLNVI+QEGL++RALEFYNH+V +K +N
Sbjct: 106 YGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLN 165

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I PN LTFNLVIK +CRLGLVD AI++FRE+P+RNC PD YTY TLM GLCKE R+DEAV
Sbjct: 166 IHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAV 225

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LLDEMQV+G FP  V FNVLI+ LCK G+LGRAAKLVDNMFLKGC+PNEVTYN L+HGL
Sbjct: 226 SLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGL 285

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           CLKG L+KAVSLL++MV++KC+PN+VT+GT+ING V  GRA DG RVL+S+E R    NE
Sbjct: 286 CLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNE 345

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           Y+YS+LISGL KEGK   AM+LWK+M+ KGC PNT+VYSALIDGLCR GK DEA   L E
Sbjct: 346 YVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSE 405

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M N G   N+FTYSSLM+G+FE+G  HKA+ +WK+MA NNC++NEVCYS+LI+GLC+DGK
Sbjct: 406 MKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGK 465

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
             EA MVW QMLSRG K DVVAYSSMIHG CNA  VE+ LKLFN+MLC  P  QPDV TY
Sbjct: 466 FMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITY 525

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           NILLNA C Q +I  +ID+LN M+D+GCDPD +TC+IFL  L+E +  PQDG +FL+EL 
Sbjct: 526 NILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELV 585

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
           +RL KRQRT G  KI+EVM+ KFL P+ STW  VVQ++C+PK ++ AI++CWS L
Sbjct: 586 VRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKAISECWSRL 640


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 394/634 (62%), Positives = 483/634 (76%), Gaps = 6/634 (0%)

Query: 31  PSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLI 90
           P+  S  F+     +SSN         +A++E   S +IF S P+ GSY+LGD+TFY LI
Sbjct: 43  PARLSPFFYFSSLPLSSNST------PDAQNELSISPQIFKSRPQFGSYKLGDATFYRLI 96

Query: 91  QHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHC 150
           ++YA S +F  +  VL RM+RE RV+ E  FI IFKA GKAHL  EA+  FH M ++ HC
Sbjct: 97  ENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHC 156

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K+TVKSFNSVLNVIIQEG +  A +FY H+  A      PN LT+NL+IK +C+LG +D 
Sbjct: 157 KQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDR 216

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A+  FREMP++NC PD++TY TLM+GLCKE R+DEAV LLDEMQ +GC P PVTFNVLI+
Sbjct: 217 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLID 276

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            L KNG+L RAAKLVDNMFLKGC+PNEVTYNTLIHGLCLKG LDKA+SLL++MV+SKC+P
Sbjct: 277 ALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVP 336

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N+VTYGTIINGLVK  RA DG  +LMSMEER    NEYIYS+LISGLFKEGK+E+A++LW
Sbjct: 337 NQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLW 396

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           K+M EKGCKPN VVY A IDGLCR  KPDEAE+IL EM++ G   NAFTYSSLMKGFF+ 
Sbjct: 397 KEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKK 456

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G   KA+ +WK+M   +  +N VC SVL++GLCE G+LREA  VWT ML  G KPDVVAY
Sbjct: 457 GDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAY 516

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           SSMI GLC+ GSV++ LKLF EM C EPKS+PDV TYNIL NALC+Q N++ +IDLLNSM
Sbjct: 517 SSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 576

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
           +D GCDPD +TCNIFL  L+E++  PQDG  FL+EL +RL KR+R     +IVE ML +F
Sbjct: 577 LDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRF 636

Query: 631 LSPQTSTWERVVQELCRPKRIQAAINKCWSNLYG 664
           L P+ STW RV+Q  C+PKRI+  I++C  +LYG
Sbjct: 637 LPPEPSTWSRVIQRTCKPKRIRETIDECCRSLYG 670


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/641 (62%), Positives = 489/641 (76%), Gaps = 7/641 (1%)

Query: 24  TLSLTTIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGD 83
           T+SL   P+  S  F+     +SSN    + P  +A++E   S +IF S P+ GSY+LGD
Sbjct: 13  TISLHK-PARLSPFFYFSSLPLSSN----STP--DAQNELSISPQIFKSRPQFGSYKLGD 65

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +TFY LI++YA S +F  +  VL RM+RE RV+ E  FI IFKA GKAHL  EA+  FH 
Sbjct: 66  ATFYRLIENYATSREFHFIHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHR 125

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M ++ HCK+TVKSFNSVLNVIIQEG +  A +FY H+  A      PN LT+NL+IK +C
Sbjct: 126 MANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALC 185

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +LG +D A+  FREMP++NC PD++TY TLM+GLCKE R+DEAV LLDEMQ +GC P PV
Sbjct: 186 KLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPV 245

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           TFNVLI+ L KNG+L RAAKLVDNMFLKGC+PNEVTYNTLIHGLCLKG LDKA+SLL++M
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 305

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V+SKC+PN+VTYGTIINGLVK  RA DG  +LMSMEER    NEYIYS+LISGLFKEGK+
Sbjct: 306 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 365

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E+A++LWK+M EKGCKPN VVY A IDGLCR  KPDEAE+IL EM++ G   NAFTYSSL
Sbjct: 366 ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSL 425

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           MKGFF+ G   KA+ +WK+M   +  +N VC SVL++GLCE G+LREA  VWT ML  G 
Sbjct: 426 MKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGL 485

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           KPDVVAYSSMI GLC+ GSV++ LKLF EM C EPKS+PDV TYNIL NALC+Q N++ +
Sbjct: 486 KPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRA 545

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
           IDLLNSM+D GCDPD +TCNIFL  L+E++  PQDG  FL+EL +RL KR+R     +IV
Sbjct: 546 IDLLNSMLDEGCDPDSLTCNIFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIV 605

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLYG 664
           E ML +FL P+ STW RV+Q  C+PKRI+  I++C  +LYG
Sbjct: 606 EEMLLRFLPPEPSTWSRVIQRTCKPKRIRETIDECCRSLYG 646


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  822 bits (2122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/601 (63%), Positives = 487/601 (81%), Gaps = 1/601 (0%)

Query: 63  QPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI 122
           Q F      S+ K GSY+LGD +FYSLI++++NS DF SLE +L++M+ E RV +EKSFI
Sbjct: 45  QIFKSPSNTSSHKWGSYKLGDLSFYSLIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFI 104

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            +FKAYGKAHL ++A+ LFH M  EFHCK+TVKSFN+VLNV+IQEG +  ALEFYNH+++
Sbjct: 105 IMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVID 164

Query: 183 AKHM-NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           +    NI PN L+FNLVIK +CR+G VD A+++FR M  RNC  D YTY TLM GLC E 
Sbjct: 165 SNSFSNIQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEG 224

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           R+DEAV LLDEMQV+G FP PV FNVLI+ LCK G+L RA+KLVDNMFLKGC+PNEVTYN
Sbjct: 225 RIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYN 284

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           +L+HGLCLKG LDKA+SLL+RMVA+KC+PN++T+GT+++G VK GRA+DG RVL+S+EE+
Sbjct: 285 SLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEK 344

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            +  NE+ YS+LISGLFKEGK E  M+LWK+M+EKGCKPNT+VYSALIDGLCR GKPDEA
Sbjct: 345 GYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEA 404

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           +E L EM N G   N+FTYSSLM G+FE+G  HKA+ +WK+M  N+C ++EVCYS+LI+G
Sbjct: 405 KEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILING 464

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC++GKL+EA +VW QMLSRG K DVVAYSSMIHG CNA  VE+ +KLFN+MLC  PK Q
Sbjct: 465 LCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQ 524

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PDV TYNILLNA C ++++S +ID+LN+M+D+GCDPD +TC+IFL  L++ ++ PQDG +
Sbjct: 525 PDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGRE 584

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSN 661
           FL+EL +RL KRQRT G   I+EVMLQKFL P+ STW   VQ+LC+P +++  I++C S 
Sbjct: 585 FLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKTISECQSR 644

Query: 662 L 662
           +
Sbjct: 645 M 645


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  655 bits (1691), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 298/465 (64%), Positives = 381/465 (81%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           ++  +CR+G VD A+++FR M  RNC  D YTY TLM GLC E R+DEAV LLDEMQV+G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
            FP PV FNVLI+ LCK G+L RA+KLVDNMFLKGC+PNEVTYN+L+HGLCLKG LDKA+
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           SLL+RMVA+KC+PN++T+GT+++G VK GRA+DG RVL+S+EE+ +  NE+ YS+LISGL
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
           FKEGK E  M+LWK+M+EKGCKPNT+VYSALIDGLCR GKPDEA+E L EM N G   N+
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           FTYSSLM G+FE+G  HKA+ +WK+M  N+C ++EVCYS+LI+GLC++GKL+EA +VW Q
Sbjct: 246 FTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQ 305

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           MLSRG K DVVAYSSMIHG CNA  VE+ +KLFN+MLC  PK QPDV TYNILLNA C +
Sbjct: 306 MLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTK 365

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
           +++S +ID+LN+M+D+GCDPD +TC+IFL  L++ ++ PQDG +FL+EL +RL KRQRT 
Sbjct: 366 NSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELVVRLIKRQRTV 425

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
           G   I+EVMLQKFL P+ STW   VQ+LC+P +++  I++C S +
Sbjct: 426 GASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKTISECQSRM 470



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 161/348 (46%), Gaps = 7/348 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            F  LI      GD      ++  M  +  V  E ++  +         +++A+ L + M
Sbjct: 72  AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRM 131

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V    C     +F ++++  ++ G   RAL+    +V+ +      N  +++ +I  + +
Sbjct: 132 VAN-KCVPNDITFGTLVDGFVKHG---RALDGVRVLVSLEEKGYRGNEFSYSSLISGLFK 187

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G  ++ +QL++EM  + C+P+   Y  L+DGLC+E + DEA   L EM+  G  P   T
Sbjct: 188 EGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFT 247

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ L+ G  + G++ +A  +   M    C  +EV Y+ LI+GLC  G L +A+ +  +M+
Sbjct: 248 YSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQML 307

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM--EERKFHVNEYIYSTLISGLFKEGK 382
           +     + V Y ++I+G         G ++   M     K   +   Y+ L++    +  
Sbjct: 308 SRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNS 367

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGL-CRVGKPDEAEEILFEMI 429
              A+ +   M+++GC P+ +     +  L   +  P +  E L E++
Sbjct: 368 VSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQDGREFLDELV 415


>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Brachypodium distachyon]
          Length = 746

 Score =  412 bits (1059), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 227/611 (37%), Positives = 337/611 (55%), Gaps = 30/611 (4%)

Query: 62  EQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF 121
           + P + E+F +         G  T  S+ +  ANS    S   VL  +RR         F
Sbjct: 155 DPPLAHELFPAA--------GAPTLLSVARSLANSPS-PSAASVLGFLRRLPTDASPHLF 205

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
             +  A  ++     A+RLF  +        T  SFNS L         H    F++H +
Sbjct: 206 PHLIAALSRSPRPLLALRLF--LRPPTSAAITHHSFNSALLRFPLPP--HLLPAFFSHSL 261

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF---------REMPVRNCEPDIYTYCT 232
             +   + P  L+FNL++K VC   LV    QL+         R +P     PD +TY T
Sbjct: 262 R-RFTRLAPTLLSFNLLLKCVCS-SLVPRNHQLYLELALRVVHRSIPAWKLVPDKFTYST 319

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           ++  L    R+D+AV L+ EM VDG       FN ++  + + G++  AAKL   M LKG
Sbjct: 320 VVSALADAGRVDDAVALVHEMVVDGVVAA-EAFNPVLGAMLRTGDVTGAAKLFSFMQLKG 378

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C P+  TYN L+HGL L G    A+ ++ RM  ++ +P  +TYG +++GLV+ GR  D  
Sbjct: 379 CAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGRLEDAC 438

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           +V+  M  +    NE+++S +I+G  K G+ + A ++W  M+  G KPN V+YSA+IDGL
Sbjct: 439 KVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSAMIDGL 498

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            R GK  EAE +  EMI   C  N  TYSS+++G+F+ G   +A+  W+DM +  C  N 
Sbjct: 499 ARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIGCTPNA 558

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V YSVLI+GLC  G+ ++A MVW  ML RGC PD +AY+SMI G C +G V+  L+LF +
Sbjct: 559 VTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGLRLFYD 618

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           ML     + PDV  YN+LL+ L +  ++  ++DLLN M+D+ CDPD VTCN FL     +
Sbjct: 619 MLA-RGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTCNTFL----RE 673

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           +E  Q G +FL  L +RL  R+R     +++ VML K++ P+ +  E VV+ +CR KR+ 
Sbjct: 674 IEVGQKGQEFLEGLVVRLCNRKRNKAAGEVLMVMLAKYIVPEAAVLEMVVRGVCRRKRVW 733

Query: 653 AAINKCWSNLY 663
             I+KCW  ++
Sbjct: 734 RVIDKCWDEIW 744


>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
 gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
 gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
          Length = 642

 Score =  402 bits (1034), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/486 (40%), Positives = 299/486 (61%), Gaps = 13/486 (2%)

Query: 187 NILPNTLTFNLVIKTVCRLGL-------VDNAIQLFREM-PVRNCEPDIYTYCTLMDGLC 238
            + P  L+FNL++K VC   +       +D A+++  E+ P  +  PD +TY T++  L 
Sbjct: 161 RLAPTLLSFNLLLKCVCSSLVPRDPGRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALA 220

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
              R+D+AV L+ EM  DG       FN ++  + + G++  AAKL   M LKGC+P   
Sbjct: 221 DAGRVDDAVALVHEMVADGVVAAE-AFNPVLRAMLRAGDVKGAAKLFGFMQLKGCVPTTA 279

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TYN L+HGL + G    A+ ++ RM     +P  +TYG +++GLV+ GR  D  +V   M
Sbjct: 280 TYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEM 339

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E      NE++YST+I+G  K G+ + A+K+W+ M+    +PN V+YSA+I GL   GK 
Sbjct: 340 ERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKM 399

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EAE +  EMI++ CA N  TY S+++G+F+ G   +A+ +W++M    CV N V YS+L
Sbjct: 400 TEAELLFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSIL 459

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I+GLC  G+L++A MVW  ML RGC PD +AY+SMI GLC +G V+  L+LF +ML    
Sbjct: 460 INGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLA-SG 518

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
            + PDV +YN+LL+ L    ++  ++DLLN M+D+GCDPD VTCNIF   L+E     + 
Sbjct: 519 HADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIF---LREFGAGERK 575

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
           G +FL  L +RL  R+R     +++ VML K++ P+   WE VV+++CR KR+   I+KC
Sbjct: 576 GREFLEGLVVRLCDRRRNMAAGEVLMVMLAKYIVPEAPIWEMVVRDVCRRKRVWRVIDKC 635

Query: 659 WSNLYG 664
           W  ++G
Sbjct: 636 WDEIWG 641


>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
          Length = 552

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/483 (40%), Positives = 299/483 (61%), Gaps = 13/483 (2%)

Query: 190 PNTLTFNLVIKTVCRLGL-------VDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKEN 241
           P  L+FNL++K VC   +       +D A+++  E+ P  +  PD +TY T++  L    
Sbjct: 74  PTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALADAG 133

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           R+D+AV L+ EM  DG       FN ++  + + G++  AAKL + M LKGC+P   TYN
Sbjct: 134 RVDDAVALVHEMVADGVVAAE-AFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYN 192

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            L+HGL + G    A+ ++ RM     +P  +TYG +++GLV+ GR  D  +V   ME  
Sbjct: 193 VLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERN 252

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               NE++YST+I+G  K G+ + A+K+W+ M+    +PN V+YSA+I GL   GK  EA
Sbjct: 253 GLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVVLYSAMIGGLANFGKMTEA 312

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           E +  EMI++ CA N  TY S+++G+F+ G   +A+ +W++M    C+ N V YS+LI+G
Sbjct: 313 ELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILING 372

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC  G+L++A MVW  ML RGC PD +AY+SMI GLC +G V+  L+LF +ML     + 
Sbjct: 373 LCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLA-SGHAD 431

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PDV +YN+LL+ L    ++  ++DLLN M+D+GCDPD VTCNIF   L+E     + G +
Sbjct: 432 PDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTCNIF---LREFGAGERKGRE 488

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSN 661
           FL  L +RL  R+R     +++ VML K++ P+   WE VV+++CR KR+   I+KCW  
Sbjct: 489 FLEGLVVRLCDRRRNMAAGEVLMVMLAKYIVPEAPIWEMVVRDVCRRKRVWRVIDKCWDE 548

Query: 662 LYG 664
           ++G
Sbjct: 549 IWG 551


>gi|414874000|tpg|DAA52557.1| TPA: hypothetical protein ZEAMMB73_743775 [Zea mays]
          Length = 630

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 220/645 (34%), Positives = 347/645 (53%), Gaps = 39/645 (6%)

Query: 27  LTTIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTF 86
           LT +PS  +      RS+ SS+ ++            P + E+F   P  G       T 
Sbjct: 15  LTYLPSLAASNARGCRSSSSSDDEL------------PLAAELF---PAAGP------TL 53

Query: 87  YSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVD 146
            S+ +  A +    S   VL  + R         F  +  A  ++     A+RLF  +  
Sbjct: 54  LSIARSLAVASPPPSAASVLGFLCRLPHDASPHIFPHLVAALARSPRPVLALRLF--LSP 111

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
                 T  SFNS L         H    F+ H +  +   + P  L+FNL++K +C   
Sbjct: 112 PTSAATTHHSFNSALLRFPLP--LHLLPAFFTHSI-LRFPGLTPTLLSFNLLLKCICSSM 168

Query: 207 LVDN-------AIQLFRE-MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           +  N       A+ +  + +P  N  PD +TY T++  L     ++EAV L+ EM VDG 
Sbjct: 169 VPRNPGLYLAVALGILHDVIPAWNLVPDKFTYSTVVSALADAGCVEEAVALVHEMVVDGV 228

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
             +   FN ++  + + G++  A KL   M LKGC    VTYN L+HGL L G    A++
Sbjct: 229 V-SAEAFNPVLKAMLRAGDVNGAVKLFRFMQLKGCTLTAVTYNVLLHGLLLCGEARAAMN 287

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           ++ RM     +P  +TYG +++GLVK GR  D  +V   M  +    +E+++S +I+G  
Sbjct: 288 IMRRMENEGIVPGLMTYGAVVDGLVKCGRVEDAWKVAQEMGGQGLAPSEFVFSAVITGFC 347

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K G+ + A+ +W+ M+    KPN V+YSA+IDG  R G+  EAE++  EM++  C  N  
Sbjct: 348 KSGEVDRALMVWETMVAARVKPNVVLYSAMIDGFARSGRMTEAEKLFEEMVDAKCIPNIV 407

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TYSS+++G+F      +A+  W++M K  CV   + YS+LI GLC+ G+L++A MVW  M
Sbjct: 408 TYSSMVRGYFHIANSSRALSTWEEMIKVGCVPTAISYSILISGLCDVGRLKDAMMVWKNM 467

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           + RGC PD +AY+SM+ GLC +G V+  L+LFN+ML  +  ++PDV +YN+LL+AL + +
Sbjct: 468 IGRGCAPDTIAYTSMMKGLCMSGMVDGGLRLFNDMLA-KGDAKPDVISYNVLLDALIRTN 526

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           ++  ++DLLN M+D+ CDPD +TCNIF   L+E       G +FL  L +RL  R R   
Sbjct: 527 DLPRAMDLLNQMLDQMCDPDTITCNIF---LREFGVLEGKGREFLEGLVMRLCYRDRYRA 583

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLY 663
              +V VML K++ P+   W  +V+ +C+ KR+Q  ++ CW  ++
Sbjct: 584 AGDVVMVMLAKYIVPEAGIWYTIVRGVCQTKRVQKVVDNCWDEIW 628


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  323 bits (829), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 197/593 (33%), Positives = 308/593 (51%), Gaps = 33/593 (5%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           S EIF        Y    S +Y LI     +  FK ++ +L +M+ E  V  E  FI I 
Sbjct: 87  SMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIM 146

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           K YG+A L  +A RL   M   + C+ + +S+N VL+V++       A   +  +++   
Sbjct: 147 KYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSK-- 204

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             + PN  TF LV+K +C +  VDNA  L R+M    C P+   Y TL+D L K +R+DE
Sbjct: 205 -GVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDE 263

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ LL+EM + GC P   TFN +I G C+   +   AKLVD M LKG  PN++TY  L+H
Sbjct: 264 ALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMH 323

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG-ARVLMSMEERKFH 364
           GLC    +D+A +LL ++      PN V + T++NG V+ GR  +  A V   M    + 
Sbjct: 324 GLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYV 379

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            + + +STL++GL K+G    A++L   M  KGCKPN   Y+ LIDG C+ G+ +EA  I
Sbjct: 380 PDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLI 439

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L EM+  G + N   Y++L+    + GK H+A++++ +M+   C  +   ++ LI GLC 
Sbjct: 440 LREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCR 499

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP-D 543
             ++ +A  ++  M+  G   + V ++++IH     G ++EALKL N+ML    +  P D
Sbjct: 500 VDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLF---RGCPLD 556

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
             TYN L+ ALCK   +   + L   M+ +G  P ++TCNI +                 
Sbjct: 557 EITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTA----------- 605

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                      +     + +  M+ +  SP   T+  ++  LC+  RIQ A+N
Sbjct: 606 ----------GKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALN 648



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 227/468 (48%), Gaps = 38/468 (8%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A  K   V+EA++L   M     C   V +FN+V+    +    +R LE    +   
Sbjct: 251 LIDALSKRDRVDEALKLLEEMF-LMGCPPDVNTFNTVIYGFCR---LNRVLEGAKLVDRM 306

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP--------------VRNCE----- 224
                 PN +T+  ++  +C+   +D A  L  ++P              VRN       
Sbjct: 307 ILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPGPNVVHFNTLVNGFVRNGRLNEAT 366

Query: 225 -------------PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
                        PD++T+ TL++GLCK+     A+ L+++M   GC P   T+ +LI+G
Sbjct: 367 AFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDG 426

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            CK G+L  A  ++  M  KG   N V YN LI  LC  G + +A+ +   M +  C P+
Sbjct: 427 FCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPD 486

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             T+ ++I GL ++    D   +   M       N   ++TLI    + G+ ++A+KL  
Sbjct: 487 IFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVN 546

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M+ +GC  + + Y+ LI  LC+ G  ++   +  EMI  G   +  T + L+ GF  +G
Sbjct: 547 DMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAG 606

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           K H A+E  +DM       + V Y+ LI+GLC+ G+++EA  ++ ++ + G +PD + Y+
Sbjct: 607 KVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYN 666

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           ++I  LC  G+ ++A  L      +E    P+  T+NIL+    KQSN
Sbjct: 667 TLICWLCREGAFDDACFLLYR--GVENGFVPNDVTWNILVYNFGKQSN 712



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 154/310 (49%), Gaps = 4/310 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+  LI  +   G  +   ++L  M  +   +    +  +  A  K   + EA+ +F  
Sbjct: 418 NTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGE 477

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M  +  CK  + +FNS++  + +      AL  Y  +V      ++ N++TFN +I    
Sbjct: 478 MSSK-GCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLE---GVIANSVTFNTLIHAFL 533

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G +  A++L  +M  R C  D  TY  L+  LCK   +++ + L +EM   G  P+ +
Sbjct: 534 RRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSII 593

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T N+LING C  G++  A + + +M  +G  P+ VTYN+LI+GLC +G + +A++L +++
Sbjct: 594 TCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKL 653

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            A    P+ +TY T+I  L + G   D   +L    E  F  N+  ++ L+    K+  +
Sbjct: 654 QAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNS 713

Query: 384 EDAMKLWKQM 393
           E     + Q 
Sbjct: 714 EGQTITYAQF 723


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  316 bits (810), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 159/458 (34%), Positives = 274/458 (59%), Gaps = 9/458 (1%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           + A  LF  M     C  ++ ++N++L+ + + G   RA+  +  +++ +  +++    +
Sbjct: 27  DRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDVI----S 81

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           FN+++  +CR G ++ A++ FR+M  R C P++ TY  L+DGLCK NR+ +AV LL+ M+
Sbjct: 82  FNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCKANRVSQAVELLESMK 140

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             GC P  +T+ +L++GLCK  ++  A +++  M   GC+PN VTYN+L+HGLC    + 
Sbjct: 141 ARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVS 200

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A++L+  M    C PN VTYGT+I+GL K+GR  D   +L  M ++    +  IY+ LI
Sbjct: 201 DALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLI 260

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +GL K  + ++++ L ++ +  G KP+ V YS++I GLCR  + DEA  +L  + + GC 
Sbjct: 261 NGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCP 320

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +   YS+L+ G  ++GK  +A ++++ M  + C  + V YS LI GLC+ G++ EA ++
Sbjct: 321 PDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLL 380

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M+  G  P  + Y+S+I GLC+   ++EA++L  EM        P   TYNIL++ +
Sbjct: 381 LARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM--ERSNCAPSAVTYNILIHGM 438

Query: 555 CKQSNI-SHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           C+   + S ++D    M+D G  PD +T +I L  LK+
Sbjct: 439 CRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKK 476



 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 146/457 (31%), Positives = 249/457 (54%), Gaps = 7/457 (1%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C+  V ++NS+++ + +     RA E + H+   K +   P+ +T+N ++  + R G ++
Sbjct: 6   CEPNVVTYNSLIDGLCKNNEPDRAQELFEHM---KSVECSPSMVTYNTLLDGLFRTGKLE 62

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
            A+ LF+EM  R    D+ ++  L+ GLC+  +++ A+    +M  D C P  +T++VLI
Sbjct: 63  RAMALFQEMLDRRSH-DVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLI 120

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           +GLCK   + +A +L+++M  +GC P+ +TY  L+ GLC +  +  A  +L  M+ + C+
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PN VTY ++++GL +  R  D   ++  M  R    N   Y TLI GL K G+ +DA  +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
              M++KG  P+ ++Y+ LI+GLC+  + DE+  +L   ++ G   +  TYSS++ G   
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           S +  +A  +   +    C  + + YS LI GLC+ GK+ EA  ++  M   GC  DVV 
Sbjct: 301 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVT 360

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           YS++I GLC AG V+EA  L   M+     + P   TYN L+  LC  +++  +I+L+  
Sbjct: 361 YSTLIDGLCKAGRVDEAHLLLARMV--RMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           M    C P  VT NI +  +           D+  E+
Sbjct: 419 MERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEM 455



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/453 (30%), Positives = 222/453 (49%), Gaps = 57/453 (12%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M+  GC P  VT+N LI+GLCKN E  RA +L ++M    C P+ VTYNTL+ GL   G 
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 313 LDKAVSLLDRMV---------------------------------ASKCMPNEVTYGTII 339
           L++A++L   M+                                   +C PN +TY  +I
Sbjct: 61  LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLI 120

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +GL K  R      +L SM+ R    +   Y+ L+ GL KE K   A ++ ++M++ GC 
Sbjct: 121 DGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCV 180

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN V Y++L+ GLCR  +  +A  ++ +M   GC  N  TY +L+ G  + G+   A  +
Sbjct: 181 PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAM 240

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
             DM       + + Y++LI+GLC+  ++ E+  +  + +S G KPDVV YSS+I+GLC 
Sbjct: 241 LADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 300

Query: 520 AGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           +  ++EA +L      L  KS+   PDV  Y+ L++ LCK   +  + DL   M   GCD
Sbjct: 301 SNRLDEACRLL-----LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCD 355

Query: 577 PDLVTCNIFLTALKE---------------KLEAPQDGTDFLNELAIRLFKRQRTSGGFK 621
            D+VT +  +  L +               ++  P     + N L   L          +
Sbjct: 356 ADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY-NSLIKGLCDLNHLDEAIE 414

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +VE M +   +P   T+  ++  +CR +R+ +A
Sbjct: 415 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 447



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 185/372 (49%), Gaps = 40/372 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +     KA+ V +A+ L  +M     C   V ++  +++ + +E     A E    
Sbjct: 115 TYSVLIDGLCKANRVSQAVELLESM-KARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 173

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++A     +PN +T+N ++  +CR   V +A+ L R+M  R C P++ TY TL+DGLCK
Sbjct: 174 MLDA---GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCK 230

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R+ +A  +L +M   G  P  + +N+LINGLCK  ++  +  L+      G  P+ VT
Sbjct: 231 VGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVT 290

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+++I+GLC    LD+A  LL  + +  C P+ + Y T+I+GL K G+  +   +   M 
Sbjct: 291 YSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMT 350

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 +   YSTLI GL K G+ ++A  L  +M+  G  P+T+ Y++LI GLC +   D
Sbjct: 351 GDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLD 410

Query: 420 EAEEIL------------------------------------FEMINNGCAANAFTYSSL 443
           EA E++                                     EMI+NG   +  TYS L
Sbjct: 411 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSIL 470

Query: 444 MKGFFESGKGHK 455
           ++G  +S   H+
Sbjct: 471 LEGLKKSKDLHE 482



 Score = 47.8 bits (112), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 6/136 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +     KA  V+EA  L   MV       +  ++NS++  +        A+E    
Sbjct: 360 TYSTLIDGLCKAGRVDEAHLLLARMV-RMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 418

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA-IQLFREMPVRNCEPDIYTYCTLMDGLC 238
           +   +  N  P+ +T+N++I  +CR+  VD+A +  F+EM      PD  TY  L++GL 
Sbjct: 419 M---ERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLK 475

Query: 239 KENRLDEAV-LLLDEM 253
           K   L E   L+LD+M
Sbjct: 476 KSKDLHELRHLVLDQM 491


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  315 bits (807), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 203/598 (33%), Positives = 312/598 (52%), Gaps = 35/598 (5%)

Query: 62  EQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF 121
           + P S E+F        Y      +Y LI     +G+FK+++ +L +M++E  V  E  F
Sbjct: 90  DVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTIDALLMQMKQEGIVFRESLF 149

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           I I K YG+A L  +A RL   M   + C+ T +S+N VL+V++           +  ++
Sbjct: 150 ILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEML 209

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           +     I P   TF +V+K +C +  VD+A  L ++M    C P+   Y TL+  L K  
Sbjct: 210 SK---GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVG 266

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           R++E + LL+EM + GC P   TFN  I+GLCK   +  AAKLVD M L+G  PN  TY 
Sbjct: 267 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 326

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM--SME 359
            L+HGLC  G +D+A  LL+++      PN V + T+ING V  GR +D A+ +M  SM 
Sbjct: 327 VLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGR-LDEAKAVMHESML 381

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 + + Y+TLI GL K+G    A +L  +M  KGC+PN + Y+ LID  C+ G+ +
Sbjct: 382 SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 441

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA  +L EM   G A NA  Y+ L+    +  K   A+ ++ DM+   C  +   ++ LI
Sbjct: 442 EARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 501

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GLC+  K  EA  ++  ML  G   + + Y+++IH     G+++EALKL N+ML    +
Sbjct: 502 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF---R 558

Query: 540 SQP-DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
             P D  TYN L+ ALC+  NI   + L   MM +G +P+ ++CNI +  L  +    Q 
Sbjct: 559 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC-RTGNIQH 617

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             +FL +                    M+ + L+P   T+  ++  LC+  R Q A+N
Sbjct: 618 ALEFLRD--------------------MIHRGLTPDIVTYNSLINGLCKTGRAQEALN 655



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 142/443 (32%), Positives = 234/443 (52%), Gaps = 18/443 (4%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C   V +FN  ++ + +    H A +  + ++        PN+ T+ +++  +CR+G VD
Sbjct: 283 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRML---LRGFTPNSFTYGVLMHGLCRMGKVD 339

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE-MQVDGCFPTPVTFNVL 268
            A  L  ++P     P++  + TL++G     RLDEA  ++ E M   GC P   T+N L
Sbjct: 340 EARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTL 395

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I GLCK G L  A +L++ M +KGC PN +TY  LI   C +G L++A ++LD M     
Sbjct: 396 ILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGL 455

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             N V Y  +I+ L K  +  D   +   M  +    + + +++LI GL K  K E+A+ 
Sbjct: 456 ALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALG 515

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L++ M+ +G   NT+ Y+ LI    R G   EA +++ +M+  GC  +  TY+ L+K   
Sbjct: 516 LYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALC 575

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            +G   K + +++DM       N +  ++LI+GLC  G ++ A      M+ RG  PD+V
Sbjct: 576 RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 635

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            Y+S+I+GLC  G  +EAL LF+++    +C      PD  TYN L++  CK+     + 
Sbjct: 636 TYNSLINGLCKTGRAQEALNLFDKLQVEGIC------PDAITYNTLISWHCKEGMFDDAH 689

Query: 565 DLLNSMMDRGCDPDLVTCNIFLT 587
            LL+  +D G  P+ VT  I ++
Sbjct: 690 LLLSRGVDSGFIPNEVTWYILVS 712



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 182/335 (54%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  T+N +I  +C+ G + +A +L  EM ++ CEP++ TY  L+D  CKE RL+EA  +
Sbjct: 387 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 446

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LDEM   G     V +N LI+ LCK+ ++  A  +  +M  KGC P+  T+N+LI GLC 
Sbjct: 447 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 506

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
               ++A+ L   M+    + N +TY T+I+  ++ G   +  +++  M  R   +++  
Sbjct: 507 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 566

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI  L + G  E  + L++ MM KG  PN +  + LI+GLCR G    A E L +MI
Sbjct: 567 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 626

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   +  TY+SL+ G  ++G+  +A+ ++  +       + + Y+ LI   C++G   
Sbjct: 627 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 686

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +A ++ ++ +  G  P+ V +  ++      G  E
Sbjct: 687 DAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  314 bits (804), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 203/598 (33%), Positives = 311/598 (52%), Gaps = 35/598 (5%)

Query: 62  EQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF 121
           + P S E+F        Y      +Y LI     +G+FK+ + +L +M++E  V  E  F
Sbjct: 108 DVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAAGEFKTTDALLMQMKQEGIVFRESLF 167

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           I I K YG+A L  +A RL   M   + C+ T +S+N VL+V++           +  ++
Sbjct: 168 ILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEML 227

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           +     I P   TF +V+K +C +  VD+A  L ++M    C P+   Y TL+  L K  
Sbjct: 228 SK---GISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVG 284

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           R++E + LL+EM + GC P   TFN  I+GLCK   +  AAKLVD M L+G  PN  TY 
Sbjct: 285 RVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYG 344

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM--SME 359
            L+HGLC  G +D+A  LL+++      PN V + T+ING V  GR +D A+ +M  SM 
Sbjct: 345 VLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGR-LDEAKAVMHESML 399

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 + + Y+TLI GL K+G    A +L  +M  KGC+PN + Y+ LID  C+ G+ +
Sbjct: 400 SVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLE 459

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA  +L EM   G A NA  Y+ L+    +  K   A+ ++ DM+   C  +   ++ LI
Sbjct: 460 EARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLI 519

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GLC+  K  EA  ++  ML  G   + + Y+++IH     G+++EALKL N+ML    +
Sbjct: 520 FGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF---R 576

Query: 540 SQP-DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
             P D  TYN L+ ALC+  NI   + L   MM +G +P+ ++CNI +  L  +    Q 
Sbjct: 577 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLC-RTGNIQH 635

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             +FL +                    M+ + L+P   T+  ++  LC+  R Q A+N
Sbjct: 636 ALEFLRD--------------------MIHRGLTPDIVTYNSLINGLCKTGRAQEALN 673



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/443 (32%), Positives = 234/443 (52%), Gaps = 18/443 (4%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C   V +FN  ++ + +    H A +  + ++        PN+ T+ +++  +CR+G VD
Sbjct: 301 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRML---LRGFTPNSFTYGVLMHGLCRMGKVD 357

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE-MQVDGCFPTPVTFNVL 268
            A  L  ++P     P++  + TL++G     RLDEA  ++ E M   GC P   T+N L
Sbjct: 358 EARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTL 413

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I GLCK G L  A +L++ M +KGC PN +TY  LI   C +G L++A ++LD M     
Sbjct: 414 ILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGL 473

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             N V Y  +I+ L K  +  D   +   M  +    + + +++LI GL K  K E+A+ 
Sbjct: 474 ALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALG 533

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L++ M+ +G   NT+ Y+ LI    R G   EA +++ +M+  GC  +  TY+ L+K   
Sbjct: 534 LYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALC 593

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            +G   K + +++DM       N +  ++LI+GLC  G ++ A      M+ RG  PD+V
Sbjct: 594 RAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIV 653

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            Y+S+I+GLC  G  +EAL LF+++    +C      PD  TYN L++  CK+     + 
Sbjct: 654 TYNSLINGLCKTGRAQEALNLFDKLQVEGIC------PDAITYNTLISWHCKEGMFDDAH 707

Query: 565 DLLNSMMDRGCDPDLVTCNIFLT 587
            LL+  +D G  P+ VT  I ++
Sbjct: 708 LLLSRGVDSGFIPNEVTWYILVS 730



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/335 (31%), Positives = 182/335 (54%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  T+N +I  +C+ G + +A +L  EM ++ CEP++ TY  L+D  CKE RL+EA  +
Sbjct: 405 PDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNV 464

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LDEM   G     V +N LI+ LCK+ ++  A  +  +M  KGC P+  T+N+LI GLC 
Sbjct: 465 LDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCK 524

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
               ++A+ L   M+    + N +TY T+I+  ++ G   +  +++  M  R   +++  
Sbjct: 525 VNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDIT 584

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI  L + G  E  + L++ MM KG  PN +  + LI+GLCR G    A E L +MI
Sbjct: 585 YNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMI 644

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   +  TY+SL+ G  ++G+  +A+ ++  +       + + Y+ LI   C++G   
Sbjct: 645 HRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFD 704

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +A ++ ++ +  G  P+ V +  ++      G  E
Sbjct: 705 DAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 178/588 (30%), Positives = 314/588 (53%), Gaps = 28/588 (4%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFK 126
           ++FN       ++    T+  +I+     G F+++E VL  MR+     +LE  +I I +
Sbjct: 25  KMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMR 84

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
            YG+   V+EA+ +F  M D + C+ +V+S+N+++N++++ G + +A + Y   +  K +
Sbjct: 85  DYGRKGKVQEAVNVFERM-DFYDCEPSVQSYNAIMNILVEYGYFSQAHKVY---MRMKDI 140

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I P+  T  + +K+ C  G    A++L   MP + CE +  +YC ++ G  KEN   EA
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L DEM   G  P  +TFN LI+ LCK G +  + KL   +  +G  PN  T+N  I G
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC KG +D+A  LL+ +V+    P+ ++Y T+I G  K  + V+    L  M       N
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
           E+ Y+T+I+G  K G  ++A K+ +  M KG  P+   YS+LI+GLC  G  + A  + +
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E +  G   +   Y++L+KG  + G   +A+++ KDM ++ C  +   Y+++++GLC+ G
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            L +A  +    +++GC PD+  ++++I G C   ++++A+++ + M  L     PDV T
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM--LSHGITPDVIT 498

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN LLN LCK   + + +D   +M+++GC P+++T NI + +  +  +  +         
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE--------- 549

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           A+ LFK  +T G            L+P   T   ++  LC    +  A
Sbjct: 550 AMELFKEMKTRG------------LTPDIVTLCTLICGLCSNGELDKA 585



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 273/564 (48%), Gaps = 56/564 (9%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+RL + M  +  C+    S+ +V++   +E     A   ++ ++      I P+ LTFN
Sbjct: 165 ALRLLNNMPGQ-GCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQ---GICPDILTFN 220

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I  +C+ G V  + +LF ++  R   P+++T+   + GLC++  +DEA  LL+ +  +
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P  +++N LI G CK+ +L  A   +  M   G  PNE TYNT+I+G C  G +  A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             +L   +    +P+E TY ++INGL   G       V     E+ F  +  +Y+TL+ G
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K+G    A++L K MME GC P+   Y+ +++GLC++G   +A  IL + I  GC  +
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD 460

Query: 437 AFTYSSLMKGFFESGKGHKAVEI-----------------------------------WK 461
            FT+++L+ G+ +     KA+EI                                   +K
Sbjct: 461 IFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFK 520

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            M +  C  N + Y++LI   C+D K+ EA  ++ +M +RG  PD+V   ++I GLC+ G
Sbjct: 521 AMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNG 580

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            +++A +LF   +  E K       +NI++NA C++ N+S +  L + M    C PD  T
Sbjct: 581 ELDKAYELF-VTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYT 639

Query: 582 CNIFLTALKEKLEAPQDGTDFLNELAIRLFKR--------------QRTSGGFKIVEVML 627
             + + +  +        T  L  ++  L                  R S    I+ +M+
Sbjct: 640 YRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMV 699

Query: 628 QKFLSPQ--TSTWERVVQELCRPK 649
           Q  + P+   S +E   +E+  PK
Sbjct: 700 QNGIVPEEVNSIFEADKKEVAAPK 723



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 254/536 (47%), Gaps = 63/536 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF  LI      G+ +  E +  ++   KR V    F F    +   +   ++EA RL  
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVM--KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLE 275

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           ++V E      V S+N+++    +      A  + + +VN+    + PN  T+N +I   
Sbjct: 276 SIVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS---GVEPNEFTYNTIINGF 331

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD------------------ 244
           C+ G++ NA ++ R+   +   PD +TY +L++GLC +  ++                  
Sbjct: 332 CKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391

Query: 245 -----------------EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
                            +A+ L+ +M   GC P   T+N+++NGLCK G L  A  ++++
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILND 451

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
              KGC+P+  T+NTLI G C + N+DKA+ +LD M++    P+ +TY T++NGL K  +
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARK 511

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +      +M E+    N   Y+ LI    K+ K  +AM+L+K+M  +G  P+ V    
Sbjct: 512 LDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS-----LMKGFFESGKGHKAVEIWKD 462
           LI GLC  G+ D+A E LF  I        F+YS+     ++  F E      A +++  
Sbjct: 572 LICGLCSNGELDKAYE-LFVTIEK---EYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHK 627

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M  ++C  +   Y V+I   C+ G +  A     + +S+G  P       +++ LC    
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 523 VEEALKLFNEML--CLEPKSQPDVFTYN--------ILLNALCKQSNIS-HSIDLL 567
           + EA+ + N M+   + P+    +F  +        I++  L K+S+I+ +S +LL
Sbjct: 688 LSEAVVIINLMVQNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELL 743



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 146/311 (46%), Gaps = 13/311 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y K   +++AI +  TM+        V ++N++LN + +       ++ +  
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSH-GITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++        PN +T+N++I++ C+   V  A++LF+EM  R   PDI T CTL+ GLC 
Sbjct: 522 MLEK---GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 240 ENRLDEAVLLLDEMQVDGCFP-TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
              LD+A  L   ++ +  F  +   FN++IN  C+   +  A KL   M    C P+  
Sbjct: 579 NGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNY 638

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY  +I   C  GN+D A + L   ++   +P+  T G ++N L    R  +   ++  M
Sbjct: 639 TYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLM 698

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAM-KLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
                 V   I    ++ +F+  K E A  K+  + + K        Y  L DG+ R  K
Sbjct: 699 ------VQNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELLYDGI-RNRK 751

Query: 418 PDEAEEILFEM 428
             EA  +L+++
Sbjct: 752 VVEARPLLYKV 762


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  313 bits (801), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 178/588 (30%), Positives = 314/588 (53%), Gaps = 28/588 (4%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFK 126
           ++FN       ++    T+  +I+     G F+++E VL  MR+     +LE  +I I +
Sbjct: 25  KMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIMR 84

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
            YG+   V+EA+ +F  M D + C+ +V+S+N+++N++++ G + +A + Y   +  K +
Sbjct: 85  DYGRKGKVQEAVNVFERM-DFYDCEPSVQSYNAIMNILVEYGYFSQAHKVY---MRMKDI 140

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I P+  T  + +K+ C  G    A++L   MP + CE +  +YC ++ G  KEN   EA
Sbjct: 141 GIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEA 200

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L DEM   G  P  +TFN LI+ LCK G +  + KL   +  +G  PN  T+N  I G
Sbjct: 201 YHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQG 260

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC KG +D+A  LL+ +V+    P+ ++Y T+I G  K  + V+    L  M       N
Sbjct: 261 LCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPN 320

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
           E+ Y+T+I+G  K G  ++A K+ +  M KG  P+   YS+LI+GLC  G  + A  + +
Sbjct: 321 EFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFY 380

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E +  G   +   Y++L+KG  + G   +A+++ KDM ++ C  +   Y+++++GLC+ G
Sbjct: 381 EAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMG 440

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            L +A  +    +++GC PD+  ++++I G C   ++++A+++ + M  L     PDV T
Sbjct: 441 CLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTM--LSHGITPDVIT 498

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN LLN LCK   + + +D   +M+++GC P+++T NI + +  +  +  +         
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSE--------- 549

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           A+ LFK  +T G            L+P   T   ++  LC    +  A
Sbjct: 550 AMELFKEMKTRG------------LTPDIVTLCTLICGLCSNGELDKA 585



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 159/564 (28%), Positives = 272/564 (48%), Gaps = 56/564 (9%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+RL + M  +  C+    S+ +V++   +E     A   ++ ++      I P+ LTFN
Sbjct: 165 ALRLLNNMPGQ-GCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQ---GICPDILTFN 220

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I  +C+ G V  + +LF ++  R   P+++T+   + GLC++  +DEA  LL+ +  +
Sbjct: 221 KLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSE 280

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P  +++N LI G CK+ +L  A   +  M   G  PNE TYNT+I+G C  G +  A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             +L   +    +P+E TY ++INGL   G       V     E+ F  +  +Y+TL+ G
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKG 400

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K+G    A++L K MME GC P+   Y+ +++GLC++G   +A  IL + I  GC  +
Sbjct: 401 LSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPD 460

Query: 437 AFTYSSLMKGFFESGKGHKAVEI-----------------------------------WK 461
            FT+++L+ G+ +     KA+EI                                   +K
Sbjct: 461 IFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFK 520

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            M +  C  N + Y++LI   C+D K+ EA  ++ +M +RG  PD+V   ++I GLC+ G
Sbjct: 521 AMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNG 580

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            +++A +LF  +   E K       +NI++NA C + N+S +  L + M    C PD  T
Sbjct: 581 ELDKAYELFVTIE-KEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYT 639

Query: 582 CNIFLTALKEKLEAPQDGTDFLNELAIRLFKR--------------QRTSGGFKIVEVML 627
             + + +  +        T  L  ++  L                  R S    I+ +M+
Sbjct: 640 YRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMV 699

Query: 628 QKFLSPQ--TSTWERVVQELCRPK 649
           Q  + P+   S +E   +E+  PK
Sbjct: 700 QNGIVPEEVNSIFEADKKEVAAPK 723



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 143/536 (26%), Positives = 253/536 (47%), Gaps = 63/536 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF  LI      G+ +  E +  ++   KR V    F F    +   +   ++EA RL  
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVM--KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLE 275

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           ++V E      V S+N+++    +      A  + + +VN+    + PN  T+N +I   
Sbjct: 276 SIVSE-GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS---GVEPNEFTYNTIINGF 331

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD------------------ 244
           C+ G++ NA ++ R+   +   PD +TY +L++GLC +  ++                  
Sbjct: 332 CKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391

Query: 245 -----------------EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
                            +A+ L+ +M   GC P   T+N+++NGLCK G L  A  ++++
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILND 451

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
              KGC+P+  T+NTLI G C + N+DKA+ +LD M++    P+ +TY T++NGL K  +
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARK 511

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +      +M E+    N   Y+ LI    K+ K  +AM+L+K+M  +G  P+ V    
Sbjct: 512 LDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS-----LMKGFFESGKGHKAVEIWKD 462
           LI GLC  G+ D+A E LF  I        F+YS+     ++  F        A +++  
Sbjct: 572 LICGLCSNGELDKAYE-LFVTIEK---EYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHK 627

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M  ++C  +   Y V+I   C+ G +  A     + +S+G  P       +++ LC    
Sbjct: 628 MGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHR 687

Query: 523 VEEALKLFNEML--CLEPKSQPDVFTYN--------ILLNALCKQSNIS-HSIDLL 567
           + EA+ + N M+   + P+    +F  +        I++  L K+S+I+ +S +LL
Sbjct: 688 LSEAVVIINLMVQNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELL 743



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 12/295 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y K   +++AI +  TM+        V ++N++LN + +       ++ +  
Sbjct: 463 TFNTLIDGYCKQRNMDKAIEILDTMLSH-GITPDVITYNTLLNGLCKARKLDNVVDTFKA 521

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++        PN +T+N++I++ C+   V  A++LF+EM  R   PDI T CTL+ GLC 
Sbjct: 522 MLEK---GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCS 578

Query: 240 ENRLDEAVLLLDEMQVDGCFP-TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
              LD+A  L   ++ +  F  +   FN++IN  C    +  A KL   M    C P+  
Sbjct: 579 NGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNY 638

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY  +I   C  GN+D A + L   ++   +P+  T G ++N L    R  +   ++  M
Sbjct: 639 TYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLM 698

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAM-KLWKQMMEKGCKPNTVVYSALIDGL 412
                 V   I    ++ +F+  K E A  K+  + + K        Y  L DG+
Sbjct: 699 ------VQNGIVPEEVNSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELLYDGI 747


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 199/631 (31%), Positives = 313/631 (49%), Gaps = 53/631 (8%)

Query: 64  PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF 123
           P S E+F        Y       Y LI      GDFK +E +L +M+ E  +  E  FI 
Sbjct: 80  PTSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFIL 139

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I K YGKA L  +A RL   M   + C  T KS+N VL++++       A   +  +++ 
Sbjct: 140 IMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSR 199

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               + P   TF +V+K +C +  VD+A  L R+M    C P+   Y TL+  LC+ NR+
Sbjct: 200 ---GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRV 256

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA+ LL++M +  C P   TFN +I+GLC+ G +  AAKL+D M L+G   + +TY  L
Sbjct: 257 SEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYL 316

Query: 304 IHGLCLKGNLDKAVSLLDR--------------------------------MVASKCMPN 331
           +HGLC  G +D+A +LL++                                MV +   P+
Sbjct: 317 MHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPD 376

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             T+  +I+GLVK G  V    +L  M  ++F  N   Y+ LI+G  K+G+ E+A ++  
Sbjct: 377 AYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVN 436

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M  KG   NTV Y+ LI  LC+ G  +EA ++  EM   GC  + +T++SL+ G  ++ 
Sbjct: 437 SMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNH 496

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           K  +A+ ++ DM     + N V Y+ L+H       +++A  +  +ML RGC  D + Y+
Sbjct: 497 KMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYN 556

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +I  LC  G+VE+ L LF EM  L     P + + NIL++ LC+   ++ ++  L  M+
Sbjct: 557 GLIKALCKTGAVEKGLGLFEEM--LGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMI 614

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL---AIR--------LFKRQRTSGGF 620
            RG  PD+VT N  +  L  K+   Q+ ++  N+L    IR        L  R    G F
Sbjct: 615 HRGLTPDIVTYNSLINGLC-KMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMF 673

Query: 621 KIVEVMLQKFLS----PQTSTWERVVQELCR 647
               ++L K +     P   TW  ++  + +
Sbjct: 674 NDACLLLYKGVDSGFIPNEVTWSILINYIVK 704



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 222/456 (48%), Gaps = 38/456 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA++L   M     C+  V++FN V++ + + G  H A +  + ++         + L
Sbjct: 256 VSEALQLLEDMF-LMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRML---LRGFSTDAL 311

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNC------------------------------ 223
           T+  ++  +CR+G VD A  L  ++P  N                               
Sbjct: 312 TYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIA 371

Query: 224 --EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
             EPD YT+  ++DGL K+  L  A+ LL+EM      P  +T+ +LING CK G L  A
Sbjct: 372 GYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEA 431

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
           A++V++M  KG   N V YN LI  LC  GN+++A+ L   M    C P+  T+ ++ING
Sbjct: 432 AEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLING 491

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L K  +  +   +   M       N   Y+TL+         + A KL  +M+ +GC  +
Sbjct: 492 LCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLD 551

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            + Y+ LI  LC+ G  ++   +  EM+  G      + + L+ G   +GK + A++  +
Sbjct: 552 NITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQ 611

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           DM       + V Y+ LI+GLC+ G ++EA  ++ ++ S G +PD + Y+++I   C+ G
Sbjct: 612 DMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEG 671

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
              +A  L  +   ++    P+  T++IL+N + K+
Sbjct: 672 MFNDACLLLYKG--VDSGFIPNEVTWSILINYIVKK 705



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 151/296 (51%), Gaps = 4/296 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  +   G  +    ++  M  +   +    +  +  A  K   +EEA++LF  M
Sbjct: 414 TYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEM 473

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +  CK  + +FNS++N + +      AL  Y+ +       ++ NT+T+N ++     
Sbjct: 474 SGK-GCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLE---GVIANTVTYNTLVHAFLM 529

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +  A +L  EM  R C  D  TY  L+  LCK   +++ + L +EM   G FPT ++
Sbjct: 530 RDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIIS 589

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            N+LI+GLC+ G++  A K + +M  +G  P+ VTYN+LI+GLC  G++ +A +L +++ 
Sbjct: 590 CNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQ 649

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           +    P+ +TY T+I+     G   D   +L    +  F  NE  +S LI+ + K+
Sbjct: 650 SEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  308 bits (789), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 181/506 (35%), Positives = 266/506 (52%), Gaps = 43/506 (8%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +    GK   V+EA  LF     +  C  TV ++N++++ + + G    AL  Y+ +  A
Sbjct: 36  LIDGLGKQRRVKEAYDLFEEARAK-GCHPTVVTYNTMIDGLCKCGRIENALTLYDDM--A 92

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
            H    P  +T++ +I  +CR   VD   +L  EM  R C P+  TY TL++ L  + R 
Sbjct: 93  IHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRS 152

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL------------- 290
            EA  LL++M  +GC P  +TF ++I GLCK GE+  A ++VD MF+             
Sbjct: 153 KEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFN 212

Query: 291 ------------------------KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
                                   +GC PN VTY+TLI GL     +D+A+ LL +MV  
Sbjct: 213 SVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVEL 272

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
            C  N VTY T+++GL+K+GR  D   VL  M +     +   Y+TLI G FK  +  +A
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 332

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           + L ++M+E G  P+ V Y+ L  GLCR G+ DEA EIL  M   GCA NA TYSS++ G
Sbjct: 333 VGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDG 392

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEV-CYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
             ++G+  +A+  ++ MA++  V   V  YS LI GLC+ GK+ EA     +M+  G  P
Sbjct: 393 LCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIP 452

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           DVV +S +I+GLC+AG ++  L+LF  M   E    PD+ TY  L++ LC+ S +  + D
Sbjct: 453 DVVTFSILINGLCDAGRIDTGLELFRGM--AERGCVPDMVTYATLVDRLCRASRVDEAFD 510

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKE 591
           L   M   G  PD  T    +  L E
Sbjct: 511 LFQQMRSDGLSPDRSTRRTMIHGLLE 536



 Score =  308 bits (788), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 173/530 (32%), Positives = 282/530 (53%), Gaps = 29/530 (5%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K+  V++AI LF  MVD+      V ++ ++++ +   G   R  E Y+    A+     
Sbjct: 7   KSRKVDKAITLFKQMVDK-AIYPDVVTYGALIDGL---GKQRRVKEAYDLFEEARAKGCH 62

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVL 248
           P  +T+N +I  +C+ G ++NA+ L+ +M +     P + TY TL+DGLC+++ +D+   
Sbjct: 63  PTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCK 122

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LL+EM   GC P  VT+N L+N L   G    A  L++ M   GC P  +T+  +I GLC
Sbjct: 123 LLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLC 182

Query: 309 LKGNLDKAVSLLDR--MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            +G ++ A  ++D   M+ S   P+ +T+ ++++GL K  R +D   V     ER    N
Sbjct: 183 KEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPN 242

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              YSTLI GL K  K ++A++L  +M+E GC+ NTV YS ++DGL +VG+ ++A  +L 
Sbjct: 243 VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 302

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +M + GC  +A TY++L+ GFF+  +  +AV + ++M +     + V Y+ L HGLC  G
Sbjct: 303 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG 362

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           +  EA  +   M +RGC P+ + YSS++ GLC AG V EAL  F +M   +    P V  
Sbjct: 363 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM-ARDEVVAPHVIA 421

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           Y+ L++ LCK   I  + + L  M+  G  PD+VT +I +  L +               
Sbjct: 422 YSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDA-------------- 467

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                   R   G ++   M ++   P   T+  +V  LCR  R+  A +
Sbjct: 468 -------GRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFD 510



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/399 (33%), Positives = 217/399 (54%), Gaps = 3/399 (0%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +EA  L   M     C   + +F  ++  + +EG    A    + +   +   + P+ +T
Sbjct: 153 KEAFSLLEQMAAN-GCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIES-GLSPDVIT 210

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           FN V+  +C+   + +A  +F+    R C P++ TY TL+DGL K  ++DEA+ LL +M 
Sbjct: 211 FNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 270

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             GC    VT++ +++GL K G +  A  ++  M   GCLP+ VTYNTLI G   +  L 
Sbjct: 271 ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR 330

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +AV LL  M+ +   P+ VTY T+ +GL + GR  +   +L  M  R    N   YS+++
Sbjct: 331 EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 390

Query: 375 SGLFKEGKAEDAMKLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
            GL K G+  +A+  +++M  ++   P+ + YSALIDGLC+ GK DEA E L  MI  G 
Sbjct: 391 DGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGR 450

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  T+S L+ G  ++G+    +E+++ MA+  CV + V Y+ L+  LC   ++ EA  
Sbjct: 451 IPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFD 510

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           ++ QM S G  PD     +MIHGL      E+A ++ +E
Sbjct: 511 LFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 138/272 (50%), Gaps = 7/272 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +++      G  +   +VL +MR    +    ++  +   + K   + EA+ L   M
Sbjct: 280 TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 339

Query: 145 VDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           ++  FH   +V ++ ++ + + + G +  A+E  +++         PN +T++ ++  +C
Sbjct: 340 LEAGFH--PSVVTYTTLCHGLCRSGRFDEAVEILDYMA---ARGCAPNAITYSSIVDGLC 394

Query: 204 RLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           + G V  A+  F +M       P +  Y  L+DGLCK  ++DEA   L+ M   G  P  
Sbjct: 395 KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDV 454

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VTF++LINGLC  G +    +L   M  +GC+P+ VTY TL+  LC    +D+A  L  +
Sbjct: 455 VTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQ 514

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           M +    P+  T  T+I+GL+++ R  D  R+
Sbjct: 515 MRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  306 bits (784), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 184/581 (31%), Positives = 302/581 (51%), Gaps = 31/581 (5%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           +  +++     G F S+  VL  M+     +   +F+ + ++Y K  L +EA+ +   M 
Sbjct: 108 YEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIME 167

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN--ILPNTLTFNLVIKTVC 203
           +EF  K    ++N +LNV++ +G   + +E    IVN++ ++  I P+  TFN++IK +C
Sbjct: 168 EEFGLKLDAFTYNFLLNVLV-DGNKLKLVE----IVNSRMVSRGIKPDVTTFNILIKALC 222

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R   +  AI +  EM      PD  T+ TLM G  +E  ++ A+ + ++M   GC  + V
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV 282

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T NVL++G CK G +      +D M  +G  P+  T+N+L++GLC  G++  A+ +LD M
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +     P+  TY ++I GL KLG   +   +L  M  R F  N   Y+TLIS L KE + 
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E+A +L + +  KG  P+   +++LI GLC       A E+  EM   GC  + FTY+ L
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +      G+  +A+ + K+M  + C  N V Y+ LI G C++ ++ EA  ++ +M  +G 
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             +VV Y+++I GLC    VEEA +L ++ML    K  PD FTYN LL   C+  +I  +
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLK--PDKFTYNSLLTYFCRAGDIKKA 580

Query: 564 IDLLNSMMDRGCDPDLVTCNIFL------------------TALKEKLEAPQDGTDFLNE 605
            D++ +M   GC+PD VT    +                    LK  + APQ      N 
Sbjct: 581 ADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQT----YNP 636

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
           +   LF+ +RTS   ++   M++K   P   T++ V + LC
Sbjct: 637 VIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLC 677



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 158/504 (31%), Positives = 255/504 (50%), Gaps = 11/504 (2%)

Query: 75  KLGSYQLG--DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH 132
           ++GSY L   + TF +L+Q +   G+      +  +M          +   +   Y K  
Sbjct: 236 EMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEG 295

Query: 133 LVEEAIRLFHTMVDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
            +EE +     M +E F   R   +FNS++N + + G    ALE  + ++        P+
Sbjct: 296 RIEEVLSFIDEMSNEGFRPDRF--TFNSLVNGLCRIGHVKHALEILDVMLQE---GFDPD 350

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             T+N +I  +C+LG V+ A+++  +M +R+  P+  TY TL+  LCKEN+++EA  L  
Sbjct: 351 IFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELAR 410

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            +   G  P   TFN LI GLC       A +L + M  KGC P+E TYN LI  LC +G
Sbjct: 411 VLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRG 470

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            L++A+SLL  M +S C  N VTY T+I+G  K  R  +   +   ME +    N   Y+
Sbjct: 471 RLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYN 530

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           TLI GL K  + E+A +L  QM+ +G KP+   Y++L+   CR G   +A +I+  M +N
Sbjct: 531 TLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSN 590

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           GC  ++ TY +L+ G  ++G+   A  + + +     V     Y+ +I  L  + +  EA
Sbjct: 591 GCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEA 650

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS-VEEALKLFNEMLCLEPKSQPDVFTYNIL 550
             ++ +M+ +G  PD V Y  +  GLC+ G  + EA+    EM   +    PD  ++ +L
Sbjct: 651 VRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEM--TDKGFLPDFSSFLML 708

Query: 551 LNALCKQSNISHSIDLLNSMMDRG 574
              LC  S     I L+N +M + 
Sbjct: 709 AEGLCALSMEDTLIKLVNRVMKQA 732



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 129/296 (43%), Gaps = 28/296 (9%)

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
           F  +  IY  ++  L K+G      ++ ++M   GC+     +  LI+   +    DEA 
Sbjct: 101 FVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAV 160

Query: 423 EILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIH 480
            ++  M    G   +AFTY+ L+    + G   K VEI      +  +  +V  +++LI 
Sbjct: 161 AVVDIMEEEFGLKLDAFTYNFLLNVLVD-GNKLKLVEIVNSRMVSRGIKPDVTTFNILIK 219

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE-PK 539
            LC   ++R A ++  +M S G  PD   +++++ G    G++  AL++  +M+    P 
Sbjct: 220 ALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPS 279

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
           S     T N+L++  CK+  I   +  ++ M + G  PD  T                  
Sbjct: 280 SN---VTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFT------------------ 318

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
               N L   L +        +I++VMLQ+   P   T+  ++  LC+   ++ A+
Sbjct: 319 ---FNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAV 371



 Score = 43.5 bits (101), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 38/179 (21%), Positives = 76/179 (42%), Gaps = 11/179 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+ ++  +GD K    ++  M          ++  +     KA  VE A RL  T+
Sbjct: 563 TYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTV 622

Query: 145 VDEFHCKRTV---KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
                 K  V   +++N V+  + +E     A+  +  ++        P+ +T+ +V + 
Sbjct: 623 ----QLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDP---PDAVTYKVVFRG 675

Query: 202 VCRLG-LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           +C  G  +  A+    EM  +   PD  ++  L +GLC  +  D  + L++ +     F
Sbjct: 676 LCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANF 734


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  303 bits (777), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 180/593 (30%), Positives = 299/593 (50%), Gaps = 21/593 (3%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +FN   K  ++    S +  +++    +G F+ +  VL  M+          F+   ++Y
Sbjct: 83  VFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESY 142

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           GK  L +E + +   M DE+  K   + +N +LNV++           ++ +V  +   I
Sbjct: 143 GKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRR---I 199

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
             +  TFN++IK +C+   V  AI +  EMP     PD  T+ T+M G  +   LD A+ 
Sbjct: 200 RHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALR 259

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           + ++M   GC  T VT NVLING CK G + +A   +     +G  P++ TYNTL++GLC
Sbjct: 260 IKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLC 319

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G+   A+ ++D M+     P+  TY ++I+GL KLG   +  ++L  M  R    N  
Sbjct: 320 KIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAV 379

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ +IS L KE + ++A ++ + +  KG  P+   +++LI GLC       A ++  EM
Sbjct: 380 TYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM 439

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              GC  + FTY+ L+     S K  +A+ + K+M  N C  N V Y+ LI G C++ ++
Sbjct: 440 KGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRI 499

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EA  ++ +M  +G   D V Y+++I GLC +  VE+A +L ++M+      +PD FTYN
Sbjct: 500 EEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIM--EGLRPDKFTYN 557

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            LL   CK  +I  + D++ +M   GC+PD+VT    ++ L  K    Q  +  L  + +
Sbjct: 558 SLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC-KAGRVQVASRLLRSIQM 616

Query: 609 R---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
           +               LFKR RT    ++   ML K   P   T++ V + LC
Sbjct: 617 KGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLC 669



 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 162/570 (28%), Positives = 275/570 (48%), Gaps = 43/570 (7%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           STF  LI+    +   +   +++  M        E +F  I + Y +   ++ A+R+   
Sbjct: 204 STFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQ 263

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------------YNHIVN------ 182
           MV E+ C  T  + N ++N   ++G   +AL F               YN +VN      
Sbjct: 264 MV-EYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIG 322

Query: 183 -AKH-MNIL---------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            AKH M ++         P+  T+N +I  +C+LG ++ A+++  +M  R+C P+  TY 
Sbjct: 323 HAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYN 382

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            ++  LCKENR+DEA  +   +   G  P   TFN LI GLC +     A  L + M  K
Sbjct: 383 AIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK 442

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           GC P+E TYN LI  LC    L++A++LL  M  + C  N V Y T+I+G  K  R  + 
Sbjct: 443 GCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEA 502

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +   ME +    +   Y+TLI GL K  + EDA +L  QM+ +G +P+   Y++L+  
Sbjct: 503 EEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTH 562

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C+ G   +A +I+  M ++GC  +  TY++L+ G  ++G+   A  + + +     V  
Sbjct: 563 FCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLT 622

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS-VEEALKLF 530
              Y+ +I  L +  +  EA  ++ +ML +   PD + Y  +  GLCN G  + EA+   
Sbjct: 623 PHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFT 682

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG--CDPDLVTCNIFLTA 588
            EM  +E  + P+  ++ +L   LC  S     + L++ +M++    + ++ T   FL  
Sbjct: 683 VEM--IERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREISTIRGFL-- 738

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
              K+   QD    L  +   ++ R+   G
Sbjct: 739 ---KIRKFQDALSTLGGILDDMYPRRSYRG 765



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 175/378 (46%), Gaps = 17/378 (4%)

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           +P+   Y  ++  L   G+ +    +L+ M  S C  +   +   +    K     +   
Sbjct: 94  VPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVG 153

Query: 354 VLMSME-ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           ++  ME E +   +   Y+ L++ L    K +        M+ +  + +   ++ LI  L
Sbjct: 154 IVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKAL 213

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+  +   A  ++ EM + G + +  T++++M+G+ E G    A+ I + M +  C   +
Sbjct: 214 CKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTD 273

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V  +VLI+G C+ G++ +A     + +S G +PD   Y+++++GLC  G  + A+++ + 
Sbjct: 274 VTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDA 333

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--K 590
           ML       PD++TYN L++ LCK   I  ++ +L+ M+ R C P+ VT N  +++L  +
Sbjct: 334 MLL--GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKE 391

Query: 591 EKLEAPQDGTDFL------------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
            +++   +    L            N L   L           + E M  K   P   T+
Sbjct: 392 NRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTY 451

Query: 639 ERVVQELCRPKRIQAAIN 656
             ++  LC  ++++ A+N
Sbjct: 452 NMLIDSLCSSRKLEEALN 469



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 159/365 (43%), Gaps = 29/365 (7%)

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK---CMPNEVTYGTIINGLVKLGRAVD 350
           LP + T   LI    L+   D+  +L     ASK    +P+   Y  I+  L K G    
Sbjct: 58  LPPDFTPKQLIE--TLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEY 115

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM-EKGCKPNTVVYSALI 409
             RVL  M+      +  I+   +    K    ++ + + K M  E   KP+T  Y+ L+
Sbjct: 116 MRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLL 175

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           + L    K    E     M+      +  T++ L+K   ++ +   A+ + ++M      
Sbjct: 176 NVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLS 235

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +E  ++ ++ G  E G L  A  +  QM+  GC    V  + +I+G C  G +++AL  
Sbjct: 236 PDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSF 295

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             E   +    +PD FTYN L+N LCK  +  H+++++++M+  G DPD+ T N  ++ L
Sbjct: 296 IQE--AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGL 353

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
            +  E  +                       KI++ M+ +  SP   T+  ++  LC+  
Sbjct: 354 CKLGEIEE---------------------AVKILDQMVSRDCSPNAVTYNAIISSLCKEN 392

Query: 650 RIQAA 654
           R+  A
Sbjct: 393 RVDEA 397



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/329 (20%), Positives = 135/329 (41%), Gaps = 25/329 (7%)

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVL-MSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           +P + T   +I  L +    V   RV   + ++  F  +  +Y  ++  L K G  E   
Sbjct: 58  LPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMR 117

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN-GCAANAFTYSSLMKG 446
           ++ ++M   GC+ +  ++   ++   +    DE   I+  M +      +   Y+ L+  
Sbjct: 118 RVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNV 177

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             ++ K          M +    ++   +++LI  LC+  ++R A ++  +M S G  PD
Sbjct: 178 LVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPD 237

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
              +++++ G    G+++ AL++  +M+  E        T N+L+N  CKQ  I  ++  
Sbjct: 238 ETTFTTIMQGYIEGGNLDGALRIKEQMV--EYGCPCTDVTVNVLINGFCKQGRIDQALSF 295

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           +   +  G  PD  T N  +  L                      K        ++V+ M
Sbjct: 296 IQEAVSEGFRPDQFTYNTLVNGL---------------------CKIGHAKHAMEVVDAM 334

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           L   L P   T+  ++  LC+   I+ A+
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEEAV 363


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  303 bits (775), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 187/598 (31%), Positives = 308/598 (51%), Gaps = 26/598 (4%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           S E+F+ T     Y+     +  LI    ++G+FK+++ +L +M+ E  V  E  FI I 
Sbjct: 88  SMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLFISIM 147

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           + Y KA    +  RL   M + + C+ T KS+N VL +++    +  A   +  +++ K 
Sbjct: 148 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK- 206

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             I P   TF +V+K +C +  VD+A+ + R+M    C P+   Y TL+  L K NR++E
Sbjct: 207 --IPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 264

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ LL+EM + GC P   TFN +I GLCK   +  AAK+V+ M ++G  P+++TY  L++
Sbjct: 265 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMN 324

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  G +D A  L  R+      P  V + T+I+G V  GR  D   VL  M      V
Sbjct: 325 GLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 380

Query: 366 NEY-IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y++LI G +K+G    A+++ + M  KGCKPN   Y+ L+DG C++GK DEA  +
Sbjct: 381 PDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNL 440

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L EM  +G   N   ++ L+  F +  +  +AVEI+++M +  C  +   ++ LI GLCE
Sbjct: 441 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 500

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             +++ A  +   M+S G   + V Y+++I+     G ++EA KL NEM+     S  D 
Sbjct: 501 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF--QGSLLDE 558

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            TYN L+  LC+   +  +  L   M+  G  P  ++CNI +  L       ++  +F  
Sbjct: 559 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRS-GMVEEAVEFQK 617

Query: 605 ELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           E+ +R               L +  R   G  +   +  + + P T T+  ++  LC+
Sbjct: 618 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCK 675



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 222/443 (50%), Gaps = 44/443 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++ ++     K   V+ A  LF+ +      K T   FN++++  +  G    A    + 
Sbjct: 318 TYGYLMNGLCKIGRVDAAKDLFYRIP-----KPTSVIFNTLIHGFVTHGRLDDAKAVLSD 372

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V +    I+P+  T+N +I    + GLV  A+++ R+M  + C+P++Y+Y  L+DG CK
Sbjct: 373 MVTS--YGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCK 430

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             ++DEA  LL+EM  DG  P  V FN LI+  CK   +  A ++   M  KGC P+  T
Sbjct: 431 LGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 490

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +N+LI GLC    +  A+ LL  M++   + N VTY T+IN  ++ G   +  +++  M 
Sbjct: 491 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 550

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +   ++E  Y++LI GL + G+ + A  L+++M+  G  P+++  + LI+GLCR G  +
Sbjct: 551 FQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVE 610

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA E   EM+  G   +  T++SL+ G                                 
Sbjct: 611 EAVEFQKEMVLRGSTPDIVTFNSLING--------------------------------- 637

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
             LC  G++ +   ++ ++ + G  PD V Y++++  LC  G V +A  L +E   +E  
Sbjct: 638 --LCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDE--GIEDG 693

Query: 540 SQPDVFTYNILLNALCKQSNISH 562
             P+  T++ILL +L  Q  +  
Sbjct: 694 FVPNDRTWSILLQSLVPQETLDR 716



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 134/252 (53%), Gaps = 5/252 (1%)

Query: 64  PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF 123
           P + EIF   P+ G  +    TF SLI       + K    +L  M  E  V    ++  
Sbjct: 470 PEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A+ +   ++EA +L + MV +      + ++NS++  + + G   +A   +  ++  
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRD 587

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               ++P++++ N++I  +CR G+V+ A++  +EM +R   PDI T+ +L++GLC+  R+
Sbjct: 588 ---GLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           ++ + +  ++Q +G  P  VT+N L++ LCK G +  A  L+D     G +PN+ T++ L
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSIL 704

Query: 304 IHGLCLKGNLDK 315
           +  L  +  LD+
Sbjct: 705 LQSLVPQETLDR 716


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  302 bits (773), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 166/518 (32%), Positives = 279/518 (53%), Gaps = 53/518 (10%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +     K   +++A+ + H M D   C+  V ++NS+++ + +     RA E + H+
Sbjct: 82  YTALLSGLWKEKRLDQALAILHEMRDH-GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 140

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-------CEPDIYTYCTL 233
              K +   P+ +T+N ++  + R G ++ A+ LF+EM  R        C P++ TY  L
Sbjct: 141 ---KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVL 197

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +DGLCK NR+ +AV LL+ M+  GC P  +T+ +L++GLCK  ++  A +++  M   GC
Sbjct: 198 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 257

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           +PN VTYN+L+HGLC    +  A++L+  M    C PN VTYGT+I+GL K+GR  D   
Sbjct: 258 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 317

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +L  M ++    +  IY+ LI+GL K  + ++++ L ++ +  G KP+ V YS++I GLC
Sbjct: 318 MLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLC 377

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           R  + DEA  +L  + + GC  +   YS+L+ G  ++GK  +A ++++ MA + C  + V
Sbjct: 378 RSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVV 437

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            YS LI GLC+ G++ EA ++  +M+  G  P  + Y+S+I GLC+   ++EA++L  EM
Sbjct: 438 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497

Query: 534 LCLEPKSQPDVFTYNI----------------------------------------LLNA 553
                   P   TYNI                                        L++ 
Sbjct: 498 --ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDG 555

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           LCK   ++ ++D    M+D G  PD +T +I L  LK+
Sbjct: 556 LCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKK 593



 Score =  281 bits (719), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 173/532 (32%), Positives = 274/532 (51%), Gaps = 54/532 (10%)

Query: 77  GSYQLGDSTFYS-LIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAH 132
           GS  + D+  Y+ L+              +L+ MR    E  VV   S I       K +
Sbjct: 72  GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLI---DGLCKNN 128

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI---- 188
             + A  LF  M     C  ++ ++N++L+ + + G   RA+  +  +++ +  ++    
Sbjct: 129 EPDRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN +T++++I  +C+   V  A++L   M  R C PD+ TY  L+DGLCKE+++  A  
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L EM   GC P  VT+N L++GLC+   +  A  L+ +M  +GC PN VTY TLI GLC
Sbjct: 248 VLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLC 307

Query: 309 LKG-----------------------------------NLDKAVSLLDRMVASKCMPNEV 333
             G                                    +D++++LL R V+    P+ V
Sbjct: 308 KVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 367

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY ++I GL +  R  +  R+L+ ++ R    +  +YSTLI GL K GK ++A  L++ M
Sbjct: 368 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 427

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
              GC  + V YS LIDGLC+ G+ DEA  +L  M+  G   +  TY+SL+KG  +    
Sbjct: 428 AGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHL 487

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-----GCKPDVV 508
            +A+E+ ++M ++NC  + V Y++LIHG+C   ++  A ++  Q  +R     G   D +
Sbjct: 488 DEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTI 547

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           AYSS+I GLC AG V EAL  F EM+  +    PD  TY+ILL  L K  ++
Sbjct: 548 AYSSLIDGLCKAGRVAEALDYFQEMI--DNGVIPDHITYSILLEGLKKSKDL 597



 Score =  277 bits (709), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 166/531 (31%), Positives = 275/531 (51%), Gaps = 34/531 (6%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C+  V ++ ++L    + G   +A   ++ +   +  N++PN    +++I  +C+     
Sbjct: 5   CQPDVYTYAALLRGFCRGGEIDQAQRCFDEM---RSKNLVPNVFLCSILIDGLCKAKRSI 61

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +A++ FR M       D   Y  L+ GL KE RLD+A+ +L EM+  GC P  VT+N LI
Sbjct: 62  DALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLI 121

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV----- 324
           +GLCKN E  RA +L ++M    C P+ VTYNTL+ GL   G L++A++L   M+     
Sbjct: 122 DGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH 181

Query: 325 --ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
               +C PN +TY  +I+GL K  R      +L SM+ R    +   Y+ L+ GL KE K
Sbjct: 182 DMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 241

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A ++ ++M++ GC PN V Y++L+ GLCR  +  +A  ++ +M   GC  N  TY +
Sbjct: 242 VAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGT 301

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G  + G+   A  +  DM       + + Y++LI+GLC+  ++ E+  +  + +S G
Sbjct: 302 LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSN 559
            KPDVV YSS+I+GLC +  ++EA +L      L  KS+   PDV  Y+ L++ LCK   
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLL-----LYVKSRGCPPDVILYSTLIDGLCKAGK 416

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE---------------KLEAPQDGTDFLN 604
           +  + DL   M   GCD D+VT +  +  L +               ++  P     + N
Sbjct: 417 VDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY-N 475

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            L   L          ++VE M +   +P   T+  ++  +CR +R+ +A+
Sbjct: 476 SLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAV 526



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 175/331 (52%), Gaps = 9/331 (2%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +A  V +A+ L   M     C   V ++ ++++ + + G    A      +++       
Sbjct: 273 RARRVSDALALMRDMTCR-GCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGT--- 328

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ + +N++I  +C+   VD +I L R       +PD+ TY +++ GLC+ NRLDEA  L
Sbjct: 329 PDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRL 388

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  ++  GC P  + ++ LI+GLCK G++  A  L + M   GC  + VTY+TLI GLC 
Sbjct: 389 LLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCK 448

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +D+A  LL RMV     P+ +TY ++I GL  L    +   ++  ME      +   
Sbjct: 449 AGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVT 508

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEK-----GCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           Y+ LI G+ +  + + A+ L +Q   +     G   +T+ YS+LIDGLC+ G+  EA + 
Sbjct: 509 YNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDY 568

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
             EMI+NG   +  TYS L++G  +S   H+
Sbjct: 569 FQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 89/204 (43%), Gaps = 45/204 (22%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  V+EA  L+  M  +  C   V +++++++ + + G   R  E +  +     M   
Sbjct: 413 KAGKVDEAFDLYEVMAGD-GCDADVVTYSTLIDGLCKAG---RVDEAHLLLARMVRMGTP 468

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP------------------------ 225
           P+T+T+N +IK +C L  +D AI+L  EM   NC P                        
Sbjct: 469 PSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVL 528

Query: 226 ----------------DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
                           D   Y +L+DGLCK  R+ EA+    EM  +G  P  +T+++L+
Sbjct: 529 LEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILL 588

Query: 270 NGLCKNGELGRAAKLV-DNMFLKG 292
            GL K+ +L     LV D M   G
Sbjct: 589 EGLKKSKDLHELRHLVLDQMVQLG 612



 Score = 46.2 bits (108), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 53/132 (40%), Gaps = 17/132 (12%)

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KEKLE 594
           P  QPDV+TY  LL   C+   I  +    + M  +   P++  C+I +  L   K  ++
Sbjct: 3   PICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSID 62

Query: 595 A-----PQDGTDFLNELAIR------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           A        G+  + +  I       L+K +R      I+  M      P   T+  ++ 
Sbjct: 63  ALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID 122

Query: 644 ELCR---PKRIQ 652
            LC+   P R Q
Sbjct: 123 GLCKNNEPDRAQ 134


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  301 bits (772), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 188/598 (31%), Positives = 305/598 (51%), Gaps = 26/598 (4%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           S E+F+ T     Y+     +  LI     +G+FK+++ +L +M+ E  V  E  FI I 
Sbjct: 94  SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           + Y KA    +  RL   M + + C+ T KS+N VL +++    +  A   +  +++ K 
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK- 212

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             I P   TF +V+K  C +  +D+A+ L R+M    C P+   Y TL+  L K NR++E
Sbjct: 213 --IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ LL+EM + GC P   TFN +I GLCK   +  AAK+V+ M ++G  P+++TY  L++
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  G +D A  L  R+      P  V + T+I+G V  GR  D   VL  M      V
Sbjct: 331 GLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386

Query: 366 NEY-IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y++LI G +KEG    A+++   M  KGCKPN   Y+ L+DG C++GK DEA  +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L EM  +G   N   ++ L+  F +  +  +AVEI+++M +  C  +   ++ LI GLCE
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             +++ A  +   M+S G   + V Y+++I+     G ++EA KL NEM+     S  D 
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF--QGSPLDE 564

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            TYN L+  LC+   +  +  L   M+  G  P  ++CNI +  L       ++  +F  
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS-GMVEEAVEFQK 623

Query: 605 ELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           E+ +R               L +  R   G  +   +  + + P T T+  ++  LC+
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 221/443 (49%), Gaps = 44/443 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++ ++     K   V+ A  LF+ +      K  +  FN++++  +  G    A    + 
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIP-----KPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V +    I+P+  T+N +I    + GLV  A+++  +M  + C+P++Y+Y  L+DG CK
Sbjct: 379 MVTS--YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             ++DEA  +L+EM  DG  P  V FN LI+  CK   +  A ++   M  KGC P+  T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +N+LI GLC    +  A+ LL  M++   + N VTY T+IN  ++ G   +  +++  M 
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +   ++E  Y++LI GL + G+ + A  L+++M+  G  P+ +  + LI+GLCR G  +
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA E   EM+  G   +  T++SL                                   I
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSL-----------------------------------I 641

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +GLC  G++ +   ++ ++ + G  PD V +++++  LC  G V +A  L +E   +E  
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE--GIEDG 699

Query: 540 SQPDVFTYNILLNALCKQSNISH 562
             P+  T++ILL ++  Q  +  
Sbjct: 700 FVPNHRTWSILLQSIIPQETLDR 722



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 210/411 (51%), Gaps = 9/411 (2%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D T+  L+      G   + + + YR+ + + +V+  + I  F  +G+   +++A  +  
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPE-IVIFNTLIHGFVTHGR---LDDAKAVLS 377

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV  +     V ++NS++    +EGL   ALE  + + N       PN  ++ +++   
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK---GCKPNVYSYTILVDGF 434

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+LG +D A  +  EM     +P+   +  L+   CKE+R+ EAV +  EM   GC P  
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TFN LI+GLC+  E+  A  L+ +M  +G + N VTYNTLI+    +G + +A  L++ 
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY-STLISGLFKEG 381
           MV      +E+TY ++I GL + G  VD AR L     R  H    I  + LI+GL + G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGE-VDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             E+A++  K+M+ +G  P+ V +++LI+GLCR G+ ++   +  ++   G   +  T++
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           +LM    + G  + A  +  +  ++  V N   +S+L+  +     L   R
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 131/252 (51%), Gaps = 5/252 (1%)

Query: 64  PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF 123
           P + EIF   P+ G  +    TF SLI       + K    +L  M  E  V    ++  
Sbjct: 476 PEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A+ +   ++EA +L + MV +      + ++NS++  + + G   +A   +  ++  
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRD 593

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
            H    P+ ++ N++I  +CR G+V+ A++  +EM +R   PDI T+ +L++GLC+  R+
Sbjct: 594 GHA---PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           ++ + +  ++Q +G  P  VTFN L++ LCK G +  A  L+D     G +PN  T++ L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710

Query: 304 IHGLCLKGNLDK 315
           +  +  +  LD+
Sbjct: 711 LQSIIPQETLDR 722


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  300 bits (768), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 182/605 (30%), Positives = 306/605 (50%), Gaps = 31/605 (5%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFK 126
           E+FNS      ++   ST+  ++Q   + G+F+ +E +L  MR      +LE ++I   K
Sbjct: 25  EMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMK 84

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
            YG+   V+EA+  F  M D ++C  +V S N+++N++++ G +++A + Y   +  +  
Sbjct: 85  NYGRKGKVQEAVDTFERM-DFYNCDPSVHSHNAIMNILVEFGYHNQAHKVY---MRMRDR 140

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            +  +  T+ + IK+ C+      A++L R MP   C+ +   YCT++ GL      D A
Sbjct: 141 GVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHA 200

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L DEM      P  V FN L++ LCK G +  + +L+  +  +G  PN  T+N  + G
Sbjct: 201 RELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQG 260

Query: 307 LCLKGNLDKAV---------SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           LC +G LD+AV           L +MV     P+++TY +II+G  K G   D  RVL  
Sbjct: 261 LCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKD 320

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
              + F  +E+ Y +LI+G  K+G  + AM ++K  + KG +P+ V+Y+ LI GL + G 
Sbjct: 321 AVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGL 380

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
              A +++ EM  NGC  N +TY+ ++ G  + G    A  +  D     C  +   Y+ 
Sbjct: 381 ILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNT 440

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI G C+  KL  A  +  +M S+G  PDV+ Y+++++GLC AG  EE +++F  M   E
Sbjct: 441 LIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM--EE 498

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--------- 588
               P++ TYNI++++LCK   ++ ++DLL  M  +G  PD+V+     T          
Sbjct: 499 KGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDG 558

Query: 589 ---LKEKLEAPQD--GTDFLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTSTWERVV 642
              L  ++E   D   T     + +  F  Q   +   K+  VM      P   T+  V+
Sbjct: 559 AYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVI 618

Query: 643 QELCR 647
              C+
Sbjct: 619 DGFCK 623



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 160/562 (28%), Positives = 280/562 (49%), Gaps = 45/562 (8%)

Query: 109 MRREKRVVLEKSFIFIF--KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ 166
           MR   R V    + +    K++ K      A+RL   M  E  C     ++ +V+  +  
Sbjct: 135 MRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNM-PELGCDSNAVAYCTVVAGLYD 193

Query: 167 EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
            G +  A E ++ ++      + P+ + FN ++  +C+ GLV  + +L  ++  R   P+
Sbjct: 194 SGEHDHARELFDEMLAR---CLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPN 250

Query: 227 IYTYCTLMDGLCKENRLDEAVL---------LLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           ++T+   + GLC+E  LD AV           L +M   G  P  +T+N +I+G CK G 
Sbjct: 251 LFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGM 310

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +  A +++ +   KG  P+E TY +LI+G C  G+ D+A+++    +     P+ V Y T
Sbjct: 311 VQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNT 370

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I GL + G  +   +++  M E     N + Y+ +I+GL K G   DA  L    + KG
Sbjct: 371 LIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG 430

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           C P+   Y+ LIDG C+  K D A E++  M + G   +  TY++L+ G  ++GK  + +
Sbjct: 431 CPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM 490

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           EI+K M +  C  N + Y++++  LC+  K+ EA  +  +M S+G KPDVV++ ++  G 
Sbjct: 491 EIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGF 550

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDV----FTYNILLNALCKQSNISHSIDLLNSMMDR 573
           C  G ++ A +LF  M     + Q DV     TYNI+++A  +Q N++ ++ L + M + 
Sbjct: 551 CKIGDIDGAYQLFRRM-----EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNS 605

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           GCDPD  T  + +           DG            K    + G+K +   ++K   P
Sbjct: 606 GCDPDNYTYRVVI-----------DG----------FCKMGNITQGYKFLLENMEKRFIP 644

Query: 634 QTSTWERVVQELCRPKRIQAAI 655
             +T+ RV+  LC   ++  A+
Sbjct: 645 SLTTFGRVLNCLCVKDKVHEAV 666



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 250/478 (52%), Gaps = 18/478 (3%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL---------EFYNHI 180
           K  LV E+ RL   ++    C     +FN  +  + +EG   RA+         E+   +
Sbjct: 228 KKGLVFESERLLGKVLKRGVCPNLF-TFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKM 286

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           VN       P+ LT+N +I   C+ G+V +A ++ ++   +  +PD +TYC+L++G CK+
Sbjct: 287 VNG---GFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKD 343

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
              D A+ +  +    G  P+ V +N LI GL + G +  A +L++ M   GCLPN  TY
Sbjct: 344 GDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTY 403

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N +I+GLC  G +  A  L+D  +A  C P+  TY T+I+G  K  +      ++  M  
Sbjct: 404 NLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWS 463

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    +   Y+TL++GL K GK+E+ M+++K M EKGC PN + Y+ ++D LC+  K +E
Sbjct: 464 QGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNE 523

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN-NCVYNEVCYSVLI 479
           A ++L EM + G   +  ++ +L  GF + G    A ++++ M K  +  +    Y++++
Sbjct: 524 AVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIV 583

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
               E   +  A  +++ M + GC PD   Y  +I G C  G++ +  K   E +  E +
Sbjct: 584 SAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENM--EKR 641

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
             P + T+  +LN LC +  +  ++ +++ M+ +G  P+  T N    A K+ + AP+
Sbjct: 642 FIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE--TVNTIFEADKKVVAAPK 697



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 196/395 (49%), Gaps = 7/395 (1%)

Query: 77  GSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEE 136
           G ++  D T+ S+I  Y   G  +    VL     +     E ++  +   + K    + 
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDR 348

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+ +F   + +   + ++  +N+++  + Q+GL   AL+  N +        LPN  T+N
Sbjct: 349 AMAVFKDGLGK-GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAEN---GCLPNIWTYN 404

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           LVI  +C++G V +A  L  +   + C PDI+TY TL+DG CK+ +LD A  +++ M   
Sbjct: 405 LVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQ 464

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P  +T+N L+NGLCK G+     ++   M  KGC PN +TYN ++  LC    +++A
Sbjct: 465 GMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEA 524

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV--NEYIYSTLI 374
           V LL  M +    P+ V++GT+  G  K+G  +DGA  L    E+++ V      Y+ ++
Sbjct: 525 VDLLGEMKSKGLKPDVVSFGTLFTGFCKIGD-IDGAYQLFRRMEKQYDVCHTTATYNIIV 583

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           S   ++     AMKL+  M   GC P+   Y  +IDG C++G   +  + L E +     
Sbjct: 584 SAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFI 643

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            +  T+  ++       K H+AV I   M +   V
Sbjct: 644 PSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIV 678



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 53/250 (21%), Positives = 98/250 (39%), Gaps = 40/250 (16%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y       S   ++ RM  +       ++  +     KA   EE + +F  M
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM 496

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +E  C   + ++N +++ + +    + A++    +   K   + P+ ++F  +    C+
Sbjct: 497 -EEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEM---KSKGLKPDVVSFGTLFTGFCK 552

Query: 205 LGLVDNAIQLFREMPVR------------------------------------NCEPDIY 228
           +G +D A QLFR M  +                                     C+PD Y
Sbjct: 553 IGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNY 612

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY  ++DG CK   + +    L E       P+  TF  ++N LC   ++  A  ++  M
Sbjct: 613 TYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLM 672

Query: 289 FLKGCLPNEV 298
             KG +P  V
Sbjct: 673 LQKGIVPETV 682


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  299 bits (765), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 156/445 (35%), Positives = 258/445 (57%), Gaps = 6/445 (1%)

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
            C     +F  VL    ++G      + +  +++     I P+ + +N++I    + G V
Sbjct: 3   ECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDN---GISPDGIEYNILIDGYAKKGRV 59

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D A +L+ EM     EP IYTY +L++  CKE ++ EA+ L   M   G  P  VT++ +
Sbjct: 60  DEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTI 119

Query: 269 INGLCKNGELGRAAK-LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           I+GLCK G++  A + L   M  +GC  N V YN LI+GLC   N+++A  LL+ M +  
Sbjct: 120 ISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG 179

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
            +P+ +TY TI++GL ++G+  +  +   SM  R +  +   Y+ L+  L+KEGK ++AM
Sbjct: 180 YVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM 239

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           KL+K ++ KG  P+TV Y++++ GL R    DEAEE+  +M+ +GCA N  TYS ++ G 
Sbjct: 240 KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGH 299

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
             + K   A ++ ++M+K   V + V Y++L+ GLC+   + +A  +++ M+  GC PD+
Sbjct: 300 CRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 359

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V+YS +++GLC    V +A  LF+ M+  E K  PDV T+NIL++ LCK   +  + DLL
Sbjct: 360 VSYSVVLNGLCKTNKVHDARVLFDRMI--ERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 417

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEK 592
           + M   GC PD V  N  +  L+++
Sbjct: 418 DQMTCSGCAPDYVAYNTLMNGLRKQ 442



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 226/414 (54%), Gaps = 5/414 (1%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +   Y K   V+EA RL+  MV     + ++ ++NS+LN   +E     A+E +  +
Sbjct: 46  YNILIDGYAKKGRVDEANRLYEEMV-SVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTM 104

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ-LFREMPVRNCEPDIYTYCTLMDGLCK 239
                    P+ +T++ +I  +C+ G V  A++ LF +M  R C  +   Y  L++GLCK
Sbjct: 105 AEK---GFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCK 161

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +  ++ A  LL+EM   G  P  +T+N +++GLC+ G++  A +  D+M  +G  P+ V 
Sbjct: 162 DENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVA 221

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN L+  L  +G  D+A+ L   ++A   MP+ VTY +I+ GL +     +   +   M 
Sbjct: 222 YNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 281

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 N   YS ++SG  +  K +DA K+ ++M + G  P+ V Y+ L+DGLC+    D
Sbjct: 282 ASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVD 341

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A E+   M++NGCA +  +YS ++ G  ++ K H A  ++  M +   V + V +++L+
Sbjct: 342 KAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILM 401

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            GLC+ GKL EA+ +  QM   GC PD VAY+++++GL   G   +A +L   M
Sbjct: 402 DGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAM 455



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 235/436 (53%), Gaps = 24/436 (5%)

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
           +R C P+ YT+  ++   CK+ +L +   L ++M  +G  P  + +N+LI+G  K G + 
Sbjct: 1   MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A +L + M   G  P+  TYN+L++  C +  + +A+ L   M      P+ VTY TII
Sbjct: 61  EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120

Query: 340 NGLVKLGRAVDGARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           +GL K G+  +   +L   M ER    N   Y+ LI+GL K+   E A KL ++M  KG 
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ + Y+ ++ GLCR+GK  EA++    M + G + +   Y+ L+   ++ GK  +A++
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMK 240

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++KD+     + + V Y+ ++ GL     + EA  ++ +M++ GC P+   YS ++ G C
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHC 300

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
            A  V++A K+  EM  +   + PDV TYNILL+ LCK + +  + +L ++M+D GC PD
Sbjct: 301 RAKKVDDAHKVLEEMSKI--GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPD 358

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
           +V+ ++ L  L +        T+ +++  + LF R            M+++ L P   T+
Sbjct: 359 IVSYSVVLNGLCK--------TNKVHDARV-LFDR------------MIERKLVPDVVTF 397

Query: 639 ERVVQELCRPKRIQAA 654
             ++  LC+  ++  A
Sbjct: 398 NILMDGLCKAGKLDEA 413



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 190/392 (48%), Gaps = 44/392 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIR-LFH 142
           T+ SL+  +      K   M L++   EK    +  ++  I     K   V EA+  LFH
Sbjct: 80  TYNSLLNAFCKETKMKE-AMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFH 138

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+ E  C     ++N+++N + ++    RA +    + +  +   +P+ +T+N ++  +
Sbjct: 139 KMI-ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY---VPDNITYNTILSGL 194

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL------------- 249
           CR+G V  A Q F  MP R   PD+  Y  L+D L KE + DEA+ L             
Sbjct: 195 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDT 254

Query: 250 ---------------LDE-------MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
                          +DE       M   GC P   T++++++G C+  ++  A K+++ 
Sbjct: 255 VTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEE 314

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   G +P+ VTYN L+ GLC    +DKA  L   MV + C P+ V+Y  ++NGL K  +
Sbjct: 315 MSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNK 374

Query: 348 AVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
             D ARVL   M ERK   +   ++ L+ GL K GK ++A  L  QM   GC P+ V Y+
Sbjct: 375 VHD-ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYN 433

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
            L++GL + G+  +A+ +   M   G  ++ F
Sbjct: 434 TLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 21/115 (18%)

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P+ +T+ ++L + CKQ  +     L   M+D G  PD +  NI +           DG 
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILI-----------DG- 52

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                      K+ R     ++ E M+   L P   T+  ++   C+  +++ A+
Sbjct: 53  ---------YAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAM 98


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  298 bits (762), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 179/602 (29%), Positives = 298/602 (49%), Gaps = 59/602 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +IQ    SGD      +L  MR    V     + F+  A  KA    +A+  F +M
Sbjct: 61  TYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM 120

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------------YNHIVNA------ 183
                C++ V ++  +++ + +      A  +               YN ++N       
Sbjct: 121 ----ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHK 176

Query: 184 -----------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
                      K   + PN +T++ VI   CR   VD A +LFR+M    C P++ TY T
Sbjct: 177 VHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNT 236

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+ GLC+   +DEA  LLDEM+  G  P   +++ L+ GLCK G++  A K+ ++     
Sbjct: 237 LLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGD 296

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C P+ V Y+TLI GLC  G LD+A  L ++M  + C P+ VT+  +++GL K  R  +  
Sbjct: 297 CPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQ 356

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           +VL +ME+R    N   YS+LI GL K G+  DA +++K+M+ +G +PN V Y++LI G 
Sbjct: 357 QVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C     D A  ++ EM   GC  +  TY++L+ G  ++G+  +A  ++ DM    C  + 
Sbjct: 417 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 476

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           + YS LI G C+  ++  AR ++  ML +   PDVV +S+++ G CNAG V++A +L  E
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M+  +    PDV+TY  L++  CK   +  +  +L  M  RGC P++VT    + A    
Sbjct: 537 MVASD--CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDA---- 590

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                              +  + +  ++++E M+   + P   T+  ++   C    ++
Sbjct: 591 -----------------FCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLE 633

Query: 653 AA 654
            A
Sbjct: 634 EA 635



 Score =  297 bits (760), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 169/567 (29%), Positives = 296/567 (52%), Gaps = 54/567 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   + +   V+ A +LF  MV E  C   + ++N++L+ + + GL   A E  + 
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMV-ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 256

Query: 180 IV--------------------------------NAKHMNILPNTLTFNLVIKTVCRLGL 207
           +                                 +  + +  P+ + ++ +I  +C+ G 
Sbjct: 257 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGR 316

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D A +LF +M   +CEPD+ T+  LMDGLCK +RL EA  +L+ M+   C P  +T++ 
Sbjct: 317 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 376

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI+GLCK G++  A ++   M ++G  PN VTYN+LIHG C+   +D A+ L++ M A+ 
Sbjct: 377 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 436

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C+P+ +TY T+I+GL K GRA +  R+   M+ +  + +   YS LI G  K  + + A 
Sbjct: 437 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 496

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+  M+++   P+ V +S L++G C  G  D+AE +L EM+ + C+ + +TY+SL+ GF
Sbjct: 497 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 556

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + G+  +A  + K MAK  C  N V Y+ LI   C  GK   A  +  +M+  G +P+V
Sbjct: 557 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNV 616

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           + Y S+I G C  G +EEA K+  E L  +   + D+F Y ++++ LC+   +S +++LL
Sbjct: 617 ITYRSLIGGFCGTGDLEEARKIL-ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELL 675

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVML 627
            ++   G  P     +I++  ++   +  + G       A+ + +           E+ L
Sbjct: 676 EAIKQSGTPPRH---DIYVALIRGLCQGKELGK------AMEVLE-----------EMTL 715

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAA 654
            +   P    +E V+QEL R  R + A
Sbjct: 716 SRKSRPNAEAYEAVIQELAREGRHEEA 742



 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 155/496 (31%), Positives = 252/496 (50%), Gaps = 21/496 (4%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL F++    +K      N  T+N + + + R   +D    + +        P+++TY  
Sbjct: 7   ALRFFHWA--SKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAV 64

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           ++ GLCK   LD+A  LL+EM+  G  P    +N +I+ LCK       AK +D      
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCK---ARNTAKALDYFRSME 121

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C  N +T+  +I GLC    L +A +   +M     +PNE TY  +ING  K+ +     
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  M+E     N   YST+I G  ++ K + A KL++QM+E GC PN V Y+ L+ GL
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           CR G  DEA E+L EM   G   + F+Y +LM G  ++GK   A+++++D +  +C  + 
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V YS LI GLC+ G+L EA  ++ +M    C+PDVV +++++ GLC    ++EA ++   
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA---- 588
           M   +    P+V TY+ L++ LCK   +  + ++   M+ RG +P++VT N  +      
Sbjct: 362 M--EDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419

Query: 589 --------LKEKLEAPQDGTDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
                   L E++ A     D +  N L   L K  R     ++   M  KF +P   T+
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITY 479

Query: 639 ERVVQELCRPKRIQAA 654
             ++   C+ +RI  A
Sbjct: 480 SCLIGGFCKLERIDMA 495



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 146/442 (33%), Positives = 229/442 (51%), Gaps = 41/442 (9%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  ++EA +LF  M  E  C+  V +F ++++ + +     R  E    +   +  N  
Sbjct: 313 KAGRLDEACKLFEKM-RENSCEPDVVTFTALMDGLCKG---DRLQEAQQVLETMEDRNCT 368

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T++ +I  +C+ G V +A ++F+ M VR  EP++ TY +L+ G C  N +D A+LL
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           ++EM   GC P  +T+N LI+GLCK G    A +L  +M  K C P+ +TY+ LI G C 
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 488

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              +D A +L D M+    +P+ VT+ T++ G    G   D  R+L  M       + Y 
Sbjct: 489 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYT 548

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++L+ G  K G+  +A ++ K+M ++GC+PN V Y+ALID  CR GKP  A  +L EM+
Sbjct: 549 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV 608

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN-NCVYNEVCYSVLIHGLCEDGK- 487
            NG   N  TY SL+ GF  +G   +A +I + + ++ NC  +   Y V++ GLC  G+ 
Sbjct: 609 GNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRM 668

Query: 488 ----------------------------------LREARMVWTQM-LSRGCKPDVVAYSS 512
                                             L +A  V  +M LSR  +P+  AY +
Sbjct: 669 SAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEA 728

Query: 513 MIHGLCNAGSVEEALKLFNEML 534
           +I  L   G  EEA  L +E+L
Sbjct: 729 VIQELAREGRHEEANALADELL 750



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 177/349 (50%), Gaps = 6/349 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI  +  +    S  +++  M     +    ++  +     K     EA RLF  M
Sbjct: 408 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 467

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +F C   V +++ ++    +      A   ++ ++      +LP+ +TF+ +++  C 
Sbjct: 468 KAKF-CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA---VLPDVVTFSTLVEGYCN 523

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLVD+A +L  EM   +C PD+YTY +L+DG CK  R+ EA  +L  M   GC P  VT
Sbjct: 524 AGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVT 583

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+  C+ G+   A +L++ M   G  PN +TY +LI G C  G+L++A  +L+R+ 
Sbjct: 584 YTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLE 643

Query: 325 ASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             + C  +   Y  +++GL + GR      +L ++++        IY  LI GL +  + 
Sbjct: 644 RDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKEL 703

Query: 384 EDAMKLWKQM-MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
             AM++ ++M + +  +PN   Y A+I  L R G+ +EA  +  E++ N
Sbjct: 704 GKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 752



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 144/297 (48%), Gaps = 26/297 (8%)

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           +++ F  N Y Y+ L   L +  + ++   + K     G  PN   Y+ +I GLC+ G  
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A E+L EM  +G   +A  Y+ ++    ++    KA++ ++ M    C  N + ++++
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSM---ECEKNVITWTIM 132

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I GLC+  +L EA   + +M  +G  P+   Y+ +I+G C    V  A  L  EM   E 
Sbjct: 133 IDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK--ES 190

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              P+V TY+ +++  C+Q+ +  +  L   M++ GC P+LVT N  L+ L         
Sbjct: 191 GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR------- 243

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
               ++E              +++++ M ++ L P   +++ ++  LC+  +I  A+
Sbjct: 244 -NGLMDE-------------AYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMAL 286


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  298 bits (762), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 169/567 (29%), Positives = 296/567 (52%), Gaps = 54/567 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   + +   V+ A +LF  MV E  C   + ++N++L+ + + GL   A E  + 
Sbjct: 79  TYSTVIHGFCRQTKVDTAYKLFRQMV-ENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDE 137

Query: 180 IV--------------------------------NAKHMNILPNTLTFNLVIKTVCRLGL 207
           +                                 +  + +  P+ + ++ +I  +C+ G 
Sbjct: 138 MRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGR 197

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D A +LF +M   +CEPD+ T+  LMDGLCK +RL EA  +L+ M+   C P  +T++ 
Sbjct: 198 LDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSS 257

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI+GLCK G++  A ++   M ++G  PN VTYN+LIHG C+   +D A+ L++ M A+ 
Sbjct: 258 LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATG 317

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C+P+ +TY T+I+GL K GRA +  R+   M+ +  + +   YS LI G  K  + + A 
Sbjct: 318 CLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMAR 377

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+  M+++   P+ V +S L++G C  G  D+AE +L EM+ + C+ + +TY+SL+ GF
Sbjct: 378 TLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGF 437

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + G+  +A  + K MAK  C  N V Y+ LI   C  GK   A  +  +M+  G +P+V
Sbjct: 438 CKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNV 497

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           + Y S+I G C  G +EEA K+  E L  +   + D+F Y ++++ LC+   +S +++LL
Sbjct: 498 ITYRSLIGGFCGTGDLEEARKML-ERLERDENCKADMFAYRVMMDGLCRTGRMSAALELL 556

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVML 627
            ++   G  P     +I++  ++   +  + G       A+ + +           E+ L
Sbjct: 557 EAIKQSGTPPRH---DIYVALIRGLCQGKELGK------AMEVLE-----------EMTL 596

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAA 654
            +   P    +E V+QEL R  R + A
Sbjct: 597 SRKSRPNAEAYEAVIQELAREGRHEEA 623



 Score =  295 bits (754), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 176/549 (32%), Positives = 286/549 (52%), Gaps = 36/549 (6%)

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK---SFNSVLNVII 165
           M  EK V+   ++  +     KA+ + EA   F  M      K TV    ++N ++N   
Sbjct: 1   MECEKNVI---TWTIMIDGLCKANRLPEATTYFAKMKK----KGTVPNEWTYNVLINGFC 53

Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP 225
           +    HRA   Y  +   K   + PN +T++ VI   CR   VD A +LFR+M    C P
Sbjct: 54  KVHKVHRA---YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMP 110

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           ++ TY TL+ GLC+   +DEA  LLDEM+  G  P   +++ L+ GLCK G++  A K+ 
Sbjct: 111 NLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVF 170

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
           ++     C P+ V Y+TLI GLC  G LD+A  L ++M  + C P+ VT+  +++GL K 
Sbjct: 171 EDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKG 230

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
            R  +  +VL +ME+R    N   YS+LI GL K G+  DA +++K+M+ +G +PN V Y
Sbjct: 231 DRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTY 290

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           ++LI G C     D A  ++ EM   GC  +  TY++L+ G  ++G+  +A  ++ DM  
Sbjct: 291 NSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKA 350

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
             C  + + YS LI G C+  ++  AR ++  ML +   PDVV +S+++ G CNAG V++
Sbjct: 351 KFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDD 410

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A +L  EM+  +    PDV+TY  L++  CK   +  +  +L  M  RGC P++VT    
Sbjct: 411 AERLLEEMVASD--CSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTAL 468

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
           + A                       +  + +  +K++E M+   + P   T+  ++   
Sbjct: 469 IDA---------------------FCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGF 507

Query: 646 CRPKRIQAA 654
           C    ++ A
Sbjct: 508 CGTGDLEEA 516



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 151/454 (33%), Positives = 235/454 (51%), Gaps = 12/454 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + +LI     +G       +  +MR    E  VV   +F  +     K   ++EA ++  
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVV---TFTALMDGLCKGDRLQEAQQVLE 241

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           TM D  +C   V +++S+++ + + G    A E +  ++      I PN +T+N +I   
Sbjct: 242 TMEDR-NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMI---VRGIEPNVVTYNSLIHGF 297

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C    VD+A+ L  EM    C PDI TY TL+DGLCK  R  EA  L  +M+   C P  
Sbjct: 298 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 357

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +T++ LI G CK   +  A  L D+M  +  LP+ VT++TL+ G C  G +D A  LL+ 
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MVAS C P+  TY ++++G  K+GR V+  RVL  M +R    N   Y+ LI    + GK
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-INNGCAANAFTYS 441
              A KL ++M+  G +PN + Y +LI G C  G  +EA ++L  +  +  C A+ F Y 
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYR 537

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM-LS 500
            +M G   +G+   A+E+ + + ++        Y  LI GLC+  +L +A  V  +M LS
Sbjct: 538 VMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLS 597

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           R  +P+  AY ++I  L   G  EEA  L +E+L
Sbjct: 598 RKSRPNAEAYEAVIQELAREGRHEEANALADELL 631



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 177/349 (50%), Gaps = 6/349 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI  +  +    S  +++  M     +    ++  +     K     EA RLF  M
Sbjct: 289 TYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM 348

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +F C   V +++ ++    +      A   ++ ++      +LP+ +TF+ +++  C 
Sbjct: 349 KAKF-CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA---VLPDVVTFSTLVEGYCN 404

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLVD+A +L  EM   +C PD+YTY +L+DG CK  R+ EA  +L  M   GC P  VT
Sbjct: 405 AGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVT 464

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+  C+ G+   A KL++ M   G  PN +TY +LI G C  G+L++A  +L+R+ 
Sbjct: 465 YTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLE 524

Query: 325 ASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             + C  +   Y  +++GL + GR      +L ++++        IY  LI GL +  + 
Sbjct: 525 RDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKEL 584

Query: 384 EDAMKLWKQM-MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
             AM++ ++M + +  +PN   Y A+I  L R G+ +EA  +  E++ N
Sbjct: 585 GKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 633



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 23/188 (12%)

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  N + ++++I GLC+  +L EA   + +M  +G  P+   Y+ +I+G C    V  A 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            L  EM   E    P+V TY+ +++  C+Q+ +  +  L   M++ GC P+LVT N  L+
Sbjct: 63  LLLKEMK--ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            L             ++E              +++++ M ++ L P   +++ ++  LC+
Sbjct: 121 GLCR--------NGLMDE-------------AYELLDEMRERGLQPDKFSYDTLMAGLCK 159

Query: 648 PKRIQAAI 655
             +I  A+
Sbjct: 160 TGKIDMAL 167


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  296 bits (758), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 185/588 (31%), Positives = 298/588 (50%), Gaps = 57/588 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +   + KA+ VE A+ L   MV    C   V S+ +V+N + +      A    + 
Sbjct: 81  SYNTVLHGFCKANRVENALWLLEQMVMR-GCPPDVVSYTTVINGLCKLDQVDEACRVMDK 139

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++        PN +T+  ++   CR+G +D A++L R+M  R   P+  TY  +M GLC 
Sbjct: 140 MI---QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCS 196

Query: 240 ENRLDEAVLLLDEMQVDG-CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
             +LD A+ L  EM+  G C P   T++ +++ L K+G++  A +LV+ M  KGC PN V
Sbjct: 197 GRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVV 256

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY++L+HGLC  G LD+A +LL RM  S C PN VTY TII+G  KLGR  +   +L  M
Sbjct: 257 TYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 316

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +     N   Y+ L+    K GKAEDA+ L + M+EKG  PN   Y++L+D  C+  + 
Sbjct: 317 VDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEV 376

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV--------- 469
           + A ++L  MI  GC  N  +Y++++ G  ++ K H+ V + + M  NNCV         
Sbjct: 377 ERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTI 436

Query: 470 --------------------------YNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-G 502
                                      N V Y+ L+HGLC+  +  +A  +  +M  + G
Sbjct: 437 IDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG 496

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C PD++ Y+++I GLC +  V+ A KLF +M  L     PD  TY+I++++LCK   +  
Sbjct: 497 CSPDIITYNTVIDGLCKSKRVDRAYKLFLQM--LSDGLAPDDVTYSIVISSLCKWRFMDE 554

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTA------LKEKLEAPQ---DGTDFLNELAIRLF-- 611
           + ++L  M+  G DP  +T    +        L + LE  Q       + + +   +F  
Sbjct: 555 ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFID 614

Query: 612 ---KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              KR R     +++E ML+  L P T T+  +++  C   R + A++
Sbjct: 615 WLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVD 662



 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 162/518 (31%), Positives = 269/518 (51%), Gaps = 53/518 (10%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+++T+N +I  + +   +D+AI+L  EM      P++++Y T++ G CK NR++ A+ L
Sbjct: 42  PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 101

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L++M + GC P  V++  +INGLCK  ++  A +++D M  +GC PN +TY TL+ G C 
Sbjct: 102 LEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 161

Query: 310 KGNLDKAVSLLDRMV------------------------------------ASKCMPNEV 333
            G+LD AV L+ +M                                     +  C P+  
Sbjct: 162 VGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVF 221

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY TI++ LVK G+  D  R++ +M  +    N   YS+L+ GL K GK ++A  L ++M
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRM 281

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
              GC PN V Y+ +IDG C++G+ DEA  +L EM++ GC  N  TY+ L+  F + GK 
Sbjct: 282 TRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKA 341

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A+ + + M +   V N   Y+ L+   C+  ++  A  + + M+ +GC P+VV+Y+++
Sbjct: 342 EDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTV 401

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I GLC A  V E + L  +M  L     PD+ T+N +++A+CK   +  + +L N + + 
Sbjct: 402 IAGLCKATKVHEGVLLLEQM--LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES 459

Query: 574 GCDPDLVTCNIFLTA-------------LKEKLEAPQDGTDFL--NELAIRLFKRQRTSG 618
           GC P+LVT N  +               L+E         D +  N +   L K +R   
Sbjct: 460 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDR 519

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +K+   ML   L+P   T+  V+  LC+ + +  A N
Sbjct: 520 AYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANN 557



 Score =  287 bits (735), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 149/473 (31%), Positives = 264/473 (55%), Gaps = 20/473 (4%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +++ +C  G   +A+  FREM  + C PD  TY T+++GL K +RLD+A+ LL+EM  +G
Sbjct: 16  ILRGLCDAGQCSDAVLHFREMS-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P   ++N +++G CK   +  A  L++ M ++GC P+ V+Y T+I+GLC    +D+A 
Sbjct: 75  FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            ++D+M+   C PN +TYGT+++G  ++G       ++  M ER +  N   Y+ ++ GL
Sbjct: 135 RVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGL 194

Query: 378 FKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
               K + A++L+K+M E G C P+   YS ++D L + GK D+A  ++  M++ GC+ N
Sbjct: 195 CSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPN 254

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TYSSL+ G  ++GK  +A  + + M ++ C  N V Y+ +I G C+ G++ EA  +  
Sbjct: 255 VVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLE 314

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M+  GC+P+VV Y+ ++   C  G  E+A+ L   M  +E    P++FTYN LL+  CK
Sbjct: 315 EMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVM--VEKGYVPNLFTYNSLLDMFCK 372

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL------------- 603
           +  +  +  LL+SM+ +GC P++V+ N  +  L +  +   +G   L             
Sbjct: 373 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKV-HEGVLLLEQMLSNNCVPDIV 431

Query: 604 --NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             N +   + K  R    +++  ++ +   +P   T+  +V  LC+ +R   A
Sbjct: 432 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 484



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/572 (28%), Positives = 273/572 (47%), Gaps = 46/572 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  +   GD      ++ +M          ++  I         ++ A++LF  M
Sbjct: 151 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEM 210

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +   C   V +++++++ +++ G    A      +V+       PN +T++ ++  +C+
Sbjct: 211 EESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSK---GCSPNVVTYSSLLHGLCK 267

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +D A  L + M    C P+I TY T++DG CK  R+DEA  LL+EM   GC P  VT
Sbjct: 268 AGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVT 327

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + VL++  CK G+   A  LV+ M  KG +PN  TYN+L+   C K  +++A  LL  M+
Sbjct: 328 YTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMI 387

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C+PN V+Y T+I GL K  +  +G  +L  M       +   ++T+I  + K  + +
Sbjct: 388 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD 447

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI-NNGCAANAFTYSSL 443
            A +L+  + E GC PN V Y++L+ GLC+  + D+AE +L EM    GC+ +  TY+++
Sbjct: 448 IAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 507

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  +S +  +A +++  M  +    ++V YS++I  LC+   + EA  V   ML  G 
Sbjct: 508 IDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGF 567

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC---------------------------- 535
            P  + Y ++I G C  G++++AL++   +L                             
Sbjct: 568 DPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGE 627

Query: 536 -----LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
                L     PD  TYN LL   C  S    ++DL   M   GC+PD    N   T L 
Sbjct: 628 LLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPD----NATYTTLV 683

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
             L   +   D L E++     +     GFK+
Sbjct: 684 GHLVDKKSYKDLLAEVS-----KSMVDTGFKL 710



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 142/277 (51%), Gaps = 18/277 (6%)

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M  KG K +  V+ +++ GLC  G+  +A  + F  ++  C  ++ TY++++ G  +S +
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDA-VLHFREMSKTCPPDSVTYNTMINGLSKSDR 59

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A+ + ++M  N    N   Y+ ++HG C+  ++  A  +  QM+ RGC PDVV+Y++
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I+GLC    V+EA ++ ++M  ++   QP+V TY  L++  C+  ++  +++L+  M +
Sbjct: 120 VINGLCKLDQVDEACRVMDKM--IQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 177

Query: 573 RGCDPDLVTCNIFLTAL-------------KEKLEAPQDGTDFLNELAI--RLFKRQRTS 617
           RG  P+ +T N  +  L             KE  E+     D      I   L K  +  
Sbjct: 178 RGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 237

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              ++VE M+ K  SP   T+  ++  LC+  ++  A
Sbjct: 238 DACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEA 274



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 74/173 (42%), Gaps = 19/173 (10%)

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M  +G K     + S++ GLC+AG   +A+  F EM        PD  TYN ++N L K 
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM---SKTCPPDSVTYNTMINGLSKS 57

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR-------- 609
             +  +I LL  M+D G  P++ + N  L     K    ++    L ++ +R        
Sbjct: 58  DRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFC-KANRVENALWLLEQMVMRGCPPDVVS 116

Query: 610 -------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  L K  +     ++++ M+Q+   P   T+  +V   CR   +  A+
Sbjct: 117 YTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAV 169


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  294 bits (753), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 164/524 (31%), Positives = 285/524 (54%), Gaps = 10/524 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ S++Q     G F  +E +L  MR      +LE  ++   + YG+   ++EA+  F  
Sbjct: 121 TYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFER 180

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D F+C  +V S+N+++N++++ G +++A + Y  + + K   +  +  T+ + IK+ C
Sbjct: 181 M-DLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKK---VESDVYTYTIRIKSFC 236

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF-PTP 262
           R G    A++L R MPV  C  +   YCT++ G  +    D A  L DEM ++ C  P  
Sbjct: 237 RTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM-LECCLCPDV 295

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TFN L++ LCK G +  + +L D +  +G  PN  T+N  I GLC +G+LD+AV LL  
Sbjct: 296 TTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGC 355

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           +      P+ VTY T+I GL +  R V+    L  M    F  N++ Y+++I G  K+G 
Sbjct: 356 VSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGM 415

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             DA ++ K  + KG KP+   Y +L++G C+ G PD+A  +  + +  G   +   Y++
Sbjct: 416 VVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNT 475

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+KG  + G    A+++  +MA+  C  +   Y+++I+GLC+ G L +A  +    +++G
Sbjct: 476 LIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG 535

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C PD+  Y++++ G C    ++ A++L N M        PDV TYN LLN LCK +    
Sbjct: 536 CIPDIFTYNTLVDGYCRQLKLDSAIELVNRM--WSQGMTPDVITYNTLLNGLCKTAKSEE 593

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            +++  +M ++GC P+++T N  + +L    +   +  D L E+
Sbjct: 594 VMEIFKAMTEKGCAPNIITYNTIIESLCNSKKV-NEAVDLLGEM 636



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 154/525 (29%), Positives = 270/525 (51%), Gaps = 34/525 (6%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           + A  LF  M++   C   V +FN +++ + ++G    +   ++ ++      + PN  T
Sbjct: 277 DRARELFDEMLECCLCP-DVTTFNKLVHALCKKGFVLESERLFDKVLKR---GVCPNLFT 332

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           FN+ I+ +C+ G +D A++L   +      PD+ TY T++ GLC+++R+ EA   L +M 
Sbjct: 333 FNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMV 392

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P   T+N +I+G CK G +  A +++ +   KG  P+E TY +L++G C  G+ D
Sbjct: 393 NGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPD 452

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A+++    +     P+ + Y T+I GL + G  +   +++  M E+    + + Y+ +I
Sbjct: 453 QAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLII 512

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +GL K G   DA  L    + KGC P+   Y+ L+DG CR  K D A E++  M + G  
Sbjct: 513 NGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMT 572

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  TY++L+ G  ++ K  + +EI+K M +  C  N + Y+ +I  LC   K+ EA  +
Sbjct: 573 PDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDL 632

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV----FTYNIL 550
             +M S+G  PDVV++ ++I G C  G ++ A  LF  M     + Q DV     TYNI+
Sbjct: 633 LGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGM-----EKQYDVSHTTATYNII 687

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           ++A  +Q N+  ++ L + M   GCDPD  T  + +           DG           
Sbjct: 688 ISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLI-----------DG----------F 726

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            K    + G+K +   ++K   P  +T+ RV+  LC   ++Q A+
Sbjct: 727 CKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAV 771



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/539 (26%), Positives = 265/539 (49%), Gaps = 31/539 (5%)

Query: 65  FSDEIFNSTPKLGSYQLGD--------------------STFYSLIQHYANSGDFKSLEM 104
           FS+ +   T   G Y+ GD                    +TF  L+      G     E 
Sbjct: 257 FSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESER 316

Query: 105 VLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN 162
           +  ++   KR V    F F    +   K   ++ A+RL   +  E   +  V ++N+V+ 
Sbjct: 317 LFDKVL--KRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSRE-GLRPDVVTYNTVIC 373

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
            + ++     A E  + +VN       PN  T+N +I   C+ G+V +A ++ ++   + 
Sbjct: 374 GLCRKSRVVEAEECLHKMVNG---GFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKG 430

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
            +PD +TYC+L++G C++   D+A+ +  +    G  P+ + +N LI GLC+ G +  A 
Sbjct: 431 FKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPAL 490

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +L++ M  KGC P+  TYN +I+GLC  G L  A  L+   +   C+P+  TY T+++G 
Sbjct: 491 QLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGY 550

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            +  +      ++  M  +    +   Y+TL++GL K  K+E+ M+++K M EKGC PN 
Sbjct: 551 CRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNI 610

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           + Y+ +I+ LC   K +EA ++L EM + G   +  ++ +L+ GF + G    A  +++ 
Sbjct: 611 ITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRG 670

Query: 463 MAKN-NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           M K  +  +    Y+++I    E   ++ A  ++++M   GC PD   Y  +I G C  G
Sbjct: 671 MEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTG 730

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           +V +  K   E +  E    P + T+  +LN LC +  +  ++ +++ M+ +   PD V
Sbjct: 731 NVNQGYKFLLENI--EKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV 787


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 188/596 (31%), Positives = 292/596 (48%), Gaps = 31/596 (5%)

Query: 62  EQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF 121
           + P   EIF        Y      +Y  I      G FK ++ +L +M+ E  V  E  F
Sbjct: 91  DVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIF 150

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           + I K YGKA    +AIRL   M   + C+ T KS++ VL +++       A   +  ++
Sbjct: 151 MIIMKHYGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDML 210

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           +     + P   TF +V+K +C    VD+A  L R+M    C P+   Y TL+  L ++N
Sbjct: 211 SK---GVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKN 267

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           ++ EA+ LL+EM V GC P   TFN +I+GLCK  ++  A KLVD M L+G  P+ +TY 
Sbjct: 268 QVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYG 327

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL-MSMEE 360
            L+HGLC  G L++A  +L ++      PN     T+ING V  G+  +    L  +M  
Sbjct: 328 FLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMIN 383

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
             F  + + Y+ L+ GL KEG    A  L  +M  +GC+PN + Y+ L++GLC+ G  +E
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEE 443

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  +L EM   G   N+  Y+ L+       K H A+ +  +M    C  +   Y+ LI+
Sbjct: 444 AGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIY 503

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           GLC+  ++ EA  ++  ML  G   + V Y+++IH L   G+ ++AL L N+ML      
Sbjct: 504 GLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF--RGC 561

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
             D  TYN L+ A CK  NI   ++L   M+  G   D ++CNI +              
Sbjct: 562 TLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMING------------ 609

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                    L K  +    F+ +   + +   P   T+  V+  LC+  RI+ A+N
Sbjct: 610 ---------LCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 233/479 (48%), Gaps = 38/479 (7%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A  + + V EA++L   M     C   V++FN V++ + +    H A +  + ++  
Sbjct: 259 LIHALSQKNQVSEALKLLEEMF-VMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML-- 315

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN--------------------- 222
                 P+ +T+  ++  +CR+G ++ A ++  ++P  N                     
Sbjct: 316 -LRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQ 374

Query: 223 -----------CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
                       +PDI+TY  LM GLCKE  L  A  L++EM   GC P  +T+ +L+NG
Sbjct: 375 SFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNG 434

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK G L  A  ++  M  +G   N V YN LI  LC K  +  A++LL  M    C P+
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             TY ++I GL K+ R  +  R+  +M       N   Y+TLI  L + G  + A+ L  
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVN 554

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M+ +GC  + + Y+ LI   C+VG  ++  E+  +MI +G  A+  + + ++ G  + G
Sbjct: 555 DMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVG 614

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           K   A E  +D      V + V Y+ +++GLC+ G+++EA  ++ ++   G +PD   Y+
Sbjct: 615 KVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYN 674

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + I   C  G V +A   F     +E    P   T+N+L+  L KQSN  ++  +L+ +
Sbjct: 675 TFISWQCKEGMVNDACLFFYR--GIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 93/190 (48%), Gaps = 4/190 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI      G F+    ++  M      + + ++  + KA+ K   +E+ + L+  M
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +     T+ S N ++N + + G    A EF    +N      +P+ +T+N V+  +C+
Sbjct: 592 IMDGLGADTI-SCNIMINGLCKVGKVDNAFEFLRDAINR---GFVPDIVTYNSVLNGLCK 647

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G +  A+ LF  + V    PD +TY T +   CKE  +++A L       +G  P+ +T
Sbjct: 648 VGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLT 707

Query: 265 FNVLINGLCK 274
           +NVL+  L K
Sbjct: 708 WNVLVYTLLK 717


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  294 bits (752), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 187/590 (31%), Positives = 290/590 (49%), Gaps = 31/590 (5%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           EIF        Y      +Y  I      G FK ++ +L +M+ E  V  E  F+ I K 
Sbjct: 97  EIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKH 156

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           YGKA    +AIRL   M   + C+ T KS++ VL +++       A   +  +++     
Sbjct: 157 YGKAGQPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSK---G 213

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           + P   TF +V+K +C    VD+A  L R+M    C P+   Y TL+  L ++N++ EA+
Sbjct: 214 VSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEAL 273

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LL+EM V GC P   TFN +I+GLCK  ++  A KLVD M L+G  P+ +TY  L+HGL
Sbjct: 274 KLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGL 333

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL-MSMEERKFHVN 366
           C  G L++A  +L ++      PN     T+ING V  G+  +    L  +M    F  +
Sbjct: 334 CRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPD 389

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + Y+ L+ GL KEG    A  L  +M  +GC+PN + Y+ L++GLC+ G  +EA  +L 
Sbjct: 390 IFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLH 449

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM   G   N+  Y+ L+       K H A+ +  +M    C  +   Y+ LI+GLC+  
Sbjct: 450 EMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVD 509

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           ++ EA  ++  ML  G   + V Y+++IH L   G+ ++AL L N+ML        D  T
Sbjct: 510 RIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLF--RGCTLDKIT 567

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN L+ A CK  NI   ++L   M+  G   D ++CNI +                    
Sbjct: 568 YNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMING------------------ 609

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              L K  +    F+ +   + +   P   T+  V+  LC+  RI+ A+N
Sbjct: 610 ---LCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALN 656



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/479 (28%), Positives = 233/479 (48%), Gaps = 38/479 (7%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A  + + V EA++L   M     C   V++FN V++ + +    H A +  + ++  
Sbjct: 259 LIHALSQKNQVSEALKLLEEMF-VMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML-- 315

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN--------------------- 222
                 P+ +T+  ++  +CR+G ++ A ++  ++P  N                     
Sbjct: 316 -LRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQ 374

Query: 223 -----------CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
                       +PDI+TY  LM GLCKE  L  A  L++EM   GC P  +T+ +L+NG
Sbjct: 375 SFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNG 434

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK G L  A  ++  M  +G   N V YN LI  LC K  +  A++LL  M    C P+
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             TY ++I GL K+ R  +  R+  +M       N   Y+TLI  L + G  + A+ L  
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVN 554

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M+ +GC  + + Y+ LI   C+VG  ++  E+  +MI +G  A+  + + ++ G  + G
Sbjct: 555 DMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVG 614

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           K   A E  +D      V + V Y+ +++GLC+ G+++EA  ++ ++   G +PD   Y+
Sbjct: 615 KVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYN 674

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + I   C  G V +A   F     +E    P   T+N+L+  L KQSN  ++  +L+ +
Sbjct: 675 TFISWQCKEGMVNDACSFFYR--GIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 92/190 (48%), Gaps = 4/190 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI      G F+    ++  M      + + ++  + KA+ K   +E+ + L+  M
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQM 591

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +     T+ S N ++N + + G    A EF    +N      +P+ +T+N V+  +C+
Sbjct: 592 IMDGLGADTI-SCNIMINGLCKVGKVDNAFEFLRDAINR---GFVPDIVTYNSVLNGLCK 647

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G +  A+ LF  + V    PD +TY T +   CKE  +++A         +G  P+ +T
Sbjct: 648 VGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLT 707

Query: 265 FNVLINGLCK 274
           +NVL+  L K
Sbjct: 708 WNVLVYTLLK 717


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  293 bits (750), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 173/543 (31%), Positives = 283/543 (52%), Gaps = 47/543 (8%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
             ++ LI     + +FK ++ +L +++ E     E  FI I K YG+A+L  +A R+   
Sbjct: 103 DVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLD 162

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M   + C+ T KS+N VL++++       A   +  +++     ++P   TF +V+K +C
Sbjct: 163 MKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSK---GVIPTVYTFGVVMKALC 219

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
            +  VDNA  L R+M    C P+   Y TL+  L K +R++EA+ LL+EM + GC P   
Sbjct: 220 MVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVD 279

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           TFN +I GLC+   +   AKLVD M  +G  PN++TY  L++GLC  G +D+A  LL+++
Sbjct: 280 TFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV 339

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLM--SMEERKFHVNEYIYSTLISGLFKEG 381
                 PN+V +  +ING VK GR +D A   +   M +     + + ++TLI GL K+G
Sbjct: 340 PT----PNDVHFTILINGYVKSGR-LDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKG 394

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDG------------------------------ 411
               A+ +   M   GC PN + Y+ L+DG                              
Sbjct: 395 LMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYN 454

Query: 412 -----LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
                LC+ GK  +A ++L EM + GC  + FT+++L+ G  +  +   A+ +++DM  +
Sbjct: 455 VLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLD 514

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
             + N V Y+ LIH     G ++EA  +   ML RGC  D + Y+ +I   C  G+ E+A
Sbjct: 515 GVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKA 574

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L LF+EM  +     P   + N+L+N LC+   + ++++LL  M+ RG  PD+VT N  +
Sbjct: 575 LGLFDEM--VRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLI 632

Query: 587 TAL 589
             L
Sbjct: 633 NGL 635



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/480 (32%), Positives = 253/480 (52%), Gaps = 12/480 (2%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A  K   V EA++L   M     C   V +FN V+  + +    H   +  + ++  
Sbjct: 249 LIHALSKRDRVNEALKLLEEMF-LMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRML-- 305

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 PN +T+ +++  +CR+G VD A  L  ++P  N   D++ +  L++G  K  RL
Sbjct: 306 -FRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPN---DVH-FTILINGYVKSGRL 360

Query: 244 DEA-VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           DEA   L D+M  +GC P   TFN LI+GLCK G +G A  +V++M   GC PN +TY T
Sbjct: 361 DEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTT 420

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           L+ G C K  L++A  +L+ M A     N + Y  ++  L K G+      +L  M ++ 
Sbjct: 421 LLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKG 480

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              + + ++TLI GL K  + EDA+ L++ M+  G   NTV Y+ LI    R G   EA 
Sbjct: 481 CKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEAL 540

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           +++ +M+  GC  +  TY+ L+K F + G   KA+ ++ +M + + V + +  ++LI+GL
Sbjct: 541 KLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGL 600

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C  GK+  A  +   M+ RG  PDVV Y+S+I+GLC  G++ EA  LFN++       QP
Sbjct: 601 CRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKL--QAEGIQP 658

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           D  TYN L+   C+      +  LL   ++    P+ VT  I ++   +++   ++G  F
Sbjct: 659 DAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEI-GKENGISF 717



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 198/403 (49%), Gaps = 37/403 (9%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D T+  L+      G     +++L ++     V     F  +   Y K+  ++EA    +
Sbjct: 313 DITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDV----HFTILINGYVKSGRLDEANAFLY 368

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI-VNAKHMNILP----------- 190
             + +  C+  V +FN++++ + ++GL   A++  N +  N    N++            
Sbjct: 369 DKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKK 428

Query: 191 --------------------NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
                               N + +N++++ +C+ G V  A+ +  EM  + C+PDI+T+
Sbjct: 429 NQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTF 488

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            TL+ GLCK +R ++A+ L  +M +DG     VT+N LI+   + G +  A KLV++M  
Sbjct: 489 NTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLF 548

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +GC  +E+TYN LI   C  G  +KA+ L D MV    +P+ ++   +INGL ++G+  +
Sbjct: 549 RGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCN 608

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +L  M  R    +   Y++LI+GL K G   +A  L+ ++  +G +P+ + Y+ LI 
Sbjct: 609 ALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLIC 668

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF-ESGK 452
             CR G  D+A  +L   + N    N  T+  L+  F  E GK
Sbjct: 669 WHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNFIKEIGK 711



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 24/252 (9%)

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           VY  LID L    +    +++L ++   G A     +  +MK +  +    +A  +  DM
Sbjct: 104 VYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICIMKYYGRANLPGQATRMLLDM 163

Query: 464 AKNNCVYNEV-CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
               C       Y+V++  L        A  V+ +MLS+G  P V  +  ++  LC    
Sbjct: 164 KGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNE 223

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           V+ A  L  +M   +    P+   Y  L++AL K+  ++ ++ LL  M   GC PD+   
Sbjct: 224 VDNACSLLRDM--TKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDV--- 278

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                             D  N++   L +  R   G K+V+ ML +  +P   T+  ++
Sbjct: 279 ------------------DTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLM 320

Query: 643 QELCRPKRIQAA 654
             LCR  ++  A
Sbjct: 321 NGLCRVGKVDEA 332


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  290 bits (743), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 171/501 (34%), Positives = 268/501 (53%), Gaps = 26/501 (5%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++NS+LN + + G    A   +  +  AK     P+ ++++ +I ++ R G  + A++
Sbjct: 9   VVTYNSLLNALAKAGQCEEAQLLFEELKAAKWT---PDVVSYSCLINSLGRAGKWEAALE 65

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  EM  + C+P+++TY TL+D L K  + DEA+ LL EM+ +GC P   T+N LI+ L 
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G L  A  L   M  +GC+P+  TYN+LI+GL   G   KA+ LL+ M    C P+ +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY ++I GL K G  V   ++   M+ R    +   ++ L+  L K G+ +DA++L  +M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            E+G KP  V Y+ALI G  +VG   EA  +L EM  NGC  +  TYS L+ G  ++ + 
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A ++ K M K  C  + + Y+ LI+GL + G L +A  ++ +M S+GC PDVV YS++
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I  L  A  VE A  LF EM  +    QPD+FTY  ++  L K   +  +  L + M  +
Sbjct: 366 ITALGKAARVESACVLFEEMESV--GIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGK 423

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           G  PD++T N FL +L                     FK  R     KI E M +  L P
Sbjct: 424 GLSPDVITYNAFLNSLGRGGR----------------FKEAR-----KIFEDMKESGLLP 462

Query: 634 QTSTWERVVQELCRPKRIQAA 654
             +T++ ++  L + K +  A
Sbjct: 463 DVATYDALLLGLSKTKEVDDA 483



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 151/507 (29%), Positives = 262/507 (51%), Gaps = 6/507 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+     +G F     +L  MR    V   +++  +    GKA  + EA  LF  M
Sbjct: 81  TYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEM 140

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E  C     ++NS++  + + G   +A+E    +   +     P+ +T++ +I  + +
Sbjct: 141 -RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM---ERHGCPPDVMTYSSLITGLGK 196

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G    A +LF+EM  R  +PD  T+  LMD L K  R+D+A+ LLDEM+  G  P  VT
Sbjct: 197 DGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVT 256

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI G  K G+L  A  L+D M   GC P+ VTY+ LI GL     LD+A  +L +M 
Sbjct: 257 YNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKME 316

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C P+ +TY T+INGL K G   D  R+   M+ +  + +   YSTLI+ L K  + E
Sbjct: 317 KEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVE 376

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A  L+++M   G +P+   Y ++I  L + G+ D+A+ +  EM   G + +  TY++ +
Sbjct: 377 SACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFL 436

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
                 G+  +A +I++DM ++  + +   Y  L+ GL +  ++ +A  +  +++ +GC 
Sbjct: 437 NSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCA 496

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D + +   +  L + G+V+EA +L            P   +YN L++AL K   +S + 
Sbjct: 497 FDSLKFDECLEILTSWGNVDEAHELLQ--FANSKGLWPGASSYNALIDALAKAGRVSEAF 554

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKE 591
           + L  + ++G  PD+V+ +  ++AL +
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQ 581



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/490 (29%), Positives = 247/490 (50%), Gaps = 6/490 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI     +G       +   MR    V    ++  +    GK    ++A+ L   M
Sbjct: 116 TYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +   C   V +++S++  + ++G   +A + +  +   K     P+++TF  ++  + +
Sbjct: 176 -ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM---KRRGRKPDSITFTALMDALGK 231

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD+A++L  EM  R  +P + TY  L+ G  K   L EA  LLDEM+ +GC P  VT
Sbjct: 232 AGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVT 291

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LI GL K  +L  A +++  M  +GC P+ +TYNTLI+GL   G L+ A  L DRM 
Sbjct: 292 YSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMK 351

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  C P+ VTY T+I  L K  R      +   ME      + + Y ++I+ L K G+ +
Sbjct: 352 SKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVD 411

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA +L+ +M  KG  P+ + Y+A ++ L R G+  EA +I  +M  +G   +  TY +L+
Sbjct: 412 DADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALL 471

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++ +   A  + K++ +  C ++ + +   +  L   G + EA  +     S+G  
Sbjct: 472 LGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLW 531

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P   +Y+++I  L  AG V EA     ++   E   +PD+ +Y+ L++AL +   I  + 
Sbjct: 532 PGASSYNALIDALAKAGRVSEAFNTLEDL--KEQGGKPDIVSYSSLISALGQTGQIDTAF 589

Query: 565 DLLNSMMDRG 574
           +LL  M  RG
Sbjct: 590 ELLEEMSKRG 599



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 209/438 (47%), Gaps = 4/438 (0%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI      G+      +   M+R  R     +F  +  A GKA  V++A+ L   M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E   K  V ++N++   I   G     +E YN +   K     P+ +T++ +I  + +
Sbjct: 246 -KERGVKPGVVTYNAL---IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIK 301

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A Q+ ++M    C PD  TY TL++GL K   L++A  L D M+  GC P  VT
Sbjct: 302 ASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVT 361

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LI  L K   +  A  L + M   G  P+  TY ++I  L   G +D A  L   M 
Sbjct: 362 YSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMR 421

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ +TY   +N L + GR  +  ++   M+E     +   Y  L+ GL K  + +
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVD 481

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA  L K+++E+GC  +++ +   ++ L   G  DEA E+L    + G    A +Y++L+
Sbjct: 482 DACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALI 541

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
               ++G+  +A    +D+ +     + V YS LI  L + G++  A  +  +M  RG K
Sbjct: 542 DALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLK 601

Query: 505 PDVVAYSSMIHGLCNAGS 522
               +YS+++  L + G+
Sbjct: 602 LSPRSYSNLVRKLQDWGA 619


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 179/634 (28%), Positives = 323/634 (50%), Gaps = 20/634 (3%)

Query: 24  TLSLTTIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGD 83
           + SL   P   +  F S  SA  S+  ++      ++ +   +  +FN   K  ++    
Sbjct: 24  SFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEP 83

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           + +  ++     SG F  ++ +L  M+  +  +   +F+ + ++Y +  L +E + +   
Sbjct: 84  ALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDW 143

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+DEF  K     +N +LN+++ +G   + +E  +  ++     I P+  TFN++IK +C
Sbjct: 144 MIDEFGLKPDTHFYNRMLNLLV-DGNSLKLVEISHAKMSV--WGIKPDVSTFNVLIKALC 200

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R   +  AI +  +MP     PD  T+ T+M G  +E  LD A+ + ++M   GC  + V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           + NV+++G CK G +  A   +  M  + G  P++ T+NTL++GLC  G++  A+ ++D 
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+     P+  TY ++I+GL KLG   +   VL  M  R    N   Y+TLIS L KE +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            E+A +L + +  KG  P+   +++LI GLC       A E+  EM + GC  + FTY+ 
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+      GK  +A+ + K M  + C  + + Y+ LI G C+  K REA  ++ +M   G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
              + V Y+++I GLC +  VE+A +L ++M+      +PD +TYN LL   C+  +I  
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM--EGQKPDKYTYNSLLTHFCRGGDIKK 558

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQ-DGTDF----LNELAI 608
           + D++ +M   GC+PD+VT    ++ L          + L + Q  G +      N +  
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
            LF++++T+    +   ML++  +P  +   R+V
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 164/526 (31%), Positives = 258/526 (49%), Gaps = 38/526 (7%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           STF  LI+    +   +   ++L  M     V  EK+F  + + Y +   ++ A+R+   
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF----------------YNHIVNA---- 183
           MV EF C  +  S N +++   +EG    AL F                +N +VN     
Sbjct: 250 MV-EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308

Query: 184 ---KH----MNIL------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
              KH    M+++      P+  T+N VI  +C+LG V  A+++  +M  R+C P+  TY
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            TL+  LCKEN+++EA  L   +   G  P   TFN LI GLC       A +L + M  
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           KGC P+E TYN LI  LC KG LD+A+++L +M  S C  + +TY T+I+G  K  +  +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +   ME      N   Y+TLI GL K  + EDA +L  QM+ +G KP+   Y++L+ 
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
             CR G   +A +I+  M +NGC  +  TY +L+ G  ++G+   A ++ + +       
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRG-CKPDVVAYSSMIHGLCNAGS-VEEALK 528
               Y+ +I GL    K  EA  ++ +ML +    PD V+Y  +  GLCN G  + EA+ 
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVD 668

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
              E+  LE    P+  +  +L   L   S     + L+N +M + 
Sbjct: 669 FLVEL--LEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 185/381 (48%), Gaps = 24/381 (6%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P    Y  ++  L   G+ D    +L+ M +S+C     T+  +I    +     +   V
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140

Query: 355 LMSM-EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTVVYSALIDGL 412
           +  M +E     + + Y+ +++ L  +G +   +++    M   G KP+   ++ LI  L
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLN-LLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           CR  +   A  +L +M + G   +  T++++M+G+ E G    A+ I + M +  C ++ 
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
           V  +V++HG C++G++ +A     +M ++ G  PD   ++++++GLC AG V+ A+++ +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
            ML  +    PDV+TYN +++ LCK   +  ++++L+ M+ R C P+ VT N  ++ L  
Sbjct: 320 VML--QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377

Query: 590 KEKLEAPQDGTDFLNELAIR--------------LFKRQRTSGGFKIVEVMLQKFLSPQT 635
           + ++E   +    L    I               L +  R +   ++ E M  K   P  
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA--MELFEEMRSKGCEPDE 435

Query: 636 STWERVVQELCRPKRIQAAIN 656
            T+  ++  LC   ++  A+N
Sbjct: 436 FTYNMLIDSLCSKGKLDEALN 456



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 124/296 (41%), Gaps = 27/296 (9%)

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
           F     +Y  ++  L + G  +D  K+ + M    C+  T  +  LI+   +    DE  
Sbjct: 79  FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138

Query: 423 EILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV-CYSVLIH 480
            ++  MI+  G   +   Y+ ++      G   K VEI         +  +V  ++VLI 
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLN-LLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC   +LR A ++   M S G  PD   +++++ G    G ++ AL++  +M+  E   
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV--EFGC 255

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDR-GCDPDLVTCNIFLTALKEKLEAPQDG 599
                + N++++  CK+  +  +++ +  M ++ G  PD  T N  +  L          
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL---------- 305

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                       K        +I++VMLQ+   P   T+  V+  LC+   ++ A+
Sbjct: 306 -----------CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  289 bits (739), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 181/636 (28%), Positives = 316/636 (49%), Gaps = 31/636 (4%)

Query: 24  TLSLTTIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGD 83
           + SL   P   +  F S  SA  S+  ++      ++++   +  +FN   K  ++    
Sbjct: 24  SFSLKLTPPSSTISFASPNSAALSSSDVKLLDSLRSQADDSAALRLFNLASKKPNFSPEP 83

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           + +  ++     SG F  +  +L  M+     +    F+ + ++Y +  L +E + + H 
Sbjct: 84  ALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHW 143

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH--MNILPNTLTFNLVIKT 201
           M+D+F  K     +N +LN+++ +G   + +E    I +AK     I P+  TFN++IK 
Sbjct: 144 MIDDFGLKPDTHFYNRMLNLLV-DGNNLKLVE----IAHAKMSVWGIKPDVSTFNVLIKA 198

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +CR   +  AI +  +MP     PD  T+ T+M G  +E  LD A+ + ++M   GC  +
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWS 258

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
            V+ NV+++G CK G +  A   +  M  + G  P++ T+NTL++GLC  G++  A+ ++
Sbjct: 259 NVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIM 318

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D M+     P+  TY ++I+GL KLG   +    L  M  R    N   Y+TLIS L KE
Sbjct: 319 DVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKE 378

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            + E+A +L + +  KG  P+   +++LI GLC       A E+  EM + GC  + FTY
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+      GK  +A+ + K M  + C  + + Y+ LI G C+  K+REA  ++ +M  
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEV 498

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G   + V Y+++I GLC +  VE+A +L ++M+      +PD FTYN LL   C+  +I
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIM--EGQKPDKFTYNSLLTHFCRGGDI 556

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             + D++ +M   GC+PD+VT    ++                      L K  R     
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISG---------------------LCKAGRVEVAS 595

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           K++  +  K ++     +  V+Q L R ++   AIN
Sbjct: 596 KLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAIN 631



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/526 (31%), Positives = 257/526 (48%), Gaps = 38/526 (7%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           STF  LI+    +   +   ++L  M     V  EK+F  I + Y +   ++ A+R+   
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQ 249

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF----------------YNHIVNA---- 183
           MV EF C  +  S N +++   +EG    AL F                +N +VN     
Sbjct: 250 MV-EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308

Query: 184 ---KH----MNIL------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
              KH    M+++      P+  T+N VI  +C+LG V  A++   +M  R+C P+  TY
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTY 368

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            TL+  LCKEN+++EA  L   +   G  P   TFN LI GLC       A +L + M  
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           KGC P+E TYN LI  LC KG LD+A+++L +M  S C  + +TY T+I+G  K  +  +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIRE 488

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +   ME      N   Y+TLI GL K  + EDA +L  QM+ +G KP+   Y++L+ 
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLT 548

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
             CR G   +A +I+  M +NGC  +  TY +L+ G  ++G+   A ++ + +       
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIAL 608

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRG-CKPDVVAYSSMIHGLCNAGS-VEEALK 528
               Y+ +I GL    K  EA  ++ +ML +    PD V+Y  +  GLCN G  + EA+ 
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVD 668

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
              E+  LE    P+  +  +L   L   S     + L+N +M + 
Sbjct: 669 FLVEL--LEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  288 bits (737), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 173/585 (29%), Positives = 296/585 (50%), Gaps = 42/585 (7%)

Query: 77  GSYQLGDSTFYS--LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
           G      STF     +Q    +G    +  +  RM          ++  + K+  + + +
Sbjct: 117 GDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQI 176

Query: 135 EEAIRLFHTMVDEFHC---KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           ++A     TM+D+      K  V  +  +     + G    ALE + +I +       P+
Sbjct: 177 DKAF----TMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS-------PD 225

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            + +N +I   CR    D A++  +EM  R   PD++TY  L+DGLCK ++ D+A  +L 
Sbjct: 226 AIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLH 285

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM   G  P  VTFN +++GLCK G+  RA  L+  M  + C P+  TYNTLI GLC + 
Sbjct: 286 EMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQ 345

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           N+D+A  L+D  V+S  +P+ VTY  + +GL K GR  +   ++  M  +    N   Y+
Sbjct: 346 NVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYN 405

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           TLI GL K  K E A +L + ++  G  P+ V Y+ ++DGLC+ G+ D+A +++  M+  
Sbjct: 406 TLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKR 465

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           GC  +  TY++LM+G   +G+  +A  I+K+M   +C  + + Y  L++G C+  + +EA
Sbjct: 466 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA 525

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
           + V   +  RG  P +  Y++++ G C  G ++E   +F +M C      P++ TYNI++
Sbjct: 526 QKVVDGI--RG-TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR--GCVPNIKTYNIVM 580

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           + LCK   +  +   L SM   GC PD+V+ NI +           DG          LF
Sbjct: 581 DGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII-----------DG----------LF 619

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           K  +     ++++ M+Q  + P   T+  ++ + C+ +R   A+ 
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVG 664



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 169/670 (25%), Positives = 311/670 (46%), Gaps = 97/670 (14%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQH-YANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK 126
           EIF + P        D+  Y+ I H +    D       L  M   K      ++  +  
Sbjct: 216 EIFRNIPS------PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILID 269

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------- 176
              KA   ++A  + H MVD      TV +FNS+++ + + G + RA             
Sbjct: 270 GLCKASKTDKASEMLHEMVDRGVTPDTV-TFNSIMDGLCKAGKFERAHSLLAVMAERNCR 328

Query: 177 -----YNHIVNA--KHMNI---------------LPNTLTFNLVIKTVCRLGLVDNAIQL 214
                YN +++   K  N+               +P+ +T++++   +C+ G +D A +L
Sbjct: 329 PSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFEL 388

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
            +EM  + C P++ TY TL+DGLCK ++ ++A  LL+ +   G  P  VT+ ++++GLCK
Sbjct: 389 VKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCK 448

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G L +A K+V+ M  +GC P+ +TY  L+ GLC  G +D+A  +   MV+  C  + + 
Sbjct: 449 EGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALA 508

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y +++NG  K  R  +  +V+  +    +     +Y+ L+ G  KEG+ ++   +++ M 
Sbjct: 509 YVSLVNGYCKSSRTKEAQKVVDGIRGTPYI---DVYNALMDGYCKEGRLDEIPNVFEDMA 565

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            +GC PN   Y+ ++DGLC+ GK DEA   L  M + GC  +  +Y+ ++ G F++ K  
Sbjct: 566 CRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPK 625

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A ++   M +     + V Y+ L+   C++ +  +A  +   M+  G  PD V Y+++I
Sbjct: 626 EARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLI 685

Query: 515 HGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            GL     + +A +L +EML   C+         TYN +++ LCK+  +  ++ L++ M 
Sbjct: 686 SGLSQTNRLGDAYELMHEMLRNGCVVSACT----TYNTIIDRLCKEGCLKQALLLMDHMT 741

Query: 572 DRGCDPDLVTCNIFL------------TALKEKLEAPQDGTDF----------------- 602
             G + + VT NIF+            ++L  +++  +D   +                 
Sbjct: 742 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRAS 801

Query: 603 ------------------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
                              N L     K +R      ++ +M+Q+  SP   T+  V+  
Sbjct: 802 KLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITC 861

Query: 645 LCRPKRIQAA 654
           LC+  ++  A
Sbjct: 862 LCKLDKVDKA 871



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 159/557 (28%), Positives = 281/557 (50%), Gaps = 46/557 (8%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA   E+A  L  ++V        V ++  +++ + +EG   +AL+    ++        
Sbjct: 413 KASKTEKAYELLESLVSSGFVPDVV-TYTIIVDGLCKEGRLDKALKMVEGMLK---RGCT 468

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+  +++ +CR G VD A  +F+EM  ++C  D   Y +L++G CK +R  EA   
Sbjct: 469 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA--- 525

Query: 250 LDEMQVDGCFPTPV--TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
             +  VDG   TP    +N L++G CK G L     + ++M  +GC+PN  TYN ++ GL
Sbjct: 526 --QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 583

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G +D+A   L+ M ++ C+P+ V+Y  II+GL K  +  +  +VL  M +     + 
Sbjct: 584 CKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDA 643

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+TL++   KE + +DA+ + K M++ G  P+ V Y+ LI GL +  +  +A E++ E
Sbjct: 644 VTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHE 703

Query: 428 MINNGCAANA-FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           M+ NGC  +A  TY++++    + G   +A+ +   M  +    N V Y++ I  LC++G
Sbjct: 704 MLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 763

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM-----LCLEPKSQ 541
           +L EA  + ++M +     D V+Y+++I GLC A  ++ A KL  EM     LC+     
Sbjct: 764 RLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH-- 818

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
               T+N+L++A  K   +  ++ LL  M+ RGC P ++T N+ +T L  KL+      +
Sbjct: 819 ----TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLC-KLDKVDKAWE 873

Query: 602 FLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
             +E+A+R               L  + R     +++E M           WE V     
Sbjct: 874 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVAPH-- 931

Query: 647 RPKRIQAAINKCWSNLY 663
              + Q     C+S+ +
Sbjct: 932 --SQFQTTFGPCYSSFH 946



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 213/423 (50%), Gaps = 12/423 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SL+  Y  S   K  + V+  +R    + +  + +     Y K   ++E   +F  M 
Sbjct: 509 YVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALM---DGYCKEGRLDEIPNVFEDMA 565

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
               C   +K++N V++ + + G    A  F   + +A     +P+ +++N++I  + + 
Sbjct: 566 CR-GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA---GCVPDVVSYNIIIDGLFKA 621

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
                A Q+  +M      PD  TY TLM   CKE R D+AV +L  M   G  P  VT+
Sbjct: 622 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 681

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNE-VTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           N LI+GL +   LG A +L+  M   GC+ +   TYNT+I  LC +G L +A+ L+D M 
Sbjct: 682 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 741

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 N VTY   I+ L K GR  + + +L  M+  +   +E  Y+T+I GL K  + +
Sbjct: 742 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLD 798

Query: 385 DAMKLWKQMME-KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            A KL ++M+  KG    +  ++ LID   +  + DEA  +L  M+  GC+ +  TY+ +
Sbjct: 799 RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMV 858

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +    +  K  KA E++ +MA    V + V Y+VLI+GLC  G+ +EA  V  +M S  C
Sbjct: 859 ITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 918

Query: 504 KPD 506
           + D
Sbjct: 919 EID 921



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 204/392 (52%), Gaps = 13/392 (3%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +L+  Y   G    +  V   M     V   K++  +     K   V+EA     +M 
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESM- 599

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
               C   V S+N +++ + +      A +  + ++ A    I P+ +T+N ++   C+ 
Sbjct: 600 HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQA---GIPPDAVTYNTLMAQFCKE 656

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP-VT 264
              D+A+ + + M     +PD  TY TL+ GL + NRL +A  L+ EM  +GC  +   T
Sbjct: 657 ERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTT 716

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N +I+ LCK G L +A  L+D+M   G   N VTYN  I  LC +G LD+A SLL  M 
Sbjct: 717 YNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM- 775

Query: 325 ASKCMPNEVTYGTIINGLVK---LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
               + +EV+Y T+I GL K   L RA   AR ++++  +   +  + ++ LI    K  
Sbjct: 776 --DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAV--KGLCITSHTFNLLIDAFTKTK 831

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + ++A+ L   M+++GC P+ + Y+ +I  LC++ K D+A E+  EM   G  A++ +Y+
Sbjct: 832 RLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYT 891

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
            L+ G    G+G +A+++ ++MA ++C  +++
Sbjct: 892 VLIYGLCGQGRGKEALQVLEEMASSDCEIDDL 923



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/287 (24%), Positives = 130/287 (45%), Gaps = 42/287 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  +     F     +L  M +        ++  +     + + + +A  L H M
Sbjct: 645 TYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 704

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +          ++N++++ + +EG   +AL   +H+       +  NT+T+N+ I  +C+
Sbjct: 705 LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTG---HGVEANTVTYNIFIDRLCK 761

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE------------------------ 240
            G +D A  L  EM       D  +Y T++ GLCK                         
Sbjct: 762 EGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSH 818

Query: 241 ------------NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
                        RLDEA+ LL  M   GC P+ +T+N++I  LCK  ++ +A +L D M
Sbjct: 819 TFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEM 878

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            ++G + + V+Y  LI+GLC +G   +A+ +L+ M +S C  +++ +
Sbjct: 879 AVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKW 925


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  286 bits (733), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 175/588 (29%), Positives = 301/588 (51%), Gaps = 28/588 (4%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFK 126
           E+FNS  K   ++   ST+ S+I+     G F+++E VL  MR+     +LE  ++   K
Sbjct: 25  EMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYVGAMK 84

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
            YG+   V+EA+ +F  M D + C+ TV S+N+++++++  G + +A + Y   +  +  
Sbjct: 85  NYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSILVDSGYFDQAHKVY---MRMRDR 140

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I P+  +F + +K+ CR      A++L   M  + CE ++  YCT++ G  +EN  DE 
Sbjct: 141 GITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEG 200

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L  +M   G      TFN L++ LCK G++    KL+D +  +G LPN  TYN  I G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQG 260

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC KG LD AV ++ R++     P+ VTY  +I GL K  +  +    L  +       +
Sbjct: 261 LCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPD 320

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + Y+TLI+G  K G  + A ++    +  G  P+   Y +LIDGLC  G+ + A  +  
Sbjct: 321 SFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFN 380

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E +  G   N   Y++L+KG    G   +A ++  +M++   +     +++L++GLC+ G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMG 440

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            + +A  +   M+S+G  PD+  ++ +IHG      +E AL++ + M  ++    PDV+T
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM--MDNGVDPDVYT 498

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN LLN LCK S     ++   +M+++GC P+L T NI L +L                 
Sbjct: 499 YNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESL----------------- 541

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             R  K  +  G   ++E M  K ++P   T+  ++   C+   +  A
Sbjct: 542 -CRYHKLDKALG---LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/522 (28%), Positives = 259/522 (49%), Gaps = 30/522 (5%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +E   LF  M+        + +FN +L+V+ ++G      +  + ++      +LPN  T
Sbjct: 198 DEGYELFGKMLAS-GVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKR---GVLPNLFT 253

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N  I+ +C+ G +D A+++   +  +  +PD+ TY  L+ GLCK ++  EA + L ++ 
Sbjct: 254 YNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLV 313

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +G  P   T+N LI G CK G +  A +++ N    G +P+E TY +LI GLC +G  +
Sbjct: 314 NEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETN 373

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A++L +  +     PN + Y T+I GL   G  ++ A++   M E+        ++ L+
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILV 433

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +GL K G   DA  L K M+ KG  P+   ++ LI G     K + A EIL  M++NG  
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVD 493

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            + +TY+SL+ G  ++ K    +E +K M +  C  N   +++L+  LC   KL +A  +
Sbjct: 494 PDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGL 553

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCLEPKSQPDVFTYNILLN 552
             +M ++   PD V + ++I G C  G ++ A  LF +M  + +   S P   TYNI+++
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTP---TYNIIIH 610

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
           A  ++ N++ +  L   M+DR   PD  T  + +           DG            K
Sbjct: 611 AFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV-----------DG----------FCK 649

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                 G+K +  M++    P  +T  RV+  LC   R+  A
Sbjct: 650 TGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 132/519 (25%), Positives = 225/519 (43%), Gaps = 75/519 (14%)

Query: 62  EQPFSDEIFNSTPKL--GSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK 119
           E+ F DE +    K+      L  STF  L+      GD K  E +L ++   KR VL  
Sbjct: 193 EENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVI--KRGVLPN 250

Query: 120 SFIFIFKAYG--KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSV----------------L 161
            F + F   G  +   ++ A+R+   ++D+   K  V ++N +                L
Sbjct: 251 LFTYNFFIQGLCQKGELDAAVRMVGRLIDQ-GPKPDVVTYNYLIYGLCKNSKFQEAEVYL 309

Query: 162 NVIIQEGLYHRALEFYNHI----------------VNAKHMNILPNTLTFNLVIKTVCRL 205
             ++ EGL   +  +   I                VNA     +P+  T+  +I  +C  
Sbjct: 310 GKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHE 369

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G  + A+ LF E   +  +P++  Y TL+ GL  +  + EA  L  EM   G  P   TF
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTF 429

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N+L+NGLCK G +  A  LV  M  KG  P+  T+N LIHG   +  ++ A+ +LD M+ 
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMD 489

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +   P+  TY +++NGL K  +  D      +M E+    N + ++ L+  L +  K + 
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDK 549

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA------------------------ 421
           A+ L ++M  K   P+ V +  LIDG C+ G  D A                        
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIII 609

Query: 422 ------------EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
                       E++  EM++     + +TY  ++ GF ++G      +   +M +N  +
Sbjct: 610 HAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFI 669

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            +      +I+ LC + ++ EA  +  +M+ +G  P+ V
Sbjct: 670 PSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 194/447 (43%), Gaps = 52/447 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y   G  +  E +L        V  E ++  +            A+ LF+  
Sbjct: 323 TYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +   K  V  +N+++  +  +GL   A +  + +       ++P   TFN+++  +C+
Sbjct: 383 LGK-GIKPNVILYNTLIKGLSNQGLILEAAQLASEM---SEKGLIPEVQTFNILVNGLCK 438

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G V +A  L + M  +   PDI+T+  L+ G   + +++ A+ +LD M  +G  P   T
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYT 498

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L+NGLCK  +     +    M  KGC PN  T+N L+  LC    LDKA+ LL+ M 
Sbjct: 499 YNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMK 558

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVL----------------------------- 355
                P+ VT+GT+I+G  K G  +DGA  L                             
Sbjct: 559 NKSVNPDAVTFGTLIDGFCKNGD-LDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLN 617

Query: 356 MSMEERKFH--------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           ++M E+ F          + Y Y  ++ G  K G  +   K   +MME G  P+      
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGR 677

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE--IWKDMAK 465
           +I+ LC   +  EA  I+  M+  G    A      +   F+  K   A    + +D+ K
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGLVPEA------VNTIFDHDKKEVAAPKLVLEDLLK 731

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREAR 492
            +C+     Y +L  GL  D +LR+ +
Sbjct: 732 KSCI-TYYAYELLFDGL-RDKRLRKKK 756



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 119/254 (46%), Gaps = 30/254 (11%)

Query: 426 FEMINNGCAANAF-----TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
            EM N+    + F     TY S+++     GK     E+  DM +N  V N +   V + 
Sbjct: 24  LEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQN--VGNHMLEGVYVG 81

Query: 481 GL---CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
            +      GK++EA  V+ +M    C+P V +Y++++  L ++G  ++A K++  M   +
Sbjct: 82  AMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMR--D 139

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT-CNIFLTALKEKLEAP 596
               PDV+++ I + + C+ S    ++ LLN+M  +GC+ ++V  C +     +E  +  
Sbjct: 140 RGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK-- 197

Query: 597 QDGTDFL---------------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
            +G +                 N+L   L K+       K+++ ++++ + P   T+   
Sbjct: 198 DEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFF 257

Query: 642 VQELCRPKRIQAAI 655
           +Q LC+   + AA+
Sbjct: 258 IQGLCQKGELDAAV 271


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  285 bits (729), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 191/629 (30%), Positives = 312/629 (49%), Gaps = 55/629 (8%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E F+S P+ G       T+ +LI     +G    L++ L  +R +       +F  +   
Sbjct: 232 EFFDSMPQTG-VSPNTVTYDALIDGLCKAG---KLDIALGLLRDKNSQAGMFAFSSLLHG 287

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
             +AH +EEAI+L   M     C   V  FNS++N + Q      A E ++ +   K   
Sbjct: 288 LCQAHRLEEAIQLLKAM----PCVPNVVCFNSLMNGLCQARRVDEAFELFDVM---KESG 340

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNA---IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              + +T+N+++K +C+L  +  A   ++L R      C P++ T+ TL+ GLC   R++
Sbjct: 341 CSADVITYNILLKGLCKLRRIPEAYRHVELMRR--TEGCSPNVVTFSTLIQGLCNAGRVN 398

Query: 245 EAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKL------------------- 284
           +A  + + M  V+G  P   T+  L+ GLCK G+  R  +                    
Sbjct: 399 QAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHS 458

Query: 285 --VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
             VD + ++ C P  VTYNTL+ GL   G +  A+ LL+ M+ S   P+ +T+ ++++GL
Sbjct: 459 PEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGL 518

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K  R +D   V     ER    N   YSTLI GL K  K ++A++L  +M+E GC+ NT
Sbjct: 519 CKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 578

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V YS ++DGL +VG+ ++A  +L +M + GC  +A TY++L+ GFF+  +  +AV + ++
Sbjct: 579 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 638

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +     + V Y+ L HGLC  G+  EA  +   M +RGC P+ + YSS++ GLC AG 
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           V EAL  F +M   +    P V  Y+ L++ LCK   I  + + L  M+  G  PD+VT 
Sbjct: 699 VTEALGYFEKM-ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTF 757

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFK---------------RQRTSGGFKIVEVML 627
           +I +  L +       G +    +A R  K               +   S  + ++E M 
Sbjct: 758 SILINGLCDAGRI-DTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMK 816

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              ++  T T   V++ LC   RI  A++
Sbjct: 817 THGIAKNTVTHGIVIKALCGNDRIDEAVS 845



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/526 (30%), Positives = 262/526 (49%), Gaps = 30/526 (5%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K+ +V +A+ L   M+ E      V +FNSVL+ + +E    R L+ +N    A      
Sbjct: 485 KSGMVRDALGLLEFMI-ESGLSPDVITFNSVLDGLCKE---QRILDAHNVFKRALERGCR 540

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T++ +I  + ++  +D A+QL  +M    C  +  TY T++DGL K  R+++AV++
Sbjct: 541 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 600

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +M+  GC P  VT+N LI+G  K   L  A  L+  M   G  P+ VTY TL HGLC 
Sbjct: 601 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 660

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G  D+AV +LD M A  C PN +TY +I++GL K GR  +       M   +      I
Sbjct: 661 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 720

Query: 370 -YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YS LI GL K G+ ++A +  ++M+  G  P+ V +S LI+GLC  G+ D   E+   M
Sbjct: 721 AYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGM 780

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              GC A+ + Y++++  +   G+   A  + ++M  +    N V + ++I  LC + ++
Sbjct: 781 AERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRI 840

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EA + +   +   C+ D ++Y+++I  L  +   E+AL+L   M+       PD   Y 
Sbjct: 841 DEA-VSYFHSIPEDCR-DEISYNTLITSLVASRRSEQALELLRAMVA--DGGSPDACNYM 896

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            +++ L K  +   +  LL  M  RG  PDL T  I ++ L +  + P         LA 
Sbjct: 897 TVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLP---------LAC 947

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             F            E ML+K L P    +  ++   C+  ++  A
Sbjct: 948 DYF------------EEMLRKNLKPDAIVYSSLIDAFCKADKVDDA 981



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 164/552 (29%), Positives = 257/552 (46%), Gaps = 76/552 (13%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N ++N + + G   R  + +     A      P  +T++ VI  +CR   VD   +L 
Sbjct: 3   TYNVLINGLCKAG---RVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLL 59

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  R C P+  TY TL++ L  + R  EA  LL+ M  +GC P  +TF ++I GLCK 
Sbjct: 60  EEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           GE+  A ++VD M  +G +P+   +  L+H LC  G +D+A     +++     P+ VTY
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++GL K GR      VL  + E       + ++  + GL K G    A + +  M +
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEIL-----------FEMINNG------------ 432
            G  PNTV Y ALIDGLC+ GK D A  +L           F  + +G            
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 433 ------CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
                 C  N   ++SLM G  ++ +  +A E++  M ++ C  + + Y++L+ GLC+  
Sbjct: 300 LLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359

Query: 487 KLREA-RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           ++ EA R V     + GC P+VV +S++I GLCNAG V +A +++  M+ +E  S P+ F
Sbjct: 360 RIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS-PNRF 418

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRG---------------------CDPDLVTCNI 584
           TY  LL  LCK  +          M++R                      C P LVT N 
Sbjct: 419 TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNT 478

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            +T L                      K         ++E M++  LSP   T+  V+  
Sbjct: 479 LVTGLS---------------------KSGMVRDALGLLEFMIESGLSPDVITFNSVLDG 517

Query: 645 LCRPKRIQAAIN 656
           LC+ +RI  A N
Sbjct: 518 LCKEQRILDAHN 529



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 233/480 (48%), Gaps = 43/480 (8%)

Query: 134  VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
            ++EA++L   MV E  C+    ++++V++ +++ G    A+     + +A     LP+ +
Sbjct: 559  MDEALQLLAKMV-ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDA---GCLPDAV 614

Query: 194  TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            T+N +I    +   +  A+ L REM      P + TY TL  GLC+  R DEAV +LD M
Sbjct: 615  TYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYM 674

Query: 254  QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLCLKGN 312
               GC P  +T++ +++GLCK G +  A    + M     + P+ + Y+ LI GLC  G 
Sbjct: 675  AARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGR 734

Query: 313  LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
            +D+A   L+RM+ +  +P+ VT+  +INGL   GR   G  +   M ER    + Y Y+ 
Sbjct: 735  IDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNA 794

Query: 373  LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE---------- 422
            +I+    +G+   A  L ++M   G   NTV +  +I  LC   + DEA           
Sbjct: 795  MINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC 854

Query: 423  -----------------------EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
                                   E+L  M+ +G + +A  Y ++M G F++G    A ++
Sbjct: 855  RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKL 914

Query: 460  WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
             ++M       +   Y+++I GL +  +L  A   + +ML +  KPD + YSS+I   C 
Sbjct: 915  LQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCK 974

Query: 520  AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            A  V++A KL           +P +  Y+ ++++LCK      +++++  M  + C+P +
Sbjct: 975  ADKVDDAWKLLRS-----SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGI 1029



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 161/629 (25%), Positives = 273/629 (43%), Gaps = 119/629 (18%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++  +L   M     C     ++N+++N ++ +G   RA E ++ +         P  +
Sbjct: 52  VDKGCKLLEEMAGR-GCAPNAVTYNTLVNALLGQG---RAKEAFSLLERMAANGCPPELI 107

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TF L+IK +C+ G ++ A ++  EM  R   PD+  +  L+  LC+  R+DEA     ++
Sbjct: 108 TFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQV 167

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
            + G  P  VT+N +++GL K G L  A  ++  +      P   T+   + GL   GNL
Sbjct: 168 LLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNL 227

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A    D M  +   PN VTY  +I+GL K G+ +D A  L  + ++      + +S+L
Sbjct: 228 TGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGK-LDIA--LGLLRDKNSQAGMFAFSSL 284

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL +  + E+A++L K M    C PN V +++L++GLC+  + DEA E+   M  +GC
Sbjct: 285 LHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGC 341

Query: 434 AANAFTY------------------------------------SSLMKGFFESGKGHKAV 457
           +A+  TY                                    S+L++G   +G+ ++A 
Sbjct: 342 SADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAW 401

Query: 458 EIWKDM-AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG-------------- 502
           E+++ M A      N   Y+ L+ GLC+ G  R     + QML R               
Sbjct: 402 EVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEV 461

Query: 503 -------CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
                  C+P +V Y++++ GL  +G V +AL L   M+  E    PDV T+N +L+ LC
Sbjct: 462 DFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMI--ESGLSPDVITFNSVLDGLC 519

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE------------------------ 591
           K+  I  + ++    ++RGC P++VT +  +  L +                        
Sbjct: 520 KEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTV 579

Query: 592 ----------KLEAPQDGTDFL---------------NELAIRLFKRQRTSGGFKIVEVM 626
                     K+   +D    L               N L    FKRQR      ++  M
Sbjct: 580 TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           L+    P   T+  +   LCR  R   A+
Sbjct: 640 LEAGFHPSVVTYTTLCHGLCRSGRFDEAV 668



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 239/488 (48%), Gaps = 14/488 (2%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            T+ +++      G  +   +VL +MR    +    ++  +   + K   + EA+ L   M
Sbjct: 580  TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639

Query: 145  VDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
            ++  FH   +V ++ ++ + + + G +  A+E  +++         PN +T++ ++  +C
Sbjct: 640  LEAGFH--PSVVTYTTLCHGLCRSGRFDEAVEILDYMA---ARGCAPNAITYSSIVDGLC 694

Query: 204  RLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            + G V  A+  F +M       P +  Y  L+DGLCK  R+DEA   L+ M   G  P  
Sbjct: 695  KAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDV 754

Query: 263  VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            VTF++LINGLC  G +    +L   M  +GC  +   YN +I+  CLKG    A +LL+ 
Sbjct: 755  VTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEE 814

Query: 323  MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
            M       N VT+G +I  L    R  +      S+ E     +E  Y+TLI+ L    +
Sbjct: 815  MKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--CRDEISYNTLITSLVASRR 872

Query: 383  AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +E A++L + M+  G  P+   Y  ++DGL + G P+ A ++L EM + G + +  TY+ 
Sbjct: 873  SEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTI 932

Query: 443  LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
            ++ G  ++ +   A + +++M + N   + + YS LI   C+  K+ +A   W  + S G
Sbjct: 933  MISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDA---WKLLRSSG 989

Query: 503  CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             +P +  YS+M+  LC     ++AL++  EM       +P +  +  L  A   +  +  
Sbjct: 990  IEPTITMYSTMVDSLCKNRGTDKALEVIREM--KSKNCEPGIHIWTSLATAYVAEGRVDE 1047

Query: 563  SIDLLNSM 570
            ++ L+N +
Sbjct: 1048 AVKLVNDL 1055



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 124/275 (45%), Gaps = 9/275 (3%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
             + ++I  Y   G+F +   +L  M+         +   + KA      ++EA+  FH++
Sbjct: 791  AYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI 850

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             ++  C+  + S+N+++  ++      +ALE    +V        P+   +  V+  + +
Sbjct: 851  PED--CRDEI-SYNTLITSLVASRRSEQALELLRAMVADGGS---PDACNYMTVMDGLFK 904

Query: 205  LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
             G  + A +L +EM  R   PD+ TY  ++ GL K  +L  A    +EM      P  + 
Sbjct: 905  AGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIV 964

Query: 265  FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            ++ LI+  CK  ++  A KL+ +    G  P    Y+T++  LC     DKA+ ++  M 
Sbjct: 965  YSSLIDAFCKADKVDDAWKLLRS---SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMK 1021

Query: 325  ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
            +  C P    + ++    V  GR  +  +++  ++
Sbjct: 1022 SKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           +V Y+ +I+GLC AG V +A   F +   ++   +P V TY+ +++ LC+ + +     L
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRK--AIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKL 58

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           L  M  RGC P+ VT N  + A                     L  + R    F ++E M
Sbjct: 59  LEEMAGRGCAPNAVTYNTLVNA---------------------LLGQGRAKEAFSLLERM 97

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
                 P+  T+  +++ LC+   I+AA
Sbjct: 98  AANGCPPELITFGLIIKGLCKEGEIEAA 125


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 167/530 (31%), Positives = 275/530 (51%), Gaps = 38/530 (7%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D+  Y+ LI      G   +   VL  M     V    ++  +     + + ++EA +L 
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M +      TV ++N++LN + ++       +    +V A      P+T ++N V+  
Sbjct: 186 EKMKESGLTPDTV-AYNALLNGLCKQNQLEEVSKLLEEMVEAGRE---PDTFSYNTVVAC 241

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C  G  + A ++  +M  + C PD+ TY +LMDG CK +++DEA  LL++M    C PT
Sbjct: 242 LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPT 301

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            +T+  LI G  +   L  A +++++MF  G  P+ VTYN L+ GLC  G L++A  LL+
Sbjct: 302 VITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLE 361

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME-ERKFHVNEYIYSTLISGLFKE 380
            MV   C P+ VTY  ++NGL KLG+ VD AR+L+ M  ER    N   ++T+I G  K 
Sbjct: 362 VMVEKDCAPDVVTYSILVNGLCKLGK-VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKA 420

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDG----------------------------- 411
           GK ++  K+ + M E  C P+ V YS LIDG                             
Sbjct: 421 GKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEG 480

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC  GK +EA+E++  M   GC   +  Y+ ++ G  +  +G +A+++ + M++  C  N
Sbjct: 481 LCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPN 540

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              YS+LI+GLC+  ++ +A  V   ML +GC PDV  Y+S+I G C    ++ A + F 
Sbjct: 541 LYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFK 600

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            M   +   +PD   YNIL++  C+  N+  +I+++  M+++GC+PD  T
Sbjct: 601 TMR--DSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAAT 648



 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 182/620 (29%), Positives = 309/620 (49%), Gaps = 81/620 (13%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRM--RREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           +ST+ +LI  ++ +G+ K +  +   M  RR    V+  + I   KAY +   ++ A+  
Sbjct: 24  NSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL--KAYCQIGDLDRALSH 81

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F     +  C  T  ++  +++ + Q     R  E Y  +      +  P+   +N +I 
Sbjct: 82  FRG---KMWCSPTAFTYCILIHGLCQ---CQRIDEAYQLLDEMIQKDCHPDAAVYNCLIA 135

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C++G +D A  + + M  R+C PD+ TY +L+ G C+ N LDEA  L+++M+  G  P
Sbjct: 136 GLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTP 195

Query: 261 TPVTFNVLINGLCKNGEL-------------GR----------------------AAKLV 285
             V +N L+NGLCK  +L             GR                      A K++
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKIL 255

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
           + M  K C P+ VTYN+L+ G C    +D+A  LL+ MV  +C P  +TY T+I G  + 
Sbjct: 256 EKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRA 315

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
            R  D  RV+  M +     +   Y+ L+ GL K GK E+A +L + M+EK C P+ V Y
Sbjct: 316 DRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTY 375

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK---GHKAVEIWKD 462
           S L++GLC++GK D+A  +L  M+  GC  N  T+++++ GF ++GK   GHK +E+ K+
Sbjct: 376 SILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKE 435

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           ++   C  + V YS LI G C+  ++++A  +       G  PD  +YSSM+ GLC+ G 
Sbjct: 436 VS---CTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGK 486

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           VEEA ++ + M   +    P    Y +++  LC       ++ +L  M +RGC+P+L T 
Sbjct: 487 VEEAQEVMDLM--TKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTY 544

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           +I +                       L K +R      +++VML+K   P  +T+  ++
Sbjct: 545 SILING---------------------LCKTKRVEDAINVLDVMLEKGCVPDVATYTSLI 583

Query: 643 QELCRPKRIQAAINKCWSNL 662
              C+  ++ AA  +C+  +
Sbjct: 584 DGFCKINKMDAAY-QCFKTM 602



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 153/499 (30%), Positives = 251/499 (50%), Gaps = 35/499 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI     +        ++ +M+         ++  +     K + +EE  +L   M
Sbjct: 164 TYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEM 223

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V+      T  S+N+V+  + + G Y  A +    ++  K     P+ +T+N ++   C+
Sbjct: 224 VEAGREPDTF-SYNTVVACLCESGKYEEAGKILEKMIEKK---CGPDVVTYNSLMDGFCK 279

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +  +D A +L  +M  R C P + TY TL+ G  + +RL +A  ++++M   G  P  VT
Sbjct: 280 VSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVT 339

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++GLCK G+L  A +L++ M  K C P+ VTY+ L++GLC  G +D A  LL+ M+
Sbjct: 340 YNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMML 399

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG-------- 376
              C PN VT+ T+I+G  K G+  +G +VL  M+E     +   YSTLI G        
Sbjct: 400 ERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQ 459

Query: 377 ---------------------LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
                                L   GK E+A ++   M ++GC P +  Y+ +I GLC V
Sbjct: 460 DAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDV 519

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            + DEA ++L  M   GC  N +TYS L+ G  ++ +   A+ +   M +  CV +   Y
Sbjct: 520 ERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATY 579

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + LI G C+  K+  A   +  M   GC+PD +AY+ +I G C +G+VE+A+++   M  
Sbjct: 580 TSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLM-- 637

Query: 536 LEPKSQPDVFTYNILLNAL 554
           LE    PD  TY  L+ +L
Sbjct: 638 LEKGCNPDAATYFSLMRSL 656



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/475 (30%), Positives = 226/475 (47%), Gaps = 58/475 (12%)

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
            FRE      +P   TY  L+ G  +       + + +EM      P  +T N ++   C
Sbjct: 11  FFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYC 70

Query: 274 KNGELGRAA---------------------------------KLVDNMFLKGCLPNEVTY 300
           + G+L RA                                  +L+D M  K C P+   Y
Sbjct: 71  QIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVY 130

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-ME 359
           N LI GLC  G +D A ++L  M+   C+P+ +TY ++I G  +   A+D AR LM  M+
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQT-NALDEARKLMEKMK 189

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E     +   Y+ L++GL K+ + E+  KL ++M+E G +P+T  Y+ ++  LC  GK +
Sbjct: 190 ESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYE 249

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA +IL +MI   C  +  TY+SLM GF +  K  +A  + +DM    C    + Y+ LI
Sbjct: 250 EAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI 309

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G     +L +A  V   M   G  PD+V Y+ ++ GLC AG +EEA +L   M  +E  
Sbjct: 310 GGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM--VEKD 367

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             PDV TY+IL+N LCK   +  +  LL  M++RGC P+LVT N  +           DG
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMI-----------DG 416

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                       K  +   G K++E+M +   +P   T+  ++   C+  R+Q A
Sbjct: 417 ----------FCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA 461


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  285 bits (729), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 264/499 (52%), Gaps = 25/499 (5%)

Query: 177 YNHIVNAKH----MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           Y H+  A+     M + P+  T+  +I+ +C  G V +A+ L  +M  R C+P++ TY  
Sbjct: 123 YGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 182

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++ +CK +  ++A+ +LDEM+  GC P  VT+NV+ING+C+ G +  A  L++ +F  G
Sbjct: 183 LLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG 242

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C P+ V+Y TL+ GLC     D    L   M+   CMPNEVT+  +I    + G      
Sbjct: 243 CQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 302

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           +VL  M E +   N  + + +I+ + K+G+ +DA K    M   GC P+T+ Y+ ++ GL
Sbjct: 303 QVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGL 362

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           CR  + ++A+E+L EM+ N C  N  T+++ +    + G   +A+ + + M ++ C    
Sbjct: 363 CRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGV 422

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ L++G C  G +  A  ++  M    CKP+ + Y++++ GLCNA  ++ A +L  E
Sbjct: 423 VTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAE 479

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M  L     P+V T+N+L+N  C++  +  +I+L+  MM+ GC P+L+T N     + + 
Sbjct: 480 M--LHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKD 537

Query: 593 LEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTST 637
             + +D  + L+ L  +               L K  R     ++  +     + P+   
Sbjct: 538 CSS-EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALV 596

Query: 638 WERVVQELCRPKRIQAAIN 656
           + +++  LC+   I  AI+
Sbjct: 597 YNKILLGLCKRHEIDNAID 615



 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 152/479 (31%), Positives = 253/479 (52%), Gaps = 22/479 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +   +N ++   CR G +D A +L   MPV    PD YTY  L+  LC   R+ +A+ LL
Sbjct: 109 DVFAYNTLVAGYCRYGHLDAARRLIGSMPV---APDAYTYTPLIRVLCDRGRVADALSLL 165

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+M   GC P  VT+ VL+  +CKN    +A  ++D M  KGC PN VTYN +I+G+C +
Sbjct: 166 DDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCRE 225

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D A  LL+R+ +  C P+ V+Y T++ GL    R  D   +   M E+    NE  +
Sbjct: 226 GRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTF 285

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             LI    + G  E A+++ +QM E  C  NT + + +I+ +C+ G+ D+A + L  M +
Sbjct: 286 DMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGS 345

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC  +  +Y++++KG   + + + A E+ K+M +NNC  NEV ++  I  LC+ G + +
Sbjct: 346 YGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQ 405

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A M+  QM   GC   VV Y+++++G C  G ++ AL+LF  M C     +P+  TY  L
Sbjct: 406 AIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPC-----KPNTITYTTL 460

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT------ALKEKLEAPQDGTDF-- 602
           L  LC    +  + +L+  M+ R C P++VT N+ +        L E +E  +   +   
Sbjct: 461 LTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGC 520

Query: 603 ------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  N L   + K   +    +++  ++ K +SP   T+  ++  L +  R++ AI
Sbjct: 521 TPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAI 579



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 261/551 (47%), Gaps = 49/551 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + +L+  Y   G   +   ++  M            I +    G+   V +A+ L   M
Sbjct: 112 AYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGR---VADALSLLDDM 168

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C+  V ++  +L  + +   + +A+   + +   +     PN +T+N++I  +CR
Sbjct: 169 LRR-GCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEM---RAKGCTPNIVTYNVIINGMCR 224

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD+A  L   +    C+PD  +Y TL+ GLC   R D+   L  EM    C P  VT
Sbjct: 225 EGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVT 284

Query: 265 F-----------------------------------NVLINGLCKNGELGRAAKLVDNMF 289
           F                                   N++IN +CK G +  A K ++NM 
Sbjct: 285 FDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMG 344

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC P+ ++Y T++ GLC     + A  LL  MV + C PNEVT+ T I  L + G   
Sbjct: 345 SYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIE 404

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               ++  M+E    V    Y+ L++G   +G  + A++L++ M    CKPNT+ Y+ L+
Sbjct: 405 QAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLL 461

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   + D A E++ EM++  C  N  T++ L+  F + G   +A+E+ + M ++ C 
Sbjct: 462 TGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCT 521

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N + Y+ L  G+ +D    +A  +   ++S+G  PDV+ +SS+I  L     VEEA+++
Sbjct: 522 PNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQM 581

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+  L  +   +P    YN +L  LCK+  I ++ID L  M+  GC P+  T  I +  L
Sbjct: 582 FH--LAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGL 639

Query: 590 KEK--LEAPQD 598
             +  L+  QD
Sbjct: 640 AREGLLKEAQD 650



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 220/430 (51%), Gaps = 9/430 (2%)

Query: 75  KLGSY--QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH 132
           +L SY  Q    ++ +L++    S  +  +E +   M  +  +  E +F  + + + +  
Sbjct: 237 RLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGG 296

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           +VE AI++   M  E  C       N V+N I ++G    A +F N   N       P+T
Sbjct: 297 MVERAIQVLQQMT-EHECATNTTLCNIVINSICKQGRVDDAFKFLN---NMGSYGCNPDT 352

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +++  V+K +CR    ++A +L +EM   NC P+  T+ T +  LC++  +++A++L+++
Sbjct: 353 ISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQ 412

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           MQ  GC    VT+N L+NG C  G +  A +L  +M    C PN +TY TL+ GLC    
Sbjct: 413 MQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAER 469

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A  L+  M+   C PN VT+  ++N   + G   +   ++  M E     N   Y+T
Sbjct: 470 LDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNT 529

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L  G+ K+  +EDA++L   ++ KG  P+ + +S++I  L +  + +EA ++     + G
Sbjct: 530 LFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIG 589

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
               A  Y+ ++ G  +  +   A++    M  N C+ NE  Y +LI GL  +G L+EA+
Sbjct: 590 MRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQ 649

Query: 493 MVWTQMLSRG 502
            + + + SRG
Sbjct: 650 DLLSMLCSRG 659



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 194/419 (46%), Gaps = 34/419 (8%)

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
           DG  P       LI  LC+ G    AA+++      G   +   YNTL+ G C  G+LD 
Sbjct: 69  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 128

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  L+  M  +   P+  TY  +I  L   GR  D   +L  M  R    N   Y+ L+ 
Sbjct: 129 ARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 185

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
            + K    E AM +  +M  KGC PN V Y+ +I+G+CR G+ D+A ++L  + + GC  
Sbjct: 186 AMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQP 245

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  +Y++L+KG   S +     E++ +M + NC+ NEV + +LI   C  G +  A  V 
Sbjct: 246 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 305

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            QM    C  +    + +I+ +C  G V++A K  N M        PD  +Y  +L  LC
Sbjct: 306 QQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSY--GCNPDTISYTTVLKGLC 363

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           +    + + +LL  M+   C P+ VT N F+  L +K          L E AI L ++ +
Sbjct: 364 RAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQK---------GLIEQAIMLIEQMQ 414

Query: 616 TSG-------------GFKI---VEVMLQKFLS----PQTSTWERVVQELCRPKRIQAA 654
             G             GF +   ++  L+ F S    P T T+  ++  LC  +R+ AA
Sbjct: 415 EHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAA 473



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/207 (21%), Positives = 81/207 (39%), Gaps = 56/207 (27%)

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL---------------FNEMLC 535
           AR+V       G  PDV   + +I  LC  G   +A ++               +N ++ 
Sbjct: 59  ARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVA 118

Query: 536 -------LEPKSQ--------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
                  L+   +        PD +TY  L+  LC +  ++ ++ LL+ M+ RGC P++V
Sbjct: 119 GYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVV 178

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
           T  + L A                     + K         +++ M  K  +P   T+  
Sbjct: 179 TYTVLLEA---------------------MCKNSGFEQAMAVLDEMRAKGCTPNIVTYNV 217

Query: 641 VVQELCRPKRIQAA---INKCWSNLYG 664
           ++  +CR  R+  A   +N+ +S  YG
Sbjct: 218 IINGMCREGRVDDARDLLNRLFS--YG 242


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  285 bits (728), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 185/638 (28%), Positives = 309/638 (48%), Gaps = 39/638 (6%)

Query: 26  SLTTIPSERSHRFFSVRS-AVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDS 84
           +L   P  R HR   +R  A+S   ++    +  +  E      + NS      +    +
Sbjct: 33  ALRPQPRRRGHRPAPLRVYAISDQDRLLAALREQSDPEAAL--RMLNSALAREDFAPSSA 90

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREK---RVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
            +  ++Q    +G F  +E ++  MRRE    R V+ +SF+   ++Y +    ++A+ L 
Sbjct: 91  VYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFV---ESYARLRRFDDAVDLV 147

Query: 142 HTMVDE--FHCKRTVKSFNSVLNVIIQEGLYHRALE-FYNHIVNAKHMNILPNTLTFNLV 198
              +D   F  +     FN +LNV++ EG   + LE  YN +       I P+ +T N +
Sbjct: 148 LNQLDNDTFGVQADTVVFNHLLNVLV-EGSKLKLLESVYNEMTG---RGIQPDVVTLNTL 203

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           IK +CR   V  A+ +  EM      PD  T+ TLM G  +E  ++ A+ +  +M   GC
Sbjct: 204 IKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGC 263

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            PT VT NVLING CK G +  A   +      G  P++VTYNT +HGLC  G++  A+ 
Sbjct: 264 SPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALK 323

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           ++D M+     P+  TY T+IN L K G   +   ++  M +R    +   ++TLI  L 
Sbjct: 324 VMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALS 383

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
            + + E+A+ L +++  KG  P+   ++ LI+ LC+VG P     +  EM ++GC  +  
Sbjct: 384 SQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEV 443

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TY+ L+      GK   A+++  +M  N C  + V Y+ +I  LC+  ++ EA  V+ QM
Sbjct: 444 TYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQM 503

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
            ++G     V ++++I GLC A  +++A +L  +M  ++   QP+  TYN +L   CKQ 
Sbjct: 504 DAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQM--VKEGLQPNNITYNSILTHYCKQG 561

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           NI  + D+L +M   G + D+VT    +                       L K  RT  
Sbjct: 562 NIKKAADILETMTANGFEIDVVTYGTLING---------------------LCKAGRTQV 600

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             K++  M  K + P    +  V+Q L R   ++ A+N
Sbjct: 601 ALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALN 638



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 145/506 (28%), Positives = 253/506 (50%), Gaps = 7/506 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T  +LI+    +   ++  ++L  M        E +F  + + + +   +E A+R+   M
Sbjct: 199 TLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKM 258

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E  C  T  + N ++N   + G    AL +    +        P+ +T+N  +  +C+
Sbjct: 259 M-EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIAD---GFEPDQVTYNTFVHGLCQ 314

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V +A+++   M     +PD++TY T+++ L K   LDEA  ++++M   GC P   T
Sbjct: 315 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 374

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI  L     L  A  L   + +KG  P+  T+N LI+ LC  G+    + L + M 
Sbjct: 375 FNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 434

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +S C P+EVTY  +I+ L  +G+  +   +L  ME      +   Y+T+I  L K+ + E
Sbjct: 435 SSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIE 494

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +++ QM  +G   + V ++ LIDGLC+  + D+A E++ +M+  G   N  TY+S++
Sbjct: 495 EAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSIL 554

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             + + G   KA +I + M  N    + V Y  LI+GLC+ G+ + A  +   M  +G +
Sbjct: 555 THYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 614

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN-ISHS 563
           P   AY+ +I  L    ++ +AL LF EM   E    PD  TY I+  +LC+    I  +
Sbjct: 615 PTPKAYNPVIQSLFRRNNLRDALNLFREM--TEVGEPPDALTYKIVFRSLCRGGGPIKEA 672

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
            D L  M+++G  P+  +  +    L
Sbjct: 673 FDFLVEMVNKGFMPEFSSFRMLAEGL 698



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 227/476 (47%), Gaps = 42/476 (8%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           ++TF +L+Q +   G  ++   V  +M          +   +   Y K   VE+A+    
Sbjct: 232 ETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQ 291

Query: 143 T-MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             + D F   +   ++N+ ++ + Q G    AL+  + ++   H    P+  T+N VI  
Sbjct: 292 QEIADGFEPDQV--TYNTFVHGLCQNGHVSHALKVMDLMLQEGHD---PDVFTYNTVINC 346

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           + + G +D A  +  +M  R C PD  T+ TL+  L  +NRL+EA+ L  E+ V G  P 
Sbjct: 347 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPD 406

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             TFN+LIN LCK G+     +L + M   GC P+EVTYN LI  LC  G L  A+ LL+
Sbjct: 407 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLN 466

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M ++ C  + VTY TII+ L K  R  +   V   M+ +    +   ++TLI GL K  
Sbjct: 467 EMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAK 526

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + +DA +L +QM+++G +PN + Y++++   C+ G   +A +IL  M  NG   +  TY 
Sbjct: 527 RIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYG 586

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNC-----VYNEV----------------------- 473
           +L+ G  ++G+   A+++ + M           YN V                       
Sbjct: 587 TLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEV 646

Query: 474 -------CYSVLIHGLCEDG-KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
                   Y ++   LC  G  ++EA     +M+++G  P+  ++  +  GL N G
Sbjct: 647 GEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 702



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 173/371 (46%), Gaps = 40/371 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I   + +G+    + ++ +M     +    +F  +  A    + +EEA+ L   +
Sbjct: 339 TYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLAREL 398

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V +FN ++N + + G  H  +  +  +   K     P+ +T+N++I  +C 
Sbjct: 399 TVK-GLSPDVYTFNILINALCKVGDPHLGIRLFEEM---KSSGCTPDEVTYNILIDHLCS 454

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G + NA+ L  EM    C     TY T++D LCK+ R++EA  + D+M   G   + VT
Sbjct: 455 MGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVT 514

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI+GLCK   +  A +L++ M  +G  PN +TYN+++   C +GN+ KA  +L+ M 
Sbjct: 515 FNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMT 574

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A+    + VTYGT+INGL K GR     ++L  M  +        Y+ +I  LF+     
Sbjct: 575 ANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLR 634

Query: 385 DAMKLWKQMME------------------------------------KGCKPNTVVYSAL 408
           DA+ L+++M E                                    KG  P    +  L
Sbjct: 635 DALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRML 694

Query: 409 IDGLCRVGKPD 419
            +GL  +G  D
Sbjct: 695 AEGLLNLGMDD 705


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  284 bits (727), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 175/565 (30%), Positives = 285/565 (50%), Gaps = 32/565 (5%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVV---LEKSFIFIFKAYGKAHLVEEAIRLFH 142
           +  +I+    +G F  +++++  MRRE   V   L +SFI    +Y +  L ++A  L  
Sbjct: 93  YEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFI---GSYARLQLFDDAFDLVS 149

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             +D F  +   + +N +L V+  EG   + LE  +         I P+ +TFN VI  +
Sbjct: 150 NQLDMFGVQANTEVYNHLLTVL-AEGSKIKLLE--SAYTEMSSQGIEPDVVTFNTVIDAL 206

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CR      A+ +  EM   +  PD  T+ TLM+G  +E  ++ A+ L   M   GC PT 
Sbjct: 207 CRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTS 266

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT NVLING CK G +G A   +      G  P+ VT++T ++GLC  G++D A+ +L  
Sbjct: 267 VTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGL 326

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+   C P+  TY T+IN L   G   +   ++  M +     +   ++TLI  L  E +
Sbjct: 327 MLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQ 386

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            E+A+ L +++  KG  PN   ++ LI+ LC+VG P  A  +  EM ++GC  +  TY+ 
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNI 446

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+     SGK  KA+++ K+M  + C  + V Y+ +I GLC+  ++ EA  V+ QM   G
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTG 506

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
              + + ++++I GLCNA  +++A +L ++M  +    QP+  TYN +L   CKQ NIS 
Sbjct: 507 IGRNAITFNTLIDGLCNAERIDDAAELVDQM--ISEGLQPNNVTYNSILTHYCKQGNISK 564

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           + D+L +M   G + D+VT    +                       L K +RT    K+
Sbjct: 565 AADILQTMTANGFEVDVVTYATLING---------------------LCKARRTQAALKL 603

Query: 623 VEVMLQKFLSPQTSTWERVVQELCR 647
           +  M  K + P    +  V+Q L R
Sbjct: 604 LRGMRMKGMKPTPKAYNPVIQSLFR 628



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 251/506 (49%), Gaps = 7/506 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF ++I     +   ++  ++L  M        E +F  + + + +   +E A+RL   M
Sbjct: 198 TFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARM 257

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E  C  T  + N ++N   + G    AL +    +        P+ +TF+  +  +C+
Sbjct: 258 -SEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD---GFEPDRVTFSTFVNGLCQ 313

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD+A+++   M    CEPD+YTY T+++ LC    L+EA  ++++M   GC P   T
Sbjct: 314 NGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTT 373

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI  LC   +L  A  L   + +KG  PN  T+N LI+ LC  G+   AV L + M 
Sbjct: 374 FNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMK 433

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +S C P+EVTY  +I+ L   G+      +L  ME      +   Y+T+I GL K  + E
Sbjct: 434 SSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIE 493

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +++ QM   G   N + ++ LIDGLC   + D+A E++ +MI+ G   N  TY+S++
Sbjct: 494 EAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSIL 553

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             + + G   KA +I + M  N    + V Y+ LI+GLC+  + + A  +   M  +G K
Sbjct: 554 THYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMK 613

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN-ISHS 563
           P   AY+ +I  L    +  +AL LF EM   E    PD FTY I+   LC+    I  +
Sbjct: 614 PTPKAYNPVIQSLFRGNNGRDALSLFREM--TEVGGPPDAFTYKIVFRGLCRGGGPIKEA 671

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
            D L  M D G  P+  +  +    L
Sbjct: 672 FDFLVEMADNGFIPEFSSFRMLAEGL 697



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 218/476 (45%), Gaps = 42/476 (8%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           ++TF +L++ +   G  ++   +  RM          +   +   Y K   V +A+    
Sbjct: 231 ETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQ 290

Query: 143 T-MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             + D F   R   +F++ +N + Q G    AL+    ++        P+  T++ VI  
Sbjct: 291 QEIADGFEPDRV--TFSTFVNGLCQNGHVDHALKVLGLML---QEGCEPDVYTYSTVINC 345

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C  G ++ A  +  +M    C PD  T+ TL+  LC EN+L+EA+ L  E+ V G  P 
Sbjct: 346 LCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPN 405

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             TFN+LIN LCK G+   A +L + M   GC P+EVTYN LI  LC  G L KA+ LL 
Sbjct: 406 VYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLK 465

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M  S C  + VTY TII+GL K  R  +   V   M+      N   ++TLI GL    
Sbjct: 466 EMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAE 525

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + +DA +L  QM+ +G +PN V Y++++   C+ G   +A +IL  M  NG   +  TY+
Sbjct: 526 RIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYA 585

Query: 442 SLMKGF-----------------------------------FESGKGHKAVEIWKDMAKN 466
           +L+ G                                    F    G  A+ ++++M + 
Sbjct: 586 TLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEV 645

Query: 467 NCVYNEVCYSVLIHGLCEDG-KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
               +   Y ++  GLC  G  ++EA     +M   G  P+  ++  +  GL N G
Sbjct: 646 GGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGLLNLG 701



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 156/358 (43%), Gaps = 28/358 (7%)

Query: 303 LIHGLCLKGNLDKAVSLLDRMVA--SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           L+  L  + + + A+ +L+  +A      P+   Y  II  L   G A D  +VL+    
Sbjct: 59  LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAG-AFDLMKVLVGEMR 117

Query: 361 RKFH-VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKP 418
           R+ H V   +  + I    +    +DA  L    ++  G + NT VY+ L+  L    K 
Sbjct: 118 REGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKI 177

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
              E    EM + G   +  T+++++     + +   AV + ++M+  +   +E  ++ L
Sbjct: 178 KLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTL 237

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           + G  E+G +  A  +  +M   GC P  V  + +I+G C  G V +AL    + +    
Sbjct: 238 MEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIA--D 295

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
             +PD  T++  +N LC+  ++ H++ +L  M+  GC+PD+ T +  +  L    E  + 
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEE- 354

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                                  IV  M+     P T+T+  ++  LC   +++ A++
Sbjct: 355 --------------------AKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALD 392


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 186/645 (28%), Positives = 318/645 (49%), Gaps = 64/645 (9%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFKA 127
           IFNS  K   ++    T+  +I+     G+F ++E VL  MR      +LE  ++   + 
Sbjct: 26  IFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRN 85

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           YG+   V+EA+ +F  M D ++C+ ++ S+N+++N++++ G +++A + Y   +  KH  
Sbjct: 86  YGRKGKVQEAVDVFERM-DFYNCEPSIFSYNAIMNILVEYGYFNQAHKVY---LRMKHEG 141

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I P+  TF + IK+ CR      A++L   MP + CE +   YCT++ G  +EN   EA 
Sbjct: 142 IAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAY 201

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L ++M   G FP   TFN L++ LCK G L    KL++ +   G  PN  T+N  I GL
Sbjct: 202 ELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGL 261

Query: 308 CLKGNLDKAVS-------LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           C KG L+ A S        L +MV     P++ TY TII G  K+G+  D +R+L   + 
Sbjct: 262 CRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKF 321

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           + F  +E+ Y +LI G+ ++G  + A+ L+++ + KG KP+ V+Y+ LI GL + G   +
Sbjct: 322 KGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLK 381

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A +++ +M   G + + +TY+ ++ G  + G    A  +         + +   ++ LI 
Sbjct: 382 ALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLID 441

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C+  K+  A  +   M S G  PDV+ Y+S+++GLC A   E+ ++ F   + +E   
Sbjct: 442 GYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFK--MIMEKGC 499

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV-------------------- 580
            P++ TYNIL+ +LCK   ++ ++DLL  + +RG  PD V                    
Sbjct: 500 LPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQ 559

Query: 581 ----------------TCNIFLTALKEKLEAPQ-------------DGTDFLNELAIRLF 611
                           T NI + A  EKL+                D   +   + I  F
Sbjct: 560 LFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGF 619

Query: 612 -KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            K    + G+  +   ++    P  +T+ RV+  LC   R+  A+
Sbjct: 620 CKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAV 664



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 250/479 (52%), Gaps = 24/479 (5%)

Query: 139 RLFHTMVDEFHCKRTVKSFNSVL-----------NVIIQ--------EGLYHRALEFYNH 179
           +L H +  + H +   K  N VL           N+ IQ        EG   + +E  N+
Sbjct: 221 KLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENY 280

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +    +  + P+  T+N +I    ++G + +A ++ ++   +   PD +TYC+L+ G+C+
Sbjct: 281 LHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQ 340

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +  +D A+ L +E    G  P+ V +N LI GL + G + +A +L+++M  +G  P+  T
Sbjct: 341 DGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWT 400

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN +I+GLC  G +  A +LL+  +A   +P+  T+ T+I+G  K  +  +   +L SM 
Sbjct: 401 YNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMW 460

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 +   Y+++++GL K  K ED M+ +K +MEKGC PN + Y+ LI+ LC+  K  
Sbjct: 461 SHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVT 520

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVL 478
           EA ++L E+ N G   +  ++ +++ GF  +G   +A ++++ M +   + + V  Y+++
Sbjct: 521 EALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIM 580

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I+   E   +  A+ ++ +M  +GC PD   Y  MI G C  G+V         +  +E 
Sbjct: 581 INAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFL--LKEIEI 638

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
              P + T+  ++N LC Q  +  ++ +++ M+  G  P+ V   IF  A K+ + AP+
Sbjct: 639 GFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV-TIF-DADKKAVAAPK 695



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 59/303 (19%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKR--------------------TVKSFNSVLNVIIQ 166
           A  K +L +  I  F+T++D + CKR                     V ++NS+LN + +
Sbjct: 424 AIAKGYLPD--IFTFNTLIDGY-CKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCK 480

Query: 167 EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
                  +E +  I+       LPN +T+N++I+++C+   V  A+ L  E+  R   PD
Sbjct: 481 AAKPEDVMETFKMIMEK---GCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPD 537

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEM--QVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
             ++ T++ G C    LDEA  L   M  Q   C  T  T+N++IN   +  ++  A KL
Sbjct: 538 PVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICH-TVATYNIMINAFSEKLDMDMAQKL 596

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN---- 340
              M  KGC P+  TY  +I G C  GN++     L + +    +P+  T+G +IN    
Sbjct: 597 FHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCV 656

Query: 341 --------GLVKL------------------GRAVDGARVLMSMEERKFHVNEYIYSTLI 374
                   G+V L                   +AV   ++++    +K H+  Y Y  L 
Sbjct: 657 QHRVHEAVGIVHLMVRTGVVPEAVVTIFDADKKAVAAPKIIVEDLLKKSHITYYAYELLY 716

Query: 375 SGL 377
            G+
Sbjct: 717 DGI 719


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  283 bits (724), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 278/534 (52%), Gaps = 24/534 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V +A R+F  +        TV ++N+++N   + G    A    N       M   P+T 
Sbjct: 203 VSDAERVFAALGP----SATVVTYNTMVNGYCRAGRIEDARRLING------MPFPPDTF 252

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN +I+ +C  G + +A+ +F +M  R C P + TY  L+D  CKE+   +A+ LLDEM
Sbjct: 253 TFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEM 312

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  GC P  VT+NVLIN +C  G++  A  ++ N+   GC P+ VTY  ++  LC     
Sbjct: 313 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERW 372

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +   LL  M ++ C P+EVT+ TI+  L + G       V+  M E     +   YS++
Sbjct: 373 KEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSI 432

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL   G+ +DA++L  ++   GCKP+T+ Y+ ++ GLC   + + AEE++ EM+ + C
Sbjct: 433 LDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDC 492

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  T+++++    + G   +A+ + + M++N C  + V Y+ +I GLC +  + +A  
Sbjct: 493 PPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAME 552

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           + + + S GCKPD+V +++++ GLC     E+A +L   M  +     PD  T+N ++ +
Sbjct: 553 LLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANM--MRSNCPPDELTFNTVITS 610

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQDGTDFL- 603
           LC++  ++ +I+ L  M + GC P+  T +I + AL          E L    +GT  L 
Sbjct: 611 LCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLI 670

Query: 604 --NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             N +   L K  +      ++ VM+   L P T+T+  +   +CR      A+
Sbjct: 671 TYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAV 724



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 230/456 (50%), Gaps = 8/456 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA+ +   +     CK    ++  VL  +     +    E    + +    N  P+ +
Sbjct: 337 VDEALNILSNL-PSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSN---NCAPDEV 392

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN ++ ++C+ GLVD AI++   M    C  DI TY +++DGLC   R+D+AV LL  +
Sbjct: 393 TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL 452

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  GC P  + +  ++ GLC   +  RA +L+  M    C P+EVT+NT++  LC KG +
Sbjct: 453 KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLV 512

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A+ ++++M  + C P+ VTY  II+GL       D   +L  ++      +   ++TL
Sbjct: 513 DRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTL 572

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL    + EDA +L   MM   C P+ + ++ +I  LC+ G   +A E L  M  NGC
Sbjct: 573 LKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGC 632

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N+ TYS ++    ++GK   A+E+   M   N   + + Y+ +I  L + GK+ EA  
Sbjct: 633 VPNSSTYSIVVDALLKAGKAQAALELLSGM--TNGTPDLITYNTVISNLTKAGKMEEALD 690

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   M+S G  PD   Y S+ +G+C     + A+++   +   +    PD   YN +L  
Sbjct: 691 LLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQ--DTGLSPDTTFYNDVLLG 748

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            C+      +ID    M+  GC PD  T  I L AL
Sbjct: 749 FCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEAL 784



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 246/491 (50%), Gaps = 10/491 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI    N GD      +L  +          ++  + K+   +   +E   L   M
Sbjct: 323 TYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEM 382

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
               +C     +FN+++  + Q+GL  RA+E  +H+  ++H   + + +T++ ++  +C 
Sbjct: 383 TSN-NCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHM--SEH-GCVADIVTYSSILDGLCD 438

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G VD+A++L   +    C+PD   Y T++ GLC   + + A  L+ EM    C P  VT
Sbjct: 439 VGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVT 498

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN ++  LC+ G + RA ++V+ M   GC P+ VTYN +I GLC +  +D A+ LL  + 
Sbjct: 499 FNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQ 558

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  C P+ VT+ T++ GL  + R  D  +++ +M       +E  ++T+I+ L ++G   
Sbjct: 559 SCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLT 618

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A++  K M E GC PN+  YS ++D L + GK   A E+L  M N     +  TY++++
Sbjct: 619 QAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVI 676

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC-EDGKLREARMVWTQMLSRGC 503
               ++GK  +A+++ + M  N    +   Y  L +G+C EDG  R  RM+  ++   G 
Sbjct: 677 SNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRML-RRVQDTGL 735

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PD   Y+ ++ G C     + A+  F  M+       PD  TY ILL AL     +  +
Sbjct: 736 SPDTTFYNDVLLGFCRDRRTDLAIDCFAHMV--SSGCMPDESTYVILLEALAYGGLLDEA 793

Query: 564 IDLLNSMMDRG 574
             LL S+   G
Sbjct: 794 KRLLASLCSLG 804



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/499 (27%), Positives = 237/499 (47%), Gaps = 82/499 (16%)

Query: 237 LCKENRLDEAVLLLDEMQVDG---CFPTPVTFNVLINGLCKNGE----------LGRAAK 283
           L +   +DEA++L D M   G   C P  V  N+LI  LC +G           LG +A 
Sbjct: 160 LVQRGEIDEALVLFDSMASGGGRNCPPV-VPCNILIKRLCSDGRVSDAERVFAALGPSAT 218

Query: 284 LVD-NMFLKG-C-----------------LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +V  N  + G C                  P+  T+N LI  LC++G +  A+++ D M+
Sbjct: 219 VVTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDML 278

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C P+ VTY  +++   K         +L  M  +    +   Y+ LI+ +  EG  +
Sbjct: 279 HRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVD 338

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ +   +   GCKP+ V Y+ ++  LC   +  E EE+L EM +N CA +  T+++++
Sbjct: 339 EALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIV 398

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
               + G   +A+E+   M+++ CV + V YS ++ GLC+ G++ +A  + +++ S GCK
Sbjct: 399 TSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 458

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE-PKSQ---------------------- 541
           PD +AY++++ GLC+    E A +L  EMLC + P  +                      
Sbjct: 459 PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRV 518

Query: 542 ----------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
                     PD+ TYN +++ LC +S I  +++LL+ +   GC PD+VT N  L  L  
Sbjct: 519 VEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCG 578

Query: 590 ------KEKLEA-------PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
                  E+L A       P D   F N +   L ++   +   + +++M +    P +S
Sbjct: 579 VDRWEDAEQLMANMMRSNCPPDELTF-NTVITSLCQKGLLTQAIETLKIMAENGCVPNSS 637

Query: 637 TWERVVQELCRPKRIQAAI 655
           T+  VV  L +  + QAA+
Sbjct: 638 TYSIVVDALLKAGKAQAAL 656



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/148 (33%), Positives = 81/148 (54%), Gaps = 12/148 (8%)

Query: 444 MKGFFESGKGHKAVEIWKDMAKN---NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++   + G+  +A+ ++  MA     NC     C ++LI  LC DG++ +A  V+  +  
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRNCPPVVPC-NILIKRLCSDGRVSDAERVFAAL-- 213

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G    VV Y++M++G C AG +E+A +L N M        PD FT+N L+ ALC +  I
Sbjct: 214 -GPSATVVTYNTMVNGYCRAGRIEDARRLINGM-----PFPPDTFTFNPLIRALCVRGRI 267

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
             ++ + + M+ RGC P +VT +I L A
Sbjct: 268 PDALAVFDDMLHRGCSPSVVTYSILLDA 295



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 6/210 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF ++I      G        L  M     V    ++  +  A  KA   + A+ L   M
Sbjct: 603 TFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +       + ++N+V++ + + G    AL+    +V+     + P+T T+  +   VCR
Sbjct: 663 TNG---TPDLITYNTVISNLTKAGKMEEALDLLRVMVSN---GLCPDTTTYRSLAYGVCR 716

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               D A+++ R +      PD   Y  ++ G C++ R D A+     M   GC P   T
Sbjct: 717 EDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDEST 776

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           + +L+  L   G L  A +L+ ++   G L
Sbjct: 777 YVILLEALAYGGLLDEAKRLLASLCSLGVL 806


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  283 bits (723), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 185/596 (31%), Positives = 297/596 (49%), Gaps = 35/596 (5%)

Query: 64  PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF 123
           P S ++F        Y      +Y LI    N G+FK ++ +L +M+ E  V  E  FI 
Sbjct: 75  PTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFIL 134

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE-FYNHIVN 182
           I + YGKA L  +A RL   M   +  + T KS+N VL +++       A   FY+ +  
Sbjct: 135 IMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSR 194

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
                I P   TF +V+K  C +  VD+A  L R+M    C P+   Y  L+  L + NR
Sbjct: 195 G----ISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           ++EA+ LL+EM + GC P   TFN +I+GLCK G +  AAKL D M L+    + +    
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEER 361
           L+HGLC  G +D+A ++L ++      PN V Y T+ING V  GR  +   +L  +M   
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPN----PNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            F  + + ++ +I GL K+G    A++   +M++KG +PN + Y+ LIDG C+ G  +EA
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            +++  M   G + N   Y+ L+    + GK   A++++ +M+   C  +   ++ LI+G
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC++ K+ EA  ++  ML  G   + V Y+++IH       +++A KL  EM     +  
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEM---RFRGC 543

Query: 542 P-DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           P D  TYN L+ ALCK       + L+  M      P + +CNI + +     +   D  
Sbjct: 544 PLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKV-NDAL 602

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            FL +                    M+Q+ L+P   T+  ++  LC+  R Q A+N
Sbjct: 603 QFLRD--------------------MIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 230/493 (46%), Gaps = 69/493 (13%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH---- 179
           +  A  + + V EA++L   M     C+  V++FN V++ + + G  H A + ++     
Sbjct: 241 LIHALSENNRVNEAMKLLEEMF-LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLR 299

Query: 180 ------IVNAKHMNIL------------------PNTLTFNLVIKTVCRLGLVDNAIQL- 214
                 ++    M+ L                  PNT+ +N +I      G  + A  L 
Sbjct: 300 DFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLL 359

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           ++ M +   EPD +T+  ++DGLCK+  L  A+  LDEM   G  P  +T+ +LI+G CK
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G    A+K+V++M  KG   N V YN LI  LC  G +  A+ +   M +  C P+  T
Sbjct: 420 QGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYT 479

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           +                                   ++LI GL K  K E+A+ L++ M+
Sbjct: 480 F-----------------------------------NSLIYGLCKNDKMEEALGLYRDML 504

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            +G   NTV Y+ LI    R+    +A++++ EM   GC  +  TY+ L+K   ++G   
Sbjct: 505 LEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATE 564

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           K + + + M       +    ++LI+  C  GK+ +A      M+ RG  PD+V Y+S+I
Sbjct: 565 KCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLI 624

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           +GLC  G  +EAL LFN    L+ K   PD  TYN L++  C +   + +  LL   +  
Sbjct: 625 NGLCKMGRFQEALNLFNG---LQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSN 681

Query: 574 GCDPDLVTCNIFL 586
           G  P+ +T +I +
Sbjct: 682 GFIPNEITWSILI 694



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 192/375 (51%), Gaps = 4/375 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEF-YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +N+++N  +  G +  A +  Y ++V A      P+  TFN++I  +C+ G + +A++  
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIA---GFEPDAFTFNIMIDGLCKKGYLVSALEFL 395

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  +  EP++ TY  L+DG CK+   +EA  +++ M   G     V +N LI  LCK+
Sbjct: 396 DEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKD 455

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G++  A ++   M  KGC P+  T+N+LI+GLC    +++A+ L   M+    + N VTY
Sbjct: 456 GKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTY 515

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+I+  ++L       +++  M  R   ++   Y+ LI  L K G  E  + L +QM  
Sbjct: 516 NTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFG 575

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +   P+    + LI+  CR GK ++A + L +MI  G   +  TY+SL+ G  + G+  +
Sbjct: 576 EEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQE 635

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ ++  +       + V Y+ LI   C +G   +A  +  + +S G  P+ + +S +I+
Sbjct: 636 ALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695

Query: 516 GLCNAGSVEEALKLF 530
                 S  E   + 
Sbjct: 696 YFVKNNSDSEQFTIL 710



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 137/308 (44%), Gaps = 39/308 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  +   G F+    V+  M  +   +    +  +  A  K   +++A++++  M
Sbjct: 409 TYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEM 468

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +  CK  + +FNS++  + +      AL  Y  ++      ++ NT+T+N +I    R
Sbjct: 469 SSK-GCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLE---GVIANTVTYNTLIHAFLR 524

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN----------------------- 241
           L L+  A +L  EM  R C  D  TY  L+  LCK                         
Sbjct: 525 LELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINS 584

Query: 242 ------------RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
                       ++++A+  L +M   G  P  VT+N LINGLCK G    A  L + + 
Sbjct: 585 CNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQ 644

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            KG  P+ VTYNTLI   C +G  + A  LL + V++  +PNE+T+  +IN  VK     
Sbjct: 645 AKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDS 704

Query: 350 DGARVLMS 357
           +   +LM 
Sbjct: 705 EQFTILMG 712


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  282 bits (722), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 159/534 (29%), Positives = 282/534 (52%), Gaps = 24/534 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V +A R+F T+        TV ++N+++N   + G    A    +       M   P+T 
Sbjct: 114 VADAERVFATL----GASATVVTYNTMVNGYCRAGRIEDARRLISG------MPFPPDTF 163

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN +I+ +C  G V +A+ +F +M  R C P + TY  L+D  CK +   +A++LLDEM
Sbjct: 164 TFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEM 223

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  GC P  VT+NVLIN +C  G++  A  ++ ++   GC P+ VTY  ++  LC     
Sbjct: 224 RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERW 283

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +   L   M ++KC P+EVT+ TI+  L + G      +V+  M E     +   YS++
Sbjct: 284 KEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSI 343

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL   G+ +DA++L  ++   GCKP+T+ Y+ ++ GLC + + + AEE++ EM+ + C
Sbjct: 344 LDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDC 403

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  T+++++    + G   +A+++ + M++N C  + V Y+ +I GLC +  + +A  
Sbjct: 404 PPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAME 463

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           + + + S GCKPD+V +++++ GLC+    E+A +L   M  +     PD  T+N ++ +
Sbjct: 464 LLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNM--MHSDCPPDATTFNTVITS 521

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK---------LEAPQDGTDFL- 603
           LC++  +  +I+ L  M + GC P+  T NI + AL +          L    +GT  L 
Sbjct: 522 LCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLI 581

Query: 604 --NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             N +   + K  +      ++ VM+   LSP T T+  +   +CR      AI
Sbjct: 582 TYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAI 635



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 156/573 (27%), Positives = 269/573 (46%), Gaps = 77/573 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +++  Y  +G  +    ++  M            I      G+   V +A+ +F  M
Sbjct: 132 TYNTMVNGYCRAGRIEDARRLISGMPFPPDTFTFNPLIRALCVRGR---VPDALAVFDDM 188

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C  +V +++ +L+   +   Y +A+   + +   +     P+ +T+N++I  +C 
Sbjct: 189 LHR-GCSPSVVTYSILLDATCKASGYRQAMVLLDEM---RAKGCEPDIVTYNVLINAMCN 244

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD A+ +  ++P   C+PD  TY  ++  LC   R  E   L  EM  + C P  VT
Sbjct: 245 EGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVT 304

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR-- 322
           FN ++  LC+ G + RA K+VD+M   GC+P+ VTY++++ GLC  G +D AV LL R  
Sbjct: 305 FNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLK 364

Query: 323 ---------------------------------MVASKCMPNEVTYGTIINGLVKLGRAV 349
                                            MV S C P+EVT+ T+I  L + G   
Sbjct: 365 SYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVD 424

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
              +V+  M E   + +   Y+++I GL  E   +DAM+L   +   GCKP+ V ++ L+
Sbjct: 425 RAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLL 484

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC V + ++AE+++  M+++ C  +A T+++++    + G   +A+E  K MA+N C+
Sbjct: 485 KGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCI 544

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N+  Y++++  L + GK +EA  + + M +    PD++ Y+++I  +  AG +EEAL L
Sbjct: 545 PNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDL 602

Query: 530 FNEMLC--LEPKS-------------------------------QPDVFTYNILLNALCK 556
              M+   L P +                                PD   YN +L   C+
Sbjct: 603 LRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQ 662

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                 +ID    M+  GC PD  T  I L AL
Sbjct: 663 NWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 250/491 (50%), Gaps = 10/491 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI    N GD      +L  +          ++  + K+   +   +E   LF  M
Sbjct: 234 TYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEM 293

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                C     +FN+++  + Q+GL  RA++  +H+  ++H   +P+ +T++ ++  +C 
Sbjct: 294 ASN-KCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHM--SEH-GCIPDIVTYSSILDGLCD 349

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G VD+A++L   +    C+PD   Y T++ GLC   + + A  L+ EM    C P  VT
Sbjct: 350 VGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVT 409

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN +I  LC+ G + RA K+V+ M   GC P+ VTYN++I GLC +  +D A+ LL  + 
Sbjct: 410 FNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQ 469

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  C P+ VT+ T++ GL  + R  D  +++++M       +   ++T+I+ L ++G   
Sbjct: 470 SYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLL 529

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A++  K M E GC PN   Y+ ++D L + GK  EA ++L  M N     +  TY++++
Sbjct: 530 QAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVI 587

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC-EDGKLREARMVWTQMLSRGC 503
               ++GK  +A+++ + M  N    + + Y  L +G+C EDG  R  RM+  ++   G 
Sbjct: 588 SNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRML-CRLQDMGL 646

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PD   Y+ ++ G C     + A+  F  M  +     PD  TY ILL AL  +  +  +
Sbjct: 647 SPDATFYNDILLGFCQNWRTDIAIDCFAHM--VSSGCMPDESTYIILLEALAYECLLDEA 704

Query: 564 IDLLNSMMDRG 574
             LL ++   G
Sbjct: 705 KQLLVNLCSLG 715



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 201/424 (47%), Gaps = 34/424 (8%)

Query: 237 LCKENRLDEAVLLLDEMQVDG----CFPTPVT-FNVLINGLCKNGELGRAAKLVDNMFLK 291
           L +   +D+A+ L+D +   G    C P PV   N+LI  LC  G +  A ++   +   
Sbjct: 68  LIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL--- 124

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G     VTYNT+++G C  G ++ A  L+  M      P+  T+  +I  L   GR  D 
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGMPFP---PDTFTFNPLIRALCVRGRVPDA 181

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             V   M  R    +   YS L+    K      AM L  +M  KGC+P+ V Y+ LI+ 
Sbjct: 182 LAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINA 241

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           +C  G  DEA  IL ++ ++GC  +A TY+ ++K    S +  +  E++ +MA N C  +
Sbjct: 242 MCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPD 301

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
           EV ++ ++  LC+ G +  A  V   M   GC PD+V YSS++ GLC+ G V++A++L +
Sbjct: 302 EVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLS 361

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            +     K  PD   Y  +L  LC      H+ +L+  M+   C PD VT N  + +L +
Sbjct: 362 RLKSYGCK--PDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           K                 L  R       K+VE M +   +P   T+  ++  LC  + I
Sbjct: 420 K----------------GLVDR-----AIKVVEQMSENGCNPDIVTYNSIIDGLCNERCI 458

Query: 652 QAAI 655
             A+
Sbjct: 459 DDAM 462



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 99/245 (40%), Gaps = 41/245 (16%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +L++   +   ++  E ++  M          +F  +  +  +  L+ +AI     M
Sbjct: 479 TFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIM 538

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E  C     ++N V++ +++ G    AL+  + + N       P+ +T+N VI  + +
Sbjct: 539 A-ENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT-----PDLITYNTVISNITK 592

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ---------- 254
            G ++ A+ L R M      PD  TY +L  G+C+E+  D A+ +L  +Q          
Sbjct: 593 AGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATF 652

Query: 255 -----------------VD--------GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
                            +D        GC P   T+ +L+  L     L  A +L+ N+ 
Sbjct: 653 YNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLC 712

Query: 290 LKGCL 294
             G L
Sbjct: 713 SLGVL 717


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  281 bits (720), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 153/441 (34%), Positives = 251/441 (56%), Gaps = 12/441 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN  +N + + G   RAL+ YN ++    + ++P+ +TFN++I   C+ G  + A  LF
Sbjct: 534 AFNCCINGLSKLGDVSRALQVYNRML---ELELVPDKVTFNILIAGACKAGNFEQASALF 590

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  +N +PD+ T+  L+DGLCK  +++ A  +LD M   G  P  VT+N L++GLCK+
Sbjct: 591 EEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKS 650

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G +  A + ++ M   GC+P+ +TY +L++ LC     D A+ L+  + +    P+ VTY
Sbjct: 651 GRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTY 710

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM-- 393
             +++GL K G+      VL  M  +  H +   Y+TLI  L K G  E+A +L   M  
Sbjct: 711 NILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS 770

Query: 394 -MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA--NAFTYSSLMKGFFES 450
            + + C PN V YS LI+GLC+VG+ DEA E++ EM+   C    N  TY+S + G  + 
Sbjct: 771 RVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQ 830

Query: 451 GKGHKAVEIWKDMAKNN--CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
               +A E+ + +   +     + V +S LI GLC+ G+  EA  V+  M++ G  P+VV
Sbjct: 831 SMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVV 890

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +++GLC    +E A  +   M  ++    PDV TY++L++A CK S++  +++LL+
Sbjct: 891 TYNVLMNGLCKTDKMERAHAMIESM--VDKGVTPDVITYSVLVDAFCKASHVDEALELLH 948

Query: 569 SMMDRGCDPDLVTCNIFLTAL 589
            M  RGC P++VT N  +  L
Sbjct: 949 GMASRGCTPNVVTFNSIIDGL 969



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 184/608 (30%), Positives = 304/608 (50%), Gaps = 36/608 (5%)

Query: 66   SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
            ++ + ++ P   +Y      F   I   +  GD      V  RM   + V  + +F  + 
Sbjct: 520  AEALLDAMPDPDTY-----AFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILI 574

Query: 126  KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
                KA   E+A  LF  MV + + +  V +F ++++ + + G    A +  + + N   
Sbjct: 575  AGACKAGNFEQASALFEEMVAK-NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN--- 630

Query: 186  MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
            + + PN +T+N ++  +C+ G ++ A Q   EM    C PD  TY +L+  LC+ +R D+
Sbjct: 631  LGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDD 690

Query: 246  AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
            A+ L+ E++  G  P  VT+N+L++GL K+G+  +A  +++ M  KG  P+ VTYNTLI 
Sbjct: 691  ALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLID 750

Query: 306  GLCLKGNLDKAVSLLDRM---VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
             LC  G+L++A  L   M   V+  C+PN VTY  +INGL K+GR +D AR L+    RK
Sbjct: 751  SLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGR-IDEARELIQEMMRK 809

Query: 363  ---FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK--PNTVVYSALIDGLCRVGK 417
                  N   Y++ + GL K+    +A +L + + +   +  P+TV +S LIDGLC+ G+
Sbjct: 810  SCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQ 869

Query: 418  PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             DEA  +  +MI  G   N  TY+ LM G  ++ K  +A  + + M       + + YSV
Sbjct: 870  TDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSV 929

Query: 478  LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
            L+   C+   + EA  +   M SRGC P+VV ++S+I GLC +    EA ++F++M  L+
Sbjct: 930  LVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMT-LK 988

Query: 538  PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE------ 591
                PD  TY  L++ L +      +  LL++M     DPD    N  +  L +      
Sbjct: 989  HGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSKLGDVSR 1044

Query: 592  ------KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
                  +LE   D   F N L     K         + E M+ K L P   T+  ++  L
Sbjct: 1045 ALHRMLELELVPDKVTF-NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGL 1103

Query: 646  CRPKRIQA 653
            C+  +++A
Sbjct: 1104 CKAGQVEA 1111



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 160/528 (30%), Positives = 271/528 (51%), Gaps = 32/528 (6%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +EEA RL H  +    C   V +++ ++N + + G    A E    +   K  ++L
Sbjct: 263 KAGDLEEARRL-HGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR-KSCDVL 320

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREM--PVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           PN +T+N  +  +C+  +   A +L R +        PD  T+ TL+DGLCK  ++DEA 
Sbjct: 321 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEAC 380

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            + D+M   G  P  +T+N L+NGLCK  ++ RA  ++++M  KG  P+ +TY+ L+   
Sbjct: 381 SVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAF 440

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C    +D+A+ LL  M +  C PN VT+ +II+GL K  R+ +  ++   M  +   V +
Sbjct: 441 CKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPD 500

Query: 368 YI-YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            I Y TLI GLF+ G+A  A  L   M +    P+T  ++  I+GL ++G    A ++  
Sbjct: 501 KITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYN 556

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            M+      +  T++ L+ G  ++G   +A  ++++M   N   + + +  LI GLC+ G
Sbjct: 557 RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAG 616

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           ++  AR +   M + G  P+VV Y++++HGLC +G +EEA +   EM  +     PD  T
Sbjct: 617 QVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEM--VSSGCVPDSIT 674

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           Y  L+ ALC+ S    ++ L++ +   G DPD VT NI +           DG       
Sbjct: 675 YGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILV-----------DG------- 716

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              L+K  +T     ++E M+ K   P   T+  ++  LC+   ++ A
Sbjct: 717 ---LWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEA 761



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/586 (27%), Positives = 288/586 (49%), Gaps = 68/586 (11%)

Query: 120  SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
            ++  +  A+ KA  V+EA+ L H M     C   V +FNS+++ + +      A + ++ 
Sbjct: 432  TYSVLVDAFCKASRVDEALELLHGMASR-GCTPNVVTFNSIIDGLCKSDRSGEAFQMFDD 490

Query: 180  IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
            +   KH  ++P+ +T+  +I  + R G    A  L   MP    +PD Y +   ++GL K
Sbjct: 491  MA-LKH-GLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP----DPDTYAFNCCINGLSK 544

Query: 240  ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-------- 291
               +  A+ + + M      P  VTFN+LI G CK G   +A+ L + M  K        
Sbjct: 545  LGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 604

Query: 292  ---------------------------GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
                                       G  PN VTYN L+HGLC  G +++A   L+ MV
Sbjct: 605  FGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMV 664

Query: 325  ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +S C+P+ +TYG+++  L +  R  D  +++  ++   +  +   Y+ L+ GL+K G+ E
Sbjct: 665  SSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTE 724

Query: 385  DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM---INNGCAANAFTYS 441
             A+ + ++M+ KG  P+ V Y+ LID LC+ G  +EA  +  +M   ++  C  N  TYS
Sbjct: 725  QAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYS 784

Query: 442  SLMKGFFESGKGHKAVEIWKDMAKNNC--VYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
             L+ G  + G+  +A E+ ++M + +C  + N + Y+  + GLC+   + EA  +   + 
Sbjct: 785  VLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLR 844

Query: 500  SRGCK--PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
                +  PD V +S++I GLC  G  +EA  +F++M  +     P+V TYN+L+N LCK 
Sbjct: 845  DGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDM--IAGGYVPNVVTYNVLMNGLCKT 902

Query: 558  SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR-------- 609
              +  +  ++ SM+D+G  PD++T ++ + A   K     +  + L+ +A R        
Sbjct: 903  DKMERAHAMIESMVDKGVTPDVITYSVLVDAFC-KASHVDEALELLHGMASRGCTPNVVT 961

Query: 610  -------LFKRQRTSGGFKIVEVM-LQKFLSPQTSTWERVVQELCR 647
                   L K  ++   F++ + M L+  L+P   T+  ++  L R
Sbjct: 962  FNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFR 1007



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/555 (29%), Positives = 273/555 (49%), Gaps = 57/555 (10%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL-VD 209
           K T+ SFN  LN++++ G   +A++ +   +  +     PN  T++ +++   + G  V+
Sbjct: 108 KHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPR---CRPNHFTYSTLLRATYKAGGDVE 164

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVL 268
             +  FR +   +    +  Y  ++  LC+      A+ +   EM  DG  PT VT+N +
Sbjct: 165 RTLGFFRRIRSSSRS--VADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTI 222

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           INGLCK+ ELG   +L + +  +G  P+ VTYNTLI  LC  G+L++A  L   M +  C
Sbjct: 223 INGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSC 282

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK---FHVNEYIYSTLISGLFKEGKAED 385
           +PN VTY  +INGL K+GR +D AR L+    RK      N   Y++ + GL K+    +
Sbjct: 283 VPNVVTYSVLINGLCKVGR-IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAE 341

Query: 386 AMKLWKQMMEKGCK--PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           A +L + + +   +  P+TV +S LIDGLC+ G+ DEA  +  +MI  G   N  TY++L
Sbjct: 342 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNAL 401

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  ++ K  +A  + + M       + + YSVL+   C+  ++ EA  +   M SRGC
Sbjct: 402 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 461

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------------------ 533
            P+VV ++S+I GLC +    EA ++F++M                              
Sbjct: 462 TPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAE 521

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL------- 586
             L+    PD + +N  +N L K  ++S ++ + N M++    PD VT NI +       
Sbjct: 522 ALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAG 581

Query: 587 -----TALKEKLEAPQDGTDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
                +AL E++ A     D +    L   L K  +      I+++M    + P   T+ 
Sbjct: 582 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYN 641

Query: 640 RVVQELCRPKRIQAA 654
            +V  LC+  RI+ A
Sbjct: 642 ALVHGLCKSGRIEEA 656



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 256/554 (46%), Gaps = 77/554 (13%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            TF  LI     +G+F+    +   M  +       +F  +     KA  VE A R    +
Sbjct: 569  TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA-RDILDL 627

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +        V ++N++++ + + G    A +F   +V++     +P+++T+  ++  +CR
Sbjct: 628  MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSS---GCVPDSITYGSLVYALCR 684

Query: 205  LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
                D+A+QL  E+     +PD  TY  L+DGL K  + ++A+ +L+EM   G  P  VT
Sbjct: 685  ASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVT 744

Query: 265  FNVLINGLCKNGELGRAAKLVDNM---FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            +N LI+ LCK G+L  A +L  +M     + C+PN VTY+ LI+GLC  G +D+A  L+ 
Sbjct: 745  YNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQ 804

Query: 322  RMVASKC---------------------------------------MPNEVTYGTIINGL 342
             M+   C                                        P+ VT+ T+I+GL
Sbjct: 805  EMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 864

Query: 343  VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
             K G+  +   V   M    +  N   Y+ L++GL K  K E A  + + M++KG  P+ 
Sbjct: 865  CKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDV 924

Query: 403  VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
            + YS L+D  C+    DEA E+L  M + GC  N  T++S++ G  +S +  +A +++ D
Sbjct: 925  ITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDD 984

Query: 463  MA-KNNCVYNEVCYSVLIHGLCEDG----------------------------KLREARM 493
            M  K+    +++ Y  LI GL   G                            KL +   
Sbjct: 985  MTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSR 1044

Query: 494  VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
               +ML     PD V ++ +I G C AG+ E+A  LF EM+      QPDV T+  L++ 
Sbjct: 1045 ALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV--AKNLQPDVMTFGALIDG 1102

Query: 554  LCKQSNISHSIDLL 567
            LCK   +  + D++
Sbjct: 1103 LCKAGQVEATWDIM 1116



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 168/366 (45%), Gaps = 21/366 (5%)

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEV-TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           L GN +      D   A     + + ++   +N LVK G       +  S    +   N 
Sbjct: 87  LDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNH 146

Query: 368 YIYSTLISGLFKEG-KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL- 425
           + YSTL+   +K G   E  +  ++++       +   Y+ ++  LCR G+   A EI  
Sbjct: 147 FTYSTLLRATYKAGGDVERTLGFFRRIRSS--SRSVADYNIVLQSLCRAGETARALEIFR 204

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM  +G A    TY++++ G  +S +    +E+++++ +     + V Y+ LI  LC+ 
Sbjct: 205 GEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKA 264

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L EAR +   M SR C P+VV YS +I+GLC  G ++EA +L  EM        P++ 
Sbjct: 265 GDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNII 324

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRG--CDPDLVTCNIFLTALKEKLEAPQDGTDF- 602
           TYN  L+ LCKQS  + + +L+ S+ D      PD VT +  +  L +  +  +  + F 
Sbjct: 325 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384

Query: 603 -------------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                         N L   L K  +      ++E M+ K ++P   T+  +V   C+  
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 444

Query: 650 RIQAAI 655
           R+  A+
Sbjct: 445 RVDEAL 450


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  281 bits (719), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 174/588 (29%), Positives = 296/588 (50%), Gaps = 30/588 (5%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
           +Y    S F+ L++  A +G F S+  +L +M   K  V E +F+   + Y  +H +   
Sbjct: 87  NYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAE 146

Query: 138 IR-LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           I  LF  M  +F  K   + +N  L+++++          ++ +V      + P+  TFN
Sbjct: 147 INPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADA---VPPDVSTFN 203

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           ++I+ +C+   +  AI +  +MP     PD  T+ TLM G  +E  ++ A+ + + M   
Sbjct: 204 ILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVES 263

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           GC  T V+ NVL+NGLCK G +  A + +     +G  P++VT+N L++GLC  G++ + 
Sbjct: 264 GCELTSVSVNVLVNGLCKEGRIEEALRFIYEE--EGFCPDQVTFNALVNGLCRTGHIKQG 321

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           + ++D M+      +  TY ++I+GL KLG   +   +L  M  R    N   Y+TLI  
Sbjct: 322 LEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGT 381

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L KE   E A +L + +  KG  P+   +++LI GLC     + A E+  EM   GC  +
Sbjct: 382 LCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPD 441

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            FTYS L++      +  +A+ + K+M  + C  N V Y+ LI GLC++ ++ +A  ++ 
Sbjct: 442 EFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFD 501

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           QM   G     V Y+++I+GLC +  VEEA +L ++M+      +PD FTY  +L   C+
Sbjct: 502 QMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIM--EGLKPDKFTYTTMLKYFCQ 559

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL------------------KEKLEAPQD 598
           Q +I  + D++ +M   GC+PD+VT    +  L                  K  +  PQ 
Sbjct: 560 QGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQA 619

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                N +   L KR+RT    ++   M++K   P   T++ V + LC
Sbjct: 620 ----YNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLC 663



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 161/497 (32%), Positives = 254/497 (51%), Gaps = 9/497 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           STF  LI+    +   +   ++L  M        EK+F  + + + +   VE A+R+   
Sbjct: 200 STFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKEL 259

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV E  C+ T  S N ++N + +EG    AL F       +     P+ +TFN ++  +C
Sbjct: 260 MV-ESGCELTSVSVNVLVNGLCKEGRIEEALRFI-----YEEEGFCPDQVTFNALVNGLC 313

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G +   +++   M  +  E D+YTY +L+ GLCK   +DEAV +L  M    C P  V
Sbjct: 314 RTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTV 373

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+N LI  LCK   +  A +L   +  KG LP+  T+N+LI GLCL  N + A+ L + M
Sbjct: 374 TYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEM 433

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
               C P+E TY  +I  L    R  +   +L  ME      N  +Y+TLI GL K  + 
Sbjct: 434 KEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRV 493

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            DA  ++ QM   G   ++V Y+ LI+GLC+  + +EA +++ +MI  G   + FTY+++
Sbjct: 494 GDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTM 553

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +K F + G   +A +I ++M  N C  + V Y  LI GLC+ G++  A  +   +  +G 
Sbjct: 554 LKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGM 613

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN-ISH 562
                AY+ +I  LC     +EA++LF EM  +E    PDV TY I+   LC     I  
Sbjct: 614 VLTPQAYNPVIQALCKRKRTKEAMRLFREM--MEKGDPPDVITYKIVFRGLCNGGGPIQE 671

Query: 563 SIDLLNSMMDRGCDPDL 579
           ++D    M+++G  P+ 
Sbjct: 672 AVDFTVEMLEKGILPEF 688



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 210/454 (46%), Gaps = 97/454 (21%)

Query: 85  TFYSLIQHYANSGDFKS-LEMVLYRMRREKRVVLEKSFIFIFKAYG-------KAHLVEE 136
           TF +L+     +G  K  LEM+ +        +LEK F      Y        K   ++E
Sbjct: 304 TFNALVNGLCRTGHIKQGLEMMDF--------MLEKGFELDVYTYNSLISGLCKLGEIDE 355

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+ + H MV    C+    ++N+++  + +E     A E    ++ +K   +LP+  TFN
Sbjct: 356 AVEILHHMVSR-DCEPNTVTYNTLIGTLCKENHVEAATEL-ARVLTSK--GVLPDVCTFN 411

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I+ +C     + A++LF EM  + C+PD +TY  L++ LC E RL EA++LL EM++ 
Sbjct: 412 SLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELS 471

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           GC    V +N LI+GLCKN  +G A  + D M + G   + VTYNTLI+GLC    +++A
Sbjct: 472 GCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEA 531

Query: 317 VSLLDRMVA-----------------------------------SKCMPNEVTYGTIING 341
             L+D+M+                                    + C P+ VTYGT+I G
Sbjct: 532 AQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGG 591

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK----- 396
           L K GR    +++L S++ +   +    Y+ +I  L K  + ++AM+L+++MMEK     
Sbjct: 592 LCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPD 651

Query: 397 -------------------------------GCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
                                          G  P    +  L +GLC +      E+ L
Sbjct: 652 VITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLS----MEDTL 707

Query: 426 FEMINNGCAANAFTYS--SLMKGFFESGKGHKAV 457
            ++IN       F+ S  S+++GF +  K + A+
Sbjct: 708 IQLINMVMEKGRFSQSETSIIRGFLKIQKFNDAL 741



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/309 (19%), Positives = 134/309 (43%), Gaps = 27/309 (8%)

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN----TVVYSALIDGLCRVGKPDEAE 422
           ++  S L+  L ++  +  A+ L++       +PN      V+  L+  L R G  D   
Sbjct: 56  DFSPSQLLDLLRRQPDSSSALSLFQW---ASAQPNYSAHPSVFHELLRQLARAGSFDSML 112

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE-IWKDMAKNNCVYNEV-CYSVLIH 480
            +L +M ++    +  T+   ++ +  S   H  +  ++  M ++  V  +   Y+V + 
Sbjct: 113 TLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALS 172

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            L +  KL+    + ++M++    PDV  ++ +I  LC A  +  A+ +  +M    P  
Sbjct: 173 LLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDM----PNY 228

Query: 541 --QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL------KEK 592
             +PD  T+  L+    +++++  ++ +   M++ GC+   V+ N+ +  L      +E 
Sbjct: 229 GLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEA 288

Query: 593 LEAPQDGTDF------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
           L    +   F       N L   L +      G ++++ ML+K       T+  ++  LC
Sbjct: 289 LRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLC 348

Query: 647 RPKRIQAAI 655
           +   I  A+
Sbjct: 349 KLGEIDEAV 357


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  281 bits (719), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 172/589 (29%), Positives = 284/589 (48%), Gaps = 70/589 (11%)

Query: 70  FNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG 129
           F S     S++    T+ ++I+      D   ++ +L  M+ E     E  F+ +  AY 
Sbjct: 60  FKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYR 119

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +A L E+A++ F+  + EF CK +VK +N VL+ ++ E  +      YN   N K   I 
Sbjct: 120 RAGLAEQALKTFYR-IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYN---NMKRDGIE 175

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT----------------- 232
            N  T+N+++K +C+   VD A +L  EM  + C PD  +Y T                 
Sbjct: 176 LNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAREL 235

Query: 233 -------------LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                        L++G C+E++++E   L +EM V+G  P  +T++ +IN L + G + 
Sbjct: 236 SMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVE 295

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  ++  MFL+GC PN  T+ +L+ G  + G L +A+ L +RM+     PN V Y T+I
Sbjct: 296 MALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLI 355

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +GL   G+ V+   V   ME      NE  YSTLI G  K G    A ++W +M+  GC 
Sbjct: 356 HGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCL 415

Query: 400 PNTVVYSALIDGLCR-----------------------------------VGKPDEAEEI 424
           PN VVY+ ++D LCR                                    GK + A ++
Sbjct: 416 PNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKV 475

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L +M   GCA N  TY+ ++ G F + +  +A++I  ++ +     N V Y+ ++ G C 
Sbjct: 476 LNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCH 535

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G  + A  +  ++L  G KPD + Y+++I+  C  G V+ A++L +  L  + +  PDV
Sbjct: 536 AGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDR-LTKKGEGYPDV 594

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
           FTY  LL  +C    +  ++  L+ M++ G  P+  T N  +  L  KL
Sbjct: 595 FTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKL 643



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 153/581 (26%), Positives = 258/581 (44%), Gaps = 75/581 (12%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           VL +++ E  ++L   F   FK+   ++  +     + TM+     +R +     +L ++
Sbjct: 43  VLNKLKNEPNILLALHF---FKSIANSNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLM 99

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
             EG                   I  N   F +VI    R GL + A++ F  +    C+
Sbjct: 100 KLEG-------------------ISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCK 140

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P +  Y  ++D L  EN+      + + M+ DG      T+N+L+  LCKN  +  A KL
Sbjct: 141 PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKL 200

Query: 285 VDNMFLKGCLPNEVT------------------------------YNTLIHGLCLKGNLD 314
           +  M  KGC+P+ V+                              YN LI+G C +  ++
Sbjct: 201 LAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKME 260

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +   L + M      P+ +TY T+IN L ++G       VL  M  R    N + +++L+
Sbjct: 261 EVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLM 320

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G F  G+  +A+ LW +M+++G +PNTV Y+ LI GLC  GK  EA  +  +M  NG  
Sbjct: 321 KGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVF 380

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  TYS+L+ GF ++G    A EIW  M  N C+ N V Y+ ++  LC +     A  +
Sbjct: 381 PNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHL 440

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
              M +  C P+ + +++ I GLC +G  E A+K+ N+M   +    P+V TYN +L+ L
Sbjct: 441 IENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQM--RQYGCAPNVTTYNEVLDGL 498

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
                   ++ ++  + +     +LVT N  L+                      +FK  
Sbjct: 499 FNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHA----------------GMFK-- 540

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              G  +I   +L     P + T+  V+   C+   ++ AI
Sbjct: 541 ---GALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAI 578



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 5/193 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E A+++ + M  ++ C   V ++N VL+ +        AL+    I   + M I  N +T
Sbjct: 470 EWAMKVLNQM-RQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEI---EEMEIKSNLVT 525

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N ++   C  G+   A+Q+  ++ V   +PD  TY T++   CK+  +  A+ L+D + 
Sbjct: 526 YNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLT 585

Query: 255 VDG-CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             G  +P   T+  L+ G+C    +  A   +D M  +G  PN  T+N L+ GL  K   
Sbjct: 586 KKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGH 645

Query: 314 DKAVSLLDRMVAS 326
              + ++D ++A+
Sbjct: 646 LGPIHIVDNILAN 658


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  281 bits (719), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 184/597 (30%), Positives = 307/597 (51%), Gaps = 26/597 (4%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +F    K  +++   S F  ++     +G+F +++ +L  M+    V+   S +   ++Y
Sbjct: 75  LFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESY 134

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
               L  E ++    M  EF        +N +LNV++ +G   + +E  +   N     I
Sbjct: 135 ASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLV-DGNKLKLVEIAHS--NMVSRGI 191

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P+  TFN++IK +CR   +  AI L  EM      PD  T+ T+M G  +E  LD A+ 
Sbjct: 192 RPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMR 251

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGL 307
           + ++M   GC  T VT NVL+NG CK G +  A + ++ M L+ G  P++ T+N L++GL
Sbjct: 252 VKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGL 311

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
              G++  A+ ++D M+     P+  TY ++I+GL KLG   +  +VL  M ER    N 
Sbjct: 312 SKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNT 371

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+T+IS L KE + E+A KL   +  KG  P+   Y++LI GLC       A E+  E
Sbjct: 372 VTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKE 431

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M   GC  + FTY+ L+      GK  +A+ + K+M  + C  N + Y+ LI G C++ +
Sbjct: 432 MKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKR 491

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + EA  ++ QM  +G   + V Y+++I GLC +  VEEA +L ++M+      +PD FTY
Sbjct: 492 IAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIM--EGLRPDKFTY 549

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNE 605
           N LL   CK  +I  + D++ +M   GC+PD+VT    +  L    ++EA    T  L  
Sbjct: 550 NSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEA---ATKLLRT 606

Query: 606 LAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           + ++               LF+R+R+    ++   M++K  +P   T++ V + LC+
Sbjct: 607 IQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQ 663



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 161/497 (32%), Positives = 259/497 (52%), Gaps = 6/497 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           STF  LI+    +   +   +++  M     +  EK+F  I + + +   ++ A+R+   
Sbjct: 196 STFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQ 255

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV E  C  T  + N ++N   +EG    AL F   +  +      P+  TFN+++  + 
Sbjct: 256 MV-EAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEM--SLREGFFPDKYTFNMLVNGLS 312

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G V +A+++   M     +PDIYTY +L+ GLCK   +DEAV +L++M    C P  V
Sbjct: 313 KTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTV 372

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+N +I+ LCK  ++  A KL   +  KG LP+  TYN+LI GLCL  N   A+ L   M
Sbjct: 373 TYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEM 432

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
               C P+E TY  +I+ L   G+  +   +L  ME      N   Y+TLI G  K  + 
Sbjct: 433 KTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRI 492

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +A +++ QM  +G   N+V Y+ LIDGLC+  + +EA +++ +MI  G   + FTY+SL
Sbjct: 493 AEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSL 552

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +  F ++G   KA +I + MA + C  + V Y  LI GLC+ G++  A  +   +  +G 
Sbjct: 553 LTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGI 612

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN-ISH 562
                AY+ +I  L      +EA++LF EM  +E    PD  TY I+   LC+    I  
Sbjct: 613 NLTPHAYNPVIQALFRRKRSKEAVRLFREM--IEKAEAPDAVTYKIVFRGLCQGGGPIGE 670

Query: 563 SIDLLNSMMDRGCDPDL 579
           ++D +  M++RG  P+ 
Sbjct: 671 AVDFVMEMLERGYVPEF 687



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/485 (28%), Positives = 231/485 (47%), Gaps = 39/485 (8%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + TF +++Q +   G+      V  +M     VV   +   +   + K   +EEA+R   
Sbjct: 230 EKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIE 289

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M           +FN ++N + + G    ALE  + ++        P+  T+N +I  +
Sbjct: 290 EMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLRE---GFDPDIYTYNSLISGL 346

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+LG VD A+++  +M  R+C P+  TY T++  LCKEN+++EA  L   +   G  P  
Sbjct: 347 CKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDV 406

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+N LI GLC +     A +L   M  KGC P+E TYN LI  LC +G L +A++LL  
Sbjct: 407 CTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE 466

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M  S C  N +TY T+I+G  K  R  +   +   ME +    N   Y+TLI GL K  +
Sbjct: 467 MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            E+A +L  QM+ +G +P+   Y++L+   C+ G   +A +I+  M ++GC  +  TY +
Sbjct: 527 VEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGT 586

Query: 443 LMKGFFESGK-----------------------------------GHKAVEIWKDMAKNN 467
           L+ G  ++G+                                     +AV ++++M +  
Sbjct: 587 LIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKA 646

Query: 468 CVYNEVCYSVLIHGLCEDG-KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
              + V Y ++  GLC+ G  + EA     +ML RG  P+  ++  +  GL +   V   
Sbjct: 647 EAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTL 706

Query: 527 LKLFN 531
           +KL +
Sbjct: 707 IKLID 711



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 176/378 (46%), Gaps = 18/378 (4%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+   +  ++H L   G  D    +L  M  S  + +  +    I      G   +  + 
Sbjct: 87  PSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQF 146

Query: 355 LMSME-ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           + +ME E     N + Y+ L++ L    K +        M+ +G +P+   ++ LI  LC
Sbjct: 147 VDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALC 206

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           R  +   A  ++ EM + G   +  T++++M+GF E G    A+ + + M +  CV   V
Sbjct: 207 RAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNV 266

Query: 474 CYSVLIHGLCEDGKLREA-RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             +VL++G C++G++ EA R +    L  G  PD   ++ +++GL   G V+ AL++ + 
Sbjct: 267 TVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDM 326

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KE 591
           ML       PD++TYN L++ LCK   +  ++ +LN M++R C P+ VT N  ++ L KE
Sbjct: 327 ML--REGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKE 384

Query: 592 -------KLEAPQDGTDFL------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
                  KL     G   L      N L   L   +  +   ++ + M  K   P   T+
Sbjct: 385 NQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTY 444

Query: 639 ERVVQELCRPKRIQAAIN 656
             ++  LC   ++Q A+N
Sbjct: 445 NMLIDSLCFRGKLQEALN 462



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 95/204 (46%), Gaps = 10/204 (4%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +++A  +  TM  +  C+  + ++ +++  + + G    A +    I   K +N+ 
Sbjct: 558 KAGDIKKAADIVQTMASD-GCEPDIVTYGTLIAGLCKAGRVEAATKLLRTI-QMKGINLT 615

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN-RLDEAVL 248
           P+   +N VI+ + R      A++LFREM  +   PD  TY  +  GLC+    + EAV 
Sbjct: 616 PHA--YNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVD 673

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP-NEVTYNTLIHGL 307
            + EM   G  P   +F +L  GL     +G   KL+D +  K     NEV   T+I G 
Sbjct: 674 FVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEV---TMIRGF 730

Query: 308 CLKGNLDKAVSLLDRMVASKCMPN 331
                   A++ L  ++ S+  PN
Sbjct: 731 LKISKYQDALATLGGILDSR-KPN 753


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  281 bits (718), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 148/436 (33%), Positives = 236/436 (54%), Gaps = 34/436 (7%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           + P+  T+N++I  +C+    D A ++  EM  R   PD  T+ ++MDGLCK  + + A 
Sbjct: 6   VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LL  M    C P+  T+N LI+GLCK   + RA  LVD     G +P+ VTY+ L  GL
Sbjct: 66  SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C +G +D+A  L+  M  + C PN VTY T+I+GL K  +      +L ++    F  + 
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ ++ GL KEG+ + A+K+ + M+++GC P+ + Y+AL++GLCR G+ DEA  I  E
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVE----------------------------- 458
           M++  C A+A  Y SL+ G+ +S +  +A +                             
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDE 305

Query: 459 ---IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
              +++DMA   CV N   Y++++ GLC+ GK+ EA      M S GC PDVV+Y+ +I 
Sbjct: 306 IPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIID 365

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GL  A   +EA ++ ++M  ++    PD  TYN L+   CK+     ++ +L +M+  G 
Sbjct: 366 GLFKASKPKEARQVLDQM--IQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 423

Query: 576 DPDLVTCNIFLTALKE 591
           DPD VT N  ++ L +
Sbjct: 424 DPDNVTYNTLISGLSQ 439



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 145/439 (33%), Positives = 240/439 (54%), Gaps = 26/439 (5%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M  R   PD++TY  L+DGLCK ++ D+A  +L EM   G  P  VTFN +++GLCK G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
             RA  L+  M  + C P+  TYNTLI GLC + N+D+A +L+D  V+S  +P+ VTY  
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           + +GL K GR  +   ++  M       N   Y+TLI GL K  K E A +L + ++  G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P+ V Y+ ++DGLC+ G+ D+A +++  M+  GC  +  TY++LM+G   +G+  +A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            I+K+M   +C  + + Y  L++G C+  + +EA+ V   +  RG  P +  Y++++ G 
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGY 297

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C  G ++E   +F +M C      P++ TYNI+++ LCK   +  +   L SM   GC P
Sbjct: 298 CKEGRLDEIPNVFEDMAC--RGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP 355

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           D+V+ NI +           DG          LFK  +     ++++ M+Q  + P   T
Sbjct: 356 DVVSYNIII-----------DG----------LFKASKPKEARQVLDQMIQAGIPPDAVT 394

Query: 638 WERVVQELCRPKRIQAAIN 656
           +  ++ + C+ +R   A+ 
Sbjct: 395 YNTLMAQFCKEERFDDAVG 413



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 265/535 (49%), Gaps = 29/535 (5%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +     KA   ++A  + H MVD      TV +FNS+++ + + G + RA   ++ 
Sbjct: 12  TYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTV-TFNSIMDGLCKAGKFERA---HSL 67

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +      N  P+  T+N +I  +C+   VD A  L  E       PD+ TY  L DGLCK
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R+DEA  L+ EM  +GC P  VT+N LI+GLCK  +  +A +L++ +   G +P+ VT
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y  ++ GLC +G LDKA+ +++ M+   C P+ +TY  ++ GL + GR  +   +   M 
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    +   Y +L++G  K  + ++A K+   +  +G  P   VY+AL+DG C+ G+ D
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGYCKEGRLD 304

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           E   +  +M   GC  N  TY+ +M G  + GK  +A    + M    CV + V Y+++I
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIII 364

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GL +  K +EAR V  QM+  G  PD V Y++++   C     ++A+ +   M  ++  
Sbjct: 365 DGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM--IKAG 422

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             PD  TYN L++ L + + +  + +L++ M+  GC   +  C  +              
Sbjct: 423 VDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC--VVSACTTY-------------- 466

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               N +  RL K         +++ M    +   T T+   +  LC+  R+  A
Sbjct: 467 ----NTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 517



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 153/585 (26%), Positives = 289/585 (49%), Gaps = 61/585 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  I     KA   E A  L   M  E +C+ +  ++N++++ + ++    RA    + 
Sbjct: 47  TFNSIMDGLCKAGKFERAHSLLAVMA-ERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDE 105

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
            V++     +P+ +T++++   +C+ G +D A +L +EM    C P++ TY TL+DGLCK
Sbjct: 106 FVSS---GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCK 162

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            ++ ++A  LL+ +   G  P  VT+ ++++GLCK G L +A K+V+ M  +GC P+ +T
Sbjct: 163 ASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVIT 222

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y  L+ GLC  G +D+A  +   MV+  C  + + Y +++NG  K  R  +  +V+  + 
Sbjct: 223 YTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIR 282

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
              +     +Y+ L+ G  KEG+ ++   +++ M  +GC PN   Y+ ++DGLC+ GK D
Sbjct: 283 GTPYI---DVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVD 339

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA   L  M + GC  +  +Y+ ++ G F++ K  +A ++   M +     + V Y+ L+
Sbjct: 340 EAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLM 399

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CL 536
              C++ +  +A  +   M+  G  PD V Y+++I GL     + +A +L +EML   C+
Sbjct: 400 AQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCV 459

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL---------- 586
                    TYN +++ LCK+  +  ++ L++ M   G + + VT NIF+          
Sbjct: 460 VSACT----TYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLD 515

Query: 587 --TALKEKLEAPQDGTDF-----------------------------------LNELAIR 609
             ++L  +++  +D   +                                    N L   
Sbjct: 516 EASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 575

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             K +R      ++E+M+Q+  SP   T+  V+  LC+  ++  A
Sbjct: 576 FTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKA 620



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 263/483 (54%), Gaps = 17/483 (3%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA   E+A  L  T+V        V ++  +++ + +EG   +AL+    ++        
Sbjct: 162 KASKTEKAYELLETLVSSGFVPDVV-TYTIIVDGLCKEGRLDKALKMVEGMLKR---GCT 217

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+  +++ +CR G VD A  +F+EM  ++C  D   Y +L++G CK +R  EA   
Sbjct: 218 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEA--- 274

Query: 250 LDEMQVDGCFPTPV--TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
             +  VDG   TP    +N L++G CK G L     + ++M  +GC+PN  TYN ++ GL
Sbjct: 275 --QKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGL 332

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G +D+A   L+ M ++ C+P+ V+Y  II+GL K  +  +  +VL  M +     + 
Sbjct: 333 CKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDA 392

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+TL++   KE + +DA+ + K M++ G  P+ V Y+ LI GL +  +  +A E++ E
Sbjct: 393 VTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHE 452

Query: 428 MINNGCAANA-FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           M+ NGC  +A  TY++++    + G   +A+ +   M  +    N V Y++ I  LC++G
Sbjct: 453 MLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEG 512

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           +L EA  + ++M +     D V+Y+++I GLC A  ++ A KL  EM+ ++        T
Sbjct: 513 RLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITS-HT 568

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           +N+L++A  K   +  ++ LL  M+ RGC P ++T N+ +T L  KL+      +  +E+
Sbjct: 569 FNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLC-KLDKVDKAWELFDEM 627

Query: 607 AIR 609
           A+R
Sbjct: 628 AVR 630



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 223/450 (49%), Gaps = 12/450 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SL+  Y  S   K  + V+  +R    + +   +  +   Y K   ++E   +F  M 
Sbjct: 258 YVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDV---YNALMDGYCKEGRLDEIPNVFEDMA 314

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
               C   +K++N V++ + + G    A  F   + +A     +P+ +++N++I  + + 
Sbjct: 315 CR-GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSA---GCVPDVVSYNIIIDGLFKA 370

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
                A Q+  +M      PD  TY TLM   CKE R D+AV +L  M   G  P  VT+
Sbjct: 371 SKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 430

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNE-VTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           N LI+GL +   LG A +L+  M   GC+ +   TYNT+I  LC +G L +A+ L+D M 
Sbjct: 431 NTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMT 490

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 N VTY   I+ L K GR  + + +L  M+  +   +E  Y+T+I GL K  + +
Sbjct: 491 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTVIIGLCKAEQLD 547

Query: 385 DAMKLWKQMME-KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            A KL ++M+  KG    +  ++ LID   +  + DEA  +L  M+  GC+ +  TY+ +
Sbjct: 548 RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMV 607

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +    +  K  KA E++ +MA    V + V Y+VLI+GLC  G+ +EA  V  +M S  C
Sbjct: 608 ITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 667

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           + D +    +   L   G  EEA +L   M
Sbjct: 668 EIDDLKCRKLYLALRGQGRGEEAAELLRRM 697



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 223/446 (50%), Gaps = 21/446 (4%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK 119
           K  Q   D I   TP +  Y        +L+  Y   G    +  V   M     V   K
Sbjct: 272 KEAQKVVDGI-RGTPYIDVYN-------ALMDGYCKEGRLDEIPNVFEDMACRGCVPNIK 323

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +     K   V+EA     +M     C   V S+N +++ + +      A +  + 
Sbjct: 324 TYNIVMDGLCKHGKVDEAFPFLESM-HSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQ 382

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++ A    I P+ +T+N ++   C+    D+A+ + + M     +PD  TY TL+ GL +
Sbjct: 383 MIQA---GIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQ 439

Query: 240 ENRLDEAVLLLDEMQVDGCFPTP-VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
            NRL +A  L+ EM  +GC  +   T+N +I+ LCK G L +A  L+D+M   G   N V
Sbjct: 440 TNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTV 499

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK---LGRAVDGARVL 355
           TYN  I  LC +G LD+A SLL  M     + +EV+Y T+I GL K   L RA   AR +
Sbjct: 500 TYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREM 556

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
           +++  +   +  + ++ LI    K  + ++A+ L + M+++GC P+ + Y+ +I  LC++
Sbjct: 557 VAV--KGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKL 614

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            K D+A E+  EM   G  A++ +Y+ L+ G    G+G +A+++ ++MA ++C  +++  
Sbjct: 615 DKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKC 674

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSR 501
             L   L   G+  EA  +  +M ++
Sbjct: 675 RKLYLALRGQGRGEEAAELLRRMTTK 700


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 167/529 (31%), Positives = 278/529 (52%), Gaps = 14/529 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V  A  +F+ M+ +  C+R   S+ ++++ + + G   R  E  N     +  +  P   
Sbjct: 20  VNSAFSVFN-MMPKKGCRRNEVSYTNLIHGLCEVG---RVDEGINIFKKMREDDCYPTVR 75

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+ +++  +   G    AI LF EM  R CEP+I+TY  +++ +CKE +L+E   +LDEM
Sbjct: 76  TYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEM 135

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P+  T+N LI+G CK G +  A +++D M    C PNE TYN LI G C K N+
Sbjct: 136 VEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNV 195

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A++LL +M+ S+  P+ VTY ++I+G  K+G      R+L  M E     +++ YS  
Sbjct: 196 HRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVF 255

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I  L K+G+ E+A  L+  + EKG K N V+Y+ALIDG C+ GK D+A  +L  M+   C
Sbjct: 256 IDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDC 315

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N+ TY++L+ G  +  K  +A+ + + M +         Y++LI  + ++G    A  
Sbjct: 316 LPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHR 375

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  QM+S G +PDV  Y++ IH  C  G+++EA  + + M   E    PD  TY ++++A
Sbjct: 376 ILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMM--FERGVMPDALTYTLVIDA 433

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA-LKEKLEAPQDGTDFLNELAIRLF- 611
                 ++ + D+L  M D GCDP   T +  +   LKE+L          + +    F 
Sbjct: 434 YGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFA 493

Query: 612 ------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                 K  +     ++ E ML+   SP  +T+ +++  LC+  R+  A
Sbjct: 494 DVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVA 542



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 237/503 (47%), Gaps = 37/503 (7%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  A  K   +EE  R+   MV++     +V ++N++++   +EG+   A E    
Sbjct: 111 TYTVMINAMCKETKLEEGRRILDEMVEKGLVP-SVPTYNALIDGYCKEGMVEAAQE---- 165

Query: 180 IVNAKHMNIL-PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
           I++  H N   PN  T+N +I   CR   V  A+ L  +M      P + TY +L+ G C
Sbjct: 166 ILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQC 225

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K   LD A  LL+ M  +G  P   T++V I+ LCK G +  A  L +++  KG   NEV
Sbjct: 226 KIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEV 285

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y  LI G C  G +D A SLLDRM+   C+PN  TY  +I+GL K  +  +   ++ SM
Sbjct: 286 IYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESM 345

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            ++        Y+ LI  + KEG  + A ++  QM+  G +P+  +Y+A I   C  G  
Sbjct: 346 IQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNI 405

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EAE+++  M   G   +A TY+ ++  +   G  + A ++ K M    C  +   YS L
Sbjct: 406 KEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCL 465

Query: 479 IH--------------GLCED---------------GKLREARMVWTQMLSRGCKPDVVA 509
           I                LC+                 K   A  ++ +ML  GC P++  
Sbjct: 466 IKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINT 525

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ +I GLC  G +  A KLF+ M   E    P    YN LLN  C+      ++ L+ +
Sbjct: 526 YAKLIIGLCKVGRLGVAQKLFDHMN--ERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGA 583

Query: 570 MMDRGCDPDLVTCNIFLTALKEK 592
           MM+ G  P L + N+    L E+
Sbjct: 584 MMEHGHLPLLESLNVLFCGLYEE 606



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 167/331 (50%), Gaps = 11/331 (3%)

Query: 268 LINGLCK---------NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
           ++NG CK         N ++  A  + + M  KGC  NEV+Y  LIHGLC  G +D+ ++
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +  +M    C P   TY  I++ L + GR ++   +   M ER    N + Y+ +I+ + 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           KE K E+  ++  +M+EKG  P+   Y+ALIDG C+ G  + A+EIL  M +N C  N  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TY+ L+ GF      H+A+ +   M ++    + V Y+ LIHG C+ G L  A  +   M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
              G  PD   YS  I  LC  G +EEA  LFN +   E   + +   Y  L++  CK  
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL--KEKGIKANEVIYTALIDGYCKAG 298

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +  +  LL+ M+   C P+  T N  +  L
Sbjct: 299 KMDDANSLLDRMLTEDCLPNSSTYNALIDGL 329



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 181/362 (50%), Gaps = 32/362 (8%)

Query: 303 LIHGLCLKGNL---------DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           +++G C  GNL         + A S+ + M    C  NEV+Y  +I+GL ++GR  +G  
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   M E   +     Y+ ++  LF+ G+  +A+ L+ +M E+GC+PN   Y+ +I+ +C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           +  K +E   IL EM+  G   +  TY++L+ G+ + G    A EI   M  N+C  NE 
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y+ LI G C    +  A  + ++ML     P VV Y+S+IHG C  G ++ A +L N M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
              E    PD +TY++ ++ LCK+  I  +  L NS+ ++G   +     +  TAL    
Sbjct: 241 N--ENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKAN----EVIYTAL---- 290

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
               DG            K  +      +++ ML +   P +ST+  ++  LC+ +++Q 
Sbjct: 291 ---IDG----------YCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQE 337

Query: 654 AI 655
           A+
Sbjct: 338 AL 339



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 180/369 (48%), Gaps = 17/369 (4%)

Query: 233 LMDGLCKENRLDEAVL---------LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
           +++G CK   L EA L         + + M   GC    V++  LI+GLC+ G +     
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           +   M    C P   TY  ++H L   G   +A++L   M    C PN  TY  +IN + 
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K  +  +G R+L  M E+    +   Y+ LI G  KEG  E A ++   M    C PN  
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y+ LI G CR      A  +L +M+ +    +  TY+SL+ G  + G    A  +   M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            +N  V ++  YSV I  LC+ G++ EA +++  +  +G K + V Y+++I G C AG +
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 524 EEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           ++A  L + ML   CL     P+  TYN L++ LCK+  +  ++ L+ SM+ +G    + 
Sbjct: 301 DDANSLLDRMLTEDCL-----PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVP 355

Query: 581 TCNIFLTAL 589
           T  I + A+
Sbjct: 356 TYTILIVAM 364



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 130/516 (25%), Positives = 224/516 (43%), Gaps = 70/516 (13%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y K  +VE A  +   M     C    +++N ++    ++   HRA+   + ++ +
Sbjct: 150 LIDGYCKEGMVEAAQEILDLMHSN-SCNPNERTYNELICGFCRKKNVHRAMALLSKMLES 208

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   + P+ +T+N +I   C++G +D+A +L   M      PD +TY   +D LCK+ R+
Sbjct: 209 R---LTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRI 265

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA +L + ++  G     V +  LI+G CK G++  A  L+D M  + CLPN  TYN L
Sbjct: 266 EEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNAL 325

Query: 304 IHGLCLK-----------------------------------GNLDKAVSLLDRMVASKC 328
           I GLC +                                   G+ D A  +LD+MV+S  
Sbjct: 326 IDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGY 385

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+   Y   I+     G   +   ++  M ER    +   Y+ +I      G    A  
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445

Query: 389 LWKQMMEKGCKPNTVVYSALID--------------GLC---------------RVGKPD 419
           + K+M + GC P+   YS LI                LC               ++ K +
Sbjct: 446 VLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFE 505

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A E+  +M+ +GC+ N  TY+ L+ G  + G+   A +++  M +     +E  Y+ L+
Sbjct: 506 TALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +  CE G   +A  +   M+  G  P + + + +  GL   GS E+A  +F+ +  L+  
Sbjct: 566 NCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNL--LQCG 623

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
              D   + IL++ L K        +LL  M  RGC
Sbjct: 624 YNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGC 659



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 142/616 (23%), Positives = 251/616 (40%), Gaps = 125/616 (20%)

Query: 8   HTKILLTITNSAMKMKTLSLTTIPSERS-----HRFFSVRSAVSSNKQMETEPQGNAKSE 62
           +T I+  +  S  +M+ ++L +   ER      H +  + +A+    ++E   +G    +
Sbjct: 77  YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLE---EGRRILD 133

Query: 63  QPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI 122
           +     +  S P          T+ +LI  Y   G  ++ + +L  M        E+++ 
Sbjct: 134 EMVEKGLVPSVP----------TYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYN 183

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            +   + +   V  A+ L   M+ E     +V ++NS+++   + G    A    N ++N
Sbjct: 184 ELICGFCRKKNVHRAMALLSKML-ESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLN-LMN 241

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
                ++P+  T+++ I T+C+ G ++ A  LF  +  +  + +   Y  L+DG CK  +
Sbjct: 242 EN--GVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN--------------------------- 275
           +D+A  LLD M  + C P   T+N LI+GLCK                            
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 276 --------GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
                   G+   A +++D M   G  P+   Y   IH  C +GN+ +A  ++  M    
Sbjct: 360 LIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERG 419

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG------ 381
            MP+ +TY  +I+    LG       VL  M +     + + YS LI  L KE       
Sbjct: 420 VMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYK 479

Query: 382 -----------------------KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
                                  K E A++L+++M+E GC PN   Y+ LI GLC+VG+ 
Sbjct: 480 NVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRL 539

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMK--------------------------------- 445
             A+++   M   G + +   Y+SL+                                  
Sbjct: 540 GVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVL 599

Query: 446 --GFFESGKGHKAVEIWKDMAKNNCVYN--EVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
             G +E G   KA  ++ ++ +  C YN  EV + +LI GL ++G       +   M +R
Sbjct: 600 FCGLYEEGSKEKAKVVFSNLLQ--CGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEAR 657

Query: 502 GCKPDVVAYSSMIHGL 517
           GC+     Y  +I GL
Sbjct: 658 GCQIHPQTYRMLIEGL 673


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 176/580 (30%), Positives = 298/580 (51%), Gaps = 18/580 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF +++  Y   G+   +E  LY  +  +  +   +F +  +   + +   V+ A  +F 
Sbjct: 196 TFNAMVNGYCKIGNV--VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFL 253

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M  +  C+R   S+ ++++ + + G  + AL+ +  +      N  P   T+ ++I  +
Sbjct: 254 IMPQK-GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED---NCCPTVRTYTVLIYAL 309

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
              G    A+ LF EM  + CEP+++TY  L+DGLCKEN++DEA  +L EM   G  P+ 
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N LI+G CK G +  A +++D M    C PN  TYN LI GLC K  + KA++LL++
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+  K  P+ +TY ++I+G  K+       R+L  M E     +++ YS  I  L KEG+
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            E+A  L+  +  KG K N V+Y+ALIDG C+VGK D A  +L  M+N+ C  N++TY+ 
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L++G  +  K  +A  +   M         V Y++LI  + +DG    A  V+  M+S G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            +PDV  Y++ +H   + G +EE   +  +M   E    PD+ TY +L++   +      
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM--NEEGILPDLVTYTVLIDGYARLGLTHR 667

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL-------KEKLEAPQDGTDFLNELAIR-LFKRQ 614
           + D L  M+D GC P L   +I +  L       + + E   D    +N + I  ++K  
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTL 727

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                 K+ E M++   +   S +  ++   C+ +R++ A
Sbjct: 728 EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEA 767



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 239/510 (46%), Gaps = 63/510 (12%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA--------------------L 174
           + A+  F+ +      K  V S++S+LN++I+  L   A                    L
Sbjct: 82  QTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVL 141

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E +  +         P    +N ++ ++ +  L+D    ++ E+      P+IYT+  ++
Sbjct: 142 EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMV 201

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +G CK   + EA L   ++   G  P   T+  LI G C+N  +  A ++   M  KGC 
Sbjct: 202 NGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQ 261

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
            NEV+Y  LIHGLC  G +++A+ L   M    C P   TY  +I  L   GR V+   +
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL 321

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M+E+    N + Y+ LI GL KE K ++A K+  +M EKG  P+ V Y+ALIDG C+
Sbjct: 322 FNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA---------- 464
            G  D+A EIL  M +N C  N  TY+ L+ G  +  K HKA+ +   M           
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441

Query: 465 -------------------------KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
                                    +N  V ++  YSV I  LC++G++ EA  ++  + 
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCK 556
           ++G K + V Y+++I G C  G ++ A  L   ML   CL     P+ +TYN+L+  LCK
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL-----PNSYTYNVLIEGLCK 556

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +  +  +  L+  M+  G  P +VT  I +
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILI 586



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 152/547 (27%), Positives = 256/547 (46%), Gaps = 44/547 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMV-LYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFH 142
           T+  LI  YA SG  + +E + L+   +EK       ++  +     K + ++EA ++  
Sbjct: 301 TYTVLI--YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLS 358

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M  E     +V ++N++++   +EG+   A E  + +   +  +  PNT T+N +I  +
Sbjct: 359 EM-SEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLM---ESNSCGPNTRTYNELICGL 414

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+   V  A+ L  +M  R   P + TY +L+ G CK N L+ A  LL  M  +G  P  
Sbjct: 415 CKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQ 474

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T++V I+ LCK G +  A  L D++  KG   NEV Y  LI G C  G +D A SLL+R
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+   C+PN  TY  +I GL K  +  + + ++  M           Y+ LI  + K+G 
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A+K++  M+  G +P+   Y+A +      G  +E ++++ +M   G   +  TY+ 
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM--------- 493
           L+ G+   G  H+A +  K M    C  +    S+LI  L  + +++E R          
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 494 --------VWT------------QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
                   VW             +M+  GC  DV  Y ++I G C    +EEA  L + M
Sbjct: 715 VNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 774

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP-----DLVTCNIFLTA 588
              E    P    YN LL+  CK    + ++ L+++M++ G  P      L+ C +++  
Sbjct: 775 K--ERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG 832

Query: 589 LKEKLEA 595
             EK +A
Sbjct: 833 SNEKAKA 839



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 209/444 (47%), Gaps = 33/444 (7%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K + +E A RL  ++++E        +++  ++ + +EG    A   ++ +   K   + 
Sbjct: 451 KVNDLESAYRLL-SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV---KAKGVK 506

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            N + +  +I   C++G +D A  L   M    C P+ YTY  L++GLCKE ++ EA  L
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           + +M   G  PT VT+ +LI  + K+G    A K+ ++M   G  P+  TY   +H    
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFS 626

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G L++   ++ +M     +P+ VTY  +I+G  +LG        L  M +     + YI
Sbjct: 627 QGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYI 686

Query: 370 YSTLISGLFKEGKAED-----------------------------AMKLWKQMMEKGCKP 400
            S LI  L  E + ++                             A+KL+++M+E GC  
Sbjct: 687 VSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTI 746

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           +  +Y ALI G C+  + +EA+ ++  M   G + +   Y+SL+    + G   +AV + 
Sbjct: 747 DVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 806

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
             M +N  +     Y +L+ GL  +G   +A+ V+  +LS G   D VA+  +I GL   
Sbjct: 807 DAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKR 866

Query: 521 GSVEEALKLFNEMLCLEPKSQPDV 544
             V+E  +L + M   +  +Q D+
Sbjct: 867 DLVDECSELIDIMEEKDATAQADI 890



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 23/296 (7%)

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E KF      Y+T++  L K    ++   ++ +++     PN   ++A+++G C++G   
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EAE    +++  G   + FTY+SL+ G   +     A E++  M +  C  NEV Y+ LI
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           HGLCE G++ EA  ++  M    C P V  Y+ +I+ L  +G   EAL LFNEM   E  
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK--EKG 329

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            +P+V TY +L++ LCK++ +  +  +L+ M ++G  P +VT N  +           DG
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI-----------DG 378

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                       K       F+I+++M      P T T+  ++  LC+ +++  A+
Sbjct: 379 ----------YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 141/294 (47%), Gaps = 11/294 (3%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           ++FN    LG YQ    T+ + +  Y + G  + ++ V+ +M  E  +    ++  +   
Sbjct: 600 KVFNHMVSLG-YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDG 658

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y +  L   A      MVD   CK ++   + ++  +  E   +R  E  + I      N
Sbjct: 659 YARLGLTHRAFDFLKCMVDT-GCKPSLYIVSILIKNLSHE---NRMKETRSEIGIDSVSN 714

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           +  N++    V KT+      + A++LF +M    C  D+  Y  L+ G C++ RL+EA 
Sbjct: 715 V--NSVDIADVWKTL----EYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQ 768

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+  M+  G  P+   +N L++  CK G    A +LVD M   G LP   +Y  L+ GL
Sbjct: 769 GLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 828

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            ++G+ +KA ++   +++     +EV +  +I+GL+K     + + ++  MEE+
Sbjct: 829 YIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEK 882


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  280 bits (715), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 171/588 (29%), Positives = 296/588 (50%), Gaps = 28/588 (4%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFK 126
           E+FNS  K   ++   ST+ S+I+     G F+++E VL  MR      +LE  ++   K
Sbjct: 25  EMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMK 84

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
            YG+   V+EA+ +F  M D + C+ TV S+N++++V++  G + +A + Y   +  +  
Sbjct: 85  NYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY---MRMRDR 140

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I P+  +F + +K+ C+      A++L   M  + CE ++  YCT++ G  +EN   E 
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L  +M   G      TFN L+  LCK G++    KL+D +  +G LPN  TYN  I G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC +G LD AV ++  ++     P+ +TY  +I GL K  +  +    L  M       +
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            Y Y+TLI+G  K G  + A ++    +  G  P+   Y +LIDGLC  G+ + A  +  
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E +  G   N   Y++L+KG    G   +A ++  +M++   +     +++L++GLC+ G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            + +A  +   M+S+G  PD+  ++ +IHG      +E AL++ + M  L+    PDV+T
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM--LDNGVDPDVYT 498

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN LLN LCK S     ++   +M+++GC P+L T NI L +                  
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLES------------------ 540

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              L + ++      ++E M  K ++P   T+  ++   C+   +  A
Sbjct: 541 ---LCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 164/619 (26%), Positives = 282/619 (45%), Gaps = 62/619 (10%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           + ++  P + SY        +++    +SG F     V  RMR         SF    K+
Sbjct: 103 DFYDCEPTVFSYN-------AIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKS 155

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK--- 184
           + K      A+RL + M  +  C+  V ++ +V+    +E       E +  ++ +    
Sbjct: 156 FCKTSRPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214

Query: 185 -----------------------------HMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
                                           +LPN  T+NL I+ +C+ G +D A+++ 
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             +  +  +PD+ TY  L+ GLCK ++  EA + L +M  +G  P   T+N LI G CK 
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G +  A ++V +    G +P++ TY +LI GLC +G  ++A++L +  +     PN + Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+I GL   G  ++ A++   M E+        ++ L++GL K G   DA  L K M+ 
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KG  P+   ++ LI G     K + A EIL  M++NG   + +TY+SL+ G  ++ K   
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
            +E +K M +  C  N   +++L+  LC   KL EA  +  +M ++   PD V + ++I 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G C  G ++ A  LF +M     K      TYNI+++A  ++ N++ +  L   M+DR  
Sbjct: 575 GFCKNGDLDGAYTLFRKME-EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            PD  T  + +           DG            K    + G+K +  M++    P  
Sbjct: 634 GPDGYTYRLMV-----------DG----------FCKTGNVNLGYKFLLEMMENGFIPSL 672

Query: 636 STWERVVQELCRPKRIQAA 654
           +T  RV+  LC   R+  A
Sbjct: 673 TTLGRVINCLCVEDRVYEA 691



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 220/498 (44%), Gaps = 79/498 (15%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLF 141
           STF  L++     GD K  E +L ++   KR VL   F +    +   +   ++ A+R+ 
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVI--KRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             ++++   K  V ++N+++  + +   +  A  +   +VN     + P++ T+N +I  
Sbjct: 275 GCLIEQ-GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE---GLEPDSYTYNTLIAG 330

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD----------------- 244
            C+ G+V  A ++  +       PD +TY +L+DGLC E   +                 
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390

Query: 245 ------------------EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
                             EA  L +EM   G  P   TFN+L+NGLCK G +  A  LV 
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M  KG  P+  T+N LIHG   +  ++ A+ +LD M+ +   P+  TY +++NGL K  
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           +  D      +M E+    N + ++ L+  L +  K ++A+ L ++M  K   P+ V + 
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570

Query: 407 ALIDGLCRVGKPDEA------------------------------------EEILFEMIN 430
            LIDG C+ G  D A                                    E++  EM++
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
                + +TY  ++ GF ++G  +   +   +M +N  + +      +I+ LC + ++ E
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYE 690

Query: 491 ARMVWTQMLSRGCKPDVV 508
           A  +  +M+ +G  P+ V
Sbjct: 691 AAGIIHRMVQKGLVPEAV 708



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 168/365 (46%), Gaps = 14/365 (3%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +LI+  +N G       +   M  +  +   ++F  +     K   V +A  L   M+
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            + +    + +FN +++    +     ALE  + +++     + P+  T+N ++  +C+ 
Sbjct: 454 SKGYFP-DIFTFNILIHGYSTQLKMENALEILDVMLDN---GVDPDVYTYNSLLNGLCKT 509

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
              ++ ++ ++ M  + C P+++T+  L++ LC+  +LDEA+ LL+EM+     P  VTF
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV-TYNTLIHGLCLKGNLDKAVSLLDRMV 324
             LI+G CKNG+L  A  L   M     + +   TYN +IH    K N+  A  L   MV
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+  TY  +++G  K G    G + L+ M E  F  +      +I+ L  E +  
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE--ILFEMINNGCAANAFTYSS 442
           +A  +  +M++KG  P  V      + +C V K + A    +L +++   C    + Y  
Sbjct: 690 EAAGIIHRMVQKGLVPEAV------NTICDVDKKEVAAPKLVLEDLLKKSCIT-YYAYEL 742

Query: 443 LMKGF 447
           L  G 
Sbjct: 743 LFDGL 747


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 153/467 (32%), Positives = 254/467 (54%), Gaps = 23/467 (4%)

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            PN  TF ++I  +CR G +  A +L +EMP      ++  +  ++ GLC   +LD A+ L
Sbjct: 875  PNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALEL 934

Query: 250  LDEMQVDG-CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
              EM+  G C P   T++ +++ L K+G++  A +LV++M  KGC PN VTY++L+HGLC
Sbjct: 935  FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLC 994

Query: 309  LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
              G LD+A +LL RM  S C PN VTY TII+G  KLGR  +   +L  M +     N  
Sbjct: 995  KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVV 1054

Query: 369  IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
             Y+ L+    K GKAEDA+ L + M+EKG  PN   Y++L+D  C+  + + A ++L  M
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 429  INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            I  GC  N  +Y++++ G  ++ K H+ V + + M  NNCV + V ++ +I  +C+  ++
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 489  REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
              A  ++  +   GC P++V Y+S++HGLC +   ++A  L  EM   +    PD+ TYN
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT-RKQGCSPDIITYN 1233

Query: 549  ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
             +++ LCK   +  +  L   M+  G  PD VT +I +++L +          F++E   
Sbjct: 1234 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK--------WRFMDE--- 1282

Query: 609  RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                         ++E+ML+    P   T+  ++   C+   +  A+
Sbjct: 1283 ----------ANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKAL 1319



 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 153/466 (32%), Positives = 251/466 (53%), Gaps = 25/466 (5%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+++T+N +I  + +   +D+AI+L  EM      P++++Y T++ G CK NR++ A+ L
Sbjct: 228 PDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWL 287

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L++M   GC P  V++  +INGLCK  ++  A +++D M  +GC PN +TY TL+ G C 
Sbjct: 288 LEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCR 347

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+LD AV L+ +M      PN +TY  I++   +        +VL  M +     +   
Sbjct: 348 VGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAIN 407

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YST+ISG  K GK  +A  L +QM+ +GC+P+    S LID LC+    D A+E+L   I
Sbjct: 408 YSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD-MAKNNCVYNEVCYSVLIHGLCEDGKL 488
              CA +   YS L+    ++ +  +A E W D M KN C  + V Y+ ++ GLC+  ++
Sbjct: 468 GMDCAPDVVAYSILIHALCKAKRLPEA-ESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRI 526

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A +++ +M + G  PDVV YS +IH  C   +++ A K+   M   E K  PDV TY+
Sbjct: 527 NDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMK--EAKCVPDVVTYS 584

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            L+N LCK   +  + D+   M+  GC P+LVT N  +           DG         
Sbjct: 585 ALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLI-----------DG--------- 624

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            L K  +     +++E+M ++  +P + T+  ++  LC   R++ A
Sbjct: 625 -LCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEA 669



 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 163/542 (30%), Positives = 282/542 (52%), Gaps = 59/542 (10%)

Query: 150  CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
            C   + +F  +++ + + G    A E    +   +H  +  N +  N+VIK +C    +D
Sbjct: 873  CSPNMFTFTILIHGLCRAGDIGTAYELLKEM--PRH-GVPQNVILHNVVIKGLCSARKLD 929

Query: 210  NAIQLFREMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
            +A++LF+EM    +C PD++TY T++D L K  ++D+A  L+++M   GC P  VT++ L
Sbjct: 930  SALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSL 989

Query: 269  INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
            ++GLCK G+L  A  L+  M   GC PN VTYNT+I G C  G +D+A  LL+ MV   C
Sbjct: 990  LHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGC 1049

Query: 329  MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             PN VTY  +++   K G+A D   ++  M E+ +  N + Y++L+    K+ + E A +
Sbjct: 1050 QPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQ 1109

Query: 389  LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
            L   M++KGC PN V Y+ +I GLC+  K  E   +L +M++N C  +  T+++++    
Sbjct: 1110 LLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMC 1169

Query: 449  ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDV 507
            ++ +   A E++  + ++ C  N V Y+ L+HGLC+  +  +A  +  +M  + GC PD+
Sbjct: 1170 KTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDI 1229

Query: 508  VAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKS------------------------- 540
            + Y+++I GLC +  V+ A KLF +ML   L P                           
Sbjct: 1230 ITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLEL 1289

Query: 541  ------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
                   P   TY  L++  CK  N+  ++++L  ++ +G  PD+VT +IF+        
Sbjct: 1290 MLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFI-------- 1341

Query: 595  APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  D+L+       KR R     +++E ML+  L P T T+  +++  C     + A
Sbjct: 1342 ------DWLS-------KRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDA 1388

Query: 655  IN 656
            ++
Sbjct: 1389 VD 1390



 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 260/509 (51%), Gaps = 8/509 (1%)

Query: 82  GDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           GD+  YS LI  +  +G       +   M R+           I +    A    +A+  
Sbjct: 159 GDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLH 218

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M     C     ++N+++N + +      A+     +V+       PN  ++N V+ 
Sbjct: 219 FREMSKT--CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDN---GFAPNVFSYNTVLH 273

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C+   V+NA+ L  +M  R C PD+ +Y T+++GLCK +++DEA  ++D+M   GC P
Sbjct: 274 GFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQP 333

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             +T+  L++G C+ G+L  A +LV  M  +G  PN +TYN ++H  C + ++++A  +L
Sbjct: 334 NVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVL 393

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             M+ + C P+ + Y TII+G  K G+  +   +L  M  R    +    STLI  L K 
Sbjct: 394 QMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKA 453

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
              + A +L +  +   C P+ V YS LI  LC+  +  EAE  L  M+ N C  +  TY
Sbjct: 454 AAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTY 513

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +S++ G  +S + + A  ++  M     + + V YS++IH  C+D  L  A  +  +M  
Sbjct: 514 NSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKE 573

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
             C PDVV YS++I+GLC AG+V++A  +F EML       P++ TYN L++ LCK + +
Sbjct: 574 AKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGC--GCAPNLVTYNTLIDGLCKINKV 631

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             + ++L  M  + C PD +T    +  L
Sbjct: 632 EQAAEMLEIMRKQSCTPDSITYTCLINGL 660



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 168/575 (29%), Positives = 276/575 (48%), Gaps = 52/575 (9%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
            TF  LI     +GD  +   +L  M R    + V+L      + K    A  ++ A+ LF
Sbjct: 879  TFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHN---VVIKGLCSARKLDSALELF 935

Query: 142  HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
              M +   C   V +++++++ +++ G    A      +V+       PN +T++ ++  
Sbjct: 936  KEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSK---GCSPNVVTYSSLLHG 992

Query: 202  VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            +C+ G +D A  L + M    C P+I TY T++DG CK  R+DEA  LL+EM   GC P 
Sbjct: 993  LCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPN 1052

Query: 262  PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             VT+ VL++  CK G+   A  LV+ M  KG +PN  TYN+L+   C K  +++A  LL 
Sbjct: 1053 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 1112

Query: 322  RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             M+   C+PN V+Y T+I GL K  +  +G  +L  M       +   ++T+I  + K  
Sbjct: 1113 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 1172

Query: 382  KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI-NNGCAANAFTY 440
            + + A +L+  + E GC PN V Y++L+ GLC+  + D+AE +L EM    GC+ +  TY
Sbjct: 1173 RVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232

Query: 441  SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
            ++++ G  +S +  +A +++  M  +    ++V YS++I  LC+   + EA  V   ML 
Sbjct: 1233 NTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292

Query: 501  RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC------------------------- 535
             G  P  + Y ++I G C  G++++AL++   +L                          
Sbjct: 1293 NGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQ 1352

Query: 536  --------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
                    L     PD  TYN LL   C  S    ++DL   M   GC+PD    N   T
Sbjct: 1353 AGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPD----NATYT 1408

Query: 588  ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
             L   L   +   D L E++     +     GFK+
Sbjct: 1409 TLVGHLVDKKSYKDLLAEVS-----KSMVDTGFKL 1438



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 166/571 (29%), Positives = 268/571 (46%), Gaps = 43/571 (7%)

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
           +RR  R V   S I + +   +    E+A+R+    +DE+  + + +    VL  +I  G
Sbjct: 51  LRRVDRWVGSDSPISVLERIVQGASDEQALRV---ALDEYRGQLSPEIVGKVLQRLIDPG 107

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
                 E+       +H     N L  N+++K          A  LFR         D  
Sbjct: 108 AALVFFEWAETRDGYQHEIFCCNCL-LNVLVKA----HQYSQAHDLFRSRIEGQWGGDTV 162

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY TL+ G  +  ++  A  L DEM   G          ++ GLC  G+   A      M
Sbjct: 163 TYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM 222

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             K C P+ VTYNT+I+GL     LD A+ LL+ MV +   PN  +Y T+++G  K  R 
Sbjct: 223 S-KTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRV 281

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +   +L  M  R    +   Y+T+I+GL K  + ++A ++  +M+++GC+PN + Y  L
Sbjct: 282 ENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTL 341

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           +DG CRVG  D A E++ +M   G   NA TY+++M  F       +A ++ + M +  C
Sbjct: 342 VDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGC 401

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + + YS +I G C+ GKLREA  +  QM+ RGC+PDV   S++I  LC A +++ A +
Sbjct: 402 PPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQE 461

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L    + ++    PDV  Y+IL++ALCK   +  +   L+ M+   C PD+VT N  +  
Sbjct: 462 LLRMSIGMD--CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDG 519

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSG-----------------------GFKIVEV 625
           L +           +N+ A  LF R R +G                        FK++E 
Sbjct: 520 LCKSRR--------IND-AFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLER 570

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           M +    P   T+  ++  LC+   +  A +
Sbjct: 571 MKEAKCVPDVVTYSALINGLCKAGTVDKAFD 601



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 226/451 (50%), Gaps = 6/451 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +   + KA+ VE A+ L   MV    C   V S+ +V+N + +      A    + 
Sbjct: 267 SYNTVLHGFCKANRVENALWLLEQMVTR-GCPPDVVSYTTVINGLCKLDQVDEACRVMDK 325

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++        PN +T+  ++   CR+G +D A++L R+M  R   P+  TY  +M   C+
Sbjct: 326 MI---QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCR 382

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            N ++ A  +L  M   GC P  + ++ +I+G CK G+L  A  L++ M  +GC P+   
Sbjct: 383 RNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVAC 442

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
            +TLI  LC    +D A  LL   +   C P+ V Y  +I+ L K  R  +    L  M 
Sbjct: 443 LSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMV 502

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           + + + +   Y++++ GL K  +  DA  L+ +M   G  P+ V YS +I   C+    D
Sbjct: 503 KNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLD 562

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A ++L  M    C  +  TYS+L+ G  ++G   KA +++++M    C  N V Y+ LI
Sbjct: 563 SAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLI 622

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GLC+  K+ +A  +   M  + C PD + Y+ +I+GLCNA  +EEA ++  EM   +  
Sbjct: 623 DGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK--DKG 680

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
             PD  TY  LL AL K +N+     LL  M
Sbjct: 681 CLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/524 (26%), Positives = 243/524 (46%), Gaps = 30/524 (5%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            T+ SL+  +    + +    +L  M ++  V    S+  +     KA  V E + L   M
Sbjct: 1090 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 1149

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +   +C   + +FN++++ + +      A E +N I   +     PN +T+N ++  +C+
Sbjct: 1150 LSN-NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI---QESGCTPNLVTYNSLVHGLCK 1205

Query: 205  LGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
                D A  L REM  +  C PDI TY T++DGLCK  R+D A  L  +M  DG  P  V
Sbjct: 1206 SRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDV 1265

Query: 264  TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            T++++I+ LCK   +  A  +++ M   G  P  +TY TLI G C  GNLDKA+ +L  +
Sbjct: 1266 TYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLL 1325

Query: 324  VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            ++    P+ VT+   I+ L K GR      +L +M       +   Y+TL+ G       
Sbjct: 1326 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLT 1385

Query: 384  EDAMKLWKQMMEKGCKPNTVVYSALIDGLC-RVGKPDEAEEILFEMINNGCAANAFTYSS 442
            EDA+ L++ M + GC+P+   Y+ L+  L  +    D   E+   M++ G   N    S 
Sbjct: 1386 EDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSK 1445

Query: 443  L----------------MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            L                +  F + G    A ++++ M + N V       V +    E+ 
Sbjct: 1446 LEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEE- 1504

Query: 487  KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
               +A  +W  M   G +PD V + S++   C+AG ++ A+  F   +  +   +P V  
Sbjct: 1505 ---QAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVS-ISRDYGLEPGVDH 1560

Query: 547  YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
            ++ +++ L +   ++ + DL   M+   C P   T N  L+A K
Sbjct: 1561 FSCVIDLLGRLGLVNEAEDL---MLGMPCKPSAATWNCLLSAYK 1601



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 61/281 (21%), Positives = 108/281 (38%), Gaps = 50/281 (17%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            TF   I   +  G  +    +L  M R   V    ++  + K +  A L E+A+ LF  M
Sbjct: 1336 TFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVM 1395

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRAL-EFYNHIVNA--KHMNILPNTLTFNLVIKT 201
              +  C+    ++ +++  ++ +  Y   L E    +V+   K  + L + L  ++ ++ 
Sbjct: 1396 -RQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEA 1454

Query: 202  VCRLG--LVD----------------------------------------NAIQLFREMP 219
              RLG  +VD                                         A  L+R M 
Sbjct: 1455 DVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMG 1514

Query: 220  VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD-GCFPTPVTFNVLINGLCKNGEL 278
            +   EPD  T+ +L+   C    LD AV     +  D G  P    F+ +I+ L   G L
Sbjct: 1515 LEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLL---GRL 1571

Query: 279  GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
            G   +  D M    C P+  T+N L+    + G+ ++A+ +
Sbjct: 1572 GLVNEAEDLMLGMPCKPSAATWNCLLSAYKICGDFERALRV 1612


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  279 bits (713), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 176/581 (30%), Positives = 300/581 (51%), Gaps = 31/581 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF +++  Y   G+   +E  LY  +  +  +   +F +  +   + +   V+ A  +F 
Sbjct: 196 TFNAMVNGYCKIGNV--VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFL 253

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M  +  C+R   S+ ++++ + + G  + AL+ +  +      N  P   T+ ++I  +
Sbjct: 254 IMPQK-GCQRNEVSYTNLIHGLCEAGRINEALKLFADMTED---NCCPTVRTYTVLIYAL 309

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
              G    A+ LF EM  + CEP+++TY  L+DGLCKEN++DEA  +L EM   G  P+ 
Sbjct: 310 SGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSV 369

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N LI+G CK G +  A +++D M    C PN  TYN LI GLC K  + KA++LL++
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+  K  P+ +TY ++I+G  K+       R+L  M E     +++ YS  I  L KEG+
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            E+A  L+  +  KG K N V+Y+ALIDG C+VGK D A  +L  M+N+ C  N++TY+ 
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L++G  +  K  +A  +   M         V Y++LI  + +DG    A  V+  M+S G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            +PDV  Y++ +H   + G +EE   +  +M   E    PD+ TY +L++   +      
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKM--NEEGILPDLVTYTVLIDGYARLGLTHR 667

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL----KEKLEAPQDGTDFLN-----ELAIRLFKR 613
           + D L  M+D GC P L   +I +  L    + K    + G D ++     E+A++LF++
Sbjct: 668 AFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEK 727

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                       M++   +   S +  ++   C+ +R++ A
Sbjct: 728 ------------MVEHGCTIDVSIYGALIAGFCQQERLEEA 756



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 149/510 (29%), Positives = 239/510 (46%), Gaps = 63/510 (12%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA--------------------L 174
           + A+  F+ +      K  V S++S+LN++I+  L   A                    L
Sbjct: 82  QTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVL 141

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E +  +         P    +N ++ ++ +  L+D    ++ E+      P+IYT+  ++
Sbjct: 142 EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMV 201

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +G CK   + EA L   ++   G  P   T+  LI G C+N  +  A ++   M  KGC 
Sbjct: 202 NGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQ 261

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
            NEV+Y  LIHGLC  G +++A+ L   M    C P   TY  +I  L   GR V+   +
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL 321

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M+E+    N + Y+ LI GL KE K ++A K+  +M EKG  P+ V Y+ALIDG C+
Sbjct: 322 FNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA---------- 464
            G  D+A EIL  M +N C  N  TY+ L+ G  +  K HKA+ +   M           
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441

Query: 465 -------------------------KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
                                    +N  V ++  YSV I  LC++G++ EA  ++  + 
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCK 556
           ++G K + V Y+++I G C  G ++ A  L   ML   CL     P+ +TYN+L+  LCK
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACL-----PNSYTYNVLIEGLCK 556

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +  +  +  L+  M+  G  P +VT  I +
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILI 586



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 277/589 (47%), Gaps = 40/589 (6%)

Query: 93  YANSGDFKSLEMV-LYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHC 150
           YA SG  + +E + L+   +EK       ++  +     K + ++EA ++   M  E   
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEM-SEKGL 365

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
             +V ++N++++   +EG+   A E  + +   +  +  PNT T+N +I  +C+   V  
Sbjct: 366 IPSVVTYNALIDGYCKEGMIDDAFEILDLM---ESNSCGPNTRTYNELICGLCKKRKVHK 422

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A+ L  +M  R   P + TY +L+ G CK N L+ A  LL  M  +G  P   T++V I+
Sbjct: 423 AMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFID 482

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            LCK G +  A  L D++  KG   NEV Y  LI G C  G +D A SLL+RM+   C+P
Sbjct: 483 TLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP 542

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N  TY  +I GL K  +  + + ++  M           Y+ LI  + K+G  + A+K++
Sbjct: 543 NSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF 602

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M+  G +P+   Y+A +      G  +E ++++ +M   G   +  TY+ L+ G+   
Sbjct: 603 NHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARL 662

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM----------------- 493
           G  H+A +  K M    C  +    S+LI  L  + +++E R                  
Sbjct: 663 GLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIAL 722

Query: 494 -VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++ +M+  GC  DV  Y ++I G C    +EEA  L + M   E    P    YN LL+
Sbjct: 723 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMK--ERGMSPSEDIYNSLLD 780

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDP-----DLVTCNIFLTALKEKLEAPQDGTDF----L 603
             CK    + ++ L+++M++ G  P      L+ C +++    EK +A   G        
Sbjct: 781 CCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNY 840

Query: 604 NELAIR-----LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           +E+A +     L KR       +++++M +K   P   T+  +++ L R
Sbjct: 841 DEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGLER 889



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 161/611 (26%), Positives = 276/611 (45%), Gaps = 71/611 (11%)

Query: 21  KMKTLSLTTIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQ 80
           +MKT+ L  + ++ S   ++  + V+   ++     GN    + ++ +I  +     ++ 
Sbjct: 177 EMKTVYLELLNNQISPNIYTFNAMVNGYCKI-----GNVVEAELYASKIVQAGLHPDTF- 230

Query: 81  LGDSTFYSLI-QHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
               T+ SLI  H  N G   + E+ L  M ++     E S+  +     +A  + EA++
Sbjct: 231 ----TYTSLILGHCRNKGVDNAYEVFLI-MPQKGCQRNEVSYTNLIHGLCEAGRINEALK 285

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           LF  M ++ +C  TV+++  ++  +   G    AL  +N +   K     PN  T+ ++I
Sbjct: 286 LFADMTED-NCCPTVRTYTVLIYALSGSGRKVEALNLFNEM---KEKGCEPNVHTYTVLI 341

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C+   +D A ++  EM  +   P + TY  L+DG CKE  +D+A  +LD M+ + C 
Sbjct: 342 DGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCG 401

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   T+N LI GLCK  ++ +A  L++ M  +   P+ +TYN+LIHG C   +L+ A  L
Sbjct: 402 PNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRL 461

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  M  +  +P++ TY   I+ L K GR  +   +  S++ +    NE IY+ LI G  K
Sbjct: 462 LSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCK 521

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            GK + A  L ++M+   C PN+  Y+ LI+GLC+  K  EA  ++ +M+  G      T
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ L+    + G    A++++  M       +   Y+  +H     G L E   V  +M 
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641

Query: 500 SRGCKPDVVAYSSMIHG------------------------------------------- 516
             G  PD+V Y+ +I G                                           
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701

Query: 517 ----------LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
                     + N    E ALKLF +M+  E     DV  Y  L+   C+Q  +  +  L
Sbjct: 702 ETRSEIGIDSVSNTLEYEIALKLFEKMV--EHGCTIDVSIYGALIAGFCQQERLEEAQGL 759

Query: 567 LNSMMDRGCDP 577
           ++ M +RG  P
Sbjct: 760 VHHMKERGMSP 770



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 23/296 (7%)

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E KF      Y+T++  L K    ++   ++ +++     PN   ++A+++G C++G   
Sbjct: 152 EFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVV 211

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EAE    +++  G   + FTY+SL+ G   +     A E++  M +  C  NEV Y+ LI
Sbjct: 212 EAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLI 271

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           HGLCE G++ EA  ++  M    C P V  Y+ +I+ L  +G   EAL LFNEM   E  
Sbjct: 272 HGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK--EKG 329

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            +P+V TY +L++ LCK++ +  +  +L+ M ++G  P +VT N  +           DG
Sbjct: 330 CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI-----------DG 378

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                       K       F+I+++M      P T T+  ++  LC+ +++  A+
Sbjct: 379 ----------YCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 146/310 (47%), Gaps = 22/310 (7%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           ++FN    LG YQ    T+ + +  Y + G  + ++ V+ +M  E  +    ++  +   
Sbjct: 600 KVFNHMVSLG-YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDG 658

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y +  L   A      MVD   CK ++     +++++I+               N  H N
Sbjct: 659 YARLGLTHRAFDFLKCMVDT-GCKPSL----YIVSILIK---------------NLSHEN 698

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
            +  T +  + I +V      + A++LF +M    C  D+  Y  L+ G C++ RL+EA 
Sbjct: 699 RMKETRS-EIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQ 757

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+  M+  G  P+   +N L++  CK G    A +LVD M   G LP   +Y  L+ GL
Sbjct: 758 GLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 817

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
            ++G+ +KA ++   +++     +EV +  +I+GL+K     + + ++  MEE+    N 
Sbjct: 818 YIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNP 877

Query: 368 YIYSTLISGL 377
             YS LI GL
Sbjct: 878 LTYSLLIEGL 887


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  278 bits (712), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 266/499 (53%), Gaps = 25/499 (5%)

Query: 177 YNHIVNAKH----MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           Y H+  A+     M + P+  T+  +I+ +C  G V +A+ L  +M  R C+P++ TY  
Sbjct: 124 YGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTV 183

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++ +C+ +  ++A+ +LDEM+  GC P  VT+NV+ING+C+ G +  A +L++ +   G
Sbjct: 184 LLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG 243

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ V+Y TL+ GLC     D    L   M+   CMPNEVT+  +I    + G      
Sbjct: 244 FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAI 303

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           +VL  M E     N  + + +I+ + K+G+ +DA KL   M   GC P+T+ Y+ ++ GL
Sbjct: 304 QVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGL 363

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           CR  + D+A+E+L EM+ N C  N  T+++ +    + G   +A+ + + M+++ C    
Sbjct: 364 CRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGV 423

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ L++G C  G +  A  ++  M    CKP+ + Y++++ GLCNA  ++ A +L  E
Sbjct: 424 VTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAE 480

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M  L     P+V T+N+L++  C++  +  +I+L+  MM+ GC P+L+T N  L  + + 
Sbjct: 481 M--LRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKD 538

Query: 593 LEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTST 637
             + +D  + L+ L  +               L K  R     ++  V+    + P+   
Sbjct: 539 CSS-EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVV 597

Query: 638 WERVVQELCRPKRIQAAIN 656
           + +++  LC+   I  AI+
Sbjct: 598 YNKILLGLCKRCEIDNAID 616



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 154/551 (27%), Positives = 262/551 (47%), Gaps = 49/551 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + +L+  Y   G   +   ++  M            I +    G+   V +A+ L   M
Sbjct: 113 AYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGR---VADALSLLDDM 169

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C+  V ++  +L  + +   + +A+   + +   +     PN +T+N++I  +CR
Sbjct: 170 LRR-GCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEM---RAKGCTPNIVTYNVIINGMCR 225

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD+A +L   +P    +PD  +Y TL+ GLC   R D+   L  EM    C P  VT
Sbjct: 226 EGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVT 285

Query: 265 F-----------------------------------NVLINGLCKNGELGRAAKLVDNMF 289
           F                                   N++IN +CK G +  A KL+++M 
Sbjct: 286 FDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMG 345

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC P+ ++Y T++ GLC     D A  LL+ MV + C PNEVT+ T I  L + G   
Sbjct: 346 SYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIE 405

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               ++  M E    V    Y+ L++G   +G  + A++L++ M    CKPNT+ Y+ L+
Sbjct: 406 QAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLL 462

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   + D A E++ EM+   C  N  T++ L+  F + G   +A+E+ + M ++ C 
Sbjct: 463 TGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCT 522

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N + Y+ L+ G+ +D    +A  +   ++S+G  PDV+ +SS+I  L     +EEA++L
Sbjct: 523 PNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQL 582

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+  +  +   +P    YN +L  LCK+  I ++ID    M+  GC P+  T  I +  L
Sbjct: 583 FH--VVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGL 640

Query: 590 KEK--LEAPQD 598
             +  L+  QD
Sbjct: 641 AHEGLLKEAQD 651



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 222/435 (51%), Gaps = 8/435 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E+ N  P  G +Q    ++ +L++    S  +  +E +   M  +  +  E +F  + + 
Sbjct: 234 ELLNRLPSYG-FQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRF 292

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           + +  +VE AI++   M  E  C       N V+N I ++G    A +  N +       
Sbjct: 293 FCRGGMVERAIQVLEQMT-EHGCATNTTLCNIVINSICKQGRVDDAFKLLNDM---GSYG 348

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             P+T+++  V+K +CR    D+A +L  EM   NC P+  T+ T +  LC++  +++A+
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 408

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           +L+++M   GC    VT+N L+NG C  G +  A +L  +M    C PN +TY TL+ GL
Sbjct: 409 MLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGL 465

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C    LD A  L+  M+   C PN VT+  +++   + G   +   ++  M E     N 
Sbjct: 466 CNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNL 525

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+TL+ G+ K+  +EDA++L   ++ KG  P+ + +S++I  L +  + +EA ++   
Sbjct: 526 ITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHV 585

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           + + G    A  Y+ ++ G  +  +   A++ +  M  N C+ NE  Y +LI GL  +G 
Sbjct: 586 VQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGL 645

Query: 488 LREARMVWTQMLSRG 502
           L+EA+ + + + SRG
Sbjct: 646 LKEAQDLLSVLCSRG 660



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 194/419 (46%), Gaps = 34/419 (8%)

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
           DG  P       LI  LC+ G    AA+++      G   +   YNTL+ G C  G+LD 
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  L+  M  +   P+  TY  +I  L   GR  D   +L  M  R    N   Y+ L+ 
Sbjct: 130 ARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLE 186

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
            + +    E AM +  +M  KGC PN V Y+ +I+G+CR G+ D+A E+L  + + G   
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQP 246

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  +Y++L+KG   S +     E++ +M + NC+ NEV + +LI   C  G +  A  V 
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 306

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            QM   GC  +    + +I+ +C  G V++A KL N+M        PD  +Y  +L  LC
Sbjct: 307 EQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSY--GCNPDTISYTTVLKGLC 364

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           +      + +LLN M+   C P+ VT N F+  L +K          L E AI L ++  
Sbjct: 365 RAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQK---------GLIEQAIMLIEQMS 415

Query: 616 TSG-------------GFKI---VEVMLQKFLS----PQTSTWERVVQELCRPKRIQAA 654
             G             GF +   ++  L+ F S    P T T+  ++  LC  +R+  A
Sbjct: 416 EHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGA 474



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 136/329 (41%), Gaps = 67/329 (20%)

Query: 58  NAKSEQPFSDEIFNSTPKLGSYQLGDST--FYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
           N+  +Q   D+ F     +GSY     T  + ++++    +  +   + +L  M R    
Sbjct: 326 NSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCP 385

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
             E +F        +  L+E+AI L   M  E  C   V ++N+++N    +G    ALE
Sbjct: 386 PNEVTFNTFICILCQKGLIEQAIMLIEQM-SEHGCTVGVVTYNALVNGFCVQGHIDSALE 444

Query: 176 FYNH----------------IVNAKHMN-------------ILPNTLTFNLVIKTVCRLG 206
            +                  + NA+ ++               PN +TFN+++   C+ G
Sbjct: 445 LFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKG 504

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDG------------------------------ 236
            ++ AI+L  +M    C P++ TY TL+DG                              
Sbjct: 505 FLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFS 564

Query: 237 -----LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
                L KE+R++EAV L   +Q  G  P  V +N ++ GLCK  E+  A      M   
Sbjct: 565 SIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSN 624

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           GC+PNE TY  LI GL  +G L +A  LL
Sbjct: 625 GCMPNESTYIILIEGLAHEGLLKEAQDLL 653


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 157/498 (31%), Positives = 269/498 (54%), Gaps = 7/498 (1%)

Query: 94  ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH--TMVDEFHCK 151
           +NS +  S++  L    R  R+    S +   K  G    +++   + +    +D F   
Sbjct: 66  SNSSNTISVDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVT 125

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
            TV S N ++N + +      A+  +  +     + I P+ +TF  +I  VC  G +  A
Sbjct: 126 HTVYSLNILINCLCRLNHVDFAVSVWGKMFK---LGIQPDVITFTTLINGVCNEGKIKVA 182

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           ++L+ EM     EPD+ +Y TL++GLC     + AV +  +M+ +GC P  VT+N +I+ 
Sbjct: 183 VELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDS 242

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK+  +  A   +  M  +G  P+ +TYN+++HGLC  G L++A  L  RM  + C P+
Sbjct: 243 LCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPD 302

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY  II+ L K     D A  L  M ++    +   Y+T++ GL   G+  +A++L+K
Sbjct: 303 VVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFK 362

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M +KGCKP+ V Y+ +ID LC+    ++A E L EM++ G   NA TYS+++ GF   G
Sbjct: 363 KMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLG 422

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +  +A +++K+M   N + N + +S+L+ GLC++G + EAR V+  M  +G +P++  Y+
Sbjct: 423 QLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYN 482

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           ++++G C    + EA K+F  M  +     PD+ +YNIL+N  C    +  +  LL  M 
Sbjct: 483 ALMNGYCLRCKMNEARKVFEIM--VGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMS 540

Query: 572 DRGCDPDLVTCNIFLTAL 589
            +   P+ VT N  +  L
Sbjct: 541 VKKLTPNTVTYNTIMKGL 558



 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 166/534 (31%), Positives = 280/534 (52%), Gaps = 14/534 (2%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFK-SLEMV--LYRMRREKRVVLEKSF 121
           F+  ++    KLG  Q    TF +LI    N G  K ++E+   + R   E  V+   + 
Sbjct: 146 FAVSVWGKMFKLG-IQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTL 204

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           I      G  ++   A+ +F  M ++  CK  V ++N++++ + ++ L + A++F + +V
Sbjct: 205 INGLCNSGNTNM---AVHVFKKM-EQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMV 260

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
                 I P+ +T+N ++  +C LG ++ A +LF+ M    C+PD+ TY  ++D L K+ 
Sbjct: 261 GR---GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDR 317

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            +++A   L EM   G  P  VT+  +++GLC  G+L  A +L   M  KGC P+ V YN
Sbjct: 318 LVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYN 377

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           T+I  LC    ++ A+  L  MV     PN VTY TI++G   LG+  +  ++   M  R
Sbjct: 378 TIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR 437

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               N   +S L+ GL +EG   +A  +++ M EKG +PN   Y+AL++G C   K +EA
Sbjct: 438 NVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEA 497

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            ++   M+  GCA +  +Y+ L+ G+  S +  KA  +   M+      N V Y+ ++ G
Sbjct: 498 RKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKG 557

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC  G+L +A+ ++ +M S G  P ++ YS +++GLC  G ++EALKLF  M   E K +
Sbjct: 558 LCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSM--KEKKLE 615

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA-LKEKLE 594
           PD+  Y IL+  +     +  +  L + +   G  P   T N+ +   LKE L 
Sbjct: 616 PDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLS 669



 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 146/521 (28%), Positives = 257/521 (49%), Gaps = 27/521 (5%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++A+  F+ M    + + ++  F   L  I +   Y   +   N +       +     
Sbjct: 74  VDDALASFYRMA-RMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQM---DLFGVTHTVY 129

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           + N++I  +CRL  VD A+ ++ +M     +PD+ T+ TL++G+C E ++  AV L +EM
Sbjct: 130 SLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEM 189

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  +++N LINGLC +G    A  +   M   GC PN VTYNT+I  LC    +
Sbjct: 190 VRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLV 249

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           + A+  L  MV     P+ +TY +I++GL  LG+  +  R+   ME+     +   Y+ +
Sbjct: 250 NDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNII 309

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I  L+K+    DA     +M+++G  P+ V Y+ ++ GLC +G+ +EA  +  +M   GC
Sbjct: 310 IDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGC 369

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +   Y++++    +    + A+E   +M       N V YS ++HG C  G+L EA  
Sbjct: 370 KPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQ 429

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M+ R   P+ + +S ++ GLC  G V EA  +F  M   E   +P+++TYN L+N 
Sbjct: 430 LFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMT--EKGVEPNIYTYNALMNG 487

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
            C +  ++ +  +   M+ +GC PDL + NI +               + N         
Sbjct: 488 YCLRCKMNEARKVFEIMVGKGCAPDLHSYNILING-------------YCNS-------- 526

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +R      ++  M  K L+P T T+  +++ LC   R+  A
Sbjct: 527 RRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDA 567



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 221/399 (55%), Gaps = 4/399 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EA RLF  M ++  CK  V ++N +++ + ++ L + A +F + +V+     I P+ +
Sbjct: 284 LNEATRLFKRM-EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQ---GIPPDVV 339

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  ++  +C LG ++ AI+LF++M  + C+PD+  Y T++D LCK+  +++A+  L EM
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEM 399

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  VT++ +++G C  G+L  A +L   M  +  +PN +T++ L+ GLC +G +
Sbjct: 400 VDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMV 459

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  + + M      PN  TY  ++NG     +  +  +V   M  +    + + Y+ L
Sbjct: 460 SEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNIL 519

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G     + + A  L  QM  K   PNTV Y+ ++ GLC VG+  +A+E+  +M ++G 
Sbjct: 520 INGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGM 579

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                TYS L+ G  + G   +A++++K M +     + + Y++LI G+   GKL  A+ 
Sbjct: 580 LPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKG 639

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           +++++ + G +P    Y+ MI GL   G  +EA +LF +
Sbjct: 640 LFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRK 678


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 188/675 (27%), Positives = 327/675 (48%), Gaps = 92/675 (13%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFK 126
           E+FN   +   ++    T+  +IQ     G+F ++E VL   R +    +LE  +I   K
Sbjct: 25  EMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGAMK 84

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           +YG+   V+EA+ +F  M D ++C+ +V S+N+++N++++ G + +A + +   +  K++
Sbjct: 85  SYGRKGKVQEAVDVFERM-DFYNCEPSVLSYNAIMNILVESGYFKQAHKVF---LRMKNV 140

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I+P+  TF + IK+ CR     +A++L   M  + C+ +   YCT++ G  +EN   EA
Sbjct: 141 GIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEA 200

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L ++M   G FP   TFN L++ LCK GE+  + +L++ +  KG   N  T+N  I G
Sbjct: 201 YELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQG 260

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK----------LGRAVDGA---- 352
           LC KG L  A+S+LD ++     P+ VTY T+I GL K          L + V+G     
Sbjct: 261 LCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPD 320

Query: 353 ---------------------RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
                                ++L     + F  +E+ Y +LI+GL +  + + A+ L+ 
Sbjct: 321 GFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFN 380

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
             + KG KP  ++Y+ LI GLC+ G   +A +++ EM  NGC+++ +TY+ ++ G  + G
Sbjct: 381 AALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMG 440

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
               A  +  D      V +   ++ LI G C+  K+     +  +M S G  PDV+ Y+
Sbjct: 441 CVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYN 500

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           S+++GL  A   E+ ++ F  M  +E    P+  TYNIL  +LCK   ++ ++DL++ ++
Sbjct: 501 SVLNGLSKAVKNEDLMETFETM--VEKGCVPNKITYNILTESLCKAGKVNEALDLVDEIL 558

Query: 572 DRGCDPDLV------------------------------------TCNIFLTALKEKLEA 595
           ++G  PD V                                    T NI + A  EKL+ 
Sbjct: 559 NKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDL 618

Query: 596 PQDGTDFLN-------------ELAIRLF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
                 FL               + I  F     T  G+K +  M++K   P  +T+ RV
Sbjct: 619 HMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRV 678

Query: 642 VQELCRPKRIQAAIN 656
           +  LC   R+  A++
Sbjct: 679 INCLCVQHRVHEAVD 693



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 280/531 (52%), Gaps = 10/531 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E+FN   ++G +    STF  L+      G+ +  E +L ++ ++       +F    + 
Sbjct: 202 ELFNDMLRIGIFP-DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQG 260

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
             +  ++  A+ +  +++ E      V ++N+++  + +      A ++ + +VN     
Sbjct: 261 LCRKGMLSGAMSMLDSVIRE-GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNG---G 316

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           + P+  T+N +I   C++G++ NA ++ +    +   PD +TYC+L++GLC+ + +D A+
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRAL 376

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L +     G  PT + +N+LI GLC+ G + +A ++++ M   GC  +  TYN +I+GL
Sbjct: 377 ALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGL 436

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G +  A +L++  +A   +P+  T+ T+I+G  K  +     ++L  M       + 
Sbjct: 437 CKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDV 496

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+++++GL K  K ED M+ ++ M+EKGC PN + Y+ L + LC+ GK +EA +++ E
Sbjct: 497 ITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDE 556

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV-YNEVCYSVLIHGLCEDG 486
           ++N G   +  ++++++ GF  +G    A ++++ M +   V +    Y+++I+   E  
Sbjct: 557 ILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKL 616

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            L     ++ +M + GC PD   Y  MI G C  G+ +   K   EM+  E    P + T
Sbjct: 617 DLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMI--EKGFIPSLTT 674

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
           +  ++N LC Q  +  ++D+++ M+  G  P++V  N    A K+ + AP+
Sbjct: 675 FGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV--NSISEADKKVVAAPK 723



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 207/422 (49%), Gaps = 13/422 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y   G  ++ E +L     +  V  E ++  +     +   ++ A+ LF+  
Sbjct: 323 TYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAA 382

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +   K TV  +N ++  + QEGL  +AL+  N +          +  T+NLVI  +C+
Sbjct: 383 LGK-GLKPTVILYNMLIKGLCQEGLILQALQMMNEM---SENGCSSDIWTYNLVINGLCK 438

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G V +A  L  +   +   PD++T+ TL+DG CK+ +++  + +L++M   G  P  +T
Sbjct: 439 MGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVIT 498

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N ++NGL K  +     +  + M  KGC+PN++TYN L   LC  G +++A+ L+D ++
Sbjct: 499 YNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEIL 558

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-EERKFHVNEYIYSTLISGLFKEGKA 383
                P+ V++ TII+G    G      ++   M E+ K       Y+ +I+   ++   
Sbjct: 559 NKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDL 618

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
               KL+ +M   GC P+T  Y  +IDG C  G  D   + L EMI  G   +  T+  +
Sbjct: 619 HMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRV 678

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE-DGKLREA-RMVWTQMLSR 501
           +       + H+AV+I   M  N  V        +++ + E D K+  A ++V   +L R
Sbjct: 679 INCLCVQHRVHEAVDIIHFMVHNGIV------PEVVNSISEADKKVVAAPKIVVEDLLKR 732

Query: 502 GC 503
            C
Sbjct: 733 SC 734


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  277 bits (708), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/536 (30%), Positives = 277/536 (51%), Gaps = 20/536 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ +LI  +  + DF+    +L  M  EKR ++  + ++  I K       V+ A+  + 
Sbjct: 169 TYSTLINGFCKARDFQQAYRLLDEM--EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYR 226

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M  + +C  +V ++  +++ + +      A      ++ A      PN +T+N +I   
Sbjct: 227 DM--QRNCAPSVITYTILVDALCKSARISDASLILEDMIEA---GCAPNVVTYNTLINGF 281

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+LG +D A+ LF +M   +C PD++TY  L+DG CK+ R  +   LL EM   GC P  
Sbjct: 282 CKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNF 341

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +T+N L++ L K+G+   A  L   M  + C P+  T+N +I   C  G LD A  L   
Sbjct: 342 ITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQL 401

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C+P+  TY  +I+G  +  R  D  ++L  M E     +   Y++++SGL K  +
Sbjct: 402 MTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQ 461

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++A ++++ +   G   + V  S LIDGLC+  + D+AE++L EM  NG A +   Y+ 
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ GF ++ +  K++  + +M    CV   + YS++I  LC+  ++R+  M+   ML RG
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             PD + Y+S+I GLC + S +EA +L+  M   +    P V TYN+L++ LCK S +  
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLM--KQTGCAPTVVTYNVLVDKLCKVSRLDE 639

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           +I LL  M   GC PD VT N       +  E         ++ A RLF+  ++ G
Sbjct: 640 AIHLLEVMESDGCLPDTVTYNSVFDGFWKSAE---------HDKAFRLFQAMKSRG 686



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/538 (29%), Positives = 282/538 (52%), Gaps = 22/538 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A++ F     +   K +  + N +L+  +++    +A E Y+   N +     P+++
Sbjct: 112 LDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRK---KKAQEAYDLFKNHRCGLCSPDSI 168

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T++ +I   C+      A +L  EM  R   P    Y T++ GLC   R+D A++   +M
Sbjct: 169 TYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM 228

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           Q + C P+ +T+ +L++ LCK+  +  A+ ++++M   GC PN VTYNTLI+G C  GN+
Sbjct: 229 QRN-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 287

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+AV L ++M+ + C P+  TY  +I+G  K  R  DGA++L  M +     N   Y+TL
Sbjct: 288 DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 347

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L K GK  DA  L + M+ + CKP+   ++ +ID  C+VG+ D A E+   M + GC
Sbjct: 348 MDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGC 407

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             + +TY+ ++ G   + +   A ++ + M +  C  + V Y+ ++ GLC+  ++ EA  
Sbjct: 408 LPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYE 467

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           V+  + + G   DVV  S++I GLC +  +++A KL  EM      S PDV  Y IL++ 
Sbjct: 468 VYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREM--ERNGSAPDVVAYTILIHG 525

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---- 609
            CK   +  S+   + M+D+GC P ++T +I +  L +     +DG   L  +  R    
Sbjct: 526 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV-RDGCMLLKTMLERGVTP 584

Query: 610 -----------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                      L K       +++ ++M Q   +P   T+  +V +LC+  R+  AI+
Sbjct: 585 DAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIH 642



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 194/357 (54%), Gaps = 3/357 (0%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           CK +  +FN ++++  + G    A E +  + +      LP+  T+N++I   CR   +D
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD---RGCLPDIYTYNIMISGACRANRID 428

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +A QL   M    C PD+ TY +++ GLCK +++DEA  + + ++  G F   VT + LI
Sbjct: 429 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 488

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           +GLCK+  L  A KL+  M   G  P+ V Y  LIHG C    LDK+++    M+   C+
Sbjct: 489 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 548

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P  +TY  +I+ L K  R  DG  +L +M ER    +  +Y+++I GL K    ++A +L
Sbjct: 549 PTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYEL 608

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +K M + GC P  V Y+ L+D LC+V + DEA  +L  M ++GC  +  TY+S+  GF++
Sbjct: 609 YKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWK 668

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           S +  KA  +++ M    C      YS+L+  L  + K+ +A  +W + L  G   D
Sbjct: 669 SAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 250/508 (49%), Gaps = 35/508 (6%)

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLG--LVDNAI-QLFREMPVRNCEPDIYTYCT 232
           FY      + + +L ++  F L  + +C  G  LV + + ++ +++   +     + +CT
Sbjct: 65  FYAQAAK-EFLRVLDSSEDFELASRRLCEFGGYLVPSVVGRVLQQLDDLDKAVKFFDWCT 123

Query: 233 --------------LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                         L+    ++ +  EA  L    +   C P  +T++ LING CK  + 
Sbjct: 124 GQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDF 183

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
            +A +L+D M  +G +P+   YNT+I GLC  G +D A+ +  R +   C P+ +TY  +
Sbjct: 184 QQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRNCAPSVITYTIL 242

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           ++ L K  R  D + +L  M E     N   Y+TLI+G  K G  ++A+ L+ QM+E  C
Sbjct: 243 VDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSC 302

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+   Y+ LIDG C+  +P +  ++L EM+  GC  N  TY++LM    +SGK   A  
Sbjct: 303 SPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFN 362

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           + + M + +C  +   ++++I   C+ G+L  A  ++  M  RGC PD+  Y+ MI G C
Sbjct: 363 LAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGAC 422

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
            A  +++A +L   M   E    PDV TYN +++ LCK S +  + ++   + + G   D
Sbjct: 423 RANRIDDARQLLERM--TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLD 480

Query: 579 LVTCNIFLTAL--------KEKL--EAPQDGT--DFLN-ELAIRLF-KRQRTSGGFKIVE 624
           +VTC+  +  L         EKL  E  ++G+  D +   + I  F K  +         
Sbjct: 481 VVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS 540

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQ 652
            ML K   P   T+  V+ +LC+  R++
Sbjct: 541 EMLDKGCVPTVITYSIVIDKLCKSARVR 568



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 228/460 (49%), Gaps = 4/460 (0%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +   G+     ++  +M          ++  +   Y K    ++  +L   M
Sbjct: 273 TYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM 332

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V ++ C+    ++N++++ +++ G Y  A      ++     +  P+  TFNL+I   C+
Sbjct: 333 V-KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML---RRDCKPSHFTFNLMIDMFCK 388

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G +D A +LF+ M  R C PDIYTY  ++ G C+ NR+D+A  LL+ M   GC P  VT
Sbjct: 389 VGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVT 448

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N +++GLCK  ++  A ++ + +   G   + VT +TLI GLC    LD A  LL  M 
Sbjct: 449 YNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREME 508

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +   P+ V Y  +I+G  K  +          M ++        YS +I  L K  +  
Sbjct: 509 RNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVR 568

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           D   L K M+E+G  P+ +VY+++IDGLC+    DEA E+   M   GCA    TY+ L+
Sbjct: 569 DGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLV 628

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
               +  +  +A+ + + M  + C+ + V Y+ +  G  +  +  +A  ++  M SRGC 
Sbjct: 629 DKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCS 688

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           P    YS ++  L     +++A++++ E L       P++
Sbjct: 689 PTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEI 728


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  275 bits (703), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 147/411 (35%), Positives = 234/411 (56%), Gaps = 7/411 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T N ++   C    + +A+ L  +M     +PD +T+ TL+ GL + NR  EAV L
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           +D M V GC P  VT+ +++NGLCK G++  A  L+  M      P  V YNT+I  LC 
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             N++ A++L   M      PN VTY ++I  L   GR  D +R+L  M ERK + N   
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S LI    KEGK  +A KL+ +M+++   P+   YS+LI+G C   + DEA+ +   MI
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +  C  N  TY++L+KGF ++ +  + +E++++M++   V N V Y+ LIHG  +  +  
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A++V+ QM+S G  PD++ YS ++ GLCN G VE AL +F  +     K +PD++TYNI
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL--QRSKMEPDIYTYNI 506

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT-----ALKEKLEA 595
           ++  +CK   +    DL  S+  +G  P++VT    ++      LKE+ +A
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 139/435 (31%), Positives = 222/435 (51%), Gaps = 5/435 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + + NS+LN          A+     +V    M   P++ TFN +I  + R      A+ 
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMV---EMGYQPDSFTFNTLIHGLFRHNRASEAVA 207

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L   M V+ C+PD+ TY  +++GLCK   +D A+ LL +M+     P  V +N +I+ LC
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
               +  A  L   M  KG  PN VTYN+LI  LC  G    A  LL  M+  K  PN V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           T+  +I+  VK G+ V+  ++   M +R    + + YS+LI+G     + ++A  +++ M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + K C PN V Y+ LI G C+  + DE  E+  EM   G   N  TY++L+ GFF++ + 
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A  ++K M  +  + + + YS+L+ GLC +GK+  A +V+  +     +PD+  Y+ M
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I G+C AG VE+   LF  +     K  P+V TY  +++  C++     +  L   M + 
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVK--PNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565

Query: 574 GCDPDLVTCNIFLTA 588
           G  PD  T N  + A
Sbjct: 566 GPLPDSGTYNTLIRA 580



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 142/473 (30%), Positives = 232/473 (49%), Gaps = 37/473 (7%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  +  +V ++     P+ + F+ ++  + ++   D  I L  +M       ++YTY  
Sbjct: 65  AVNLFGDMVKSRP---FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C+ ++L  A+ +L +M   G  P  VT N L+NG C    +  A  LV  M   G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+  T+NTLIHGL       +AV+L+DRMV   C P+ VTYG ++NGL K G      
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  ME+ K      IY+T+I  L       DA+ L+ +M  KG +PN V Y++LI  L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+  +A  +L +MI      N  T+S+L+  F + GK  +A +++ +M K +   + 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             YS LI+G C   +L EA+ ++  M+S+ C P+VV Y+++I G C A  V+E ++LF E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 533 M---------------------------------LCLEPKSQPDVFTYNILLNALCKQSN 559
           M                                   +     PD+ TY+ILL+ LC    
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
           +  ++ +   +     +PD+ T NI +  +  K    +DG D    L+++  K
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVK 533



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 207/416 (49%), Gaps = 6/416 (1%)

Query: 120 SFIFIFKAYG--KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           SF F    +G  + +   EA+ L   MV +  C+  + ++  V+N + + G    AL   
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLL 244

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
             +   K   I P  + +N +I  +C    V++A+ LF EM  +   P++ TY +L+  L
Sbjct: 245 KKMEQGK---IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           C   R  +A  LL +M      P  VTF+ LI+   K G+L  A KL D M  +   P+ 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
            TY++LI+G C+   LD+A  + + M++  C PN VTY T+I G  K  R  +G  +   
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M +R    N   Y+TLI G F+  + ++A  ++KQM+  G  P+ + YS L+DGLC  GK
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            + A  +   +  +    + +TY+ +++G  ++GK     +++  ++      N V Y+ 
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           ++ G C  G   EA  ++ +M   G  PD   Y+++I      G    + +L  EM
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 205/429 (47%), Gaps = 18/429 (4%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +LD+AV L  +M     FP+ V F+ L++ + K  +      L + M   G   N  TY+
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI+  C +  L  A+++L +M+     P+ VT  +++NG     R  D   ++  M E 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            +  + + ++TLI GLF+  +A +A+ L  +M+ KGC+P+ V Y  +++GLC+ G  D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +L +M           Y++++         + A+ ++ +M       N V Y+ LI  
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC  G+  +A  + + M+ R   P+VV +S++I      G + EA KL++EM  ++    
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM--IKRSID 358

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PD+FTY+ L+N  C    +  +  +   M+ + C P++VT N  +     K +   +G +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-KAKRVDEGME 417

Query: 602 FLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              E++ R                F+ +       + + M+   + P   T+  ++  LC
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477

Query: 647 RPKRIQAAI 655
              +++ A+
Sbjct: 478 NNGKVETAL 486



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 156/348 (44%), Gaps = 62/348 (17%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI+   N G +     +L  M   K      +F  +  A+ K   + EA +L+  M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352

Query: 145 VDEFHCKRTVK----SFNSVLNVIIQEGLYHRALEFYNHIVNAKHM-------NILPNTL 193
           +     KR++     +++S++N              ++ +  AKHM       +  PN +
Sbjct: 353 I-----KRSIDPDIFTYSSLIN----------GFCMHDRLDEAKHMFELMISKDCFPNVV 397

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMP--------------------VRNCE--------- 224
           T+N +IK  C+   VD  ++LFREM                      R C+         
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457

Query: 225 ------PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                 PDI TY  L+DGLC   +++ A+++ + +Q     P   T+N++I G+CK G++
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
                L  ++ LKG  PN VTY T++ G C KG  ++A +L   M     +P+  TY T+
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
           I   ++ G     A ++  M   +F V +     L++ +  +G+ + +
Sbjct: 578 IRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVTNMLHDGRLDKS 624



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 140/309 (45%), Gaps = 18/309 (5%)

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R F    Y Y  +      + K +DA+ L+  M++    P+ V +S L+  + ++ K D 
Sbjct: 40  RDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL 99

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
              +  +M N G + N +TYS L+  F    +   A+ +   M K     + V  + L++
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN 159

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C   ++ +A  +  QM+  G +PD   ++++IHGL       EA+ L + M+      
Sbjct: 160 GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV--KGC 217

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           QPD+ TY I++N LCK+ +I  ++ LL  M     +P +V  N  + AL    +   D  
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN-YKNVNDAL 276

Query: 601 DFLNEL---AIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
           +   E+    IR            L    R S   +++  M+++ ++P   T+  ++   
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336

Query: 646 CRPKRIQAA 654
            +  ++  A
Sbjct: 337 VKEGKLVEA 345



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 23/201 (11%)

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           AV ++ DM K+    + V +S L+  + +  K      +  QM + G   ++  YS +I+
Sbjct: 65  AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
             C    +  AL +  +M+ L    +PD+ T N LLN  C  + IS ++ L+  M++ G 
Sbjct: 125 CFCRRSQLSLALAVLAKMMKL--GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            PD  T N  +  L                     F+  R S    +V+ M+ K   P  
Sbjct: 183 QPDSFTFNTLIHGL---------------------FRHNRASEAVALVDRMVVKGCQPDL 221

Query: 636 STWERVVQELCRPKRIQAAIN 656
            T+  VV  LC+   I  A++
Sbjct: 222 VTYGIVVNGLCKRGDIDLALS 242


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  275 bits (702), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 157/441 (35%), Positives = 239/441 (54%), Gaps = 9/441 (2%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C+  V S+N V++     G  H ALE    +   K     P+  T   +I  +   G +D
Sbjct: 108 CEPDVCSYNIVISGFCNAGDLHAALELLEEM---KSAGFAPDAFTHTPIITAMANAGDLD 164

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
            A+   R M    C+P++ TY  L+    +  +L+EA+ LL+EM+  GC P  VT+NVL+
Sbjct: 165 GAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLV 221

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           + LCK   +G A  +V  M   G  PN +T+N+L+ G C +GN+D A  LL  MVA    
Sbjct: 222 DALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR 281

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PN VTY  +I+GL K  + ++   VL  M+ R    + + YS LI GL K  K E+A ++
Sbjct: 282 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQM 341

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            ++M   GC P+ VVYS++I   C+ GK  EA++ L EM     + +  TY++++ G  +
Sbjct: 342 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 401

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            GK  +A  I + M ++  V  +V  YS +I+GLC+   L EA+ +  +M   GC PDVV
Sbjct: 402 LGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 461

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+++I GLC  G +EEA  L   M        P+V TY  L++ LCK   +  +  ++ 
Sbjct: 462 TYTTIIDGLCKCGRLEEAEYLLQGM--KRAGCAPNVVTYTTLISGLCKARKVDEAERVME 519

Query: 569 SMMDRGCDPDLVTCNIFLTAL 589
            M + GC P+LVT N  +  L
Sbjct: 520 EMRNAGCPPNLVTYNTMVNGL 540



 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 149/508 (29%), Positives = 261/508 (51%), Gaps = 16/508 (3%)

Query: 65  FSDEIFNS-TPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF 123
           F  E+  S  P + SY +       +I  + N+GD  +   +L  M+         +   
Sbjct: 100 FRSELLASCEPDVCSYNI-------VISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTP 152

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  A   A  ++ A+    +M     C   V ++ +++    +      A++    +   
Sbjct: 153 IITAMANAGDLDGAMDHLRSM----GCDPNVVTYTALIAAFARAKKLEEAMKLLEEM--- 205

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +     PN +T+N+++  +C+L +V  A  + ++M      P++ T+ +L+DG CK   +
Sbjct: 206 RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNV 265

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A  LL  M   G  P  VT++ LI+GLCK+ +   A ++++ M  +G  P+  TY+ L
Sbjct: 266 DDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSAL 325

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           IHGLC    +++A  +L RM  S C P+ V Y +II+   K G+ ++  + L  M +++ 
Sbjct: 326 IHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRK 385

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLCRVGKPDEAE 422
             +   Y+T+I GL K GK  +A  + +QM E G   P+ V YS +I+GLC+     EA+
Sbjct: 386 SPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQ 445

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           ++L  M   GC  +  TY++++ G  + G+  +A  + + M +  C  N V Y+ LI GL
Sbjct: 446 KLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGL 505

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C+  K+ EA  V  +M + GC P++V Y++M++GLC +G ++EA +L   M     +  P
Sbjct: 506 CKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSP 565

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSM 570
           D  TY  ++NAL     +  +  LL  M
Sbjct: 566 DAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 159/480 (33%), Positives = 237/480 (49%), Gaps = 22/480 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
              ++N +++ + R      A  LFR   + +CEPD+ +Y  ++ G C    L  A+ LL
Sbjct: 76  TAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELL 135

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           +EM+  G  P   T   +I  +   G+L  A   +D++   GC PN VTY  LI      
Sbjct: 136 EEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARA 192

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             L++A+ LL+ M    C PN VTY  +++ L KL        V+  M E  F  N   +
Sbjct: 193 KKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTF 252

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           ++L+ G  K G  +DA KL   M+ KG +PN V YSALIDGLC+  K  EA+E+L EM  
Sbjct: 253 NSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKT 312

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   +AFTYS+L+ G  ++ K  +A ++ + MA + C  + V YS +IH  C+ GKL E
Sbjct: 313 RGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE 372

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A+    +M  +   PDVV Y+++I GLC  G + EA  +  +M        PDV TY+ +
Sbjct: 373 AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQ-ESGDVLPDVVTYSTV 431

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVT----------------CNIFLTALKEKLE 594
           +N LCK   +  +  LL+ M   GC+PD+VT                    L  +K    
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 491

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           AP   T     L   L K ++     +++E M      P   T+  +V  LC   RI+ A
Sbjct: 492 APNVVT--YTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEA 549



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 139/292 (47%), Gaps = 26/292 (8%)

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
           F    + +++L+  L +  K  +A  L++  +   C+P+   Y+ +I G C  G    A 
Sbjct: 73  FSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAAL 132

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           E+L EM + G A +AFT++ ++     +G    A++  + M    C  N V Y+ LI   
Sbjct: 133 ELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---CDPNVVTYTALIAAF 189

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
               KL EA  +  +M  RGC P++V Y+ ++  LC    V  A  +  +M  +E    P
Sbjct: 190 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM--IEGGFAP 247

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           +V T+N L++  CK+ N+  +  LL  M+ +G  P++VT +  +           DG   
Sbjct: 248 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALI-----------DG--- 293

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  L K Q+     +++E M  + ++P   T+  ++  LC+  +I+ A
Sbjct: 294 -------LCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEA 338



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 110/235 (46%), Gaps = 23/235 (9%)

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G +  AF+++SL++      K  +A ++++     +C  +   Y+++I G C  G L  A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +  +M S G  PD   ++ +I  + NAG ++ A+     M C      P+V TY  L+
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGC-----DPNVVTYTALI 186

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-------------KEKLE---A 595
            A  +   +  ++ LL  M +RGC P+LVT N+ + AL             K+ +E   A
Sbjct: 187 AAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFA 246

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
           P   T   N L     KR       K++ +M+ K + P   T+  ++  LC+ ++
Sbjct: 247 PNVMT--FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 299


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  274 bits (700), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 176/617 (28%), Positives = 300/617 (48%), Gaps = 36/617 (5%)

Query: 44  AVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLE 103
           A+S   ++ T  +  A  E     ++ NS      +    + +  +IQ    +G F  +E
Sbjct: 52  AISDQDRLLTALREQADPEAAL--QMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLME 109

Query: 104 MVLYRMRREKRVV---LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSV 160
            ++  MRRE       + +SF+   ++Y +    ++A+ L    ++ F  +     +N +
Sbjct: 110 GLVREMRREGHEAGAGVVRSFV---ESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHL 166

Query: 161 LNVIIQEGLYHRALE-FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           LNV+  EG   + LE  YN + +     I P+ +T N +IK +CR   V  A+ +  EM 
Sbjct: 167 LNVL-AEGSRMKLLESVYNEMTDR---GIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMS 222

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                PD  T+ TLM G  +E  ++ A+ +  +M   GC PT VT NVLING CK G + 
Sbjct: 223 SHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVE 282

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A   +      G  P++VTYNT +H LC  G++  A+ ++D M+     P+  TY T+I
Sbjct: 283 DALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVI 342

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           N L K G   +   ++  M +R    +   ++TLI  L  + + E+A+ L +++  KG  
Sbjct: 343 NCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLS 402

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+   ++ LI+ LC+VG P     +  EM ++GCA +  TY+ L+      GK   A+++
Sbjct: 403 PDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDL 462

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            K+M  N C  + V Y+ +I  LC+  ++ EA  V+ QM + G     V ++++I GLC 
Sbjct: 463 LKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCK 522

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           A  +++A +L  +M  ++   QP   TYN +L   CKQ ++  + D+L +M   G + D+
Sbjct: 523 AKRIDDATELIEQM--VKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDV 580

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
           VT    +                       L K  RT    K++  M  K + P    + 
Sbjct: 581 VTYGTLING---------------------LCKAGRTQVALKLLRGMRIKGIRPTPKAYN 619

Query: 640 RVVQELCRPKRIQAAIN 656
            V+Q L R   ++ A++
Sbjct: 620 PVIQSLFRRNNLRDALS 636



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 253/506 (50%), Gaps = 7/506 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T  +LI+    +   ++  ++L  M        E +F  + + + +   +E A+R+   M
Sbjct: 197 TLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKM 256

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E  C  T  + N ++N   + G    AL +    +        P+ +T+N  +  +C+
Sbjct: 257 M-ETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD---GFEPDQVTYNTFVHCLCQ 312

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V +A+++   M     +PD++TY T+++ L K   LDEA  ++++M   GC P   T
Sbjct: 313 NGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTT 372

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI  LC    L  A  L   + +KG  P+  T+N LI+ LC  G+    + L + M 
Sbjct: 373 FNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMK 432

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +S C P+EVTY  +I+ L  +G+ V+   +L  ME      +   Y+T+I  L K+ + E
Sbjct: 433 SSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIE 492

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +++ QM   G   + V ++ LIDGLC+  + D+A E++ +M+  G   +  TY+S++
Sbjct: 493 EAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSIL 552

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             + + G   KA +I + M  N    + V Y  LI+GLC+ G+ + A  +   M  +G +
Sbjct: 553 THYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIR 612

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN-ISHS 563
           P   AY+ +I  L    ++ +AL LF EM   E    PD  TY I+   LC+    I  +
Sbjct: 613 PTPKAYNPVIQSLFRRNNLRDALSLFREM--TEVGEPPDALTYKIVFRGLCRGGGPIKEA 670

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
            D L  M+++G  P+  +  +    L
Sbjct: 671 FDFLVEMVNKGFMPEFSSFRMLAEGL 696



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 149/496 (30%), Positives = 251/496 (50%), Gaps = 10/496 (2%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + KA  +AH V  A+ +   M           +F +++   I+EG    AL      V  
Sbjct: 201 LIKALCRAHQVRTAVLMLEEM-SSHAVAPDETTFTTLMQGFIEEGSIEAALR-----VKT 254

Query: 184 KHMNI--LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           K M     P  +T N++I   C++G V++A+   ++      EPD  TY T +  LC+  
Sbjct: 255 KMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNG 314

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            +  A+ ++D M  +G  P   T+N +IN L KNGEL  A  +V+ M  +GCLP+  T+N
Sbjct: 315 HVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFN 374

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           TLI  LC +  L++A+ L   +      P+  T+  +IN L K+G    G R+   M+  
Sbjct: 375 TLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSS 434

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               +E  Y+ LI  L   GK  +A+ L K+M   GC  +TV Y+ +ID LC+  + +EA
Sbjct: 435 GCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEA 494

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           EE+  +M  +G + +A T+++L+ G  ++ +   A E+ + M K     + + Y+ ++  
Sbjct: 495 EEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTH 554

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C+ G L++A  +   M + G + DVV Y ++I+GLC AG  + ALKL   M     +  
Sbjct: 555 YCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPT 614

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           P    YN ++ +L +++N+  ++ L   M + G  PD +T  I    L       ++  D
Sbjct: 615 PKA--YNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFD 672

Query: 602 FLNELAIRLFKRQRTS 617
           FL E+  + F  + +S
Sbjct: 673 FLVEMVNKGFMPEFSS 688



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 227/476 (47%), Gaps = 42/476 (8%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           ++TF +L+Q +   G  ++   V  +M          +   +   Y K   VE+A+    
Sbjct: 230 ETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQ 289

Query: 143 T-MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             + D F   +   ++N+ ++ + Q G    AL+  + ++   H    P+  T+N VI  
Sbjct: 290 KEIADGFEPDQV--TYNTFVHCLCQNGHVSHALKVMDLMLQEGHD---PDVFTYNTVINC 344

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           + + G +D A  +  +M  R C PD  T+ TL+  LC +NRL+EA+ L  E+ V G  P 
Sbjct: 345 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPD 404

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             TFN+LIN LCK G+     +L + M   GC P+EVTYN LI  LC  G L  A+ LL 
Sbjct: 405 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLK 464

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M ++ C  + VTY TII+ L K  R  +   V   M+      +   ++TLI GL K  
Sbjct: 465 EMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAK 524

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + +DA +L +QM+++G +P+ + Y++++   C+ G   +A +IL  M  NG   +  TY 
Sbjct: 525 RIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYG 584

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNC-----VYNEV----------------------- 473
           +L+ G  ++G+   A+++ + M           YN V                       
Sbjct: 585 TLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEV 644

Query: 474 -------CYSVLIHGLCEDG-KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
                   Y ++  GLC  G  ++EA     +M+++G  P+  ++  +  GL N G
Sbjct: 645 GEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 700



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 146/302 (48%), Gaps = 39/302 (12%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FN ++N + + G  H  +  +  +   K     P+ +T+N++I  +C +G + NA+ 
Sbjct: 405 VYTFNILINALCKVGDPHLGIRLFEEM---KSSGCAPDEVTYNILIDHLCSMGKLVNALD 461

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L +EM    C     TY T++D LCK+ R++EA  + D+M   G   + VTFN LI+GLC
Sbjct: 462 LLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLC 521

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K   +  A +L++ M  +G  P+ +TYN+++   C +G+L KA  +L+ M A+    + V
Sbjct: 522 KAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVV 581

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TYGT+INGL K GR     ++L  M  +        Y+ +I  LF+     DA+ L+++M
Sbjct: 582 TYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREM 641

Query: 394 ME------------------------------------KGCKPNTVVYSALIDGLCRVGK 417
            E                                    KG  P    +  L +GL  +G 
Sbjct: 642 TEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGM 701

Query: 418 PD 419
            D
Sbjct: 702 DD 703


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 165/523 (31%), Positives = 269/523 (51%), Gaps = 29/523 (5%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V  +N VL  + + G   RALE +          + P  +T+N +I  +C+   +   ++
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRG--EMARDGVAPTIVTYNTIINGLCKSNDLGAGME 58

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           LF E+  R   PD+ TY TL+D LCK   L+EA  L  +M   GC P  VT++VLINGLC
Sbjct: 59  LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLC 118

Query: 274 KNGELGRAAKLVDNMFLKGC--LPNEVTYNTLIHGLCLKGNLDKAVSLLD--RMVASKCM 329
           K G +  A +L+  M  K C  LPN +TYN+ + GLC +    +A  L+   R  + +  
Sbjct: 119 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 178

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+ VT+ T+I+GL K G+  +   V   M    +  N   Y+ L++GL K  K E A  +
Sbjct: 179 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF-----TYSSLM 444
            + M++KG  P+ + YS L+D  C+  + DEA E+L  M + GC  N       T++ L+
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++G   +A  ++++M   N   + + +  LI GLC+ G++  AR +   M + G  
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 358

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P+VV Y++++HGLC +G +EEA +   EM  +     PD  TY  L+ ALC+ S    ++
Sbjct: 359 PNVVTYNALVHGLCKSGRIEEACQFLEEM--VSSGCVPDSITYGSLVYALCRASRTDDAL 416

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR--------------- 609
            L++ +   G DPD VT NI +  L +  +  Q  T  L E+  +               
Sbjct: 417 QLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAIT-VLEEMVGKGHQPDSFTFAACFSG 475

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           L +    +G  +++ V+L K + P  +T   ++  +CR  ++ 
Sbjct: 476 LHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLD 518



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 150/472 (31%), Positives = 232/472 (49%), Gaps = 68/472 (14%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N+V++++CR G    A+++FR                                   EM 
Sbjct: 4   YNIVLQSLCRAGDTARALEIFR----------------------------------GEMA 29

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            DG  PT VT+N +INGLCK+ +LG   +L + +  +G  P+ VTYNTLI  LC  G+L+
Sbjct: 30  RDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLE 89

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK---FHVNEYIYS 371
           +A  L   M +  C+PN VTY  +INGL K+GR +D AR L+    RK      N   Y+
Sbjct: 90  EARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR-IDEARELIQEMTRKSCDVLPNIITYN 148

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCK--PNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           + + GL K+    +A +L + + +   +  P+TV +S LIDGLC+ G+ DEA  +  +MI
Sbjct: 149 SFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 208

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   N  TY++L+ G  ++ K  +A  + + M       + + YSVL+   C+  ++ 
Sbjct: 209 AGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVD 268

Query: 490 EARMVWTQMLSRGCKPDV-----VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           EA  +   M SRGC P+V     V ++ +I G C AG+ E+A  LF EM  +    QPDV
Sbjct: 269 EALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEM--VAKNLQPDV 326

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            T+  L++ LCK   +  + D+L+ M + G  P++VT                      N
Sbjct: 327 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT---------------------YN 365

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            L   L K  R     + +E M+     P + T+  +V  LCR  R   A+ 
Sbjct: 366 ALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQ 417



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 231/455 (50%), Gaps = 9/455 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI     +GD +    +   M     V    ++  +     K   ++EA  L   M
Sbjct: 74  TYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEM 133

Query: 145 VDEFHCK--RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             +  C     + ++NS L+ + ++ +   A E    + +   + + P+T+TF+ +I  +
Sbjct: 134 TRK-SCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS-LRVSPDTVTFSTLIDGL 191

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ G +D A  +F +M      P++ TY  L++GLCK ++++ A  +++ M   G  P  
Sbjct: 192 CKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDV 251

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN-----EVTYNTLIHGLCLKGNLDKAV 317
           +T++VL++  CK   +  A +L+  M  +GC PN     +VT+N LI G C  GN ++A 
Sbjct: 252 ITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQAS 311

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           +L + MVA    P+ +T+G +I+GL K G+      +L  M       N   Y+ L+ GL
Sbjct: 312 ALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGL 371

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K G+ E+A +  ++M+  GC P+++ Y +L+  LCR  + D+A +++ E+ + G   + 
Sbjct: 372 CKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDT 431

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY+ L+ G ++SGK  +A+ + ++M       +   ++    GL   G L     +   
Sbjct: 432 VTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRV 491

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           +L++G  PD    SS++  +C +G +++   +  E
Sbjct: 492 VLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKE 526


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/589 (28%), Positives = 279/589 (47%), Gaps = 70/589 (11%)

Query: 70  FNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG 129
           F++     ++Q   ST+  +I+      +   ++ +L +M+ +     E  FI I   Y 
Sbjct: 61  FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYK 120

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +    E+A+++F+  + EF CK TV+ +N +L+ ++ E  +      Y    N K   ++
Sbjct: 121 RVGSAEQALKMFYR-IGEFGCKPTVRIYNHLLDALLSENKFQMINPLY---TNMKKDGLI 176

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT----------------- 232
           PN  T+N+++K +C+   VD A +LF EM  + C PD  TY T                 
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 233 -------------LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                        L+DG+CKE R++ A+ LL EM  +G  P  V+++ +IN LC +G + 
Sbjct: 237 AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVE 296

Query: 280 RAAKLVDNMFLK-----------------------------------GCLPNEVTYNTLI 304
            A  L   MFL+                                   GC PN V YNTLI
Sbjct: 297 LAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           HGLC  G+L++A+ + D+M  S C+PN  TY  +I+G  K G  V  +     M      
Sbjct: 357 HGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCR 416

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            N   Y+ ++  L K    + A  L ++M  +GC PNT+ ++  I GLC  G+ + A ++
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKL 476

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L  M  +GC  N  TY+ L+   F   K  +A  +++++   N   N V Y+ +++G   
Sbjct: 477 LERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSR 536

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G + EA  ++ + L RG  PD + Y++MIH  C  G V+ A +L   +  ++ +  PD+
Sbjct: 537 AGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK-EWHPDI 595

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
            TY  L+   C   NI  ++  L+  +++G  P+  T N  +    + L
Sbjct: 596 ITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSL 644



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 210/471 (44%), Gaps = 46/471 (9%)

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY  +++ L +E  +D    +L +M++DG       F  +ING  + G   +A K+   +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              GC P    YN L+  L  +        L   M     +PN  TY  ++  L K  R 
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED----------------------- 385
               ++ + M  +    +   Y+T++S L K GK +D                       
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMC 255

Query: 386 -------AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
                  A+KL  +MM+ G  PN V YS +I+ LC  G  + A  +  +M   GC AN  
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ L+KG F  GK ++A+++WK M ++ C  N V Y+ LIHGLC +G L EA  V  QM
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
              GC P+V  YS +I G   +G +  A + +N M  +    +P+V TY  +++ LCK S
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM--ISHGCRPNVVTYTCMVDVLCKNS 433

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--------KEKLEAPQDGTDFL------N 604
               +  L+  M   GC P+ +T N F+  L          KL     G   L      N
Sbjct: 434 MFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYN 493

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           EL   LF+  +    F + + +  + L P   T+  V+    R   +  A+
Sbjct: 494 ELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 143/305 (46%), Gaps = 28/305 (9%)

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +L  M+    +  E ++  +I+G  + G AE A+K++ ++ E GCKP   +Y+ L+D L 
Sbjct: 96  ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALL 155

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
              K      +   M  +G   N FTY+ L+K   ++ +   A +++ +M+   C  + V
Sbjct: 156 SENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAV 215

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y+ ++  LC+ GK+ +AR +  +      KP V  Y+++I G+C  G +E A+KL  EM
Sbjct: 216 TYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEM 270

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             ++    P+V +Y+ ++N+LC   N+  +  L   M  RGCD ++ T            
Sbjct: 271 --MDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT------------ 316

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                       L    F R +      + ++M+Q    P    +  ++  LC    ++ 
Sbjct: 317 ---------FTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEE 367

Query: 654 AINKC 658
           A+  C
Sbjct: 368 ALQVC 372


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 256/479 (53%), Gaps = 22/479 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +   +N ++   CR G +D A +L   MPV    PD YTY  ++ GLC   R+ EA+ LL
Sbjct: 143 DVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALSLL 199

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+M   GC P+ VT+ VL+  +CK+   G+A +++D M  KGC PN VTYN +I+G+C +
Sbjct: 200 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 259

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D A   L+R+ +    P+ V+Y T++ GL    R  D   +   M E+    NE  +
Sbjct: 260 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 319

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             L+    + G  E A+++ +QM   GC  NT + + +I+ +C+ G+ D+A + L  M +
Sbjct: 320 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 379

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC+ +  +Y++++KG   + +   A E+ K+M + NC  NEV ++  I  LC+ G + +
Sbjct: 380 YGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ 439

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A M+  QM   GC+ ++V Y+++++G C  G V+ AL+LF  M C     +P+  TY  L
Sbjct: 440 ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC-----KPNTITYTTL 494

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT------ALKEKLEAPQDGTDF-- 602
           L  LC    +  + +LL  M+ + C P++VT N+ ++       + E +E  +   +   
Sbjct: 495 LTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC 554

Query: 603 ------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  N L   + K   +    +++  ++   +SP   T+  ++  L R  R++ AI
Sbjct: 555 TPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 613



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 254/490 (51%), Gaps = 10/490 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + +A  K+    +A+ +   M  +  C   + ++N ++N + +EG    A EF N 
Sbjct: 213 TYTVLLEAVCKSTGFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAREFLNR 271

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +         P+T+++  V+K +C     ++  +LF EM  +NC P+  T+  L+   C+
Sbjct: 272 L---SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              ++ A+ +L++M   GC       N++IN +CK G +  A + ++NM   GC P+ ++
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y T++ GLC     + A  LL  MV   C PNEVT+ T I  L + G       ++  M 
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E    VN   Y+ L++G   +G+ + A++L+  M    CKPNT+ Y+ L+ GLC   + D
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 505

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A E+L EM+   CA N  T++ L+  F + G   +A+E+ + M ++ C  N + Y+ L+
Sbjct: 506 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G+ +D    EA  +   ++S G  PD+V YSS+I  L     VEEA+K+F+  +  +  
Sbjct: 566 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH--IVQDLG 623

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            +P    YN +L ALCK+ N   +ID    M+  GC P+ +T    +  L  + +  ++ 
Sbjct: 624 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE-DFLKET 682

Query: 600 TDFLNELAIR 609
            D L EL  R
Sbjct: 683 RDLLRELCSR 692



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 251/509 (49%), Gaps = 54/509 (10%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M + P+  T+  +I+ +C  G V  A+ L  +M  R C+P + TY  L++ +CK     +
Sbjct: 170 MPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 229

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN------------------ 287
           A+ +LDEM+  GC P  VT+NV+ING+C+ G +  A + ++                   
Sbjct: 230 AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLK 289

Query: 288 -----------------MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
                            M  K C+PNEVT++ L+   C  G +++A+ +L++M    C  
Sbjct: 290 GLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 349

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N      +IN + K GR  D  + L +M       +   Y+T++ GL +  + EDA +L 
Sbjct: 350 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 409

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           K+M+ K C PN V ++  I  LC+ G  ++A  ++ +M  +GC  N  TY++L+ GF   
Sbjct: 410 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 469

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G+   A+E++  M    C  N + Y+ L+ GLC   +L  A  +  +ML + C P+VV +
Sbjct: 470 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 526

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + ++   C  G ++EA++L  +M  +E    P++ TYN LL+ + K  N   +++LL+ +
Sbjct: 527 NVLVSFFCQKGLMDEAIELVEQM--MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL 584

Query: 571 MDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIR------------LFKRQRT 616
           +  G  PD+VT +  +  L  ++++E        + +L +R            L KR  T
Sbjct: 585 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNT 644

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            G       M+     P   T+  +++ L
Sbjct: 645 DGAIDFFAYMVSNGCMPNELTYITLIEGL 673



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 217/430 (50%), Gaps = 9/430 (2%)

Query: 75  KLGSY--QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH 132
           +L SY  Q    ++ ++++    +  ++ +E +   M  +  +  E +F  + + + +  
Sbjct: 271 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG 330

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           +VE AI++   M     C       N V+N I ++G    A +F N   N       P+T
Sbjct: 331 MVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAFQFLN---NMGSYGCSPDT 386

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +++  V+K +CR    ++A +L +EM  +NC P+  T+ T +  LC++  +++A +L+++
Sbjct: 387 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 446

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   GC    VT+N L+NG C  G +  A +L  +M    C PN +TY TL+ GLC    
Sbjct: 447 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAER 503

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A  LL  M+   C PN VT+  +++   + G   +   ++  M E     N   Y+T
Sbjct: 504 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 563

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ G+ K+  +E+A++L   ++  G  P+ V YS++I  L R  + +EA ++   + + G
Sbjct: 564 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 623

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
               A  Y+ ++    +      A++ +  M  N C+ NE+ Y  LI GL  +  L+E R
Sbjct: 624 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 683

Query: 493 MVWTQMLSRG 502
            +  ++ SRG
Sbjct: 684 DLLRELCSRG 693



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 186/419 (44%), Gaps = 47/419 (11%)

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL---------------DRMV 324
           RAA+LVD    +G  P+      LI  LC +G    A  +L               + +V
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 325 ASKC-----------------MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           A  C                  P+  TY  II GL   GR  +   +L  M  R    + 
Sbjct: 152 AGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ L+  + K      AM++  +M  KGC PN V Y+ +I+G+CR G+ D+A E L  
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 271

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           + + G   +  +Y++++KG   + +     E++ +M + NC+ NEV + +L+   C  G 
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A  V  QM   GC  +    + +I+ +C  G V++A +  N M        PD  +Y
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY--GCSPDTISY 389

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
             +L  LC+      + +LL  M+ + C P+ VT N F+  L +K    Q  T  + +++
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ-ATMLIEQMS 448

Query: 608 -----IRLFKRQRTSGGFKI---VEVMLQKFLS----PQTSTWERVVQELCRPKRIQAA 654
                + +        GF +   V+  L+ F S    P T T+  ++  LC  +R+ AA
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAA 507



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 4/210 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+    N+    +   +L  M ++       +F  +   + +  L++EAI L   M
Sbjct: 490 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 549

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E  C   + ++N++L+ I ++     ALE  + +V+     + P+ +T++ +I  + R
Sbjct: 550 M-EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN---GVSPDIVTYSSIIGVLSR 605

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V+ AI++F  +      P    Y  ++  LCK    D A+     M  +GC P  +T
Sbjct: 606 EDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELT 665

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +  LI GL     L     L+  +  +G L
Sbjct: 666 YITLIEGLANEDFLKETRDLLRELCSRGVL 695


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/483 (31%), Positives = 250/483 (51%), Gaps = 16/483 (3%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N+ P++ ++ ++I  + + G +++A  LF+++      P    Y +L+ GLC  N  D+A
Sbjct: 5   NVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDA 64

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L  +M   GC P+PVT+NV+I+  CK G L  A  L+  M   G +P+ VTYNT++ G
Sbjct: 65  RELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDG 124

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC  G +++A+ L + M    C PN  ++ TII GL +  +     +V   ME R    +
Sbjct: 125 LCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPD 184

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + Y  LI GL K GK  +A KL+++M++ G  P+ V Y+ +I G+C     DEA E+  
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            M + GC  + FT++ L+    + GK  +A  + K M  +  V + V YS LI GLC   
Sbjct: 245 SMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           ++ +AR +   M+ R CKP VV  +++IHGLC AG ++EA ++ + M  +     PDV T
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM--VSSGQSPDVVT 362

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN-- 604
           YN L++  C+      + +LL+ M+ RG  P++VT    ++ L +    P+    F    
Sbjct: 363 YNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMK 422

Query: 605 ------------ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                        L +      +  GG K+   M+   +SP    +  +  ELC+  R  
Sbjct: 423 SSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSA 482

Query: 653 AAI 655
            A+
Sbjct: 483 RAL 485



 Score =  273 bits (698), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 153/497 (30%), Positives = 259/497 (52%), Gaps = 13/497 (2%)

Query: 71  NSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGK 130
           N +P   SY +       LI   A +G       +  ++          ++  +      
Sbjct: 5   NVSPDSWSYGI-------LIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCM 57

Query: 131 AHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
           A+  ++A  LF  M +   C  +  ++N +++   + G+   A +    ++   H   +P
Sbjct: 58  ANSFDDARELFADM-NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGH---VP 113

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + +T+N V+  +C+ G V+ A+ LF EM    C P+  ++ T++ GLC+++++D+A  + 
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+     P   ++ +LI+GL K G+L  A KL   M   G  P+ VTYN +IHG+CL 
Sbjct: 174 HEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLA 233

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             LD+A+ L   M +  C P+  T+  +I+   K G+  +  R+L  M +     +   Y
Sbjct: 234 YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTY 293

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           STLISGL    + +DA  L + M+++ CKP  V  + LI GLC+ G+  EA E+L  M++
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +G + +  TY++L+ G   +G+  +A E+  DM       N V Y+ L+ GLC+  +L E
Sbjct: 354 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE 413

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  V+ QM S GC P++  Y+++I G C+AG V+  LKLF EM+C      PD   Y  L
Sbjct: 414 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVC--AGISPDHVVYGTL 471

Query: 551 LNALCKQSNISHSIDLL 567
              LCK    + ++++L
Sbjct: 472 AAELCKSGRSARALEIL 488



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 230/448 (51%), Gaps = 4/448 (0%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI     +  F     +   M R        ++  I  A  K  ++EEA  L   M
Sbjct: 47  AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKM 106

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +++ H    V ++N+V++ + + G    AL  +N +   + +   PN  + N +I  +C+
Sbjct: 107 IEDGHVPDVV-TYNTVMDGLCKSGRVEEALLLFNEM---ERLGCTPNRRSHNTIILGLCQ 162

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A Q+F EM  R+  PD ++Y  L+DGL K  +L+EA  L   M   G  P+ VT
Sbjct: 163 QSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVT 222

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NV+I+G+C    L  A +L  +M  KGC P+  T+N LI   C +G +D+A  LL RM 
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMT 282

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+ VTY T+I+GL  + R  D   +L  M +R+        +TLI GL K G+ +
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A ++   M+  G  P+ V Y+ L+ G CR G+ + A E+L +M+  G A N  TY++L+
Sbjct: 343 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++ +  +A  ++  M  + C  N   Y+ LI G C  G++     ++ +M+  G  
Sbjct: 403 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGIS 462

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           PD V Y ++   LC +G    AL++  E
Sbjct: 463 PDHVVYGTLAAELCKSGRSARALEILRE 490



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 186/384 (48%), Gaps = 7/384 (1%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           DS  Y  LI   A +G       +  RM          ++  +      A+ ++EA+ LF
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            +M  +  C+ +  +FN +++   + G    A      + +  H   +P+ +T++ +I  
Sbjct: 244 KSMRSK-GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGH---VPDVVTYSTLISG 299

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C +  VD+A  L  +M  R C+P + T  TL+ GLCK  R+ EA  +LD M   G  P 
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+N L++G C+ G+  RA +L+ +M  +G  PN VTY  L+ GLC    L +A  +  
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFA 419

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +M +S C PN  TY  +I G    G+   G ++   M       +  +Y TL + L K G
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479

Query: 382 KAEDAMKLWKQMME--KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           ++  A+++ ++  E  +       VY   +DGL   GK + A   + +M+  G       
Sbjct: 480 RSARALEILREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPER 539

Query: 440 YSSLMKGFFESGKGHKAVEIWKDM 463
            +SL+ G  +SG+G +A  + +++
Sbjct: 540 CASLVAGLCKSGQGGEARAVLEEI 563


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 148/479 (30%), Positives = 256/479 (53%), Gaps = 22/479 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +   +N ++   CR G +D A +L   MPV    PD YTY  ++ GLC   R+ EA+ LL
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALSLL 168

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+M   GC P+ VT+ VL+  +CK+   G+A +++D M  KGC PN VTYN +I+G+C +
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D A   L+R+ +    P+ V+Y T++ GL    R  D   +   M E+    NE  +
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             L+    + G  E A+++ +QM   GC  NT + + +I+ +C+ G+ D+A + L  M +
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC+ +  +Y++++KG   + +   A E+ K+M + NC  NEV ++  I  LC+ G + +
Sbjct: 349 YGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ 408

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A M+  QM   GC+ ++V Y+++++G C  G V+ AL+LF  M C     +P+  TY  L
Sbjct: 409 ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC-----KPNTITYTTL 463

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT------ALKEKLEAPQDGTDF-- 602
           L  LC    +  + +LL  M+ + C P++VT N+ ++       + E +E  +   +   
Sbjct: 464 LTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC 523

Query: 603 ------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  N L   + K   +    +++  ++   +SP   T+  ++  L R  R++ AI
Sbjct: 524 TPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 254/490 (51%), Gaps = 10/490 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + +A  K+    +A+ +   M  +  C   + ++N ++N + +EG    A EF N 
Sbjct: 182 TYTVLLEAVCKSTGFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAREFLNR 240

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +         P+T+++  V+K +C     ++  +LF EM  +NC P+  T+  L+   C+
Sbjct: 241 L---SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 297

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              ++ A+ +L++M   GC       N++IN +CK G +  A + ++NM   GC P+ ++
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y T++ GLC     + A  LL  MV   C PNEVT+ T I  L + G       ++  M 
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E    VN   Y+ L++G   +G+ + A++L+  M    CKPNT+ Y+ L+ GLC   + D
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 474

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A E+L EM+   CA N  T++ L+  F + G   +A+E+ + M ++ C  N + Y+ L+
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G+ +D    EA  +   ++S G  PD+V YSS+I  L     VEEA+K+F+  +  +  
Sbjct: 535 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH--IVQDLG 592

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            +P    YN +L ALCK+ N   +ID    M+  GC P+ +T    +  L  + +  ++ 
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE-DFLKET 651

Query: 600 TDFLNELAIR 609
            D L EL  R
Sbjct: 652 RDLLRELCSR 661



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/509 (28%), Positives = 251/509 (49%), Gaps = 54/509 (10%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M + P+  T+  +I+ +C  G V  A+ L  +M  R C+P + TY  L++ +CK     +
Sbjct: 139 MPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 198

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD------------------- 286
           A+ +LDEM+  GC P  VT+NV+ING+C+ G +  A + ++                   
Sbjct: 199 AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLK 258

Query: 287 ----------------NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
                            M  K C+PNEVT++ L+   C  G +++A+ +L++M    C  
Sbjct: 259 GLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 318

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N      +IN + K GR  D  + L +M       +   Y+T++ GL +  + EDA +L 
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           K+M+ K C PN V ++  I  LC+ G  ++A  ++ +M  +GC  N  TY++L+ GF   
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G+   A+E++  M    C  N + Y+ L+ GLC   +L  A  +  +ML + C P+VV +
Sbjct: 439 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 495

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + ++   C  G ++EA++L  +M  +E    P++ TYN LL+ + K  N   +++LL+ +
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQM--MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGL 553

Query: 571 MDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIR------------LFKRQRT 616
           +  G  PD+VT +  +  L  ++++E        + +L +R            L KR  T
Sbjct: 554 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNT 613

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            G       M+     P   T+  +++ L
Sbjct: 614 DGAIDFFAYMVSNGCMPNELTYITLIEGL 642



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 217/430 (50%), Gaps = 9/430 (2%)

Query: 75  KLGSY--QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH 132
           +L SY  Q    ++ ++++    +  ++ +E +   M  +  +  E +F  + + + +  
Sbjct: 240 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG 299

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           +VE AI++   M     C       N V+N I ++G    A +F N   N       P+T
Sbjct: 300 MVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAFQFLN---NMGSYGCSPDT 355

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +++  V+K +CR    ++A +L +EM  +NC P+  T+ T +  LC++  +++A +L+++
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   GC    VT+N L+NG C  G +  A +L  +M    C PN +TY TL+ GLC    
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAER 472

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A  LL  M+   C PN VT+  +++   + G   +   ++  M E     N   Y+T
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ G+ K+  +E+A++L   ++  G  P+ V YS++I  L R  + +EA ++   + + G
Sbjct: 533 LLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
               A  Y+ ++    +      A++ +  M  N C+ NE+ Y  LI GL  +  L+E R
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 652

Query: 493 MVWTQMLSRG 502
            +  ++ SRG
Sbjct: 653 DLLRELCSRG 662



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 199/430 (46%), Gaps = 18/430 (4%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L   + L EA  L+D     G  P       LI  LC+ G    AA+++      G   +
Sbjct: 53  LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              YNTL+ G C  G LD A  L+  M  +   P+  TY  II GL   GR  +   +L 
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLD 169

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M  R    +   Y+ L+  + K      AM++  +M  KGC PN V Y+ +I+G+CR G
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + D+A E L  + + G   +  +Y++++KG   + +     E++ +M + NC+ NEV + 
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +L+   C  G +  A  V  QM   GC  +    + +I+ +C  G V++A +  N M   
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                PD  +Y  +L  LC+      + +LL  M+ + C P+ VT N F+  L +K    
Sbjct: 350 --GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIE 407

Query: 597 QDGTDFLNELA-----IRLFKRQRTSGGFKI---VEVMLQKFLS----PQTSTWERVVQE 644
           Q  T  + +++     + +        GF +   V+  L+ F S    P T T+  ++  
Sbjct: 408 Q-ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTG 466

Query: 645 LCRPKRIQAA 654
           LC  +R+ AA
Sbjct: 467 LCNAERLDAA 476



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 175/354 (49%), Gaps = 26/354 (7%)

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N  +  L  + +L +A  L+DR  +    P+      +I  L + GR  D ARVL + E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
               V+ + Y+TL++G  + G+ + A +L   M      P+   Y+ +I GLC  G+  E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  +L +M++ GC  +  TY+ L++   +S    +A+E+  +M    C  N V Y+V+I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G+C +G++ +AR    ++ S G +PD V+Y++++ GLC A   E+  +LF EM  +E   
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM--MEKNC 281

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P+  T+++L+   C+   +  +I +L  M   GC  +   CNI +              
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT------------ 329

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    + K+ R    F+ +  M     SP T ++  V++ LCR +R + A
Sbjct: 330 ---------ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 374



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 4/210 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+    N+    +   +L  M ++       +F  +   + +  L++EAI L   M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E  C   + ++N++L+ I ++     ALE  + +V+     + P+ +T++ +I  + R
Sbjct: 519 M-EHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSN---GVSPDIVTYSSIIGVLSR 574

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V+ AI++F  +      P    Y  ++  LCK    D A+     M  +GC P  +T
Sbjct: 575 EDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELT 634

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +  LI GL     L     L+  +  +G L
Sbjct: 635 YITLIEGLANEDFLKETRDLLRELCSRGVL 664


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 161/543 (29%), Positives = 276/543 (50%), Gaps = 37/543 (6%)

Query: 70  FNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG 129
           F++     ++Q   ST+  +I+      +   ++ +L +M+ +     E  FI I   Y 
Sbjct: 61  FSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYK 120

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +    E+A+++F+  + EF CK TV+ +N +L+ ++ E  +      Y    N K   ++
Sbjct: 121 RVGSAEQALKMFYR-IGEFGCKPTVRIYNHLLDALLSENKFQMINPLY---TNMKKDGLI 176

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT----------------- 232
           PN  T+N+++K +C+   VD A +LF EM  + C PD  TY T                 
Sbjct: 177 PNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL 236

Query: 233 -------------LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                        L+DG+CKE R++ A+ LL EM  +G  P  V+++ +IN LC +G + 
Sbjct: 237 AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVE 296

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  L   MFL+GC  N  T+  LI G  ++G L +A+ L   M+   C PN V Y T+I
Sbjct: 297 LAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLI 356

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +GL   G   +  +V   M+      N   YS LI G  K G    A + W +M+  GC+
Sbjct: 357 HGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCR 416

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN V Y+ ++D LC+    D+A  ++ +M   GC  N  T+++ +KG   +G+   A+++
Sbjct: 417 PNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKL 476

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            + M  + C+ N   Y+ L+  L    K  EA  ++ ++ +R  +P++V Y+++++G   
Sbjct: 477 LERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSR 536

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD-RGCDPD 578
           AG + EAL+LF + L     + PD  TYN +++A CKQ  +  +  L+  +   +   PD
Sbjct: 537 AGMMGEALQLFGKALV--RGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPD 594

Query: 579 LVT 581
           ++T
Sbjct: 595 IIT 597



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 227/493 (46%), Gaps = 59/493 (11%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           F  +I    R+G  + A+++F  +    C+P +  Y  L+D L  EN+      L   M+
Sbjct: 112 FICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMK 171

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT--------------- 299
            DG  P   T+N+L+  LCKN  +  A KL   M  KGC P+ VT               
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231

Query: 300 ---------------YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
                          YN LI G+C +G ++ A+ LL  M+ +   PN V+Y  IIN L  
Sbjct: 232 DARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCV 291

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G       +   M  R    N + ++ LI G F  GK  +A+ LWK M++ GC+PN V 
Sbjct: 292 SGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVA 351

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ LI GLC  G  +EA ++  +M  +GC  N  TYS L+ GF +SG    A E W  M 
Sbjct: 352 YNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMI 411

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
            + C  N V Y+ ++  LC++    +A  +  +M   GC P+ + +++ I GLC  G VE
Sbjct: 412 SHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVE 471

Query: 525 EALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            A+KL   M    CL     P++ TYN LL+AL + +    +  L   +  R   P+LVT
Sbjct: 472 WAMKLLERMQGHGCL-----PNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526

Query: 582 CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
            N  L                + E A++LF +    G             +P + T+  +
Sbjct: 527 YNTVLYGFSR--------AGMMGE-ALQLFGKALVRG------------TAPDSITYNTM 565

Query: 642 VQELCRPKRIQAA 654
           +   C+  +++ A
Sbjct: 566 IHAYCKQGKVKIA 578



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 210/471 (44%), Gaps = 46/471 (9%)

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY  +++ L +E  +D    +L +M++DG       F  +ING  + G   +A K+   +
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              GC P    YN L+  L  +        L   M     +PN  TY  ++  L K  R 
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRV 195

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED----------------------- 385
               ++ + M  +    +   Y+T++S L K GK +D                       
Sbjct: 196 DAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMC 255

Query: 386 -------AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
                  A+KL  +MM+ G  PN V YS +I+ LC  G  + A  +  +M   GC AN  
Sbjct: 256 KEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIH 315

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ L+KG F  GK ++A+++WK M ++ C  N V Y+ LIHGLC +G L EA  V  QM
Sbjct: 316 TFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQM 375

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
              GC P+V  YS +I G   +G +  A + +N M  +    +P+V TY  +++ LCK S
Sbjct: 376 QRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRM--ISHGCRPNVVTYTCMVDVLCKNS 433

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--------KEKLEAPQDGTDFL------N 604
               +  L+  M   GC P+ +T N F+  L          KL     G   L      N
Sbjct: 434 MFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYN 493

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           EL   LF+  +    F + + +  + L P   T+  V+    R   +  A+
Sbjct: 494 ELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEAL 544



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 143/305 (46%), Gaps = 28/305 (9%)

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +L  M+    +  E ++  +I+G  + G AE A+K++ ++ E GCKP   +Y+ L+D L 
Sbjct: 96  ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALL 155

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
              K      +   M  +G   N FTY+ L+K   ++ +   A +++ +M+   C  + V
Sbjct: 156 SENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAV 215

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y+ ++  LC+ GK+ +AR +  +      KP V  Y+++I G+C  G +E A+KL  EM
Sbjct: 216 TYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEM 270

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             ++    P+V +Y+ ++N+LC   N+  +  L   M  RGCD ++ T            
Sbjct: 271 --MDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT------------ 316

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                       L    F R +      + ++M+Q    P    +  ++  LC    ++ 
Sbjct: 317 ---------FTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEE 367

Query: 654 AINKC 658
           A+  C
Sbjct: 368 ALQVC 372


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  272 bits (696), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 171/588 (29%), Positives = 290/588 (49%), Gaps = 56/588 (9%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E   + + KAY K  +  +A+  F  M D F CK  V+S+N++LN  ++   + RA  F 
Sbjct: 80  EDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFS 139

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
            +    + M++ PN  T+N++IK  C+   ++ AI L   M  +N +PD+++Y TL++G+
Sbjct: 140 RYF---ESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGM 196

Query: 238 CKENRLDEAVLLLDEMQVDGC------------------------------------FPT 261
            K   L  A+ + DEM V G                                     +P 
Sbjct: 197 VKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPN 256

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+N++INGLCK G    + ++ + M       +  TY++LIHGLC  GN+D AV +  
Sbjct: 257 VVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYK 316

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            +V S  + + VT+  ++NG  + G+  +   + M M +         Y+ LI GLF+ G
Sbjct: 317 EIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENG 375

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K E+A+ +W+ + +KGC+P +  Y  LI GLC+ G+ ++A +I  E  +     +A+ YS
Sbjct: 376 KVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYS 435

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           S++ G  + G+  +A+ I   M K     +    + LI+G     KL +A   + +M  +
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK 495

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC P +V+Y+++I GLC A    EA     EML  E + +PD+ T ++L++ LC++  I 
Sbjct: 496 GCSPTIVSYNTLIKGLCKAERFSEAYSFVKEML--EKEWKPDMITCSLLMDGLCQEKKIE 553

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQDGTDFL------------NELA 607
            +++L    +D+G  PD+   NI +  L    KLE        +            N L 
Sbjct: 554 MALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLM 613

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             L+K +      +I + +L+  L P   ++   ++ LC   RI  AI
Sbjct: 614 EGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAI 661



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/470 (28%), Positives = 236/470 (50%), Gaps = 40/470 (8%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V  +N +++   + G Y +  E +  +V  K  ++ PN +T+N++I  +C+ G  D +++
Sbjct: 221 VTCYNMLIDGFFKHGDYDKGKEIWERLV--KDCSVYPNVVTYNIMINGLCKCGRFDESLE 278

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE--------------------- 252
           ++  M     E D++TY +L+ GLC+   +D AV +  E                     
Sbjct: 279 IWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFC 338

Query: 253 --------------MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
                         M  + C  T V++N+LI GL +NG++  A  + + +  KGC P   
Sbjct: 339 RAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPEST 397

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY  LIHGLC  G L+KA+ +           +   Y ++++GL K GR  +   ++  M
Sbjct: 398 TYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQM 457

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           ++R + ++ ++ + LI+G  +  K EDA+  +++M  KGC P  V Y+ LI GLC+  + 
Sbjct: 458 DKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERF 517

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA   + EM+      +  T S LM G  +  K   A+ +W+         +   Y++L
Sbjct: 518 SEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNIL 577

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           +HGLC   KL +A  +++ M    C P++V  ++++ GL      E+A ++++ +  L+ 
Sbjct: 578 MHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCI--LKD 635

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
              PD+ +YNI +  LC  S IS +I+ LN  ++RG  P  VT NI + A
Sbjct: 636 GLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRA 685



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 148/489 (30%), Positives = 231/489 (47%), Gaps = 64/489 (13%)

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ-VDGCFPTPVTFNVLINGLCKNGELGRA 281
           C+ D+    T++    K    ++A+     MQ + GC P   ++N L+N   +  E  RA
Sbjct: 78  CKEDVAL--TVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRA 135

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
                        PN  TYN LI   C K  ++KA+SLLD M +    P+  +YGT+ING
Sbjct: 136 ESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLING 195

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK-- 399
           +VK+G  +   +V   M  R    +   Y+ LI G FK G  +   ++W++++ K C   
Sbjct: 196 MVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLV-KDCSVY 254

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL---------------- 443
           PN V Y+ +I+GLC+ G+ DE+ EI   M  N    + FTYSSL                
Sbjct: 255 PNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRV 314

Query: 444 -------------------MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
                              + GF  +GK  ++ E+W  M K NC    V Y++LI GL E
Sbjct: 315 YKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYNILIKGLFE 373

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +GK+ EA  +W  +  +GC+P+   Y  +IHGLC  G + +ALK+F E    +   + D 
Sbjct: 374 NGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKE--AEDGPGKLDA 431

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDF 602
           + Y+ +++ LCK+  +  +I ++N M  RG   D   CN  +       KLE   D  +F
Sbjct: 432 YAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLE---DAINF 488

Query: 603 LNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
             E+  +               L K +R S  +  V+ ML+K   P   T   ++  LC+
Sbjct: 489 FREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQ 548

Query: 648 PKRIQAAIN 656
            K+I+ A+N
Sbjct: 549 EKKIEMALN 557



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 233/476 (48%), Gaps = 42/476 (8%)

Query: 81  LGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAI 138
           + D T Y+ LI  +   GD+   + +  R+ ++  V     ++  +     K    +E++
Sbjct: 218 VADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESL 277

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
            ++  M      ++ + +++S+++ + + G    A+  Y  IV +   +++ + +T N +
Sbjct: 278 EIWERMTKNER-EKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVES---SLVVDAVTHNAM 333

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           +   CR G +  + +L+  M   NC+  + +Y  L+ GL +  +++EA+ + + +   GC
Sbjct: 334 LNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGC 392

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P   T+ VLI+GLCKNG L +A K+           +   Y++++ GLC +G +D+A+S
Sbjct: 393 RPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAIS 452

Query: 319 LLDRM--------------------VASK---------------CMPNEVTYGTIINGLV 343
           ++++M                     ASK               C P  V+Y T+I GL 
Sbjct: 453 IVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLC 512

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K  R  +    +  M E+++  +    S L+ GL +E K E A+ LW+Q ++KG KP+  
Sbjct: 513 KAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDIT 572

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           +Y+ L+ GLC V K ++A ++   M  + C  N  T ++LM+G ++     KA EIW  +
Sbjct: 573 MYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCI 632

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            K+    + + Y++ I GLC   ++ +A       L+RG  P  V ++ ++    N
Sbjct: 633 LKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVN 688


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  272 bits (695), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 273/504 (54%), Gaps = 13/504 (2%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           + +V+N   + G   +A E  + +   K   +  + L  + +I+ +CR G +D A++ F+
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEM---KERGVKMDVLLHSTLIQGLCRKGRIDEALEQFK 58

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ-----VDGCFPTPVTFNVLING 271
            M    C P++ TY T+++GLCK NR+DE + L D+M+       GC P  ++++ +I+ 
Sbjct: 59  SMG-EECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDA 117

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK   + +A +    M   GC PN VTY++LI GLC    +D+A SLL ++     +P 
Sbjct: 118 LCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            + Y  ++NG  + G+  +   +L+ M+E+ F +N   ++ ++  L+K  + E A + ++
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 237

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           ++++ G KPN V Y+  + GLC+ GK DEA  IL EM+ +    +  TYSS++ GF ++G
Sbjct: 238 RLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 297

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +  KA +++  M  + C+ + V +  L+HG  E  K REA  V   M++ G  P +  Y+
Sbjct: 298 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            ++  +C A SVE AL+++++M     K QPD  TY  L+  LC+   +  + + L+ M 
Sbjct: 358 VLMDCVCGADSVESALEIYHKM--KRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVME 415

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
                P+   C+  +  L ++ E  +  +   N   + + K        +++E M+ K +
Sbjct: 416 ADNVVPNGAICHALVEVLCKQGEVDEACSVLDN--VVEICKAGEPDEAVEVIEQMVLKGV 473

Query: 632 SPQTSTWERVVQELCRPKRIQAAI 655
            P  +T+  V++ LC   R+ +AI
Sbjct: 474 RPDEATYVAVLRSLCGLDRVDSAI 497



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 216/472 (45%), Gaps = 63/472 (13%)

Query: 130 KAHLVEEAIRLFHTMVDEFH----CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           KA+ ++E + LF  M   +     C+  V S+++V++ + +     +A E++  +   + 
Sbjct: 80  KANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRM---RA 136

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           +   PN +T++ +I  +C++  VD A  L  ++   +  P    Y  +++G  ++ +  E
Sbjct: 137 VGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSE 196

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
            + LL  M+  G     + FN +++ L KN E  +A +  + +   G  PN VTYN  +H
Sbjct: 197 CLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVH 256

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM------- 358
           GLC  G +D+A  +L  MV SK  P+ +TY +II+G  K GR      V   M       
Sbjct: 257 GLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIP 316

Query: 359 -------------EERK----FHVNEYI-----------YSTLISGLFKEGKAEDAMKLW 390
                        E +K    F V+E +           Y+ L+  +      E A++++
Sbjct: 317 HPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIY 376

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-----INNGCAANAFTYSSLMK 445
            +M  K  +P+   Y+ LI  LCR  + DEA+E L  M     + NG   +A       +
Sbjct: 377 HKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQ 436

Query: 446 G--------------FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G                ++G+  +AVE+ + M       +E  Y  ++  LC   ++  A
Sbjct: 437 GEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSA 496

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKSQ 541
              + +M SRGC P +V Y+ +I   C+A   ++A ++F  M+     P++Q
Sbjct: 497 IAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQ 548



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 175/366 (47%), Gaps = 19/366 (5%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
            FN++L+ + +     +A +F+  ++ +      PN +T+N+ +  +C+ G VD A ++ 
Sbjct: 215 DFNAMLHALWKNDEQEKACQFFERLLKSGKK---PNVVTYNVAVHGLCKAGKVDEAYRIL 271

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM      PD+ TY +++DG CK  R+D+A  +   M V  C P PVTF  L++G  ++
Sbjct: 272 LEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEH 331

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            +   A ++ ++M   G +P   TYN L+  +C   +++ A+ +  +M   K  P+  TY
Sbjct: 332 KKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTY 391

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +I  L +  R  +    L  ME      N  I   L+  L K+G+ ++A  +   ++E
Sbjct: 392 APLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 451

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
                           +C+ G+PDEA E++ +M+  G   +  TY ++++      +   
Sbjct: 452 ----------------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDS 495

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+  ++ MA   C    V Y++LI   C      +A  ++  M++ G  P      ++  
Sbjct: 496 AIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSS 555

Query: 516 GLCNAG 521
            L +AG
Sbjct: 556 CLRDAG 561



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 157/317 (49%), Gaps = 46/317 (14%)

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           +Y+T+I+G  K G+ + A +L  +M E+G K + +++S LI GLCR G+ DEA E  F+ 
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALE-QFKS 59

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM-----AKNNCVYNEVCYSVLIHGLC 483
           +   C+ N  TY++++ G  ++ +  + +E++ DM     A + C  + + YS +I  LC
Sbjct: 60  MGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-- 541
           +  ++ +A   + +M + GC P+VV YSS+I GLC    V+EA  L  ++     K +  
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQL-----KGEDM 174

Query: 542 -PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P    YN ++N   +Q   S  ++LL  M ++G   +++  N  L AL +  E      
Sbjct: 175 VPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDE------ 228

Query: 601 DFLNELAIRLFKRQRTSG-----------------------GFKIVEVMLQKFLSPQTST 637
               E A + F+R   SG                        ++I+  M++  ++P   T
Sbjct: 229 ---QEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVIT 285

Query: 638 WERVVQELCRPKRIQAA 654
           +  ++   C+  R+  A
Sbjct: 286 YSSIIDGFCKAGRMDKA 302



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 134/316 (42%), Gaps = 23/316 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+   +     +G       +L  M   K      ++  I   + KA  +++A  +F  M
Sbjct: 250 TYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 309

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C     +F ++L+   +      A   +  +VNA     +P   T+N+++  VC 
Sbjct: 310 M-VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA---GFIPGLQTYNVLMDCVCG 365

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V++A++++ +M  +  +PD  TY  L+  LC+  R+DEA   LD M+ D   P    
Sbjct: 366 ADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAI 425

Query: 265 FNVLINGLCKNGELGRAAKLVDN-------------------MFLKGCLPNEVTYNTLIH 305
            + L+  LCK GE+  A  ++DN                   M LKG  P+E TY  ++ 
Sbjct: 426 CHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLR 485

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
            LC    +D A++  ++M +  C P  VTY  +I        A D  R+  +M    F  
Sbjct: 486 SLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTP 545

Query: 366 NEYIYSTLISGLFKEG 381
                 TL S L   G
Sbjct: 546 QAQTMRTLSSCLRDAG 561


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 181/630 (28%), Positives = 303/630 (48%), Gaps = 37/630 (5%)

Query: 31  PSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSD---EIFNSTPKLGSYQLGDSTFY 87
           P  R+ R   +R+A    +Q+ T     A  EQP  D    + N+      +  G   + 
Sbjct: 26  PRWRASRHGPLRAA--GQEQLLT-----ALREQPDPDAALRMLNAALARDDFAPGPEVYE 78

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
            +I+     G    +++++  MRRE   V          +Y    L ++A+ L    +  
Sbjct: 79  EIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQP 138

Query: 148 -FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
            F  +     +N +LNV++ EG   + LE     + A+   I P+ +TFN ++K +CR  
Sbjct: 139 LFGIQADTVVYNHLLNVLV-EGSKMKLLESVYSEMGAR--GIKPDVVTFNTLMKALCRAH 195

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
            V  A+ +  EM  R   PD  T+ TLM G  +E  ++ A+ +   M   GC  T VT N
Sbjct: 196 QVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVN 255

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           VLING CK G +  A   +      G  P+++TYNT ++GLC   ++  A+ ++D MV  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
              P+  TY  ++N L K G+  +   +L  M +R    +   ++TLI+ L    + E+A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           + L +Q+  KG  P+   ++ LI+ LC+VG P  A  +  EM N+GC  +  TY++L+  
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
               GK  KA+++ KDM    C  + + Y+ +I GLC+  ++ EA  V+ QM  +G   +
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            + ++++I GLC    +++A +L N+M  +    QP+  TYN +L   CKQ +I  + D+
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQM--ISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           L +M   G + D+VT    +                       L K  RT    K++  M
Sbjct: 554 LETMTANGFEVDVVTYGTLING---------------------LCKAGRTQVALKVLRGM 592

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             K + P    +  V+Q L R   I+ A++
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 270/557 (48%), Gaps = 13/557 (2%)

Query: 60  KSEQPFSDE---IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRM--RREKR 114
           + +Q F D    I N    L   Q     +  L+         K LE V   M  R  K 
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
            V+  +F  + KA  +AH V  A+ +   M           +F +++   ++EG    AL
Sbjct: 180 DVV--TFNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSIEAAL 236

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
                ++    M      +T N++I   C+LG V++A+   ++      EPD  TY T +
Sbjct: 237 RVKARML---EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 293

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +GLC+ + +  A+ ++D M  +G  P   T+N+++N LCKNG+L  A  +++ M  +GCL
Sbjct: 294 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 353

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+  T+NTLI  LC    L++A+ L  ++      P+  T+  +IN L K+G      R+
Sbjct: 354 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 413

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M+      +E  Y+TLI  L   GK   A+ L K M   GC  +T+ Y+ +IDGLC+
Sbjct: 414 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 473

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
             + +EAEE+  +M   G + NA T+++L+ G  +  K   A E+   M       N + 
Sbjct: 474 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 533

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ ++   C+ G +++A  +   M + G + DVV Y ++I+GLC AG  + ALK+   M 
Sbjct: 534 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 593

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
               +  P    YN +L +L +++NI  ++ L   M + G  PD +T  I    L     
Sbjct: 594 IKGMRPTPK--AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 651

Query: 595 APQDGTDFLNELAIRLF 611
             ++  DF+ E+  + F
Sbjct: 652 PIKEAFDFMLEMVDKGF 668


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 174/608 (28%), Positives = 291/608 (47%), Gaps = 57/608 (9%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E F S     S++    T+  +I+  A+  +   ++ +L +M+ E     E  FI +  +
Sbjct: 61  EYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGS 120

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y +A   E+A++ F+ M D F  K TVK +N +L+ ++ E  +      Y+   N K   
Sbjct: 121 YRRAGSSEQALKTFYRMQD-FRVKPTVKIYNHILDALLDENRFQMINPIYS---NMKKDG 176

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM------------- 234
           + PN  T+N+++K +C+   VD A +L  EM  + C+PD  +Y TL+             
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 235 -----------------DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
                            +G+CKE   +EA  LLDEM   G  P  +++  +IN L   G 
Sbjct: 237 ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGN 296

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +  +  ++  MF +GC PN  T+ +LI G  LKG   +A+   DRM+    +PN V Y  
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNA 356

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +++GL       D   V   ME      N   YS LI G  K G  + A ++W  M+  G
Sbjct: 357 LMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           C PN V Y+ ++D LCR    ++A  ++  M    C  N  T+++ +KG   SG+   A+
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           +++  M  + C  N   Y+ L+  L +D +  EA  +   M  RG + ++V Y+++I+G 
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C AG + EAL+L  +M+    K  PD  T NI+++A CKQ  ++ +I L++ +      P
Sbjct: 537 CCAGMLGEALELLGKMVVRGTK--PDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHP 594

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           D++     ++ +   +           E AI   +R            ML + +SP  +T
Sbjct: 595 DIIAYTSLISGICTHIGV---------EEAIVYLRR------------MLSEGISPNVAT 633

Query: 638 WERVVQEL 645
           W  +V+ L
Sbjct: 634 WNVLVRHL 641



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 224/491 (45%), Gaps = 81/491 (16%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR--NCEPDIYTY 230
           ALE++  I N+K     P  LT+ ++I+ +     +D    L ++M +   +C  D++  
Sbjct: 59  ALEYFKSIANSKSFKHTP--LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFI- 115

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +++    +    ++A+     MQ     PT   +N +++ L           +  NM  
Sbjct: 116 -SVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            G  PN  TYN L+  LC    +D A  LL  M +  C P+EV+Y T+I+ L KLG+  +
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              + MS     F  +  +Y+ LI+G+ KE   E+A +L  +MM KG  PN + Y+ +I+
Sbjct: 235 ARELAMS-----FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIIN 289

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
            L   G  + +  +L +M   GC+ N  T++SL+KGFF  G  H                
Sbjct: 290 ALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSH---------------- 333

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
                              EA   W +M+  G  P+VVAY++++HGLC+  S+ +A+ +F
Sbjct: 334 -------------------EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVF 374

Query: 531 NEM----LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV--TCNI 584
           N+M     C      P+V TY+ L++   K  ++  + ++ N M+  GC P++V  TC +
Sbjct: 375 NQMEINGCC------PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMV 428

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            +                       L +    +  + ++E M  +   P T T+   ++ 
Sbjct: 429 DV-----------------------LCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465

Query: 645 LCRPKRIQAAI 655
           LC   R+  AI
Sbjct: 466 LCGSGRVDWAI 476



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 199/422 (47%), Gaps = 38/422 (9%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V  +N+++N + +E  +  A +  + ++N     I PN +++  +I  +   G V+ ++
Sbjct: 245 SVPVYNALINGVCKEYTFEEAFQLLDEMMNK---GIDPNVISYTTIINALSDAGNVELSL 301

Query: 213 QLFREMPVRNCEPDIYT-----------------------------------YCTLMDGL 237
            +  +M  R C P+++T                                   Y  LM GL
Sbjct: 302 AVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGL 361

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           C +  L +AV + ++M+++GC P   T++ LI+G  K G+L  A+++ + M   GC PN 
Sbjct: 362 CSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNV 421

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           V Y  ++  LC     ++A  L++ M    C PN VT+ T I GL   GR     +V   
Sbjct: 422 VAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQ 481

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M       N   Y+ L+  L K+ +  +A  L K M  +G + N V Y+ +I G C  G 
Sbjct: 482 MGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGM 541

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             EA E+L +M+  G   +A T + ++  + + GK + A+++   ++      + + Y+ 
Sbjct: 542 LGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTS 601

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI G+C    + EA +   +MLS G  P+V  ++ ++  L +      A++  +    ++
Sbjct: 602 LISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSIMQ 661

Query: 538 PK 539
           PK
Sbjct: 662 PK 663


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  272 bits (695), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 174/584 (29%), Positives = 292/584 (50%), Gaps = 23/584 (3%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +L+     S  F S+  +L +++    +    +F  + +++   H +E  +++     +E
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE---NE 116

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
              K     +N  LN ++++         ++ +VN     I+ +  TFN++IK +C+   
Sbjct: 117 LGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNE---GIVLDVSTFNVLIKALCKAHQ 173

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +  AI +  EM     +PD  T+ TLM G  +E  L+ A+ +  +M   GC  T V+  V
Sbjct: 174 LRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKV 233

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L+NG CK G +  A + V  +  +G  P++VT+N+L++G C  GN++ A+ ++D M+   
Sbjct: 234 LVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKG 293

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+  TY ++I+G+ KLG       +L  M  R+   N   Y+TLIS L KE + E A 
Sbjct: 294 FDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAAT 353

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L + ++ KG  P+   ++ LI GLC     D A E+  EM N GC  + FTYS L+   
Sbjct: 354 DLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSL 413

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
               +  +A+ + K+M  + C  N V Y+ LI GLC+  ++ +A  ++ QM   G     
Sbjct: 414 CYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS 473

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V Y+++I GLC    VEEA +L ++M+      +PD FTYN LL   C+  +I  + D++
Sbjct: 474 VTYNTLIDGLCKNKRVEEASQLMDQMIM--EGLKPDKFTYNSLLTYFCRVGDIEKAGDIV 531

Query: 568 NSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQDGTDFL-----NELAIRLFKR 613
            +M   GC+PD+ T    +  L          + L + Q     L     N +   LF R
Sbjct: 532 QTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMR 591

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR-PKRIQAAIN 656
           +RT  G ++   M++K   P   T + V + LC     IQ AI+
Sbjct: 592 KRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAID 635



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 162/533 (30%), Positives = 256/533 (48%), Gaps = 41/533 (7%)

Query: 83  DSTFYSL-IQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D+ FY++ +         K +EM+  +M  E  V+   +F  + KA  KAH +  AI + 
Sbjct: 122 DTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILML 181

Query: 142 HTMVDE----------------------------------FHCKRTVKSFNSVLNVIIQE 167
             M +                                   + C  T  S   ++N   +E
Sbjct: 182 EEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKE 241

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           G    AL F   ++        P+ +TFN ++   CR+G V++A+ +   M  +  +PD+
Sbjct: 242 GRVEEALRF---VLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDV 298

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
           YTY +L+ G+CK    ++A+ +L +M +  C P  VT+N LI+ LCK  E+  A  L   
Sbjct: 299 YTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARI 358

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           +  KG LP+  T+NTLI GLCL  N D A+ + + M    C P+E TY  +I+ L    R
Sbjct: 359 LVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERR 418

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +   +L  ME      N  +Y+TLI GL K  + EDA +++ QM   G   ++V Y+ 
Sbjct: 419 LKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNT 478

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LIDGLC+  + +EA +++ +MI  G   + FTY+SL+  F   G   KA +I + MA N 
Sbjct: 479 LIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNG 538

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  +   Y  LI GLC  G++  A  +   +  +G      AY+ +I  L      +E +
Sbjct: 539 CEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGM 598

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSN-ISHSIDLLNSMMDRGCDPDL 579
           +LF EM  +E    PD  T+ I+   LC     I  +ID    M+++G  P+ 
Sbjct: 599 RLFREM--MEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEF 649



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 151/491 (30%), Positives = 249/491 (50%), Gaps = 7/491 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +L+Q +   GD      +  +M     ++   S   +   + K   VEEA+R    +
Sbjct: 195 TFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEV 254

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +E      V +FNS++N   + G  + AL+  + ++        P+  T+N +I  +C+
Sbjct: 255 SEEGFSPDQV-TFNSLVNGFCRIGNVNDALDIVDFMIEK---GFDPDVYTYNSLISGMCK 310

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           LG  + AI++ ++M +R C P+  TY TL+  LCKEN ++ A  L   +   G  P   T
Sbjct: 311 LGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCT 370

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI GLC +     A ++ + M  KGC P+E TY+ LI  LC +  L +A+ LL  M 
Sbjct: 371 FNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEME 430

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +S C  N V Y T+I+GL K  R  D   +   ME      +   Y+TLI GL K  + E
Sbjct: 431 SSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVE 490

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +L  QM+ +G KP+   Y++L+   CRVG  ++A +I+  M +NGC  + FTY +L+
Sbjct: 491 EASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLI 550

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G   +G+   A ++ + +     V     Y+ +I  L    + +E   ++ +M+ +   
Sbjct: 551 GGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDP 610

Query: 505 PDVVAYSSMIHGLCNAGS-VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           PD + +  +  GLCN G  ++EA+    EML  E    P+  ++  L   LC  S     
Sbjct: 611 PDALTHKIVFRGLCNGGGPIQEAIDFTVEML--EKGILPEFPSFGFLAEGLCSLSMEDTL 668

Query: 564 IDLLNSMMDRG 574
           I+L+N +M++ 
Sbjct: 669 IELINMVMEKA 679



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 210/449 (46%), Gaps = 87/449 (19%)

Query: 85  TFYSLIQHYANSGDFK-SLEMVLYRMRR--EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF SL+  +   G+   +L++V + + +  +  V    S I      G+    E+AI + 
Sbjct: 265 TFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGE---FEKAIEIL 321

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M+    C     ++N++++ + +E     A +    +V+     +LP+  TFN +I+ 
Sbjct: 322 QQMILR-ECSPNTVTYNTLISALCKENEIEAATDLARILVSK---GLLPDVCTFNTLIQG 377

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP- 260
           +C     D A+++F EM  + C+PD +TY  L+D LC E RL EA++LL EM+  GC   
Sbjct: 378 LCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARN 437

Query: 261 ----------------------------------TPVTFNVLINGLCKNGELGRAAKLVD 286
                                             + VT+N LI+GLCKN  +  A++L+D
Sbjct: 438 AVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMD 497

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M ++G  P++ TYN+L+   C  G+++KA  ++  M ++ C P+  TYGT+I GL + G
Sbjct: 498 QMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAG 557

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK---------- 396
           R    +++L S++ +   +  + Y+ +I  LF   + ++ M+L+++MMEK          
Sbjct: 558 RVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHK 617

Query: 397 --------------------------GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
                                     G  P    +  L +GLC +      E+ L E+IN
Sbjct: 618 IVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLS----MEDTLIELIN 673

Query: 431 NGC--AANAFTYSSLMKGFFESGKGHKAV 457
                A  +   +S+++GF +  K + A+
Sbjct: 674 MVMEKAQMSERETSMIRGFLKIRKFNDAL 702


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 181/630 (28%), Positives = 303/630 (48%), Gaps = 37/630 (5%)

Query: 31  PSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSD---EIFNSTPKLGSYQLGDSTFY 87
           P  R+ R   +R+A    +Q+ T     A  EQP  D    + N+      +  G   + 
Sbjct: 26  PRWRASRHGPLRAA--GQEQLLT-----ALREQPDPDAALRMLNAALARDDFAPGPEVYE 78

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
            +I+     G    +++++  MRRE   V          +Y    L ++A+ L    +  
Sbjct: 79  EIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQP 138

Query: 148 -FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
            F  +     +N +LNV++ EG   + LE     + A+   I P+ +TFN ++K +CR  
Sbjct: 139 LFGIQADTVVYNHLLNVLV-EGSKMKLLESVYSEMGAR--GIKPDVVTFNTLMKALCRAH 195

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
            V  A+ +  EM  R   PD  T+ TLM G  +E  ++ A+ +   M   GC  T VT N
Sbjct: 196 QVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVN 255

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           VLING CK G +  A   +      G  P+++TYNT ++GLC   ++  A+ ++D MV  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
              P+  TY  ++N L K G+  +   +L  M +R    +   ++TLI+ L    + E+A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           + L +Q+  KG  P+   ++ LI+ LC+VG P  A  +  EM N+GC  +  TY++L+  
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
               GK  KA+++ KDM    C  + + Y+ +I GLC+  ++ EA  V+ QM  +G   +
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            + ++++I GLC    +++A +L N+M  +    QP+  TYN +L   CKQ +I  + D+
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFELINQM--ISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           L +M   G + D+VT    +                       L K  RT    K++  M
Sbjct: 554 LETMTANGFEVDVVTYGTLING---------------------LCKAGRTQVALKVLRGM 592

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             K + P    +  V+Q L R   I+ A++
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 163/560 (29%), Positives = 273/560 (48%), Gaps = 19/560 (3%)

Query: 60  KSEQPFSDE---IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRM--RREKR 114
           + +Q F D    I N    L   Q     +  L+         K LE V   M  R  K 
Sbjct: 120 EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 179

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK---SFNSVLNVIIQEGLYH 171
            V+  +F  + KA  +AH V  A+     M++E   +       +F +++   ++EG   
Sbjct: 180 DVV--TFNTLMKALCRAHQVRTAV----IMLEEMSSRGVAPDETTFTTLMQGFVEEGSIE 233

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            AL     ++    M      +T N++I   C+LG V++A+   ++      EPD  TY 
Sbjct: 234 AALRVKARML---EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYN 290

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           T ++GLC+ + +  A+ ++D M  +G  P   T+N+++N LCKNG+L  A  +++ M  +
Sbjct: 291 TFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           GCLP+  T+NTLI  LC    L++A+ L  ++      P+  T+  +IN L K+G     
Sbjct: 351 GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLA 410

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            R+   M+      +E  Y+TLI  L   GK   A+ L K M   GC  +T+ Y+ +IDG
Sbjct: 411 LRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDG 470

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC+  + +EAEE+  +M   G + NA T+++L+ G  +  K   A E+   M       N
Sbjct: 471 LCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPN 530

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + Y+ ++   C+ G +++A  +   M + G + DVV Y ++I+GLC AG  + ALK+  
Sbjct: 531 NITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLR 590

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            M     +  P    YN +L +L +++NI  ++ L   M + G  PD +T  I    L  
Sbjct: 591 GMRIKGMRPTPK--AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCR 648

Query: 592 KLEAPQDGTDFLNELAIRLF 611
                ++  DF+ E+  + F
Sbjct: 649 GGGPIKEAFDFMLEMVDKGF 668


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 179/575 (31%), Positives = 289/575 (50%), Gaps = 13/575 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI   +  G  +  E++L ++ +        ++  +   + +   ++ A  +F  M
Sbjct: 242 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 301

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V E  C     ++++++N +  EG    AL+    ++      I P   T+ L I  +C 
Sbjct: 302 VKE-GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK---GIEPTVYTYTLPITALCA 357

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +   + AI+L   M  R C P++ TY  L+ GL +  +L+ A+ L  +M  +G  P  VT
Sbjct: 358 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 417

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LIN LC  G    A K+   M   G L N  TYN +I GLCL G+++KA+ L ++M+
Sbjct: 418 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 477

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P  VTY T+ING +  G   + AR+L  M+E     +E+ Y+ L+SG  K GK E
Sbjct: 478 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 537

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A   +++M+E G  PN V Y+ LIDG  + GK D A  +L  M   GC  N  +Y++++
Sbjct: 538 SASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVI 597

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  +  +  +A +I   MA+   + N + Y+ LI GLC +G+ + A  ++  M  R C 
Sbjct: 598 NGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 657

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHS 563
           P++  YSS+I+GLC  G  +EA  L  EM   E K   PD  T+  L++       I H+
Sbjct: 658 PNLYTYSSLIYGLCQEGKADEAEILLKEM---ERKGLAPDEVTFTSLIDGFVVLGRIDHA 714

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
             LL  M+D GC P+  T ++ L  L+++    ++     +E A+  F        F+IV
Sbjct: 715 FLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHE-AVYSFSPHEKDVNFEIV 773

Query: 624 EVMLQKF----LSPQTSTWERVVQELCRPKRIQAA 654
             +L +       P   T+  +V  LCR  R   A
Sbjct: 774 SNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEA 808



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 174/552 (31%), Positives = 271/552 (49%), Gaps = 44/552 (7%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +E AI L+H M+ E     TV ++N+++N +   G +  AL+ ++ +   +    L NT 
Sbjct: 396 LEVAIGLYHKMLKEGLVPNTV-TYNALINELCVGGRFSTALKIFHWM---EGHGSLANTQ 451

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +IK +C  G ++ A+ LF +M      P + TY TL++G   +  ++ A  LLD M
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           + +GC P   T+N L++G  K G+L  A+     M   G  PN V+Y TLI G    G +
Sbjct: 512 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKV 571

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A+SLL+RM    C PN  +Y  +INGL K  R  +  ++   M E+    N   Y+TL
Sbjct: 572 DIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I GL + G+ + A K++  M ++ C PN   YS+LI GLC+ GK DEAE +L EM   G 
Sbjct: 632 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A +  T++SL+ GF   G+   A  + + M    C  N   YSVL+ GL ++  L E ++
Sbjct: 692 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKV 751

Query: 494 --------------------VWTQMLSR----GCKPDVVAYSSMIHGLCNAGSVEEALKL 529
                               + + +L+R    GC+P +  YS+++ GLC  G   EA +L
Sbjct: 752 AVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQL 811

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             +M   E    PD   Y  LL A CK   + H++ + +S+  +G    L      + AL
Sbjct: 812 VKDMK--ERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICAL 869

Query: 590 --KEKLEAPQDGTDFLNE------------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
               ++E  Q   D + E            L   L K        K++ +M  K  +P  
Sbjct: 870 CKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNI 929

Query: 636 STWERVVQELCR 647
            T+  + +EL R
Sbjct: 930 QTYVILGRELSR 941



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 161/573 (28%), Positives = 266/573 (46%), Gaps = 60/573 (10%)

Query: 125 FKAYGKAHLV------EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY-------- 170
            KA+  A +V      E  I+ F+ +      K  +  F S+LN ++++ ++        
Sbjct: 115 LKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRI 174

Query: 171 ------------HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
                        R  +F N I     M    +  + N ++  + +  +V+ A  L+++M
Sbjct: 175 LMIKACRNEEEIRRVADFLNEISG---MGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM 231

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                +P + T+ TL++ L K+ ++ EA L+L ++      P   T+  LI G C+N  L
Sbjct: 232 LNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL 291

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A  + D M  +GC PN VTY+TLI+GLC +G +D+A+ +L+ M+     P   TY   
Sbjct: 292 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 351

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I  L  +    +   ++  M++R    N   Y+ LISGL + GK E A+ L+ +M+++G 
Sbjct: 352 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 411

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PNTV Y+ALI+ LC  G+   A +I   M  +G  AN  TY+ ++KG    G   KA+ 
Sbjct: 412 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 471

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +++ M K   +   V Y+ LI+G    G +  A  +   M   GC+PD   Y+ ++ G  
Sbjct: 472 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 531

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E A   F EM  +E    P+  +Y  L++   K   +  ++ LL  M + GC+P+
Sbjct: 532 KWGKLESASFYFQEM--VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPN 589

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
           + + N  +  L                      K  R S   KI + M ++ L P   T+
Sbjct: 590 VESYNAVINGLS---------------------KENRFSEAEKICDKMAEQGLLPNVITY 628

Query: 639 ERVVQELCRPKRIQAAIN--------KCWSNLY 663
             ++  LCR  R Q A          KC  NLY
Sbjct: 629 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 238/506 (47%), Gaps = 35/506 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I+     GD +   ++  +M +   +    ++  +   Y     V  A RL   M
Sbjct: 452 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 511

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E  C+    ++N +++   + G    A  ++  +V      + PN +++  +I    +
Sbjct: 512 -KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC---GLNPNPVSYTTLIDGHSK 567

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD A+ L   M    C P++ +Y  +++GL KENR  EA  + D+M   G  P  +T
Sbjct: 568 DGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVIT 627

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+GLC+NG    A K+  +M  + CLPN  TY++LI+GLC +G  D+A  LL  M 
Sbjct: 628 YTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEME 687

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG--- 381
                P+EVT+ ++I+G V LGR      +L  M +     N   YS L+ GL KE    
Sbjct: 688 RKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLL 747

Query: 382 ---------------------KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                                  E    L  +M E GC+P    YS L+ GLCR G+  E
Sbjct: 748 EEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYE 807

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           AE+++ +M   G   +   Y SL+    ++ +   A++I+  +       +   Y  LI 
Sbjct: 808 AEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALIC 867

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC+ G++ EA+ ++  ML +    D + ++ ++ GL   G ++  +KL + M   E K+
Sbjct: 868 ALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIM---ESKN 924

Query: 541 -QPDVFTYNILLNALCKQSNISHSID 565
             P++ TY IL   L   S I  SI+
Sbjct: 925 FTPNIQTYVILGREL---SRIGKSIE 947



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 193/396 (48%), Gaps = 28/396 (7%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +   + K   V+ A+ L   M +E  C   V+S+N+V+N + +E  +  A +  + 
Sbjct: 557 SYTTLIDGHSKDGKVDIALSLLERM-EEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 615

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +       +LPN +T+  +I  +CR G    A ++F +M  R C P++YTY +L+ GLC+
Sbjct: 616 MA---EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ 672

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E + DEA +LL EM+  G  P  VTF  LI+G    G +  A  L+  M   GC PN  T
Sbjct: 673 EGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRT 732

Query: 300 YNTLIHGL---CL---------------------KGNLDKAVSLLDRMVASKCMPNEVTY 335
           Y+ L+ GL   CL                       N +   +LL RM    C P   TY
Sbjct: 733 YSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTY 792

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++GL + GR  +  +++  M+ER F  +  IY +L+    K  + + A+K++  +  
Sbjct: 793 STLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEA 852

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KG + +  +Y ALI  LC+ G+ +EA+ +   M+     A+   ++ L+ G  + G+   
Sbjct: 853 KGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDL 912

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
            +++   M   N   N   Y +L   L   GK  E+
Sbjct: 913 CMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIES 948



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 147/312 (47%), Gaps = 28/312 (8%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A ++FH M ++  C   + +++S++  + QEG   +A E    +   +   + P+ +TF 
Sbjct: 644 AFKIFHDM-EKRKCLPNLYTYSSLIYGLCQEG---KADEAEILLKEMERKGLAPDEVTFT 699

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL--------DEAVL 248
            +I     LG +D+A  L R M    C+P+  TY  L+ GL KE  L         EAV 
Sbjct: 700 SLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVY 759

Query: 249 ----------------LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
                           LL  M   GC PT  T++ L++GLC+ G    A +LV +M  +G
Sbjct: 760 SFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERG 819

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+   Y +L+   C    +D A+ +   + A     +   Y  +I  L K G+  +  
Sbjct: 820 FCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQ 879

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +  +M E++++ +E +++ L+ GL KEG+ +  MKL   M  K   PN   Y  L   L
Sbjct: 880 ALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGREL 939

Query: 413 CRVGKPDEAEEI 424
            R+GK  E+E +
Sbjct: 940 SRIGKSIESEPL 951


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 174/608 (28%), Positives = 291/608 (47%), Gaps = 57/608 (9%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E F S     S++    T+  +I+  A+  +   ++ +L +M+ E     E  FI +  +
Sbjct: 61  EYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGS 120

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y +A   E+A++ F+ M D F  K TVK +N +L+ ++ E  +      Y+   N K   
Sbjct: 121 YRRAGSSEQALKTFYRMQD-FRVKPTVKIYNHILDALLDENRFQMINPIYS---NMKKDG 176

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM------------- 234
           + PN  T+N+++K +C+   VD A +L  EM  + C+PD  +Y TL+             
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 235 -----------------DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
                            +G+CKE   +EA  LLDEM   G  P  +++  +IN L   G 
Sbjct: 237 ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGN 296

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +  +  ++  MF +GC PN  T+ +LI G  LKG   +A+   DRM+    +PN V Y  
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNA 356

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +++GL       D   V   ME      N   YS LI G  K G  + A ++W  M+  G
Sbjct: 357 LMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG 416

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           C PN V Y+ ++D LCR    ++A  ++  M    C  N  T+++ +KG   SG+   A+
Sbjct: 417 CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAI 476

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           +++  M  + C  N   Y+ L+  L +D +  EA  +   M  RG + ++V Y+++I+G 
Sbjct: 477 KVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGY 536

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C AG + EAL+L  +M+    K  PD  T NI+++A CKQ  ++ +I L++ +      P
Sbjct: 537 CCAGMLGEALELLGKMVVRGTK--PDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHP 594

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           D++     ++ +   +           E AI   +R            ML + +SP  +T
Sbjct: 595 DIIAYTSLISGICTHIGV---------EEAIVYLRR------------MLSEGISPNVAT 633

Query: 638 WERVVQEL 645
           W  +V+ L
Sbjct: 634 WNVLVRHL 641



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 130/491 (26%), Positives = 224/491 (45%), Gaps = 81/491 (16%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR--NCEPDIYTY 230
           ALE++  I N+K     P  LT+ ++I+ +     +D    L ++M +   +C  D++  
Sbjct: 59  ALEYFKSIANSKSFKHTP--LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFI- 115

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +++    +    ++A+     MQ     PT   +N +++ L           +  NM  
Sbjct: 116 -SVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            G  PN  TYN L+  LC    +D A  LL  M +  C P+EV+Y T+I+ L KLG+  +
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              + MS     F  +  +Y+ LI+G+ KE   E+A +L  +MM KG  PN + Y+ +I+
Sbjct: 235 ARELAMS-----FTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIIN 289

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
            L   G  + +  +L +M   GC+ N  T++SL+KGFF  G  H                
Sbjct: 290 ALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSH---------------- 333

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
                              EA   W +M+  G  P+VVAY++++HGLC+  S+ +A+ +F
Sbjct: 334 -------------------EALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVF 374

Query: 531 NEM----LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV--TCNI 584
           N+M     C      P+V TY+ L++   K  ++  + ++ N M+  GC P++V  TC +
Sbjct: 375 NQMEINGCC------PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMV 428

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            +                       L +    +  + ++E M  +   P T T+   ++ 
Sbjct: 429 DV-----------------------LCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKG 465

Query: 645 LCRPKRIQAAI 655
           LC   R+  AI
Sbjct: 466 LCGSGRVDWAI 476



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 165/372 (44%), Gaps = 40/372 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  I  A   A  VE ++ +   M     C   + +F S++     +G  H AL+F++ 
Sbjct: 283 SYTTIINALSDAGNVELSLAVLAKMFAR-GCSPNLHTFTSLIKGFFLKGGSHEALDFWDR 341

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG--- 236
           ++      ++PN + +N ++  +C    + +A+ +F +M +  C P++ TY  L+DG   
Sbjct: 342 MIRE---GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAK 398

Query: 237 --------------------------------LCKENRLDEAVLLLDEMQVDGCFPTPVT 264
                                           LC+ +  ++A  L++ MQV+ C P  VT
Sbjct: 399 AGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN  I GLC +G +  A K+ D M   GC PN  TYN L+  L       +A  L+  M 
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 N VTY TII G    G   +   +L  M  R    +    + +I    K+GK  
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A++L  ++      P+ + Y++LI G+C     +EA   L  M++ G + N  T++ L+
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638

Query: 445 KGFFESGKGHKA 456
           +  F S  GH  
Sbjct: 639 RHLF-SNMGHSG 649



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 4/193 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+ AI++F  M +   C     ++N +L+ ++++    R  E +  + + +H  I  N +
Sbjct: 472 VDWAIKVFDQMGNS-GCFPNTTTYNELLDSLLKD---RRFGEAFGLVKDMEHRGIELNLV 527

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +I   C  G++  A++L  +M VR  +PD  T   ++D  CK+ +++ A+ L+D +
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRL 587

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  + +  LI+G+C +  +  A   +  M  +G  PN  T+N L+  L      
Sbjct: 588 SAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGH 647

Query: 314 DKAVSLLDRMVAS 326
             AV  LD ++ S
Sbjct: 648 SGAVQFLDAVLGS 660



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++      G+   ALE    +V        P+ +T N+VI   C+ G V+ AIQL 
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVR---GTKPDAITVNIVIDAYCKQGKVNIAIQLM 584

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             +      PDI  Y +L+ G+C    ++EA++ L  M  +G  P   T+NVL+  L  N
Sbjct: 585 DRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644

Query: 276 GELGRAAKLVDNMFLKG 292
                A + +D +   G
Sbjct: 645 MGHSGAVQFLDAVLGSG 661


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  271 bits (694), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 181/630 (28%), Positives = 302/630 (47%), Gaps = 37/630 (5%)

Query: 31  PSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSD---EIFNSTPKLGSYQLGDSTFY 87
           P  R+ R   +R+A    +Q+ T     A  EQP  D    + N+      +  G   + 
Sbjct: 26  PRWRASRHGPLRAA--GQEQLLT-----ALREQPDPDAALRMLNAALARDDFAPGPEVYE 78

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
            +I+     G    +++++  MRRE   V          +Y    L ++A+ L    +  
Sbjct: 79  EIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQP 138

Query: 148 -FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
            F  +     +N +LNV++ EG   + LE     + A+   I P+ +TFN ++K +CR  
Sbjct: 139 LFGIQADTVVYNHLLNVLV-EGSKMKLLESVYSEMGAR--GIKPDVVTFNTLMKALCRAH 195

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
            V  A+ +  EM  R   PD  T+ TLM G  +E  ++ A+ +   M   GC  T VT N
Sbjct: 196 QVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVN 255

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           VLING CK G +  A   +      G  P+++TYNT ++GLC   ++  A+ ++D MV  
Sbjct: 256 VLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQE 315

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
              P+  TY  ++N L K G+  +   +L  M +R    +   ++TLI+ L    + E+A
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEA 375

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           + L +Q+  KG  P+   ++ LI+ LC+VG P  A  +  EM N+GC  +  TY++L+  
Sbjct: 376 LDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDN 435

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
               GK  KA+++ KDM    C  + + Y+ +I GLC+  ++ EA  V+ QM  +G   +
Sbjct: 436 LCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRN 495

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            + ++++I GLC    +++A  L N+M  +    QP+  TYN +L   CKQ +I  + D+
Sbjct: 496 AITFNTLIDGLCKDKKIDDAFGLINQM--ISEGLQPNNITYNSILTHYCKQGDIKKAADI 553

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           L +M   G + D+VT    +                       L K  RT    K++  M
Sbjct: 554 LETMTANGFEVDVVTYGTLING---------------------LCKAGRTQVALKVLRGM 592

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             K + P    +  V+Q L R   I+ A++
Sbjct: 593 RIKGMRPTPKAYNPVLQSLFRRNNIRDALS 622



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 143/454 (31%), Positives = 233/454 (51%), Gaps = 7/454 (1%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           ++TF +L+Q +   G  ++   V  RM        + +   +   Y K   VE+A+    
Sbjct: 216 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 275

Query: 143 T-MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             + D F   +   ++N+ +N + Q      AL+  + +V   H    P+  T+N+V+  
Sbjct: 276 QEIADGFEPDQI--TYNTFVNGLCQNDHVGHALKVMDVMVQEGHD---PDVFTYNIVVNC 330

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+ G ++ A  +  +M  R C PDI T+ TL+  LC  NRL+EA+ L  ++ V G  P 
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             TFN+LIN LCK G+   A +L + M   GC P+EVTYNTLI  LC  G L KA+ LL 
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M ++ C  + +TY TII+GL K  R  +   V   M+ +    N   ++TLI GL K+ 
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K +DA  L  QM+ +G +PN + Y++++   C+ G   +A +IL  M  NG   +  TY 
Sbjct: 511 KIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ G  ++G+   A+++ + M           Y+ ++  L     +R+A  ++ +M   
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630

Query: 502 GCKPDVVAYSSMIHGLCNAGS-VEEALKLFNEML 534
           G  PD + Y  +  GLC  G  ++EA     EM+
Sbjct: 631 GEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMV 664


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  271 bits (692), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 147/479 (30%), Positives = 255/479 (53%), Gaps = 22/479 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +   +N ++   CR G +D A +L   MPV    PD YTY  ++ GLC   R+ EA+ LL
Sbjct: 112 DVFAYNTLVAGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALSLL 168

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+M   GC P+ VT+ VL+  +CK+   G+A +++D M  KGC PN VTYN +I+G+C +
Sbjct: 169 DDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCRE 228

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D A   L+R+ +    P+ V+Y T++ GL    R  D   +   M E+    NE  +
Sbjct: 229 GRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTF 288

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             L+    + G  E A+++ +QM   GC  NT + + +I+ +C+ G+ D+A + L  M +
Sbjct: 289 DMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGS 348

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC+ +  +Y++++KG   + +   A E+ K+M + NC  NEV ++  I  LC+ G + +
Sbjct: 349 YGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQ 408

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A M+  QM   GC+ ++V Y+++++G C  G V+ AL+LF  M C     +P+  TY  L
Sbjct: 409 ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPC-----KPNTITYTTL 463

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT------ALKEKLEAPQDGTDF-- 602
           L  LC    +  + +LL  M+ + C P++VT N+ ++       + E +E  +   +   
Sbjct: 464 LTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGC 523

Query: 603 ------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  N L   +     +    +++  ++   +SP   T+  ++  L R  R++ AI
Sbjct: 524 TPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAI 582



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 253/490 (51%), Gaps = 10/490 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + +A  K+    +A+ +   M  +  C   + ++N ++N + +EG    A EF N 
Sbjct: 182 TYTVLLEAVCKSTGFGQAMEVLDEMRAK-GCTPNIVTYNVIINGMCREGRVDDAREFLNR 240

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +         P+T+++  V+K +C     ++  +LF EM  +NC P+  T+  L+   C+
Sbjct: 241 L---SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 297

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              ++ A+ +L++M   GC       N++IN +CK G +  A + ++NM   GC P+ ++
Sbjct: 298 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y T++ GLC     + A  LL  MV   C PNEVT+ T I  L + G       ++  M 
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E    VN   Y+ L++G   +G+ + A++L+  M    CKPNT+ Y+ L+ GLC   + D
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 474

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A E+L EM+   CA N  T++ L+  F + G   +A+E+ + M ++ C  N + Y+ L+
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G+  D    EA  +   ++S G  PD+V YSS+I  L     VEEA+K+F+  +  +  
Sbjct: 535 DGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFH--IVQDLG 592

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            +P    YN +L ALCK+ N   +ID    M+  GC P+ +T    +  L  + +  ++ 
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE-DFLKET 651

Query: 600 TDFLNELAIR 609
            D L EL  R
Sbjct: 652 RDLLRELCSR 661



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/509 (27%), Positives = 250/509 (49%), Gaps = 54/509 (10%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M + P+  T+  +I+ +C  G V  A+ L  +M  R C+P + TY  L++ +CK     +
Sbjct: 139 MPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQ 198

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD------------------- 286
           A+ +LDEM+  GC P  VT+NV+ING+C+ G +  A + ++                   
Sbjct: 199 AMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLK 258

Query: 287 ----------------NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
                            M  K C+PNEVT++ L+   C  G +++A+ +L++M    C  
Sbjct: 259 GLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAA 318

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N      +IN + K GR  D  + L +M       +   Y+T++ GL +  + EDA +L 
Sbjct: 319 NTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELL 378

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           K+M+ K C PN V ++  I  LC+ G  ++A  ++ +M  +GC  N  TY++L+ GF   
Sbjct: 379 KEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQ 438

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G+   A+E++  M    C  N + Y+ L+ GLC   +L  A  +  +ML + C P+VV +
Sbjct: 439 GRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTF 495

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + ++   C  G ++EA++L  +M  +E    P++ TYN LL+ +    N   +++LL+ +
Sbjct: 496 NVLVSFFCQKGLMDEAIELVEQM--MEHGCTPNLITYNTLLDGITNDCNSEEALELLHGL 553

Query: 571 MDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIR------------LFKRQRT 616
           +  G  PD+VT +  +  L  ++++E        + +L +R            L KR  T
Sbjct: 554 VSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNT 613

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            G       M+     P   T+  +++ L
Sbjct: 614 DGAIDFFAYMVSNGCMPNELTYITLIEGL 642



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 216/430 (50%), Gaps = 9/430 (2%)

Query: 75  KLGSY--QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH 132
           +L SY  Q    ++ ++++    +  ++ +E +   M  +  +  E +F  + + + +  
Sbjct: 240 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGG 299

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           +VE AI++   M     C       N V+N I ++G    A +F N   N       P+T
Sbjct: 300 MVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAFQFLN---NMGSYGCSPDT 355

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +++  V+K +CR    ++A +L +EM  +NC P+  T+ T +  LC++  +++A +L+++
Sbjct: 356 ISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQ 415

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   GC    VT+N L+NG C  G +  A +L  +M    C PN +TY TL+ GLC    
Sbjct: 416 MSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAER 472

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A  LL  M+   C PN VT+  +++   + G   +   ++  M E     N   Y+T
Sbjct: 473 LDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNT 532

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ G+  +  +E+A++L   ++  G  P+ V YS++I  L R  + +EA ++   + + G
Sbjct: 533 LLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLG 592

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
               A  Y+ ++    +      A++ +  M  N C+ NE+ Y  LI GL  +  L+E R
Sbjct: 593 MRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETR 652

Query: 493 MVWTQMLSRG 502
            +  ++ SRG
Sbjct: 653 DLLRELCSRG 662



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/430 (28%), Positives = 199/430 (46%), Gaps = 18/430 (4%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L   + L EA  L+D     G  P       LI  LC+ G    AA+++      G   +
Sbjct: 53  LIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVD 112

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              YNTL+ G C  G LD A  L+  M  +   P+  TY  II GL   GR  +   +L 
Sbjct: 113 VFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLD 169

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M  R    +   Y+ L+  + K      AM++  +M  KGC PN V Y+ +I+G+CR G
Sbjct: 170 DMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREG 229

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + D+A E L  + + G   +  +Y++++KG   + +     E++ +M + NC+ NEV + 
Sbjct: 230 RVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFD 289

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +L+   C  G +  A  V  QM   GC  +    + +I+ +C  G V++A +  N M   
Sbjct: 290 MLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSY 349

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                PD  +Y  +L  LC+      + +LL  M+ + C P+ VT N F+  L +K    
Sbjct: 350 --GCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIE 407

Query: 597 QDGTDFLNELA-----IRLFKRQRTSGGFKI---VEVMLQKFLS----PQTSTWERVVQE 644
           Q  T  + +++     + +        GF +   V+  L+ F S    P T T+  ++  
Sbjct: 408 Q-ATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTG 466

Query: 645 LCRPKRIQAA 654
           LC  +R+ AA
Sbjct: 467 LCNAERLDAA 476



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 175/354 (49%), Gaps = 26/354 (7%)

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N  +  L  + +L +A  L+DR  +    P+      +I  L + GR  D ARVL + E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
               V+ + Y+TL++G  + G+ + A +L   M      P+   Y+ +I GLC  G+  E
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  +L +M++ GC  +  TY+ L++   +S    +A+E+  +M    C  N V Y+V+I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G+C +G++ +AR    ++ S G +PD V+Y++++ GLC A   E+  +LF EM  +E   
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM--MEKNC 281

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P+  T+++L+   C+   +  +I +L  M   GC  +   CNI +              
Sbjct: 282 MPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINT------------ 329

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    + K+ R    F+ +  M     SP T ++  V++ LCR +R + A
Sbjct: 330 ---------ICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDA 374



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 94/210 (44%), Gaps = 4/210 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+    N+    +   +L  M ++       +F  +   + +  L++EAI L   M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E  C   + ++N++L+ I  +     ALE  + +V+     + P+ +T++ +I  + R
Sbjct: 519 M-EHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSN---GVSPDIVTYSSIIGVLSR 574

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V+ AI++F  +      P    Y  ++  LCK    D A+     M  +GC P  +T
Sbjct: 575 EDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELT 634

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +  LI GL     L     L+  +  +G L
Sbjct: 635 YITLIEGLANEDFLKETRDLLRELCSRGVL 664


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 161/537 (29%), Positives = 276/537 (51%), Gaps = 64/537 (11%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++L+ +   G    A   Y  ++ A +    P+ +T+N ++   C++G +D A+++F
Sbjct: 87  TYNALLSGLCNGGRMSDAQALYERMIKAGYS---PDVVTYNTLLHGFCKVGKLDEALKIF 143

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                R   PD+ TY  L++G CK ++LDEA  +L  M  +   P  VT+N L+NGLCKN
Sbjct: 144 DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKN 203

Query: 276 G------------------------------ELGR---AAKLVDNMFLKGCLPNEVTYNT 302
           G                              EL R   A +L++ M L GC P+ V+YN 
Sbjct: 204 GRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNA 263

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LIHGL  +  + +A+ L   ++     P   TY  +I+GL+K  R  +   +   + +  
Sbjct: 264 LIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHG 323

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              +   Y+  I GL K G+ EDA+ + K M EKGC P+ V ++A+I+GLC+  + DEAE
Sbjct: 324 LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAE 383

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +L  M   GC+ NA ++++L+ G   +GK  KA+  +K+M K       V Y++L+ GL
Sbjct: 384 VLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGL 443

Query: 483 C---EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           C   ++G+++EA  ++  M+ +G  PDVV YS++I GL  AG +++A +L   M   E K
Sbjct: 444 CKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM---EAK 500

Query: 540 S-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              P+V+TYN L++ LC    +  +++L  +M+++GC PD +T    ++A          
Sbjct: 501 GCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISA---------- 550

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                      L K++       + +  L+  + P +  +  ++  LC   R+  A+
Sbjct: 551 -----------LCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEAL 596



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/568 (28%), Positives = 282/568 (49%), Gaps = 99/568 (17%)

Query: 179 HIVNAKHMNIL-PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDG 236
           H V  K + I  P+  T  ++++++ + G ++ A +   ++ V+  C  DI T+   + G
Sbjct: 2   HTVYDKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC--DISTFNIYISG 59

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC+ +R+ +A  + D M+  G +P  +T+N L++GLC  G +  A  L + M   G  P+
Sbjct: 60  LCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPD 119

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLD----------------------------------- 321
            VTYNTL+HG C  G LD+A+ + D                                   
Sbjct: 120 VVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQ 179

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE- 380
           RMV+   +P+ VTY +++NGL K GR VD AR+L+   ++ F  N   YSTLISGL +E 
Sbjct: 180 RMVSESLVPDVVTYNSLVNGLCKNGR-VDEARMLIV--DKGFSPNVITYSTLISGLCREL 236

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSA--------------------------------- 407
            + E A +L ++M+  GCKP+ V Y+A                                 
Sbjct: 237 RRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTY 296

Query: 408 --LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
             LIDGL +  + +EA E+   ++ +G   +A TY+  + G  ++G+   A+ + KDM +
Sbjct: 297 NILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDE 356

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
             CV + V ++ +I+GLC++ ++ EA ++ + M ++GC P+ ++++++I G C AG  ++
Sbjct: 357 KGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKK 416

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCK---QSNISHSIDLLNSMMDRGCDPDLVTC 582
           A+  F EM  L+   +P V TYNIL++ LCK   +  I  +I L ++M+++G  PD+VT 
Sbjct: 417 AMTTFKEM--LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 474

Query: 583 NIFLTALKEKLEAPQDGTDFL---------------NELAIRLFKRQRTSGGFKIVEVML 627
           +  +  L  K     D    L               N L   L    +     ++   M+
Sbjct: 475 SALIDGLG-KAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMV 533

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +K   P T T+  ++  LC+ + +  A+
Sbjct: 534 EKGCVPDTITYGTIISALCKQEMVDKAL 561



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/450 (33%), Positives = 237/450 (52%), Gaps = 15/450 (3%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   + KA  ++EA R+   MV E      V ++NS++N + + G   R  E    IV+ 
Sbjct: 161 LINGFCKADKLDEAQRILQRMVSESLVPDVV-TYNSLVNGLCKNG---RVDEARMLIVDK 216

Query: 184 KHMNILPNTLTFNLVIKTVCR-LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
                 PN +T++ +I  +CR L  +++A QL  +M +  C+PDI +Y  L+ GL +E  
Sbjct: 217 ---GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQG 273

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           + EA+ L   +   G  P   T+N+LI+GL K   +  A +L   +   G  P+ +TY  
Sbjct: 274 VSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 333

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEER 361
            I GLC  G ++ A+ +L  M    C+P+ V++  +INGL K  R VD A VL+S ME +
Sbjct: 334 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKR-VDEAEVLLSGMEAK 392

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV---GKP 418
               N   ++TLI G  + GK + AM  +K+M+++G KP  V Y+ L+DGLC+    G+ 
Sbjct: 393 GCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRI 452

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA  +   MI  G   +  TYS+L+ G  ++GK   A  +   M    C+ N   Y+ L
Sbjct: 453 KEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSL 512

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I GLC   K+ EA  ++  M+ +GC PD + Y ++I  LC    V++AL LF+    LE 
Sbjct: 513 ISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDG--SLEA 570

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLN 568
              P    Y  L++ LC  + +  ++ LL 
Sbjct: 571 GVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  270 bits (691), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 255/506 (50%), Gaps = 42/506 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +    GK     EA +LF  M        TV  + +++  ++Q G   +A   Y  
Sbjct: 58  TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTV-CYTALIRELLQTGKIPQASSVYKT 116

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + +      +P+ +T + +I  + + G +  A+++F+ M  R   P+   Y  L+ GLCK
Sbjct: 117 MTS---HGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 173

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             ++D A+ +L +M+   C P  +T+NVLI+GLCK+G++  A    D M   GC P+  T
Sbjct: 174 ARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 233

Query: 300 YNTLIHGLCLKGNLD------------------------------------KAVSLLDRM 323
           YN LI G C  GN D                                    +AV+L++++
Sbjct: 234 YNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKI 293

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            A+ C P   TY  ++NGL K+GR  +   +L  + +     +   Y++LI GL KE ++
Sbjct: 294 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRS 353

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +A KL+K+M  +G   +TV Y+ALI  L + GK  +A  +   M ++GC  +  T S++
Sbjct: 354 FEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTM 413

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  ++G+   AV I+K M       NEV YS LIHGLC+  K+  A  +  QM    C
Sbjct: 414 IDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 473

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PD + Y+ +I GLC +G VE A   F+EM  LE   +PDV+TYNIL++  CK  N   +
Sbjct: 474 TPDTITYNILIDGLCKSGDVEAARAFFDEM--LEAGCKPDVYTYNILISGFCKAGNTDAA 531

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
             + + M    C  ++VT    ++ L
Sbjct: 532 CGVFDDMSSSRCSANVVTYGALISGL 557



 Score =  267 bits (682), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 151/491 (30%), Positives = 257/491 (52%), Gaps = 40/491 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +EEAI L   +VD   C   V ++ S+++ + +E    R+ E Y          +  +T+
Sbjct: 37  LEEAIDLLRKIVDN-GCTPDVVTYTSLIDGLGKE---KRSFEAYKLFKEMALRGLALDTV 92

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +  +I+ + + G +  A  +++ M    C PD+ T  T++DGL K  R+  AV +   M
Sbjct: 93  CYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 152

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G  P  V ++ LI+GLCK  ++  A +++  M    C P+ +TYN LI GLC  G++
Sbjct: 153 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDV 212

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE--RKFHVNEYIYS 371
           + A +  D M+ + C P+  TY  +I+G  K G   D A   ++ E       ++ + Y+
Sbjct: 213 EAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN-TDAASHSLAQETTINGCTIDIHTYT 271

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            ++  L K  K E+A+ L +++   GC P    Y+AL++GLC++G+ +EA ++L ++++N
Sbjct: 272 AIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN 331

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           GC  +  TY+SL+ G  +  +  +A +++K+MA      + VCY+ LI  L + GK+ +A
Sbjct: 332 GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQA 391

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------ 533
             V+  M S GC PDVV  S+MI GL  AG +  A+++F  M                  
Sbjct: 392 SSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHG 451

Query: 534 LC--------LEPKSQ-------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           LC        LE  +Q       PD  TYNIL++ LCK  ++  +    + M++ GC PD
Sbjct: 452 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 511

Query: 579 LVTCNIFLTAL 589
           + T NI ++  
Sbjct: 512 VYTYNILISGF 522



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 247/490 (50%), Gaps = 7/490 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +LI+    +G       V   M     V    +   +     KA  +  A+R+F +M 
Sbjct: 94  YTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 153

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
                   V  ++++++ + +      ALE    +   K     P+T+T+N++I  +C+ 
Sbjct: 154 ARGLAPNEV-VYSALIHGLCKARKMDCALEM---LAQMKKAFCTPDTITYNVLIDGLCKS 209

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVT 264
           G V+ A   F EM    C+PD+YTY  L+ G CK    D A   L  E  ++GC     T
Sbjct: 210 GDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHT 269

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +++ L KN ++  A  L++ +   GC P   TYN L++GLC  G L++A+ LL ++V
Sbjct: 270 YTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 329

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C P+ VTY ++I+GL K  R+ +  ++   M  R   ++   Y+ LI  L + GK  
Sbjct: 330 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIP 389

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A  ++K M   GC P+ V  S +IDGL + G+   A  I   M   G A N   YS+L+
Sbjct: 390 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 449

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++ K   A+E+   M K  C  + + Y++LI GLC+ G +  AR  + +ML  GCK
Sbjct: 450 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 509

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PDV  Y+ +I G C AG+ + A  +F++M     +   +V TY  L++ LCK+  ++ + 
Sbjct: 510 PDVYTYNILISGFCKAGNTDAACGVFDDMS--SSRCSANVVTYGALISGLCKRRQLTKAS 567

Query: 565 DLLNSMMDRG 574
                M +RG
Sbjct: 568 LYFQHMKERG 577



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 155/494 (31%), Positives = 243/494 (49%), Gaps = 45/494 (9%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P   T+N ++  +C++G ++ AI L R++    C PD+ TY +L+DGL KE R  EA  L
Sbjct: 19  PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 78

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM + G     V +  LI  L + G++ +A+ +   M   GC+P+ VT +T+I GL  
Sbjct: 79  FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 138

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +  AV +   M A    PNEV Y  +I+GL K  R +D A  +++  ++ F   + I
Sbjct: 139 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK-ARKMDCALEMLAQMKKAFCTPDTI 197

Query: 370 -YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF-E 427
            Y+ LI GL K G  E A   + +M+E GCKP+   Y+ LI G C+ G  D A   L  E
Sbjct: 198 TYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQE 257

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
              NGC  +  TY++++    ++ K  +AV + + +  N C      Y+ L++GLC+ G+
Sbjct: 258 TTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGR 317

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQPD 543
           L EA  +  +++  GC PDVV Y+S+I GL       EA KLF EM    L L      D
Sbjct: 318 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLAL------D 371

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
              Y  L+  L +   I  +  +  +M   GC PD+VT +  +  L    +A + G    
Sbjct: 372 TVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS---KAGRIGA--- 425

Query: 604 NELAIRLFKRQRTSG-----------------------GFKIVEVMLQKFLSPQTSTWER 640
              A+R+FK     G                         +++  M + F +P T T+  
Sbjct: 426 ---AVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 482

Query: 641 VVQELCRPKRIQAA 654
           ++  LC+   ++AA
Sbjct: 483 LIDGLCKSGDVEAA 496



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 234/463 (50%), Gaps = 17/463 (3%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           ++ A+ L  ++    C P I TY  L++GLCK  RL+EA+ LL ++  +GC P  VT+  
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI+GL K      A KL   M L+G   + V Y  LI  L   G + +A S+   M +  
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C+P+ VT  T+I+GL K GR     R+  SME R    NE +YS LI GL K  K + A+
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           ++  QM +  C P+T+ Y+ LIDGLC+ G  + A     EM+  GC  + +TY+ L+ GF
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 448 FESGKGHKAV-EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
            ++G    A   + ++   N C  +   Y+ ++  L ++ K+ EA  +  ++ + GC P 
Sbjct: 242 CKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPT 301

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           +  Y+++++GLC  G +EEA+ L  ++  ++    PDV TY  L++ L K+     +  L
Sbjct: 302 IATYNALLNGLCKMGRLEEAIDLLRKI--VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF--------------LNELAIRLFK 612
              M  RG   D V     +  L +  + PQ  + +              L+ +   L K
Sbjct: 360 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 419

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             R     +I + M  + L+P    +  ++  LC+ +++  A+
Sbjct: 420 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 462


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 155/470 (32%), Positives = 259/470 (55%), Gaps = 9/470 (1%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE--GLYHRALEF 176
           + F   F+   +A +++EA +LF  M++ +    +V S N  ++ + ++  G+   AL+ 
Sbjct: 183 RVFDIFFQVLVEAGMLDEARKLFDKMLN-YGLLISVDSCNLFISHLSEDLDGI-KIALKV 240

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           +   V    + +  NT ++N++  ++C+LG V  A QL  +M +R C PD+ +Y T+++G
Sbjct: 241 F---VEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVING 297

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C+   L   + L++EMQ+ G  P P T+N +I  LCK G++  A +++  M  +G  P+
Sbjct: 298 YCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPD 357

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            V Y TLI G C  GN+  A  L D M   K  P+ +TY  +I GL + GR ++  ++  
Sbjct: 358 GVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFH 417

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M  ++   +E  Y+ LI G  KEGK ++A  L  QM++ G  PN V Y+AL DGLC+ G
Sbjct: 418 EMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCG 477

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + D A E+L EM   G   N +TY+SL+ G  ++G   +AV++ KDM       + V Y+
Sbjct: 478 EVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYT 537

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            L+   C+  ++  A  +  QML R  +P VV ++ +++G C +G +E+  KL   M  L
Sbjct: 538 TLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM--L 595

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           E    P+  TYN L+   C ++N+  + ++   M  +G  PD  T NI +
Sbjct: 596 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 645



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 139/436 (31%), Positives = 209/436 (47%), Gaps = 5/436 (1%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C   V S+++V+N   Q G   R L+    I   +   + PN  T+N VI  +C+ G V 
Sbjct: 284 CIPDVISYSTVINGYCQVGELQRVLKL---IEEMQIKGLKPNPYTYNGVILLLCKTGKVA 340

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
            A ++ REM      PD   Y TL+DG CK   +  A  L DEMQ     P  +T+  +I
Sbjct: 341 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 400

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
            GLC+ G +  A KL   M  K   P+EVTY  LI G C +G + +A SL ++M+     
Sbjct: 401 CGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLT 460

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PN VTY  + +GL K G       +L  M  +   +N Y Y++L++GL K G  + A+KL
Sbjct: 461 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 520

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            K M   G  P+ V Y+ L+D  C+  +   A E+L +M++        T++ LM GF  
Sbjct: 521 MKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCM 580

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           SG      ++ K M +   + N   Y+ LI   C    +R    ++  M ++G  PD   
Sbjct: 581 SGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNT 640

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ +I G C A +++EA  L  +M  +       V +YN L+    K+     + +L   
Sbjct: 641 YNILIKGHCKARNMKEAWFLHRDM--VGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQ 698

Query: 570 MMDRGCDPDLVTCNIF 585
           M   G   D    NIF
Sbjct: 699 MRREGLVADREIYNIF 714



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 225/436 (51%), Gaps = 23/436 (5%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK----G 292
           L +   LDEA  L D+M   G   +  + N+ I+ L ++ +     K+   +F++    G
Sbjct: 192 LVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLD---GIKIALKVFVEFPEVG 248

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              N  +YN + H LC  G + +A  LL +M    C+P+ ++Y T+ING  ++G      
Sbjct: 249 VCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVL 308

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           +++  M+ +    N Y Y+ +I  L K GK  +A ++ ++M+ +G  P+ V+Y+ LIDG 
Sbjct: 309 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 368

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C++G    A  +  EM     + +  TY++++ G  ++G+  +A +++ +M       +E
Sbjct: 369 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 428

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LI G C++GK++EA  +  QML  G  P++V Y+++  GLC  G V+ A +L +E
Sbjct: 429 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 488

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--- 589
           M       + +++TYN L+N LCK  NI  ++ L+  M   G  PD VT    + A    
Sbjct: 489 MC--RKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 546

Query: 590 KEKLEAPQDGTDFLN-ELAIRLFKRQRTSGGF----------KIVEVMLQKFLSPQTSTW 638
           +E + A +     L+ EL   +        GF          K+++ ML+K + P  +T+
Sbjct: 547 REMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTY 606

Query: 639 ERVVQELCRPKRIQAA 654
             ++++ C    ++A 
Sbjct: 607 NSLIKQYCIRNNMRAT 622



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 127/401 (31%), Positives = 194/401 (48%), Gaps = 4/401 (0%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA R+   M+ E      V  + ++++   + G    A   ++ +   K   I P+ +
Sbjct: 339 VAEAERVLREMISEGIAPDGV-IYTTLIDGFCKLGNVSSAYRLFDEMQKRK---ISPDFI 394

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  VI  +C+ G V  A +LF EM  +  EPD  TY  L+DG CKE ++ EA  L ++M
Sbjct: 395 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 454

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  VT+  L +GLCK GE+  A +L+  M  KG   N  TYN+L++GLC  GN+
Sbjct: 455 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 514

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+AV L+  M  +   P+ VTY T+++   K    V    +L  M +R+       ++ L
Sbjct: 515 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 574

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ++G    G  ED  KL K M+EKG  PN   Y++LI   C         EI   M   G 
Sbjct: 575 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 634

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY+ L+KG  ++    +A  + +DM           Y+ LI G  +  K  EAR 
Sbjct: 635 VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 694

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           ++ QM   G   D   Y+       + G +E  L+L +E +
Sbjct: 695 LFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAI 735



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 98/388 (25%), Positives = 156/388 (40%), Gaps = 81/388 (20%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D   Y+ LI  +   G+  S   +   M++ K      ++  +     +   V EA +LF
Sbjct: 357 DGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLF 416

Query: 142 HTMVDEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           H MV    CKR      ++ ++++   +EG    A   +N ++    M + PN +T+  +
Sbjct: 417 HEMV----CKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML---QMGLTPNIVTYTAL 469

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
              +C+ G VD A +L  EM  +  E +IYTY +L++GLCK   +D+AV L+ +M+V G 
Sbjct: 470 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGF 529

Query: 259 FP-----------------------------------TPVTFNVLINGLCKNGELGRAAK 283
            P                                   T VTFNVL+NG C +G L    K
Sbjct: 530 HPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEK 589

Query: 284 LVDNMFLKGCLPNEVTYNTLI-----------------------------------HGLC 308
           L+  M  KG +PN  TYN+LI                                    G C
Sbjct: 590 LLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHC 649

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
              N+ +A  L   MV         +Y  +I G  K  + ++   +   M       +  
Sbjct: 650 KARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADRE 709

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           IY+      + EGK E  ++L  + +EK
Sbjct: 710 IYNIFADINYDEGKMELTLELCDEAIEK 737



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 120/252 (47%), Gaps = 24/252 (9%)

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK-AVEIWKD 462
           V+      L   G  DEA ++  +M+N G   +  + +  +    E   G K A++++ +
Sbjct: 184 VFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVE 243

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
             +    +N   Y+++ H LC+ G++ EA  +  QM  RGC PDV++YS++I+G C  G 
Sbjct: 244 FPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGE 303

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           ++  LKL  EM     K  P  +TYN ++  LCK   ++ +  +L  M+  G  PD V  
Sbjct: 304 LQRVLKLIEEMQIKGLKPNP--YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV-- 359

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
            I+ T +        DG            K    S  +++ + M ++ +SP   T+  V+
Sbjct: 360 -IYTTLI--------DG----------FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVI 400

Query: 643 QELCRPKRIQAA 654
             LC+  R+  A
Sbjct: 401 CGLCQTGRVMEA 412


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 151/439 (34%), Positives = 254/439 (57%), Gaps = 16/439 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++L+ +   G    A   Y  ++ A +    P+ +T+N ++   C++G +D A+++F
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYS---PDVVTYNTLLHGFCKVGELDEALKIF 68

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                R   PD+ TY  L++G CK ++LDEA  +L  M  +   P  VT+N L+NGLCKN
Sbjct: 69  DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKN 128

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC--LKGNLDKAVSLLDRMVASKCMPNEV 333
           G +  A  L+ +   KG  PN +TY+TLI GLC  L+G + +A+ L   ++     P   
Sbjct: 129 GRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRG-VSEALKLFGSVLKQGYEPEVP 184

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+GL+K  R  +   +   + +     +   Y+  I GL K G+ EDA+ + K M
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            EKGC P+ V ++A+I+GLC+  + DEAE +L  M   GC+ NA ++++L+ G   +GK 
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLC---EDGKLREARMVWTQMLSRGCKPDVVAY 510
            KA+  +K+M K       V Y++L+ GLC   ++G+++EA  ++  M+ +G  PDVV Y
Sbjct: 305 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 364

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNS 569
           S++I GL  AG +++A +L   M   E K   P+V+TYN L++ LC    +  +++L  +
Sbjct: 365 SALIDGLGKAGKLDDARRLLGAM---EAKGCIPNVYTYNSLISGLCGLEKVDEALELFVA 421

Query: 570 MMDRGCDPDLVTCNIFLTA 588
           M+++GC PD +T    ++A
Sbjct: 422 MVEKGCVPDTITYGTIISA 440



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 146/435 (33%), Positives = 247/435 (56%), Gaps = 30/435 (6%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P+  TY  L+ GLC   R+ +A  L + M   G  P  VT+N L++G CK GEL  A K+
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
            D    +G +P+ VTYN LI+G C    LD+A  +L RMV+   +P+ VTY +++NGL K
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA-EDAMKLWKQMMEKGCKPNTV 403
            GR VD AR+L+   ++ F  N   YSTLISGL +E +   +A+KL+  ++++G +P   
Sbjct: 128 NGR-VDEARMLIV--DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y+ LIDGL +  + +EA E+   ++ +G   +A TY+  + G  ++G+   A+ + KDM
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            +  CV + V ++ +I+GLC++ ++ EA ++ + M ++GC P+ ++++++I G C AG  
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCK---QSNISHSIDLLNSMMDRGCDPDLV 580
           ++A+  F EM  L+   +P V TYNIL++ LCK   +  I  +I L ++M+++G  PD+V
Sbjct: 305 KKAMTTFKEM--LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVV 362

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
           T +  +           DG          L K  +     +++  M  K   P   T+  
Sbjct: 363 TYSALI-----------DG----------LGKAGKLDDARRLLGAMEAKGCIPNVYTYNS 401

Query: 641 VVQELCRPKRIQAAI 655
           ++  LC  +++  A+
Sbjct: 402 LISGLCGLEKVDEAL 416



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 188/365 (51%), Gaps = 13/365 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +  +      + +L RM  E  V    ++  +     K   V+EA  L   +
Sbjct: 82  TYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML---I 138

Query: 145 VDEFHCKRTVKSFNSVLNVIIQE--GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           VD+      + +++++++ + +E  G+   AL+ +  ++   +    P   T+N++I  +
Sbjct: 139 VDKGFSPNVI-TYSTLISGLCRELRGV-SEALKLFGSVLKQGYE---PEVPTYNILIDGL 193

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            +   V+ A +LF  +     EPD  TY   +DGLCK  R+++A+L+L +M   GC P  
Sbjct: 194 LKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDV 253

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V+ N +INGLCK   +  A  L+  M  KGC PN +++NTLI G C  G   KA++    
Sbjct: 254 VSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKE 313

Query: 323 MVASKCMPNEVTYGTIINGLVKL---GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           M+     P  VTY  +++GL K    GR  +   +  +M E+    +   YS LI GL K
Sbjct: 314 MLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGK 373

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            GK +DA +L   M  KGC PN   Y++LI GLC + K DEA E+   M+  GC  +  T
Sbjct: 374 AGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTIT 433

Query: 440 YSSLM 444
           Y +++
Sbjct: 434 YGTII 438


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 151/486 (31%), Positives = 255/486 (52%), Gaps = 7/486 (1%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           DS  Y  LI   A +G       +  ++          ++  +      A+  ++A  LF
Sbjct: 9   DSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M +   C  +  ++N +++   + G+   A +    ++   H   +P+ +T+N V+  
Sbjct: 69  ADM-NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGH---VPDVVTYNTVMDG 124

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+   V+ A+ LF EM    C P+  ++ T++ GLC+++++D+A  +  EM+     P 
Sbjct: 125 LCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPD 184

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             ++ +LI+GL K G+L  A KL   M   G  P+ VTYN +IHG+CL   LD+A+ L  
Sbjct: 185 SWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFK 244

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M +  C P+  T+  +I+   K G+  +  R+L  M +     +   YSTLISGL    
Sbjct: 245 SMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIA 304

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + +DA  L + M+++ CKP  V  + LI GLC+ G+  EA E+L  M+++G + +  TY+
Sbjct: 305 RVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ G   +G+  +A E+  DM       N V Y+ L+ GLC+  +L EA  V+ QM S 
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC P++  Y+++I G C+AG V+  LKLF EM+C      PD   Y  L   LCK    +
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVC--AGISPDHVVYGTLAAELCKSGRSA 482

Query: 562 HSIDLL 567
            ++++L
Sbjct: 483 RALEIL 488



 Score =  265 bits (678), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 150/500 (30%), Positives = 251/500 (50%), Gaps = 26/500 (5%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+  +++ + + G  + A   +  ++   H  + P+T+ +  +I  +C     D+A +LF
Sbjct: 12  SYGILIDGLAKAGKLNDARNLFQKLL---HSGVTPSTVAYTSLIHGLCMANSFDDARELF 68

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M  R C P   TY  ++D  CK   L+EA  L+ +M  DG  P  VT+N +++GLCK+
Sbjct: 69  ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKS 128

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +  A  L + M   GC PN  ++NT+I GLC +  +D+A  +   M A    P+  +Y
Sbjct: 129 SRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSY 188

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
           G +I+GL K G+  +  ++   M +     +   Y+ +I G+      ++A++L+K M  
Sbjct: 189 GILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRS 248

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KGC+P+   ++ LID  C+ GK DEA  +L  M ++G   +  TYS+L+ G     +   
Sbjct: 249 KGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDD 308

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A  + +DM K  C    V  + LIHGLC+ G+++EAR V   M+S G  PDVV Y++++H
Sbjct: 309 ARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVH 368

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G C AG  E A +L ++M+       P+V TY  L++ LCK + +  +  +   M   GC
Sbjct: 369 GHCRAGQTERARELLSDMVAR--GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            P+L T                        L +      +  GG K+   M+   +SP  
Sbjct: 427 APNLFT---------------------YTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 465

Query: 636 STWERVVQELCRPKRIQAAI 655
             +  +  ELC+  R   A+
Sbjct: 466 VVYGTLAAELCKSGRSARAL 485



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 154/546 (28%), Positives = 263/546 (48%), Gaps = 7/546 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI     +  F     +   M R        ++  +  A  K  ++EEA  L   M
Sbjct: 47  AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 106

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +++ H    V ++N+V++ + +      AL  +N +   + +   PN  + N +I  +C+
Sbjct: 107 IEDGHVPDVV-TYNTVMDGLCKSSRVEEALLLFNEM---ERLGCTPNRRSHNTIILGLCQ 162

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A Q+F EM  ++  PD ++Y  L+DGL K  +L+EA  L   M   G  P+ VT
Sbjct: 163 QSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVT 222

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NV+I+G+C    L  A +L  +M  KGC P+  T+N LI   C +G LD+A  LL RM 
Sbjct: 223 YNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMT 282

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+ VTY T+I+GL  + R  D   +L  M +R+        +TLI GL K G+ +
Sbjct: 283 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 342

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A ++   M+  G  P+ V Y+ L+ G CR G+ + A E+L +M+  G A N  TY++L+
Sbjct: 343 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 402

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++ +  +A  ++  M  + C  N   Y+ LI G C  G++     ++ +M+  G  
Sbjct: 403 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGIS 462

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEML-CLEPKSQPDVFTYNILLNALCKQSNISHS 563
           PD V Y ++   LC +G    AL++  E    L  ++  D   Y   ++ L +   +  +
Sbjct: 463 PDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDE-VYRFAVDGLLEAGKMEMA 521

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
           +  +  M+  G  P    C   +  L +  +  +     L E+    +  +      K V
Sbjct: 522 LGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGE-ARAVLEEIMDLAYGGKARGKAAKFV 580

Query: 624 EVMLQK 629
           E M+ K
Sbjct: 581 EEMVGK 586



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/384 (28%), Positives = 186/384 (48%), Gaps = 7/384 (1%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           DS  Y  LI   A +G       +  RM          ++  +      A+ ++EA+ LF
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELF 243

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            +M  +  C+ +  +FN +++   + G    A      + +  H   +P+ +T++ +I  
Sbjct: 244 KSMRSK-GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGH---VPDVVTYSTLISG 299

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C +  VD+A  L  +M  R C+P + T  TL+ GLCK  R+ EA  +LD M   G  P 
Sbjct: 300 LCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPD 359

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+N L++G C+ G+  RA +L+ +M  +G  PN VTY  L+ GLC    L +A  +  
Sbjct: 360 VVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFA 419

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +M +S C PN  TY  +I G    G+   G ++   M       +  +Y TL + L K G
Sbjct: 420 QMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSG 479

Query: 382 KAEDAMKLWKQMME--KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           ++  A+++ ++  E  +       VY   +DGL   GK + A   + +M+  G       
Sbjct: 480 RSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPER 539

Query: 440 YSSLMKGFFESGKGHKAVEIWKDM 463
            +SL+ G  +SG+G +A  + +++
Sbjct: 540 CASLVAGLCKSGQGGEARAVLEEI 563


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  269 bits (688), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 239/418 (57%), Gaps = 6/418 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P+ +T+N++I   C+ G ++NA+ +   M V    PD+ TY T++  LC   +L +A+ 
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +LD M    C+P  +T+ +LI   C++  +G A KL+D M  +GC P+ VTYN L++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +G LD+A+  L+ M +S C PN +T+  I+  +   GR +D  ++L  M  + F  +  
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ LI+ L ++G    A+ + ++M + GC+PN++ Y+ L+ G C+  K D A E L  M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ GC  +  TY++++    + GK   AVEI   ++   C    + Y+ +I GL + GK 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A  +  +M ++  KPD + YSS++ GL   G V+EA+K F+E   +  +  P+  T+N
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR--PNAVTFN 523

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            ++  LCK      +ID L  M++RGC P+  +  I +  L  +  A ++  + LNEL
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA-KEALELLNEL 580



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 228/450 (50%), Gaps = 42/450 (9%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +LI+ +   G  +    +L  +     V    ++  +   Y KA  +  A+    +++D 
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNAL----SVLDR 197

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
                 V ++N++L  +   G   +A+E  + ++     +  P+ +T+ ++I+  CR   
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML---QRDCYPDVITYTILIEATCRDSG 254

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC--------- 258
           V +A++L  EM  R C PD+ TY  L++G+CKE RLDEA+  L++M   GC         
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 259 --------------------------FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
                                      P+ VTFN+LIN LC+ G LGRA  +++ M   G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN ++YN L+HG C +  +D+A+  L+RMV+  C P+ VTY T++  L K G+  D  
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  +  +        Y+T+I GL K GK   A+KL  +M  K  KP+T+ YS+L+ GL
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            R GK DEA +   E    G   NA T++S+M G  +S +  +A++    M    C  NE
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
             Y++LI GL  +G  +EA  +  ++ ++G
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 234/458 (51%), Gaps = 26/458 (5%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           ++ + R G ++   +    M      PDI    TL+ G C+  +  +A  +L+ ++  G 
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  +T+NV+I+G CK GE+  A  ++D M +    P+ VTYNT++  LC  G L +A+ 
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +LDRM+   C P+ +TY  +I    +        ++L  M +R    +   Y+ L++G+ 
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           KEG+ ++A+K    M   GC+PN + ++ ++  +C  G+  +AE++L +M+  G + +  
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ L+      G   +A++I + M ++ C  N + Y+ L+HG C++ K+  A     +M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +SRGC PD+V Y++M+  LC  G VE+A+++ N++        P + TYN +++ L K  
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL--SSKGCSPVLITYNTVIDGLAKAG 463

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
               +I LL+ M  +   PD +T +  +  L  + +  +         AI+ F      G
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE---------AIKFFHEFERMG 514

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                       + P   T+  ++  LC+ ++   AI+
Sbjct: 515 ------------IRPNAVTFNSIMLGLCKSRQTDRAID 540



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 191/406 (47%), Gaps = 50/406 (12%)

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
           +V  N  +  +   G L++    L+ MV    +P+ +   T+I G  +LG+    A++L 
Sbjct: 102 DVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE 161

Query: 357 SMEERKFHVNEYIYSTLISG--------------------------------LFKEGKAE 384
            +E      +   Y+ +ISG                                L   GK +
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLK 221

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            AM++  +M+++ C P+ + Y+ LI+  CR      A ++L EM + GC  +  TY+ L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  + G+  +A++   DM  + C  N + +++++  +C  G+  +A  +   ML +G  
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P VV ++ +I+ LC  G +  A+ +  +M   +   QP+  +YN LL+  CK+  +  +I
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKM--PQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR--------------- 609
           + L  M+ RGC PD+VT N  LTAL +  +  +D  + LN+L+ +               
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKV-EDAVEILNQLSSKGCSPVLITYNTVIDG 458

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           L K  +T    K+++ M  K L P T T+  +V  L R  ++  AI
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 46/276 (16%)

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
           +  +N+  A      ++ ++    +G+  +  +  ++M  +  V + +  + LI G C  
Sbjct: 91  YSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRL 150

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------ 533
           GK R+A  +   +   G  PDV+ Y+ MI G C AG +  AL + + M            
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTI 210

Query: 534 ---LC---------------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
              LC               L+    PDV TY IL+ A C+ S + H++ LL+ M DRGC
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270

Query: 576 DPDLVTCNIFLT----------ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF----- 620
            PD+VT N+ +           A+K   + P  G    N +   +  R   S G      
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ-PNVITHNIILRSMCSTGRWMDAE 329

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           K++  ML+K  SP   T+  ++  LCR   +  AI+
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 89/171 (52%), Gaps = 4/171 (2%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A  K   VE+A+ + + +  +  C   + ++N+V++ + + G   +A++  + +   
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM--- 475

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +  ++ P+T+T++ ++  + R G VD AI+ F E       P+  T+ ++M GLCK  + 
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           D A+  L  M   GC P   ++ +LI GL   G    A +L++ +  KG +
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  269 bits (687), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 140/426 (32%), Positives = 243/426 (57%), Gaps = 7/426 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P+ +T+N++I   C+ G ++NA+ +   M V    PD+ TY T++  LC   +L +A+ 
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +LD M    C+P  +T+ +LI   C++  +G+A KL+D M  +GC P+ VTYN L++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +G LD+A+  L+ M +S C PN +T+  I+  +   GR +D  ++L  M  + F  +  
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ LI+ L ++G    A+ + ++M + GC+PN++ Y+ L+ G C+  K D A E L  M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ GC  +  TY++++    + GK   AVEI   ++   C    + Y+ +I GL + GK 
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A  +  +M ++  KPD + YSS++ GL   G V+EA+K F+E   +  +  P+  T+N
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVR--PNAVTFN 523

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            ++  LCK      +ID L  M++RGC P   +  I +  L  +  A ++  + LNEL  
Sbjct: 524 SIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMA-KEALELLNELCN 582

Query: 609 R-LFKR 613
           + L KR
Sbjct: 583 KGLMKR 588



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 238/446 (53%), Gaps = 7/446 (1%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +LI+ +   G  +    +L  +     V    ++  +   Y KA  +  A+    +++D 
Sbjct: 142 TLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNAL----SVLDR 197

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
                 V ++N++L  +   G   +A+E  + ++     +  P+ +T+ ++I+  CR   
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML---QRDCYPDVITYTILIEATCRDSG 254

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V  A++L  EM  R C PD+ TY  L++G+CKE RLDEA+  L++M   GC P  +T N+
Sbjct: 255 VGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           ++  +C  G    A KL+ +M  KG  P+ VT+N LI+ LC KG L +A+ +L++M    
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C PN ++Y  +++G  K  +       L  M  R  + +   Y+T+++ L K+GK EDA+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           ++  Q+  KGC P  + Y+ +IDGL + GK  +A ++L EM       +  TYSSL+ G 
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
              GK  +A++ + +  +     N V ++ ++ GLC+  +   A      M++RGCKP  
Sbjct: 495 SREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTE 554

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEM 533
            +Y+ +I GL   G  +EAL+L NE+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNEL 580



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 234/416 (56%), Gaps = 10/416 (2%)

Query: 162 NVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR 221
           NV+I    Y +A E  N +     M++ P+ +T+N +++++C  G +  A+++   M  R
Sbjct: 176 NVMISG--YCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQR 233

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
           +C PD+ TY  L++  C+++ + +A+ LLDEM+  GC P  VT+NVL+NG+CK G L  A
Sbjct: 234 DCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEA 293

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            K +++M   GC PN +T+N ++  +C  G    A  LL  M+     P+ VT+  +IN 
Sbjct: 294 IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353

Query: 342 LVK---LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           L +   LGRA+D   +L  M +     N   Y+ L+ G  KE K + A++  ++M+ +GC
Sbjct: 354 LCRKGLLGRAID---ILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGC 410

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ V Y+ ++  LC+ GK ++A EIL ++ + GC+    TY++++ G  ++GK  KA++
Sbjct: 411 YPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIK 470

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +  +M   +   + + YS L+ GL  +GK+ EA   + +    G +P+ V ++S++ GLC
Sbjct: 471 LLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLC 530

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
                + A+     M  +    +P   +Y IL+  L  +     +++LLN + ++G
Sbjct: 531 KTRQTDRAIDFLVYM--INRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKG 584



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 234/458 (51%), Gaps = 26/458 (5%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           ++ + R G ++   +    M      PDI    TL+ G C+  +  +A  +L+ ++  G 
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  +T+NV+I+G CK GE+  A  ++D M +    P+ VTYNT++  LC  G L +A+ 
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +LDRM+   C P+ +TY  +I    +        ++L  M +R    +   Y+ L++G+ 
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           KEG+ ++A+K    M   GC+PN + ++ ++  +C  G+  +AE++L +M+  G + +  
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ L+      G   +A++I + M K+ C  N + Y+ L+HG C++ K+  A     +M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +SRGC PD+V Y++M+  LC  G VE+A+++ N++        P + TYN +++ L K  
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL--SSKGCSPVLITYNTVIDGLAKAG 463

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
               +I LL+ M  +   PD +T +  +  L  + +  +         AI+ F      G
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE---------AIKFFHEFERMG 514

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                       + P   T+  ++  LC+ ++   AI+
Sbjct: 515 ------------VRPNAVTFNSIMLGLCKTRQTDRAID 540



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 193/408 (47%), Gaps = 54/408 (13%)

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
           +V  N  +  L   G L++    L+ MV    +P+ +   T+I G  ++G+    A++L 
Sbjct: 102 DVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILE 161

Query: 357 SMEERKFHVNEYIYSTLISG--------------------------------LFKEGKAE 384
            +E      +   Y+ +ISG                                L   GK +
Sbjct: 162 VLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLK 221

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            AM++  +M+++ C P+ + Y+ LI+  CR     +A ++L EM + GC  +  TY+ L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLV 281

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  + G+  +A++   DM  + C  N + +++++  +C  G+  +A  +   ML +G  
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILLNALCKQSNISH 562
           P VV ++ +I+ LC  G +  A+ +  +M    PK   QP+  +YN LL+  CK+  +  
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKM----PKHGCQPNSLSYNPLLHGFCKEKKMDR 397

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------- 609
           +I+ L  M+ RGC PD+VT N  LTAL +  +  +D  + LN+L+ +             
Sbjct: 398 AIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV-EDAVEILNQLSSKGCSPVLITYNTVI 456

Query: 610 --LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             L K  +T    K+++ M  K L P T T+  +V  L R  ++  AI
Sbjct: 457 DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 90/171 (52%), Gaps = 4/171 (2%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A  K   VE+A+ + + +  +  C   + ++N+V++ + + G   +A++  + +   
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM--- 475

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +  ++ P+T+T++ ++  + R G VD AI+ F E       P+  T+ ++M GLCK  + 
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQT 535

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           D A+  L  M   GC PT  ++ +LI GL   G    A +L++ +  KG +
Sbjct: 536 DRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  268 bits (686), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 172/578 (29%), Positives = 269/578 (46%), Gaps = 92/578 (15%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
            A+ L   M   F    + +S+N+VL+ + +   +  AL  Y  ++  +   + P T TF
Sbjct: 127 RALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDR---VPPTTFTF 183

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY----------------CTLMD---- 235
            +  + +CRLG   +A+ L R M    C PD   Y                 TL+D    
Sbjct: 184 GVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLL 243

Query: 236 ---------------GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN----- 275
                          GLC    + EA  L+D M + GC P+ VT+  L+ GLC+      
Sbjct: 244 MGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADE 303

Query: 276 --------------------------GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
                                     G+L RA +L + M  KGC P+  TYN L+HGLC 
Sbjct: 304 AYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G    AV +LD M    C PN VTY T+++   + G   D   +L  M  + F +N   
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG 423

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ +I  L K+GK ++AM+L ++M  +GCKP+   Y+ +I  LC   + DEAE I   ++
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G  AN  TY++L+     SG+  + + +  +M  + C  + V Y+ LI  LC++G + 
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVD 543

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            + M+  +M+++G KP+  +Y+ +I+ LC AG V +AL+L  EM  L     PD+ TYN 
Sbjct: 544 RSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEM--LNQGLTPDIVTYNT 601

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+N LCK      +++LL  + +    PD+VT NI ++    K+    D +  L+     
Sbjct: 602 LINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILIS-WHCKVRLLDDASMLLD----- 655

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
               +  SGG           + P   TW  +VQ   R
Sbjct: 656 ----KAVSGG-----------IVPNERTWGMMVQNFVR 678



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 248/499 (49%), Gaps = 22/499 (4%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
           RAL   + +   +   + P+  ++N V+ T+ R     +A+ L+R M      P  +T+ 
Sbjct: 127 RALHLLDQM--PRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFG 184

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
                LC+  R  +A+ LL  M   GC P  V +  +I+ L   G +  AA L+D M L 
Sbjct: 185 VAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLM 244

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           GC  +  T+N ++ GLC  G++ +A  L+DRM+   C P+ VTYG ++ GL +  R  D 
Sbjct: 245 GCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRT-RQADE 303

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
           A  ++    R   VN  + +T+I G   EGK   A +L++ M  KGC P+   Y+ L+ G
Sbjct: 304 AYAMLG---RVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHG 360

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC++G+   A  +L EM   GCA N  TYS+L+  F  +G    A  +   M+      N
Sbjct: 361 LCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMN 420

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y+ +I+ L +DGKL EA  +  +M S+GCKPD+  Y+++I+ LCN   ++EA  +F 
Sbjct: 421 SQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFG 480

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
            +L  E     +  TYN L++AL         + L N M+  GC  D+V+ N  + AL  
Sbjct: 481 NLL--EEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCK 538

Query: 590 -----------KEKLEAPQDGTDF-LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
                      +E +       +F  N L   L K  +     ++ + ML + L+P   T
Sbjct: 539 EGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVT 598

Query: 638 WERVVQELCRPKRIQAAIN 656
           +  ++  LC+     AA+N
Sbjct: 599 YNTLINGLCKVGWTHAALN 617



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 217/432 (50%), Gaps = 8/432 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +TF  ++      G  +    ++ RM          ++ F+ +   +    +EA  +   
Sbjct: 251 NTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGR 310

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
            V E +    V   N+V+   + EG   RA E Y  ++ +K     P+  T+N+++  +C
Sbjct: 311 -VPEVN----VVMLNTVIRGCLAEGKLARATELY-EMMGSK--GCPPDVHTYNILMHGLC 362

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +LG   +A+++  EM  + C P+I TY TL+   C+    D+A  +LD+M   G      
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N +I  L K+G+L  A +LV  M  +GC P+  TYNT+I+ LC    +D+A  +   +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +    + N +TY T+I+ L+  GR  +G R+   M      ++   Y+ LI  L KEG  
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNV 542

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + +M L ++MM KG KPN   Y+ LI+ LC+ GK  +A E+  EM+N G   +  TY++L
Sbjct: 543 DRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 602

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  + G  H A+ + + +   N   + V Y++LI   C+   L +A M+  + +S G 
Sbjct: 603 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGI 662

Query: 504 KPDVVAYSSMIH 515
            P+   +  M+ 
Sbjct: 663 VPNERTWGMMVQ 674



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 202/404 (50%), Gaps = 9/404 (2%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           G  H V EA RL   M+    C  +V ++  +L  + +     +A E Y  +     +N+
Sbjct: 262 GLGH-VREAARLVDRMM-MHGCTPSVVTYGFLLRGLCRT---RQADEAYAMLGRVPEVNV 316

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +      N VI+     G +  A +L+  M  + C PD++TY  LM GLCK  R   AV 
Sbjct: 317 V----MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVR 372

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +LDEM+  GC P  VT++ L++  C+NG    A  ++D M  KG   N   YN +I+ L 
Sbjct: 373 MLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALG 432

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G LD+A+ L+  M +  C P+  TY TII  L    +  +   +  ++ E     N  
Sbjct: 433 KDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGI 492

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+TLI  L   G+ ++ ++L  +M+  GC  + V Y+ LI  LC+ G  D +  +L EM
Sbjct: 493 TYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM 552

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +  G   N F+Y+ L+    ++GK   A+E+ K+M       + V Y+ LI+GLC+ G  
Sbjct: 553 MTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 612

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             A  +  ++ +    PD+V Y+ +I   C    +++A  L ++
Sbjct: 613 HAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDK 656



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/156 (21%), Positives = 71/156 (45%), Gaps = 4/156 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++  LI+     G+     M+L  M  +       S+  +     KA  V +A+ L   M
Sbjct: 528 SYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEM 587

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +++      V ++N+++N + + G  H AL     + N    N+ P+ +T+N++I   C+
Sbjct: 588 LNQGLTPDIV-TYNTLINGLCKVGWTHAALNLLEKLPNE---NVHPDIVTYNILISWHCK 643

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           + L+D+A  L  +       P+  T+  ++    ++
Sbjct: 644 VRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  268 bits (686), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 171/545 (31%), Positives = 276/545 (50%), Gaps = 25/545 (4%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY-HRALEFYNH 179
           F  + K+  +   V +A+ L H + +      TV S+N+VL+ +++     HR  +    
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLH-LANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193

Query: 180 IVNAKHMN-ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
           +      N + PN  T+N++I+ V   G ++  +   R+M      P++ TY TL+D  C
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K+ ++ EA+ LL  M V G     +++N +INGLC  G +    +LV+ M  KG +P+EV
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEV 313

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TYNTL++G C +GNL + + LL  MV     PN VTY T+IN + K G       +   M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             R    NE  Y+TLI G  ++G   +A K+  +M+  G  P+ V Y+AL+ G C +G+ 
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA  IL  M+  G   +  +YS+++ GF    +  KA ++ ++M +   + + V YS L
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I GLC   KL EA  ++ +M+ RG  PD V Y+S+I+  C  G + +AL+L +EM  ++ 
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEM--VQR 551

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK----EKLE 594
              PD  TY++L+N L K++    +  LL  +      PD VT N  +        + +E
Sbjct: 552 GFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVE 611

Query: 595 APQDG---TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
               G      +NE A R+FK             MLQ+   P  + +  ++    R   +
Sbjct: 612 GLVKGFCMKGLMNE-ADRVFK------------TMLQRNHKPNAAIYNLMIHGHSRGGNV 658

Query: 652 QAAIN 656
             A N
Sbjct: 659 HKAYN 663



 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 262/506 (51%), Gaps = 29/506 (5%)

Query: 125 FKAYGKAHLVEEAI----------RLFHTMVDEFHCKRTVKSFNSVLNVIIQE----GLY 170
           FK Y  AH +   +           LF  + D FH   +  S ++V +++++     G  
Sbjct: 89  FKLYRTAHSLAADLAATLPDPTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFV 148

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL-----VDNAIQLFREMPVRNCEP 225
            +AL    H+ N +H    P  L++N V+  + R         D+A ++FR+M      P
Sbjct: 149 PKALTLL-HLAN-RH-GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSP 205

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           ++YTY  ++ G+  +  L++ +  + +M+ +G  P  VT+N LI+  CK  ++  A  L+
Sbjct: 206 NVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALL 265

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M + G   N ++YN++I+GLC KG + +   L++ M     +P+EVTY T++NG  K 
Sbjct: 266 RAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKE 325

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           G    G  +L  M  +    N   Y+TLI+ + K G    A++++ QM  +G +PN   Y
Sbjct: 326 GNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTY 385

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + LIDG C+ G  +EA ++L EMI +G + +  TY++L+ G+   G+  +AV I + M +
Sbjct: 386 TTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVE 445

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                + V YS +I G C + +L +A  +  +M+ +G  PD V YSS+I GLC    + E
Sbjct: 446 RGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVE 505

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A  LF EM+       PD  TY  L+NA C    +S ++ L + M+ RG  PD VT ++ 
Sbjct: 506 AFDLFREMM--RRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVL 563

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLF 611
           +  L +K       T     L ++LF
Sbjct: 564 INGLNKKAR-----TKVAKRLLLKLF 584



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/479 (30%), Positives = 241/479 (50%), Gaps = 50/479 (10%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------------YNH 179
           ++A R+F  MV        V ++N ++  ++ +G   + L F               YN 
Sbjct: 189 DDAERVFRDMVRN-GVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNT 247

Query: 180 IVNA--------KHMNIL---------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
           +++A        + M +L          N +++N VI  +C  G +    +L  EM  + 
Sbjct: 248 LIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
             PD  TY TL++G CKE  L + ++LL EM   G  P  VT+  LIN +CK G L RA 
Sbjct: 308 LVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           ++ D M ++G  PNE TY TLI G C KG +++A  +L  M+ S   P+ VTY  +++G 
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
             LGR  +   +L  M ER    +   YST+I+G  +E +   A ++ ++M+EKG  P+T
Sbjct: 428 CFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V YS+LI GLC   K  EA ++  EM+  G   +  TY+SL+  +   G+  KA+ +  +
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDE 547

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH------- 515
           M +   + + V YSVLI+GL +  + + A+ +  ++      PD V Y+++I        
Sbjct: 548 MVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEF 607

Query: 516 --------GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
                   G C  G + EA ++F  M  L+   +P+   YN++++   +  N+  + +L
Sbjct: 608 KSVEGLVKGFCMKGLMNEADRVFKTM--LQRNHKPNAAIYNLMIHGHSRGGNVHKAYNL 664



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 225/453 (49%), Gaps = 23/453 (5%)

Query: 144 MVDEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +V+E   K  V    ++N+++N   +EG  H+ L   + +V      + PN +T+  +I 
Sbjct: 299 LVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGK---GLSPNVVTYTTLIN 355

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+ G +  A+++F +M VR   P+  TY TL+DG C++  ++EA  +L EM V G  P
Sbjct: 356 CMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSP 415

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           + VT+N L++G C  G +  A  ++  M  +G  P+ V+Y+T+I G C +  L KA  + 
Sbjct: 416 SVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMK 475

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + MV    +P+ VTY ++I GL    + V+   +   M  R    +E  Y++LI+    +
Sbjct: 476 EEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVD 535

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+   A++L  +M+++G  P+ V YS LI+GL +  +   A+ +L ++       +  TY
Sbjct: 536 GELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTY 595

Query: 441 SSLM---------------KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
           ++L+               KGF   G  ++A  ++K M + N   N   Y+++IHG    
Sbjct: 596 NTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRG 655

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G + +A  ++ ++         VA  +++  L   G  +E  +L   +  L      D  
Sbjct: 656 GNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNI--LRSCRLNDAK 713

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
              +L+    K+ N+   +++L  M   G  PD
Sbjct: 714 VAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 194/404 (48%), Gaps = 30/404 (7%)

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG-----NL 313
           F +   F++++  L + G + +A  L+      G  P  ++YN ++  L  +      + 
Sbjct: 129 FSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDY 188

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A  +   MV +   PN  TY  II G+V  G    G   +  ME+     N   Y+TL
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I    K+ K ++AM L + M   G   N + Y+++I+GLC  G+  E  E++ EM   G 
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY++L+ GF + G  H+ + +  +M       N V Y+ LI+ +C+ G L  A  
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ QM  RG +P+   Y+++I G C  G + EA K+ +EM+       P V TYN L++ 
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIV--SGFSPSVVTYNALVHG 426

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
            C    +  ++ +L  M++RG  PD+V+ +  +                        F R
Sbjct: 427 YCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAG----------------------FCR 464

Query: 614 QRTSG-GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +R  G  F++ E M++K + P T T+  ++Q LC  +++  A +
Sbjct: 465 ERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFD 508



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 186/373 (49%), Gaps = 18/373 (4%)

Query: 155 KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
           +++ ++++   Q+GL + A +  + ++ +      P+ +T+N ++   C LG V  A+ +
Sbjct: 383 RTYTTLIDGFCQKGLMNEAYKVLSEMIVS---GFSPSVVTYNALVHGYCFLGRVQEAVGI 439

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
            R M  R   PD+ +Y T++ G C+E  L +A  + +EM   G  P  VT++ LI GLC 
Sbjct: 440 LRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCL 499

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
             +L  A  L   M  +G  P+EVTY +LI+  C+ G L KA+ L D MV    +P+ VT
Sbjct: 500 QQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVT 559

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS-----------GLFK---- 379
           Y  +INGL K  R     R+L+ +   +   ++  Y+TLI            GL K    
Sbjct: 560 YSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCM 619

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           +G   +A +++K M+++  KPN  +Y+ +I G  R G   +A  +  E+ ++  A +   
Sbjct: 620 KGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVA 679

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
             +L+K     G   +   + +++ ++  + +     VL+    ++G +     V T+M 
Sbjct: 680 VIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMA 739

Query: 500 SRGCKPDVVAYSS 512
             G  PD   +SS
Sbjct: 740 KDGLLPDGGIHSS 752


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  268 bits (685), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 155/485 (31%), Positives = 252/485 (51%), Gaps = 36/485 (7%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
            A+ L   M   F    + +S+N VL+ + +   +  AL  Y  ++  +   + P T TF
Sbjct: 124 RALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDR---VPPTTFTF 180

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
            +  + +CRLG   +A+ L R M    C PD   Y T++  L  +  + EA +LLDEM +
Sbjct: 181 GVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLL 240

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            GC     TFN L+ GLC  G +  AA+LVD M  +GC+P+ VTY  L+ GLC     D+
Sbjct: 241 MGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADE 300

Query: 316 AVSLLDR------------------------------MVASK-CMPNEVTYGTIINGLVK 344
           A ++L R                              M+ SK C P+  TY  +++GL K
Sbjct: 301 ACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCK 360

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           LGR     R+L  MEE+    N   YSTL+    + G  +DA  +  QM+ KG   N+  
Sbjct: 361 LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQG 420

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ +I  LC+ GK D+A  ++ EM + GC  +  TY++++     +    +A  I++++ 
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +   V N + Y+ LIH L  +G+ +E   + ++ML  GC+ DV++Y+ +I  LC  G+V+
Sbjct: 481 EEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVD 540

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
            ++ L  EM  +    +P+ F+YN+L+N LCK   +  +++L   M+++G  PD+VT N 
Sbjct: 541 RSMALLEEM--VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNT 598

Query: 585 FLTAL 589
            +  L
Sbjct: 599 LINGL 603



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 208/425 (48%), Gaps = 10/425 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA RL   M+ +  C  +V ++  +L  + +      A      +          N +
Sbjct: 263 VREAARLVDRMMTQ-GCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV-------NVV 314

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
             N VI+     G +  A +L+  M  + C PD++TY  LM GLCK  R   AV +LDEM
Sbjct: 315 MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM 374

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  GC P  VT++ L++  C+NG    A  ++D M  KG   N   YN +I+ LC  G L
Sbjct: 375 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKL 434

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A  L+  M +  C P+  TY T+I  L       +   +  ++ E     N   Y+TL
Sbjct: 435 DQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTL 494

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I  L + G+ ++ ++L  +M+  GC+ + + Y+ LI  LC+ G  D +  +L EM+  G 
Sbjct: 495 IHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGI 554

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N F+Y+ L+    ++GK   A+E+ K+M       + V Y+ LI+GLC+ G    A  
Sbjct: 555 KPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALN 614

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  ++ +    PD+V Y+ +I   C    +++A  L ++   +     P+  T+ +++  
Sbjct: 615 LLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDK--AISGGIVPNERTWGMMVQN 672

Query: 554 LCKQS 558
             +Q+
Sbjct: 673 FVRQT 677



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 221/432 (51%), Gaps = 8/432 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +TF  L+      G  +    ++ RM  +  +    ++ F+ +   +    +EA  +   
Sbjct: 248 NTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGR 307

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           + +       V   N+V+   + EG   RA E Y  ++ +K     P+  T+++++  +C
Sbjct: 308 LPEV-----NVVMLNTVIRGCLTEGKLARATELY-EMMGSK--GCPPDVHTYSILMHGLC 359

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +LG   +A+++  EM  + C P+I TY TL+   C+    D+A  +LD+M   G      
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N +I  LCK+G+L +A +LV  M  +GC P+  TYNT+I+ LC    +++A  +   +
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +    + N +TY T+I+ L++ GR  +G R+   M      ++   Y+ LI  L KEG  
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNV 539

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + +M L ++M+ KG KPN   Y+ LI+ LC+ GK  +A E+  EM+N G   +  TY++L
Sbjct: 540 DRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 599

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  + G  H A+ + + +   N   + V Y++LI   C+   L +A M+  + +S G 
Sbjct: 600 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGI 659

Query: 504 KPDVVAYSSMIH 515
            P+   +  M+ 
Sbjct: 660 VPNERTWGMMVQ 671



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 164/378 (43%), Gaps = 49/378 (12%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI--YS 371
           D+A++LLD + AS+  P   +    +   +  GRA+     L+    R+F V+     Y+
Sbjct: 91  DRALALLDSLPASRLPPLRESLLLPLLRSLPPGRALH----LLDQMPRRFAVSPSFRSYN 146

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            ++S L +     DA+ L+++M+     P T  +      LCR+G+  +A  +L  M  +
Sbjct: 147 VVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARH 206

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           GC  +A  Y +++      G   +A  +  +M    C  +   ++ L+ GLC  G++REA
Sbjct: 207 GCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREA 266

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML-------------CL-- 536
             +  +M+++GC P VV Y  ++ GLC     +EA  +   +              CL  
Sbjct: 267 ARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCLTE 326

Query: 537 --------------EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
                              PDV TY+IL++ LCK      ++ +L+ M ++GC P++VT 
Sbjct: 327 GKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTY 386

Query: 583 NIFL-----TALKEKLEAPQD---------GTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
           +  L       + +   A  D          +   N +   L K  +     ++V+ M  
Sbjct: 387 STLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKS 446

Query: 629 KFLSPQTSTWERVVQELC 646
           +   P   T+  ++  LC
Sbjct: 447 QGCKPDICTYNTMIYHLC 464


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  268 bits (685), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 154/482 (31%), Positives = 263/482 (54%), Gaps = 18/482 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T++ +I  +C+ G V  A+++  EM  +   PD+ TY  ++D LC+  ++DEA  L
Sbjct: 8   PDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADEL 67

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             +M   GC    V +N LINGLCK+  + RA KL++ M  KG  P+ +TYNT++ GLC 
Sbjct: 68  FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCR 127

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD--GARVLMSMEERKFHVNE 367
            G + +A    D M +    P+ V Y  +++ L K G+  +  G    M M +RK   + 
Sbjct: 128 MGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDL 187

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+TLI G  +  K ++AMKL+K ++ KG  P+TV Y++++ GL R    DEAEE+  +
Sbjct: 188 ITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M+++GCA N  TYS ++ G    G   + +E++++M +     + +  + +I  LC+  K
Sbjct: 248 MVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKK 307

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + +A  V  +M   G  PDVV Y+ ++ GLC    V++A +LF+ M  ++    PD+ +Y
Sbjct: 308 VDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM--VDNGCAPDIVSY 365

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNE 605
           +++LN LCK + +  +  L + M++R   PD+VT NI +  L    KL+  +D  D ++E
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425

Query: 606 ------------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                       L   L + +RT    ++ + M++K           V+  LCR  ++  
Sbjct: 426 HNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQ 485

Query: 654 AI 655
           A+
Sbjct: 486 AL 487



 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 142/455 (31%), Positives = 241/455 (52%), Gaps = 20/455 (4%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M  +  EPD+ TY T++ GLCK  ++ EA+ +++EM   G  P   T+ ++++ LC+ G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +  A +L   M  +GC  N V YN LI+GLC   N+++A  LL+ M +    P+ +TY T
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK--QMME 395
           I++GL ++G+  +  +   SM  R +  +   Y+ L+  L+KEGK  +A  L+K   M +
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +   P+ + Y+ LIDG CRV K DEA ++  ++I  G   +  TY+S++ G        +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A E++K M  + C  N   YS+++ G C  G +     ++ +M  +   PDV+  +++I 
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVID 300

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            LC A  V++A K+  EM  +   + PDV TYNILL+ LCK + +  + +L ++M+D GC
Sbjct: 301 MLCKAKKVDDAHKVLEEMSKI--GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGF 620
            PD+V+ ++ L  L  K     D     + +  R               L K  +     
Sbjct: 359 APDIVSYSVVLNGLC-KTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +++VM +  + P   T   ++  LCR KR   A+
Sbjct: 418 DLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAV 452



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 263/547 (48%), Gaps = 45/547 (8%)

Query: 85  TFYSLIQHYANSGDF-KSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFH 142
           T+ ++I     +G   ++LEMV      EK V  +  ++  I     +A  V+EA  LFH
Sbjct: 12  TYSTIISGLCKTGKVTEALEMV--EEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFH 69

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+ E  C     ++N+++N + ++    RA +    + +  +    P+ +T+N ++  +
Sbjct: 70  KMI-ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYE---PDNITYNTILSGL 125

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIY---------------------------------- 228
           CR+G V  A Q F  MP R   PD+                                   
Sbjct: 126 CRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAP 185

Query: 229 ---TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
              TY TL+DG C+  + DEA+ L  ++   G  P  VT+N ++ GL +   +  A ++ 
Sbjct: 186 DLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMF 245

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M   GC PN  TY+ ++ G C  GN+ + + L + M   +  P+ +    +I+ L K 
Sbjct: 246 KKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKA 305

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
            +  D  +VL  M +     +   Y+ L+ GL K    + A +L+  M++ GC P+ V Y
Sbjct: 306 KKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSY 365

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           S +++GLC+  K  +A  +   MI      +  T++ LM G  ++GK  +A ++   M++
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSE 425

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
           +N + + V  + L+HGLC D +  EA  ++  M+ +G   DV+ ++ ++ GLC  G + +
Sbjct: 426 HNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQ 485

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           AL  F  M+  + +  PDV TY  L+NAL +   +  ++D    M   GC PD V  N  
Sbjct: 486 ALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTL 545

Query: 586 LTALKEK 592
           +  L+++
Sbjct: 546 MNGLRKQ 552



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 219/438 (50%), Gaps = 41/438 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA + F +M    +    V ++N +L+ + +EG    A   +  +  A    + P+ +
Sbjct: 131 VSEAKQFFDSMPSRGYSPDVV-AYNGLLDALYKEGKVAEAWGLFKTMDMADR-KVAPDLI 188

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +I   CR+   D A++LF+++  +   PD  TY +++ GL +++ +DEA  +  +M
Sbjct: 189 TYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKM 248

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGR--------------------------------- 280
              GC P   T++++++G C+ G + R                                 
Sbjct: 249 VDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKV 308

Query: 281 --AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A K+++ M   G +P+ VTYN L+ GLC    +DKA  L   MV + C P+ V+Y  +
Sbjct: 309 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 368

Query: 339 INGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +NGL K  +  D ARVL   M ERK   +   ++ L+ GL K GK ++A  L   M E  
Sbjct: 369 LNGLCKTNKVHD-ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHN 427

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P+ V  + L+ GLCR  + DEA  +   M+  G  A+   ++ ++ G    GK  +A+
Sbjct: 428 VLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQAL 487

Query: 458 EIWKDMAKNNCVYNE--VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
             +K M K++  ++   V Y+ L++ L E G++ +A   + QM   GC PD VAY+++++
Sbjct: 488 LFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMN 547

Query: 516 GLCNAGSVEEALKLFNEM 533
           GL   G   +A +L   M
Sbjct: 548 GLRKQGRHIQADRLTQAM 565



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 227/439 (51%), Gaps = 9/439 (2%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IF 125
           + F+S P  G Y      +  L+      G       +   M    R V      +  + 
Sbjct: 136 QFFDSMPSRG-YSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLI 194

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
             + +    +EA++LF  ++ + +   TV ++NS+L  + ++     A E +  +V++  
Sbjct: 195 DGFCRVEKTDEAMKLFKDVIAKGYMPDTV-TYNSILLGLARKSNMDEAEEMFKKMVDS-- 251

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
               PN  T+++V+   CR+G +   ++L+ EM  +   PD+     ++D LCK  ++D+
Sbjct: 252 -GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDD 310

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  +L+EM   G  P  VT+N+L++GLCK   + +A +L   M   GC P+ V+Y+ +++
Sbjct: 311 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 370

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC    +  A  L DRM+  K +P+ VT+  +++GL K G+  +   +L  M E     
Sbjct: 371 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLP 430

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +    +TL+ GL ++ + ++A++L++ M+EKG   + + ++ ++ GLCR GK  +A    
Sbjct: 431 DGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFF 490

Query: 426 FEMINNGC--AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
             M+ +    + +  TY++L+    E+G+  +AV+ ++ M  + C  + V Y+ L++GL 
Sbjct: 491 KSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLR 550

Query: 484 EDGKLREARMVWTQMLSRG 502
           + G+  +A  +   M  +G
Sbjct: 551 KQGRHIQADRLTQAMKEKG 569



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 168/339 (49%), Gaps = 35/339 (10%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI------------- 180
           ++EA  +F  MVD   C     +++ VL+   + G   R LE Y  +             
Sbjct: 238 MDEAEEMFKKMVDS-GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCN 296

Query: 181 -----------VNAKH--------MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR 221
                      V+  H        +  +P+ +T+N+++  +C+  LVD A +LF  M   
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
            C PDI +Y  +++GLCK N++ +A +L D M      P  VTFN+L++GLCK G+L  A
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
             L+D M     LP+ VT  TL+HGLC     D+AV L   MV    + + + +  ++ G
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAG 476

Query: 342 LVKLGRAVDGARVLMSM--EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           L + G+         SM   + +F  +   Y+TL++ L + G+ + A+  ++QM   GC 
Sbjct: 477 LCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCA 536

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           P+ V Y+ L++GL + G+  +A+ +   M   G  ++ F
Sbjct: 537 PDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/236 (34%), Positives = 128/236 (54%), Gaps = 6/236 (2%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K +LV++A  LF TMVD   C   + S++ VLN + +    H A   ++ ++  K   ++
Sbjct: 339 KTNLVDKAHELFSTMVDN-GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK---LV 394

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +TFN+++  +C+ G +D A  L   M   N  PD  T  TLM GLC++ R DEAV L
Sbjct: 395 PDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRL 454

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC--LPNEVTYNTLIHGL 307
              M   G     +  N+++ GLC+ G+L +A     +M        P+ VTY TL++ L
Sbjct: 455 FQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNAL 514

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
              G +D+AV    +M  S C P+ V Y T++NGL K GR +   R+  +M+E+ F
Sbjct: 515 IEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 108/240 (45%), Gaps = 14/240 (5%)

Query: 60  KSEQPFSDEIFNS-TPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE 118
           K+ + FS  + N   P + SY +       ++     +       ++  RM   K V   
Sbjct: 345 KAHELFSTMVDNGCAPDIVSYSV-------VLNGLCKTNKVHDARVLFDRMIERKLVPDV 397

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
            +F  +     KA  ++EA  L   M  E +      +  ++++ + ++     A+  + 
Sbjct: 398 VTFNILMDGLCKAGKLDEAKDLLDVM-SEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQ 456

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMDG 236
           ++V       + + L  N+V+  +CR G +  A+  F+ M   + E  PD+ TY TL++ 
Sbjct: 457 YMVEK---GTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNA 513

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L +  R+D+AV    +M   GC P  V +N L+NGL K G   +A +L   M  KG L +
Sbjct: 514 LIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 168/525 (32%), Positives = 277/525 (52%), Gaps = 24/525 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+  F+ MV   + + +V  F   L  I ++  Y  A+   N +       +  N  
Sbjct: 77  IDDALTSFYRMV-RMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQM---DLFGVTHNVY 132

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           + N++I  +CRL  VD A+ +  +M     +PD  T+ TL++GLC E ++ EAV L +EM
Sbjct: 133 SLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEM 192

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  +++N +INGLCKNG    A ++   M      PN VTYNT+I  LC    +
Sbjct: 193 VWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLV 252

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           ++AV  L  MV     P+ VTY TI++G   LG+  +  R+   M  R    +   ++ L
Sbjct: 253 NEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL KEG   +A  + + M EKG +PN   Y+AL+DG C   + DEA ++L  MI  GC
Sbjct: 313 VDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGC 372

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A N  +Y+ L+ G+ +S + ++A  +  +M++ N   + V YS L+ GLC+ G+ REA  
Sbjct: 373 APNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALN 432

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M S G  PD++AYS ++ G C  G ++EALKL  EM   E + +P++  Y IL+  
Sbjct: 433 LFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEM--HERRIKPNIILYTILIRG 490

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA-LKEKL---------EAPQDGTDFL 603
           +     +  + +L + +   G  PD+ T N+ +   LKE L         +   DG  FL
Sbjct: 491 MFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDG--FL 548

Query: 604 ------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                 N +     + Q +S   ++++ M+ K  S  +ST++ ++
Sbjct: 549 PDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 145/309 (46%), Gaps = 33/309 (10%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA---------------LEFYN 178
           + EA RLF  MV       TV +FN +++ + +EG+   A                  YN
Sbjct: 287 LNEATRLFKEMVGRNVMPDTV-TFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYN 345

Query: 179 HIVNA-----------KHMNIL------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR 221
            +++            K + I+      PN  ++N++I   C+   ++ A +L  EM  +
Sbjct: 346 ALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEK 405

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
           N  PD  TY TLM GLC+  R  EA+ L  EM   G  P  + +++L++G CK+G L  A
Sbjct: 406 NLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEA 465

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            KL+  M  +   PN + Y  LI G+ + G L+ A  L  ++ A    P+  TY  +I G
Sbjct: 466 LKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKG 525

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L+K G + +       ME+  F  +   Y+ +I G  +   +  A++L  +M+ K    +
Sbjct: 526 LLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSAD 585

Query: 402 TVVYSALID 410
           +  +  L+D
Sbjct: 586 SSTFQMLLD 594


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 161/566 (28%), Positives = 284/566 (50%), Gaps = 58/566 (10%)

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           ++DE  C   + +F  V+N + +E    R  E ++ +  A      P+ +T+N+ I  +C
Sbjct: 31  LLDEMPCSPDMVAFTVVINGLCRE---KRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLC 87

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +   VD+A QL ++M  + C P   TY  L+DGL K  RLDEA+ +L++M   G  PT  
Sbjct: 88  KAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLK 147

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+ V+I+GL K G +  A ++  +M   GC P+   Y  LI GL   G LD+A+  L++M
Sbjct: 148 TYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQM 207

Query: 324 VASKCM----PNEV----------------------------------TYGTIINGLVKL 345
           V + C     P+ V                                  T+  ++  L K 
Sbjct: 208 VENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKA 267

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
            R  +    +  M ER+     + Y++L+ G  K G+ ++A+   K+ +E+G  P+ V Y
Sbjct: 268 ERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTY 327

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           +++IDGLC++G+ +E  E   EM N G   +A TY++L+ GF ++    KA  +++ M +
Sbjct: 328 TSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQ 387

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
           +  V + V Y++++ GLC+ G++ EA   +  M  RGC   VV YS+++ G C+ G+V  
Sbjct: 388 SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA 447

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A++LF  M  L+   +P++ +YNI++  LC+   ++ +      ++ R   PD+ T N F
Sbjct: 448 AVELFRRM--LDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSF 505

Query: 586 LTALKEKLEAPQDGTDF------------LNELAIRLFKRQRTSG---GFKIVEVMLQKF 630
           L  L ++L+   DG +             L+  +I +    R  G     +I   M+ + 
Sbjct: 506 LHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRG 565

Query: 631 LSPQTSTWERVVQELCRPKRIQAAIN 656
           ++P    +  +++ LC   R+  A+ 
Sbjct: 566 VAPDVVVFNTLIRWLCIAGRVDEALE 591



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 162/554 (29%), Positives = 265/554 (47%), Gaps = 63/554 (11%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRV-----VLEKSF------------IFIFKAYGKA 131
           L+     S D  +  +V+  + REKR+     VLE++             +FI     KA
Sbjct: 31  LLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFI-DGLCKA 89

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
             V++A +L   M DE  C  T  ++ ++++ +++ G    A+     +V   +    P 
Sbjct: 90  ERVDDAFQLLKKM-DEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNS---PT 145

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             T+ +VI  + + G V+ A ++F +M    C PD + Y  L+ GL K  +LDEA++ L+
Sbjct: 146 LKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLN 205

Query: 252 EMQVDGCFP--------------------------------------TPVTFNVLINGLC 273
           +M  +GC                                        T  TFN L+  LC
Sbjct: 206 QMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALC 265

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K      A   V  M  + C P   TY +L+ G    G LD+A+  L   V    +P+ V
Sbjct: 266 KAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAV 325

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY +II+GL KLGR  +G      M  R +  +   Y+ LI G  K      A ++++QM
Sbjct: 326 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 385

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           ++ G   +TV Y+ ++DGLC+ G+  EA      M   GC A   TYS+LM GF   G  
Sbjct: 386 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 445

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             AVE+++ M    C  N V Y+++I GLC  GKL +A   + ++L R   PDV  ++S 
Sbjct: 446 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSF 505

Query: 514 IHGLCNA-GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +HGLC    +V + ++LF  M  +   + P++ +Y+IL++ +C+   +  ++++ + M+ 
Sbjct: 506 LHGLCQRLDTVGDGVELFESM--VSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVS 563

Query: 573 RGCDPDLVTCNIFL 586
           RG  PD+V  N  +
Sbjct: 564 RGVAPDVVVFNTLI 577



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 159/532 (29%), Positives = 260/532 (48%), Gaps = 46/532 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+     +G       +L +M  +      K++  +     KA  VEEA R+F  M
Sbjct: 113 TYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 172

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV-NAKHMNILPNTLTFNLVIKTVC 203
           +    C+     + ++++ + + G    AL + N +V N     + P+ +  NLVI+ +C
Sbjct: 173 LGN-GCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLC 231

Query: 204 RLGLVDNAIQLFRE----------------------------------MPVRNCEPDIYT 229
             G +++A+  F E                                  M  R C P ++T
Sbjct: 232 ASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFT 291

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y +L+DG  K  RLDEA+L L E    G  P  VT+  +I+GLCK G +    +    M 
Sbjct: 292 YTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMR 351

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            +G  P+ VTY  LI G      + KA  +  +M+ S  + + VTY  I++GL K GR  
Sbjct: 352 NRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVA 411

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +     ++MEER        YS L+ G   EG    A++L+++M+++GC+PN V Y+ +I
Sbjct: 412 EAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIII 471

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES----GKGHKAVEIWKDMAK 465
            GLCR GK  +A     +++      + +T++S + G  +     G G   VE+++ M  
Sbjct: 472 RGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDG---VELFESMVS 528

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                N   YS+L+ G+C  G L     ++ +M+SRG  PDVV ++++I  LC AG V+E
Sbjct: 529 QGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDE 588

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           AL++F E   LE +S PD ++Y  LL+AL +   +  +  L   M  +GC P
Sbjct: 589 ALEVFRE---LERRSAPDAWSYWSLLDALSRCERMEEARLLSFHMKLQGCAP 637



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 266/556 (47%), Gaps = 93/556 (16%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           L +T     ++  +C+ G +D A+ L  EMP   C PD+  +  +++GLC+E RLDEA  
Sbjct: 6   LVDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFS 62

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L+     GC P  VT+NV I+GLCK   +  A +L+  M  K CLP  VTY  L+ GL 
Sbjct: 63  VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLL 122

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G LD+A+++L++MV     P   TY  +I+GL K GR  +  R+ + M       + +
Sbjct: 123 KAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAF 182

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGC----KPNTVV-------------------- 404
           +Y+ LISGL K GK ++A+    QM+E GC    +P+ V+                    
Sbjct: 183 VYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAY 242

Query: 405 --------------YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
                         ++ L+  LC+  + +EA   + +M    C    FTY+SL+ GF + 
Sbjct: 243 FDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G+  +A+   K+  +   + + V Y+ +I GLC+ G++ E    + +M +RG +PD V Y
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK-------------- 556
           +++I G   A  + +A +++ +M  L+  +     TYNI+L+ LCK              
Sbjct: 363 AALIDGFMKAKMIPKAHRVYRQM--LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM 420

Query: 557 ---------------------QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL------ 589
                                + N+S +++L   M+DRGC+P+LV+ NI +  L      
Sbjct: 421 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 480

Query: 590 ------KEKLEAPQDGTDF--LNELAIRLFKRQRTSG-GFKIVEVMLQKFLSPQTSTWER 640
                  EKL   +   D    N     L +R  T G G ++ E M+ +  SP   ++  
Sbjct: 481 AKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSI 540

Query: 641 VVQELCRPKRIQAAIN 656
           ++  +CR   ++  + 
Sbjct: 541 LMDGICRAGGLEVTLE 556


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 183/673 (27%), Positives = 317/673 (47%), Gaps = 91/673 (13%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFK 126
           EIFNS  K   ++    T+  +I+     G+F+++E VL   R      +LE  +I   +
Sbjct: 25  EIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMR 84

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
            YG+   ++EA+ +F  M D F+C+ +V+S+N+++N++++   + +A + Y   +  +  
Sbjct: 85  NYGRKGKIQEAVDVFERM-DFFNCEPSVQSYNAIMNILVEYRYFDQAHKVY---MRMRDK 140

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I+P+  TF + +K+ CR      A +L   MP + CE     YCT++ G  +EN   EA
Sbjct: 141 GIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEA 200

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L +EM   G  P  + FN LI+ LC+ G +  + +L++ +  +G  PN  T N  I G
Sbjct: 201 HELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQG 260

Query: 307 LCLKGNLDKAVSLLD----------------------------------RMVASKCMPNE 332
            C +  L++A+ LLD                                  +MV     P+ 
Sbjct: 261 FCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDG 320

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            TY +II+G  KLG   +  ++L     + F  +E  Y +LI+GL ++G  + A+ ++ +
Sbjct: 321 FTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNE 380

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
            MEKG KPN V+ + L+ GL + G   +A +++ EM  NGC+ + +TY+ ++ G  + G 
Sbjct: 381 AMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGC 440

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A  +  D      + +   ++ LI G C+  KL  A  +  +M + G  PDV+ Y+S
Sbjct: 441 VSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNS 500

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +++GLC AG  E+ +  F   L +E    P++ TYNIL  + CK   +  +++L+  M +
Sbjct: 501 ILNGLCKAGKYEDVMGTFK--LMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQN 558

Query: 573 RGCDPDLV------------------------------------TCNIFLTALKEKL--- 593
           +G  PD+V                                    T NI + A   KL   
Sbjct: 559 KGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMN 618

Query: 594 ----------EAPQDGTDFLNELAIRLF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                     E       +   + I  F K    + G+  + V ++K L P  +T+ RV+
Sbjct: 619 MAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVL 678

Query: 643 QELCRPKRIQAAI 655
             LC  +R+  A+
Sbjct: 679 NCLCLKRRVHEAV 691



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/517 (27%), Positives = 261/517 (50%), Gaps = 16/517 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF---IFIFKAYGKAHLVEEAIRLF 141
            F  LI      G  +  E +L ++   KR V    F   IFI + + +  ++ EAIRL 
Sbjct: 218 AFNKLIHTLCRKGHVQESERLLNKVL--KRGVSPNLFTVNIFI-QGFCQRAMLNEAIRLL 274

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             +         V ++N+++  + +      A  +   +VN  +    P+  T+N +I  
Sbjct: 275 DGVGRGL--TPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE---PDGFTYNSIIDG 329

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+LG++ NA Q+ R+   +   PD  TYC+L++GLC++  +D A+ + +E    G  P 
Sbjct: 330 YCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPN 389

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            V  N L+ GL + G + +A KL++ M   GC P+  TYN +I+GLC  G +  A +L+ 
Sbjct: 390 LVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVI 449

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             +A   +P+  T+ T+I+G  K  +  +   ++  M       +   Y+++++GL K G
Sbjct: 450 DAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAG 509

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K ED M  +K MMEKGC PN + Y+ L +  C+  K +EA  ++ EM N G   +   + 
Sbjct: 510 KYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFG 569

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLS 500
           +LMKGF ++G    A +++K + +     + +  Y+++I+       +  A  ++ +M  
Sbjct: 570 TLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCE 629

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  PD   Y  MI G C  G++         ++ +E    P + T+  +LN LC +  +
Sbjct: 630 NGFSPDSYTYRVMIDGFCKTGNINSGYSFL--LVKIEKGLIPSLTTFGRVLNCLCLKRRV 687

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
             ++ +++ M+ +G  P++V  N    A K+++ AP+
Sbjct: 688 HEAVGIIHLMVHKGIVPEVV--NTIFEADKKEVAAPK 722



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 189/394 (47%), Gaps = 7/394 (1%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
            Y+    T+ S+I  Y   G  ++ + +L     +  V  E ++  +     +   ++ A
Sbjct: 315 GYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRA 374

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           I +F+  +++   K  +   N+++  + Q+GL  +AL+  N +         P+  T+NL
Sbjct: 375 INVFNEAMEK-GLKPNLVLCNTLVKGLSQQGLILQALKLMNEM---SENGCSPDIWTYNL 430

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           VI  +C++G V +A  L  +   +   PD++T+ TL+DG CK+ +LD A+ ++D M   G
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  +T+N ++NGLCK G+          M  KGC+PN +TYN L    C    +++A+
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM--EERKFHVNEYIYSTLIS 375
           +L++ M      P+ V +GT++ G    G  +DGA  L     E+ KF      Y+ +I+
Sbjct: 551 NLIEEMQNKGLTPDVVNFGTLMKGFCDNGD-LDGAYQLFKRVDEQYKFSHTIATYNIMIN 609

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
               +     A KL+ +M E G  P++  Y  +IDG C+ G  +     L   I  G   
Sbjct: 610 AFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIP 669

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           +  T+  ++       + H+AV I   M     V
Sbjct: 670 SLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIV 703



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 148/305 (48%), Gaps = 19/305 (6%)

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
           E +Y   +    ++GK ++A+ ++++M    C+P+   Y+A+++ L      D+A ++  
Sbjct: 76  EGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYM 135

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            M + G   + +T++  MK F  + + H A  +  +M    C  + V Y  +I G  E+ 
Sbjct: 136 RMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEEN 195

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
              EA  ++ +ML  G  PD++A++ +IH LC  G V+E+ +L N++  L+    P++FT
Sbjct: 196 HRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKV--LKRGVSPNLFT 253

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ--------- 597
            NI +   C+++ ++ +I LL+  + RG  PD++T N  +  L +  +  +         
Sbjct: 254 VNIFIQGFCQRAMLNEAIRLLDG-VGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMV 312

Query: 598 ------DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                 DG  + N +     K        +I+     K   P  ST+  ++  LC+   I
Sbjct: 313 NEGYEPDGFTY-NSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDI 371

Query: 652 QAAIN 656
             AIN
Sbjct: 372 DRAIN 376



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 127/311 (40%), Gaps = 67/311 (21%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKR--------------------TVKSFNSVLN 162
            +  A  K HL +  +  F+T++D + CK+                     V ++NS+LN
Sbjct: 447 LVIDAIAKGHLPD--VFTFNTLIDGY-CKKLKLDNAIEIVDRMWNHGVSPDVITYNSILN 503

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
            + + G Y   +  +  ++       +PN +T+N++ ++ C+   V+ A+ L  EM  + 
Sbjct: 504 GLCKAGKYEDVMGTFKLMMEK---GCVPNIITYNILTESFCKARKVEEALNLIEEMQNKG 560

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLL-------------------------------- 250
             PD+  + TLM G C    LD A  L                                 
Sbjct: 561 LTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMA 620

Query: 251 ----DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
               ++M  +G  P   T+ V+I+G CK G +      +     KG +P+  T+  +++ 
Sbjct: 621 EKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNC 680

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LCLK  + +AV ++  MV    +P  V   TI     K    V   ++++    +K H+ 
Sbjct: 681 LCLKRRVHEAVGIIHLMVHKGIVPEVVN--TIFEADKK---EVAAPKIVVENLMKKGHIT 735

Query: 367 EYIYSTLISGL 377
            + Y  L  G+
Sbjct: 736 YFAYEILHDGI 746


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 159/497 (31%), Positives = 253/497 (50%), Gaps = 21/497 (4%)

Query: 91  QHYANSGDFKSLEMVLYRMRREKRV------VLEKSFI-------FIFKAYGKAHLVEEA 137
           QH  ++G+  +L  V  R +R +         L  +F+        +   Y  A   EEA
Sbjct: 56  QHSVHTGN--ALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
             +   M +++    ++K+ N VL+ + + G   + L   +H           +  T+  
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSG---KVLAAMDHFETTTTNGCTIDIHTYTA 170

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           ++  + +   + +A+ L  ++    C P I TY  L++GLCK  RL+EA+ LL ++  +G
Sbjct: 171 IVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 230

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C P  VT+  LI+GL K      A KL   M L+G + + V Y  LI GL   G + +A 
Sbjct: 231 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQAS 290

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           S+   M +  C+P+ VT  T+I+GL K GR     R+  SME R    NE +YS LI GL
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 350

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K  K + A+++  QM +  C P+T+ Y+ LIDGLC+ G  + A     EM+  GC  + 
Sbjct: 351 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 410

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           +TY+ L+ GF ++G    A  ++ DM+ ++C  N V Y  LI GLC+  +L +A + +  
Sbjct: 411 YTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQH 470

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M  RGC PD   YSS++ GLC +G +E    LF+EM   E     +  T   L+  LCK 
Sbjct: 471 MKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEM---ERSGVANSQTRTRLIFHLCKA 527

Query: 558 SNISHSIDLLNSMMDRG 574
           + +  ++ L N++   G
Sbjct: 528 NRVDEAVSLFNAIRKEG 544



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 160/556 (28%), Positives = 273/556 (49%), Gaps = 33/556 (5%)

Query: 102 LEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVL 161
           +E  + R+RRE   +   + + IF+    A L  E  +   +    F  + +V + N++L
Sbjct: 12  IEAAVGRLRRE---ISTDAVVKIFQCLKDADLAWELFQCLSS--PRFGFQHSVHTGNALL 66

Query: 162 NVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR 221
           +V  +     R  E  N + N      LP+  T+N++I   C     + A  + REM   
Sbjct: 67  DVFART---KRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEED 123

Query: 222 -NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
               P + T+  ++ GLCK  ++  A+   +    +GC     T+  +++ L KN ++  
Sbjct: 124 YGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQD 183

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A  L++ +   GC P   TYN L++GLC  G L++A+ LL ++V + C P+ VTY ++I+
Sbjct: 184 AVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLID 243

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           GL K  R+ +  ++   M  R   ++   Y+ LI GL + GK   A  ++K M  +GC P
Sbjct: 244 GLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVP 303

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + V  S +IDGLC+ G+   A  I   M   G A N   YS+L+ G  ++ K   A+E+ 
Sbjct: 304 DVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 363

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
             M K  C  + + Y++LI GLC+ G +  AR  + +ML  GCKPDV  Y+ ++ G C A
Sbjct: 364 AQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKA 423

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           G+ + A  +F++M        P+V TY  L++ LCK+  ++ +      M +RGC PD  
Sbjct: 424 GNTDAACGVFDDM--SSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPD-- 479

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
                              +   + L   L K  +  GG  + + M +  ++  + T  R
Sbjct: 480 -------------------SFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTR 519

Query: 641 VVQELCRPKRIQAAIN 656
           ++  LC+  R+  A++
Sbjct: 520 LIFHLCKANRVDEAVS 535


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 146/464 (31%), Positives = 245/464 (52%), Gaps = 21/464 (4%)

Query: 134 VEEAIRLFHTMV------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           +EE ++    M+      D   C   ++ F        + G   +A      + N+    
Sbjct: 123 LEEGLKFLERMIYQGDIPDVIACTSLIRGF-------CRSGKTRKATRIMEILENS---G 172

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
            +P+ +T+N++I   C+ G +D A+Q+   M V    PD+ TY T++  LC   +L EA+
Sbjct: 173 AVPDVITYNVLIGGYCKSGEIDKALQVLERMSV---APDVVTYNTILRSLCDSGKLKEAM 229

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            +LD      C+P  +T+ +LI   C +  +G+A KL+D M  KGC P+ VTYN LI+G+
Sbjct: 230 EVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 289

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C +G LD+A+  L+ M    C PN +T+  I+  +   GR +D  R+L  M  +    + 
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSV 349

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             ++ LI+ L ++     A+ + ++M + GC PN++ Y+ L+ G C+  K D A E L  
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M++ GC  +  TY++L+    + GK   AVEI   ++   C    + Y+ +I GL + GK
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
              A  +  +M  +G KPD++ YS+++ GL   G V+EA+K+F++M  L  K  P   TY
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIK--PSAVTY 527

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           N ++  LCK    S +ID L  M+++GC P   T  I +  + +
Sbjct: 528 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 239/435 (54%), Gaps = 13/435 (2%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SLI+ +  SG  +    ++  +     V    ++  +   Y K+  +++A+++   M   
Sbjct: 147 SLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM--- 203

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
                 V ++N++L  +   G    A+E  +  +  +     P+ +T+ ++I+  C    
Sbjct: 204 -SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE---CYPDVITYTILIEATCNDSG 259

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V  A++L  EM  + C+PD+ TY  L++G+CKE RLDEA+  L+ M + GC P  +T N+
Sbjct: 260 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNI 319

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           ++  +C  G    A +L+ +M  KGC P+ VT+N LI+ LC K  L +A+ +L++M    
Sbjct: 320 ILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 379

Query: 328 CMPNEVTYGTIINGLV---KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           CMPN ++Y  +++G     K+ RA++   +++S   R  + +   Y+TL++ L K+GKA+
Sbjct: 380 CMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS---RGCYPDIVTYNTLLTALCKDGKAD 436

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+++  Q+  KGC P  + Y+ +IDGL +VGK + A E+L EM   G   +  TYS+L+
Sbjct: 437 AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLL 496

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +G    GK  +A++I+ DM   +   + V Y+ ++ GLC+  +   A      M+ +GCK
Sbjct: 497 RGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCK 556

Query: 505 PDVVAYSSMIHGLCN 519
           P    Y+ +I G+ +
Sbjct: 557 PTKATYTILIEGIAD 571



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 215/435 (49%), Gaps = 21/435 (4%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L +   L+E +  L+ M   G  P  +    LI G C++G+  +A ++++ +   G +P+
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            +TYN LI G C  G +DKA+ +L+RM  +   P+ VTY TI+  L   G+  +   VL 
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
              +R+ + +   Y+ LI     +     AMKL  +M +KGCKP+ V Y+ LI+G+C+ G
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + DEA + L  M   GC  N  T++ +++    +G+   A  +  DM +  C  + V ++
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +LI+ LC    L  A  V  +M   GC P+ ++Y+ ++HG C    ++ A++    M  +
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIM--V 411

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                PD+ TYN LL ALCK      ++++LN +  +GC P L+T N  +  L  K+   
Sbjct: 412 SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLT-KVGKT 470

Query: 597 QDGTDFLNELAIRLFK---------------RQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
           +   + L E+  +  K                 +     KI   M    + P   T+  +
Sbjct: 471 EYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAI 530

Query: 642 VQELCRPKRIQAAIN 656
           +  LC+ ++   AI+
Sbjct: 531 MLGLCKAQQTSRAID 545



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 207/368 (56%), Gaps = 10/368 (2%)

Query: 85  TFYSLIQHYANSGDFK-SLEMVLYRMRRE--KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ ++++   +SG  K ++E++  +M+RE    V+   ++  + +A      V +A++L 
Sbjct: 211 TYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVI---TYTILIEATCNDSGVGQAMKLL 267

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  +  CK  V ++N ++N I +EG    A++F N   N       PN +T N+++++
Sbjct: 268 DEMRKK-GCKPDVVTYNVLINGICKEGRLDEAIKFLN---NMPLYGCQPNVITHNIILRS 323

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C  G   +A +L  +M  + C P + T+  L++ LC++  L  A+ +L++M   GC P 
Sbjct: 324 MCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            +++N L++G C+  ++ RA + ++ M  +GC P+ VTYNTL+  LC  G  D AV +L+
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILN 443

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           ++ +  C P  +TY T+I+GL K+G+    A +L  M  +    +   YSTL+ GL  EG
Sbjct: 444 QLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEG 503

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K ++A+K++  M     KP+ V Y+A++ GLC+  +   A + L  M+  GC     TY+
Sbjct: 504 KVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYT 563

Query: 442 SLMKGFFE 449
            L++G  +
Sbjct: 564 ILIEGIAD 571



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 163/303 (53%), Gaps = 19/303 (6%)

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
           E+  +  +  L + G+ E+ +K  ++M+ +G  P+ +  ++LI G CR GK  +A  I+ 
Sbjct: 107 EFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIME 166

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            + N+G   +  TY+ L+ G+ +SG+  KA+++ + M+      + V Y+ ++  LC+ G
Sbjct: 167 ILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSG 223

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           KL+EA  V  + + R C PDV+ Y+ +I   CN   V +A+KL +EM   +   +PDV T
Sbjct: 224 KLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM--RKKGCKPDVVT 281

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK---LEAPQDGTDFL 603
           YN+L+N +CK+  +  +I  LN+M   GC P+++T NI L ++      ++A +   D L
Sbjct: 282 YNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADML 341

Query: 604 NE----------LAIRLFKRQRTSG-GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
            +          + I    R+R  G    ++E M +    P + ++  ++   C+ K++ 
Sbjct: 342 RKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMD 401

Query: 653 AAI 655
            AI
Sbjct: 402 RAI 404


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/497 (31%), Positives = 257/497 (51%), Gaps = 19/497 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF--- 141
           T   L++ + + G       +L  M  E+    E S+  +     KA  VEEA+RLF   
Sbjct: 214 TLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDR 273

Query: 142 --HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
              +         +++ +N V+  + Q      A++ +  +      N+ P++ ++ ++I
Sbjct: 274 ELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKM---NERNVSPDSWSYGILI 330

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             + + G +++A  LF+++      P    Y +L+ GLC  N  D+A  L  +M   GC 
Sbjct: 331 DGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCP 390

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P+PVT+NV+I+  CK G L  A  L+  M   G +P+ VTYNT++ GLC    +++A+ L
Sbjct: 391 PSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL 450

Query: 320 LDRMVASKCMPNEVTYGTIINGLVK---------LGRAVDGARVLMSMEERKFHVNEYIY 370
            + M    C PN  ++ TII GL +          G+  +  R+L  M +     +   Y
Sbjct: 451 FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTY 510

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           STLISGL    + +DA  L + M+++ CKP  V  + LI GLC+ G+  EA E+L  M++
Sbjct: 511 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 570

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +G + +  TY++L+ G   +G+  +A E+  DM       N V Y+ L+ GLC+  +L E
Sbjct: 571 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE 630

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  V+ QM S GC P++  Y+++I G C+AG V+  LKLF EM+C      PD   Y  L
Sbjct: 631 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVC--AGISPDHVVYGTL 688

Query: 551 LNALCKQSNISHSIDLL 567
              LCK    + ++++L
Sbjct: 689 AAELCKSGRSARALEIL 705



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 171/586 (29%), Positives = 265/586 (45%), Gaps = 80/586 (13%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  A  KA  V++A+ L  TM  E        S +SVL  ++  G    AL+ Y  
Sbjct: 147 AYNIVVVALCKAARVDDALELARTM-SEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE 205

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
             N +     P  +T N++++  C  G VD A +L R MP   C PD  +YCT++DGLCK
Sbjct: 206 --NRRE----PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCK 259

Query: 240 E-----------------------------------------NRLDEAVLLLDEMQVDGC 258
                                                     +R+DEAV + ++M     
Sbjct: 260 AGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNV 319

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P   ++ +LI+GL K G+L  A  L   +   G  P+ V Y +LIHGLC+  + D A  
Sbjct: 320 SPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARE 379

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           L   M    C P+ VTY  +I+   K G   +   ++  M E     +   Y+T++ GL 
Sbjct: 380 LFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLC 439

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV---------GKPDEAEEILFEMI 429
           K  + E+A+ L+ +M   GC PN   ++ +I GLC+          GK DEA  +L  M 
Sbjct: 440 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMT 499

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           ++G   +  TYS+L+ G     +   A  + +DM K  C    V  + LIHGLC+ G+++
Sbjct: 500 DDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 559

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EAR V   M+S G  PDVV Y++++HG C AG  E A +L ++M+       P+V TY  
Sbjct: 560 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR--GLAPNVVTYTA 617

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L++ LCK + +  +  +   M   GC P+L T                        L + 
Sbjct: 618 LVSGLCKANRLPEACGVFAQMKSSGCAPNLFT---------------------YTALILG 656

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                +  GG K+   M+   +SP    +  +  ELC+  R   A+
Sbjct: 657 FCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARAL 702



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 214/408 (52%), Gaps = 13/408 (3%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA+++F  M +E +      S+  +++ + + G  + A   +  ++   H  + P+T+
Sbjct: 304 IDEAVQMFEKM-NERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL---HSGVTPSTV 359

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +  +I  +C     D+A +LF +M  R C P   TY  ++D  CK   L+EA  L+ +M
Sbjct: 360 AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 419

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL---- 309
             DG  P  VT+N +++GLCK+  +  A  L + M   GC PN  ++NT+I GLC     
Sbjct: 420 IEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKI 479

Query: 310 -----KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
                +G LD+A  LL RM     +P+ VTY T+I+GL  + R  D   +L  M +R+  
Sbjct: 480 DQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 539

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
                 +TLI GL K G+ ++A ++   M+  G  P+ V Y+ L+ G CR G+ + A E+
Sbjct: 540 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 599

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L +M+  G A N  TY++L+ G  ++ +  +A  ++  M  + C  N   Y+ LI G C 
Sbjct: 600 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCS 659

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
            G++     ++ +M+  G  PD V Y ++   LC +G    AL++  E
Sbjct: 660 AGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILRE 707



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 225/461 (48%), Gaps = 50/461 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +     KA  + +A  LF  ++       TV ++ S+++ +     +  A E +  
Sbjct: 325 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTV-AYTSLIHGLCMANSFDDARELF-- 381

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
             +       P+ +T+N++I   C+ G+++ A  L ++M      PD+ TY T+MDGLCK
Sbjct: 382 -ADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 440

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN---------GELGRAAKLVDNMFL 290
            +R++EA+LL +EM+  GC P   + N +I GLC+          G+L  A +L+  M  
Sbjct: 441 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTD 500

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            G +P+ VTY+TLI GLC    +D A  LL+ MV  +C P  VT  T+I+GL K GR  +
Sbjct: 501 DGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKE 560

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              VL +M       +   Y+TL+ G  + G+ E A +L   M+ +G  PN V Y+AL+ 
Sbjct: 561 AREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVS 620

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC+  +  EA  +  +M ++GCA N FTY++L+ GF  +G+    ++++ +M       
Sbjct: 621 GLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISP 680

Query: 471 NEVCYSVLIHGLCEDGK-------LREARM-----VW----------------------- 495
           + V Y  L   LC+ G+       LRE R       W                       
Sbjct: 681 DHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALG 740

Query: 496 --TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
               M+  G  P     +S++ GLC +G   EA  +  E++
Sbjct: 741 FVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIM 781



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 134/427 (31%), Positives = 206/427 (48%), Gaps = 17/427 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI     +  F     +   M R        ++  +  A  K  ++EEA  L   M
Sbjct: 360 AYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKM 419

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI----- 199
           +++ H    V ++N+V++ + +      AL  +N +   + +   PN  + N +I     
Sbjct: 420 IEDGHVPDVV-TYNTVMDGLCKSSRVEEALLLFNEM---ERLGCTPNRRSHNTIILGLCQ 475

Query: 200 ----KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
                  C+ G +D A +L + M      PD+ TY TL+ GLC   R+D+A  LL++M  
Sbjct: 476 QSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 535

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
             C PT VT N LI+GLCK G +  A +++D M   G  P+ VTYNTL+HG C  G  ++
Sbjct: 536 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTER 595

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  LL  MVA    PN VTY  +++GL K  R  +   V   M+      N + Y+ LI 
Sbjct: 596 ARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 655

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN--GC 433
           G    G+ +  +KL+ +M+  G  P+ VVY  L   LC+ G+   A EIL E   +    
Sbjct: 656 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSE 715

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV-YNEVCYSVLIHGLCEDGKLREAR 492
           A     Y   + G  E+GK   A+   +DM +   +   E C S L+ GLC+ G+  EAR
Sbjct: 716 AWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCAS-LVAGLCKSGQGGEAR 774

Query: 493 MVWTQML 499
            V  +++
Sbjct: 775 AVLEEIM 781



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 218/450 (48%), Gaps = 59/450 (13%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE---PDIYTYCTLMDGLCKEN 241
              I P  L F  VI+  C +G    A+++F  M    C    PD+Y    L+D L K  
Sbjct: 3   QQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLM--EECHSPYPDVYN--VLIDSLSKRQ 58

Query: 242 RLDEAVLLLDEMQVD-GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
              EAV  + ++ VD GCFP   TF  ++ GLCK G++  A  ++D M  +   P   T 
Sbjct: 59  ET-EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATS 117

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           + L H LCL+G++++A  LL+ M  +    N   Y  ++  L K  R  D   +  +M E
Sbjct: 118 SFLAHELCLRGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTMSE 173

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           ++  +      +++ GL   G+ ++A++++++   + C    V  + L++G C  G+ D+
Sbjct: 174 KRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPC---LVTLNVLLEGFCSRGQVDK 230

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD------------------ 462
           A E+L  M +  CA +  +Y +++ G  ++G+  +AV ++ D                  
Sbjct: 231 ARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRG 290

Query: 463 -----------------------MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
                                  M + N   +   Y +LI GL + GKL +AR ++ ++L
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G  P  VAY+S+IHGLC A S ++A +LF +M        P   TYN++++A CK+  
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADM--NRRGCPPSPVTYNVMIDASCKRGM 408

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +  + DL+  M++ G  PD+VT N  +  L
Sbjct: 409 LEEACDLIKKMIEDGHVPDVVTYNTVMDGL 438



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 124/274 (45%), Gaps = 18/274 (6%)

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M ++G  P  ++++++I G C VG+  EA +I F ++    +     Y+ L+    +  +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKI-FSLMEECHSPYPDVYNVLIDSLSKRQE 59

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
                ++ + M    C  +   ++ ++ GLC+ GK+ EA +V  +M SR   P     S 
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           + H LC  GS+E A +L      LE     +   YNI++ ALCK + +  +++L  +M +
Sbjct: 120 LAHELCLRGSMERAFQL------LEIMPVANSSAYNIVVVALCKAARVDDALELARTMSE 173

Query: 573 RGCDPDLVTCNIFLTAL------KEKLEAPQDGTD-----FLNELAIRLFKRQRTSGGFK 621
           +       + +  L  L       E L+  ++         LN L      R +     +
Sbjct: 174 KRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARE 233

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           ++  M  +  +P   ++  V+  LC+  R++ A+
Sbjct: 234 LLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAV 267


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  266 bits (680), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 148/487 (30%), Positives = 253/487 (51%), Gaps = 22/487 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ + F +VI  +CR   +D A  +        CEPD  TY   +DGLCK  R+D+A  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +M    C PT VT+  L++GL K G L  A  +++ M  KG  P   TY  +I GL  
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE-- 367
            G +++A  +   M+ + C P+   Y  +I GL K G+  +   +      RK H     
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 368 --YIYSTLISGLFKEGKAEDAMKLW-KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
               Y++LI GL K G+  +A +++  + +E+G  P+ V Y+++IDGLC++G+ +E  E 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             EM N G   +A TY++L+ GF ++    KA  +++ M ++  V + V Y++++ GLC+
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G++ EA   +  M  RGC   VV YS+++ G C+ G+V  A++LF  M  L+   +P++
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM--LDRGCEPNL 362

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF-- 602
            +YNI++  LC+   ++ +      ++ R   PD+ T N FL  L ++L+   DG +   
Sbjct: 363 VSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFE 422

Query: 603 ----------LNELAIRLFKRQRTSG---GFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                     L+  +I +    R  G     +I   M+ + ++P    +  +++ LC   
Sbjct: 423 SMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAG 482

Query: 650 RIQAAIN 656
           R+  A+ 
Sbjct: 483 RVDEALE 489



 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 149/481 (30%), Positives = 240/481 (49%), Gaps = 46/481 (9%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C   + +F  V+N + +E    R  E ++ +  A      P+ +T+N+ I  +C+   VD
Sbjct: 3   CSPDMVAFTVVINGLCRE---KRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVD 59

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +A QL ++M  + C P   TY  L+DGL K  RLDEA+ +L++M   G  PT  T+ V+I
Sbjct: 60  DAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVI 119

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL--------- 320
           +GL K G +  A ++  +M   GC P+   Y  LI GLC  G  ++A +L          
Sbjct: 120 DGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHH 179

Query: 321 -------------------------------DRMVASKCMPNEVTYGTIINGLVKLGRAV 349
                                          D  V    +P+ VTY +II+GL KLGR  
Sbjct: 180 ATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVE 239

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +G      M  R +  +   Y+ LI G  K      A ++++QM++ G   +TV Y+ ++
Sbjct: 240 EGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIIL 299

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DGLC+ G+  EA      M   GC A   TYS+LM GF   G    AVE+++ M    C 
Sbjct: 300 DGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCE 359

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA-GSVEEALK 528
            N V Y+++I GLC  GKL +A   + ++L R   PDV  +++ +HGLC    +V + ++
Sbjct: 360 PNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVE 419

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           LF  M  +   + P++ +Y+IL++ +C+   +  ++++   M+ RG  PD+V  N  +  
Sbjct: 420 LFESM--VSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRW 477

Query: 589 L 589
           L
Sbjct: 478 L 478



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 239/454 (52%), Gaps = 13/454 (2%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  ++EA+ +   MV++ +   T+K++  V++ + + G    A   +   V+       
Sbjct: 89  KAGRLDEAMAVLEQMVEKGNSP-TLKTYTVVIDGLSKAGRVEEARRIF---VDMLGNGCR 144

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR----NCEPDIYTYCTLMDGLCKENRLDE 245
           P+   +  +IK +C+ G  + A  L++E   R       PD+ TY +L+DGLCK  R+ E
Sbjct: 145 PDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILE 204

Query: 246 AVLLLDEMQVD-GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           A  + D+  V+ G  P  VT+  +I+GLCK G +    +    M  +G  P+ VTY  LI
Sbjct: 205 ARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALI 264

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            G      + KA  +  +M+ S  + + VTY  I++GL K GR  +     ++MEER   
Sbjct: 265 DGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCV 324

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
                YS L+ G   EG    A++L+++M+++GC+PN V Y+ +I GLCR GK  +A   
Sbjct: 325 ATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFY 384

Query: 425 LFEMINNGCAANAFTYSSLMKGFFES-GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
             +++      + +T+++ + G  +        VE+++ M       N   YS+L+ G+C
Sbjct: 385 FEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGIC 444

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
             G L  A  ++ +M+SRG  PDVV ++++I  LC AG V+EAL++F E   LE +S PD
Sbjct: 445 RAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRE---LERRSAPD 501

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
            ++Y  LL+ L +   +  +  L   M  +GC P
Sbjct: 502 AWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 224/457 (49%), Gaps = 63/457 (13%)

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C P  V F V+INGLC+   L  A  +++     GC P+ VTYN  I GLC    +D A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            LL +M   KC+P  VTY  +++GL+K GR  +   VL  M E+        Y+ +I GL
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K G+ E+A +++  M+  GC+P+  VY+ALI GLC+ GKP+EA  +  E       A A
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 438 ----FTYSSLMKGFFESGKGHKAVEIWKDMA-KNNCVYNEVCYSVLIHGLCEDGKLREAR 492
                TY+SL+ G  ++G+  +A +++ D A +   + + V Y+ +I GLC+ G++ E  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 493 MVWTQMLSRGCKPDVVAYSSMI-----------------------------------HGL 517
             + +M +RG +PD V Y+++I                                    GL
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C AG V EA   F  M   E      V TY+ L++  C + N+S +++L   M+DRGC+P
Sbjct: 303 CKAGRVAEAYATFLAM--EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEP 360

Query: 578 DLVTCNIFLTAL------------KEKLEAPQDGTD------FLNELAIRLFKRQRTSGG 619
           +LV+ NI +  L             EKL   +   D      FL+ L  RL      S G
Sbjct: 361 NLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRL---DTVSDG 417

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            ++ E M+ +  SP   ++  ++  +CR   ++ A+ 
Sbjct: 418 VELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALE 454



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 212/459 (46%), Gaps = 40/459 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+     +G       VL +M  +      K++  +     KA  VEEA R+F  M
Sbjct: 79  TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 138

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH------------------- 185
           +    C+     + +++  + + G    A   Y      KH                   
Sbjct: 139 LGN-GCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLC 197

Query: 186 ------------------MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
                                +P+ +T+  +I  +C+LG V+   + F EM  R  EPD 
Sbjct: 198 KAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDA 257

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            TY  L+DG  K   + +A  +  +M   G   + VT+N++++GLCK G +  A      
Sbjct: 258 VTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLA 317

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  +GC+   VTY+ L+ G C +GN+  AV L  RM+   C PN V+Y  II GL + G+
Sbjct: 318 MEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGK 377

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKE-GKAEDAMKLWKQMMEKGCKPNTVVYS 406
                     + +R+   + Y ++  + GL +      D ++L++ M+ +G  PN   YS
Sbjct: 378 LAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYS 437

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            L+DG+CR G  + A EI  EM++ G A +   +++L++    +G+  +A+E+++++ + 
Sbjct: 438 ILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 497

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           +   +   Y  L+ GL    ++ EAR++   M  +GC P
Sbjct: 498 S-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAP 535


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 164/509 (32%), Positives = 261/509 (51%), Gaps = 49/509 (9%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E+++  +     KA L  +A  +   M D       + ++++V+N   ++G   RA E  
Sbjct: 9   ERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEIL 68

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG- 236
             +V    M   P+ +T+  V+  +CR G +D A ++ REM ++  EPD +T+  L+ G 
Sbjct: 69  REMVTRDGMA--PDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 237 ----------------------------------LCKENRLDEAVLLLDEMQV--DGCF- 259
                                             LC+E R+ EA  L  EM++  DG + 
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+  LI+G CK+G L +A K++  M  + C+PN VTY++L+HGLC  G+LD+A+ L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLF 378
             RM +  C+PN VTY T+I+GL      VD AR+LM  M       +   Y+ L+ G  
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCA-AHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-INNGCAANA 437
           + G+ E+A +L+K+M  K C P+ + Y+ L+ G C   + +EA  +L  M    G   + 
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TYS ++ G+  + +  +A E  ++M   N   N V YS LI GLC+ G++  A     +
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA----ME 421

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           +L    KPDVV Y+ +I GLC     EEAL L  EM+    + +P V T+N ++ ALC+ 
Sbjct: 422 VLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMV--NKRVEPSVGTFNSVIGALCRL 479

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            ++  +  LL +M   G +P +VT    L
Sbjct: 480 GDMDEAWKLLVAMAAHGLEPGMVTYTTLL 508



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 252/501 (50%), Gaps = 68/501 (13%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           + PN  T+N+V+  +C+  L   A ++ +EM   ++  PD+ TY T+++G CK+  +D A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 247 VLLLDEMQV-DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
             +L EM   DG  P  VT+  +++GLC++G++ RA ++V  M LKG  P++ T++ LI 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 306 GLCLKGNLDKAVSLLDRMVASKCM------------------------------------ 329
           G C    +D+A+ L   ++ S C                                     
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGA 184

Query: 330 --PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+ VTY  +I+G  K G      ++L  ME RK   N   YS+L+ GL K G  + A+
Sbjct: 185 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+++M  KGC PN V Y+ LI GLC   K D A  ++ EM    C A+  +Y++L+ G+
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGY 304

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM-LSRGCKPD 506
              G+  +A +++K+MA  +C+ + + Y+ L+ G C   +L EAR +   M  + G  PD
Sbjct: 305 CRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 364

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           VV YS ++ G   A    EA +   EM+       P+  TY+ L++ LCK   ++H++++
Sbjct: 365 VVTYSIVVAGYSRAKRFVEAAEFIQEMIA--RNVAPNAVTYSSLIDGLCKAGRVNHAMEV 422

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           L + +D+   PD+VT  I +  L         GTD             RT     ++E M
Sbjct: 423 LKN-VDK---PDVVTYTIVIEGLC--------GTD-------------RTEEALTLLEEM 457

Query: 627 LQKFLSPQTSTWERVVQELCR 647
           + K + P   T+  V+  LCR
Sbjct: 458 VNKRVEPSVGTFNSVIGALCR 478



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 243/506 (48%), Gaps = 49/506 (9%)

Query: 105 VLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
           VL  MR  K V  +  ++  +   + K   ++ A  +   MV        V ++ SV++ 
Sbjct: 31  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDG 90

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           + ++G   RA E    +   K   + P+  TF+ +I   C    VD A++L++E+   +C
Sbjct: 91  LCRDGKMDRACEMVREM---KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSC 147

Query: 224 --------------------------------------EPDIYTYCTLMDGLCKENRLDE 245
                                                 +PD+ TY  L+DG CK   L++
Sbjct: 148 RLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEK 207

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ +L  M+   C P  VT++ L++GLCK G+L +A  L   M  KGC+PN VTY TLIH
Sbjct: 208 AMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIH 267

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC    +D A  L+D M A+ C  + V+Y  +++G  +LGR  +  ++   M  +    
Sbjct: 268 GLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLP 327

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQM-MEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           +   Y+ L+ G     + E+A  L + M    G  P+ V YS ++ G  R  +  EA E 
Sbjct: 328 DRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEF 387

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           + EMI    A NA TYSSL+ G  ++G+ + A+E+ K++ K + V     Y+++I GLC 
Sbjct: 388 IQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDKPDVVT----YTIVIEGLCG 443

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             +  EA  +  +M+++  +P V  ++S+I  LC  G ++EA KL   M       +P +
Sbjct: 444 TDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA--HGLEPGM 501

Query: 545 FTYNILLNALCKQSNISHSIDLLNSM 570
            TY  LL    +   +  + +L   M
Sbjct: 502 VTYTTLLEGFSRTGRMEIAYELFEVM 527



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 224/441 (50%), Gaps = 44/441 (9%)

Query: 134 VEEAIRLFHTM--VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           + EA  LF  M   ++   K  V ++ ++++   + G   +A++    +   K    +PN
Sbjct: 167 IGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK---CVPN 223

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +T++ ++  +C+ G +D A+ LFR M  + C P++ TY TL+ GLC  +++D A LL+D
Sbjct: 224 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 283

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM    C    V++N L++G C+ G +  A +L   M  K CLP+ +TY  L+ G C   
Sbjct: 284 EMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNAS 343

Query: 312 NLDKAVSLLDRM-VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
            L++A  LL+ M  A+   P+ VTY  ++ G  +  R V+ A  +  M  R    N   Y
Sbjct: 344 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 403

Query: 371 STLISGLFKEGK-------------------------------AEDAMKLWKQMMEKGCK 399
           S+LI GL K G+                                E+A+ L ++M+ K  +
Sbjct: 404 SSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVE 463

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+   ++++I  LCR+G  DEA ++L  M  +G      TY++L++GF  +G+   A E+
Sbjct: 464 PSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYEL 523

Query: 460 WKDM----AKNNCVYN---EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
           ++ M     K++   N   E  +S LI GLC+  ++ +A  V  ++ SR C+P      +
Sbjct: 524 FEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLA 583

Query: 513 MIHGLCNAGSVEEALKLFNEM 533
           ++ GL  AG  EEA KL N +
Sbjct: 584 IVDGLLRAGRTEEAGKLINSI 604



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/502 (26%), Positives = 249/502 (49%), Gaps = 17/502 (3%)

Query: 85  TFYSLIQHYANSGDF-KSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFH 142
           T+ S++      G   ++ EMV  R  + K V  +K +F  +   +  A  V+EA++L+ 
Sbjct: 83  TYTSVVDGLCRDGKMDRACEMV--REMKLKGVEPDKFTFSALITGWCNARKVDEALKLYK 140

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            ++    C+    S ++++  + +E     A E +  +   +     P+ +T+  +I   
Sbjct: 141 EILTS-SCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGF 199

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ G ++ A+++   M  R C P++ TY +L+ GLCK   LD+A+ L   M   GC P  
Sbjct: 200 CKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNV 259

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+  LI+GLC   ++  A  L+D M    C  + V+YN L+ G C  G +++A  L   
Sbjct: 260 VTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKE 319

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI--YSTLISGLFKE 380
           M A  C+P+ +TY  ++ G     R ++ AR L+   +    ++  +  YS +++G  + 
Sbjct: 320 MAAKSCLPDRITYTCLVRGFCNASR-LEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRA 378

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            +  +A +  ++M+ +   PN V YS+LIDGLC+ G+ + A E+L     N    +  TY
Sbjct: 379 KRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVL----KNVDKPDVVTY 434

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + +++G   + +  +A+ + ++M       +   ++ +I  LC  G + EA  +   M +
Sbjct: 435 TIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 494

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV-----FTYNILLNALC 555
            G +P +V Y++++ G    G +E A +LF  M     KS           ++ L+  LC
Sbjct: 495 HGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLC 554

Query: 556 KQSNISHSIDLLNSMMDRGCDP 577
           K   I  ++ ++  +  R C+P
Sbjct: 555 KAREIDKAMAVVEELRSRECEP 576



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 184/345 (53%), Gaps = 23/345 (6%)

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI-YSTLISGLFKEGKAEDAMK 388
           PNE TY  ++NGL K         VL  M + K    + + YST+I+G  K+G+ + A +
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 389 LWKQMMEK-GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           + ++M+ + G  P+ V Y++++DGLCR GK D A E++ EM   G   + FT+S+L+ G+
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR---GCK 504
             + K  +A++++K++  ++C  + V  S LI GLC + ++ EA  ++ +M  R     K
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PDVV Y+++I G C +G++E+A+K+   M     K  P+V TY+ LL+ LCK  ++  ++
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVM--EGRKCVPNVVTYSSLLHGLCKAGDLDQAL 244

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEA-------------PQDGTDFLNELAIR 609
           DL   M  +GC P++VT    +  L    K++A             P D   + N L   
Sbjct: 245 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSY-NALLDG 303

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             +  R     ++ + M  K   P   T+  +V+  C   R++ A
Sbjct: 304 YCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEA 348



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 202/436 (46%), Gaps = 59/436 (13%)

Query: 77  GSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEE 136
           G+++    T+ +LI  +  SG+ +    +L  M   K V    ++  +     KA  +++
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 242

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM-------NIL 189
           A+ LF  M           S   V NV+    L H       H V+A  +          
Sbjct: 243 ALDLFRRMT----------SKGCVPNVVTYTTLIHGLCA--AHKVDAARLLMDEMTATCC 290

Query: 190 P-NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           P +T+++N ++   CRLG ++ A QLF+EM  ++C PD  TY  L+ G C  +RL+EA  
Sbjct: 291 PADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARF 350

Query: 249 LLDEMQ-VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           LL+ M+   G  P  VT+++++ G  +      AA+ +  M  +   PN VTY++LI GL
Sbjct: 351 LLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGL 410

Query: 308 CLKG----------NLDK---------------------AVSLLDRMVASKCMPNEVTYG 336
           C  G          N+DK                     A++LL+ MV  +  P+  T+ 
Sbjct: 411 CKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           ++I  L +LG   +  ++L++M           Y+TL+ G  + G+ E A +L++ M  K
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530

Query: 397 GCKPNTVV-------YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
             K ++         +SALI GLC+  + D+A  ++ E+ +  C        +++ G   
Sbjct: 531 AKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 590

Query: 450 SGKGHKAVEIWKDMAK 465
           +G+  +A ++   ++K
Sbjct: 591 AGRTEEAGKLINSISK 606



 Score = 39.3 bits (90), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 43/213 (20%), Positives = 82/213 (38%), Gaps = 46/213 (21%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI     +G       VL  + +   V    ++  + +        EEA+ L   M
Sbjct: 402 TYSSLIDGLCKAGRVNHAMEVLKNVDKPDVV----TYTIVIEGLCGTDRTEEALTLLEEM 457

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEG----------------------LYHRALEFYNHI-- 180
           V++   + +V +FNSV+  + + G                       Y   LE ++    
Sbjct: 458 VNK-RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGR 516

Query: 181 ----------------VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
                            ++   N++P    F+ +I+ +C+   +D A+ +  E+  R CE
Sbjct: 517 MEIAYELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECE 575

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           P       ++DGL +  R +EA  L++ +   G
Sbjct: 576 PAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 158/512 (30%), Positives = 271/512 (52%), Gaps = 51/512 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+ LF  MV        ++ F+ +L+ I +   +   +     + N   + I  N  
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQN---LGIPHNHY 117

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+++++   CR   +  A+ +  +M     EPDI T  +L++G C   R+ EAV L+D+M
Sbjct: 118 TYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 177

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  VTFN LI+GL  + +   A  L+D M  +GC P+  TY T+++GLC +G++
Sbjct: 178 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 237

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKL---------------------------- 345
           D A+SLL +M   K   N V Y TII+GL K                             
Sbjct: 238 DLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSL 297

Query: 346 -------GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
                  GR  D +R+L  M ERK + N   +++LI    KEGK  +A KL+ +M+++  
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 357

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PN V Y++LI+G C   + DEA++I   M++  C  +  TY++L+KGF ++ +  + +E
Sbjct: 358 DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGME 417

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++++M++   V N V Y+ LI GL + G    A+ ++ +M+S G  PD++ YS ++ GLC
Sbjct: 418 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 477

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E+AL +F  +   + K +P+++TYNI++  +CK   +    DL  S+  +G  P+
Sbjct: 478 KYGKLEKALVVFEYLQ--KSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 535

Query: 579 LVTCNIFLT-----ALKEKLEA-----PQDGT 600
           ++     ++      LKE+ +A      +DGT
Sbjct: 536 VIIYTTMISGFCRKGLKEEADALFREMKEDGT 567



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 150/480 (31%), Positives = 247/480 (51%), Gaps = 26/480 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  +  +V ++     P+ + F+ ++  + ++   D  I L  +M       + YTY  
Sbjct: 65  AVALFGEMVKSRP---FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C+ ++L  A+ +L +M   G  P  VT + L+NG C    +  A  LVD M   G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ VT+NTLIHGL L     +AV+L+DRMVA  C P+  TYGT++NGL K G      
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  ME+ K   N  IY+T+I GL K    +DA  L+ +M  KG KP+   Y++LI  L
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+  +A  +L +MI      N  T++SL+  F + GK  +A +++ +M + +   N 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNI 361

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LI+G C   +L EA+ ++T M+S+ C PDVV Y+++I G C A  VEE ++LF E
Sbjct: 362 VTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFRE 421

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   +     +  TYN L+  L +  +   +  +   M+  G  PD++T +I L      
Sbjct: 422 M--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL------ 473

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                DG          L K  +      + E + +  + P   T+  +++ +C+  +++
Sbjct: 474 -----DG----------LCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVE 518



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 246/468 (52%), Gaps = 6/468 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y     + EA+ L   MV+  +   TV +FN++++ +    L+++A E    I   
Sbjct: 157 LLNGYCHGKRISEAVALVDQMVEMGYKPDTV-TFNTLIHGLF---LHNKASEAVALIDRM 212

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P+  T+  V+  +C+ G +D A+ L ++M     E ++  Y T++DGLCK   +
Sbjct: 213 VARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHM 272

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A  L ++M+  G  P   T+N LI+ LC  G    A++L+ +M  +   PN VT+N+L
Sbjct: 273 DDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSL 332

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I     +G L +A  L D M+     PN VTY ++ING     R  +  ++   M  +  
Sbjct: 333 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 392

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TLI G  K  + E+ M+L+++M ++G   NTV Y+ LI GL + G  D A++
Sbjct: 393 LPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 452

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           I  +M+++G   +  TYS L+ G  + GK  KA+ +++ + K+    N   Y+++I G+C
Sbjct: 453 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMC 512

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK+ +   ++  +  +G KP+V+ Y++MI G C  G  EEA  LF EM   E  + PD
Sbjct: 513 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK--EDGTLPD 570

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
              YN L+ A  +  + + S +L+  M   G   D  T ++ +  L +
Sbjct: 571 SGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 618



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 235/477 (49%), Gaps = 11/477 (2%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANS---GDFKSLEMVLYRMRREKRVV 116
           +S+ P +  +     KLG Y+    T  SL+  Y +     +  +L   +  M  +   V
Sbjct: 129 RSQLPLALAVLGKMMKLG-YEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTV 187

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
              + I     + KA    EA+ L   MV    C+  + ++ +V+N + + G    AL  
Sbjct: 188 TFNTLIHGLFLHNKA---SEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSL 243

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
              +   K   I  N + +N +I  +C+   +D+A  LF +M  +  +PD++TY +L+  
Sbjct: 244 LKKMEKGK---IEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC   R  +A  LL +M      P  VTFN LI+   K G+L  A KL D M  +   PN
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VTYN+LI+G C+   LD+A  +   MV+  C+P+ VTY T+I G  K  R  +G  +  
Sbjct: 361 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFR 420

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +R    N   Y+TLI GLF+ G  + A K++K+M+  G  P+ + YS L+DGLC+ G
Sbjct: 421 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 480

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K ++A  +   +  +    N +TY+ +++G  ++GK     +++  ++      N + Y+
Sbjct: 481 KLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 540

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +I G C  G   EA  ++ +M   G  PD   Y+++I      G    + +L  EM
Sbjct: 541 TMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 597



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 214/419 (51%), Gaps = 14/419 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +++      GD      +L +M +   E  VV+  + I       K   +++A  LF
Sbjct: 223 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTII---DGLCKYKHMDDAFDLF 279

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           + M +    K  V ++NS+++ +   G +  A    + ++  K   I PN +TFN +I  
Sbjct: 280 NKM-ETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERK---INPNVVTFNSLIDA 335

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G +  A +LF EM  R+ +P+I TY +L++G C  +RLDEA  +   M    C P 
Sbjct: 336 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 395

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+N LI G CK   +    +L   M  +G + N VTYNTLI GL   G+ D A  +  
Sbjct: 396 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 455

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +MV+    P+ +TY  +++GL K G+      V   +++ K   N Y Y+ +I G+ K G
Sbjct: 456 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAG 515

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K ED   L+  +  KG KPN ++Y+ +I G CR G  +EA+ +  EM  +G   ++  Y+
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYN 575

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +L++     G    + E+ K+M     V +    S++I+ L  DG+L ++   + +MLS
Sbjct: 576 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS---YLEMLS 630



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 213/463 (46%), Gaps = 53/463 (11%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D+A+ LF EM      P I  +  L+  + K N+ D  + L ++MQ  G      T+++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L+N  C+  +L  A  ++  M   G  P+ VT ++L++G C    + +AV+L+D+MV   
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+ VT+                                   +TLI GLF   KA +A+
Sbjct: 182 YKPDTVTF-----------------------------------NTLIHGLFLHNKASEAV 206

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L  +M+ +GC+P+   Y  +++GLC+ G  D A  +L +M      AN   Y++++ G 
Sbjct: 207 ALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGL 266

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            +      A +++  M       +   Y+ LI  LC  G+  +A  + + M+ R   P+V
Sbjct: 267 CKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNV 326

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V ++S+I      G + EA KLF+EM  ++    P++ TYN L+N  C    +  +  + 
Sbjct: 327 VTFNSLIDAFAKEGKLIEAEKLFDEM--IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFK 612
             M+ + C PD+VT N  +     K +  ++G +   E++ R               LF+
Sbjct: 385 TLMVSKDCLPDVVTYNTLIKGFC-KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQ 443

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                   KI + M+   + P   T+  ++  LC+  +++ A+
Sbjct: 444 AGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 486


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 172/596 (28%), Positives = 272/596 (45%), Gaps = 95/596 (15%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E   I +F++         A+ L   +   F    + +S+N+VL    +   +   L  Y
Sbjct: 104 ESLLIPLFRSLAPG----RALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLY 159

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
             +V+     + P T TF++  + +CRLG  D A+ + R M    C PD   Y T++  L
Sbjct: 160 RRMVHRDR--VPPTTFTFSIAARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHAL 217

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           C +  ++EA  LLDEM + GC     TFN +++GLC  G L  AA+LVD M ++GC+PN 
Sbjct: 218 CAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNA 277

Query: 298 VTYNTLIHGLCLK-------------------------------GNLDKAVSLLDRMVAS 326
           +TY  L+ GLCL                                G L +A  L + M + 
Sbjct: 278 ITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSK 337

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG----- 381
            C P+  TY  +I+GL KLGR     ++L  ME++ F  +   Y+ L+    + G     
Sbjct: 338 GCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNI 397

Query: 382 ------------------------------KAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
                                         + +DAM+  ++M  +G KP+   Y+ +I  
Sbjct: 398 RAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYH 457

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC   + +EAE +   +++ G  ANA TY++L+     +G    A+ +  DM  + C  +
Sbjct: 458 LCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLD 517

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V Y+ LI  LC DG +  + M+ ++M  +G KP+ V+Y+ +I  LC    V +AL+L  
Sbjct: 518 IVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSK 577

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           EML  E    PD+ TYN L+N LCK   +  +++LL  + +     D++T NI L +   
Sbjct: 578 EMLNQE--LTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNI-LISWHC 634

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           K     D +  LN        R  TSG            ++P   TW  +VQ   R
Sbjct: 635 KARLLHDASMLLN--------RAVTSG------------ITPNERTWGIMVQNFVR 670



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 176/368 (47%), Gaps = 2/368 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N + FN VI      G +  A +L+  M  + C PD +TY  L+ GLCK  RL  A+ LL
Sbjct: 307 NVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLL 366

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+  G  P+ VT+ +L++  C+NG       +++ M  KG   N   YN +I  +C  
Sbjct: 367 REMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKD 426

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             +D A+  +  M +    P+  TY TII  L    +  +   +  ++       N   Y
Sbjct: 427 RRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITY 486

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI  L + G  +DA+ L   M+  GC  + V Y+ LI  LCR G  D +  +L EM  
Sbjct: 487 NTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAE 546

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N  +Y+ L+    ++ +   A+E+ K+M       + V Y+ LI+GLC+ G +  
Sbjct: 547 KGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHA 606

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  ++ +     D++ Y+ +I   C A  + +A  L N    +     P+  T+ I+
Sbjct: 607 ALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNR--AVTSGITPNERTWGIM 664

Query: 551 LNALCKQS 558
           +    ++S
Sbjct: 665 VQNFVRKS 672



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 144/296 (48%), Gaps = 4/296 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L+  +  +G + ++  +L  M  +   +  + +  +  A  K   +++A+R    M
Sbjct: 380 TYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEM 439

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             + + K  + ++N+++  +        A   + +++   H  ++ N +T+N +I  + R
Sbjct: 440 KSQGY-KPDICTYNTIIYHLCNNNQMEEAEYLFENLL---HEGVVANAITYNTLIHALLR 495

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G   +AI L  +M +  C  DI +Y  L+  LC++  +D +++LL EM   G  P  V+
Sbjct: 496 NGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVS 555

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N+LI+ LCK   +  A +L   M  +   P+ VTYNTLI+GLC  G +  A++LL+++ 
Sbjct: 556 YNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLH 615

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
                 + +TY  +I+   K     D + +L          NE  +  ++    ++
Sbjct: 616 NEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRK 671


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 149/474 (31%), Positives = 258/474 (54%), Gaps = 21/474 (4%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ--------EGLYHR 172
           F  + K+  + +L+ +A+ + + +   +     V S+N++L+ +I+        EG++  
Sbjct: 135 FDLVVKSCARVNLINKALSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
            +E            + PN  T+N++I+  C  G ++  +  F EM    C P++ TY T
Sbjct: 194 MVE----------SGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNT 243

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           ++D  CK  ++ EA  LL  M + G  P  +++NV+INGLC+ G++   +++++ M  + 
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +P+ VT+NTLI+G C  GN  +A+ L   MV +   PN VTY T+IN + K G      
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
             L  M +R  H N   Y+TLI G  ++G  + A ++ K+M+E G  P  + Y+ALI+G 
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C +G+ ++A  +L EMI  G   +  +YS+++ GF  + +  KA ++  +M       + 
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             YS LI GLC+  +L E   ++ +MLS G  PD V Y+S+I+  C  G +++AL+L +E
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           M  ++    PD+ TYN+L+N   KQS    +  LL  ++     P+ +T N  +
Sbjct: 544 M--IQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 145/447 (32%), Positives = 236/447 (52%), Gaps = 8/447 (1%)

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLG 206
           + CK +   F+ V+    +  L ++AL     IVN AK    +P  L++N ++  V R  
Sbjct: 126 YQCKSSSAVFDLVVKSCARVNLINKALS----IVNLAKSYGFMPGVLSYNAILDAVIRTK 181

Query: 207 L-VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
             V  A  +F+EM      P++YTY  L+ G C    L+  +    EM+ +GC P  VT+
Sbjct: 182 QSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTY 241

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N +I+  CK  ++G A KL+  M LKG  PN ++YN +I+GLC +G + +   +L+ M  
Sbjct: 242 NTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSK 301

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
            + +P+ VT+ T+ING   +G       +   M +     N   Y+TLI+ + K G    
Sbjct: 302 RRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNR 361

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           AM+   QM ++G  PN   Y+ LIDG  + G   +A +I+ EM+ NG      TY++L+ 
Sbjct: 362 AMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G    G+   A  + ++M +   + + V YS +I G C + +L +A  +  +M+++G  P
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           DV  YSS+I GLC    + E   LF EML L     PD  TY  L+NA C + ++  ++ 
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSL--GLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEK 592
           L + M+ +G  PD+VT N+ +    ++
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQ 566



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/407 (31%), Positives = 208/407 (51%), Gaps = 17/407 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +++N+VI  +CR G +    ++  EM  R   PD  T+ TL++G C      +A++L
Sbjct: 271 PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVL 330

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM  +G  P  VT+  LIN +CK G L RA + +D M  +G  PN  TY TLI G   
Sbjct: 331 HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQ 390

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G L +A  ++  MV +   P  +TY  +ING   LGR  D + +L  M ER F  +   
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YST+ISG  +  + E A +L  +M+ KG  P+   YS+LI GLC+  +  E  ++  EM+
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   +  TY+SL+  +   G   KA+ +  +M +     + V Y+VLI+G  +  + +
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMI---------------HGLCNAGSVEEALKLFNEML 534
           EA+ +  ++L     P+ + Y+++I                G C  G + EA ++   ML
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML 630

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
               K   +V  YN++++   K  NI  + +L   M+  G  P  VT
Sbjct: 631 QKGYKLNEEV--YNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 224/454 (49%), Gaps = 27/454 (5%)

Query: 144 MVDEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +++E   +R V    +FN+++N     G +H+AL  +  +V      + PN +T+  +I 
Sbjct: 295 ILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKN---GLSPNVVTYTTLIN 351

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
           ++C+ G ++ A++   +M  R   P+  TY TL+DG  ++  L +A  ++ EM  +G  P
Sbjct: 352 SMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTP 411

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           T +T+N LING C  G +  A+ L+  M  +G +P+ V+Y+T+I G C    L+KA  L 
Sbjct: 412 TIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLK 471

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             MVA    P+  TY ++I GL K  R  +   +   M       +E  Y++LI+    E
Sbjct: 472 VEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIE 531

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G  + A++L  +M++KG  P+ V Y+ LI+G  +  +  EA+ +L +++      N  TY
Sbjct: 532 GDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITY 591

Query: 441 SSL---------------MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
           ++L               MKGF   G  ++A  + + M +     NE  Y+V+IHG  + 
Sbjct: 592 NTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKV 651

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--QPD 543
           G + +A  ++ +ML  G  P  V   ++   L + G   E     N++L    KS    +
Sbjct: 652 GNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE----LNQLLDYTLKSCRITE 707

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
                +L+    K+ N+    ++L  M   G  P
Sbjct: 708 AALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 212/474 (44%), Gaps = 62/474 (13%)

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
           HI+    +     +L   +V+ TV   G  ++  Q  +      C+     +  ++    
Sbjct: 87  HILTRYKLYKTAQSLAEEVVVNTVDETG--EDLFQCLKN-SYYQCKSSSAVFDLVVKSCA 143

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK-LVDNMFLKGCLPNE 297
           + N +++A+ +++  +  G  P  +++N +++ + +  +  + A+ +   M   G  PN 
Sbjct: 144 RVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNV 203

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
            TYN LI G C  GNL+  +     M  + C+PN VTY TII+   KL            
Sbjct: 204 YTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLR----------- 252

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
                                   K  +A KL + M  KG  PN + Y+ +I+GLCR G+
Sbjct: 253 ------------------------KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             E  EIL EM       +  T+++L+ G+   G  H+A+ +  +M KN    N V Y+ 
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI+ +C+ G L  A     QM  RG  P+   Y+++I G    G +++A ++  EM+  E
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV--E 406

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               P + TYN L+N  C    +  +  LL  M++RG  PD+V+ +  ++          
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF-------- 458

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                         + Q     F++   M+ K +SP  +T+  ++Q LC+ +R+
Sbjct: 459 -------------CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 209/444 (47%), Gaps = 25/444 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI  Y N G+F    ++   M +        ++  +  +  KA  +  A+     M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D        +++ ++++   Q+G   +A +    +V        P  +T+N +I   C 
Sbjct: 370 RDR-GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVEN---GFTPTIITYNALINGHCI 425

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           LG +++A  L +EM  R   PD+ +Y T++ G C+   L++A  L  EM   G  P   T
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LI GLCK   LG    L   M   G  P+EVTY +LI+  C++G+LDKA+ L D M+
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS--------- 375
                P+ VTY  +ING  K  R  +  R+L+ +   +   NE  Y+TLI          
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKS 605

Query: 376 ------GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
                 G   +G   +A ++ + M++KG K N  VY+ +I G  +VG  ++A  +  EM+
Sbjct: 606 ALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL-CEDGKL 488
           ++G A ++ T  +L K  +  GK  +  ++  D    +C   E   + ++ G+  ++G +
Sbjct: 666 HSGFAPHSVTIMALAKSLYHEGKEVELNQLL-DYTLKSCRITEAALAKVLIGINSKEGNM 724

Query: 489 REARMVWTQMLSRGCKPDVVAYSS 512
                V   M   G  P    YSS
Sbjct: 725 DAVFNVLKDMALSGLLP----YSS 744



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 24/259 (9%)

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           CK ++ V+  ++    RV   ++A  I+    + G      +Y++++     + +  K  
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 458 E-IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           E I+K+M ++    N   Y++LI G C  G L      + +M   GC P+VV Y+++I  
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDA 247

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C    + EA KL   M        P++ +YN+++N LC++  +  + ++L  M  R   
Sbjct: 248 YCKLRKIGEAFKLLRLMAL--KGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           PD VT N  +           +  +F   L +                 M++  LSP   
Sbjct: 306 PDRVTFNTLINGY-------CNVGNFHQALVLH--------------AEMVKNGLSPNVV 344

Query: 637 TWERVVQELCRPKRIQAAI 655
           T+  ++  +C+   +  A+
Sbjct: 345 TYTTLINSMCKAGNLNRAM 363


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 153/397 (38%), Positives = 236/397 (59%), Gaps = 4/397 (1%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N+V+K +CR G V  A+ L REM  ++  PDI +Y TL++GLCK  +L EAV LL EM+
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             GCFP  VT   L++GLCK+G +  A +L++ M  KG   + V Y TLI G C  GNLD
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +   L D M+      N VTY  +++GL +LG+  +   VL +M E   H +   Y+ LI
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            GL K+G+A  AM L   M+EKG +P+ V Y+ L+ GLC+ G   +A +IL  MI  G  
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN-NCVY-NEVCYSVLIHGLCEDGKLREAR 492
           A+  TY++LMKG  + GK  +A++++  M  N NC+  N   +++LI GLC++G+L +A 
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M+ +G   ++V Y+ ++ G   AG ++EA++L+ ++L L     P+ FTY+IL++
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDL--GFVPNSFTYSILID 358

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             CK   ++ +  L   M   G +P L   N  + +L
Sbjct: 359 GFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASL 395



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 148/402 (36%), Positives = 222/402 (55%), Gaps = 4/402 (0%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           ++ P+ +++N +I  +C+   +  A+ L  EM    C P+  T  TLMDGLCK+ R+DEA
Sbjct: 28  SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEA 87

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + LL+ M+  G     V +  LI+G C NG L R  +L D M  KG   N VTY+ L+HG
Sbjct: 88  MELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHG 147

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC  G   +A ++L+ M      P+ VTY  +I+GL K GRA     +L  M E+    +
Sbjct: 148 LCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPS 207

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+ L+SGL KEG   DA K+ + M+EKG K + V Y+ L+ GLC  GK DEA ++  
Sbjct: 208 NVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFN 267

Query: 427 EMINN-GC-AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
            M +N  C   N FT++ L+ G  + G+  KAV+I + M K     N V Y++L+ G  +
Sbjct: 268 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 327

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            GK++EA  +W Q+L  G  P+   YS +I G C    +  A  LF EM        P +
Sbjct: 328 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM--RTHGLNPAL 385

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           F YN L+ +LCK+ ++  +  L   M +  C+PD+++ N  +
Sbjct: 386 FDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMI 427



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 225/495 (45%), Gaps = 43/495 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA+ L   M  +      V  + ++++     G   R  E ++ ++      I  N +
Sbjct: 84  MDEAMELLEAMKKKGF-DADVVLYGTLISGFCNNGNLDRGKELFDEMLGK---GISANVV 139

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T++ ++  +CRLG    A  +   M      PD+ TY  L+DGLCK+ R   A+ LL+ M
Sbjct: 140 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 199

Query: 254 QVDGCFPTPVTFNVLINGLCKNG-------------ELGRAAKLVD-NMFLKG------- 292
              G  P+ VT+NVL++GLCK G             E G+ A +V  N  +KG       
Sbjct: 200 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 259

Query: 293 ---------------CL-PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
                          CL PN  T+N LI GLC +G L KAV +  +MV      N VTY 
Sbjct: 260 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 319

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++ G +K G+  +   +   + +  F  N + YS LI G  K      A  L+ +M   
Sbjct: 320 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 379

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P    Y+ L+  LC+ G  ++A+ +  EM N  C  +  ++++++ G  ++G     
Sbjct: 380 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 439

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            E+   M +     + + +S LI+ L + G+L EA+    +M++ G  PD + Y S++ G
Sbjct: 440 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           L + G   E + L ++M      +  D    + +L  LC        ++LL +      +
Sbjct: 500 LSSKGDTTEIINLLHQMAA--KGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSE 557

Query: 577 PDLVTCNIFLTALKE 591
              ++CN  L  L +
Sbjct: 558 GASISCNELLMQLHQ 572



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 159/318 (50%), Gaps = 21/318 (6%)

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           ++ GL + G   +   ++  M  +    +   Y+TLI+GL K  K ++A+ L  +M   G
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           C PN+V  + L+DGLC+ G+ DEA E+L  M   G  A+   Y +L+ GF  +G   +  
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E++ +M       N V YS L+HGLC  G+ +EA  V   M   G  PDVV Y+ +I GL
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C  G    A+ L N M+  E   +P   TYN+LL+ LCK+  +  +  +L  M+++G   
Sbjct: 184 CKDGRATHAMDLLNLMV--EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           D+VT N  +  L +K +  +         A++LF     +          +  L P   T
Sbjct: 242 DVVTYNTLMKGLCDKGKVDE---------ALKLFNSMFDN----------ENCLEPNVFT 282

Query: 638 WERVVQELCRPKRIQAAI 655
           +  ++  LC+  R+  A+
Sbjct: 283 FNMLIGGLCKEGRLTKAV 300



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 185/401 (46%), Gaps = 6/401 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L+      G +K    VL  M          ++  +     K      A+ L + M
Sbjct: 140 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 199

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V++      V ++N +L+ + +EGL   A +    ++         + +T+N ++K +C 
Sbjct: 200 VEKGEEPSNV-TYNVLLSGLCKEGLVIDAFKILRMMIEKGKK---ADVVTYNTLMKGLCD 255

Query: 205 LGLVDNAIQLFREM-PVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            G VD A++LF  M    NC EP+++T+  L+ GLCKE RL +AV +  +M   G     
Sbjct: 256 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 315

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N+L+ G  K G++  A +L   +   G +PN  TY+ LI G C    L+ A  L   
Sbjct: 316 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 375

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M      P    Y T++  L K G       +   M       +   ++T+I G  K G 
Sbjct: 376 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 435

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +   +L  +M+E G +P+ + +S LI+ L ++G+ DEA+  L  M+ +G   +A  Y S
Sbjct: 436 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 495

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           L+KG    G   + + +   MA    V +    S ++  LC
Sbjct: 496 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  266 bits (679), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 157/523 (30%), Positives = 273/523 (52%), Gaps = 9/523 (1%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           IF+S  +   Y      F+ +++   +      +  ++  +R +K    E   + + KAY
Sbjct: 29  IFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCPEDVALTVIKAY 88

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            K  + ++A+ +F  M + F C+  ++S+NS+LN +I+   +  A  F+ +    + M +
Sbjct: 89  AKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF---ETMGL 145

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN  T+N++IK  CR    D A +L   M  +   PD+++Y TL++ L K   + +A+ 
Sbjct: 146 SPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALK 205

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHG 306
           L DEM   G  P    +N+LI+G  K G++  A+++ + + LKG    PN  +YN +I+G
Sbjct: 206 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL-LKGPSVYPNIPSYNVMING 264

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC  G  D++  +  RM  ++   +  TY T+I+GL   G      RV   M E     +
Sbjct: 265 LCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPD 324

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             +Y+T+++G  + G+ E+ ++LWK M ++GC+   V Y+ LI GL    K DEA  I  
Sbjct: 325 VVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWE 383

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            +    C A++ TY  L+ G  ++G  +KA+ I ++        +   YS +I+GLC +G
Sbjct: 384 LLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREG 443

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           +L E   V  QM   GCKP+    +++I+G   A  +E+AL+ F  M  +     P V T
Sbjct: 444 RLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM--VSKGCFPTVVT 501

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           YN L+N L K    S +  L+  M+ +G  P+++T ++ +  L
Sbjct: 502 YNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 244/474 (51%), Gaps = 20/474 (4%)

Query: 62  EQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS- 120
           EQ FS ++F              ++ +LI   A +G + S  + L+    E+ V  + + 
Sbjct: 177 EQGFSPDVF--------------SYGTLINSLAKNG-YMSDALKLFDEMPERGVTPDVAC 221

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +   + K   +  A  ++  ++        + S+N ++N + + G +  + E ++ +
Sbjct: 222 YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +    L    T++ +I  +C  G +D A ++++EM      PD+  Y T+++G  + 
Sbjct: 282 KKNERGQDL---YTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            R++E + L   M+ +GC  T V++N+LI GL +N ++  A  + + +  K C  + +TY
Sbjct: 339 GRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 397

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
             L+HGLC  G L+KA+S+L+     +   +   Y ++INGL + GR  + A VL  M +
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                N ++ + +I+G  +  K EDA++ +  M+ KGC P  V Y+ LI+GL +  +  E
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSE 517

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  ++ EM++ G   N  TYS LM G  +  K   A+ +W    +     +   ++++IH
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIH 577

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           GLC  GK+ +A  ++++M  R C P++V +++++ G       E A K+++ +L
Sbjct: 578 GLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHIL 631



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 245/551 (44%), Gaps = 62/551 (11%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           V+ ++  E   H AL  ++ +      +  P    F+ ++K +    LV +  ++   + 
Sbjct: 13  VIKLLKSEKNPHSALSIFDSVTRFPGYSHTP--YVFHHILKRLFDPKLVAHVSRIVELIR 70

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGEL 278
            + C+       T++    K +  D+A+ +   M ++ GC P   ++N L+N L ++ + 
Sbjct: 71  TQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKW 130

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A          G  PN  TYN LI   C K   DKA  LL+ M      P+  +YGT+
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME-KG 397
           IN L K G   D  ++   M ER    +   Y+ LI G FK+G   +A ++W+++++   
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILF------------------------------- 426
             PN   Y+ +I+GLC+ GK DE+ EI                                 
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310

Query: 427 ----EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
               EM  NG + +   Y++++ G+  +G+  + +E+WK M K  C    V Y++LI GL
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGL 369

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            E+ K+ EA  +W  +  + C  D + Y  ++HGLC  G + +AL +  E      +   
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE--AENGRGDL 427

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGT 600
           D F Y+ ++N LC++  +     +L+ M   GC P+   CN  +       KLE   D  
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLE---DAL 484

Query: 601 DFL---------------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            F                N L   L K +R S  + +V+ ML K   P   T+  ++  L
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544

Query: 646 CRPKRIQAAIN 656
           C+ K++  A+N
Sbjct: 545 CQGKKLDMALN 555



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 189/383 (49%), Gaps = 9/383 (2%)

Query: 67  DEIFNSTPKLGSYQLGDS--TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           DE F    ++   + G    T+ +LI     SG+      V   M           +  +
Sbjct: 272 DESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 331

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
              Y +A  +EE + L+  M  E  C RTV S+N ++  + +      A+  +  +    
Sbjct: 332 LNGYLRAGRIEECLELWKVMEKE-GC-RTVVSYNILIRGLFENAKVDEAISIWELL---P 386

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
             +   +++T+ +++  +C+ G ++ A+ +  E      + D + Y ++++GLC+E RLD
Sbjct: 387 EKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLD 446

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           E   +LD+M   GC P P   N +ING  +  +L  A +   NM  KGC P  VTYNTLI
Sbjct: 447 EVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLI 506

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME-ERKF 363
           +GL       +A +L+  M+     PN +TY  ++NGL + G+ +D A  L     E+ F
Sbjct: 507 NGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ-GKKLDMALNLWCQALEKGF 565

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +  +++ +I GL   GK EDA++L+ +M ++ C PN V ++ L++G  +V   + A +
Sbjct: 566 KPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASK 625

Query: 424 ILFEMINNGCAANAFTYSSLMKG 446
           I   ++ +  ++N +      +G
Sbjct: 626 IWDHILQSWSSSNCYYMEHTCQG 648


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 160/512 (31%), Positives = 267/512 (52%), Gaps = 51/512 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+ LF  MV        V+ FN +L+ I +   +   +     + N   + I  +  
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVE-FNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLY 116

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N++I   CR   +  A+ +  +M     EPDI T  +L++G C   R+ EAV L+D+M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
            V    P  VTFN LI+GL  + +   A  L+D M  +GC P+  TY T+++GLC +G++
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236

Query: 314 DKAVSLLDRMVASKC-----------------------------------MPNEVTYGTI 338
           D A+SLL +M   K                                     PN VTY ++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I  L   GR  D +R+L  M ERK + N   +S LI    KEGK  +A KL+ +M+++  
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+   YS+LI+G C   + DEA+ +   MI+  C  N  TY++L+KGF ++ +  + +E
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++++M++   V N V Y+ LI GL + G    A+ ++ +M+S G  PD++ YS ++ GLC
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E+AL +F  +   + K +PD++TYNI++  +CK   +    DL  S+  +G  P+
Sbjct: 477 KYGKLEKALVVFEYLQ--KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534

Query: 579 LVTCNIFLT-----ALKEKLEA-----PQDGT 600
           ++     ++      LKE+ +A      +DGT
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGT 566



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 247/480 (51%), Gaps = 26/480 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ +  +V ++    LP+ + FN ++  + ++   D  I L   M       D+Y+Y  
Sbjct: 64  AVDLFGEMVQSRP---LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C+ ++L  A+ +L +M   G  P  VT + L+NG C    +  A  LVD MF+  
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN VT+NTLIHGL L     +AV+L+DRMVA  C P+  TYGT++NGL K G      
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  ME+ K   +  IY+T+I  L       DA+ L+ +M  KG +PN V Y++LI  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+  +A  +L +MI      N  T+S+L+  F + GK  +A +++ +M K +   + 
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             YS LI+G C   +L EA+ ++  M+S+ C P+VV Y+++I G C A  VEE ++LF E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   +     +  TYN L+  L +  +   +  +   M+  G  PD++T +I L      
Sbjct: 421 M--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL------ 472

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                DG          L K  +      + E + +  + P   T+  +++ +C+  +++
Sbjct: 473 -----DG----------LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 210/403 (52%), Gaps = 2/403 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M   PNT+TFN +I  +        A+ L   M  R C+PD++TY T+++GLCK   +D 
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ LL +M+        V +  +I+ LC    +  A  L   M  KG  PN VTYN+LI 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
            LC  G    A  LL  M+  K  PN VT+  +I+  VK G+ V+  ++   M +R    
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS+LI+G     + ++A  +++ M+ K C PN V Y+ LI G C+  + +E  E+ 
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM   G   N  TY++L++G F++G    A +I+K M  +    + + YS+L+ GLC+ 
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           GKL +A +V+  +     +PD+  Y+ MI G+C AG VE+   LF  +     K  P+V 
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK--PNVI 536

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            Y  +++  C++     +  L   M + G  P+  T N  + A
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 232/477 (48%), Gaps = 11/477 (2%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANS---GDFKSLEMVLYRMRREKRVV 116
           +S+ P +  +     KLG Y+    T  SL+  Y +     +  +L   ++ M  +   V
Sbjct: 128 RSQLPLALAVLGKMMKLG-YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
              + I     + KA    EA+ L   MV    C+  + ++ +V+N + + G    AL  
Sbjct: 187 TFNTLIHGLFLHNKA---SEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSL 242

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
              +   K   I  + + +  +I  +C    V++A+ LF EM  +   P++ TY +L+  
Sbjct: 243 LKKMEKGK---IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC   R  +A  LL +M      P  VTF+ LI+   K G+L  A KL D M  +   P+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             TY++LI+G C+   LD+A  + + M++  C PN VTY T+I G  K  R  +G  +  
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +R    N   Y+TLI GLF+ G  + A K++K+M+  G  P+ + YS L+DGLC+ G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K ++A  +   +  +    + +TY+ +++G  ++GK     +++  ++      N + Y+
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +I G C  G   EA  ++ +M   G  P+   Y+++I      G    + +L  EM
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 213/416 (51%), Gaps = 8/416 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +++      GD      +L +M + K       +  I  A      V +A+ LF  M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D    +  V ++NS++  +   G +  A    + ++  K   I PN +TF+ +I    +
Sbjct: 282 -DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVK 337

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A +L+ EM  R+ +PDI+TY +L++G C  +RLDEA  + + M    CFP  VT
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI G CK   +    +L   M  +G + N VTYNTLI GL   G+ D A  +  +MV
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    P+ +TY  +++GL K G+      V   +++ K   + Y Y+ +I G+ K GK E
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           D   L+  +  KG KPN ++Y+ +I G CR G  +EA+ +  EM  +G   N+ TY++L+
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +     G    + E+ K+M     V +    S++I+ L  DG+L ++   + +MLS
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS---YLEMLS 629



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 190/416 (45%), Gaps = 62/416 (14%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +LD+AV L  EM      P+ V FN L++ + K  +      L + M       +  +YN
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI+  C +  L  A+++L +M+     P+ VT  +++NG                    
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG-------------------- 159

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
                 Y +   IS         +A+ L  QM     +PNTV ++ LI GL    K  EA
Sbjct: 160 ------YCHGKRIS---------EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             ++  M+  GC  + FTY +++ G  + G    A+ + K M K     + V Y+ +I  
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC    + +A  ++T+M ++G +P+VV Y+S+I  LCN G   +A +L ++M  +E K  
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERKIN 322

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDG 599
           P+V T++ L++A  K+  +  +  L + M+ R  DPD+ T +  +    + ++L+  +  
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK-- 380

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                                 + E+M+ K   P   T+  +++  C+ KR++  +
Sbjct: 381 ---------------------HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 162/534 (30%), Positives = 279/534 (52%), Gaps = 11/534 (2%)

Query: 60  KSEQ-PFSD-EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL 117
           KSE+ P S   IF+S  +   Y      F+ +++   +      +  ++  +R +K    
Sbjct: 18  KSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCP 77

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E   + + KAY K  + ++A+ +F  M + F C+  ++S+NS+LN +I+   +  A  F+
Sbjct: 78  EDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF 137

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
            +    + M + PN  T+N++IK  CR    D A +L   M  +   PD+++Y TL++ L
Sbjct: 138 LYF---ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSL 194

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLP 295
            K   + +A+ L DEM   G  P    +N+LI+G  K G++  A+++ + + LKG    P
Sbjct: 195 AKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL-LKGPSVYP 253

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N  +YN +I+GLC  G  D++  +  RM  ++   +  TY T+I+GL   G      RV 
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M E     +  +Y+T+++G  + G+ E+ ++LWK M ++GC+   V Y+ LI GL   
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFEN 372

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            K DEA  I   +    C A++ TY  L+ G  ++G  +KA+ I ++        +   Y
Sbjct: 373 AKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 432

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           S +I+GLC +G+L E   V  QM   GCKP+    +++I+G   A  +E+AL+ F  M  
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM-- 490

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +     P V TYN L+N L K    S +  L+  M+ +G  P+++T ++ +  L
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 274/529 (51%), Gaps = 22/529 (4%)

Query: 62  EQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS- 120
           EQ FS ++F              ++ +LI   A +G + S  + L+    E+ V  + + 
Sbjct: 177 EQGFSPDVF--------------SYGTLINSLAKNG-YMSDALKLFDEMPERGVTPDVAC 221

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +   + K   +  A  ++  ++        + S+N ++N + + G +  + E ++ +
Sbjct: 222 YNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRM 281

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +    L    T++ +I  +C  G +D A ++++EM      PD+  Y T+++G  + 
Sbjct: 282 KKNERGQDL---YTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRA 338

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            R++E + L   M+ +GC  T V++N+LI GL +N ++  A  + + +  K C  + +TY
Sbjct: 339 GRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTY 397

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
             L+HGLC  G L+KA+S+L+     +   +   Y ++INGL + GR  + A VL  M +
Sbjct: 398 GVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTK 457

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                N ++ + +I+G  +  K EDA++ +  M+ KGC P  V Y+ LI+GL +  +  E
Sbjct: 458 HGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSE 517

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  ++ EM++ G   N  TYS LM G  +  K   A+ +W    +     +   ++++IH
Sbjct: 518 AYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIH 577

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           GLC  GK+ +A  ++++M  R C P++V +++++ G       E A K+++ +L   P  
Sbjct: 578 GLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGP-- 635

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           QPD+ +YNI L  LC    IS ++  LN  +DRG  P  +T NI + A+
Sbjct: 636 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVRAV 684



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 145/551 (26%), Positives = 245/551 (44%), Gaps = 62/551 (11%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           V+ ++  E   H AL  ++ +      +  P    F+ ++K +    LV +  ++   + 
Sbjct: 13  VIKLLKSEKNPHSALSIFDSVTRFPGYSHTP--YVFHHILKRLFDPKLVAHVSRIVELIR 70

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGEL 278
            + C+       T++    K +  D+A+ +   M ++ GC P   ++N L+N L ++ + 
Sbjct: 71  TQKCKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKW 130

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A          G  PN  TYN LI   C K   DKA  LL+ M      P+  +YGT+
Sbjct: 131 DEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTL 190

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME-KG 397
           IN L K G   D  ++   M ER    +   Y+ LI G FK+G   +A ++W+++++   
Sbjct: 191 INSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPS 250

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILF------------------------------- 426
             PN   Y+ +I+GLC+ GK DE+ EI                                 
Sbjct: 251 VYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGAT 310

Query: 427 ----EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
               EM  NG + +   Y++++ G+  +G+  + +E+WK M K  C    V Y++LI GL
Sbjct: 311 RVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGL 369

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            E+ K+ EA  +W  +  + C  D + Y  ++HGLC  G + +AL +  E      +   
Sbjct: 370 FENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE--AENGRGDL 427

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGT 600
           D F Y+ ++N LC++  +     +L+ M   GC P+   CN  +       KLE   D  
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLE---DAL 484

Query: 601 DFL---------------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            F                N L   L K +R S  + +V+ ML K   P   T+  ++  L
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544

Query: 646 CRPKRIQAAIN 656
           C+ K++  A+N
Sbjct: 545 CQGKKLDMALN 555



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 221/450 (49%), Gaps = 12/450 (2%)

Query: 74  PKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHL 133
           P + SY +       +I      G F     + +RM++ +R     ++  +      +  
Sbjct: 253 PNIPSYNV-------MINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGN 305

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++ A R++  M  E      V  +N++LN  ++ G     LE +  +       ++    
Sbjct: 306 LDGATRVYKEMA-ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV---- 360

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N++I+ +     VD AI ++  +P ++C  D  TY  L+ GLCK   L++A+ +L+E 
Sbjct: 361 SYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEA 420

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +          ++ +INGLC+ G L   A ++D M   GC PN    N +I+G      L
Sbjct: 421 ENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKL 480

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           + A+     MV+  C P  VTY T+INGL K  R  +   ++  M  + +  N   YS L
Sbjct: 481 EDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLL 540

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ++GL +  K + A+ LW Q +EKG KP+  +++ +I GLC  GK ++A ++  EM    C
Sbjct: 541 MNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKC 600

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  T+++LM+GF++     +A +IW  + +     + + Y++ + GLC   ++ +A  
Sbjct: 601 VPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVG 660

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
                + RG  P  + ++ ++  + + G++
Sbjct: 661 FLNDAVDRGVLPTAITWNILVRAVLDNGAL 690


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 159/518 (30%), Positives = 259/518 (50%), Gaps = 40/518 (7%)

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
           MR   R   E + + +  A+ +A + + A+  F  +     C   V+S N++L+  ++  
Sbjct: 75  MRHRPRFS-ESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRAR 133

Query: 169 LYHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
            Y  A  F+  + + A    I PN  T+N++++++C  G VD A+ LF  +  R   PD 
Sbjct: 134 RYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDR 193

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            TY TLM GL K ++LD A+ LLDEM   G     V +N L++G  + G   +A K+ + 
Sbjct: 194 VTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQ 253

Query: 288 MFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
           +    G  PN  TY  ++ GLC  G   +A  +  RM+A+    + VTYG +I+GL + G
Sbjct: 254 LVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSG 313

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ-------------M 393
                ARV   M +    ++  +Y++LI G  + G+  +A K W               +
Sbjct: 314 DVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNI 373

Query: 394 MEKG----------------------CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           M KG                      C P+ V +  LI GLC  G  + A EIL +  N+
Sbjct: 374 MTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNS 433

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   + F+YSS++  F + G+ H A E++K+M K+ C  N   Y+ LI+G C   K+ +A
Sbjct: 434 GEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDA 493

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++ +M S GC P ++ Y+++I GLC A   +EA  L  EM  LE   +PD+ TY  L+
Sbjct: 494 IKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEM--LERGFKPDIRTYASLI 551

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             LC+   +  ++ + + ++D G   D++  NI +  L
Sbjct: 552 RGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGL 589



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/577 (28%), Positives = 288/577 (49%), Gaps = 19/577 (3%)

Query: 31  PSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLI 90
           P  RSH    + + V + +  + +    + S   F   I    P L +Y +       ++
Sbjct: 117 PGVRSHNTL-LDAFVRARRYSDADAFFASLSHGAFGRRI---APNLQTYNI-------IL 165

Query: 91  QHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHC 150
           +     GD      +   +RR        ++  +     K   ++ A+ L   M + +  
Sbjct: 166 RSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPN-YGV 224

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           +     +N++L+   + G++ +A++ +  +V  +     PN  T+ +++  +C+LG    
Sbjct: 225 QADAVCYNALLSGCFRTGMFEKAMKVWEQLV--RDPGASPNLATYKVMLDGLCKLGRFKE 282

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A +++  M   N + D  TY  L+ GLC+   +D A  +  +M   G       +N LI 
Sbjct: 283 AGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIK 342

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV-ASKCM 329
           G C+ G  G A K  D+    G +    TYN +  GL   G + +A  LL ++   + C 
Sbjct: 343 GFCEVGRTGEAWKFWDSTGFSG-IRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCS 401

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P++VT+GT+I+GL + G A     +L         ++ + YS++I+   K+G+  DA ++
Sbjct: 402 PDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEV 461

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +K M++ GCKPN+ VY+ALI+G CRV K ++A +I  EM +NGC     TY++L+ G  +
Sbjct: 462 YKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCK 521

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           + K  +A  + K+M +     +   Y+ LI GLC D K+  A  +W ++L  G + DV+ 
Sbjct: 522 AEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMV 581

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           ++ +IHGLC+AG V+EA  ++ EM   E    P++ TYN L++   +  +I  +  L  +
Sbjct: 582 HNILIHGLCSAGKVDEAFCIYLEMK--EKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTA 639

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           ++D G  PD+VT N  +  L      P+ G   LNE+
Sbjct: 640 ILDNGLKPDIVTYNTRIKGLCSCNRTPE-GVLLLNEV 675



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 226/454 (49%), Gaps = 13/454 (2%)

Query: 72  STPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKA 131
           ++P L +Y++       ++      G FK    V  RM          ++  +     ++
Sbjct: 260 ASPNLATYKV-------MLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRS 312

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
             V+ A R++  MV +      V  +NS++    + G    A +F++    +   + +  
Sbjct: 313 GDVDSAARVYSDMV-KAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWD----STGFSGIRQ 367

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
             T+N++ K +   G+V  A +L +++    +C PD  T+ TL+ GLC+    + A  +L
Sbjct: 368 ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEIL 427

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           ++ +  G      +++ +IN  CK+G    A ++  NM   GC PN   YN LI+G C  
Sbjct: 428 EDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRV 487

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             ++ A+ +   M ++ C P  +TY T+I+GL K  +  + + +   M ER F  +   Y
Sbjct: 488 SKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTY 547

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           ++LI GL ++ K + A+++W ++++ G + + +V++ LI GLC  GK DEA  I  EM  
Sbjct: 548 ASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKE 607

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
             C+ N  TY++LM GF+E G   KA  +W  +  N    + V Y+  I GLC   +  E
Sbjct: 608 KNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPE 667

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
             ++  ++L+ G  P V+ +S ++  +   G ++
Sbjct: 668 GVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 228/508 (44%), Gaps = 67/508 (13%)

Query: 197 LVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           +V+    R  + D A+  FR++P +  C P + ++ TL+D   +  R  +A      +  
Sbjct: 88  VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLS- 146

Query: 256 DGCF-----PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            G F     P   T+N+++  LC  G++ RA  L  ++  +G  P+ VTY+TL+ GL   
Sbjct: 147 HGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKH 206

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-EERKFHVNEYI 369
             LD A+ LLD M       + V Y  +++G  + G      +V   +  +     N   
Sbjct: 207 DQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLAT 266

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y  ++ GL K G+ ++A ++W +MM    + +TV Y  LI GLCR G  D A  +  +M+
Sbjct: 267 YKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMV 326

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD--------------MAKN--------- 466
             G   +   Y+SL+KGF E G+  +A + W                M K          
Sbjct: 327 KAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSE 386

Query: 467 ------------NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
                       +C  ++V +  LIHGLCE+G    A  +     + G + DV +YSSMI
Sbjct: 387 ATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMI 446

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +  C  G   +A +++  M+  +   +P+   YN L+N  C+ S I+ +I +   M   G
Sbjct: 447 NRFCKDGRTHDANEVYKNMV--KDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNG 504

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
           C P ++T N  +  L  K E  Q+ +    E                    ML++   P 
Sbjct: 505 CCPTIITYNTLIDGLC-KAEKYQEASSLTKE--------------------MLERGFKPD 543

Query: 635 TSTWERVVQELCRPKRIQAAINKCWSNL 662
             T+  +++ LCR K++  A+ + W  +
Sbjct: 544 IRTYASLIRGLCRDKKVDVAL-RIWDEI 570


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  265 bits (678), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 160/512 (31%), Positives = 267/512 (52%), Gaps = 51/512 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+ LF  MV        V+ FN +L+ I +   +   +     + N   + I  +  
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVE-FNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLY 100

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N++I   CR   +  A+ +  +M     EPDI T  +L++G C   R+ EAV L+D+M
Sbjct: 101 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 160

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
            V    P  VTFN LI+GL  + +   A  L+D M  +GC P+  TY T+++GLC +G++
Sbjct: 161 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 220

Query: 314 DKAVSLLDRMVASKC-----------------------------------MPNEVTYGTI 338
           D A+SLL +M   K                                     PN VTY ++
Sbjct: 221 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I  L   GR  D +R+L  M ERK + N   +S LI    KEGK  +A KL+ +M+++  
Sbjct: 281 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 340

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+   YS+LI+G C   + DEA+ +   MI+  C  N  TY++L+KGF ++ +  + +E
Sbjct: 341 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 400

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++++M++   V N V Y+ LI GL + G    A+ ++ +M+S G  PD++ YS ++ GLC
Sbjct: 401 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 460

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E+AL +F  +   + K +PD++TYNI++  +CK   +    DL  S+  +G  P+
Sbjct: 461 KYGKLEKALVVFEYLQ--KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 518

Query: 579 LVTCNIFLT-----ALKEKLEA-----PQDGT 600
           ++     ++      LKE+ +A      +DGT
Sbjct: 519 VIIYTTMISGFCRKGLKEEADALFREMKEDGT 550



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 247/480 (51%), Gaps = 26/480 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ +  +V ++    LP+ + FN ++  + ++   D  I L   M       D+Y+Y  
Sbjct: 48  AVDLFGEMVQSRP---LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C+ ++L  A+ +L +M   G  P  VT + L+NG C    +  A  LVD MF+  
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN VT+NTLIHGL L     +AV+L+DRMVA  C P+  TYGT++NGL K G      
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  ME+ K   +  IY+T+I  L       DA+ L+ +M  KG +PN V Y++LI  L
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+  +A  +L +MI      N  T+S+L+  F + GK  +A +++ +M K +   + 
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             YS LI+G C   +L EA+ ++  M+S+ C P+VV Y+++I G C A  VEE ++LF E
Sbjct: 345 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 404

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   +     +  TYN L+  L +  +   +  +   M+  G  PD++T +I L      
Sbjct: 405 M--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL------ 456

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                DG          L K  +      + E + +  + P   T+  +++ +C+  +++
Sbjct: 457 -----DG----------LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 501



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 210/403 (52%), Gaps = 2/403 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M   PNT+TFN +I  +        A+ L   M  R C+PD++TY T+++GLCK   +D 
Sbjct: 163 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 222

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ LL +M+        V +  +I+ LC    +  A  L   M  KG  PN VTYN+LI 
Sbjct: 223 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 282

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
            LC  G    A  LL  M+  K  PN VT+  +I+  VK G+ V+  ++   M +R    
Sbjct: 283 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 342

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS+LI+G     + ++A  +++ M+ K C PN V Y+ LI G C+  + +E  E+ 
Sbjct: 343 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 402

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM   G   N  TY++L++G F++G    A +I+K M  +    + + YS+L+ GLC+ 
Sbjct: 403 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 462

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           GKL +A +V+  +     +PD+  Y+ MI G+C AG VE+   LF  +     K  P+V 
Sbjct: 463 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK--PNVI 520

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            Y  +++  C++     +  L   M + G  P+  T N  + A
Sbjct: 521 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 563



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 232/477 (48%), Gaps = 11/477 (2%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANS---GDFKSLEMVLYRMRREKRVV 116
           +S+ P +  +     KLG Y+    T  SL+  Y +     +  +L   ++ M  +   V
Sbjct: 112 RSQLPLALAVLGKMMKLG-YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 170

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
              + I     + KA    EA+ L   MV    C+  + ++ +V+N + + G    AL  
Sbjct: 171 TFNTLIHGLFLHNKA---SEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSL 226

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
              +   K   I  + + +  +I  +C    V++A+ LF EM  +   P++ TY +L+  
Sbjct: 227 LKKMEKGK---IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 283

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC   R  +A  LL +M      P  VTF+ LI+   K G+L  A KL D M  +   P+
Sbjct: 284 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 343

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             TY++LI+G C+   LD+A  + + M++  C PN VTY T+I G  K  R  +G  +  
Sbjct: 344 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 403

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +R    N   Y+TLI GLF+ G  + A K++K+M+  G  P+ + YS L+DGLC+ G
Sbjct: 404 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 463

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K ++A  +   +  +    + +TY+ +++G  ++GK     +++  ++      N + Y+
Sbjct: 464 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 523

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +I G C  G   EA  ++ +M   G  P+   Y+++I      G    + +L  EM
Sbjct: 524 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 580



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 213/416 (51%), Gaps = 8/416 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +++      GD      +L +M + K       +  I  A      V +A+ LF  M
Sbjct: 206 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 265

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D    +  V ++NS++  +   G +  A    + ++  K   I PN +TF+ +I    +
Sbjct: 266 -DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVK 321

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A +L+ EM  R+ +PDI+TY +L++G C  +RLDEA  + + M    CFP  VT
Sbjct: 322 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 381

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI G CK   +    +L   M  +G + N VTYNTLI GL   G+ D A  +  +MV
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    P+ +TY  +++GL K G+      V   +++ K   + Y Y+ +I G+ K GK E
Sbjct: 442 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 501

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           D   L+  +  KG KPN ++Y+ +I G CR G  +EA+ +  EM  +G   N+ TY++L+
Sbjct: 502 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +     G    + E+ K+M     V +    S++I+ L  DG+L ++   + +MLS
Sbjct: 562 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS---YLEMLS 613



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 190/416 (45%), Gaps = 62/416 (14%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +LD+AV L  EM      P+ V FN L++ + K  +      L + M       +  +YN
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI+  C +  L  A+++L +M+     P+ VT  +++NG                    
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG-------------------- 143

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
                 Y +   IS         +A+ L  QM     +PNTV ++ LI GL    K  EA
Sbjct: 144 ------YCHGKRIS---------EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 188

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             ++  M+  GC  + FTY +++ G  + G    A+ + K M K     + V Y+ +I  
Sbjct: 189 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 248

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC    + +A  ++T+M ++G +P+VV Y+S+I  LCN G   +A +L ++M  +E K  
Sbjct: 249 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERKIN 306

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDG 599
           P+V T++ L++A  K+  +  +  L + M+ R  DPD+ T +  +    + ++L+  +  
Sbjct: 307 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK-- 364

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                                 + E+M+ K   P   T+  +++  C+ KR++  +
Sbjct: 365 ---------------------HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 399


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  265 bits (677), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 149/474 (31%), Positives = 258/474 (54%), Gaps = 21/474 (4%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ--------EGLYHR 172
           F  + K+  + +L+ +A+ + + +   +     V S+N++L+ +I+        EG++  
Sbjct: 135 FDLVVKSCARVNLINKALSIVN-LAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKE 193

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
            +E            + PN  T+N++I+  C  G ++  +  F EM    C P++ TY T
Sbjct: 194 MVE----------SGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNT 243

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           ++D  CK  ++ EA  LL  M + G  P  +++NV+INGLC+ G++   +++++ M  + 
Sbjct: 244 IIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRR 303

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +P+ VT+NTLI+G C  GN  +A+ L   MV +   PN VTY T+IN + K G      
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAM 363

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
             L  M +R  H N   Y+TLI G  ++G  + A ++ K+M+E G  P  + Y+ALI+G 
Sbjct: 364 EFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGH 423

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C +G+ ++A  +L EMI  G   +  +YS+++ GF  + +  KA ++  +M       + 
Sbjct: 424 CILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDV 483

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             YS LI GLC+  +L E   ++ +MLS G  PD V Y+S+I+  C  G +++AL+L +E
Sbjct: 484 ATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDE 543

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           M  ++    PD+ TYN+L+N   KQS    +  LL  ++     P+ +T N  +
Sbjct: 544 M--IQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLI 595



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 145/447 (32%), Positives = 236/447 (52%), Gaps = 8/447 (1%)

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLG 206
           + CK +   F+ V+    +  L ++AL     IVN AK    +P  L++N ++  V R  
Sbjct: 126 YQCKSSSAVFDLVVKSCARVNLINKALS----IVNLAKSYGFMPGVLSYNAILDAVIRTK 181

Query: 207 L-VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
             V  A  +F+EM      P++YTY  L+ G C    L+  +    EM+ +GC P  VT+
Sbjct: 182 QSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTY 241

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N +I+  CK  ++G A KL+  M LKG  PN ++YN +I+GLC +G + +   +L+ M  
Sbjct: 242 NTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSK 301

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
            + +P+ VT+ T+ING   +G       +   M +     N   Y+TLI+ + K G    
Sbjct: 302 RRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNR 361

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           AM+   QM ++G  PN   Y+ LIDG  + G   +A +I+ EM+ NG      TY++L+ 
Sbjct: 362 AMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALIN 421

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G    G+   A  + ++M +   + + V YS +I G C + +L +A  +  +M+++G  P
Sbjct: 422 GHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISP 481

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           DV  YSS+I GLC    + E   LF EML L     PD  TY  L+NA C + ++  ++ 
Sbjct: 482 DVATYSSLIQGLCKQRRLGEVCDLFQEMLSL--GLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEK 592
           L + M+ +G  PD+VT N+ +    ++
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQ 566



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/407 (31%), Positives = 208/407 (51%), Gaps = 17/407 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +++N+VI  +CR G +    ++  EM  R   PD  T+ TL++G C      +A++L
Sbjct: 271 PNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVL 330

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM  +G  P  VT+  LIN +CK G L RA + +D M  +G  PN  TY TLI G   
Sbjct: 331 HAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQ 390

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G L +A  ++  MV +   P  +TY  +ING   LGR  D + +L  M ER F  +   
Sbjct: 391 QGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVS 450

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YST+ISG  +  + E A +L  +M+ KG  P+   YS+LI GLC+  +  E  ++  EM+
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   +  TY+SL+  +   G   KA+ +  +M +     + V Y+VLI+G  +  + +
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMI---------------HGLCNAGSVEEALKLFNEML 534
           EA+ +  ++L     P+ + Y+++I                G C  G + EA ++   ML
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESML 630

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
               K   +V  YN++++   K  NI  + +L   M+  G  P  VT
Sbjct: 631 QKGYKLNEEV--YNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVT 675



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 224/454 (49%), Gaps = 27/454 (5%)

Query: 144 MVDEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +++E   +R V    +FN+++N     G +H+AL  +  +V      + PN +T+  +I 
Sbjct: 295 ILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKN---GLSPNVVTYTTLIN 351

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
           ++C+ G ++ A++   +M  R   P+  TY TL+DG  ++  L +A  ++ EM  +G  P
Sbjct: 352 SMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTP 411

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           T +T+N LING C  G +  A+ L+  M  +G +P+ V+Y+T+I G C    L+KA  L 
Sbjct: 412 TIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLK 471

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             MVA    P+  TY ++I GL K  R  +   +   M       +E  Y++LI+    E
Sbjct: 472 VEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIE 531

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G  + A++L  +M++KG  P+ V Y+ LI+G  +  +  EA+ +L +++      N  TY
Sbjct: 532 GDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITY 591

Query: 441 SSL---------------MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
           ++L               MKGF   G  ++A  + + M +     NE  Y+V+IHG  + 
Sbjct: 592 NTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKV 651

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--QPD 543
           G + +A  ++ +ML  G  P  V   ++   L + G   E     N++L    KS    +
Sbjct: 652 GNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE----LNQLLDYTLKSCRITE 707

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
                +L+    K+ N+    ++L  M   G  P
Sbjct: 708 AALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 120/474 (25%), Positives = 212/474 (44%), Gaps = 62/474 (13%)

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
           HI+    +     +L   +V+ TV   G  ++  Q  +      C+     +  ++    
Sbjct: 87  HILTRYKLYKTAQSLAEEVVVNTVDETG--EDLFQCLKN-SYYQCKSSSAVFDLVVKSCA 143

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK-LVDNMFLKGCLPNE 297
           + N +++A+ +++  +  G  P  +++N +++ + +  +  + A+ +   M   G  PN 
Sbjct: 144 RVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNV 203

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
            TYN LI G C  GNL+  +     M  + C+PN VTY TII+   KL            
Sbjct: 204 YTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLR----------- 252

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
                                   K  +A KL + M  KG  PN + Y+ +I+GLCR G+
Sbjct: 253 ------------------------KIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             E  EIL EM       +  T+++L+ G+   G  H+A+ +  +M KN    N V Y+ 
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI+ +C+ G L  A     QM  RG  P+   Y+++I G    G +++A ++  EM+  E
Sbjct: 349 LINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV--E 406

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               P + TYN L+N  C    +  +  LL  M++RG  PD+V+ +  ++          
Sbjct: 407 NGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF-------- 458

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                         + Q     F++   M+ K +SP  +T+  ++Q LC+ +R+
Sbjct: 459 -------------CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 209/444 (47%), Gaps = 25/444 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI  Y N G+F    ++   M +        ++  +  +  KA  +  A+     M
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D        +++ ++++   Q+G   +A +    +V        P  +T+N +I   C 
Sbjct: 370 RDR-GLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVEN---GFTPTIITYNALINGHCI 425

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           LG +++A  L +EM  R   PD+ +Y T++ G C+   L++A  L  EM   G  P   T
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LI GLCK   LG    L   M   G  P+EVTY +LI+  C++G+LDKA+ L D M+
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS--------- 375
                P+ VTY  +ING  K  R  +  R+L+ +   +   NE  Y+TLI          
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKS 605

Query: 376 ------GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
                 G   +G   +A ++ + M++KG K N  VY+ +I G  +VG  ++A  +  EM+
Sbjct: 606 ALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEML 665

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL-CEDGKL 488
           ++G A ++ T  +L K  +  GK  +  ++  D    +C   E   + ++ G+  ++G +
Sbjct: 666 HSGFAPHSVTIMALAKSLYHEGKEVELNQLL-DYTLKSCRITEAALAKVLIGINSKEGNM 724

Query: 489 REARMVWTQMLSRGCKPDVVAYSS 512
                V   M   G  P    YSS
Sbjct: 725 DAVFNVLKDMALSGLLP----YSS 744



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 24/259 (9%)

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           CK ++ V+  ++    RV   ++A  I+    + G      +Y++++     + +  K  
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 458 E-IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           E I+K+M ++    N   Y++LI G C  G L      + +M   GC P+VV Y+++I  
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDA 247

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C    + EA KL   M        P++ +YN+++N LC++  +  + ++L  M  R   
Sbjct: 248 YCKLRKIGEAFKLLRLMAL--KGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV 305

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           PD VT N  +           +  +F   L +                 M++  LSP   
Sbjct: 306 PDRVTFNTLINGY-------CNVGNFHQALVLH--------------AEMVKNGLSPNVV 344

Query: 637 TWERVVQELCRPKRIQAAI 655
           T+  ++  +C+   +  A+
Sbjct: 345 TYTTLINSMCKAGNLNRAM 363


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 148/480 (30%), Positives = 251/480 (52%), Gaps = 22/480 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +   +N ++   CR G +D A +L   MPV    PD YTY  ++ GLC   R+ +A+ LL
Sbjct: 108 DVFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPIIRGLCDRGRVGDALALL 164

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+M   GC P+ VT+ VL+  +CK+   G A  ++D M  KGC PN VTYN +I+G+C +
Sbjct: 165 DDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 224

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D A  +L+R+ +    P+ V+Y T++ GL    R  D   +   M ++K   NE  +
Sbjct: 225 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 284

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             L+    + G  E A+++ +QM + GC PNT + + +I+ +C+ G+ D+A + L  M  
Sbjct: 285 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 344

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC  +  +Y+++++G   +G+   A E+  +M + NC  NEV ++  I  LC+ G + +
Sbjct: 345 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 404

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +   M   GC   +V Y++++HG C  G V+ AL+LFN + C     +P+  TY  L
Sbjct: 405 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPC-----EPNTITYTTL 459

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT------ALKEKLEAPQDGTDF-- 602
           L  LC    +  + +LL  M+ + C  + VT N+ ++       ++E +E      +   
Sbjct: 460 LTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGC 519

Query: 603 ------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                  N L   + K   +    +++  ++ K +S  T T+  VV  L R  R + AI 
Sbjct: 520 TPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQ 579



 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 257/487 (52%), Gaps = 23/487 (4%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M + P+  T+  +I+ +C  G V +A+ L  +M  R C+P + TY  L++ +CK +   E
Sbjct: 135 MPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGE 194

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ +LDEM+  GC P  VT+NV+ING+C+ G +  A ++++ +   G  P+ V+Y T++ 
Sbjct: 195 AMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLK 254

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC     D    L   MV  KC+PNEVT+  ++    + G      +VL  M +     
Sbjct: 255 GLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTP 314

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N  + + +I+ + K+G+ +DA      M   GC P+T+ Y+ ++ GLCR G+ + A+E+L
Sbjct: 315 NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM+   C  N  T+++ +    + G   +A+++ + M +  C    V Y+ L+HG C  
Sbjct: 375 PEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQ 434

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP-DV 544
           G++  A  ++  +    C+P+ + Y++++ GLC+A  ++ A +L   M+    K  P + 
Sbjct: 435 GRVDSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMI---QKDCPLNA 488

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            T+N+L++  C++  +  +++L+N MM+ GC P+L+T N  L  + +   + ++  + L+
Sbjct: 489 VTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS-EEALELLH 547

Query: 605 ELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
            L  +               L +  RT    +++  +    + P+   + +++  LC+  
Sbjct: 548 GLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRC 607

Query: 650 RIQAAIN 656
               AI+
Sbjct: 608 ETDQAID 614



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 241/493 (48%), Gaps = 42/493 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V +A+ L   M+    C+ +V ++  +L  + +   +  A+   + +   +     PN +
Sbjct: 157 VGDALALLDDMLQR-GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM---RAKGCTPNIV 212

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N++I  +CR G VD+A ++   +     +PDI +Y T++ GLC   R D+  +L  EM
Sbjct: 213 TYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEM 272

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
               C P  VTF++L+   C+ G + RA +++  M   GC PN    N +I+ +C +G +
Sbjct: 273 VDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRV 332

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A   L+ M    C P+ ++Y T++ GL + GR      +L  M  +    NE  ++T 
Sbjct: 333 DDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTF 392

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN-G 432
           I  L ++G  E A+KL + M E GC    V Y+AL+ G C  G+ D A     E+ NN  
Sbjct: 393 ICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA----LELFNNLP 448

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C  N  TY++L+ G   + +   A E+   M + +C  N V ++VL+   C+ G + EA 
Sbjct: 449 CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAM 508

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN------------------EML 534
            +  QM+  GC P+++ +++++ G+    + EEAL+L +                  ++L
Sbjct: 509 ELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVL 568

Query: 535 CLEPKSQ---------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
             E +++               P V  YN +L ALCK+     +ID    M+  GC P+ 
Sbjct: 569 SREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNE 628

Query: 580 VTCNIFLTALKEK 592
            T  I +  L  +
Sbjct: 629 STYIILIEGLAHE 641



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 227/437 (51%), Gaps = 8/437 (1%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           + EI N     G +Q    ++ ++++    +  +  ++++   M  +K V  E +F  + 
Sbjct: 230 AKEILNRLSSYG-FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 288

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           + + +  +VE AI++   M  +  C       N V+N I ++G    A +F N   N   
Sbjct: 289 RFFCRGGMVERAIQVLQQM-SQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN---NMGM 344

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
               P+T+++  V++ +CR G  ++A +L  EM  +NC P+  T+ T +  LC++  +++
Sbjct: 345 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 404

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ L++ M   GC    VT+N L++G C  G +  A +L +N+    C PN +TY TL+ 
Sbjct: 405 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLT 461

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC    LD A  LL  M+   C  N VT+  +++   + G   +   ++  M E     
Sbjct: 462 GLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 521

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   ++TL+ G+ K+  +E+A++L   ++ KG   +T+ YS+++D L R  + +EA ++L
Sbjct: 522 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 581

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             + + G       Y+ ++    +  +  +A++ +  M  N C+ NE  Y +LI GL  +
Sbjct: 582 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 641

Query: 486 GKLREARMVWTQMLSRG 502
           G L+EAR V +++ ++G
Sbjct: 642 GLLKEARYVLSELYAKG 658



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 198/438 (45%), Gaps = 34/438 (7%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L   + L EA  L++     G  P       LI  LC+ G    AA+++      G   +
Sbjct: 49  LIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVD 108

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              YNTL+ G C  G LD A  L+  M      P+  TY  II GL   GR  D   +L 
Sbjct: 109 VFAYNTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTPIIRGLCDRGRVGDALALLD 165

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +R    +   Y+ L+  + K     +AM +  +M  KGC PN V Y+ +I+G+CR G
Sbjct: 166 DMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 225

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + D+A+EIL  + + G   +  +Y++++KG   + +      ++ +M    CV NEV + 
Sbjct: 226 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 285

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +L+   C  G +  A  V  QM   GC P+    + +I+ +C  G V++A    N M   
Sbjct: 286 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                PD  +Y  +L  LC+     H+ +LL  M+ + C P+ VT N F+  L +K    
Sbjct: 346 --GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK---- 399

Query: 597 QDGTDFLNELAIRLFKRQRTSG-------------GFKI---VEVMLQKF----LSPQTS 636
                 L E AI+L +     G             GF +   V+  L+ F      P T 
Sbjct: 400 -----GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTI 454

Query: 637 TWERVVQELCRPKRIQAA 654
           T+  ++  LC  +R+ AA
Sbjct: 455 TYTTLLTGLCHAERLDAA 472



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/286 (24%), Positives = 133/286 (46%), Gaps = 19/286 (6%)

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +L +    +G  P+  + + LI  LCR G+  +A  +L     +G   + F Y++L+
Sbjct: 57  EAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLV 116

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+   G+   A  +   M      Y    Y+ +I GLC+ G++ +A  +   ML RGC+
Sbjct: 117 AGYCRYGRLDAARRLIASMPVPPDAYT---YTPIIRGLCDRGRVGDALALLDDMLQRGCQ 173

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P VV Y+ ++  +C +    EA+ + +EM        P++ TYN+++N +C++  +  + 
Sbjct: 174 PSVVTYTVLLEAVCKSSGFGEAMNVLDEM--RAKGCTPNIVTYNVIINGMCREGRVDDAK 231

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQDGTDFLNELAIRLFKRQR 615
           ++LN +   G  PD+V+    L  L         K       D     NE+   +  R  
Sbjct: 232 EILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFF 291

Query: 616 TSGG-----FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             GG      ++++ M Q   +P T+    V+  +C+  R+  A +
Sbjct: 292 CRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYD 337



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 109/227 (48%), Gaps = 8/227 (3%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E+FN+ P     +    T+ +L+    ++    +   +L  M ++   +   +F  +   
Sbjct: 442 ELFNNLP----CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSF 497

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           + +   VEEA+ L + M+ E  C   + +FN++L+ I ++     ALE  + +V +K ++
Sbjct: 498 FCQKGFVEEAMELVNQMM-EHGCTPNLITFNTLLDGITKDCNSEEALELLHGLV-SKGVS 555

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           +  +T+T++ V+  + R    + AIQ+   +      P +  Y  ++  LCK    D+A+
Sbjct: 556 L--DTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 613

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
                M  +GC P   T+ +LI GL   G L  A  ++  ++ KG L
Sbjct: 614 DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 660


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  265 bits (677), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 149/495 (30%), Positives = 250/495 (50%), Gaps = 6/495 (1%)

Query: 94  ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRT 153
           A+ G    LE +L  M  E R +   + + +  AYG+ +   +A  LF+   + F C  T
Sbjct: 6   ASWGILDPLETLLKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQ-AESFACSPT 64

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +F  ++++++  G + RA   Y  +V         +   +N++I+   R G +D+A++
Sbjct: 65  VHAFTKLIDILVNSGEFERAELVYKKLV---QKGCQLDRFAYNVLIRYFGRSGQLDSAME 121

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +FREM ++  EPD YTY  L++ L K  R+ EA    D M   G  P   T+N+L++   
Sbjct: 122 MFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFR 181

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G+L  A  L   M  +G  P+ VTYN L+  LC  G +  A  L  +M    C P+  
Sbjct: 182 KVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY 241

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T++NGL K GR  +  +V   M +R   V+   Y++L++ L K G  +   KL K+M
Sbjct: 242 TYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEM 301

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             KG  P+   ++ ++D L +  KPD A E+   M+ +GC  +  +Y+ L+  +   G  
Sbjct: 302 SRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDA 361

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A ++ ++M +   +     Y+ LIH L  DG++ EA  V  +M + GC+PDVV Y+ +
Sbjct: 362 AQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRL 421

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           +  L   G  + A +LF +M   +   +PD  +Y + ++ L     +  ++ L   M   
Sbjct: 422 MDMLGKRGENQRAARLFQQM--KDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAV 479

Query: 574 GCDPDLVTCNIFLTA 588
           GC  D     I + A
Sbjct: 480 GCPVDKAMYRILIRA 494



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 222/455 (48%), Gaps = 18/455 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
            F  LI    NSG+F+  E+V Y+   +K   L++ ++  + + +G++  ++ A+ +F  
Sbjct: 67  AFTKLIDILVNSGEFERAELV-YKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFRE 125

Query: 144 M------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           M       DE+       ++  ++N + + G    A  F++ ++      + PN  T+NL
Sbjct: 126 MKIKGSEPDEY-------TYGFLVNALGKAGRVQEARSFFDAML---ERGLTPNIPTYNL 175

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           ++    ++G +D A+ LF EM  R  +P + TY  L+D LC   R+  A  L  +M  DG
Sbjct: 176 LMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDG 235

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C P   T++ L+NGL K+G +  A K+   M  +G   + V YN+L+  L   GN+D+  
Sbjct: 236 CSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVW 295

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            L+  M      P+  ++ TI++ L K  +      V   M E     +   Y+ LI   
Sbjct: 296 KLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSY 355

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            + G A  A ++ ++M+E G  P T  Y++LI  L   G+ DEA  +L EM   GC  + 
Sbjct: 356 ARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDV 415

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY+ LM    + G+  +A  +++ M       + + Y+V I GL  D +L EA +++  
Sbjct: 416 VTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKD 475

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           M + GC  D   Y  +I     AG  E   +L +E
Sbjct: 476 MKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 209/429 (48%), Gaps = 13/429 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PNTL    +I    R     +A  LF +     C P ++ +  L+D L      + A L+
Sbjct: 30  PNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELV 87

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             ++   GC      +NVLI    ++G+L  A ++   M +KG  P+E TY  L++ L  
Sbjct: 88  YKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGK 147

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G + +A S  D M+     PN  TY  +++   K+G+      +   M+ R F  +   
Sbjct: 148 AGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVT 207

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ L+  L   G+   A KL+ +M   GC P++  YS L++GL + G+ +EA ++  EM+
Sbjct: 208 YNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMV 267

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G A +   Y+SL+    ++G   +  ++ K+M++     +   ++ ++  L +  K  
Sbjct: 268 DRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPD 327

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            AR V+ +M+  GCKPD+++Y+ +I      G   +A ++  EM+  E    P+  TYN 
Sbjct: 328 AAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV--EAGFIPETKTYNS 385

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L++ L     +  +  +L  M   GC PD+VT N  +  L ++ E         N+ A R
Sbjct: 386 LIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGE---------NQRAAR 436

Query: 610 LFKRQRTSG 618
           LF++ +  G
Sbjct: 437 LFQQMKDKG 445



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 197/407 (48%), Gaps = 4/407 (0%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           QL    +  LI+++  SG   S   +   M+ +     E ++ F+  A GKA  V+EA  
Sbjct: 97  QLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARS 156

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            F  M+ E      + ++N +++   + G    AL  +  +   K     P+ +T+N+++
Sbjct: 157 FFDAML-ERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEM---KRRGFQPSVVTYNILL 212

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C  G V  A +LF +M    C PD YTY TL++GL K  R++EA  +  EM   G  
Sbjct: 213 DALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVA 272

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
              V +N L+  L K G + R  KL+  M  KG  P+  ++NT++  L      D A  +
Sbjct: 273 VDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREV 332

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
             RMV S C P+ ++Y  +I+   + G A    ++L  M E  F      Y++LI  L  
Sbjct: 333 FARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLAT 392

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           +G+ ++A  + ++M   GC+P+ V Y+ L+D L + G+   A  +  +M + G   +  +
Sbjct: 393 DGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLS 452

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           Y+  + G     +  +A+ ++KDM    C  ++  Y +LI      G
Sbjct: 453 YAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAG 499



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 198/452 (43%), Gaps = 62/452 (13%)

Query: 206 GLVDNAIQLFREMPV--RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           G++D    L +EM    R   P+  T   L+    + N+  +A  L ++ +   C PT  
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVH 66

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            F  LI+ L  +GE  RA  +   +  KGC  +   YN LI      G LD A+ +   M
Sbjct: 67  AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                 P+E                                   Y Y  L++ L K G+ 
Sbjct: 127 KIKGSEPDE-----------------------------------YTYGFLVNALGKAGRV 151

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A   +  M+E+G  PN   Y+ L+D   +VG+ D A  +  EM   G   +  TY+ L
Sbjct: 152 QEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNIL 211

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +     +G+   A +++  M  + C  +   YS L++GL + G++ EA  V+ +M+ RG 
Sbjct: 212 LDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGV 271

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             D+V Y+S++  L  AG+++   KL  EM        PD F++N +++AL K +    +
Sbjct: 272 AVDLVNYNSLLATLAKAGNMDRVWKLMKEMS--RKGFHPDAFSFNTIMDALGKANKPDAA 329

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
            ++   M++ GC PDL++ NI + +     +A Q               RQ       ++
Sbjct: 330 REVFARMVESGCKPDLISYNILIDSYARFGDAAQ--------------ARQ-------ML 368

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           E M++    P+T T+  ++  L    ++  A 
Sbjct: 369 EEMVEAGFIPETKTYNSLIHWLATDGQVDEAF 400


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 165/552 (29%), Positives = 280/552 (50%), Gaps = 35/552 (6%)

Query: 110 RREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL 169
           R E+ V  E ++  +     KA  +++A  L   M D       V   N V+  + + G 
Sbjct: 22  REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR-GIPPGVAVHNGVIKGLCKAGR 80

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-CEPDIY 228
           +  AL ++  +   K     P+ +TFN+++  + + G V+ A Q+F  M   + C P++ 
Sbjct: 81  FGDALGYFKTVAGTK---CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVV 137

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY T+++GLCK+ +LD A+ LLD M   GC P  +T++VL+ GLCK G   +   L+  M
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             +G  P+ + YNTL++GLC    LD+A+ L+  M+ S C P  VTY +++    +  + 
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
               R++  M ER    +   Y+T+I+GL ++ + +DA  L KQM+   C P+ + YS +
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317

Query: 409 IDGLCRVGKPD------EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           IDGLC+  + D       A EIL  M   GC  NA TY+ +++G   + K  +A+ + + 
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M  +  V +   +S++I  LC+   L  A  ++  M  R CKP+ VAY+++I GL   G 
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           V++A+++F  M+      +P V TYN +L+ LC    I  ++ ++  M+ + C PD  + 
Sbjct: 438 VDKAVRVFELMV---ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASY 494

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
              +  L                   R+   +     F+ VE    K  + +   +  +V
Sbjct: 495 GALIRGL------------------CRVSCVEEAYELFQAVEA---KGFAMEVGVYNVLV 533

Query: 643 QELCRPKRIQAA 654
            ELC+ KR+  A
Sbjct: 534 NELCKKKRLSDA 545



 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/463 (32%), Positives = 256/463 (55%), Gaps = 16/463 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +  A  K+  VEEA ++F +M     C   V ++ +V+N + ++G   RA+E  + 
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +         PN +T++++++ +C+ G  D    L +EM  R  +PD+  Y TL++GLCK
Sbjct: 162 M---NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCK 218

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             RLDEA+ L+  M   GC+PT VT+N L+   C++ ++ RA +L+  M  +GC P+ + 
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG-------A 352
           YNT+I GLC    LD A +LL +MVA++C+P+ +TY TII+GL K  R VD         
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR-VDADWKLEAAC 337

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  M++     N   Y+ +I GL +  K++ A+ L ++M++    P+   +S +I  L
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+    D A +I   M    C  N   Y++L+ G  + G+  KAV +++ M ++      
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-RPGV 456

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y+ ++ GLC  G++ EA  +   M+ + C PD  +Y ++I GLC    VEEA +LF  
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516

Query: 533 MLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
              +E K    +V  YN+L+N LCK+  +S +  + N +++ G
Sbjct: 517 ---VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 247/480 (51%), Gaps = 23/480 (4%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N  +  + R G    A+QLFRE     C P+ +TY +L+ GLCK  +LD+A  LLDEM+
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P     N +I GLCK G  G A      +    C P+ +T+N L+  L   G ++
Sbjct: 58  DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 315 KAVSLLDRM-VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           +A  + + M  +S+C+PN VTY T+INGL K G+      +L  M E     N   YS L
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL K G+ +    L ++M  +G +P+ ++Y+ L++GLC+  + DEA E++  MI +GC
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                TY+SLM+ F  S +  +A  + + M++  C  + + Y+ +I GLC D +L +A+ 
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ----PDVFTYNI 549
           +  QM++  C PDV+ YS++I GLC    V+   KL      LE   Q    P+  TY +
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNE-- 605
           ++  LC+      ++ LL  M+D    PDL + ++ + +L     L+A       ++E  
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417

Query: 606 ----------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                     L   L K        ++ E+M++ F  P  +T+  V+  LC   RI+ A+
Sbjct: 418 CKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-RPGVATYNSVLDGLCGVGRIEEAV 476



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 116/216 (53%), Gaps = 1/216 (0%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K     PN  T+ +VI+ +CR      A+ L R M      PD+ ++  ++  LCK + L
Sbjct: 344 KQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDL 403

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A  +   M    C P PV +  LI+GL K GE+ +A ++ + + ++   P   TYN++
Sbjct: 404 DAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSV 462

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           + GLC  G +++AV +++ M+  +C P+  +YG +I GL ++    +   +  ++E + F
Sbjct: 463 LDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGF 522

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            +   +Y+ L++ L K+ +  DA  +  +++E G K
Sbjct: 523 AMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 5/163 (3%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           S+F  +I     S D  +   +   M   +      ++  +     K   V++A+R+F  
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV+ F  +  V ++NSVL+ +   G    A+     ++   H    P+  ++  +I+ +C
Sbjct: 448 MVESF--RPGVATYNSVLDGLCGVGRIEEAVRMVEGMI---HKECFPDGASYGALIRGLC 502

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           R+  V+ A +LF+ +  +    ++  Y  L++ LCK+ RL +A
Sbjct: 503 RVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  265 bits (676), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 165/552 (29%), Positives = 280/552 (50%), Gaps = 35/552 (6%)

Query: 110 RREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL 169
           R E+ V  E ++  +     KA  +++A  L   M D       V   N V+  + + G 
Sbjct: 22  REERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDR-GIPPGVAVHNGVIRGLCKAGR 80

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-CEPDIY 228
           +  AL ++  +   K     P+ +TFN+++  + + G V+ A Q+F  M   + C P++ 
Sbjct: 81  FGDALGYFKTVAGTK---CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVV 137

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY T+++GLCK+ +LD A+ LLD M   GC P  +T++VL+ GLCK G   +   L+  M
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             +G  P+ + YNTL++GLC    LD+A+ L+  M+ S C P  VTY +++    +  + 
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
               R++  M ER    +   Y+T+I+GL ++ + +DA  L KQM+   C P+ + YS +
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317

Query: 409 IDGLCRVGKPD------EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           IDGLC+  + D       A EIL  M   GC  NA TY+ +++G   + K  +A+ + + 
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M  +  V +   +S++I  LC+   L  A  ++  M  R CKP+ VAY+++I GL   G 
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           V++A+++F  M+      +P V TYN +L+ LC    I  ++ ++  M+ + C PD  + 
Sbjct: 438 VDKAVRVFELMV---ESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASY 494

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
              +  L                   R+   +     F+ VE    K  + +   +  +V
Sbjct: 495 GALIRGL------------------CRVSCVEEAYELFQAVEA---KGFAMEVGVYNVLV 533

Query: 643 QELCRPKRIQAA 654
            ELC+ KR+  A
Sbjct: 534 NELCKKKRLSDA 545



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 152/463 (32%), Positives = 256/463 (55%), Gaps = 16/463 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +  A  K+  VEEA ++F +M     C   V ++ +V+N + ++G   RA+E  + 
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +         PN +T++++++ +C+ G  D    L +EM  R  +PD+  Y TL++GLCK
Sbjct: 162 M---NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCK 218

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             RLDEA+ L+  M   GC+PT VT+N L+   C++ ++ RA +L+  M  +GC P+ + 
Sbjct: 219 SRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN 278

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG-------A 352
           YNT+I GLC    LD A +LL +MVA++C+P+ +TY TII+GL K  R VD         
Sbjct: 279 YNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR-VDADWKLEAAC 337

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  M++     N   Y+ +I GL +  K++ A+ L ++M++    P+   +S +I  L
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+    D A +I   M    C  N   Y++L+ G  + G+  KAV +++ M ++      
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-RPGV 456

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y+ ++ GLC  G++ EA  +   M+ + C PD  +Y ++I GLC    VEEA +LF  
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516

Query: 533 MLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
              +E K    +V  YN+L+N LCK+  +S +  + N +++ G
Sbjct: 517 ---VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/480 (32%), Positives = 247/480 (51%), Gaps = 23/480 (4%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N  +  + R G    A+QLFRE     C P+ +TY +L+ GLCK  +LD+A  LLDEM+
Sbjct: 1   MNCALNLLVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P     N +I GLCK G  G A      +    C P+ +T+N L+  L   G ++
Sbjct: 58  DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117

Query: 315 KAVSLLDRM-VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           +A  + + M  +S+C+PN VTY T+INGL K G+      +L  M E     N   YS L
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL K G+ +    L ++M  +G +P+ ++Y+ L++GLC+  + DEA E++  MI +GC
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                TY+SLM+ F  S +  +A  + + M++  C  + + Y+ +I GLC D +L +A+ 
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ----PDVFTYNI 549
           +  QM++  C PDV+ YS++I GLC    V+   KL      LE   Q    P+  TY +
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAV 357

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNE-- 605
           ++  LC+      ++ LL  M+D    PDL + ++ + +L     L+A       ++E  
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417

Query: 606 ----------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                     L   L K        ++ E+M++ F  P  +T+  V+  LC   RI+ A+
Sbjct: 418 CKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-RPGVATYNSVLDGLCGVGRIEEAV 476



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 62/216 (28%), Positives = 116/216 (53%), Gaps = 1/216 (0%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K     PN  T+ +VI+ +CR      A+ L R M      PD+ ++  ++  LCK + L
Sbjct: 344 KQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDL 403

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A  +   M    C P PV +  LI+GL K GE+ +A ++ + + ++   P   TYN++
Sbjct: 404 DAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVATYNSV 462

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           + GLC  G +++AV +++ M+  +C P+  +YG +I GL ++    +   +  ++E + F
Sbjct: 463 LDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGF 522

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            +   +Y+ L++ L K+ +  DA  +  +++E G K
Sbjct: 523 AMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 5/163 (3%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           S+F  +I     S D  +   +   M   +      ++  +     K   V++A+R+F  
Sbjct: 388 SSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFEL 447

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV+ F  +  V ++NSVL+ +   G    A+     ++   H    P+  ++  +I+ +C
Sbjct: 448 MVESF--RPGVATYNSVLDGLCGVGRIEEAVRMVEGMI---HKECFPDGASYGALIRGLC 502

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           R+  V+ A +LF+ +  +    ++  Y  L++ LCK+ RL +A
Sbjct: 503 RVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  265 bits (676), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 253/480 (52%), Gaps = 22/480 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +   +N ++   CR G +D A +L   MPV    PD YTY  L+ GLC   R+ +A+ LL
Sbjct: 104 DVFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPLIRGLCDRGRVGDALSLL 160

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+M    C P+ VT+ VL+  +CK+   G+A K++D M  KGC PN VTYN +I+G+C +
Sbjct: 161 DDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRE 220

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             +D A  +L+R+ +    P+ V+Y T++ GL    R  D   +   M E     NE  +
Sbjct: 221 DRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTF 280

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             L+    + G  E A+++  +M E GC  NT + + +I+ +C+ G+ D+A E L  M +
Sbjct: 281 DMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC+ +  +Y++++KG   +G+   A E+  +M + NC  NEV ++  I  LC+ G + +
Sbjct: 341 YGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQ 400

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A ++  QM   GC   +V Y+++++G C  G V+ AL+LFN + C     +P+  TY  L
Sbjct: 401 AILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPC-----EPNTITYTTL 455

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT------ALKEKLEAPQDGTDF-- 602
           L  LC    +  + +LL  MM   C  ++VT N+ ++       ++E +E  Q   +   
Sbjct: 456 LTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGC 515

Query: 603 ------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                  N L   + +   +    +++  ++ K +S  T T+  +V  L R  RI+ A+ 
Sbjct: 516 TPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQ 575



 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 249/473 (52%), Gaps = 10/473 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V +A+ L   M+    C+ +V ++  +L  + +   + +A++  + +   +     PN +
Sbjct: 153 VGDALSLLDDMLRR-ECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM---RAKGCTPNIV 208

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N++I  +CR   VD+A Q+   +     +PD  +Y T++ GLC   R ++  +L  EM
Sbjct: 209 TYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEM 268

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             + C P  VTF++L+   C+ G + RA +++D M   GC  N    N +I+ +C +G +
Sbjct: 269 VENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRV 328

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A   L+ M +  C P+ ++Y T++ GL + GR  D   +L  M  +    NE  ++T 
Sbjct: 329 DDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTF 388

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I  L ++G  + A+ L +QM E GC    V Y+AL++G C  G+ D A E+   +    C
Sbjct: 389 ICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PC 445

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  TY++L+ G   + +   A E+  +M +N+C  N V ++VL+   C+ G + EA  
Sbjct: 446 EPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIE 505

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  QM+  GC P+++ +++++ G+    + EEAL+L + ++        D  TY+ +++ 
Sbjct: 506 LVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLV--SKGISLDTITYSSIVDV 563

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           L ++  I  ++ + +++ D G  P  V  N  L+AL ++ E  +   DF   +
Sbjct: 564 LSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDR-AIDFFAHM 615



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/414 (30%), Positives = 215/414 (51%), Gaps = 7/414 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  + K    A   E+   LF  MV E +C     +F+ ++    + G+  RA+E  + 
Sbjct: 244 SYTTVLKGLCAAKRWEDVEVLFCEMV-ENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDR 302

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  ++H     NT   N+VI ++C+ G VD+A +    M    C PD  +Y T++ GLC+
Sbjct: 303 M--SEH-GCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCR 359

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R ++A  LL+EM    C P  VTFN  I  LC+ G + +A  L++ M   GC    VT
Sbjct: 360 AGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVT 419

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN L++G C++G +D A+ L + +    C PN +TY T++ GL    R    A +L  M 
Sbjct: 420 YNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMM 476

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +    +N   ++ L+S   ++G  E+A++L +QMME GC PN + ++ L+DG+      +
Sbjct: 477 QNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSE 536

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA E+L  +++ G + +  TYSS++       +  +AV+++  +         V Y+ ++
Sbjct: 537 EALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKIL 596

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             LC+  +   A   +  M+S  C P+   Y  +I GL   G ++EA  + +E+
Sbjct: 597 SALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSEL 650



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 228/435 (52%), Gaps = 8/435 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           +I N     G +Q    ++ ++++    +  ++ +E++   M     V  E +F  + + 
Sbjct: 228 QILNRLSSYG-FQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRF 286

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           + +  +VE AI +   M  E  C       N V+N I ++G    A EF N   N     
Sbjct: 287 FCRGGMVERAIEVLDRM-SEHGCTANTTLCNIVINSICKQGRVDDAFEFLN---NMGSYG 342

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             P+T+++  V+K +CR G  ++A +L  EM  +NC P+  T+ T +  LC++  +D+A+
Sbjct: 343 CSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAI 402

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           LL+++M   GC    VT+N L+NG C  G +  A +L +++    C PN +TY TL+ GL
Sbjct: 403 LLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGL 459

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C    LD A  LL  M+ + C  N VT+  +++   + G   +   ++  M E     N 
Sbjct: 460 CHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNL 519

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             ++TL+ G+ ++  +E+A++L   ++ KG   +T+ YS+++D L R  + +EA ++   
Sbjct: 520 ITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHA 579

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           + + G    A  Y+ ++    +  +  +A++ +  M  N+C+ NE  Y +LI GL  +G 
Sbjct: 580 VQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGL 639

Query: 488 LREARMVWTQMLSRG 502
           L+EAR V +++ SRG
Sbjct: 640 LKEARYVLSELCSRG 654



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 239/490 (48%), Gaps = 9/490 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L++    S  F     VL  MR +       ++  I     +   V++A ++ + +
Sbjct: 174 TYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRL 233

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                   TV S+ +VL  +     +      +  +V     N +PN +TF+++++  CR
Sbjct: 234 SSYGFQPDTV-SYTTVLKGLCAAKRWEDVEVLFCEMVEN---NCVPNEVTFDMLVRFFCR 289

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G+V+ AI++   M    C  +      +++ +CK+ R+D+A   L+ M   GC P  ++
Sbjct: 290 GGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTIS 349

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  ++ GLC+ G    A +L++ M  K C PNEVT+NT I  LC KG +D+A+ L+++M 
Sbjct: 350 YTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMP 409

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C    VTY  ++NG    GR VD A  L +        N   Y+TL++GL    + +
Sbjct: 410 EYGCSVGIVTYNALVNGFCVQGR-VDSALELFN--SLPCEPNTITYTTLLTGLCHAERLD 466

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A +L  +MM+  C  N V ++ L+   C+ G  +EA E++ +M+ +GC  N  T+++L+
Sbjct: 467 AAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLL 526

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  E     +A+E+   +       + + YS ++  L  + ++ EA  ++  +   G +
Sbjct: 527 DGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMR 586

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P  V Y+ ++  LC     + A+  F  M  +     P+  TY IL+  L ++  +  + 
Sbjct: 587 PKAVMYNKILSALCKRCETDRAIDFFAHM--VSNSCMPNESTYVILIEGLAREGLLKEAR 644

Query: 565 DLLNSMMDRG 574
            +L+ +  RG
Sbjct: 645 YVLSELCSRG 654



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 199/435 (45%), Gaps = 28/435 (6%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L   + L EA  L++     G  P       LI  LC+ G    AA+++      G   +
Sbjct: 45  LIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVD 104

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              YNTL+ G C  G LD A  L+  M      P+  TY  +I GL   GR  D   +L 
Sbjct: 105 VFAYNTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTPLIRGLCDRGRVGDALSLLD 161

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M  R+   +   Y+ L+  + K      AMK+  +M  KGC PN V Y+ +I+G+CR  
Sbjct: 162 DMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRED 221

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + D+A +IL  + + G   +  +Y++++KG   + +      ++ +M +NNCV NEV + 
Sbjct: 222 RVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFD 281

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +L+   C  G +  A  V  +M   GC  +    + +I+ +C  G V++A +  N M   
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSY 341

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK---- 592
                PD  +Y  +L  LC+      + +LLN M+ + C P+ VT N F+  L +K    
Sbjct: 342 --GCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLID 399

Query: 593 ------LEAPQDGTDFLNELAIRLFKRQRTSGGFKI---VEVMLQKFLS----PQTSTWE 639
                  + P+ G       ++ +        GF +   V+  L+ F S    P T T+ 
Sbjct: 400 QAILLIEQMPEYGC------SVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYT 453

Query: 640 RVVQELCRPKRIQAA 654
            ++  LC  +R+ AA
Sbjct: 454 TLLTGLCHAERLDAA 468



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 139/301 (46%), Gaps = 25/301 (8%)

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S+ +  L       +A +L ++   +G  P+  + + LI  LCR G+  +A  +L     
Sbjct: 39  SSRLRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEG 98

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +G   + F Y++L+ G+   G+   A  +   M      Y    Y+ LI GLC+ G++ +
Sbjct: 99  SGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYT---YTPLIRGLCDRGRVGD 155

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +   ML R C+P VV Y+ ++  +C +    +A+K+ +EM        P++ TYN++
Sbjct: 156 ALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM--RAKGCTPNIVTYNVI 213

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ-DGTDFL------ 603
           +N +C++  +  +  +LN +   G  PD V+   + T LK    A + +  + L      
Sbjct: 214 INGMCREDRVDDARQILNRLSSYGFQPDTVS---YTTVLKGLCAAKRWEDVEVLFCEMVE 270

Query: 604 -----NELAIRLFKRQRTSGG-----FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                NE+   +  R    GG      ++++ M +   +  T+    V+  +C+  R+  
Sbjct: 271 NNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDD 330

Query: 654 A 654
           A
Sbjct: 331 A 331



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/227 (23%), Positives = 103/227 (45%), Gaps = 8/227 (3%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E+FNS P     +    T+ +L+    ++    +   +L  M +    +   +F  +   
Sbjct: 438 ELFNSLP----CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSF 493

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           + +   VEEAI L   M+ E  C   + +FN++L+ I ++     ALE  + +V+     
Sbjct: 494 FCQKGFVEEAIELVQQMM-EHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSK---G 549

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I  +T+T++ ++  + R   ++ A+Q+F  +      P    Y  ++  LCK    D A+
Sbjct: 550 ISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAI 609

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
                M  + C P   T+ +LI GL + G L  A  ++  +  +G L
Sbjct: 610 DFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  264 bits (675), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/451 (31%), Positives = 243/451 (53%), Gaps = 7/451 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A+ +    +EA  LF   +    C     ++++++N   +   + +A    + +   
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGL-CSPDSITYSTLINGFCKARDFQQAYRLLDEM--- 59

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   I+P+   +N +IK +C  G VD+A+  +R+M  R+C P + TY  L+D LCK  R+
Sbjct: 60  EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ-RHCAPSVITYTILVDALCKSARI 118

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +A L+L++M   GC P  VT+N LING CK G +  A  L + M    C P+  TYN L
Sbjct: 119 SDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNIL 178

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C +        LL  MV   C PN +TY T+++ LVK G+ +D   +   M  R  
Sbjct: 179 IDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             + + ++ +I    K G+ + A +L++ M ++GC P+   Y+ +I G CR  + D+A +
Sbjct: 239 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 298

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L  M   GC  +  TY+S++ G  ++ +  +A E+++ +       + V  S LI GLC
Sbjct: 299 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 358

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           +  +L +A  +  +M   G  PDVVAY+ +IHG C A  ++++L  F+EM  L+    P 
Sbjct: 359 KSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM--LDKGCVPT 416

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           V TY+I+++ LCK + +     LL +M++RG
Sbjct: 417 VITYSIVIDKLCKSARVRDGCMLLKTMLERG 447



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 220/428 (51%), Gaps = 36/428 (8%)

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N ++    R      A  LF+      C PD  TY TL++G CK     +A  LLDEM+ 
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 256 DG----------------------------------CFPTPVTFNVLINGLCKNGELGRA 281
            G                                  C P+ +T+ +L++ LCK+  +  A
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
           + ++++M   GC PN VTYNTLI+G C  GN+D+AV L ++M+ + C P+  TY  +I+G
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
             K  R  DGA++L  M +     N   Y+TL+  L K GK  DA  L + M+ + CKP+
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
              ++ +ID  C+VG+ D A E+   M + GC  + +TY+ ++ G   + +   A ++ +
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            M +  C  + V Y+ ++ GLC+  ++ EA  V+  + + G   DVV  S++I GLC + 
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            +++A KL  EM      S PDV  Y IL++  CK   +  S+   + M+D+GC P ++T
Sbjct: 362 RLDDAEKLLREM--ERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 419

Query: 582 CNIFLTAL 589
            +I +  L
Sbjct: 420 YSIVIDKL 427


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 155/459 (33%), Positives = 248/459 (54%), Gaps = 9/459 (1%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +D   C     +FN+++N   ++G   R  +    +      +I PN +++N +++ +C+
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQG---RPGDCERLLETMAARDIQPNVVSYNGLLEGLCK 57

Query: 205 LGLVDNAIQLFREMPVRN--CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           L     A +L R+M  R     PD+ TY TL+ G CK  +++E+  LL E+   G  P  
Sbjct: 58  LERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA 117

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           + +  ++  LCK+  LG A +L++ M   GC P  +T+NTLI G C + NL+ A SLL +
Sbjct: 118 LMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQK 177

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M AS    + VTY T+++GL K GR  +  ++L  M+      +   YS+ + GL K GK
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYS 441
             DA ++ +QM +    PN V Y+ ++DGLC+ GK D A E++ +M + +GC  N   YS
Sbjct: 238 VLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +++ G  + G+  +A  + + MA+  C  + V YS L++GLC+ GK+ EA     +M   
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQS 558
           GCKP+ V Y S++HGLC+ G + EA ++  EM           P V TYN L+  LCK  
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAG 417

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
            I  ++     M  +GCDPD V+ +  +  L     A Q
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQ 456



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 156/446 (34%), Positives = 239/446 (53%), Gaps = 16/446 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   + K     +  RL  TM      +  V S+N +L  + +   +H A E    
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAAR-DIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++ +     P+ +T++ ++   C+ G V+ + +L +E+  R   PD   Y  ++  LCK
Sbjct: 71  MIS-RGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCK 129

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             RL EA+ LL+EM   GC PT +TFN LI+G C+   L  A  L+  M   G   + VT
Sbjct: 130 SARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVT 189

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTL+ GLC  G L +A  LL+RM AS C P+ V Y + + GL K G+ +D  +VL  M 
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMR 249

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKP 418
           +     N   Y+T++ GL K GK + A+++ +QM    GC  N V YS ++DGLC++G+ 
Sbjct: 250 DSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA  ++  M   GC  +  TYSSL+ G  ++GK  +AVE  ++MA   C  N V Y  L
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369

Query: 479 IHGLCEDGKLREARMVWTQM-----LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +HGLC  G+L EA  +  +M         C P V  Y+++I GLC AG +++ALK F  M
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRM 429

Query: 534 LCLEPKSQ---PDVFTYNILLNALCK 556
                +SQ   PD  +Y+ ++  L +
Sbjct: 430 -----RSQGCDPDGVSYSTIVEGLAR 450



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 207/456 (45%), Gaps = 61/456 (13%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   GC P  VTFN L+NG  K G  G   +L++ M  +   PN V+YN L+ GLC    
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 313 LDKAVSLLDRMVA--SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             +A  L+  M++   +  P+ VTY T+++G  K G+  +   +L  +  R    +  +Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 371 S-----------------------------------TLISGLFKEGKAEDAMKLWKQMME 395
           +                                   TLISG  +E   E A  L ++M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G K + V Y+ L+DGLC+ G+  EAE++L  M  +GCA +   YSS + G  +SGK   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSMI 514
           A ++ + M  ++   N V Y+ ++ GLC+ GK+  A  +  QM S  GC  +VV YS+++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GLC  G  +EA  +   M       +PDV TY+ L+N LCK   I  +++ +  M   G
Sbjct: 301 DGLCKLGRTQEARSVMEAM--ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358

Query: 575 CDPDLVT--------CNIFLTALKEKL------------EAPQDGTDFLNELAIRLFKRQ 614
           C P+ VT        C+    A  E++              P   + + N L   L K  
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTY-NALIGGLCKAG 417

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
           R     K  + M  +   P   ++  +V+ L R  R
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 161/284 (56%), Gaps = 9/284 (3%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K  V ++N++++ + + G    A +    +   K     P+ + ++  +  +C+ G V +
Sbjct: 184 KADVVTYNTLMDGLCKAGRLQEAEQLLERM---KASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLI 269
           A Q+  +M   + +P++ TY T++DGLCK  ++D A+ ++++M   DGC    V ++ ++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           +GLCK G    A  +++ M   GC P+ VTY++L++GLC  G +++AV  +  M    C 
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE-----YIYSTLISGLFKEGKAE 384
           PN VTY ++++GL   GR  +  R++  M       +        Y+ LI GL K G+ +
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRID 420

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           DA+K +++M  +GC P+ V YS +++GL R G+  +AE IL E+
Sbjct: 421 DALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 145/279 (51%), Gaps = 14/279 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +L+     +G  +  E +L RM+       VV   SF++     GK   V +A ++ 
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK---VLDAHQVL 245

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M D  H    V ++N++L+ + + G    ALE    + ++    +  N + ++ V+  
Sbjct: 246 EQMRDSHH-DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL--NVVGYSTVVDG 302

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+LG    A  +   M    C PD+ TY +L++GLCK  +++EAV  + EM ++GC P 
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKG-----CLPNEVTYNTLIHGLCLKGNLDKA 316
            VT+  L++GLC  G L  A ++V+ M   G     C P+  TYN LI GLC  G +D A
Sbjct: 363 AVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDA 422

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           +    RM +  C P+ V+Y TI+ GL + GRA+    +L
Sbjct: 423 LKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 21/192 (10%)

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +  C  N V ++ L++G  + G+  +   +   M +R  +P+VV+Y+ ++ GLC    
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
             EA +L  +M+    +S PD+ TY+ LL+  CK   +  S +LL  ++ RG  PD +  
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL-- 118

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                                 ++   L K  R     +++E M++    P   T+  ++
Sbjct: 119 -------------------MYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLI 159

Query: 643 QELCRPKRIQAA 654
              CR K ++ A
Sbjct: 160 SGCCREKNLEMA 171



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 6/189 (3%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E   S+   G   +G ST    +     + + +S+   + R      VV   S +     
Sbjct: 281 EQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLV---NG 337

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
             KA  +EEA+     M  E  CK    ++ S+++ +   G    A      + +     
Sbjct: 338 LCKAGKIEEAVEAVREMAME-GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGG 396

Query: 188 IL--PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
               P+  T+N +I  +C+ G +D+A++ F+ M  + C+PD  +Y T+++GL +  R  +
Sbjct: 397 HHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQ 456

Query: 246 AVLLLDEMQ 254
           A ++L E++
Sbjct: 457 AEMILSEVR 465


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 142/390 (36%), Positives = 222/390 (56%), Gaps = 8/390 (2%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T+  +I+ +C++  ++ A+    +M  +   PD+YTY  ++  LC ENRL EA   L+E
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M      P  VT+ VLI+GLCK G +  A  L+  M  K C+P  VTYN+LI GLC    
Sbjct: 72  MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAER 130

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
             +A  LL+ MV S C+P+  TY T+I G  K  ++ D  RV   +  R F  +   YS 
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           LI GL KEG+ ++A+ L+ +M++ G C PNTV Y++LI G CR+GK DEA  +L  M   
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G + +  TY++LM GF +  +   A ++   M +     + V ++ L+ GLC + +L +A
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK-LFNEMLCLEPKSQPDVFTYNIL 550
             +  +M  + C P V  Y++++ G C A  +EEA K +  EM C      P+V ++NI+
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC-----PPNVVSFNIM 365

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           +  LCK +  S +++L+     R C+PD+V
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVV 395



 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 148/492 (30%), Positives = 255/492 (51%), Gaps = 50/492 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           ++  + +   K   +E+A+     MV + FH    V ++ +V++ +  E   H A +F  
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFH--PDVYTYTAVIHALCVENRLHEARKFLE 70

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI-------------------------- 212
            + N    N+ PN +T+ ++I  +C+ G VD A+                          
Sbjct: 71  EMANR---NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCK 127

Query: 213 --------QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
                    L  EM    C PDI+TY TL+ G CK  + D+A+ + +++   G  P  VT
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           ++ LI+GLCK G L  A  L   M   G C+PN VTYN+LI G C  G +D+A++LL+RM
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             +   P+ VTY T++NG  KL R  D   +L  M  +    +   +++L+ GL +E + 
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            DA+ +  +M  K C P    Y+ ++DG CR  + +EA + + E ++  C  N  +++ +
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIM 365

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-G 502
           ++G  +  +  +A+E+ ++  +  C  + V Y+ +I GLC + K+ EA  V+ +ML   G
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C P+ + YS+++ GLCNAG ++ A         +E    P++ TYN+L++A  K +    
Sbjct: 426 CLPNSITYSTLVTGLCNAGMLDRARGY------IEKGCVPNIGTYNLLIDAFRKANRDED 479

Query: 563 SIDLLNSMMDRG 574
           + +LL+ M+ RG
Sbjct: 480 ARELLDDMVQRG 491



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 234/434 (53%), Gaps = 27/434 (6%)

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
           +C  D  TY +L+ GLCK  RL++A++ L +M   G  P   T+  +I+ LC    L  A
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            K ++ M  +   PN VTY  LI GLC  G +D+AV+LL +M   KC+P  VTY ++I+G
Sbjct: 66  RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISG 124

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L K  RA +   +L  M       + + Y+TLI+G  K  K++DA+++++Q++ +G +P+
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGFFESGKGHKAVEIW 460
            V YS LIDGLC+ G+  EA ++   MI +G C  N  TY+SL+ GF   GK  +A+ + 
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           + MA+     + V Y+ L++G C+  +L +A  +  QM  +G  PDVV ++S++ GLC  
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
             + +A+ +  EM        P V+TYN +L+  C+ + +  +   +   MD  C P++V
Sbjct: 305 NRLSDAVHILGEM--RRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVV 360

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
           + NI +                       L K  R+S   ++VE   ++  +P    +  
Sbjct: 361 SFNIMIRG---------------------LCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399

Query: 641 VVQELCRPKRIQAA 654
           V+  LCR K++  A
Sbjct: 400 VIDGLCREKKVDEA 413



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 177/348 (50%), Gaps = 19/348 (5%)

Query: 323 MVAS-KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           MVA+  C  + VTY ++I GL K+ R       L  M  + FH + Y Y+ +I  L  E 
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           +  +A K  ++M  +   PN V Y+ LIDGLC+ G+ DEA  +L +M    C   A TY+
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYN 119

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           SL+ G  ++ +  +A ++ ++M  + C+ +   Y+ LI G C+  K  +A  V+ Q+++R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G +PDVV YS +I GLC  G ++EA+ LF  M+       P+  TYN L++  C+   + 
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI-KSGSCMPNTVTYNSLISGFCRMGKMD 238

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------ 609
            +++LL  M + G  PD+VT    +     KL    D  D LN++  +            
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFC-KLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 610 ---LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              L +  R S    I+  M +K  SP   T+  ++   CR  +++ A
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA 345



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 130/305 (42%), Gaps = 76/305 (24%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K   ++EAI LF  M+    C     ++NS+++   + G    A+     +         
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS--- 253

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+  ++   C+L  +D+A  L  +M  +   PD+ T+ +LMDGLC+ENRL +AV +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 250 LDEMQ--------------VDG-------------------CFPTPVTFNVLINGLCKNG 276
           L EM+              +DG                   C P  V+FN++I GLCK  
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN 373

Query: 277 ELGRAAKLVDNMFLK------------------------------------GCLPNEVTY 300
               A +LV+    +                                    GCLPN +TY
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           +TL+ GLC  G LD+A   +++     C+PN  TY  +I+   K  R  D   +L  M +
Sbjct: 434 STLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489

Query: 361 RKFHV 365
           R F V
Sbjct: 490 RGFGV 494


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/390 (36%), Positives = 222/390 (56%), Gaps = 8/390 (2%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T+  +I+ +C++  ++ A+    +M  +   PD+YTY  ++  LC ENRL EA   L+E
Sbjct: 12  VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M      P  VT+ VLI+GLCK G +  A  L+  M  K C+P  VTYN+LI GLC    
Sbjct: 72  MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAER 130

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
             +A  LL+ MV S C+P+  TY T+I G  K  ++ D  RV   +  R F  +   YS 
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           LI GL KEG+ ++A+ L+ +M++ G C PNTV Y++LI G CR+GK DEA  +L  M   
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G + +  TY++LM GF +  +   A ++   M +     + V ++ L+ GLC + +L +A
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK-LFNEMLCLEPKSQPDVFTYNIL 550
             +  +M  + C P V  Y++++ G C A  +EEA K +  EM C      P+V ++NI+
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC-----PPNVVSFNIM 365

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           +  LCK +  S +++L+     R C+PD+V
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVV 395



 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 150/492 (30%), Positives = 258/492 (52%), Gaps = 50/492 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           ++  + +   K   +E+A+     MV + FH    V ++ +V++ +  E   H A +F  
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFH--PDVYTYTAVIHALCVENRLHEARKFLE 70

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI-------------------------- 212
            + N    N+ PN +T+ ++I  +C+ G VD A+                          
Sbjct: 71  EMANR---NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSLISGLCK 127

Query: 213 --------QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
                    L  EM    C PDI+TY TL+ G CK  + D+A+ + +++   G  P  VT
Sbjct: 128 AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVT 187

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           ++ LI+GLCK G L  A  L   M   G C+PN VTYN+LI G C  G +D+A++LL+RM
Sbjct: 188 YSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             +   P+ VTY T++NG  KL R  D   +L  M  +    +   +++L+ GL +E + 
Sbjct: 248 AETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRL 307

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            DA+ +  +M  K C P    Y+ ++DG CR  + +EA + + E ++  C  N  +++ +
Sbjct: 308 SDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIM 365

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-G 502
           ++G  +  +  +A+E+ ++  +  C  + V Y+ +I GLC + K+ EA  V+ +ML   G
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPG 425

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C P+ + YS++I GLCNAG ++ A + + E  C+     P++ TYN+L++A  K +    
Sbjct: 426 CLPNSITYSTLITGLCNAGMLDRA-RGYIEKGCV-----PNIGTYNLLIDAFRKANRDED 479

Query: 563 SIDLLNSMMDRG 574
           + +LL+ M+ RG
Sbjct: 480 ARELLDDMVQRG 491



 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 143/434 (32%), Positives = 234/434 (53%), Gaps = 27/434 (6%)

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
           +C  D  TY +L+ GLCK  RL++A++ L +M   G  P   T+  +I+ LC    L  A
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            K ++ M  +   PN VTY  LI GLC  G +D+AV+LL +M   KC+P  VTY ++I+G
Sbjct: 66  RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISG 124

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L K  RA +   +L  M       + + Y+TLI+G  K  K++DA+++++Q++ +G +P+
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGFFESGKGHKAVEIW 460
            V YS LIDGLC+ G+  EA ++   MI +G C  N  TY+SL+ GF   GK  +A+ + 
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLL 244

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           + MA+     + V Y+ L++G C+  +L +A  +  QM  +G  PDVV ++S++ GLC  
Sbjct: 245 ERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRE 304

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
             + +A+ +  EM        P V+TYN +L+  C+ + +  +   +   MD  C P++V
Sbjct: 305 NRLSDAVHILGEM--RRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVV 360

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
           + NI +                       L K  R+S   ++VE   ++  +P    +  
Sbjct: 361 SFNIMIRG---------------------LCKVNRSSEAMELVEEARRRRCNPDVVMYTT 399

Query: 641 VVQELCRPKRIQAA 654
           V+  LCR K++  A
Sbjct: 400 VIDGLCREKKVDEA 413



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 177/348 (50%), Gaps = 19/348 (5%)

Query: 323 MVAS-KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           MVA+  C  + VTY ++I GL K+ R       L  M  + FH + Y Y+ +I  L  E 
Sbjct: 1   MVATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVEN 60

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           +  +A K  ++M  +   PN V Y+ LIDGLC+ G+ DEA  +L +M    C   A TY+
Sbjct: 61  RLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYN 119

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           SL+ G  ++ +  +A ++ ++M  + C+ +   Y+ LI G C+  K  +A  V+ Q+++R
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G +PDVV YS +I GLC  G ++EA+ LF  M+       P+  TYN L++  C+   + 
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI-KSGSCMPNTVTYNSLISGFCRMGKMD 238

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------ 609
            +++LL  M + G  PD+VT    +     KL    D  D LN++  +            
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFC-KLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 610 ---LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              L +  R S    I+  M +K  SP   T+  ++   CR  +++ A
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA 345



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 129/303 (42%), Gaps = 76/303 (25%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K   ++EAI LF  M+    C     ++NS+++   + G    A+     +         
Sbjct: 197 KEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSS--- 253

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+  ++   C+L  +D+A  L  +M  +   PD+ T+ +LMDGLC+ENRL +AV +
Sbjct: 254 PDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHI 313

Query: 250 LDEMQ--------------VDG-------------------CFPTPVTFNVLINGLCKNG 276
           L EM+              +DG                   C P  V+FN++I GLCK  
Sbjct: 314 LGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVN 373

Query: 277 ELGRAAKLVDNMFLK------------------------------------GCLPNEVTY 300
               A +LV+    +                                    GCLPN +TY
Sbjct: 374 RSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITY 433

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           +TLI GLC  G LD+A   +++     C+PN  TY  +I+   K  R  D   +L  M +
Sbjct: 434 STLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQ 489

Query: 361 RKF 363
           R F
Sbjct: 490 RGF 492


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 160/542 (29%), Positives = 276/542 (50%), Gaps = 22/542 (4%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE--GLYHRALEFYN 178
           F  + K+Y   +++++A+   + +         V S+NSVL+ I++    +   A E Y 
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTIN-LAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++ ++   + PN  T+N++I+  C +G +   +  F EM    C P++ TY TL+D  C
Sbjct: 204 EMIRSR---VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K  R+DEA  LL  M   G  P  +++NV+INGLC+ G +  A ++++ M  KG  P+EV
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TYNTL++G C +GN  +A+ +   MV +   P+ VTY  +IN + K             M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             R    NE  Y+TLI G  ++G   +A ++  +M E G  P+ V Y+A I G C + + 
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           +EA  ++ EM+  G A +  +YS+++ GF   G+  +A ++ ++M +     + V YS L
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 500

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I GLCE  +L EA  +  +ML  G  PD   Y+++I+  C  G + +AL L +EM  +  
Sbjct: 501 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM--IHK 558

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PD  TY++L+N L KQ+    +  LL  ++     P  VT +  +          ++
Sbjct: 559 GFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI----------EN 608

Query: 599 GTDFLNELAIRLFKRQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            ++   +  + L K     G      ++ E M+++   P  + +  ++   CR   +  A
Sbjct: 609 CSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKA 668

Query: 655 IN 656
            N
Sbjct: 669 FN 670



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 246/484 (50%), Gaps = 24/484 (4%)

Query: 125 FKAYGKAHLVEEAIRL----------FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           FK Y  A  + + + L          F  + D +H      S ++V +++++    +  L
Sbjct: 102 FKLYKTAQTLAQELALSASDPSGSSIFQCLKDSYH---VYNSSSAVFDLMVKS---YSHL 155

Query: 175 EFYNHIVN----AKHMNILPNTLTFNLVIKTVCR-LGLVD-NAIQLFREMPVRNCEPDIY 228
              +  VN    AK    +P  L++N V+  + R  G V  +A +++REM      P++Y
Sbjct: 156 NMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVY 215

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY  L+ G C    L + +    EM+ +GC P  VT+N LI+  CK G +  A  L+ +M
Sbjct: 216 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 275

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             KG  PN ++YN +I+GLC +G++ +A  +L+ M      P+EVTY T++NG  K G  
Sbjct: 276 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 335

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                +   M       +   Y+ LI+ + K      AM+ + QM  +G +PN   Y+ L
Sbjct: 336 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 395

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           IDG  R G  +EA  IL EM  +G + +  TY++ + G     +  +A+ + ++M +   
Sbjct: 396 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 455

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + V YS +I G C  G+L  A  +  +M+ +G  PD V YSS+I GLC    + EA  
Sbjct: 456 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 515

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L  EML  +    PD FTY  L+NA C + +++ ++ L + M+ +G  PD VT ++ +  
Sbjct: 516 LSQEML--DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLING 573

Query: 589 LKEK 592
           L ++
Sbjct: 574 LNKQ 577



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 140/455 (30%), Positives = 239/455 (52%), Gaps = 20/455 (4%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C   V ++N++++   + G   R  E +  + +     + PN +++N++I  +CR G + 
Sbjct: 245 CLPNVVTYNTLIDAYCKMG---RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMK 301

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
            A ++  EM  +   PD  TY TL++G CKE    +A+++  EM  +G  P+ VT+  LI
Sbjct: 302 EAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 361

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           N +CK   L RA +  D M ++G  PNE TY TLI G   +G L++A  +L+ M  S   
Sbjct: 362 NSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 421

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+ VTY   I+G   L R  +   V+  M E+    +   YST+ISG  ++G+ + A ++
Sbjct: 422 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 481

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            ++M+EKG  P+ V YS+LI GLC + +  EA ++  EM++ G   + FTY++L+  +  
Sbjct: 482 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 541

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G  +KA+ +  +M     + + V YSVLI+GL +  + REA+ +  +++     P  V 
Sbjct: 542 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVT 601

Query: 510 YSSMIH---------------GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           Y ++I                G C  G + EA ++F  M  +E   +P    YN++++  
Sbjct: 602 YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM--VERNHKPGEAVYNVIIHGH 659

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           C+  N+  + +L   M+  G  P  VT    + AL
Sbjct: 660 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 694



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 225/438 (51%), Gaps = 20/438 (4%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++LN   +EG +H+AL  +  +V      + P+ +T+  +I ++C+   ++ A++ F
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRN---GVSPSVVTYTALINSMCKARNLNRAMEFF 377

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M +R   P+  TY TL+DG  ++  L+EA  +L+EM   G  P+ VT+N  I+G C  
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +  A  +V  M  KG  P+ V+Y+T+I G C KG LD+A  +   MV     P+ VTY
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++I GL ++ R  +   +   M +     +E+ Y+TLI+    EG    A+ L  +M+ 
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM----------- 444
           KG  P+ V YS LI+GL +  +  EA+ +LF++I      +  TY +L+           
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 617

Query: 445 ----KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
               KGF   G  H+A  +++ M + N    E  Y+V+IHG C  G L +A  ++ +M+ 
Sbjct: 618 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 677

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  P  V   ++I  L   G  EE  ++  + L     ++ ++    + +N   K+ N+
Sbjct: 678 SGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAKVLVEINH--KEGNM 735

Query: 561 SHSIDLLNSMMDRGCDPD 578
              +++L  M   G  P+
Sbjct: 736 EAVLNVLTDMAKDGLLPN 753



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 206/438 (47%), Gaps = 21/438 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  Y   G+F    ++   M R        ++  +  +  KA  +  A+  F  M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                 +   +++ ++++   ++GL + A    N +  +      P+ +T+N  I   C 
Sbjct: 381 RIR-GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES---GFSPSVVTYNAFIHGHCV 436

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           L  ++ A+ + +EM  +   PD+ +Y T++ G C++  LD A  +  EM   G  P  VT
Sbjct: 437 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 496

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LI GLC+   L  A  L   M   G  P+E TY TLI+  C++G+L+KA+ L D M+
Sbjct: 497 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 556

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS--------- 375
               +P+ VTY  +INGL K  R  +  R+L  +   +   ++  Y TLI          
Sbjct: 557 HKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKS 616

Query: 376 ------GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
                 G   +G   +A ++++ M+E+  KP   VY+ +I G CR G   +A  +  EMI
Sbjct: 617 VVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMI 676

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV-CYSVLIHGLCEDGKL 488
           ++G   +  T  +L+K  F+ G   +  E+  D  + +C  NE     VL+    ++G +
Sbjct: 677 HSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR-SCRLNEAELAKVLVEINHKEGNM 735

Query: 489 REARMVWTQMLSRGCKPD 506
                V T M   G  P+
Sbjct: 736 EAVLNVLTDMAKDGLLPN 753



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 158/378 (41%), Gaps = 70/378 (18%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF---IFIFKAYGKAHLV----E 135
           + T+ +LI  ++  G       +L  M        E  F   +  + A+   H V    E
Sbjct: 389 ERTYTTLIDGFSRQGLLNEAYRILNEMT-------ESGFSPSVVTYNAFIHGHCVLERME 441

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ +   MV++      V S++++++   ++G   RA +    +V      + P+ +T+
Sbjct: 442 EALGVVQEMVEKGLAPDVV-SYSTIISGFCRKGELDRAFQMKQEMVEK---GVSPDAVTY 497

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           + +I+ +C +  +  A  L +EM      PD +TY TL++  C E  L++A+ L DEM  
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557

Query: 256 DGCFPTPVTFNVLINGL----------------------------------CKNGELGRA 281
            G  P  VT++VLINGL                                  C N E    
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 617

Query: 282 AKLVDNMFLKGCL----------------PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             L+    +KG +                P E  YN +IHG C  GNL KA +L   M+ 
Sbjct: 618 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 677

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY-IYSTLISGLFKEGKAE 384
           S  +P+ VT  T+I  L K G   + + V+     R   +NE  +   L+    KEG  E
Sbjct: 678 SGFVPHTVTVITLIKALFKEGMNEEMSEVIGDT-LRSCRLNEAELAKVLVEINHKEGNME 736

Query: 385 DAMKLWKQMMEKGCKPNT 402
             + +   M + G  PN+
Sbjct: 737 AVLNVLTDMAKDGLLPNS 754


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 270/512 (52%), Gaps = 51/512 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+ LF  MV        ++ F+ +L+ I +   +   +     + N   + I  N  
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQN---LGIPHNHY 117

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T++++I   CR   +  A+ +  +M     EP+I T  +L++G C   R+ EAV L+D+M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
            V G  P  VTFN LI+GL  + +   A  L+D M  KGC P+ VTY  +++GLC +G+ 
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKL---------------------------- 345
           D A +LL++M   K  P  + Y TII+GL K                             
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297

Query: 346 -------GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
                  GR  D +R+L  M ERK + + + +S LI    KEGK  +A KL+ +M+++  
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ V YS+LI+G C   + DEA+++   M++  C  +  TY++L+KGF +  +  + +E
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++++M++   V N V Y++LI GL + G    A+ ++ +M+S G  P+++ Y++++ GLC
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E+A+ +F  +     K +P ++TYNI++  +CK   +    DL  ++  +G  PD
Sbjct: 478 KNGKLEKAMVVFEYLQ--RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535

Query: 579 LVTCNIFLTAL-----KEKLEA-----PQDGT 600
           +V  N  ++       KE+ +A      +DGT
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567



 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 252/480 (52%), Gaps = 26/480 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  +  +V ++     P+ + F+ ++  + ++   D  I L  +M       + YTY  
Sbjct: 65  AVALFGEMVKSRP---FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C+ ++L  A+ +L +M   G  P  VT + L+NG C +  +  A  LVD MF+ G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN VT+NTLIHGL L     +A++L+DRMVA  C P+ VTYG ++NGL K G      
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  ME+ K      IY+T+I GL K    +DA+ L+K+M  KG +PN V YS+LI  L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+  +A  +L +MI      + FT+S+L+  F + GK  +A +++ +M K +   + 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V YS LI+G C   +L EA+ ++  M+S+ C PDVV Y+++I G C    VEE +++F E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   +     +  TYNIL+  L +  +   + ++   M+  G  P+++T N  L      
Sbjct: 422 M--SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL------ 473

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                DG          L K  +      + E + +  + P   T+  +++ +C+  +++
Sbjct: 474 -----DG----------LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 243/468 (51%), Gaps = 6/468 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y  +  + EA+ L   M    +   TV +FN++++ +    L+++A E    I   
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTV-TFNTLIHGLF---LHNKASEAMALIDRM 212

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P+ +T+ +V+  +C+ G  D A  L  +M     EP +  Y T++DGLCK   +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A+ L  EM+  G  P  VT++ LI+ LC  G    A++L+ +M  +   P+  T++ L
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I     +G L +A  L D MV     P+ VTY ++ING     R  +  ++   M  +  
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TLI G  K  + E+ M+++++M ++G   NTV Y+ LI GL + G  D A+E
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           I  EM+++G   N  TY++L+ G  ++GK  KA+ +++ + ++        Y+++I G+C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK+ +   ++  +  +G KPDVVAY++MI G C  GS EEA  LF EM   E  + P+
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM--KEDGTLPN 570

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
              YN L+ A  +  +   S +L+  M   G   D  T  +    L +
Sbjct: 571 SGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/463 (26%), Positives = 213/463 (46%), Gaps = 53/463 (11%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D+A+ LF EM      P I  +  L+  + K N+ D  + L ++MQ  G      T+++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LIN  C+  +L  A  ++  M   G  PN VT ++L++G C    + +AV+L+D+M  + 
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN VT+                                   +TLI GLF   KA +AM
Sbjct: 182 YQPNTVTF-----------------------------------NTLIHGLFLHNKASEAM 206

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L  +M+ KGC+P+ V Y  +++GLC+ G  D A  +L +M           Y++++ G 
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            +      A+ ++K+M       N V YS LI  LC  G+  +A  + + M+ R   PDV
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
             +S++I      G + EA KL++EM  ++    P + TY+ L+N  C    +  +  + 
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFK 612
             M+ + C PD+VT N  +     K +  ++G +   E++ R               LF+
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFC-KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                   +I + M+   + P   T+  ++  LC+  +++ A+
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 23/240 (9%)

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K D+A  +  EM+ +    +   +S L+    +  K    + + + M      +N   YS
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +LI+  C   +L  A  V  +M+  G +P++V  SS+++G C++  + EA+ L ++M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV- 179

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
               QP+  T+N L++ L   +  S ++ L++ M+ +GC PDLVT  + +  L       
Sbjct: 180 -TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL------- 231

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                          KR  T   F ++  M Q  L P    +  ++  LC+ K +  A+N
Sbjct: 232 --------------CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 161/508 (31%), Positives = 263/508 (51%), Gaps = 40/508 (7%)

Query: 181 VNAKHMNILP-----------NTLTFNLVIKTVCRLGLVDNAIQLFR-EMPVRNCEPDIY 228
           +N + +N+ P           +   +N+V++++CR G    A+++FR EM      P I 
Sbjct: 23  INTQRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIV 82

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY T+++GLCK N L   + L +E+   G  P  VT+N LI+ LCK G+L  A +L   M
Sbjct: 83  TYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGM 142

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC--MPNEVTYGTIINGLVKLG 346
             +GC+PN VTY+ LI+GLC  G +D+A  L+  M    C  +PN +TY + ++GL K  
Sbjct: 143 SSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQS 202

Query: 347 RAVDGARVLMSMEERKFHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
              +   ++ S+ +    V  +   +STLI GL K G+ ++A      M+  G  PN V 
Sbjct: 203 MTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVT 260

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+AL++GLC+  K + A  ++  M++ G   +  TYS L+  F ++ +  +A+E+   MA
Sbjct: 261 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 320

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
              C  N V ++ +I GLC+  +  EA  +  Q+ +R   PD V ++ +I G C AG+ E
Sbjct: 321 SRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFE 380

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           +A  LF EM  +    QPDV T+  L++ LCK   +  + D+L+ M + G  P++VT N+
Sbjct: 381 QASALFEEM--VAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNV 438

Query: 585 FLTAL--KEKLEAPQDGTDFLNE---------------LAIRLFKRQRTSGGFKIVEVML 627
            +  L    ++E P    +FL E               L   L +  RT    ++V  + 
Sbjct: 439 LVHGLCKSGRIEEP---CEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLK 495

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAAI 655
                P T T+  +V  L +  + + AI
Sbjct: 496 SFGWDPDTVTYNILVDGLWKSGKTEQAI 523



 Score =  258 bits (658), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 170/581 (29%), Positives = 294/581 (50%), Gaps = 19/581 (3%)

Query: 16  TNSAMKMKTLSLTTIPSERSH----RFFSVRSAVSSNKQMETEPQGNAKS-EQPFSDEIF 70
           T +A  +  ++  TI ++R +    +FF VRS+  S        Q   ++ E   + EIF
Sbjct: 9   TAAANLLVPITTATINTQRVNLCPLKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIF 68

Query: 71  NSTPKLGSYQLGDSTFYSLIQHYANSGDFKS-LEMV--LYRMRREKRVVLEKSFIFIFKA 127
                         T+ ++I     S +  + +E+   L +      VV   + I    +
Sbjct: 69  RGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLI---DS 125

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
             KA  +EEA RL H  +    C   V +++ ++N + + G    A E    +   K  +
Sbjct: 126 LCKAGDLEEARRL-HGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTR-KSCD 183

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREM--PVRNCEPDIYTYCTLMDGLCKENRLDE 245
           +LPN +T+N  +  +C+  +   A +L R +        PD  T+ TL+DGLCK  + DE
Sbjct: 184 VLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDE 243

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A    D+M   G  P  VT+N L+NGLCK  ++ RA  ++++M  KG  P+ +TY+ L+ 
Sbjct: 244 ACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVD 301

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
             C    +D+A+ LL  M +  C PN VT+ +II+GL K  R+ +  ++ + +  R    
Sbjct: 302 AFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVP 361

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           ++  ++ LI+G  K G  E A  L+++M+ K  +P+ + + ALIDGLC+ G+ + A +IL
Sbjct: 362 DKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDIL 421

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M N G   N  TY+ L+ G  +SG+  +  E  ++M  + CV   + Y  L++ LC  
Sbjct: 422 DLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRA 481

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            +  +A  + +++ S G  PD V Y+ ++ GL  +G  E+A+ +  EM  +    QPD F
Sbjct: 482 SRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM--VGKGHQPDSF 539

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           T+      L +  N++ +++LL  ++ +G  PD  TC+  L
Sbjct: 540 TFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 175/349 (50%), Gaps = 12/349 (3%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           +DE  N     G Y     T+ +L+     +   +    ++  M  +       ++  + 
Sbjct: 241 TDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLV 300

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG----LYHRALEFYNHIV 181
            A+ KA  V+EA+ L H M     C   V +FNS+++ + +       +  AL+ YN + 
Sbjct: 301 DAFCKASRVDEALELLHGMASR-GCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM- 358

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
                 ++P+ +TFN++I   C+ G  + A  LF EM  +N +PD+ T+  L+DGLCK  
Sbjct: 359 ------LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAG 412

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +++ A  +LD M   G  P  VT+NVL++GLCK+G +    + ++ M   GC+P  +TY 
Sbjct: 413 QVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYG 472

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           +L++ LC     D A+ L+ ++ +    P+ VTY  +++GL K G+      VL  M  +
Sbjct: 473 SLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 532

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
               + + ++    GL + G     M+L + ++ KG  P+    S+++D
Sbjct: 533 GHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 246/464 (53%), Gaps = 21/464 (4%)

Query: 134 VEEAIRLFHTMV------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           +EE ++    M+      D   C   ++ F        + G   +A      + N+    
Sbjct: 122 LEEGLKFLERMIYQGDIPDVIACTSLIRGF-------CRSGKTKKATRIMEILENS---G 171

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
            +P+ +T+N++I   C+ G +D A+++   M V    PD+ TY T++  LC   +L EA+
Sbjct: 172 AVPDVITYNVLIGGYCKSGEIDKALEVLERMSV---APDVVTYNTILRSLCDSGKLKEAM 228

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            +LD      C+P  +T+ +LI   C +  +G+A KL+D M  KGC P+ VTYN LI+G+
Sbjct: 229 EVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 288

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C +G LD+A+  L+ M +  C PN +T+  I+  +   GR +D  R+L  M  +    + 
Sbjct: 289 CKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSV 348

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             ++ LI+ L ++     A+ + ++M + GC PN++ Y+ L+ G C+  K D A E L  
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M++ GC  +  TY++L+    + GK   AVEI   ++   C    + Y+ +I GL + GK
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 468

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
              A  +  +M  +G KPD++ YS+++ GL   G V+EA+K+F++M  L  K  P   TY
Sbjct: 469 TEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIK--PSAVTY 526

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           N ++  LCK    S +ID L  M+++GC P   T  I +  + +
Sbjct: 527 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 236/435 (54%), Gaps = 13/435 (2%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SLI+ +  SG  K    ++  +     V    ++  +   Y K+  +++A+ +   M   
Sbjct: 146 SLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM--- 202

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
                 V ++N++L  +   G    A+E  +  +  +     P+ +T+ ++I+  C    
Sbjct: 203 -SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRE---CYPDVITYTILIEATCNDSG 258

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V  A++L  EM  + C+PD+ TY  L++G+CKE RLDEA+  L+ M   GC P  +T N+
Sbjct: 259 VGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNI 318

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           ++  +C  G    A +L+ +M  KGC P+ VT+N LI+ LC K  L +A+ +L++M    
Sbjct: 319 ILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378

Query: 328 CMPNEVTYGTIINGLV---KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           C+PN ++Y  +++G     K+ RA++   +++S   R  + +   Y+TL++ L K+GK +
Sbjct: 379 CVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVS---RGCYPDIVTYNTLLTALCKDGKVD 435

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+++  Q+  KGC P  + Y+ +IDGL +VGK + A E+L EM   G   +  TYS+L+
Sbjct: 436 AAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLL 495

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +G    GK  +A++I+ DM   +   + V Y+ ++ GLC+  +   A      M+ +GCK
Sbjct: 496 RGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCK 555

Query: 505 PDVVAYSSMIHGLCN 519
           P    Y+ +I G+ +
Sbjct: 556 PTEATYTILIEGIAD 570



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 124/462 (26%), Positives = 243/462 (52%), Gaps = 19/462 (4%)

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N+ ++ + R G ++  ++    M  +   PD+    +L+ G C+  +  +A  +++ ++ 
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P  +T+NVLI G CK+GE+ +A ++++ M +    P+ VTYNT++  LC  G L +
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKE 226

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+ +LDR +  +C P+ +TY  +I             ++L  M ++    +   Y+ LI+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G+ KEG+ ++A+K    M   GCKPN + ++ ++  +C  G+  +AE +L +M+  GC+ 
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  T++ L+          +A+++ + M K+ CV N + Y+ L+HG C++ K+  A    
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYL 406

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M+SRGC PD+V Y++++  LC  G V+ A+++ N++        P + TYN +++ L 
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQL--SSKGCSPVLITYNTVIDGLT 464

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF------------- 602
           K     ++++LL  M  +G  PD++T +  L  L  + +  +    F             
Sbjct: 465 KVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAV 524

Query: 603 -LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
             N + + L K Q+TS     +  M++K   P  +T+  +++
Sbjct: 525 TYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 220/428 (51%), Gaps = 27/428 (6%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L +   L+E +  L+ M   G  P  +    LI G C++G+  +A ++++ +   G +P+
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            +TYN LI G C  G +DKA+ +L+RM  +   P+ VTY TI+  L   G+  +   VL 
Sbjct: 176 VITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKEAMEVLD 232

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
              +R+ + +   Y+ LI     +     AMKL  +M +KGCKP+ V Y+ LI+G+C+ G
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + DEA + L  M + GC  N  T++ +++    +G+   A  +  DM +  C  + V ++
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +LI+ LC    L  A  V  +M   GC P+ ++Y+ ++HG C    ++ A++    M  +
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIM--V 410

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                PD+ TYN LL ALCK   +  ++++LN +  +GC P L+T N  +          
Sbjct: 411 SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVI---------- 460

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            DG          L K  +T    +++E M +K L P   T+  +++ L R  ++  AI 
Sbjct: 461 -DG----------LTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAI- 508

Query: 657 KCWSNLYG 664
           K + ++ G
Sbjct: 509 KIFHDMEG 516



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 201/365 (55%), Gaps = 4/365 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++++   +SG  K    VL R  + +      ++  + +A      V +A++L   M
Sbjct: 210 TYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM 269

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +  CK  V ++N ++N I +EG    A++F N   N       PN +T N++++++C 
Sbjct: 270 RKK-GCKPDVVTYNVLINGICKEGRLDEAIKFLN---NMPSYGCKPNVITHNIILRSMCS 325

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G   +A +L  +M  + C P + T+  L++ LC++  L  A+ +L++M   GC P  ++
Sbjct: 326 TGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLS 385

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++G C+  ++ RA + ++ M  +GC P+ VTYNTL+  LC  G +D AV +L+++ 
Sbjct: 386 YNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLS 445

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  C P  +TY T+I+GL K+G+      +L  M  +    +   YSTL+ GL +EGK +
Sbjct: 446 SKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVD 505

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+K++  M     KP+ V Y+A++ GLC+  +   A + L  M+  GC     TY+ L+
Sbjct: 506 EAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILI 565

Query: 445 KGFFE 449
           +G  +
Sbjct: 566 EGIAD 570



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/308 (29%), Positives = 160/308 (51%), Gaps = 32/308 (10%)

Query: 355 LMSMEERKFHVN------EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
           ++ ME     VN      E+  +  +  L + G+ E+ +K  ++M+ +G  P+ +  ++L
Sbjct: 88  VIGMESSPIGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSL 147

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I G CR GK  +A  I+  + N+G   +  TY+ L+ G+ +SG+  KA+E+ + M+    
Sbjct: 148 IRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---V 204

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + V Y+ ++  LC+ GKL+EA  V  + L R C PDV+ Y+ +I   CN   V +A+K
Sbjct: 205 APDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMK 264

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L +EM   +   +PDV TYN+L+N +CK+  +  +I  LN+M   GC P+++T NI L +
Sbjct: 265 LLDEMR--KKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRS 322

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
           +                         R     +++  ML+K  SP   T+  ++  LCR 
Sbjct: 323 M---------------------CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRK 361

Query: 649 KRIQAAIN 656
           + +  AI+
Sbjct: 362 RLLGRAID 369


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  263 bits (671), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 141/421 (33%), Positives = 233/421 (55%), Gaps = 6/421 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P+ +T+N++I   C+ G +DNA+Q+   M   N  PD+ TY T++  LC   +L +A+ 
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +LD      C+P  +T+ +LI   CK   +G+A KL+D M  KG  P+ VTYN LI+G+C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +G LD+A+  L+ M +  C PN +T+  I+  +   GR +D  ++L  M  +    +  
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ LI+ L ++G    A+ + ++M   GC PN++ Y+ L+ G C+  K D A E L  M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ GC  +  TY++L+    + GK   AVEI   ++   C    + Y+ +I GL + GK 
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  +M  +G KPD++ YSS++ GL   G V+EA+K F+++  L  +  P+  TYN
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIR--PNAITYN 535

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            ++  LCK      +ID L  M+ + C P   T  I +  +  +  A ++  D LNEL  
Sbjct: 536 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA-KEALDLLNELCS 594

Query: 609 R 609
           R
Sbjct: 595 R 595



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 228/416 (54%), Gaps = 10/416 (2%)

Query: 162 NVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR 221
           NV+I    Y ++ E  N +     MN+ P+ +T+N +++T+C  G +  A+++      +
Sbjct: 188 NVLISG--YCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 245

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
            C PD+ TY  L++  CKE+ + +A+ LLDEM+  G  P  VT+NVLING+CK G L  A
Sbjct: 246 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 305

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            K ++NM   GC PN +T+N ++  +C  G    A  LL  M+   C P+ VT+  +IN 
Sbjct: 306 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 365

Query: 342 LVK---LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           L +   LGRA+D   +L  M       N   Y+ L+ G  KE K + A++    M+ +GC
Sbjct: 366 LCRQGLLGRAID---ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 422

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ V Y+ L+  LC+ GK D A EIL ++ + GC+    TY++++ G  + GK  +A++
Sbjct: 423 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 482

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +  +M +     + + YS L+ GL  +GK+ EA   +  +   G +P+ + Y+S++ GLC
Sbjct: 483 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 542

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            +   + A+     M  +  + +P   TY IL+  +  +     ++DLLN +  RG
Sbjct: 543 KSRQTDRAIDFLAYM--ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 243/449 (54%), Gaps = 13/449 (2%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SLI+ +   G  K    V+  + +   V    ++  +   Y K+  ++ A+++     D 
Sbjct: 154 SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVL----DR 209

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
            +    V ++N++L  +   G   +A+E  +  +  +     P+ +T+ ++I+  C+   
Sbjct: 210 MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE---CYPDVITYTILIEATCKESG 266

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V  A++L  EM  +  +PD+ TY  L++G+CKE RLDEA+  L+ M   GC P  +T N+
Sbjct: 267 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 326

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           ++  +C  G    A KL+ +M  KGC P+ VT+N LI+ LC +G L +A+ +L++M    
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 386

Query: 328 CMPNEVTYGTIINGLV---KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           C PN ++Y  +++G     K+ RA++   +++S   R  + +   Y+TL++ L K+GK +
Sbjct: 387 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS---RGCYPDIVTYNTLLTALCKDGKVD 443

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+++  Q+  KGC P  + Y+ +IDGL +VGK + A ++L EM   G   +  TYSSL+
Sbjct: 444 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 503

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G    GK  +A++ + D+       N + Y+ ++ GLC+  +   A      M+S+ CK
Sbjct: 504 SGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCK 563

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           P    Y+ +I G+   G  +EAL L NE+
Sbjct: 564 PTEATYTILIEGIAYEGLAKEALDLLNEL 592



 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 223/418 (53%), Gaps = 7/418 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y  SG+  +   VL RM     VV   + +      GK   +++A+ +    
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGK---LKQAMEVLDRQ 242

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +  C   V ++  ++    +E    +A++  + + N       P+ +T+N++I  +C+
Sbjct: 243 LQK-ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK---PDVVTYNVLINGICK 298

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +D AI+    MP   C+P++ T+  ++  +C   R  +A  LL +M   GC P+ VT
Sbjct: 299 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 358

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN+LIN LC+ G LGRA  +++ M + GC PN ++YN L+HG C +  +D+A+  LD MV
Sbjct: 359 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 418

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  C P+ VTY T++  L K G+      +L  +  +        Y+T+I GL K GK E
Sbjct: 419 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 478

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+KL  +M  KG KP+ + YS+L+ GL R GK DEA +   ++   G   NA TY+S+M
Sbjct: 479 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 538

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
            G  +S +  +A++    M    C   E  Y++LI G+  +G  +EA  +  ++ SRG
Sbjct: 539 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 596



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 238/458 (51%), Gaps = 26/458 (5%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           ++ + R G +++  +    M  R   PDI    +L+ G C+  +  +A  +++ ++  G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  +T+NVLI+G CK+GE+  A +++D M +    P+ VTYNT++  LC  G L +A+ 
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAME 237

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +LDR +  +C P+ +TY  +I    K        ++L  M  +    +   Y+ LI+G+ 
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           KEG+ ++A+K    M   GC+PN + ++ ++  +C  G+  +AE++L +M+  GC+ +  
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ L+      G   +A++I + M  + C  N + Y+ L+HG C++ K+  A      M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +SRGC PD+V Y++++  LC  G V+ A+++ N++        P + TYN +++ L K  
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL--SSKGCSPVLITYNTVIDGLSKVG 475

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
               +I LL+ M  +G  PD++T +  ++ L  + +  +         AI+ F      G
Sbjct: 476 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE---------AIKFFHDLEGLG 526

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                       + P   T+  ++  LC+ ++   AI+
Sbjct: 527 ------------IRPNAITYNSIMLGLCKSRQTDRAID 552



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 215/385 (55%), Gaps = 4/385 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++++   +SG  K    VL R  +++      ++  + +A  K   V +A++L   M
Sbjct: 218 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 277

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++   K  V ++N ++N I +EG    A++F N   N       PN +T N++++++C 
Sbjct: 278 RNK-GSKPDVVTYNVLINGICKEGRLDEAIKFLN---NMPSYGCQPNVITHNIILRSMCS 333

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G   +A +L  +M  + C P + T+  L++ LC++  L  A+ +L++M + GC P  ++
Sbjct: 334 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 393

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++G CK  ++ RA + +D M  +GC P+ VTYNTL+  LC  G +D AV +L+++ 
Sbjct: 394 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 453

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  C P  +TY T+I+GL K+G+     ++L  M  +    +   YS+L+SGL +EGK +
Sbjct: 454 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 513

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+K +  +   G +PN + Y++++ GLC+  + D A + L  MI+  C     TY+ L+
Sbjct: 514 EAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 573

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCV 469
           +G    G   +A+++  ++     V
Sbjct: 574 EGIAYEGLAKEALDLLNELCSRGLV 598


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  262 bits (670), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 151/423 (35%), Positives = 228/423 (53%), Gaps = 9/423 (2%)

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           G  H ALE    +   K     P+  T   +I  +   G +D A+   R M    C+P++
Sbjct: 4   GDLHAALELLEEM---KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            TY  L+    +  +L+EA+ LL+EM+  GC P  VT+NVL++ LCK   +G A  +V  
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   G  PN +T+N+L+ G C +GN+D A  LL  MVA    PN VTY  +I+GL K  +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
            ++   VL  M+      + + YS LI GL K  K E+A ++ ++M   GC P+ VVYS+
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I   C+ GK  EA++ L EM     + +  TY++++ G  + GK  +A  I   M ++ 
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG 297

Query: 468 CVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
            V  +V  YS +I+GLC+   L EA+ +  +M   GC PDVV Y+++I GLC  G +EEA
Sbjct: 298 DVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEA 357

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             L   M        P+V TY  L++ LCK   +  +  ++  M + GC P+LVT N  +
Sbjct: 358 EYLLQGM--KRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMV 415

Query: 587 TAL 589
             L
Sbjct: 416 NGL 418



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/487 (29%), Positives = 244/487 (50%), Gaps = 43/487 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T   +I   AN+GD       L  M  +  VV   ++  +  A+ +A  +EEA++L   M
Sbjct: 27  THTPIITAMANAGDLDGAMDHLRSMGCDPNVV---TYTALIAAFARAKKLEEAMKLLEEM 83

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                                                  +     PN +T+N+++  +C+
Sbjct: 84  ---------------------------------------RERGCPPNLVTYNVLVDALCK 104

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           L +V  A  + ++M      P++ T+ +L+DG CK   +D+A  LL  M   G  P  VT
Sbjct: 105 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVT 164

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LI+GLCK+ +   A ++++ M   G  P+  TY+ LIHGLC    +++A  +L RM 
Sbjct: 165 YSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA 224

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            S C P+ V Y +II+   K G+ ++  + L  M +++   +   Y+T+I GL K GK  
Sbjct: 225 GSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIA 284

Query: 385 DAMKLWKQMMEKG-CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +A  +  QM E G   P+ V YS +I+GLC+     EA+++L  M   GC  +  TY+++
Sbjct: 285 EAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTI 344

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  + G+  +A  + + M +  C  N V Y+ LI GLC+  K+ EA  V  +M + GC
Sbjct: 345 IDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGC 404

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P++V Y++M++GLC +G ++EA +L   M     +  PD  TY  ++NAL     +  +
Sbjct: 405 PPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEA 464

Query: 564 IDLLNSM 570
             LL  M
Sbjct: 465 EQLLEQM 471



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/433 (33%), Positives = 215/433 (49%), Gaps = 22/433 (5%)

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           C    L  A+ LL+EM+  G  P   T   +I  +   G+L  A   +D++   GC PN 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           VTY  LI        L++A+ LL+ M    C PN VTY  +++ L KL        V+  
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M E  F  N   +++L+ G  K G  +DA KL   M+ KG +PN V YSALIDGLC+  K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             EA+E+L EM  +G   +AFTYS+L+ G  ++ K  +A ++ + MA + C  + V YS 
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           +IH  C+ GKL EA+    +M  +   PDVV Y+++I GLC  G + EA  + ++M    
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQ-ES 296

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT---------------- 581
               PDV TY+ ++N LCK   +  +  LL+ M   GC+PD+VT                
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 356

Query: 582 CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
               L  +K    AP   T     L   L K ++     +++E M      P   T+  +
Sbjct: 357 AEYLLQGMKRAGCAPNVVT--YTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTM 414

Query: 642 VQELCRPKRIQAA 654
           V  LC   RI+ A
Sbjct: 415 VNGLCVSGRIKEA 427


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 158/520 (30%), Positives = 266/520 (51%), Gaps = 50/520 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++AI LF  MV       ++  FN +L+ I +   +   +     +   + + I  N  
Sbjct: 66  LDDAIGLFGGMVKSRPLP-SIFEFNKLLSAIAKMKKFDLVISLGEKM---QRLGISHNLY 121

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N++I   CR   +  A+ L  +M     EP I T  +L++G C   R+ +AV L+D+M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  +TF  LI+GL  + +   A  LVD M  +GC PN VTY  +++GLC +G++
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241

Query: 314 DKAVSLLDRMVASK-----------------------------------CMPNEVTYGTI 338
           D A +LL++M A+K                                     PN +TY ++
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+ L    R  D +R+L  M ERK + N   ++ LI    KEGK  +A KL+ +M+++  
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+   YS+LI+G C   + DEA+ +   MI+  C  N  TY++L+ GF ++ +  + VE
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++++M++   V N V Y+ LIHG  +      A+MV+ QM+S G  P+++ Y++++ GLC
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E+A+ +F  +     K +P ++TYNI++  +CK   +    DL  S+  +G  PD
Sbjct: 482 KNGKLEKAMVVFEYLQ--RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           ++  N  ++    K          L E A  LF++ R  G
Sbjct: 540 VIIYNTMISGFCRK---------GLKEEADALFRKMREDG 570



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/486 (30%), Positives = 242/486 (49%), Gaps = 41/486 (8%)

Query: 164 IIQEGLYHRALE----FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           I++ GL+   L+     +  +V ++    LP+   FN ++  + ++   D  I L  +M 
Sbjct: 56  ILRNGLHSMKLDDAIGLFGGMVKSRP---LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                 ++YTY  L++  C+ +++  A+ LL +M   G  P+ VT + L+NG C    + 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  LVD M   G  P+ +T+ TLIHGL L     +AV+L+DRMV   C PN VTYG ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           NGL K G       +L  ME  K   N  IYST+I  L K    +DA+ L+ +M  KG +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN + YS+LI  LC   +  +A  +L +MI      N  T+++L+  F + GK  +A ++
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           + +M K +   +   YS LI+G C   +L EA+ ++  M+S+ C P+VV Y+++I+G C 
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412

Query: 520 AGSVEEALKLFNEM---------------------------------LCLEPKSQPDVFT 546
           A  ++E ++LF EM                                   +     P++ T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN LL+ LCK   +  ++ +   +     +P + T NI +  +  K    +DG D    L
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC-KAGKVEDGWDLFCSL 531

Query: 607 AIRLFK 612
           +++  K
Sbjct: 532 SLKGVK 537



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 203/429 (47%), Gaps = 18/429 (4%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +LD+A+ L   M      P+   FN L++ + K  +      L + M   G   N  TYN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI+  C +  +  A++LL +M+     P+ VT  +++NG     R  D   ++  M E 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            +  +   ++TLI GLF   KA +A+ L  +M+++GC+PN V Y  +++GLC+ G  D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +L +M      AN   YS+++    +      A+ ++ +M       N + YS LI  
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC   +  +A  + + M+ R   P+VV ++++I      G + EA KL++EM  ++    
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM--IKRSID 362

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PD+FTY+ L+N  C    +  +  +   M+ + C P++VT N  +     K +   +G +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC-KAKRIDEGVE 421

Query: 602 FLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              E++ R                F+ +       + + M+   + P   T+  ++  LC
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481

Query: 647 RPKRIQAAI 655
           +  +++ A+
Sbjct: 482 KNGKLEKAM 490



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 142/267 (53%), Gaps = 4/267 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A RL   M+ E      V +FN++++  ++EG    A + Y+ ++     +I P+  T+
Sbjct: 313 DASRLLSDMI-ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR---SIDPDIFTY 368

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           + +I   C    +D A  +F  M  ++C P++ TY TL++G CK  R+DE V L  EM  
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G     VT+  LI+G  +  +   A  +   M   G  PN +TYNTL+ GLC  G L+K
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+ + + +  SK  P   TY  +I G+ K G+  DG  +  S+  +    +  IY+T+IS
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNT 402
           G  ++G  E+A  L+++M E G  P++
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDS 575



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 126/252 (50%), Gaps = 8/252 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF +LI  +   G     E +   M   KR +    F +  +   +     ++EA  +F 
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+ +  C   V ++N+++N   +       +E +  +       ++ NT+T+  +I   
Sbjct: 390 LMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFREM---SQRGLVGNTVTYTTLIHGF 445

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            +    DNA  +F++M      P+I TY TL+DGLCK  +L++A+++ + +Q     PT 
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+N++I G+CK G++     L  ++ LKG  P+ + YNT+I G C KG  ++A +L  +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565

Query: 323 MVASKCMPNEVT 334
           M     +P+  T
Sbjct: 566 MREDGPLPDSGT 577



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 141/309 (45%), Gaps = 18/309 (5%)

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R F      Y  ++       K +DA+ L+  M++    P+   ++ L+  + ++ K D 
Sbjct: 44  RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
              +  +M   G + N +TY+ L+  F    +   A+ +   M K     + V  S L++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C   ++ +A  +  QM+  G +PD + ++++IHGL       EA+ L + M  ++   
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM--VQRGC 221

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           QP++ TY +++N LCK+ +I  + +LLN M     + ++V  +  + +L  K     D  
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC-KYRHEDDAL 280

Query: 601 DFLNEL---AIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
           +   E+    +R            L   +R S   +++  M+++ ++P   T+  ++   
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340

Query: 646 CRPKRIQAA 654
            +  ++  A
Sbjct: 341 VKEGKLVEA 349



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 23/223 (10%)

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           ++ +  Y  +++    S K   A+ ++  M K+  + +   ++ L+  + +  K      
Sbjct: 47  SSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVIS 106

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  +M   G   ++  Y+ +I+  C    +  AL L  +M+ L    +P + T + LLN 
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL--GYEPSIVTLSSLLNG 164

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
            C    IS ++ L++ M++ G  PD +T    +  L                     F  
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL---------------------FLH 203

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            + S    +V+ M+Q+   P   T+  VV  LC+   I  A N
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  262 bits (670), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 256/512 (50%), Gaps = 34/512 (6%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + SFN ++           AL  +  I     + + P+ +TF  ++  +C    V  A+ 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITK---LGLHPDVVTFTTLLHGLCVEDRVSEALD 170

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
            F +M    C P++ T+ TLM+GLC+E R+ EAV LLD M  DG  PT +T+  +++G+C
Sbjct: 171 FFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230

Query: 274 KNGELGRAAKLVDNMF-LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           K G+   A  L+  M  +   +PN V Y+ +I  LC  G    A +L   M      P+ 
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            TY ++I G    GR  D  ++L  M ERK   +   Y+ LI+   KEGK  +A +L+ +
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDE 350

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +G  PNT+ Y+++IDG C+  + D AE++ + M   GC+ + FT+++L+ G+  + +
Sbjct: 351 MLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKR 410

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
               +E+  +M +   V N V Y+ LIHG C  G L  A  +  QM+S G  PD+V  ++
Sbjct: 411 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 470

Query: 513 MIHGLCNAGSVEEALKLFNEM----LCLEPKS-----QPDVFTYNILLNALCKQSNISHS 563
           ++ GLC+ G +++AL++F  M    + L+        +PDV TYNIL+  L  +     +
Sbjct: 471 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 530

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
            +L   M  RG  PD +T +  +           DG          L K+ R     ++ 
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMI-----------DG----------LCKQSRLDEATQMF 569

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             M  K  SP   T+  ++   C+  R+   +
Sbjct: 570 VSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 601



 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 153/510 (30%), Positives = 263/510 (51%), Gaps = 35/510 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ ++ ++    LP+ + F  ++  V R+   D  I L+++M  +    DIY++  
Sbjct: 63  AIDLFSDMLRSRP---LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  ++L  A+    ++   G  P  VTF  L++GLC    +  A      MF   
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN VT+ TL++GLC +G + +AV+LLDRM+     P ++TYGTI++G+ K G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 353 RVLMSMEERKFHV-NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +L  MEE    + N  IYS +I  L K+G+  DA  L+ +M EKG  P+   Y+++I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C  G+  +AE++L EM+    + +  TY++L+  F + GK  +A E++ +M     + N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 359

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + Y+ +I G C+  +L  A  ++  M ++GC PDV  ++++I G C A  +++ ++L +
Sbjct: 360 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 419

Query: 532 EMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA- 588
           EM    P+     +  TYN L++  C   +++ ++DL   M+  G  PD+VTCN  L   
Sbjct: 420 EM----PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 475

Query: 589 -----LKEKLEA---------------PQDGT--DFL--NELAIRLFKRQRTSGGFKIVE 624
                LK+ LE                P +G   D L  N L   L    +     ++ E
Sbjct: 476 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 535

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            M  + + P T T+  ++  LC+  R+  A
Sbjct: 536 EMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 160/507 (31%), Positives = 245/507 (48%), Gaps = 49/507 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG-------LYHRALE--------FYN 178
           V EA+  FH M  E  C+  V +F +++N + +EG       L  R +E         Y 
Sbjct: 165 VSEALDFFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 179 HIVNA------------------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
            IV+                   +  +I+PN + ++ +I ++C+ G   +A  LF EM  
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +   PD++TY +++ G C   R  +A  LL EM      P  VT+N LIN   K G+   
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           AA+L D M  +G +PN +TYN++I G C +  LD A  +   M    C P+  T+ T+I+
Sbjct: 344 AAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLID 403

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G     R  DG  +L  M  R    N   Y+TLI G    G    A+ L +QM+  G  P
Sbjct: 404 GYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 463

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMIN-----------NGCAANAFTYSSLMKGFFE 449
           + V  + L+DGLC  GK  +A E+   M             NG   +  TY+ L+ G   
Sbjct: 464 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLIN 523

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            GK  +A E++++M     V + + YS +I GLC+  +L EA  ++  M S+   P+VV 
Sbjct: 524 EGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVT 583

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           ++++I+G C AG V++ L+LF EM         D   Y  L+    K  NI+ ++D+   
Sbjct: 584 FNTLINGYCKAGRVDDGLELFCEMG--RRGIVADAIIYITLIYGFRKVGNINGALDIFQE 641

Query: 570 MMDRGCDPDLVTCNIFLTAL--KEKLE 594
           M+  G  PD +T    LT    KE+LE
Sbjct: 642 MISSGVYPDTITIRNMLTGFWSKEELE 668



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 49/495 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +L+      G       +L RM  +     + ++  I     K      A+ L   M
Sbjct: 186 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKM 245

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +  H    V  ++++++ + ++G +  A   +  +   +   I P+  T+N +I   C 
Sbjct: 246 EEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEM---QEKGIFPDLFTYNSMIVGFCS 302

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G   +A QL +EM  R   PD+ TY  L++   KE +  EA  L DEM   G  P  +T
Sbjct: 303 SGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTIT 362

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLP----------------------------- 295
           +N +I+G CK   L  A  +   M  KGC P                             
Sbjct: 363 YNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMP 422

Query: 296 ------NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
                 N VTYNTLIHG CL G+L+ A+ L  +M++S   P+ VT  T+++GL   G+  
Sbjct: 423 RRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 482

Query: 350 DGARVLMSMEERKFHVNE-----------YIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           D   +  +M++ K  ++              Y+ LI GL  EGK  +A +L+++M  +G 
Sbjct: 483 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 542

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+T+ YS++IDGLC+  + DEA ++   M +   + N  T+++L+ G+ ++G+    +E
Sbjct: 543 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 602

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++ +M +   V + + Y  LI+G  + G +  A  ++ +M+S G  PD +   +M+ G  
Sbjct: 603 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 662

Query: 519 NAGSVEEALKLFNEM 533
           +   +E A+ +  ++
Sbjct: 663 SKEELERAVAMLEDL 677



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 201/451 (44%), Gaps = 61/451 (13%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +++AI LF +M      P +  +C LM  + +  R D  + L  +M+         +FN+
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI   C   +L  A      +   G  P+ VT+ TL+HGLC++  + +A+    +M  + 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C PN VT+ T++N                                   GL +EG+  +A+
Sbjct: 180 CRPNVVTFTTLMN-----------------------------------GLCREGRIVEAV 204

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYSSLMKG 446
            L  +MME G +P  + Y  ++DG+C+ G    A  +L +M   +    N   YS+++  
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             + G+   A  ++ +M +     +   Y+ +I G C  G+  +A  +  +ML R   PD
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSID 565
           VV Y+++I+     G   EA +L++EML   P+   P+  TYN +++  CKQ  +  + D
Sbjct: 325 VVTYNALINAFVKEGKFFEAAELYDEML---PRGIIPNTITYNSMIDGFCKQDRLDAAED 381

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
           +   M  +GC PD+ T   F T +     A                  +R   G +++  
Sbjct: 382 MFYLMATKGCSPDVFT---FTTLIDGYCGA------------------KRIDDGMELLHE 420

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           M ++ L   T T+  ++   C    + AA++
Sbjct: 421 MPRRGLVANTVTYNTLIHGFCLVGDLNAALD 451



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 52/332 (15%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L SG  +    EDA+ L+  M+     P+ V +  L+  + R+ +PD    +  +M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              + ++++ L+K F    K   A+  +  + K     + V ++ L+HGLC + ++ EA 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKS---------- 540
             + QM    C+P+VV ++++++GLC  G + EA+ L + M+   L+P            
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 541 ----------------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
                                  P+V  Y+ ++++LCK    S + +L   M ++G  PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 579 LVTCNIFLTA-------------LKEKLE---APQDGTDFLNELAIRLFKRQRTSGGFKI 622
           L T N  +               L+E LE   +P   T   N L     K  +     ++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT--YNALINAFVKEGKFFEAAEL 347

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            + ML + + P T T+  ++   C+  R+ AA
Sbjct: 348 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 379



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 9/208 (4%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           K  + +FKA  K+ +  +A   F+ +      +  V ++N ++  +I EG +  A E Y 
Sbjct: 482 KDALEMFKAMQKSKMDLDASHPFNGV------EPDVLTYNILICGLINEGKFLEAEELYE 535

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +    H  I+P+T+T++ +I  +C+   +D A Q+F  M  ++  P++ T+ TL++G C
Sbjct: 536 EM---PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 592

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K  R+D+ + L  EM   G     + +  LI G  K G +  A  +   M   G  P+ +
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 652

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           T   ++ G   K  L++AV++L+ +  S
Sbjct: 653 TIRNMLTGFWSKEELERAVAMLEDLQMS 680



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 23/214 (10%)

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L  GF E      A++++ DM ++  + + V +  L+  +    +      ++ +M  + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            + D+ +++ +I   C+   +  AL  F ++  L     PDV T+  LL+ LC +  +S 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFTTLLHGLCVEDRVSE 167

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           ++D  + M +  C P++VT    +  L                      +  R      +
Sbjct: 168 ALDFFHQMFETTCRPNVVTFTTLMNGL---------------------CREGRIVEAVAL 206

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           ++ M++  L P   T+  +V  +C+     +A+N
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 178/603 (29%), Positives = 299/603 (49%), Gaps = 41/603 (6%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +FN    +G  Q   +T   LI  +   G       +L  M     ++   ++  + K  
Sbjct: 222 LFNEMLDVG-IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGL 280

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN- 187
              H + EA +LF +M  +  C+    ++ +++  + Q G  + AL  +  ++N      
Sbjct: 281 CMKHRISEATQLFMSM-KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYG 339

Query: 188 ---ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              I P+  T +++I  +C+ G V  A +L   M  R C  DI TY TL+ GLC E+R+ 
Sbjct: 340 IKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRIS 399

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM------FLKGCLPNEV 298
           EA  L   MQ  GC P  +T+  L+ GLC+ G +  A +L   M      +   C P  +
Sbjct: 400 EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLI 459

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           +Y+ +I GLC     D+A  L + M A   MP+ ++Y T+I+G    G+      +   M
Sbjct: 460 SYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 519

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +     +    S LI  L K+GK  +A KL + ++++GC  + V  + L+ GLC   + 
Sbjct: 520 LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRI 579

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN------NCVYNE 472
            +A ++  +M   GC  N  T ++LMKG  +SG    A+E+ K+M  +      NC  N 
Sbjct: 580 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNA 639

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           + YS++I GLC+ G+  EAR ++ +M + G  PDV++Y+S+IHG C +G  ++A  LFNE
Sbjct: 640 ISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 699

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M+  +   QPDV T+++L++ LCK+  +  + +LL  M+ RGC P+ VT    +  L   
Sbjct: 700 MV--DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCM- 756

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                   D ++E A +LF + +  G              P   T+  +++ LC+   I+
Sbjct: 757 -------NDRISE-ATQLFMKMQKLGCL------------PDVVTYGTLMKGLCQTGNIK 796

Query: 653 AAI 655
            A+
Sbjct: 797 TAL 799



 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/486 (31%), Positives = 265/486 (54%), Gaps = 19/486 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + K     H + EA  LF +M  +  C+    ++ +++  + Q G  + AL+ +  
Sbjct: 91  TYSTLIKGLCMEHRISEATWLFMSM-QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQE 149

Query: 180 IVNAKH---MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           ++N      +   P  ++++++I  +C+    D A +LF+EM  +   PD+ +Y +L+ G
Sbjct: 150 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHG 209

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C   + ++A  L +EM   G  P   T  VLI+  CK G++  A +L++ M  +GC+ +
Sbjct: 210 FCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILD 269

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VTY+TLI GLC+K  + +A  L   M    C P+ + YGT++ GL + G+      +  
Sbjct: 270 IVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQ 329

Query: 357 SM--EERKFHV-----NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
            M  +  ++ +     +    S LI  L KEGK  +A +L + M+++GC  + V YS LI
Sbjct: 330 EMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLI 389

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   +  EA  +   M   GC  +A TY +LMKG  ++G  + A+++ ++M  +   
Sbjct: 390 KGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGR 449

Query: 470 YNEVC------YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
           Y   C      YS++I GLC+D +  EAR ++ +M ++G  PDV++Y+++IHG C +G  
Sbjct: 450 YGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKW 509

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           E+A  LFNEM  L+   QPDV T ++L++ LCK+  +  +  LL  ++ RGC  D+VTC 
Sbjct: 510 EKAKCLFNEM--LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCT 567

Query: 584 IFLTAL 589
             +  L
Sbjct: 568 TLVKGL 573



 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 168/599 (28%), Positives = 302/599 (50%), Gaps = 25/599 (4%)

Query: 6   LPHTKILLTITNSAMKMKTLSLTTIPSERSHRFFSVR------SAVSSNKQMETEPQ-GN 58
           + H   +L I   +  +K L +    SE +  F S++       A++    M+   Q G 
Sbjct: 261 MVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGK 320

Query: 59  AKSEQPFSDEIFNSTPKLG--SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVV 116
                    E+ N T + G    +   +T   LI      G       +L  M +   ++
Sbjct: 321 INIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCIL 380

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
              ++  + K     H + EA  LF +M  +  C+    ++ +++  + Q G  + AL+ 
Sbjct: 381 DIVTYSTLIKGLCMEHRISEATWLFMSM-QKLGCRPDAITYGTLMKGLCQTGNINIALQL 439

Query: 177 YNHIVNAKH---MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
           +  ++N      +   P  ++++++I  +C+    D A +LF EM  +   PD+ +Y TL
Sbjct: 440 HQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTL 499

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           + G C   + ++A  L +EM   G  P   T +VLI+ LCK G++  A KL++ +  +GC
Sbjct: 500 IHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGC 559

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR---AVD 350
           + + VT  TL+ GLC+K  + KA  L  +M    CMPN VT  T++ GL + G    A++
Sbjct: 560 ILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALE 619

Query: 351 GARVLMSMEERKFHVN----EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
             + ++S +   + +N       YS +I GL K G+ ++A +L+K+M   G  P+ + Y+
Sbjct: 620 LHKNMLS-DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYT 678

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           +LI G CR GK  +A+ +  EM++ G   +  T+S L+    + GK  +A E+ + M + 
Sbjct: 679 SLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQR 738

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
            C+ N V Y+ L+ GLC + ++ EA  ++ +M   GC PDVV Y +++ GLC  G+++ A
Sbjct: 739 GCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTA 798

Query: 527 LKLFNEMLCLEPKS----QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           L+L  +ML    +     +PDV +Y+I+++ LCK      + +L   M   G  P++++
Sbjct: 799 LELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVIS 857



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 175/592 (29%), Positives = 285/592 (48%), Gaps = 52/592 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           ++ SLI  + +SG ++  + +   M     +  V      I +F   GK   V EA  L 
Sbjct: 202 SYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGK---VIEANELL 258

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             MV    C   + ++++++  +  +   HR  E     ++ K +   P+ + +  ++K 
Sbjct: 259 EVMVHR-GCILDIVTYSTLIKGLCMK---HRISEATQLFMSMKKLGCRPDAIAYGTLMKG 314

Query: 202 VCRLGLVDNAIQLFREM-------PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +C+ G ++ A+ L +EM        ++   PD+ T   L+D LCKE ++ EA  LL+ M 
Sbjct: 315 LCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMI 374

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             GC    VT++ LI GLC    +  A  L  +M   GC P+ +TY TL+ GLC  GN++
Sbjct: 375 QRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNIN 434

Query: 315 KAVSLLDRMV------ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            A+ L   M+        KC P  ++Y  II+GL K  R  +   +   M+ +    +  
Sbjct: 435 IALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVI 494

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+TLI G    GK E A  L+ +M++ G +P+    S LID LC+ GK  EA ++L  +
Sbjct: 495 SYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVV 554

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I  GC  +  T ++L+KG     +  KA +++  M K  C+ N V  + L+ GLC+ G +
Sbjct: 555 IQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNI 614

Query: 489 REARMVWTQMLSR------GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           + A  +   MLS        CKP+ ++YS +I GLC  G  +EA +LF EM  L     P
Sbjct: 615 KIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKAL--GVIP 672

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           DV +Y  L++  C+      +  L N M+D G  PD+ T ++ +  L             
Sbjct: 673 DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML------------- 719

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    K  +     +++EVM+Q+   P T T+  +V+ LC   RI  A
Sbjct: 720 --------CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/457 (31%), Positives = 245/457 (53%), Gaps = 18/457 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  I     K    +EA  LF  M  +      V S+ ++++     G + +A   +N 
Sbjct: 460 SYSIIIDGLCKDRREDEARELFEEMKAQ-GIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 518

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++   + I P+  T +++I  +C+ G V  A +L   +  R C  D+ T  TL+ GLC 
Sbjct: 519 MLD---VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCM 575

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK------GC 293
           ++R+ +A  L  +MQ  GC P  VT   L+ GLC++G +  A +L  NM          C
Sbjct: 576 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            PN ++Y+ +I GLC  G  D+A  L   M A   +P+ ++Y ++I+G  + G+  D   
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   M +     +   +S LI  L KEGK  +A +L + M+++GC PNTV Y+ L+ GLC
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 755

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY--- 470
              +  EA ++  +M   GC  +  TY +LMKG  ++G    A+E+ K M  +   Y   
Sbjct: 756 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 815

Query: 471 ---NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              + + YS++I GLC+ G+  EAR ++ +M + G  P+V++Y+S+IHG C +G +E+A 
Sbjct: 816 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 875

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            LFNEM  ++   Q +  TY+++++  CK+  I  ++
Sbjct: 876 HLFNEM--VDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 168/574 (29%), Positives = 275/574 (47%), Gaps = 57/574 (9%)

Query: 103 EMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN 162
           ++V Y +R +  V      I I    GK   V EA  L   M+    C   + ++++++ 
Sbjct: 44  DIVTYSIRPD--VTTSSMLIDILCKEGK---VIEANELLEVMIQR-GCILDIVTYSTLIK 97

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
            +  E   HR  E     ++ + +   P+ +T+  ++K +C+ G ++ A+QL +EM    
Sbjct: 98  GLCME---HRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDT 154

Query: 223 ------CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
                 C+P + +Y  ++DGLCK+ R DEA  L  EM+  G  P  +++  LI+G C +G
Sbjct: 155 GRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSG 214

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +  +A  L + M   G  P+  T   LI   C +G + +A  LL+ MV   C+ + VTY 
Sbjct: 215 KWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYS 274

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME- 395
           T+I GL    R  +  ++ MSM++     +   Y TL+ GL + GK   A+ L ++M+  
Sbjct: 275 TLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLND 334

Query: 396 ------KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
                 K  +P+    S LID LC+ GK  EA E+L  MI  GC  +  TYS+L+KG   
Sbjct: 335 TSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 394

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG------C 503
             +  +A  ++  M K  C  + + Y  L+ GLC+ G +  A  +  +ML+        C
Sbjct: 395 EHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKC 454

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSNI 560
           KP +++YS +I GLC     +EA +LF EM     K+Q   PDV +Y  L++  C     
Sbjct: 455 KPTLISYSIIIDGLCKDRREDEARELFEEM-----KAQGIMPDVISYTTLIHGFCLSGKW 509

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  L N M+D G  PD+ T ++ +                       L K+ +     
Sbjct: 510 EKAKCLFNEMLDVGIQPDVTTSSVLIDM---------------------LCKKGKVIEAN 548

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           K++EV++Q+       T   +V+ LC   RI  A
Sbjct: 549 KLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 137/425 (32%), Positives = 211/425 (49%), Gaps = 24/425 (5%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT---------LMDGL 237
            + P++ TFN++I  +C +  V+  +     +  R   PDI TY           L+D L
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CKE ++ EA  LL+ M   GC    VT++ LI GLC    +  A  L  +M   GC P+ 
Sbjct: 65  CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMV------ASKCMPNEVTYGTIINGLVKLGRAVDG 351
           +TY TL+ GLC  GN++ A+ L   M+        KC P  ++Y  II+GL K  R  + 
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +   M+ +    +   Y++LI G    GK E A  L+ +M++ G +P+      LID 
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDM 244

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C+ GK  EA E+L  M++ GC  +  TYS+L+KG     +  +A +++  M K  C  +
Sbjct: 245 FCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPD 304

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLS-------RGCKPDVVAYSSMIHGLCNAGSVE 524
            + Y  L+ GLC+ GK+  A  +  +ML+       +  +PDV   S +I  LC  G V 
Sbjct: 305 AIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVI 364

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA +L   M  ++     D+ TY+ L+  LC +  IS +  L  SM   GC PD +T   
Sbjct: 365 EANELLEVM--IQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGT 422

Query: 585 FLTAL 589
            +  L
Sbjct: 423 LMKGL 427



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 189/394 (47%), Gaps = 59/394 (14%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT---------L 303
           M++ G FP   TFN+LIN LC    +      +  +  +G +P+ VTY+          L
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  LC +G + +A  LL+ M+   C+ + VTY T+I GL    R  +   + MSM++   
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG------CKPNTVVYSALIDGLCRVGK 417
             +   Y TL+ GL + G    A++L ++M+         CKP  + YS +IDGLC+  +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV-------------------- 457
            DEA E+  EM   G   +  +Y+SL+ GF  SGK  KA                     
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 458 ---------------EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
                          E+ + M    C+ + V YS LI GLC   ++ EA  ++  M   G
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-------PDVFTYNILLNALC 555
           C+PD +AY +++ GLC  G +  AL L  EM  L   SQ       PDV T ++L++ LC
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEM--LNDTSQYGIKCIRPDVTTSSMLIDILC 358

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           K+  +  + +LL  M+ RGC  D+VT +  +  L
Sbjct: 359 KEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 392


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 270/512 (52%), Gaps = 51/512 (9%)

Query: 134  VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
            +++A+ LF  MV        ++ F+ +L+ I +   +   +     + N   + I  N  
Sbjct: 676  LDDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQN---LGIPHNHY 731

Query: 194  TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            T++++I   CR   +  A+ +  +M     EP+I T  +L++G C   R+ EAV L+D+M
Sbjct: 732  TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 791

Query: 254  QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             V G  P  VTFN LI+GL  + +   A  L+D M  KGC P+ VTY  +++GLC +G+ 
Sbjct: 792  FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 851

Query: 314  DKAVSLLDRMVASKCMPNEVTYGTIINGLVKL---------------------------- 345
            D A +LL++M   K  P  + Y TII+GL K                             
Sbjct: 852  DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 911

Query: 346  -------GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
                   GR  D +R+L  M ERK + + + +S LI    KEGK  +A KL+ +M+++  
Sbjct: 912  ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 971

Query: 399  KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
             P+ V YS+LI+G C   + DEA+++   M++  C  +  TY++L+KGF +  +  + +E
Sbjct: 972  DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 1031

Query: 459  IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
            ++++M++   V N V Y++LI GL + G    A+ ++ +M+S G  P+++ Y++++ GLC
Sbjct: 1032 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 1091

Query: 519  NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
              G +E+A+ +F  +     K +P ++TYNI++  +CK   +    DL  ++  +G  PD
Sbjct: 1092 KNGKLEKAMVVFEYLQ--RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 1149

Query: 579  LVTCNIFLTAL-----KEKLEA-----PQDGT 600
            +V  N  ++       KE+ +A      +DGT
Sbjct: 1150 VVAYNTMISGFCRKGSKEEADALFKEMKEDGT 1181



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 252/480 (52%), Gaps = 26/480 (5%)

Query: 173  ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
            A+  +  +V ++     P+ + F+ ++  + ++   D  I L  +M       + YTY  
Sbjct: 679  AVALFGEMVKSRP---FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735

Query: 233  LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
            L++  C+ ++L  A+ +L +M   G  P  VT + L+NG C +  +  A  LVD MF+ G
Sbjct: 736  LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 293  CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              PN VT+NTLIHGL L     +A++L+DRMVA  C P+ VTYG ++NGL K G      
Sbjct: 796  YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 353  RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
             +L  ME+ K      IY+T+I GL K    +DA+ L+K+M  KG +PN V YS+LI  L
Sbjct: 856  NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915

Query: 413  CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            C  G+  +A  +L +MI      + FT+S+L+  F + GK  +A +++ +M K +   + 
Sbjct: 916  CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975

Query: 473  VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
            V YS LI+G C   +L EA+ ++  M+S+ C PDVV Y+++I G C    VEE +++F E
Sbjct: 976  VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 1035

Query: 533  MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            M   +     +  TYNIL+  L +  +   + ++   M+  G  P+++T N  L      
Sbjct: 1036 M--SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL------ 1087

Query: 593  LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                 DG          L K  +      + E + +  + P   T+  +++ +C+  +++
Sbjct: 1088 -----DG----------LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 1132



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 243/468 (51%), Gaps = 6/468 (1%)

Query: 124  IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
            +   Y  +  + EA+ L   M    +   TV +FN++++ +    L+++A E    I   
Sbjct: 771  LLNGYCHSKRISEAVALVDQMFVTGYQPNTV-TFNTLIHGLF---LHNKASEAMALIDRM 826

Query: 184  KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                  P+ +T+ +V+  +C+ G  D A  L  +M     EP +  Y T++DGLCK   +
Sbjct: 827  VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 886

Query: 244  DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            D+A+ L  EM+  G  P  VT++ LI+ LC  G    A++L+ +M  +   P+  T++ L
Sbjct: 887  DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 946

Query: 304  IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
            I     +G L +A  L D MV     P+ VTY ++ING     R  +  ++   M  +  
Sbjct: 947  IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 1006

Query: 364  HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
              +   Y+TLI G  K  + E+ M+++++M ++G   NTV Y+ LI GL + G  D A+E
Sbjct: 1007 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 1066

Query: 424  ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
            I  EM+++G   N  TY++L+ G  ++GK  KA+ +++ + ++        Y+++I G+C
Sbjct: 1067 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 1126

Query: 484  EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
            + GK+ +   ++  +  +G KPDVVAY++MI G C  GS EEA  LF EM   E  + P+
Sbjct: 1127 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM--KEDGTLPN 1184

Query: 544  VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
               YN L+ A  +  +   S +L+  M   G   D  T  +    L +
Sbjct: 1185 SGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 1232



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 221/417 (52%), Gaps = 5/417 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ +V ++     P+ + FN ++  + +L   D  I L ++M V     D+YT+  
Sbjct: 172 AIDLFSDMVKSRP---FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++  C   ++  A+ +L +M   G  P  VT   L+NG C+   +  A  LVD M   G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ V YN +I  LC    ++ A      +      PN VTY  ++NGL    R  D A
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R+L  M ++K   N   YS L+    K GK  +A +L+++M+     P+ V YS+LI+GL
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   + DEA ++   M++ GC A+  +Y++L+ GF ++ +    ++++++M++   V N 
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 468

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LI G  + G + +A+  ++QM   G  PD+  Y+ ++ GLC+ G +E+AL +F +
Sbjct: 469 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 528

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           M   + +   D+ TY  ++  +CK   +  +  L  S+  +G  PD+VT    ++ L
Sbjct: 529 M--QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 207/391 (52%), Gaps = 10/391 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T   ++   CR   V +A+ L  +M     +PDI  Y  ++D LCK  R+++A   
Sbjct: 256 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 315

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             E++  G  P  VT+  L+NGLC +     AA+L+ +M  K   PN +TY+ L+     
Sbjct: 316 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 375

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G + +A  L + MV     P+ VTY ++INGL    R  +  ++   M  +    +   
Sbjct: 376 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 435

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  K  + ED MKL+++M ++G   NTV Y+ LI G  + G  D+A+E   +M 
Sbjct: 436 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G + + +TY+ L+ G  ++G+  KA+ I++DM K     + V Y+ +I G+C+ GK+ 
Sbjct: 496 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 555

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  ++  +  +G KPD+V Y++M+ GLC  G + E   L+ +M       Q  +   + 
Sbjct: 556 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM------KQEGLMKNDC 609

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            L+      +I+ S +L+  M+  G  P L+
Sbjct: 610 TLS----DGDITLSAELIKKMLSCGYAPSLL 636



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 261/570 (45%), Gaps = 49/570 (8%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  +  K   V +A   F   ++    +  V ++ +++N +     +  A    + ++  
Sbjct: 299 IIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 357

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I PN +T++ ++    + G V  A +LF EM   + +PDI TY +L++GLC  +R+
Sbjct: 358 K---ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 414

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEA  + D M   GC    V++N LING CK   +    KL   M  +G + N VTYNTL
Sbjct: 415 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 474

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G    G++DKA     +M      P+  TY  ++ GL   G       +   M++R+ 
Sbjct: 475 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 534

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            ++   Y+T+I G+ K GK E+A  L+  +  KG KP+ V Y+ ++ GLC  G   E E 
Sbjct: 535 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 594

Query: 424 ILFEMINNGCAANAFTYS---------------------SLMKGFFESGKGHKAVEIWKD 462
           +  +M   G   N  T S                     SL+K   +SG   KA+ + + 
Sbjct: 595 LYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKD-IKSGVCKKALSLLRA 653

Query: 463 MA-KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            + K +  Y E    +  +GL E  KL +A  ++ +M+     P ++ +S ++  +    
Sbjct: 654 FSGKTSYDYRE---KLSRNGLSE-LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMN 709

Query: 522 SVEEALKLFNEMLCLE-PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
             +  + L  +M  L  P +    +TY+IL+N  C++S +  ++ +L  MM  G +P++V
Sbjct: 710 KFDVVISLGEQMQNLGIPHNH---YTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIV 766

Query: 581 TCNIFL------------TALKEKL--EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           T +  L             AL +++     Q  T   N L   LF   + S    +++ M
Sbjct: 767 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 826

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           + K   P   T+  VV  LC+      A N
Sbjct: 827 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 856



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 193/382 (50%), Gaps = 2/382 (0%)

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           KT  R   +++AI LF +M      P I  +  L+  + K  + D  + L  +M+V G  
Sbjct: 161 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 220

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
               TFN++IN  C   ++  A  ++  M   G  P+ VT  +L++G C +  +  AVSL
Sbjct: 221 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 280

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           +D+MV     P+ V Y  II+ L K  R  D       +E +    N   Y+ L++GL  
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 340

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             +  DA +L   M++K   PN + YSAL+D   + GK  EA+E+  EM+      +  T
Sbjct: 341 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YSSL+ G     +  +A +++  M    C+ + V Y+ LI+G C+  ++ +   ++ +M 
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            RG   + V Y+++I G   AG V++A + F++M        PD++TYNILL  LC    
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFF--GISPDIWTYNILLGGLCDNGE 518

Query: 560 ISHSIDLLNSMMDRGCDPDLVT 581
           +  ++ +   M  R  D D+VT
Sbjct: 519 LEKALVIFEDMQKREMDLDIVT 540



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 139/573 (24%), Positives = 254/573 (44%), Gaps = 79/573 (13%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A RL   M+ +      V +++++L+  ++ G    A E +  +V    M+I P+ +T+
Sbjct: 346 DAARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMV---RMSIDPDIVTY 401

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           + +I  +C    +D A Q+F  M  + C  D+ +Y TL++G CK  R+++ + L  EM  
Sbjct: 402 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 461

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G     VT+N LI G  + G++ +A +    M   G  P+  TYN L+ GLC  G L+K
Sbjct: 462 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 521

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+ + + M   +   + VTY T+I G+ K G+  +   +  S+  +    +   Y+T++S
Sbjct: 522 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMS 581

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA-------------------------LID 410
           GL  +G   +   L+ +M ++G   N    S                          +  
Sbjct: 582 GLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKS 641

Query: 411 GLCRVG---------------------------KPDEAEEILFEMINNGCAANAFTYSSL 443
           G+C+                             K D+A  +  EM+ +    +   +S L
Sbjct: 642 GVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKL 701

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +    +  K    + + + M      +N   YS+LI+  C   +L  A  V  +M+  G 
Sbjct: 702 LSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGY 761

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +P++V  SS+++G C++  + EA+ L ++M       QP+  T+N L++ L   +  S +
Sbjct: 762 EPNIVTLSSLLNGYCHSKRISEAVALVDQMFV--TGYQPNTVTFNTLIHGLFLHNKASEA 819

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
           + L++ M+ +GC PDLVT  + +  L                      KR  T   F ++
Sbjct: 820 MALIDRMVAKGCQPDLVTYGVVVNGL---------------------CKRGDTDLAFNLL 858

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             M Q  L P    +  ++  LC+ K +  A+N
Sbjct: 859 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 891



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 214/422 (50%), Gaps = 27/422 (6%)

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           ++ +L++A+ L  +M     FP+ V FN L++ + K  +      L   M + G   +  
Sbjct: 165 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 224

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T+N +I+  C    +  A+S+L +M+     P+ VT G+++NG  +  R  D   ++  M
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E  +  +   Y+ +I  L K  +  DA   +K++  KG +PN V Y+AL++GLC   + 
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            +A  +L +MI      N  TYS+L+  F ++GK  +A E++++M + +   + V YS L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I+GLC   ++ EA  ++  M+S+GC  DVV+Y+++I+G C A  VE+ +KLF EM   + 
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM--SQR 462

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
               +  TYN L+    +  ++  + +  + M   G  PD+ T NI L  L +  E    
Sbjct: 463 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL--- 519

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
                 E A+ +F            E M ++ +     T+  V++ +C+  +++ A    
Sbjct: 520 ------EKALVIF------------EDMQKREMDLDIVTYTTVIRGMCKTGKVEEA---- 557

Query: 659 WS 660
           WS
Sbjct: 558 WS 559



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 159/663 (23%), Positives = 296/663 (44%), Gaps = 63/663 (9%)

Query: 37   RFFSVRSAVSSNKQMETEPQG------NAKSEQPFSD-EIFNSTPKLGSYQLGDSTFYSL 89
            R  S R  VS+     T  QG        K+++ FS  + F  +P + +Y +       L
Sbjct: 457  REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI-------L 509

Query: 90   IQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFH 149
            +    ++G+ +   ++   M++ +  +   ++  + +   K   VEEA  LF ++  +  
Sbjct: 510  LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK-G 568

Query: 150  CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN---------TLTFNLVIK 200
             K  + ++ ++++ +  +GL H     Y  +   K   ++ N         TL+  L+ K
Sbjct: 569  LKPDIVTYTTMMSGLCTKGLLHEVEALYTKM---KQEGLMKNDCTLSDGDITLSAELIKK 625

Query: 201  TVC-----------RLGLVDNAIQLFREMPVRNCEPDIYTYCTLM--DGLCKENRLDEAV 247
             +            + G+   A+ L R    +      Y Y   +  +GL  E +LD+AV
Sbjct: 626  MLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTS----YDYREKLSRNGL-SELKLDDAV 680

Query: 248  LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
             L  EM     FP+ + F+ L++ + K  +      L + M   G   N  TY+ LI+  
Sbjct: 681  ALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCF 740

Query: 308  CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
            C +  L  A+++L +M+     PN VT  +++NG     R  +   ++  M    +  N 
Sbjct: 741  CRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 800

Query: 368  YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
              ++TLI GLF   KA +AM L  +M+ KGC+P+ V Y  +++GLC+ G  D A  +L +
Sbjct: 801  VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 860

Query: 428  MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
            M           Y++++ G  +      A+ ++K+M       N V YS LI  LC  G+
Sbjct: 861  MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 920

Query: 488  LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
              +A  + + M+ R   PDV  +S++I      G + EA KL++EM  ++    P + TY
Sbjct: 921  WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTY 978

Query: 548  NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
            + L+N  C    +  +  +   M+ + C PD+VT N  +     K +  ++G +   E++
Sbjct: 979  SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC-KYKRVEEGMEVFREMS 1037

Query: 608  IR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
             R               LF+        +I + M+   + P   T+  ++  LC+  +++
Sbjct: 1038 QRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 1097

Query: 653  AAI 655
             A+
Sbjct: 1098 KAM 1100


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 156/518 (30%), Positives = 266/518 (51%), Gaps = 54/518 (10%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN + +  VI   C+ G VD A +L  EM  R  + D+  + TL+ GLC++ R+DEA+ 
Sbjct: 108 FPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALE 167

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-----GCLPNEVTYNTL 303
               M  + C P  +T+N ++NGLCK   +  A +L D+M  +     GC P+ ++Y+T+
Sbjct: 168 QFKSMG-EECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTV 226

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  LC    +DKA     RM A  C PN VTY ++I+GL K+ R  +   +L+ M+E+ F
Sbjct: 227 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGF 286

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            +N   ++ ++  L+K  + E A + ++++++ G KPN V Y+  + GLC+ G+ DEA  
Sbjct: 287 GINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYR 346

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           IL EM+ +    +  TYSS++ GF ++G+  KA +++  M  + C+ + V +  L+HG  
Sbjct: 347 ILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFS 406

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           E  K REA  V   M++ G  P +  Y+ ++  +C A SVE AL+++++M     K QPD
Sbjct: 407 EHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKM--KRKKRQPD 464

Query: 544 VFTY-----------------------------------NILLNALCKQSNISHSIDLLN 568
             TY                                   + L+  LCKQ  +  +  +L+
Sbjct: 465 CNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLD 524

Query: 569 SMMDRGCDPDLVTCNIFLTA--LKEKLEAPQD---GTDFLNELAI------RLFKRQRTS 617
           ++++ GC P   T  I +    L++K EA         F+ + A        + K  +  
Sbjct: 525 NVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPD 584

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              +++E M+ K + P   T+  V++ LC   R+++AI
Sbjct: 585 EAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAI 622



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 223/433 (51%), Gaps = 31/433 (7%)

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
           YT   L++   K  R +EA  LL E     CFP  + +  +ING CK G++ +A +L+D 
Sbjct: 77  YTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDE 136

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  +G   + + ++TLI GLC KG +D+A+     M   +C PN +TY T++NGL K  R
Sbjct: 137 MKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNGLCKANR 195

Query: 348 AVDGARVLMSMEERKFHVNE------YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
            +D A  L    E+++  +         YST+I  L K  + + A + +K+M   GC PN
Sbjct: 196 -IDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPN 254

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V YS+LIDGLC+V +P E  E+L  M   G   N   +++++   +++ +  KA + ++
Sbjct: 255 VVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFE 314

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            + K+    N V Y+V +HGLC+ G++ EA  +  +M+     PDV+ YSS+I G C AG
Sbjct: 315 RLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 374

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            +++A  +F  M+  E    P   T+  LL+   +      +  +   M++ G  P L T
Sbjct: 375 RMDKADDVFTRMMVHECIPHP--VTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQT 432

Query: 582 CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
            N+ +  +         G D + E A+ ++ +            M +K   P  +T+  +
Sbjct: 433 YNVLMDCVC--------GADSV-ESALEIYHK------------MKRKKRQPDCNTYAPL 471

Query: 642 VQELCRPKRIQAA 654
           +Q LCR +R+  A
Sbjct: 472 IQCLCRARRVDEA 484



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 146/539 (27%), Positives = 242/539 (44%), Gaps = 61/539 (11%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI---VNAKHMNILP 190
           ++EA+  F +M +E  C   V ++N+V+N + +      ALE ++ +     A H    P
Sbjct: 162 IDEALEQFKSMGEE--CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASH-GCEP 218

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + ++++ VI  +C+   VD A + F+ M    C P++ TY +L+DGLCK +R  E + LL
Sbjct: 219 DVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELL 278

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             M+  G     + FN +++ L KN E  +A +  + +   G  PN VTYN  +HGLC  
Sbjct: 279 LHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKA 338

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D+A  +L  MV SK  P+ +TY +II+G  K GR      V   M   +   +   +
Sbjct: 339 GRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 398

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
            TL+ G  +  K+ +A ++ + M+  G  P    Y+ L+D +C     + A EI  +M  
Sbjct: 399 MTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKR 458

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
                +  TY+ L++    + +  +A E    M  +N V N      L+  LC+ G++ E
Sbjct: 459 KKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDE 518

Query: 491 ARMVWTQMLSRGCKP--------------------------------DVVAYSSMIHGLC 518
           A  V   ++  GC+P                                D   YS  +  +C
Sbjct: 519 ACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEIC 578

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
            AG  +EA+++  +M+      +PD  TY  +L +LC    +  +I     M  RGC P 
Sbjct: 579 KAGKPDEAVEVIEQMVL--KGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPG 636

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           LVT  + +              D  +E              F+I E M+    +PQ  T
Sbjct: 637 LVTYTLLI--------GEACSADMADE-------------AFRIFEAMVAAGFTPQAQT 674



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 183/398 (45%), Gaps = 35/398 (8%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
            FN++L+ + +     +A +F+  ++ +      PN +T+N+ +  +C+ G VD A ++ 
Sbjct: 292 DFNAMLHALWKNDEQEKACQFFERLLKSGKK---PNVVTYNVAVHGLCKAGRVDEAYRIL 348

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM      PD+ TY +++DG CK  R+D+A  +   M V  C P PVTF  L++G  ++
Sbjct: 349 LEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEH 408

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            +   A ++ ++M   G +P   TYN L+  +C   +++ A+ +  +M   K  P+  TY
Sbjct: 409 KKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTY 468

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +I  L +  R  +    L  ME      N  I   L+  L K+G+ ++A  +   ++E
Sbjct: 469 APLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 528

Query: 396 KGCKP--------------------------------NTVVYSALIDGLCRVGKPDEAEE 423
            GC+P                                +   YS  +  +C+ GKPDEA E
Sbjct: 529 VGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVE 588

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++ +M+  G   +  TY ++++      +   A+  ++ MA   C    V Y++LI   C
Sbjct: 589 VIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEAC 648

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
                 EA  ++  M++ G  P      ++   L +AG
Sbjct: 649 SADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 161/312 (51%), Gaps = 24/312 (7%)

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
           F  N Y  + L++   K  + E+A +L K+ +E  C PN ++Y+ +I+G C+ G+ D+A 
Sbjct: 72  FQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAF 131

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           E+L EM   G   +   +S+L++G    G+  +A+E +K M +  C  N + Y+ +++GL
Sbjct: 132 ELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNGL 190

Query: 483 CEDGKLREARMVWTQM-----LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           C+  ++ EA  ++  M      S GC+PDV++YS++I  LC A  V++A + F  M  + 
Sbjct: 191 CKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV- 249

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               P+V TY+ L++ LCK    S  ++LL  M ++G   +++  N  L AL +  E  +
Sbjct: 250 -GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQ-E 307

Query: 598 DGTDFLNEL--------------AIR-LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
               F   L              A+  L K  R    ++I+  M++  ++P   T+  ++
Sbjct: 308 KACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSII 367

Query: 643 QELCRPKRIQAA 654
              C+  R+  A
Sbjct: 368 DGFCKAGRMDKA 379



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/295 (25%), Positives = 139/295 (47%), Gaps = 24/295 (8%)

Query: 382 KAEDAMKLWKQMMEKGCKP----NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
           + ED    W      G KP    N    + L++   +  + +EA  +L E +   C  N 
Sbjct: 52  QVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNE 111

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             Y++++ GF ++G+  +A E+  +M +     + + +S LI GLC  G++ EA   +  
Sbjct: 112 IMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKS 171

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS---QPDVFTYNILLNAL 554
           M    C P+V+ Y+++++GLC A  ++EAL+LF++M      S   +PDV +Y+ +++AL
Sbjct: 172 M-GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDAL 230

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL----------- 603
           CK   +  + +    M   GC P++VT +  +  L  K++ P +  + L           
Sbjct: 231 CKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLC-KVDRPSECLELLLHMKEKGFGIN 289

Query: 604 ----NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               N +   L+K        +  E +L+    P   T+   V  LC+  R+  A
Sbjct: 290 IIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEA 344



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 156/399 (39%), Gaps = 71/399 (17%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+   +     +G       +L  M   K      ++  I   + KA  +++A  +F  M
Sbjct: 327 TYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 386

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C     +F ++L+   +      A   +  +VNA     +P   T+N+++  VC 
Sbjct: 387 M-VHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA---GFIPGLQTYNVLMDCVCG 442

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V++A++++ +M  +  +PD  TY  L+  LC+  R+DEA   LD M+ D   P    
Sbjct: 443 ADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAI 502

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLP----------------------------- 295
            + L+  LCK GE+  A  ++DN+   GC P                             
Sbjct: 503 CHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPG 562

Query: 296 ---NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              +  TY+  +  +C  G  D+AV ++++MV     P+E TY  ++  L  L R     
Sbjct: 563 FVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDR----- 617

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
                                          E A+  +++M  +GC P  V Y+ LI   
Sbjct: 618 ------------------------------VESAIAEFEKMASRGCAPGLVTYTLLIGEA 647

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           C     DEA  I   M+  G    A T  +L     ++G
Sbjct: 648 CSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 122/246 (49%), Gaps = 32/246 (13%)

Query: 412 LCRVGKPDEAEEILFEMINN--GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           L +V  PD A    F+   N  G   NA+T + L+  F ++ +  +A  + K+  +  C 
Sbjct: 50  LQQVEDPDVAW-TFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCF 108

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            NE+ Y+ +I+G C+ G++ +A  +  +M  RG K DV+ +S++I GLC  G ++EAL+ 
Sbjct: 109 PNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQ 168

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR-----GCDPDLVTCNI 584
           F  M     +  P+V TYN ++N LCK + I  +++L + M  R     GC+PD+++ + 
Sbjct: 169 FKSM---GEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYST 225

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            + AL +     +         A   FKR R  G             +P   T+  ++  
Sbjct: 226 VIDALCKAQRVDK---------AYEYFKRMRAVG------------CAPNVVTYSSLIDG 264

Query: 645 LCRPKR 650
           LC+  R
Sbjct: 265 LCKVDR 270


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 164/509 (32%), Positives = 265/509 (52%), Gaps = 8/509 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI   +  G  +  E++L ++ +        ++  +   + +   ++ A  +F  M
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V E  C     ++++++N +  EG    AL+    ++      I P   T+ L I  +C 
Sbjct: 260 VKE-GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK---GIEPTVYTYTLPITALCA 315

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +   + AI+L   M  R C P++ TY  L+ GL +  +L+ A+ L  +M  +G  P  VT
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LIN LC  G    A K+   M   G L N  TYN +I GLCL G+++KA+ L ++M+
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P  VTY T+ING +  G   + AR+L  M+E     +E+ Y+ L+SG  K GK E
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A   +++M+E G  PN V Y+ALIDG  + GK D A  +L  M   GC  N  +Y++++
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  +  +  +A +I   M +   + N + Y+ LI GLC +G+ + A  ++  M  R C 
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHS 563
           P++  YSS+I+GLC  G  +EA  L  EM   E K   PD  T+  L++       I H+
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAEILLKEM---ERKGLAPDEVTFTSLIDGFVVLGRIDHA 672

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
             LL  M+D GC P+  T ++ L  L+++
Sbjct: 673 FLLLRRMVDMGCKPNYRTYSVLLKGLQKE 701



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 149/469 (31%), Positives = 241/469 (51%), Gaps = 6/469 (1%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            K  +VE A  L+  M++    + ++ +FN+++N++ ++G    A    + I      ++
Sbjct: 174 AKFEMVEGARNLYKQMLNS-GIQPSLLTFNTLINILSKKGKVREAELILSQIF---QYDL 229

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P+  T+  +I   CR   +D A  +F  M    C+P+  TY TL++GLC E R+DEA+ 
Sbjct: 230 SPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALD 289

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L+EM   G  PT  T+ + I  LC       A +LV  M  +GC PN  TY  LI GL 
Sbjct: 290 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 349

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G L+ A+ L  +M+    +PN VTY  +IN L   GR     ++   ME      N  
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ +I GL   G  E AM L+++M++ G  P  V Y+ LI+G    G  + A  +L  M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
             NGC  + +TY+ L+ GF + GK   A   +++M +     N V Y+ LI G  +DGK+
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  +M   GC P+V +Y+++I+GL       EA K+ ++M+  E    P+V TY 
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV--EQGLLPNVITYT 587

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
            L++ LC+      +  + + M  R C P+L T +  +  L ++ +A +
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 161/573 (28%), Positives = 267/573 (46%), Gaps = 60/573 (10%)

Query: 125 FKAYGKAHLV------EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY-------- 170
            KA+  A +V      E  I+ F+ +      K  +  F S+LN ++++ ++        
Sbjct: 73  LKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRI 132

Query: 171 ------------HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
                        R  +F N I     M    +  + N ++  + +  +V+ A  L+++M
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISG---MGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM 189

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                +P + T+ TL++ L K+ ++ EA L+L ++      P   T+  LI G C+N  L
Sbjct: 190 LNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL 249

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A  + D M  +GC PN VTY+TLI+GLC +G +D+A+ +L+ M+     P   TY   
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I  L  +    +   ++  M++R    N   Y+ LISGL + GK E A+ L+ +M+++G 
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PNTV Y+ALI+ LC  G+   A +I   M  +G  AN  TY+ ++KG    G   KA+ 
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +++ M K   +   V Y+ LI+G    G +  A  +   M   GC+PD   Y+ ++ G  
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 489

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E A   F EM  +E    P+  +Y  L++   K   +  ++ LL  M + GC+P+
Sbjct: 490 KWGKLESASFYFQEM--VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
           + + N  +  L                      K  R S   KI + M+++ L P   T+
Sbjct: 548 VESYNAVINGLS---------------------KENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 639 ERVVQELCRPKRIQAAIN--------KCWSNLY 663
             ++  LCR  R Q A          KC  NLY
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/373 (35%), Positives = 198/373 (53%), Gaps = 5/373 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +E AI L+H M+ E     TV ++N+++N +   G +  AL+ ++ +   +    L NT 
Sbjct: 354 LEVAIGLYHKMLKEGLVPNTV-TYNALINELCVGGRFSTALKIFHWM---EGHGSLANTQ 409

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +IK +C  G ++ A+ LF +M      P + TY TL++G   +  ++ A  LLD M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           + +GC P   T+N L++G  K G+L  A+     M   G  PN V+Y  LI G    G +
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A+SLL RM    C PN  +Y  +INGL K  R  +  ++   M E+    N   Y+TL
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I GL + G+ + A K++  M ++ C PN   YS+LI GLC+ GK DEAE +L EM   G 
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 649

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A +  T++SL+ GF   G+   A  + + M    C  N   YSVL+ GL ++  L E ++
Sbjct: 650 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLEEKI 709

Query: 494 V-WTQMLSRGCKP 505
                    GC P
Sbjct: 710 FPLVDNYFLGCNP 722


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 147/485 (30%), Positives = 249/485 (51%), Gaps = 35/485 (7%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
            A+ L   +   F  + + +S+N VL+V+ +   +  AL  Y  +V+     + P T TF
Sbjct: 121 RALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRD--RVPPTTFTF 178

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
            +  + +CRLG  D A+ L R M    C PD   Y T++  LC +  + EA  LL+EM +
Sbjct: 179 GVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLL 238

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC------- 308
            GC     TF+ ++ G+C  G +  AA+LVD M  KGC+P  +TY  L+ GLC       
Sbjct: 239 MGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADE 298

Query: 309 ------------------------LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
                                    +G L +A  L + M    C P+  TY  +++GL K
Sbjct: 299 ARAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCK 358

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           LGR     R+L  ME++ F  N   Y+ ++    K G  +D   L ++M  KG   N+  
Sbjct: 359 LGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQG 418

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ +I  LC+ G+ DEA  ++ EM + GC  +  +Y++++     + +  +A  +++++ 
Sbjct: 419 YNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL 478

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +   V N + Y+ +IH L  DG+ ++A  +  +M+  GC  DVV+Y+ +I  +C  G+V+
Sbjct: 479 EEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVD 538

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
            +L L  EM   E   +P+  +YNIL++ LCK+  +  +++L   M+++G  PD+VT N 
Sbjct: 539 RSLVLLEEM--AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNT 596

Query: 585 FLTAL 589
            +  L
Sbjct: 597 LINGL 601



 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 248/522 (47%), Gaps = 39/522 (7%)

Query: 87  YSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHL--VEEAIRLFHTM 144
           Y+++       D  +  + LYR    +  V   +F F   A     L   +EA+ L   M
Sbjct: 142 YNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGM 201

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                C      + +V++ +  +G    A    N ++    M    +  TF+ V++ +C 
Sbjct: 202 A-RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEML---LMGCAADVNTFDDVVRGMCG 257

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK------------------------- 239
           LG V  A +L   M  + C P + TY  L+ GLC+                         
Sbjct: 258 LGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTV 317

Query: 240 ------ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
                 E +L EA  L + M + GC P   T+++L++GLCK G +G A +L+  M  KG 
Sbjct: 318 IGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGF 377

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            PN VTY  ++H  C  G  D   +LL+ M A     N   Y  +I  L K GR  +   
Sbjct: 378 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMG 437

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           ++  M  +  + +   Y+T+I  L    + E+A  +++ ++E+G   N + Y+ +I  L 
Sbjct: 438 LIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALL 497

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           R G+  +A  +  EMI +GC+ +  +Y+ L+K   + G   +++ + ++MA+     N V
Sbjct: 498 RDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV 557

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y++LI  LC++ ++R+A  +  QML++G  PD+V Y+++I+GLC  G +  AL L  ++
Sbjct: 558 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
                   PD+ TYNIL++  CK   +  +  LLN  M   C
Sbjct: 618 --HNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  262 bits (669), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 157/509 (30%), Positives = 264/509 (51%), Gaps = 37/509 (7%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ +V ++    LP+ + FN ++  V R+   D  I L+++M  +    D+Y++  
Sbjct: 61  AIDLFSDMVRSRP---LPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  ++L  A+    ++   G  P  VTF+ L++GLC    +  A  L   M    
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM---- 173

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN VT+ TL++GLC +G + +AV+LLDRMV     PN++TYGTI++G+ K+G  V   
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 353 RVLMSMEERKFHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
            +L  MEE   H+  N  IYS +I GL+K+G+  DA  L+ +M EKG  P+   Y+ +ID
Sbjct: 234 NLLRKMEEMS-HIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMID 292

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G C  G+  EA+ +L EM+      N  TYS+L+  + +  K  +A E++ +M     + 
Sbjct: 293 GFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIP 352

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N + Y+ +I G C+  +L  A  ++  M ++GC PDV  ++++I G C A  +++  +L 
Sbjct: 353 NTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELL 412

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA-- 588
           +EM   E     D  TYN L++  C   +++ ++DL   M+  G  PD+VTCN  L    
Sbjct: 413 HEM--TETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 470

Query: 589 ----LKEKLEA---------------PQDGTD----FLNELAIRLFKRQRTSGGFKIVEV 625
               LK+ LE                P +G +      N L   L    +     ++ + 
Sbjct: 471 DNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKE 530

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           M  + + P T T+  ++  LC+  R+  A
Sbjct: 531 MPHRGIVPNTITYSSMINGLCKQSRLDEA 559



 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 166/567 (29%), Positives = 273/567 (48%), Gaps = 74/567 (13%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +E+AI LF  MV       +V  FN ++ V+++       +  Y  +   +   I  +  
Sbjct: 58  LEDAIDLFSDMVRSRPLP-SVIDFNKLMGVVVRMERPDLVISLYQKM---ERKQIPCDVY 113

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           +FN++IK  C    +  A+  F ++     +PD+ T+ TL+ GLC E+R+ EA+ L  +M
Sbjct: 114 SFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM 173

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
               C P  VTF  L+NGLC+ G +  A  L+D M   G  PN++TY T++ G+C  G+ 
Sbjct: 174 ----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDT 229

Query: 314 DKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGR------------------------- 347
             A++LL +M   S   PN V Y  II+GL K GR                         
Sbjct: 230 VSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNC 289

Query: 348 AVDG----------ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
            +DG           R+L  M ERK + N   YS LI+   KE K  +A +L+ +M+ +G
Sbjct: 290 MIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRG 349

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             PNT+ Y+++IDG C+  + D AE + + M   GC+ + FT+++L+ G+  + +     
Sbjct: 350 IIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGT 409

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E+  +M +   V +   Y+ LIHG C  G L  A  +  QM+S G  PD+V  ++++ GL
Sbjct: 410 ELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 469

Query: 518 CNAGSVEEALKLFNEM----LCLEPKS-----QPDVFTYNILLNALCKQSNISHSIDLLN 568
           C+ G +++AL++F  M    + L+        +PDV TYNIL++ L  +     + +L  
Sbjct: 470 CDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYK 529

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
            M  RG  P+ +T +  +                       L K+ R     ++ + M  
Sbjct: 530 EMPHRGIVPNTITYSSMING---------------------LCKQSRLDEATQMFDSMGS 568

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAAI 655
           K  SP   T+  +V   C+  R+   +
Sbjct: 569 KSFSPDVVTFNTLVSGYCKAGRVDDGL 595



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/508 (30%), Positives = 244/508 (48%), Gaps = 57/508 (11%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ LFH M     C+  V +F +++N + +EG    A+   + +V      + PN +
Sbjct: 163 VSEALDLFHQM-----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVED---GLQPNQI 214

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           T+  ++  +C++G   +A+ L R+M  + + +P++  Y  ++DGL K+ R  +A  L  E
Sbjct: 215 TYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTE 274

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV--------------------------- 285
           MQ  G FP   T+N +I+G C +G    A +L+                           
Sbjct: 275 MQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERK 334

Query: 286 --------DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
                   D M  +G +PN +TYN++I G C +  LD A  +   M    C P+  T+ T
Sbjct: 335 FFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNT 394

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I+G     R  DG  +L  M E     +   Y+TLI G    G    A+ L +QM+  G
Sbjct: 395 LIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSG 454

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-----------NGCAANAFTYSSLMKG 446
             P+ V  + L+DGLC  GK  +A E+   M             NG   +  TY+ L+ G
Sbjct: 455 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISG 514

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
               GK  +A E++K+M     V N + YS +I+GLC+  +L EA  ++  M S+   PD
Sbjct: 515 LINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPD 574

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           VV +++++ G C AG V++ L+LF EM         D  TY  L++   K  NI+ ++D+
Sbjct: 575 VVTFNTLVSGYCKAGRVDDGLELFCEMG--RRGIVADAITYITLIHGFRKVGNINGALDI 632

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLE 594
              M+  G  PD +T    LT L  K E
Sbjct: 633 FQEMISSGVYPDTITIRSMLTVLWSKEE 660



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 234/495 (47%), Gaps = 49/495 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +L+      G       +L RM  +     + ++  I     K      A+ L   M
Sbjct: 180 TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKM 239

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +  H K  V  ++++++ + ++G +  A   Y  +   +   I P+  T+N +I   C 
Sbjct: 240 EEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEM---QEKGIFPDLFTYNCMIDGFCS 296

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLM------------------------------ 234
            G    A +L +EM  R   P++ TY  L+                              
Sbjct: 297 SGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTIT 356

Query: 235 -----DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
                DG CK+NRLD A  +   M   GC P   TFN LI+G C    +    +L+  M 
Sbjct: 357 YNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMT 416

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             G + +  TYNTLIHG CL G+L+ A+ L  +M++S   P+ VT  T+++GL   G+  
Sbjct: 417 ETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 476

Query: 350 DGARVLMSMEERKFHVNE-----------YIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           D   +  +M++ K  ++              Y+ LISGL  EGK  +A +L+K+M  +G 
Sbjct: 477 DALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGI 536

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PNT+ YS++I+GLC+  + DEA ++   M +   + +  T+++L+ G+ ++G+    +E
Sbjct: 537 VPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLE 596

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++ +M +   V + + Y  LIHG  + G +  A  ++ +M+S G  PD +   SM+  L 
Sbjct: 597 LFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLW 656

Query: 519 NAGSVEEALKLFNEM 533
           +   ++ A+ +  ++
Sbjct: 657 SKEELKRAVAMLEDL 671



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 110/208 (52%), Gaps = 9/208 (4%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           K  + +FKA  K+ +  +A R F+ +      +  V+++N +++ +I EG +  A E Y 
Sbjct: 476 KDALEMFKAMQKSKMDLDASRPFNGV------EPDVQTYNILISGLINEGKFLEAEELYK 529

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +    H  I+PNT+T++ +I  +C+   +D A Q+F  M  ++  PD+ T+ TL+ G C
Sbjct: 530 EM---PHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYC 586

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K  R+D+ + L  EM   G     +T+  LI+G  K G +  A  +   M   G  P+ +
Sbjct: 587 KAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTI 646

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           T  +++  L  K  L +AV++L+ +  S
Sbjct: 647 TIRSMLTVLWSKEELKRAVAMLEDLQMS 674



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/332 (22%), Positives = 144/332 (43%), Gaps = 56/332 (16%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L SG  +    EDA+ L+  M+     P+ + ++ L+  + R+ +PD    +  +M    
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              + ++++ L+K F    K   A+  +  + K     + V +S L+HGLC + ++ EA 
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++ QM    C+P+VV ++++++GLC  G V EA+ L + M  +E   QP+  TY  +++
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRM--VEDGLQPNQITYGTIVD 221

Query: 553 ALCKQSNISHSIDLL------------------------------------NSMMDRGCD 576
            +CK  +   +++LL                                      M ++G  
Sbjct: 222 GMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIF 281

Query: 577 PDLVTCNIFLTA-------------LKEKLEAPQDGTDFLNELAIRLFKRQRT-SGGFKI 622
           PDL T N  +               L+E LE   +         I  + ++R      ++
Sbjct: 282 PDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEEL 341

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            + ML + + P T T+  ++   C+  R+ AA
Sbjct: 342 YDEMLPRGIIPNTITYNSMIDGFCKQNRLDAA 373


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 141/429 (32%), Positives = 237/429 (55%), Gaps = 6/429 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P+ +T+N++I   C+ G +DNA+Q+   M   N  PD+ TY T++  LC   +L +A+ 
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +LD      C+P  +T+ +LI   CK   +G+A KL+D M  KG  P+ VTYN LI+G+C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +G LD+A+  L+ M +  C PN +T+  I+  +   GR +D  ++L  M  +    +  
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ LI+ L ++G    A+ + ++M   GC PN++ Y+ L+ G C+  K D A E L  M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ GC  +  TY++L+    + GK   AVEI   ++   C    + Y+ +I GL + GK 
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  +M  +G KPD++ YSS++ GL   G V+EA+K F+++  L  +  P+  TYN
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIR--PNAITYN 478

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            ++  LCK      +ID L  M+ + C P   T  I +  +  +  A ++  D LNEL  
Sbjct: 479 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLA-KEALDLLNELCS 537

Query: 609 RLFKRQRTS 617
           R   ++ ++
Sbjct: 538 RGLVKKSSA 546



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 136/416 (32%), Positives = 228/416 (54%), Gaps = 10/416 (2%)

Query: 162 NVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR 221
           NV+I    Y ++ E  N +     MN+ P+ +T+N +++T+C  G +  A+++      +
Sbjct: 131 NVLISG--YCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQK 188

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
            C PD+ TY  L++  CKE+ + +A+ LLDEM+  G  P  VT+NVLING+CK G L  A
Sbjct: 189 ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 248

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            K ++NM   GC PN +T+N ++  +C  G    A  LL  M+   C P+ VT+  +IN 
Sbjct: 249 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 308

Query: 342 LVK---LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           L +   LGRA+D   +L  M       N   Y+ L+ G  KE K + A++    M+ +GC
Sbjct: 309 LCRQGLLGRAID---ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGC 365

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ V Y+ L+  LC+ GK D A EIL ++ + GC+    TY++++ G  + GK  +A++
Sbjct: 366 YPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIK 425

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +  +M +     + + YS L+ GL  +GK+ EA   +  +   G +P+ + Y+S++ GLC
Sbjct: 426 LLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLC 485

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            +   + A+     M  +  + +P   TY IL+  +  +     ++DLLN +  RG
Sbjct: 486 KSRQTDRAIDFLAYM--ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 243/449 (54%), Gaps = 13/449 (2%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SLI+ +   G  K    V+  + +   V    ++  +   Y K+  ++ A+++     D 
Sbjct: 97  SLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVL----DR 152

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
            +    V ++N++L  +   G   +A+E  +  +  +     P+ +T+ ++I+  C+   
Sbjct: 153 MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKE---CYPDVITYTILIEATCKESG 209

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V  A++L  EM  +  +PD+ TY  L++G+CKE RLDEA+  L+ M   GC P  +T N+
Sbjct: 210 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 269

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           ++  +C  G    A KL+ +M  KGC P+ VT+N LI+ LC +G L +A+ +L++M    
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 329

Query: 328 CMPNEVTYGTIINGLV---KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           C PN ++Y  +++G     K+ RA++   +++S   R  + +   Y+TL++ L K+GK +
Sbjct: 330 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVS---RGCYPDIVTYNTLLTALCKDGKVD 386

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+++  Q+  KGC P  + Y+ +IDGL +VGK + A ++L EM   G   +  TYSSL+
Sbjct: 387 VAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLV 446

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G    GK  +A++ + D+       N + Y+ ++ GLC+  +   A      M+S+ CK
Sbjct: 447 SGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCK 506

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           P    Y+ +I G+   G  +EAL L NE+
Sbjct: 507 PTEATYTILIEGIAYEGLAKEALDLLNEL 535



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 223/418 (53%), Gaps = 7/418 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y  SG+  +   VL RM     VV   + +      GK   +++A+ +    
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGK---LKQAMEVLDRQ 185

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +  C   V ++  ++    +E    +A++  + + N       P+ +T+N++I  +C+
Sbjct: 186 LQK-ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSK---PDVVTYNVLINGICK 241

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +D AI+    MP   C+P++ T+  ++  +C   R  +A  LL +M   GC P+ VT
Sbjct: 242 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 301

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN+LIN LC+ G LGRA  +++ M + GC PN ++YN L+HG C +  +D+A+  LD MV
Sbjct: 302 FNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMV 361

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  C P+ VTY T++  L K G+      +L  +  +        Y+T+I GL K GK E
Sbjct: 362 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTE 421

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+KL  +M  KG KP+ + YS+L+ GL R GK DEA +   ++   G   NA TY+S+M
Sbjct: 422 RAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIM 481

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
            G  +S +  +A++    M    C   E  Y++LI G+  +G  +EA  +  ++ SRG
Sbjct: 482 LGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 539



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 238/458 (51%), Gaps = 26/458 (5%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           ++ + R G +++  +    M  R   PDI    +L+ G C+  +  +A  +++ ++  G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  +T+NVLI+G CK+GE+  A +++D M +    P+ VTYNT++  LC  G L +A+ 
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAME 180

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +LDR +  +C P+ +TY  +I    K        ++L  M  +    +   Y+ LI+G+ 
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           KEG+ ++A+K    M   GC+PN + ++ ++  +C  G+  +AE++L +M+  GC+ +  
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ L+      G   +A++I + M  + C  N + Y+ L+HG C++ K+  A      M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +SRGC PD+V Y++++  LC  G V+ A+++ N++        P + TYN +++ L K  
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL--SSKGCSPVLITYNTVIDGLSKVG 418

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
               +I LL+ M  +G  PD++T +  ++ L  + +  +         AI+ F      G
Sbjct: 419 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE---------AIKFFHDLEGLG 469

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                       + P   T+  ++  LC+ ++   AI+
Sbjct: 470 ------------IRPNAITYNSIMLGLCKSRQTDRAID 495



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 215/385 (55%), Gaps = 4/385 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++++   +SG  K    VL R  +++      ++  + +A  K   V +A++L   M
Sbjct: 161 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEM 220

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++   K  V ++N ++N I +EG    A++F N   N       PN +T N++++++C 
Sbjct: 221 RNK-GSKPDVVTYNVLINGICKEGRLDEAIKFLN---NMPSYGCQPNVITHNIILRSMCS 276

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G   +A +L  +M  + C P + T+  L++ LC++  L  A+ +L++M + GC P  ++
Sbjct: 277 TGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLS 336

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++G CK  ++ RA + +D M  +GC P+ VTYNTL+  LC  G +D AV +L+++ 
Sbjct: 337 YNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLS 396

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  C P  +TY T+I+GL K+G+     ++L  M  +    +   YS+L+SGL +EGK +
Sbjct: 397 SKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVD 456

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+K +  +   G +PN + Y++++ GLC+  + D A + L  MI+  C     TY+ L+
Sbjct: 457 EAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILI 516

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCV 469
           +G    G   +A+++  ++     V
Sbjct: 517 EGIAYEGLAKEALDLLNELCSRGLV 541


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  262 bits (669), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 172/603 (28%), Positives = 289/603 (47%), Gaps = 65/603 (10%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SL+  +  +     L + + R+    + +L+ + I  +   G+ H    A ++F  M   
Sbjct: 109 SLLLGFIATDRRHDLHLSILRLTSPSKALLDTA-IGAYVQSGQPH---HAFQIFKKM-KR 163

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLG 206
              +  + + N++LN +++    H ++ F     N A  + I+PN  TFN+VI   C   
Sbjct: 164 LRLRPNLLTCNTLLNSLVRYPSSH-SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLEN 222

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
              +A++    M   NC PD  TY T++D LCK+ RL +A  LL +M+  G  P   T+N
Sbjct: 223 KFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYN 282

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +L+ G CK G L  AA +++ M     LP+  TYN LI+GLC +G +++A  L D M   
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
           K +P+ V+Y T+ING ++  +  +  ++L  M E+    N   ++ ++    KEGK +DA
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVG------------------------------ 416
                +M E G  P+ V Y+ LI+G C+ G                              
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 417 -----KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
                K +EA ++L      G   +  +Y +L+ G+F+ G   +A+++W +M +   + +
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V Y+ +I GLC+ GK  +A     ++L  G  PD   Y++++HG C  G VE+A +  N
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           +M  +E   +PDVFT NILL  LC +  +  ++ L N+ + +G   D VT N  +T+   
Sbjct: 583 KM--VENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITS--- 637

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                             L K  R    F ++  M +K L P   T+  ++  L    RI
Sbjct: 638 ------------------LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI 679

Query: 652 QAA 654
           + A
Sbjct: 680 REA 682



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 255/496 (51%), Gaps = 41/496 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y   +  ++A+   + M  +++C     ++N++L+ + ++G    A +    
Sbjct: 210 TFNIVIYGYCLENKFKDAVEFLNVM-GKYNCSPDNVTYNTILDALCKKGRLGDARDL--- 265

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++ K   +LPN  T+N+++   C++G +  A  +   M   N  PD++TY  L++GLC 
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325

Query: 240 ENRLDEAVLLLDEMQ--------------VDGCF---------------------PTPVT 264
           E R++EA  L DEM+              ++GC                      P  VT
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            N+++   CK G++  A+  +  M   G  P+ VTYNTLI+G C  GN+ +A   +D M 
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 + VT  TI+  L +  +  +  ++L S  +R + ++E  Y TLI G FK+G  +
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+KLW +M EK   P+TV Y+ +I GLC+ GK ++A   L E++ +G   +  TY++++
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+   G   KA +    M +N+   +    ++L+ GLC +G L +A  ++   +S+G  
Sbjct: 566 HGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKA 625

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D V Y+++I  LC  G +++A  L +EM   E +  PD +TYN ++ AL     I  + 
Sbjct: 626 IDTVTYNTLITSLCKEGRLDDAFNLLSEM--EEKELGPDHYTYNAIITALTDSGRIREAE 683

Query: 565 DLLNSMMDRGCDPDLV 580
           + ++ M+++G  P  V
Sbjct: 684 EFMSKMLEKGXLPXQV 699



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 221/450 (49%), Gaps = 4/450 (0%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +++      G       +L  M+    +    ++  +   Y K   ++EA  +   M
Sbjct: 245 TYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
               +    V ++N ++N +  EG    A +  + + N K   +LP+ +++N +I     
Sbjct: 305 TQN-NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK---LLPDVVSYNTLINGCLE 360

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +  A +L  EM  +  +P+  T+  ++   CKE ++D+A   + +M+  G  P  VT
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LING CK G +G A + +D M  K    + VT NT++  LC +  L++A  LL    
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 +EV+YGT+I G  K G      ++   M+E++   +   Y+ +I GL + GK E
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+    +++E G  P+   Y+ ++ G CR G  ++A +   +M+ N    + FT + L+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +G    G   KA++++          + V Y+ LI  LC++G+L +A  + ++M  +   
Sbjct: 601 RGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           PD   Y+++I  L ++G + EA +  ++ML
Sbjct: 661 PDHYTYNAIITALTDSGRIREAEEFMSKML 690



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 211/447 (47%), Gaps = 29/447 (6%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +EEA +L   M +       V S+N+++N  ++   + +  E +  +       + PN +
Sbjct: 329 IEEAFKLRDEM-ENLKLLPDVVSYNTLINGCLE---WSKISEAFKLLEEMSEKGVKPNAV 384

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N+++K  C+ G +D+A     +M      PD  TY TL++G CK   + EA   +DEM
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM 444

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                    VT N ++  LC+  +L  A KL+ +   +G   +EV+Y TLI G    GN+
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A+ L D M   + +P+ VTY  II GL + G+       L  + E     +E  Y+T+
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + G  +EG  E A +   +M+E   KP+    + L+ GLC  G  ++A ++    ++ G 
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGK 624

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A +  TY++L+    + G+   A  +  +M +     +   Y+ +I  L + G++REA  
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE 684

Query: 494 VWTQMLSRGCKP-----------------------DVVAYSSMIHGLCNAGSVEEALKLF 530
             ++ML +G  P                         VAYS  I  LC  G  ++A+++F
Sbjct: 685 FMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIF 744

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQ 557
            E    +     D  TY  L++ L K+
Sbjct: 745 GE--SKQKGITVDKSTYINLMDGLIKR 769



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 198/401 (49%), Gaps = 26/401 (6%)

Query: 260 PTPVTFNVLINGLCK---NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           P  +T N L+N L +   +  +  + +  ++    G +PN  T+N +I+G CL+     A
Sbjct: 168 PNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDA 227

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           V  L+ M    C P+ VTY TI++ L K GR  D   +LM M+ R    N   Y+ L+ G
Sbjct: 228 VEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYG 287

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K G  ++A  + + M +    P+   Y+ LI+GLC  G+ +EA ++  EM N     +
Sbjct: 288 YCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             +Y++L+ G  E  K  +A ++ ++M++     N V +++++   C++GK+ +A    T
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M   G  PD V Y+++I+G C AG++ EA +  +EM       + D  T N +L  LC+
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG--RKNMKMDSVTLNTILRTLCR 465

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
           +  +  +  LL+S   RG   D V+                 GT     L +  FK    
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSY----------------GT-----LIVGYFKDGNV 504

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
               K+ + M +K + P T T+  ++  LC+  + + AI+K
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 177/362 (48%), Gaps = 28/362 (7%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++N   + G    A    + +   K+M +  +++T N +++T+CR   ++ A +L 
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEM-GRKNMKM--DSVTLNTILRTLCREKKLEEAYKLL 476

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                R    D  +Y TL+ G  K+  +D A+ L DEM+     P+ VT+N +I GLC+ 
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+  +A   ++ +   G LP+E TYNT++HG C +G+++KA    ++MV +   P+  T 
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTC 596

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             ++ GL   G      ++  +   +   ++   Y+TLI+ L KEG+ +DA  L  +M E
Sbjct: 597 NILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEE 656

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC---------------------- 433
           K   P+   Y+A+I  L   G+  EAEE + +M+  G                       
Sbjct: 657 KELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEE 716

Query: 434 -AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK--LRE 490
             +++  YS  +K     GK   A+ I+ +  +     ++  Y  L+ GL +  K   +E
Sbjct: 717 SDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKE 776

Query: 491 AR 492
           AR
Sbjct: 777 AR 778



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 165/353 (46%), Gaps = 29/353 (8%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE-FYNHIVN 182
           +   Y KA  + EA R    M      ++ +K  +  LN I++     + LE  Y  + +
Sbjct: 424 LINGYCKAGNMGEAFRTMDEM-----GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           A+      + +++  +I    + G VD A++L+ EM  +   P   TY  ++ GLC+  +
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            ++A+  L+E+   G  P   T+N +++G C+ G++ +A +  + M      P+  T N 
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNI 598

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           L+ GLC++G L+KA+ L +  V+     + VTY T+I  L K GR  D   +L  MEE++
Sbjct: 599 LLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV------------------ 404
              + Y Y+ +I+ L   G+  +A +   +M+EKG  P  V+                  
Sbjct: 659 LGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESD 718

Query: 405 -----YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
                YS  I  LC  GK  +A  I  E    G   +  TY +LM G  +  K
Sbjct: 719 SSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 135/301 (44%), Gaps = 27/301 (8%)

Query: 72  STPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKA 131
           S+ +   Y + + ++ +LI  Y   G+      +   M+ ++ +    ++  I     + 
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
              E+AI   + +++         ++N++L+   +EG   +A +F+N +V     +  P+
Sbjct: 537 GKTEQAISKLNELLESGLLPDET-TYNTILHGYCREGDVEKAFQFHNKMVEN---SFKPD 592

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             T N++++ +C  G+++ A++LF     +    D  TY TL+  LCKE RLD+A  LL 
Sbjct: 593 VFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLS 652

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV------------- 298
           EM+     P   T+N +I  L  +G +  A + +  M  KG LP +V             
Sbjct: 653 EMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSE 712

Query: 299 ----------TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
                      Y+  I  LC +G    A+ +           ++ TY  +++GL+K  ++
Sbjct: 713 TSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772

Query: 349 V 349
           +
Sbjct: 773 I 773


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  261 bits (668), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 165/556 (29%), Positives = 276/556 (49%), Gaps = 27/556 (4%)

Query: 102 LEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE-FHCKRTVKSFNSV 160
           +++++  MRRE   V          +Y    L ++A+ L    +   F  +     +N +
Sbjct: 1   MKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHL 60

Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           LNV++ EG   + LE     + A+   I P+ +TFN ++K +CR   V  A+ +  EM  
Sbjct: 61  LNVLV-EGSKMKLLESVYSEMGAR--GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS 117

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           R   PD  T+ TLM G  +E  ++ A+ +   M   GC  T VT NVLING CK G +  
Sbjct: 118 RGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVED 177

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A   +      G  P+++TYNT ++GLC   ++  A+ ++D MV     P+  TY  ++N
Sbjct: 178 ALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVN 237

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
            L K G+  +   +L  M +R    +   ++TLI+ L    + E+A+ L +Q+  KG  P
Sbjct: 238 CLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSP 297

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           +   ++ LI+ LC+VG P  A  +  EM N+GC  +  TY++L+      GK  KA+++ 
Sbjct: 298 DVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLL 357

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           KDM    C  + + Y+ +I GLC+  ++ EA  V+ QM  +G   + + ++++I GLC  
Sbjct: 358 KDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKD 417

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
             +++A +L N+M  +    QP+  TYN +L   CKQ +I  + D+L +M   G + D+V
Sbjct: 418 KKIDDAFELINQM--ISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVV 475

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
           T    +                       L K  RT    K++  M  K + P    +  
Sbjct: 476 TYGTLING---------------------LCKAGRTQVALKVLRGMRIKGMRPTPKAYNP 514

Query: 641 VVQELCRPKRIQAAIN 656
           V+Q L R   I+ A++
Sbjct: 515 VLQSLFRRNNIRDALS 530



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 162/557 (29%), Positives = 270/557 (48%), Gaps = 13/557 (2%)

Query: 60  KSEQPFSDE---IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRM--RREKR 114
           + +Q F D    I N    L   Q     +  L+         K LE V   M  R  K 
Sbjct: 28  EGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKP 87

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
            V+  +F  + KA  +AH V  A+ +   M           +F +++   ++EG    AL
Sbjct: 88  DVV--TFNTLMKALCRAHQVRTAVLMLEEMSSR-GVAPDETTFTTLMQGFVEEGSIEAAL 144

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
                ++    M      +T N++I   C+LG V++A+   ++      EPD  TY T +
Sbjct: 145 RVKARML---EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFV 201

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +GLC+ + +  A+ ++D M  +G  P   T+N+++N LCKNG+L  A  +++ M  +GCL
Sbjct: 202 NGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCL 261

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+  T+NTLI  LC    L++A+ L  ++      P+  T+  +IN L K+G      R+
Sbjct: 262 PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRL 321

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M+      +E  Y+TLI  L   GK   A+ L K M   GC  +T+ Y+ +IDGLC+
Sbjct: 322 FEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCK 381

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
             + +EAEE+  +M   G + NA T+++L+ G  +  K   A E+   M       N + 
Sbjct: 382 KMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNIT 441

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ ++   C+ G +++A  +   M + G + DVV Y ++I+GLC AG  + ALK+   M 
Sbjct: 442 YNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMR 501

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
               +  P    YN +L +L +++NI  ++ L   M + G  PD +T  I    L     
Sbjct: 502 IKGMRPTPK--AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGG 559

Query: 595 APQDGTDFLNELAIRLF 611
             ++  DF+ E+  + F
Sbjct: 560 PIKEAFDFMLEMVDKGF 576


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  261 bits (667), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 163/514 (31%), Positives = 259/514 (50%), Gaps = 9/514 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + ++I      G+    E ++ ++   +      ++  +   + + H ++ A+++F+ M 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E  C+    ++++++N +   G  + A +    ++      ILP   T    I  +C +
Sbjct: 278 KE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTAHTCTGPIIALCDM 333

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G  ++A +LF +M  + CEP++YTY  L+ GLC    L  A+ L   M  DG FP  VT+
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N LIN L +N  +  A  +++ M   GC PN VTYN +I G C+ G+  KA+ +++ M+ 
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
                N VTY TII G    G      R+L  M +     +E+ Y+ LI G  K  K E 
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A  L+ +M++ G  PN V Y+ALIDG C+  K D A  +L  M  +GC  N  TY+ L+ 
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G  +      A E+ K M +     N V Y+ +I GLC++G    A  ++ +M+ +GC P
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 633

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNISHSI 564
           +++ YSS+I  L   G VEEA  LF E   LE     PD  TY  ++ A      + H+ 
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAE---LERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALK-EKLEAPQ 597
           + L  M+  GC P L T  + +  LK E L A Q
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQ 724



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 220/455 (48%), Gaps = 23/455 (5%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
             ++ ++  + RLG+    +  +  M     +P++  Y  +++ LCK+  + +A  ++ +
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +      P   T+  +I G C+  +L  A ++ + M  +GC PN VTY+TLI+GLC  G 
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +++A  L+  M+    +P   T    I  L  +G   D  R+ + M+ +    N Y Y+ 
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LISGL   G  + A+ L+ +M   G  PNTV Y+ALI+ L    +   A  +L  M  NG
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C+ N  TY+ ++KG+   G   KA+ +  +M +     N V Y+ +I G C+ G    A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +   M   GCKPD  +Y+ +I G C    +E A  LFNEM  ++    P+  TY  L++
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM--VDDGLCPNEVTYTALID 538

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             CK   +  +  LL  M   GC P++ T N+ +  L                      K
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT---------------------K 577

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           +   SG  ++ +VM+++ + P   T+  ++  LC+
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/475 (30%), Positives = 221/475 (46%), Gaps = 38/475 (8%)

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPN 191
           L++ AI LFH M  +     TV ++N+++N++++    +R +++   ++N    N   PN
Sbjct: 370 LLKVAIGLFHRMSRDGVFPNTV-TYNALINILVE----NRRIKYAFVVLNLMGRNGCSPN 424

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +T+N +IK  C LG    A+ +   M  R    ++ TY T++ G C       A+ +LD
Sbjct: 425 IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILD 484

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            M+  GC P   ++  LI G CK  ++  A  L + M   G  PNEVTY  LI G C   
Sbjct: 485 LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 544

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            LD A SLL+ M  S C PN  TY  +I+GL K         +   M E     N   Y+
Sbjct: 545 KLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYT 604

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +I GL K G    A++++ +M+E+GC PN + YS+LI  L + GK +EAE +  E+  +
Sbjct: 605 AMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERH 664

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  TY  +++ +  SGK   A      M K  C      Y VLI GL  +  L + 
Sbjct: 665 GLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQ 724

Query: 492 RMVWTQMLSRGCK-------PDVVAYSS-----------------MIHGLCNAGSVEEAL 527
           R+     +   C         D V+  S                 ++  L  AG   EA 
Sbjct: 725 RLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEAN 784

Query: 528 KLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           +L   M+     SQ   PD   YN LL +L +  N+  ++ +   M  +GC+  L
Sbjct: 785 ELLGSMI-----SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHL 834



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 216/502 (43%), Gaps = 30/502 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I+ Y   GD K   +V+  M +        ++  I K Y  +     A+R+   M
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   CK    S+  ++    +      A   +N +V+     + PN +T+  +I   C+
Sbjct: 487 RDG-GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD---GLCPNEVTYTALIDGYCK 542

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A  L   M    C P++ TY  L+ GL K+N    A  L   M  +G FP  VT
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +I+GLCKNG    A ++ + M  +GCLPN +TY++LI  L  +G +++A +L   + 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE---- 380
               +P+E+TY  +I   +  G+       L  M +       + Y  LI GL  E    
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 722

Query: 381 -------------------GKAEDAMKLWK-QMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                                 +DA+ +   ++ E     +  V +AL+  L   G+  E
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 782

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A E+L  MI+ G   +   Y+SL+           A+ ++K M+   C  +   Y  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC+  + +EAR+ +  ML R   PD V  + +I GL   G  +  ++  + M     + 
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM--ETRRY 900

Query: 541 QPDVFTYNILLNALCKQSNISH 562
            P    Y IL     K+ +  H
Sbjct: 901 MPSFHIYTILAREASKKRSWKH 922



 Score = 46.2 bits (108), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 34/175 (19%), Positives = 69/175 (39%), Gaps = 24/175 (13%)

Query: 483 CEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           C   +     M +  MLS+ G +  + AYS+++  L   G     +  ++ ML      Q
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRML--SEGVQ 212

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           P++  YN ++NALCK  N++ +  ++  + +    PD  T                    
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------------------- 252

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
               + +   ++       ++   M ++   P T T+  ++  LC   R+  A +
Sbjct: 253 -YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 156/517 (30%), Positives = 271/517 (52%), Gaps = 21/517 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  L++    S   +    +L RM+    V  +  +  +   Y KA    +A +    M
Sbjct: 44  TFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 103

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V   HC  TV ++ ++++ + +      A++  + +   +     PN  T+N++++ +C 
Sbjct: 104 VKN-HCLPTVVTYTNIVDGLCKAERTRDAVKLLDEM---RDKGCSPNIYTYNVIVEGLCE 159

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A ++  EM VR   PD+ TY + + GLCK +R+DEA   L  M V    P  V+
Sbjct: 160 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVS 216

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +INGLCK+G+L  A++++D+M  +GC P+ VTY++LI G C  G +++A+ LLD M+
Sbjct: 217 YTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 276

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C PN V Y +++  L +LG       +L+ ME R F  +   Y+  I GL K  + +
Sbjct: 277 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 336

Query: 385 DAMKLWKQMMEKGCKPNT----------VVYSALIDGLCRVGKPDEAEEILFEMINNG-C 433
            A  ++ +M+E+GC PN           ++Y+ L+DGLC+ G+ DEA  +  ++++   C
Sbjct: 337 KAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKIC 396

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             + F Y+ ++    +  +  KA++I K M + NC  N V +++L+HGLC D +L +A  
Sbjct: 397 EPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAET 455

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   M+  G  PD V Y +++  +C  G    AL+LF E   ++    PDV TY+ L+  
Sbjct: 456 MLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEA--VKGGCVPDVVTYSALITG 513

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           L  ++    +  L   +++R   PD  T  +    LK
Sbjct: 514 LVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLK 550



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/446 (31%), Positives = 237/446 (53%), Gaps = 18/446 (4%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++N +L  + +E  + +A   +  +++    +  P+  TF ++++ +CR   ++ A +
Sbjct: 7   VFTYNKLLLQLTREHRHDKASAVFQEMIDK---SCQPDAFTFAILLRGLCRSNQLEKARK 63

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L   M    C PD   Y  L+ G  K     +A   L EM  + C PT VT+  +++GLC
Sbjct: 64  LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K      A KL+D M  KGC PN  TYN ++ GLC +  LD+A  +L+ M      P+ V
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 183

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY + I GL K  R  +  + L  M      V+   Y+T+I+GL K G  + A ++   M
Sbjct: 184 TYNSFIKGLCKCDRVDEARKFLARMPVTPDVVS---YTTVINGLCKSGDLDSASRMLDHM 240

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             +GC P+ V YS+LIDG C+ G+ + A  +L  M+  GC  N   Y+SL+      G  
Sbjct: 241 SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHI 300

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP-------- 505
            KA ++  +M +     + V Y+  I GLC+  ++++A+ V+ +M+ RGC P        
Sbjct: 301 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 360

Query: 506 --DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             D++ Y+ ++ GLC  G  +EA  LF+++L  E   +PDVF YN++L++ CK+  I  +
Sbjct: 361 IVDILLYTVLLDGLCKGGRFDEACALFSKVL-DEKICEPDVFFYNVMLDSHCKRRQIDKA 419

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + +   M+++ C  ++VT NI +  L
Sbjct: 420 LQIHKQMLEKNC-CNVVTWNILVHGL 444



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 226/459 (49%), Gaps = 37/459 (8%)

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
           E +++TY  L+  L +E+R D+A  +  EM    C P   TF +L+ GLC++ +L +A K
Sbjct: 4   EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARK 63

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           L+  M   GC+P++  YN LI G     +  +A   L  MV + C+P  VTY  I++GL 
Sbjct: 64  LLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLC 123

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K  R  D  ++L  M ++    N Y Y+ ++ GL +E K ++A K+ ++M  +G  P+ V
Sbjct: 124 KAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 183

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y++ I GLC+  + DEA + L  M       +  +Y++++ G  +SG    A  +   M
Sbjct: 184 TYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHM 240

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
           +   C  + V YS LI G C+ G++  A  +   ML  GC+P++VAY+S++  L   G +
Sbjct: 241 SNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHI 300

Query: 524 EEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT- 581
            +A  +  EM   E +   PDV +YN  ++ LCK   +  +  + + M++RGC P+  + 
Sbjct: 301 GKAEDMLVEM---ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 582 --------------------------CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
                                     C +F   L EK+  P     F N +     KR++
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD--VFFYNVMLDSHCKRRQ 415

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                +I + ML+K       TW  +V  LC   R+  A
Sbjct: 416 IDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDA 453



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 224/465 (48%), Gaps = 44/465 (9%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D+ + +LI  Y+ + DF      L  M +   +    ++  I     KA    +A++L  
Sbjct: 77  DAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLD 136

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------------YNHIVNA---- 183
            M D+  C   + ++N ++  + +E     A +                YN  +      
Sbjct: 137 EMRDK-GCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKC 195

Query: 184 ----------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
                       M + P+ +++  VI  +C+ G +D+A ++   M  R C PD+ TY +L
Sbjct: 196 DRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSL 255

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +DG CK   ++ A+ LLD M   GC P  V +N L+  L + G +G+A  ++  M  +G 
Sbjct: 256 IDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGF 315

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII----------NGLV 343
            P+ V+YN  I GLC    + KA ++ DRMV   C PN  +Y  +I          +GL 
Sbjct: 316 TPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLC 375

Query: 344 KLGRAVDGARVLMS--MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           K GR  D A  L S  ++E+    + + Y+ ++    K  + + A+++ KQM+EK C  N
Sbjct: 376 KGGR-FDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CN 433

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V ++ L+ GLC   +  +AE +L  M++ G   +  TY +L+    + GK   A+E+++
Sbjct: 434 VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFE 493

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           +  K  CV + V YS LI GL  +    EA +++T+++ R   PD
Sbjct: 494 EAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPD 538



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 131/272 (48%), Gaps = 15/272 (5%)

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G + N   Y+ L+  L R  + D+A  +  EMI+  C  +AFT++ L++G   S +  KA
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            ++   M +  CV ++  Y+ LI G  +     +A     +M+   C P VV Y++++ G
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC A    +A+KL +EM   +    P+++TYN+++  LC++  +  +  +L  M  RG  
Sbjct: 122 LCKAERTRDAVKLLDEM--RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF 179

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------LFKRQRTSGGFKIVE 624
           PD+VT N F+  L  K +   +   FL  + +             L K        ++++
Sbjct: 180 PDVVTYNSFIKGLC-KCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            M  +  +P   T+  ++   C+   ++ A+ 
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMG 270


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 179/612 (29%), Positives = 298/612 (48%), Gaps = 32/612 (5%)

Query: 59  AKSEQPFSD---EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLY-RMRREK- 113
           A  EQP  D    + N+      +  G   +  +I+    +     L  VL   MRRE  
Sbjct: 50  ALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGH 109

Query: 114 --RVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE-FHCKRTVKSFNSVLNVIIQEGLY 170
             RV +  SF+   ++Y +  L  +A+ L    +D  F  +     +N +LNV++ EG  
Sbjct: 110 QVRVGVVHSFL---ESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLV-EGSK 165

Query: 171 HRALE-FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
            + LE  Y+ +       I P+ +TFN ++K +CR   V  A+ +  EM      PD  T
Sbjct: 166 MKLLETVYSEM---GERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETT 222

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           + TLM G  +E  +  A+ +   M   GC PT VT NVLING CK G +  A   +    
Sbjct: 223 FTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEI 282

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             G  P+++TYNT ++GLC  G++  A+ ++D MV     P+  TY  ++N L K G+  
Sbjct: 283 ANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLE 342

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +   +L  M ER    +   ++TLI  L    + E+A+ L +Q+  KG  P+   ++ LI
Sbjct: 343 EAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILI 402

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           + LC+VG P  A  +  EM ++GC  +  TY++L+      GK  KA+++ K+M    C 
Sbjct: 403 NALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCP 462

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + V Y+ +I GLC+  ++ EA  V+ QM  +G   + + ++++I GLC    +++A +L
Sbjct: 463 RSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQL 522

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++M+      QP+  TYN +L   CKQ +I  + D+L +M   G + D+VT    +  L
Sbjct: 523 ISQMI--SEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGL 580

Query: 590 KE--------------KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            +              +++  +      N +   LF+R  T     +   M +    P  
Sbjct: 581 CKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDA 640

Query: 636 STWERVVQELCR 647
            T++ V + LCR
Sbjct: 641 FTYKIVFRGLCR 652



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 156/545 (28%), Positives = 264/545 (48%), Gaps = 6/545 (1%)

Query: 67  DEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK 126
           D + N    L   Q     +  L+         K LE V   M          +F  + K
Sbjct: 134 DLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMK 193

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           A  +AH V  A+ +   M           +F +++   ++EG    AL     ++    M
Sbjct: 194 ALCRAHQVRTAVLMLEEMSSS-GVAPDETTFTTLMQGFVEEGSIKAALRVKARML---EM 249

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
              P  +T N++I   C+LG V++A+   ++      EPD  TY T ++GLC+   +  A
Sbjct: 250 GCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHA 309

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + ++D M  +G  P   T+N+++N LCKNG+L  A  +++ M  +GCLP+  T+NTLI  
Sbjct: 310 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVA 369

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC    L++A+ L  ++      P+  T+  +IN L K+G      R+   M+      +
Sbjct: 370 LCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPD 429

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
           E  Y+TLI  L   GK   A+ L K+M   GC  +TV Y+ +IDGLC+  + +EAEE+  
Sbjct: 430 EVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFD 489

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +M   G + NA T+++L+ G  +  +   A ++   M       N + Y+ ++   C+ G
Sbjct: 490 QMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQG 549

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            +++A  +   M + G + DVV Y ++I+GLC AG  + ALKL   M     ++ P    
Sbjct: 550 DIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPK--A 607

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN ++ +L +++N   +++L   M + G  PD  T  I    L     + ++  DFL E+
Sbjct: 608 YNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEM 667

Query: 607 AIRLF 611
             + F
Sbjct: 668 VDKGF 672



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/476 (30%), Positives = 233/476 (48%), Gaps = 42/476 (8%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           ++TF +L+Q +   G  K+   V  RM        + +   +   Y K   VE+A+    
Sbjct: 220 ETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQ 279

Query: 143 T-MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             + + F   +   ++N+ +N + Q G    AL+  + +V   H    P+  T+N+V+  
Sbjct: 280 QEIANGFEPDQI--TYNTFVNGLCQNGHVGHALKVMDVMVQEGHD---PDVFTYNIVVNC 334

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+ G ++ A  +  +M  R C PDI T+ TL+  LC  NRL+EA+ L  ++ + G  P 
Sbjct: 335 LCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPD 394

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             TFN+LIN LCK G+   A +L + M   GC P+EVTYNTLI  LC  G L KA+ LL 
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M ++ C  + VTY TII+GL K  R  +   V   M+ +    N   ++TLI GL K+ 
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + +DA +L  QM+ +G +PN + Y++++   C+ G   +A +IL  M  NG   +  TY 
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYG 574

Query: 442 SLMKGFFESGKGHKAVEIW-----KDMAKNNCVYNEV----------------------- 473
           +L+ G  ++G+   A+++      K M      YN V                       
Sbjct: 575 TLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEV 634

Query: 474 -------CYSVLIHGLCEDG-KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
                   Y ++  GLC  G  +REA     +M+ +G  P+  ++  +  GL N G
Sbjct: 635 GEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLG 690



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 199/407 (48%), Gaps = 53/407 (13%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V +N L+N L +  ++     +   M  +G  P+ VT+NTL+  LC    +  AV +L+ 
Sbjct: 151 VVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEE 210

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M +S   P+E T+                                   +TL+ G  +EG 
Sbjct: 211 MSSSGVAPDETTF-----------------------------------TTLMQGFVEEGS 235

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A+++  +M+E GC P  V  + LI+G C++G+ ++A   + + I NG   +  TY++
Sbjct: 236 IKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNT 295

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
            + G  ++G    A+++   M +     +   Y+++++ LC++G+L EA+ +  QM+ RG
Sbjct: 296 FVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERG 355

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C PD+  ++++I  LC+   +EEAL L  + + L+  S PDV+T+NIL+NALCK  +   
Sbjct: 356 CLPDITTFNTLIVALCSGNRLEEALDLARQ-VTLKGLS-PDVYTFNILINALCKVGDPQL 413

Query: 563 SIDLLNSMMDRGCDPDLVTCNIF-------------LTALKEKLEA--PQDGTDFLNELA 607
           ++ L   M   GC PD VT N               L  LKE   A  P+    + N + 
Sbjct: 414 ALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTY-NTII 472

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             L K+ R     ++ + M  + +S    T+  ++  LC+ KRI  A
Sbjct: 473 DGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDA 519



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 166/353 (47%), Gaps = 47/353 (13%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FN ++N + + G    AL  +  +   K     P+ +T+N +I  +C LG +  A+ 
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEM---KSSGCTPDEVTYNTLIDNLCSLGKLGKALD 451

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L +EM    C     TY T++DGLCK+ R++EA  + D+M + G     +TFN LI+GLC
Sbjct: 452 LLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLC 511

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K+  +  A +L+  M  +G  PN +TYN+++   C +G++ KA  +L  M A+    + V
Sbjct: 512 KDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVV 571

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TYGT+INGL K GR     ++L  M  +        Y+ +I  LF+     DAM L+++M
Sbjct: 572 TYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREM 631

Query: 394 ME------------------------------------KGCKPNTVVYSALIDGLCRVGK 417
            E                                    KG  P    +  L +GL  +G 
Sbjct: 632 TEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGLLNLGM 691

Query: 418 PD---EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
            D    A EI+ E  + G +       S ++G+ +  K + A+  +  + K N
Sbjct: 692 DDYFIRAIEIIIEKADLGDSD-----VSAIRGYLKIRKFYDALATFGRLLKIN 739



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 152/295 (51%), Gaps = 27/295 (9%)

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              +  +Y+ L++ L +  K +    ++ +M E+G KP+ V ++ L+  LCR  +   A 
Sbjct: 146 IQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAV 205

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +L EM ++G A +  T+++LM+GF E G    A+ +   M +  C   +V  +VLI+G 
Sbjct: 206 LMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGY 265

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C+ G++ +A     Q ++ G +PD + Y++ ++GLC  G V  ALK+ + M+  +    P
Sbjct: 266 CKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMV--QEGHDP 323

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGT 600
           DVFTYNI++N LCK   +  +  +LN M++RGC PD+ T N  + AL    +LE   D  
Sbjct: 324 DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALD-- 381

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                       RQ T  G           LSP   T+  ++  LC+    Q A+
Sbjct: 382 ----------LARQVTLKG-----------LSPDVYTFNILINALCKVGDPQLAL 415



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 26/301 (8%)

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMK-LWKQMMEKGCKPNTVVYSALIDGLCRV 415
           ++    F     +Y  +I  L     A D MK L  +M  +G +    V  + ++   R 
Sbjct: 67  ALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGHQVRVGVVHSFLESYARQ 126

Query: 416 GKPDEAEEILFEMINN--GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
               +A +++   ++   G  A+   Y+ L+    E  K      ++ +M +     + V
Sbjct: 127 QLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVV 186

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            ++ L+  LC   ++R A ++  +M S G  PD   +++++ G    GS++ AL++   M
Sbjct: 187 TFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARM 246

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
           L  E    P   T N+L+N  CK   +  ++  +   +  G +PD +T N F+  L    
Sbjct: 247 L--EMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGL---- 300

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
              Q+G                     K+++VM+Q+   P   T+  VV  LC+  +++ 
Sbjct: 301 --CQNG---------------HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 343

Query: 654 A 654
           A
Sbjct: 344 A 344


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 156/508 (30%), Positives = 259/508 (50%), Gaps = 35/508 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ + ++V ++    LP  + F  ++  V R+   D  I L R+M +R    +IY++  
Sbjct: 60  AIDLFGYMVRSRP---LPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  ++L  A+    ++   G  P+ VTF+ L++GLC    +  A     + F + 
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL----HFFHQI 172

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN + + TL++GLC +G + +AV+LLDRMV     PN++TYGTI++G+ K+G  V   
Sbjct: 173 CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 353 RVLMSMEE-RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +L  MEE  +   N  IYS +I GL+K+G+  DA  L+ +M EKG  PN   Y+ +I+G
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMING 292

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C  G+  EA+ +L EM     + +  T+S L+    + GK  +A E++ +M     + N
Sbjct: 293 FCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPN 352

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + Y+ +I G  +  +L  A  ++  M ++GC PDV+ +S +I G C A  V++ +KL +
Sbjct: 353 TITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLH 412

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
           EM         +  TY  L++  C+  N++ ++DLL  M+  G  P++VTCN  L  L  
Sbjct: 413 EM--SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCN 470

Query: 590 -----------------KEKLEAPQDGTDF------LNELAIRLFKRQRTSGGFKIVEVM 626
                            K  L+A     D        N L   L    + S   ++ E M
Sbjct: 471 NGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEM 530

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + L P T T+  V+  LC+  R+  A
Sbjct: 531 PHRGLVPDTITYNSVIDGLCKQSRLDEA 558



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/472 (31%), Positives = 243/472 (51%), Gaps = 35/472 (7%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +TF+ ++  +C    V  A+  F ++    C+P++  + TLM+GLC+E R+ EAV L
Sbjct: 144 PSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVAL 199

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF-LKGCLPNEVTYNTLIHGLC 308
           LD M  DG  P  +T+  +++G+CK G+   A  L+  M  +    PN V Y+ +I GL 
Sbjct: 200 LDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLW 259

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G    A +L   M      PN  TY  +ING    GR  +  R+L  M ERK   +  
Sbjct: 260 KDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVV 319

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            +S LI+ L KEGK  +A +L+ +M+ +G  PNT+ Y+++IDG  +  + D AE + + M
Sbjct: 320 TFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLM 379

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              GC+ +  T+S L+ G+  + +    +++  +M++   V N + Y+ LIHG C+ G L
Sbjct: 380 ATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNL 439

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKS---- 540
             A  +  +M+S G  P+VV  ++++ GLCN G +++AL++F  M    + L+       
Sbjct: 440 NAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFND 499

Query: 541 -QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            +PDV TYNIL+  L  +   S + +L   M  RG  PD +T N  +           DG
Sbjct: 500 VEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVI-----------DG 548

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                     L K+ R     ++ + M  K  SP   T+  ++   C+  R+
Sbjct: 549 ----------LCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRV 590



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 244/509 (47%), Gaps = 59/509 (11%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+  FH +     CK  V +F +++N + +EG    A+   + +V      + PN +
Sbjct: 162 VSEALHFFHQI-----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVED---GLQPNQI 213

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           T+  ++  +C++G   +A+ L R+M  V   +P++  Y  ++DGL K+ R  +A  L  E
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF----------------------- 289
           MQ  G  P   T+N +ING C +G    A +L+  MF                       
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333

Query: 290 ------------LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
                        +G +PN +TYN++I G   +  LD A  +   M    C P+ +T+  
Sbjct: 334 FFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSI 393

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I+G     R  DG ++L  M  R    N   Y+TLI G  + G    A+ L ++M+  G
Sbjct: 394 LIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSG 453

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN------------NGCAANAFTYSSLMK 445
             PN V  + L+DGLC  GK  +A E +F+++             N    +  TY+ L+ 
Sbjct: 454 VCPNVVTCNTLLDGLCNNGKLKDALE-MFKVMQKSKMDLDASHPFNDVEPDVQTYNILIC 512

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G    GK  +A E++++M     V + + Y+ +I GLC+  +L EA  ++  M S+G  P
Sbjct: 513 GLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSP 572

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           DVV ++++I+G C  G V + L++F EM         +  TY  L++  C+  NI+ ++D
Sbjct: 573 DVVTFTTLINGYCKVGRVGDGLEVFCEM--GRRGIVANAITYRTLIHGFCQVGNINGALD 630

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
           +   M+  G  PD +T    LT L  K E
Sbjct: 631 IFQEMISSGVYPDTITIRNMLTGLWSKEE 659



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 235/459 (51%), Gaps = 22/459 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA----YGKAHLVEEAIRL 140
           T+ +++      GD  S   +L +M    R+   K  + I+ A      K     +A  L
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRI---KPNVVIYSAIIDGLWKDGRQTDAQNL 270

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M  E      + ++N ++N     G +  A      +   K   + P+ +TF+++I 
Sbjct: 271 FSEM-QEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERK---MSPDVVTFSVLIN 326

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            + + G    A +L+ EM  R   P+  TY +++DG  K+NRLD A  +   M   GC P
Sbjct: 327 ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP 386

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             +TF++LI+G C    +    KL+  M  +G + N +TY TLIHG C  GNL+ A+ LL
Sbjct: 387 DVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLL 446

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE-----------YI 369
             M++S   PN VT  T+++GL   G+  D   +   M++ K  ++              
Sbjct: 447 QEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQT 506

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI GL  EGK  +A +L+++M  +G  P+T+ Y+++IDGLC+  + DEA ++   M 
Sbjct: 507 YNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMG 566

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G + +  T+++L+ G+ + G+    +E++ +M +   V N + Y  LIHG C+ G + 
Sbjct: 567 SKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNIN 626

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
            A  ++ +M+S G  PD +   +M+ GL +   ++ A++
Sbjct: 627 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 3/167 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V+++N ++  +I EG +  A E Y  +    H  ++P+T+T+N VI  +C+   +D A Q
Sbjct: 504 VQTYNILICGLINEGKFSEAEELYEEM---PHRGLVPDTITYNSVIDGLCKQSRLDEATQ 560

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F  M  +   PD+ T+ TL++G CK  R+ + + +  EM   G     +T+  LI+G C
Sbjct: 561 MFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFC 620

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           + G +  A  +   M   G  P+ +T   ++ GL  K  L +AV  L
Sbjct: 621 QVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 130/283 (45%), Gaps = 28/283 (9%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L SG  +    +DA+ L+  M+     P  + +  L+  + R+ +PD    +  +M    
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N ++++ L+K F    K   A+  +  + K     + V +S L+HGLC + ++ EA 
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
             + Q+    CKP+V+A++++++GLC  G V EA+ L + M  +E   QP+  TY  +++
Sbjct: 167 HFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRM--VEDGLQPNQITYGTIVD 220

Query: 553 ALCKQSNISHSIDLLNSMMDRG-CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
            +CK  +   +++LL  M +     P++V              A  DG          L+
Sbjct: 221 GMCKMGDTVSALNLLRKMEEVSRIKPNVVI-----------YSAIIDG----------LW 259

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           K  R +    +   M +K +SP   T+  ++   C   R   A
Sbjct: 260 KDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEA 302


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 162/510 (31%), Positives = 255/510 (50%), Gaps = 60/510 (11%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K +NILP+ +++N +I  +C+   ++ A+ L  EM   +CEP+ +TYC LMDGLCKE R+
Sbjct: 2   KRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRV 61

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA+ LL EM+  G     V ++ LI+G C  G L R   L D M  KG  PN V Y+ L
Sbjct: 62  EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 304 IHGLCLK-----------------------------------GNLDKAVSLLDRMVASKC 328
           I+G C K                                   G   KA+ L D M     
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+ VTY  +INGL K G   D  ++  +M E+   +    Y+TLI GL   GK ++AMK
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 389 LWKQMMEKG--CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           L+  ++E G   +P+ + ++ +I GLC+ G+ D+A EI   MI  G   N FT   L+  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           + +SG   KA+E+WK + K   V +   YSV+I G C+   L  A+ ++++M   G  P 
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           +  Y++++  LC   S+E+A +LF EM   E   +PD  ++NI+++   K  +I  + +L
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEM--KESNCEPDTISFNIMIDGTLKAGDIHSAKEL 419

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           LN M   G  PD  T                  + F+N L+ +L + +   G F   + M
Sbjct: 420 LNDMQQMGLTPDAYTY-----------------SSFINRLS-KLGQMEEAKGAF---DSM 458

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +   ++P    ++ +++       I+  IN
Sbjct: 459 IASGITPDNHVYDSLIKGFGLNDEIEEVIN 488



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 236/472 (50%), Gaps = 8/472 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +     K   VEEA+RL   M  +   +  V  ++++++    +G   R    ++ 
Sbjct: 47  TYCILMDGLCKEGRVEEAMRLLGEMKRK-GLEVDVVVYSTLISGFCSKGCLDRGKALFDE 105

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++      I PN + ++ +I   C+ GL   A  +   M  R  +PD+YTY  ++ GLCK
Sbjct: 106 MLEK---GISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCK 162

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           + R  +A+ L D M   G  P+ VT+NVLINGLCK G +G A K+ + M  KG     V+
Sbjct: 163 DGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVS 222

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMV--ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           YNTLI GLC  G LD+A+ L   ++   +   P+ +T+ T+I GL K GR      +  +
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDT 282

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M ER    N +    LI    K G  + AM+LWK++ + G  P++  YS +IDG C++  
Sbjct: 283 MIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHM 342

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            + A+ +   M  +G +   F Y++LM    +     +A  ++++M ++NC  + + +++
Sbjct: 343 LNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNI 402

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           +I G  + G +  A+ +   M   G  PD   YSS I+ L   G +EEA   F+ M+   
Sbjct: 403 MIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIA-- 460

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
               PD   Y+ L+        I   I+LL  M D G   DL   N  LT L
Sbjct: 461 SGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFL 512



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 125/471 (26%), Positives = 225/471 (47%), Gaps = 45/471 (9%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   + K  L  EA  + HTM  E   +  V ++  ++  + ++G   +AL+ ++ +   
Sbjct: 121 LINGFCKKGLWREATAVLHTMT-ERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P+T+T+N++I  +C+ G + +A ++F  M  +    ++ +Y TL+ GLC   +L
Sbjct: 180 GEE---PSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKL 236

Query: 244 DEAVLLLDEMQVDGCF--PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           DEA+ L   +  DG +  P  +TFN +I GLCK G L +A ++ D M  +G   N  T +
Sbjct: 237 DEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCH 296

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEE 360
            LI      G +DKA+ L  R+     +P+  TY  +I+G  K+   ++ A+ L S M+ 
Sbjct: 297 ILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKM-HMLNFAKGLFSRMKI 355

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                  + Y+TL++ L KE   E A +L+++M E  C+P+T+ ++ +IDG  + G    
Sbjct: 356 SGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHS 415

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A+E+L +M   G   +A+TYSS                                    I+
Sbjct: 416 AKELLNDMQQMGLTPDAYTYSS-----------------------------------FIN 440

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            L + G++ EA+  +  M++ G  PD   Y S+I G      +EE + L  +M   +   
Sbjct: 441 RLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQM--ADMGV 498

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
             D+   N +L  LC  +   H ++LL +          ++C+  L  +++
Sbjct: 499 ILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLLMKIQK 549



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 186/397 (46%), Gaps = 9/397 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           +  LI  +   G ++    VL+ M          ++  +     K     +A+ LF  M 
Sbjct: 118 YSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMT 177

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV-NAKHMNILPNTLTFNLVIKTVCR 204
           ++     TV ++N ++N + +EG    A + +  ++   K + ++    ++N +I  +C 
Sbjct: 178 EKGEEPSTV-TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV----SYNTLIMGLCN 232

Query: 205 LGLVDNAIQLFREM--PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            G +D A++LF  +       EPD+ T+ T++ GLCKE RLD+AV + D M   G F   
Sbjct: 233 NGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNL 292

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T ++LI    K+G + +A +L   +   G +P+  TY+ +I G C    L+ A  L  R
Sbjct: 293 FTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSR 352

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M  S   P    Y T++  L K        R+   M+E     +   ++ +I G  K G 
Sbjct: 353 MKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGD 412

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A +L   M + G  P+   YS+ I+ L ++G+ +EA+     MI +G   +   Y S
Sbjct: 413 IHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDS 472

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYN-EVCYSVL 478
           L+KGF  + +  + + + + MA    + + E+  S+L
Sbjct: 473 LIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSIL 509



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 163/331 (49%), Gaps = 9/331 (2%)

Query: 97  GD-FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV-DEFHCKRTV 154
           GD FK  E +L + +R   VV   + I      GK   ++EA++LF +++ D  + +  V
Sbjct: 202 GDAFKIFETMLEKGKR-LEVVSYNTLIMGLCNNGK---LDEAMKLFSSLLEDGNYVEPDV 257

Query: 155 KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
            +FN+V+  + +EG   +A+E Y+ ++         N  T +++I    + G++D A++L
Sbjct: 258 ITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFG---NLFTCHILIGEYIKSGIIDKAMEL 314

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           ++ +      P   TY  ++DG CK + L+ A  L   M++ G  PT   +N L+  LCK
Sbjct: 315 WKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCK 374

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
              L +A +L   M    C P+ +++N +I G    G++  A  LL+ M      P+  T
Sbjct: 375 ESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYT 434

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y + IN L KLG+  +      SM       + ++Y +LI G     + E+ + L +QM 
Sbjct: 435 YSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMA 494

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + G   +  + ++++  LC   +     E+L
Sbjct: 495 DMGVILDLEITNSILTFLCNSAEHLHVMELL 525



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 105/249 (42%), Gaps = 52/249 (20%)

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M + N + + V Y+ +I+GLC++ +L +A  +  +M    C+P+   Y  ++ GLC  G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 523 VEEALKLFNEM------------------LC---------------LEPKSQPDVFTYNI 549
           VEEA++L  EM                   C               LE    P+V  Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL----------------KEKL 593
           L+N  CK+     +  +L++M +RG  PD+ T    +  L                 EK 
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
           E P   T   N L   L K       FKI E ML+K    +  ++  ++  LC   ++  
Sbjct: 181 EEPSTVT--YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE 238

Query: 654 AINKCWSNL 662
           A+ K +S+L
Sbjct: 239 AM-KLFSSL 246


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/514 (31%), Positives = 259/514 (50%), Gaps = 9/514 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + ++I      G+    E ++ ++   +      ++  +   + + H ++ A+++F+ M 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E  C+    ++++++N +   G  + A +    ++      ILP   T    I  +C +
Sbjct: 278 KE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTAHTCTGPIIALCDM 333

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G  ++A +LF +M  + CEP++YTY  L+ GLC    L  A+ L   M  DG FP  VT+
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 393

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N LIN L +N  +  A  +++ M   GC PN VTYN +I G C+ G+  KA+ +++ M+ 
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
                N VTY TII G    G      R+L  M +     +E+ Y+ LI G  K  K E 
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A  L+ +M++ G  PN V Y+ALIDG C+  K D A  +L  M  +GC  N  TY+ L+ 
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G  +      A E+ K M +     N V Y+ +I GLC++G    A  ++ +M+ +GC P
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 633

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNISHSI 564
           +++ YSS+I  L   G VEEA  LF E   LE     PD  TY  ++ A      + H+ 
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAE---LERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALK-EKLEAPQ 597
           + L  M+  GC P L T  + +  LK E L A Q
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQ 724



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 220/455 (48%), Gaps = 23/455 (5%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
             ++ ++  + RLG+    +  +  M     +P++  Y  +++ LCK+  + +A  ++ +
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +      P   T+  +I G C+  +L  A ++ + M  +GC PN VTY+TLI+GLC  G 
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +++A  L+  M+    +P   T    I  L  +G   D  R+ + M+ +    N Y Y+ 
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LISGL   G  + A+ L+ +M   G  PNTV Y+ALI+ L    +   A  +L  M  NG
Sbjct: 361 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C+ N  TY+ ++KG+   G   KA+ +  +M +     N V Y+ +I G C+ G    A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +   M   GCKPD  +Y+ +I G C    +E A  LFNEM  ++    P+  TY  L++
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM--VDDGLCPNEVTYTALID 538

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             CK   +  +  LL  M   GC P++ T N+ +  L                      K
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT---------------------K 577

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           +   SG  ++ +VM+++ + P   T+  ++  LC+
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/475 (30%), Positives = 221/475 (46%), Gaps = 38/475 (8%)

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPN 191
           L++ AI LFH M  +     TV ++N+++N++++    +R +++   ++N    N   PN
Sbjct: 370 LLKVAIGLFHRMSRDGVFPNTV-TYNALINILVE----NRRIKYAFVVLNLMGRNGCSPN 424

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +T+N +IK  C LG    A+ +   M  R    ++ TY T++ G C       A+ +LD
Sbjct: 425 IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILD 484

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            M+  GC P   ++  LI G CK  ++  A  L + M   G  PNEVTY  LI G C   
Sbjct: 485 LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 544

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            LD A SLL+ M  S C PN  TY  +I+GL K         +   M E     N   Y+
Sbjct: 545 KLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYT 604

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +I GL K G    A++++ +M+E+GC PN + YS+LI  L + GK +EAE +  E+  +
Sbjct: 605 AMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERH 664

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  TY  +++ +  SGK   A      M K  C      Y VLI GL  +  L + 
Sbjct: 665 GLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQ 724

Query: 492 RMVWTQMLSRGCK-------PDVVAYSS-----------------MIHGLCNAGSVEEAL 527
           R+     +   C         D V+  S                 ++  L  AG   EA 
Sbjct: 725 RLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEAN 784

Query: 528 KLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           +L   M+     SQ   PD   YN LL +L +  N+  ++ +   M  +GC+  L
Sbjct: 785 ELLGSMI-----SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHL 834



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 214/497 (43%), Gaps = 30/497 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I+ Y   GD K   +V+  M +        ++  I K Y  +     A+R+   M
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   CK    S+  ++    +      A   +N +V+     + PN +T+  +I   C+
Sbjct: 487 RDG-GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD---GLCPNEVTYTALIDGYCK 542

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A  L   M    C P++ TY  L+ GL K+N    A  L   M  +G FP  VT
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +I+GLCKNG    A ++ + M  +GCLPN +TY++LI  L  +G +++A +L   + 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE---- 380
               +P+E+TY  +I   +  G+       L  M +       + Y  LI GL  E    
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 722

Query: 381 -------------------GKAEDAMKLWK-QMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                                 +DA+ +   ++ E     +  V +AL+  L   G+  E
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 782

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A E+L  MI+ G   +   Y+SL+           A+ ++K M+   C  +   Y  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC+  + +EAR+ +  ML R   PD V  + +I GL   G  +  ++  + M     + 
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM--ETRRY 900

Query: 541 QPDVFTYNILLNALCKQ 557
            P    Y IL     K+
Sbjct: 901 MPSFHIYTILAREASKK 917



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 34/175 (19%), Positives = 69/175 (39%), Gaps = 24/175 (13%)

Query: 483 CEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           C   +     M +  MLS+ G +  + AYS+++  L   G     +  ++ ML      Q
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRML--SEGVQ 212

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           P++  YN ++NALCK  N++ +  ++  + +    PD  T                    
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------------------- 252

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
               + +   ++       ++   M ++   P T T+  ++  LC   R+  A +
Sbjct: 253 -YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 172/603 (28%), Positives = 289/603 (47%), Gaps = 65/603 (10%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SL+  +  +     L + + R+    + +L+ + I  +   G+ H    A ++F  M   
Sbjct: 109 SLLLGFIATDRRHDLHLSILRLTSPSKALLDTA-IGAYVQSGQPH---HAFQIFKKM-KR 163

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLG 206
              +  + + N++LN +++    H ++ F     N A  + I+PN  TFN+VI   C   
Sbjct: 164 LRLRPNLLTCNTLLNSLVRYPSSH-SVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLEN 222

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
              +A++    M   NC PD  TY T++D LCK+ RL +A  LL +M+  G  P   T+N
Sbjct: 223 KFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYN 282

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +L+ G CK G L  AA +++ M     LP+  TYN LI+GLC +G +++A  L D M   
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
           K +P+ V+Y T+ING ++  +  +  ++L  M E+    N   ++ ++    KEGK +DA
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVG------------------------------ 416
                +M E G  P+ V Y+ LI+G C+ G                              
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRT 462

Query: 417 -----KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
                K +EA ++L      G   +  +Y +L+ G+F+ G   +A+++W +M +   + +
Sbjct: 463 LCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPS 522

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V Y+ +I GLC+ GK  +A     ++L  G  PD   Y++++HG C  G VE+A +  N
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           +M  +E   +PDVFT NILL  LC +  +  ++ L N+ + +G   D VT N  +T+   
Sbjct: 583 KM--VENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITS--- 637

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                             L K  R    F ++  M +K L P   T+  ++  L    RI
Sbjct: 638 ------------------LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRI 679

Query: 652 QAA 654
           + A
Sbjct: 680 REA 682



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 256/496 (51%), Gaps = 41/496 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y   +  ++A+   + M  +++C     ++N++L+ + ++G    A +    
Sbjct: 210 TFNIVIYGYCLENKFKDAVEFLNVM-GKYNCSPDNVTYNTILDTLCKKGRLGDARDL--- 265

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++ K   +LPN  T+N+++   C++G +  A  +   M   N  PD++TY  L++GLC 
Sbjct: 266 LMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCN 325

Query: 240 ENRLDEAVLLLDEMQ--------------VDGCF---------------------PTPVT 264
           E R++EA  L DEM+              ++GC                      P  VT
Sbjct: 326 EGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVT 385

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            N+++   CK G++  A+  +  M   G  P+ VTYNTLI+G C  GN+ +A   +D M 
Sbjct: 386 HNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG 445

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 + VT  TI+  L +  +  +  ++L S  +R + ++E  Y TLI G FK+G  +
Sbjct: 446 RKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVD 505

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+KLW +M EK   P+TV Y+ +I GLC+ GK ++A   L E++ +G   +  TY++++
Sbjct: 506 RALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTIL 565

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+   G   KA +    M +N+   +    ++L+ GLC +G L +A  ++   +S+G  
Sbjct: 566 HGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKA 625

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D V Y+++I  LC  G +++A  L +EM   E +  PD +TYN ++ AL     I  + 
Sbjct: 626 IDTVTYNTLITSLCKEGRLDDAFNLLSEM--EEKELGPDHYTYNAIITALTDSGRIREAE 683

Query: 565 DLLNSMMDRGCDPDLV 580
           + ++ M+++G  PD V
Sbjct: 684 EFMSKMLEKGNLPDQV 699



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 225/459 (49%), Gaps = 6/459 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +++      G       +L  M+    +    ++  +   Y K   ++EA  +   M
Sbjct: 245 TYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELM 304

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
               +    V ++N ++N +  EG    A +  + + N K   +LP+ +++N +I     
Sbjct: 305 TQN-NLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK---LLPDVVSYNTLINGCLE 360

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +  A +L  EM  +  +P+  T+  ++   CKE ++D+A   + +M+  G  P  VT
Sbjct: 361 WSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVT 420

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LING CK G +G A + +D M  K    + VT NT++  LC +  L++A  LL    
Sbjct: 421 YNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSAR 480

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 +EV+YGT+I G  K G      ++   M+E++   +   Y+ +I GL + GK E
Sbjct: 481 KRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTE 540

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+    +++E G  P+   Y+ ++ G CR G  ++A +   +M+ N    + FT + L+
Sbjct: 541 QAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILL 600

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +G    G   KA++++          + V Y+ LI  LC++G+L +A  + ++M  +   
Sbjct: 601 RGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELG 660

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           PD   Y+++I  L ++G + EA +  ++M  LE  + PD
Sbjct: 661 PDHYTYNAIITALTDSGRIREAEEFMSKM--LEKGNLPD 697



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 212/447 (47%), Gaps = 29/447 (6%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +EEA +L   M +       V S+N+++N  ++   + +  E +  +       + PN +
Sbjct: 329 IEEAFKLRDEM-ENLKLLPDVVSYNTLINGCLE---WSKISEAFKLLEEMSEKGVKPNAV 384

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N+++K  C+ G +D+A     +M      PD  TY TL++G CK   + EA   +DEM
Sbjct: 385 THNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEM 444

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                    VT N ++  LC+  +L  A KL+ +   +G   +EV+Y TLI G    GN+
Sbjct: 445 GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNV 504

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A+ L D M   + +P+ VTY  II GL + G+       L  + E     +E  Y+T+
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTI 564

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + G  +EG  E A +   +M+E   KP+    + L+ GLC  G  ++A ++    ++ G 
Sbjct: 565 LHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGK 624

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A +  TY++L+    + G+   A  +  +M +     +   Y+ +I  L + G++REA  
Sbjct: 625 AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEE 684

Query: 494 VWTQMLSRGCKPD-----------------------VVAYSSMIHGLCNAGSVEEALKLF 530
             ++ML +G  PD                        VAYS  I  LC  G  ++A+++F
Sbjct: 685 FMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIF 744

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQ 557
            E    +     D  TY  L++ L K+
Sbjct: 745 GE--SKQKGITVDKSTYINLMDGLIKR 769



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 198/401 (49%), Gaps = 26/401 (6%)

Query: 260 PTPVTFNVLINGLCK---NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           P  +T N L+N L +   +  +  + +  ++    G +PN  T+N +I+G CL+     A
Sbjct: 168 PNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDA 227

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           V  L+ M    C P+ VTY TI++ L K GR  D   +LM M+ R    N   Y+ L+ G
Sbjct: 228 VEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYG 287

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K G  ++A  + + M +    P+   Y+ LI+GLC  G+ +EA ++  EM N     +
Sbjct: 288 YCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPD 347

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             +Y++L+ G  E  K  +A ++ ++M++     N V +++++   C++GK+ +A    T
Sbjct: 348 VVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTIT 407

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M   G  PD V Y+++I+G C AG++ EA +  +EM       + D  T N +L  LC+
Sbjct: 408 KMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMG--RKNMKMDSVTLNTILRTLCR 465

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
           +  +  +  LL+S   RG   D V+                 GT     L +  FK    
Sbjct: 466 EKKLEEAYKLLSSARKRGYFIDEVSY----------------GT-----LIVGYFKDGNV 504

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
               K+ + M +K + P T T+  ++  LC+  + + AI+K
Sbjct: 505 DRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISK 545



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 176/362 (48%), Gaps = 28/362 (7%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++N   + G    A    + +   K+M +  +++T N +++T+CR   ++ A +L 
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEM-GRKNMKM--DSVTLNTILRTLCREKKLEEAYKLL 476

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                R    D  +Y TL+ G  K+  +D A+ L DEM+     P+ VT+N +I GLC+ 
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+  +A   ++ +   G LP+E TYNT++HG C +G+++KA    ++MV +   P+  T 
Sbjct: 537 GKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTC 596

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             ++ GL   G      ++  +   +   ++   Y+TLI+ L KEG+ +DA  L  +M E
Sbjct: 597 NILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEE 656

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN------------------- 436
           K   P+   Y+A+I  L   G+  EAEE + +M+  G   +                   
Sbjct: 657 KELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEE 716

Query: 437 ----AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK--LRE 490
               +  YS  +K     GK   A+ I+ +  +     ++  Y  L+ GL +  K   +E
Sbjct: 717 SDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKSISKE 776

Query: 491 AR 492
           AR
Sbjct: 777 AR 778



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 166/353 (47%), Gaps = 29/353 (8%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE-FYNHIVN 182
           +   Y KA  + EA R    M      ++ +K  +  LN I++     + LE  Y  + +
Sbjct: 424 LINGYCKAGNMGEAFRTMDEM-----GRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           A+      + +++  +I    + G VD A++L+ EM  +   P   TY  ++ GLC+  +
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            ++A+  L+E+   G  P   T+N +++G C+ G++ +A +  + M      P+  T N 
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNI 598

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           L+ GLC++G L+KA+ L +  V+     + VTY T+I  L K GR  D   +L  MEE++
Sbjct: 599 LLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV------------------ 404
              + Y Y+ +I+ L   G+  +A +   +M+EKG  P+ V+                  
Sbjct: 659 LGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESD 718

Query: 405 -----YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
                YS  I  LC  GK  +A  I  E    G   +  TY +LM G  +  K
Sbjct: 719 SSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 151/341 (44%), Gaps = 29/341 (8%)

Query: 68  EIFNSTPKLG--SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           E F +  ++G  + ++   T  ++++        +    +L   R+    + E S+  + 
Sbjct: 436 EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
             Y K   V+ A++L+  M ++     TV ++N ++  + Q G   +A+   N ++ +  
Sbjct: 496 VGYFKDGNVDRALKLWDEMKEKEIIPSTV-TYNCIIGGLCQCGKTEQAISKLNELLES-- 552

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             +LP+  T+N ++   CR G V+ A Q   +M   + +PD++T   L+ GLC E  L++
Sbjct: 553 -GLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEK 611

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ L +     G     VT+N LI  LCK G L  A  L+  M  K   P+  TYN +I 
Sbjct: 612 ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIIT 671

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEV-----------------------TYGTIINGL 342
            L   G + +A   + +M+    +P++V                        Y   I  L
Sbjct: 672 ALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKEL 731

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              G+  D  R+    +++   V++  Y  L+ GL K  K+
Sbjct: 732 CTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 68/301 (22%), Positives = 136/301 (45%), Gaps = 27/301 (8%)

Query: 72  STPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKA 131
           S+ +   Y + + ++ +LI  Y   G+      +   M+ ++ +    ++  I     + 
Sbjct: 477 SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQC 536

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
              E+AI   + +++         ++N++L+   +EG   +A +F+N +V     +  P+
Sbjct: 537 GKTEQAISKLNELLESGLLPDET-TYNTILHGYCREGDVEKAFQFHNKMVEN---SFKPD 592

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             T N++++ +C  G+++ A++LF     +    D  TY TL+  LCKE RLD+A  LL 
Sbjct: 593 VFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLS 652

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV------------- 298
           EM+     P   T+N +I  L  +G +  A + +  M  KG LP++V             
Sbjct: 653 EMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSE 712

Query: 299 ----------TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
                      Y+  I  LC +G    A+ +           ++ TY  +++GL+K  ++
Sbjct: 713 TSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRKS 772

Query: 349 V 349
           +
Sbjct: 773 I 773


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 163/514 (31%), Positives = 259/514 (50%), Gaps = 9/514 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + ++I      G+    E ++ ++   +      ++  +   + + H ++ A+++F+ M 
Sbjct: 218 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 277

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E  C+    ++++++N +   G  + A +    ++      ILP   T    I  +C +
Sbjct: 278 KE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTAHTCTGPIIALCDM 333

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G  ++A +LF +M  + CEP++YTY  L+ GLC    L  A+ L   M  DG FP  VT+
Sbjct: 334 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTY 393

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N LIN L +N  +  A  +++ M   GC PN VTYN +I G C+ G+  KA+ +++ M+ 
Sbjct: 394 NALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 453

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
                N VTY TII G    G      R+L  M +     +E+ Y+ LI G  K  K E 
Sbjct: 454 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 513

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A  L+ +M++ G  PN V Y+ALIDG C+  K D A  +L  M  +GC  N  TY+ L+ 
Sbjct: 514 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 573

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G  +      A E+ K M +     N V Y+ +I GLC++G    A  ++ +M+ +GC P
Sbjct: 574 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 633

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNISHSI 564
           +++ YSS+I  L   G VEEA  LF E   LE     PD  TY  ++ A      + H+ 
Sbjct: 634 NLLTYSSLIRALGQEGKVEEAENLFAE---LERHGLIPDEITYVKMIEAYIMSGKVEHAF 690

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALK-EKLEAPQ 597
           + L  M+  GC P L T  + +  LK E L A Q
Sbjct: 691 NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQ 724



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 220/455 (48%), Gaps = 23/455 (5%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
             ++ ++  + RLG+    +  +  M     +P++  Y  +++ LCK+  + +A  ++ +
Sbjct: 181 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 240

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +      P   T+  +I G C+  +L  A ++ + M  +GC PN VTY+TLI+GLC  G 
Sbjct: 241 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 300

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +++A  L+  M+    +P   T    I  L  +G   D  R+ + M+ +    N Y Y+ 
Sbjct: 301 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 360

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LISGL   G  + A+ L+ +M   G  PNTV Y+ALI+ L    +   A  +L  M  NG
Sbjct: 361 LISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 420

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C+ N  TY+ ++KG+   G   KA+ +  +M +     N V Y+ +I G C+ G    A 
Sbjct: 421 CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 480

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +   M   GCKPD  +Y+ +I G C    +E A  LFNEM  ++    P+  TY  L++
Sbjct: 481 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM--VDDGLCPNEVTYTALID 538

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             CK   +  +  LL  M   GC P++ T N+ +  L                      K
Sbjct: 539 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT---------------------K 577

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           +   SG  ++ +VM+++ + P   T+  ++  LC+
Sbjct: 578 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 612



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 221/475 (46%), Gaps = 38/475 (8%)

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPN 191
           +++ AI LFH M  +     TV ++N+++N++++    +R +++   ++N    N   PN
Sbjct: 370 ILKVAIGLFHRMSRDGVFPNTV-TYNALINILVE----NRRIKYAFVVLNLMGRNGCSPN 424

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +T+N +IK  C LG    A+ +   M  R    ++ TY T++ G C       A+ +LD
Sbjct: 425 IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILD 484

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            M+  GC P   ++  LI G CK  ++  A  L + M   G  PNEVTY  LI G C   
Sbjct: 485 LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 544

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            LD A SLL+ M  S C PN  TY  +I+GL K         +   M E     N   Y+
Sbjct: 545 KLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYT 604

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +I GL K G    A++++ +M+E+GC PN + YS+LI  L + GK +EAE +  E+  +
Sbjct: 605 AMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERH 664

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  TY  +++ +  SGK   A      M K  C      Y VLI GL  +  L + 
Sbjct: 665 GLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQ 724

Query: 492 RMVWTQMLSRGCK-------PDVVAYSS-----------------MIHGLCNAGSVEEAL 527
           R+     +   C         D V+  S                 ++  L  AG   EA 
Sbjct: 725 RLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEAN 784

Query: 528 KLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           +L   M+     SQ   PD   YN LL +L +  N+  ++ +   M  +GC+  L
Sbjct: 785 ELLGSMI-----SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHL 834



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 214/497 (43%), Gaps = 30/497 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I+ Y   GD K   +V+  M +        ++  I K Y  +     A+R+   M
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   CK    S+  ++    +      A   +N +V+     + PN +T+  +I   C+
Sbjct: 487 RDG-GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD---GLCPNEVTYTALIDGYCK 542

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A  L   M    C P++ TY  L+ GL K+N    A  L   M  +G FP  VT
Sbjct: 543 DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 602

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +I+GLCKNG    A ++ + M  +GCLPN +TY++LI  L  +G +++A +L   + 
Sbjct: 603 YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 662

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE---- 380
               +P+E+TY  +I   +  G+       L  M +       + Y  LI GL  E    
Sbjct: 663 RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 722

Query: 381 -------------------GKAEDAMKLWK-QMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                                 +DA+ +   ++ E     +  V +AL+  L   G+  E
Sbjct: 723 DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 782

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A E+L  MI+ G   +   Y+SL+           A+ ++K M+   C  +   Y  LI 
Sbjct: 783 ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 842

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC+  + +EAR+ +  ML R   PD V  + +I GL   G  +  ++  + M     + 
Sbjct: 843 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM--ETRRY 900

Query: 541 QPDVFTYNILLNALCKQ 557
            P    Y IL     K+
Sbjct: 901 MPSFHIYTILAREASKK 917



 Score = 46.2 bits (108), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 34/175 (19%), Positives = 69/175 (39%), Gaps = 24/175 (13%)

Query: 483 CEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           C   +     M +  MLS+ G +  + AYS+++  L   G     +  ++ ML      Q
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRML--SEGVQ 212

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           P++  YN ++NALCK  N++ +  ++  + +    PD  T                    
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------------------- 252

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
               + +   ++       ++   M ++   P T T+  ++  LC   R+  A +
Sbjct: 253 -YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 179/636 (28%), Positives = 303/636 (47%), Gaps = 54/636 (8%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           IF+S  +   Y      F+ +++   +      +  ++  MR ++    E   +   KAY
Sbjct: 29  IFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAY 88

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            K  + ++A+ LF  MVD F C   ++SFNS+LN  I+   +  A  F+ +   A    +
Sbjct: 89  AKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTA---GM 145

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN  T+N++IK  C+    +    L   M      PDI +Y TL++ L K   L +AV 
Sbjct: 146 SPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVE 205

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGL 307
           L DEM V G  P  + +N+LI+G  + G+  +A ++   +  +  + P+  TYN +I+GL
Sbjct: 206 LFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGL 265

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G LD+++ + +RM  ++  P+  T+ ++I+GL K G      +V   M E     + 
Sbjct: 266 CKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDV 325

Query: 368 YIYSTLISGLFKEG----------------------------------KAEDAMKLWKQM 393
             Y+ ++SGLF+ G                                  K E A+  W+ +
Sbjct: 326 RTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLL 385

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            E+G K ++  Y  LI+GLC+ G  ++A  IL E  N G   + F YSS++ G  + G  
Sbjct: 386 HERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGML 445

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +AVE+   M KN    N   ++ LI+G     KL EA  V  +M S+ C P VV+Y+++
Sbjct: 446 EQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTI 505

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I+GLC A    +A     EM  LE   +PD+ TY++L++ LC+   +  +++L +  +++
Sbjct: 506 INGLCKAERFSDAYLSLKEM--LEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINK 563

Query: 574 GCDPDLVTCNIFLTAL--KEKLEAPQD----------GTDFL--NELAIRLFKRQRTSGG 619
              PDL   NI +  L   +K++   +            D +  N +   L+K       
Sbjct: 564 RLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEA 623

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            KI + +L+  L P   ++    + LC   R+  AI
Sbjct: 624 LKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAI 659



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 254/504 (50%), Gaps = 39/504 (7%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +  A  K+  + +A+ LF  M         V  +N +++  +++G + +A E +  
Sbjct: 186 SYGTLINALAKSGNLLDAVELFDEMSVR-GVNPDVMCYNILIDGFLRKGDFVKANEIWKR 244

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++     ++ P+  T+N++I  +C+LG +D +++++  M      PD++T+ +++ GL K
Sbjct: 245 LLTES--SVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSK 302

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD------------- 286
               + A  +  EM   G  P   T+N +++GL + G+L +  +L +             
Sbjct: 303 AGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSY 362

Query: 287 NMFLKGCLPNE---------------------VTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           NM ++G L N+                      TY  LI+GLC  G L+KA+ +L+    
Sbjct: 363 NMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAEN 422

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
                +   Y ++++GL K G       ++  M++ +  +N +++++LI+G  +  K E+
Sbjct: 423 EGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEE 482

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A+ + ++M  K C P  V Y+ +I+GLC+  +  +A   L EM+  G   +  TYS L+ 
Sbjct: 483 AISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLID 542

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G     K   A+ +W          +   ++++IHGLC   K+  A  ++TQM    C P
Sbjct: 543 GLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVP 602

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           D+V +++++ GL  AG   EALK+++ +L  E   QPD+ +YNI    LC  + +S +I+
Sbjct: 603 DLVTHNTIMEGLYKAGDCVEALKIWDRIL--EAGLQPDIISYNITFKGLCSCARVSDAIE 660

Query: 566 LLNSMMDRGCDPDLVTCNIFLTAL 589
            L   +DRG  P+  T N+ + A+
Sbjct: 661 FLYDALDRGILPNAPTWNVLVRAV 684



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 127/472 (26%), Positives = 246/472 (52%), Gaps = 18/472 (3%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           LI  +   GDF     +  R+  E  V    +++  +     K   ++E++ +++ M   
Sbjct: 225 LIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRM--- 281

Query: 148 FHCKRTVKS-----FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
              K+  KS     F+S+++ + + G ++ A + +  ++ +    + P+  T+N ++  +
Sbjct: 282 ---KKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIES---GLSPDVRTYNAMLSGL 335

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            R G ++   +L+  M   NC  +I +Y  L+ GL    ++++A+     +   G     
Sbjct: 336 FRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 394

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+ +LINGLCKNG L +A ++++    +G   +   Y++++HGLC KG L++AV L+ +
Sbjct: 395 TTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQ 454

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M  ++   N   + ++ING V+  +  +   VL  M+ +        Y+T+I+GL K  +
Sbjct: 455 MKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAER 514

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             DA    K+M+E+G KP+ + YS LIDGLCR  K D A  +  + IN     +   ++ 
Sbjct: 515 FSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNI 574

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G   + K   A+EI+  M + NCV + V ++ ++ GL + G   EA  +W ++L  G
Sbjct: 575 IIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAG 634

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
            +PD+++Y+    GLC+   V +A++   +   L+    P+  T+N+L+ A+
Sbjct: 635 LQPDIISYNITFKGLCSCARVSDAIEFLYD--ALDRGILPNAPTWNVLVRAV 684



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 197/426 (46%), Gaps = 41/426 (9%)

Query: 100 KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNS 159
           +S+EM   RM++ ++     +F  +     KA     A ++F  M+ E      V+++N+
Sbjct: 273 ESMEM-WNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMI-ESGLSPDVRTYNA 330

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +L+ + + G  ++  E +N  V +K  N   N +++N++I+ +     V+ AI  ++ + 
Sbjct: 331 MLSGLFRTGKLNKCFELWN--VMSK--NNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLH 386

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
            R  + D  TY  L++GLCK   L++A+ +L+E + +G       ++ +++GLCK G L 
Sbjct: 387 ERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLE 446

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           +A +L+  M       N   +N+LI+G      L++A+S+L  M +  C P  V+Y TII
Sbjct: 447 QAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTII 506

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ------- 392
           NGL K  R  D    L  M E     +   YS LI GL +  K + A+ LW Q       
Sbjct: 507 NGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLK 566

Query: 393 ----------------------------MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
                                       M +  C P+ V ++ +++GL + G   EA +I
Sbjct: 567 PDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKI 626

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              ++  G   +  +Y+   KG     +   A+E   D      + N   ++VL+  + +
Sbjct: 627 WDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVD 686

Query: 485 DGKLRE 490
           D  L E
Sbjct: 687 DKPLME 692



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 129/262 (49%), Gaps = 10/262 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + S++      G  +    ++++M++ +R +    F  +   Y +A  +EEAI +   M
Sbjct: 431 AYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREM 490

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM---NILPNTLTFNLVIKT 201
             +  C  TV S+N+++N +       +A  F +  ++ K M    + P+ +T++L+I  
Sbjct: 491 KSK-DCAPTVVSYNTIINGLC------KAERFSDAYLSLKEMLEEGLKPDMITYSLLIDG 543

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +CR   VD A+ L+ +   +  +PD+  +  ++ GLC   ++D A+ +  +M+   C P 
Sbjct: 544 LCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPD 603

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT N ++ GL K G+   A K+ D +   G  P+ ++YN    GLC    +  A+  L 
Sbjct: 604 LVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLY 663

Query: 322 RMVASKCMPNEVTYGTIINGLV 343
             +    +PN  T+  ++  +V
Sbjct: 664 DALDRGILPNAPTWNVLVRAVV 685


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 234/403 (58%), Gaps = 2/403 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PNT+TF+ +I  +C  G V  A++L   M     +PD+ T  TL++GLC   +  EA+LL
Sbjct: 254 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 313

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           +D+M   GC P  VT+  ++N +CK+G+   A +L+  M  +    + V Y+ +I GLC 
Sbjct: 314 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 373

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+LD A +L + M       N +TY  +I G    GR  DGA++L  M +RK + N   
Sbjct: 374 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 433

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S LI    KEGK  +A +L K+M+ +G  P+T+ Y++LIDG C+    D+A +++  M+
Sbjct: 434 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 493

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + GC  N  T++ L+ G+ ++ +    +E+++ M+    V + V Y+ LI G CE GKL 
Sbjct: 494 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 553

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A+ ++ +M+SR   P++V Y  ++ GLC+ G  E+AL++F ++   + K + D+  YNI
Sbjct: 554 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI--EKSKMELDIGIYNI 611

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +++ +C  S +  + DL  S+  +G  P + T NI +  L +K
Sbjct: 612 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 654



 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 225/425 (52%), Gaps = 5/425 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ +  ++   H   LP  + F+ +   + +    D  + L ++M ++    ++YT   
Sbjct: 170 AIDLFRDMI---HSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++  C+  +L  A   + ++   G  P  +TF+ LINGLC  G +  A +LVD M   G
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ +T NTL++GLCL G   +A+ L+D+MV   C PN VTYG ++N + K G+     
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  MEER   ++   YS +I GL K G  ++A  L+ +M  KG   N + Y+ LI G 
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+ D+  ++L +MI      N  T+S L+  F + GK  +A E+ K+M       + 
Sbjct: 407 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 466

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           + Y+ LI G C++  L +A  +   M+S+GC P++  ++ +I+G C A  +++ L+LF +
Sbjct: 467 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 526

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M      +  D  TYN L+   C+   ++ + +L   M+ R   P++VT  I L  L + 
Sbjct: 527 MSLRGVVA--DTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 584

Query: 593 LEAPQ 597
            E+ +
Sbjct: 585 GESEK 589



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 236/458 (51%), Gaps = 6/458 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ L   MV+  H K  + + N+++N +   G    A+   + +V        PN +
Sbjct: 272 VSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMV---EYGCQPNAV 327

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  V+  +C+ G    A++L R+M  RN + D   Y  ++DGLCK   LD A  L +EM
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           ++ G     +T+N+LI G C  G     AKL+ +M  +   PN VT++ LI     +G L
Sbjct: 388 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 447

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L   M+     P+ +TY ++I+G  K        +++  M  +    N   ++ L
Sbjct: 448 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 507

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G  K  + +D ++L+++M  +G   +TV Y+ LI G C +GK + A+E+  EM++   
Sbjct: 508 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 567

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  TY  L+ G  ++G+  KA+EI++ + K+    +   Y+++IHG+C   K+ +A  
Sbjct: 568 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 627

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  +  +G KP V  Y+ MI GLC  G + EA  LF +M   E    PD +TYNIL+ A
Sbjct: 628 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM--EEDGHAPDGWTYNILIRA 685

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
                + + S+ L+  +   G   D  T  + +  L +
Sbjct: 686 HLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 723



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/400 (32%), Positives = 208/400 (52%), Gaps = 6/400 (1%)

Query: 196 NLVIKTVCRLGLVD----NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           NL  +   R GLVD    +AI LFR+M      P +  +  L   + K  + D  + L  
Sbjct: 151 NLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCK 210

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           +M++ G      T +++IN  C+  +L  A   +  +   G  PN +T++TLI+GLCL+G
Sbjct: 211 QMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEG 270

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            + +A+ L+DRMV     P+ +T  T++NGL   G+  +   ++  M E     N   Y 
Sbjct: 271 RVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 330

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +++ + K G+   AM+L ++M E+  K + V YS +IDGLC+ G  D A  +  EM   
Sbjct: 331 PVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 390

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  TY+ L+ GF  +G+     ++ +DM K     N V +SVLI    ++GKLREA
Sbjct: 391 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 450

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +  +M+ RG  PD + Y+S+I G C    +++A ++ +  L +     P++ T+NIL+
Sbjct: 451 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD--LMVSKGCDPNIRTFNILI 508

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           N  CK + I   ++L   M  RG   D VT N  +    E
Sbjct: 509 NGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 195/386 (50%), Gaps = 5/386 (1%)

Query: 101 SLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNS 159
           +L M L R   E+ + L+   +  I     K   ++ A  LF+ M +       + ++N 
Sbjct: 343 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNI 401

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           ++      G +    +    ++  K   I PN +TF+++I +  + G +  A +L +EM 
Sbjct: 402 LIGGFCNAGRWDDGAKLLRDMIKRK---INPNVVTFSVLIDSFVKEGKLREAEELHKEMI 458

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
            R   PD  TY +L+DG CKEN LD+A  ++D M   GC P   TFN+LING CK   + 
Sbjct: 459 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 518

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
              +L   M L+G + + VTYNTLI G C  G L+ A  L   MV+ K  PN VTY  ++
Sbjct: 519 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILL 578

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +GL   G +     +   +E+ K  ++  IY+ +I G+    K +DA  L+  +  KG K
Sbjct: 579 DGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVK 638

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P    Y+ +I GLC+ G   EAE +  +M  +G A + +TY+ L++     G   K+V++
Sbjct: 639 PGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKL 698

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCED 485
            +++ +     +     ++I  L +D
Sbjct: 699 IEELKRCGFSVDASTIKMVIDMLSDD 724



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 161/342 (47%), Gaps = 25/342 (7%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A+ L   M+ S+ +P  + +  + + + K  +      +   ME +    N Y  S +
Sbjct: 168 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 227

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+   +  K   A     ++++ G +PNT+ +S LI+GLC  G+  EA E++  M+  G 
Sbjct: 228 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 287

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  T ++L+ G   SGK  +A+ +   M +  C  N V Y  +++ +C+ G+   A  
Sbjct: 288 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 347

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           +  +M  R  K D V YS +I GLC  GS++ A  LFNEM   E K    ++ TYNIL+ 
Sbjct: 348 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITYNILIG 404

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             C          LL  M+ R  +P++VT ++ + +             F+ E  +R  +
Sbjct: 405 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS-------------FVKEGKLREAE 451

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   ++ + M+ + ++P T T+  ++   C+   +  A
Sbjct: 452 --------ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 485


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 167/578 (28%), Positives = 279/578 (48%), Gaps = 47/578 (8%)

Query: 51  METEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGD--FKSLEMVLYR 108
           M++EP  +  +     D + ++ P   +Y       + L++  A S       L  +L R
Sbjct: 21  MKSEP--DPATALAHLDLLVSTWP---AYTPPQPLLFHLLRRLATSSPSRLPRLLGILPR 75

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
           +R   R   E + + +  A+ +A + + A+  F  +     C   V+S N++L+  ++  
Sbjct: 76  LRHRPRFS-ESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRAR 134

Query: 169 LYHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
            +  A  F+  + + A    I PN  T+N++++++C  G +D A+ LF  +  R   PD 
Sbjct: 135 RFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDR 194

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            TY TLM G  K NRLD A+ LLDEM      P  V +N L+ G  +NGE  +A ++ + 
Sbjct: 195 ITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQ 254

Query: 288 MFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
           +    G  PN  TYN ++ GLC  G   +A  + +RMVA+   P+ +TYGT+I+GL +  
Sbjct: 255 LVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRST 314

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK------- 399
                ARV   M +     +  IY++L+ G    G+  +A K W  M   G +       
Sbjct: 315 DVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNI 374

Query: 400 ----------------------------PNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
                                       P+ V +S +I GLC  G  +++ +IL E   +
Sbjct: 375 MLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTS 434

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   + F+YSS++ G  + G+   AV++++ ++ ++   N   Y+ LI+G C+  K  +A
Sbjct: 435 GKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDA 494

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             V++QM    C P  + Y+++IHGLC A    EA +   EM  LE     DV TY  L+
Sbjct: 495 IRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREM--LEKGCMLDVNTYGSLI 552

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             LC+   I  ++ L N ++D+G   D+V  NI +  L
Sbjct: 553 RGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGL 590



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 155/536 (28%), Positives = 277/536 (51%), Gaps = 31/536 (5%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   + K + ++ A+ L   M   +  +     +N++L    + G + +A+  +  
Sbjct: 196 TYSTLMSGFVKNNRLDNALYLLDEM-PSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQ 254

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V  +     PN  T+N+++  +C+LG+   A  ++  M   N +PD+ TY T++ GLC+
Sbjct: 255 LV--RDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCR 312

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              +D A  +  EM   G  P  V +N L+ G C  G +G A K  D+M + G + N  +
Sbjct: 313 STDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSG-IRNVTS 371

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           YN ++ GL   G +DKA  L + +     + P+ VT+ T+I+GL + G A    ++L   
Sbjct: 372 YNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEA 431

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
                 ++E+ YS++ISGL K+G+ +DA+KL++++     KPN+ +Y+ALI+G C+  K 
Sbjct: 432 RTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKF 491

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            +A  +  +M  N C+    TY++L+ G  ++ K  +A    ++M +  C+ +   Y  L
Sbjct: 492 SDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSL 551

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I GLC D K+  A  +W Q+L +G + DVV ++ +IHGLC+AG V+EA +L +EM   + 
Sbjct: 552 IRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEM---KE 608

Query: 539 KSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
           K+   P+V TYN L++   +      +  L  ++++ G  PD+++ N  +  L      P
Sbjct: 609 KNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTP 668

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           + G   LNE                    ML   + P   TW  +V+ + +   IQ
Sbjct: 669 E-GVQLLNE--------------------MLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 98/239 (41%), Gaps = 40/239 (16%)

Query: 76  LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVE 135
           + S++     + +LI  +  +  F     V  +M          ++  +     KA    
Sbjct: 468 MDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYL 527

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA R    M+++  C   V ++ S++  + ++     AL  +N I++     +  + +  
Sbjct: 528 EASRFTREMLEK-GCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDK---GLQTDVVMH 583

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDG------------------ 236
           N++I  +C  G VD A QL  EM  +N C P++ TY TLMDG                  
Sbjct: 584 NILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAIL 643

Query: 237 -----------------LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                            LC  NR  E V LL+EM   G  PT +T+N+L+  + K G +
Sbjct: 644 ENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 156/508 (30%), Positives = 267/508 (52%), Gaps = 35/508 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ + ++V ++    LP+ + F  ++  V R+G  D  I L ++M +     + Y++  
Sbjct: 65  AIDLFGYMVRSRP---LPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           LM   C  ++L  A+    ++   G  PT VTFN L++GLC    +  A  L   M    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM---- 177

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN VT+ TL++GLC +G + +AV+LLDRM+     PN++TYGTI++G+ K+G  V   
Sbjct: 178 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 353 RVLMSMEERKFHV-NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +L  MEE    + N  IY+T+I GL+K+G+  DA  L+ +M EK   P+ V Y+ +I+G
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C  G+  +AE++L EM+      +  T+S+L+  F + GK  +A E++ +M   + + +
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V YS +I G C+  +L  A  ++    ++GC PD++ ++++I G C A  V++ +KL +
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--- 588
           EM   E     +  TY  L++  C+  +++ + DLL  M+  G  P++VTCN  L     
Sbjct: 418 EM--TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCD 475

Query: 589 ---LKEKLEA---------------PQDGTD----FLNELAIRLFKRQRTSGGFKIVEVM 626
              LK+ LE                P +G +      N L   L    +     ++ E M
Sbjct: 476 NGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEM 535

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + + P T T+  ++  LC+  R+  A
Sbjct: 536 PHRGIVPDTITYSSMIDGLCKQSRLDEA 563



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 153/526 (29%), Positives = 256/526 (48%), Gaps = 65/526 (12%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +TFN ++  +C    +  A+ LF +M    C+P++ T+ TLM+GLC+E R+ EAV L
Sbjct: 149 PTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 204

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF-LKGCLPNEVTYNTLIHGLC 308
           LD M  DG  P  +T+  +++G+CK G+   A  L+  M  +   +PN V YNT+I GL 
Sbjct: 205 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLW 264

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G    A +L   M   +  P+ VTY  +ING    GR  D  ++L  M ERK + +  
Sbjct: 265 KDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVV 324

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            +S LI+   KEGK  +A +L+ +M+ +   P+TV YS++IDG C+  + D AE + +  
Sbjct: 325 TFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLT 384

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              GC+ +  T+++L+ G+  + +    +++  +M +   V N + Y+ LIHG C+ G L
Sbjct: 385 PTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 444

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML-------------C 535
             A+ +  +M+S G  P+VV  ++++ GLC+ G +++AL++F  M               
Sbjct: 445 NAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNG 504

Query: 536 LEPKSQ-------------------------------PDVFTYNILLNALCKQSNISHSI 564
           +EP  Q                               PD  TY+ +++ LCKQS +  + 
Sbjct: 505 VEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR--------------- 609
            + +SM  +   PD+VT N  +T    K     DG +   E+  R               
Sbjct: 565 QMFDSMGSKSFSPDVVTFNTLITGYC-KAGMVDDGLELFCEMGQRGIVADAITYITLIYG 623

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             K     G   I + M+   + P T T   ++  L   + ++ A+
Sbjct: 624 FRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAV 669



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 156/510 (30%), Positives = 245/510 (48%), Gaps = 59/510 (11%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EA+ LFH M     CK  V +F +++N + +EG    A+   + ++      + PN +
Sbjct: 167 ISEALDLFHQM-----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLED---GLQPNQI 218

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           T+  ++  +C++G   +A+ L R+M  V +  P++  Y T++DGL K+ R  +A  L  E
Sbjct: 219 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIE 278

Query: 253 MQVDGCFPTPVTFNVLINGLC-----------------------------------KNGE 277
           MQ    FP  VT+N +ING C                                   K G+
Sbjct: 279 MQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGK 338

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
              A +L D M  +  +P+ VTY+++I G C +  LD A  +        C P+ +T+ T
Sbjct: 339 FFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNT 398

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I G  +  R  DG ++L  M E     N   Y+TLI G  + G    A  L ++M+  G
Sbjct: 399 LIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSG 458

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-----------NGCAANAFTYSSLMKG 446
             PN V  + L+DGLC  GK  +A E+   M             NG   +  TY+ L+ G
Sbjct: 459 VCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICG 518

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
               GK  +A E++++M     V + + YS +I GLC+  +L EA  ++  M S+   PD
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPD 578

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           VV ++++I G C AG V++ L+LF EM   +     D  TY  L+    K  NI  ++D+
Sbjct: 579 VVTFNTLITGYCKAGMVDDGLELFCEM--GQRGIVADAITYITLIYGFRKVDNIDGALDI 636

Query: 567 LNSMMDRGCDPDLVTCNIFLTAL--KEKLE 594
              M+  G  PD +T    LT L  KE+LE
Sbjct: 637 FQEMISSGVYPDTITIRNMLTGLWSKEELE 666



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/495 (26%), Positives = 233/495 (47%), Gaps = 49/495 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +L+      G       +L RM  +     + ++  I     K      A+ L   M
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 243

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +  H    V  +N++++ + ++G +  A   +N  +  +   I P+ +T+N +I   C 
Sbjct: 244 EEVSHIIPNVVIYNTIIDGLWKDGRHSDA---HNLFIEMQEKEIFPDIVTYNCMINGFCI 300

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYT----------------------------------- 229
            G   +A QL +EM  R   PD+ T                                   
Sbjct: 301 SGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVT 360

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y +++DG CK+NRLD A  +       GC P  +TFN LI G C+   +    KL+  M 
Sbjct: 361 YSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 420

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             G + N +TY TLIHG C  G+L+ A  LL  M++S   PN VT  T+++GL   G+  
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480

Query: 350 DGARVLMSMEERKFHVNE-----------YIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           D   +  +M++ K  ++              Y+ LI GL  EGK  +A +L+++M  +G 
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+T+ YS++IDGLC+  + DEA ++   M +   + +  T+++L+ G+ ++G     +E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLE 600

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++ +M +   V + + Y  LI+G  +   +  A  ++ +M+S G  PD +   +M+ GL 
Sbjct: 601 LFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLW 660

Query: 519 NAGSVEEALKLFNEM 533
           +   +E A+ +  ++
Sbjct: 661 SKEELERAVAMLEDL 675



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 179/389 (46%), Gaps = 76/389 (19%)

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER------- 361
           +KG LD A+ L   MV S+ +P+ + +  ++  +V++GR      V++S+ ++       
Sbjct: 59  IKG-LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRP----DVVISLHKKMEMLRMP 113

Query: 362 --------------------------------KFHVNEYIYSTLISGLFKEGKAEDAMKL 389
                                            FH     ++TL+ GL  E +  +A+ L
Sbjct: 114 CNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDL 173

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + QM    CKPN V ++ L++GLCR G+  EA  +L  M+ +G   N  TY +++ G  +
Sbjct: 174 FHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCK 229

Query: 450 SGKGHKAVEIWKDMAK-NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            G    A+ + + M + ++ + N V Y+ +I GL +DG+  +A  ++ +M  +   PD+V
Sbjct: 230 MGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIV 289

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ MI+G C +G   +A +L  EML  E K  PDV T++ L+NA  K+     + +L +
Sbjct: 290 TYNCMINGFCISGRWSDAEQLLQEML--ERKINPDVVTFSALINAFVKEGKFFEAEELYD 347

Query: 569 SMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
            M+ R   P  VT +  +     + +L+A +            +F    T G        
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE-----------HMFYLTPTKG-------- 388

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                SP   T+  ++   CR KR+   I
Sbjct: 389 ----CSPDIITFNTLIAGYCRAKRVDDGI 413



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 107/200 (53%), Gaps = 10/200 (5%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI--LFEMIN 430
           L SG  +    +DA+ L+  M+     P+ + +  L+  + R+G+PD    +    EM+ 
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
             C  NA++++ LMK F    K   A+  +  + K       V ++ L+HGLC + ++ E
Sbjct: 112 MPC--NAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISE 169

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++ QM    CKP+VV ++++++GLC  G V EA+ L + M  LE   QP+  TY  +
Sbjct: 170 ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRM--LEDGLQPNQITYGTI 223

Query: 551 LNALCKQSNISHSIDLLNSM 570
           ++ +CK  +   +++LL  M
Sbjct: 224 VDGMCKMGDTVSALNLLRKM 243



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 107/208 (51%), Gaps = 9/208 (4%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           K  + +FKA  K+ +  +A R F+ +      +  V+++N ++  +I EG +  A E Y 
Sbjct: 480 KDALEMFKAMQKSKMDIDASRPFNGV------EPDVQTYNILICGLINEGKFLEAEELYE 533

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +    H  I+P+T+T++ +I  +C+   +D A Q+F  M  ++  PD+ T+ TL+ G C
Sbjct: 534 EM---PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYC 590

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K   +D+ + L  EM   G     +T+  LI G  K   +  A  +   M   G  P+ +
Sbjct: 591 KAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTI 650

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           T   ++ GL  K  L++AV++L+ +  S
Sbjct: 651 TIRNMLTGLWSKEELERAVAMLEDLQMS 678



 Score = 45.4 bits (106), Expect = 0.100,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 29/160 (18%)

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +ML   C  +  +++ ++   C+   +  AL  F ++  L     P V T+N LL+ LC 
Sbjct: 108 EMLRMPC--NAYSFTILMKCFCSCSKLPFALSTFGKITKL--GFHPTVVTFNTLLHGLCV 163

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
           +  IS ++DL + M    C P++VT    +  L                      +  R 
Sbjct: 164 EDRISEALDLFHQM----CKPNVVTFTTLMNGL---------------------CREGRV 198

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                +++ ML+  L P   T+  +V  +C+     +A+N
Sbjct: 199 VEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 238


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/467 (32%), Positives = 243/467 (52%), Gaps = 4/467 (0%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S +  FK     H    +I  + TM       + +    S+L  ++     + A   +  
Sbjct: 85  SLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTS 144

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++ A+  +   + L F++++      G   +AIQ FR +   N +   ++   L D L K
Sbjct: 145 VLEARGTH--QSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMK 202

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            N    A    +E+   G  P    FNVL++ LCK  ++  A  L   +  +G  P  V+
Sbjct: 203 LNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVS 262

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +NTLI+G C  GNLD+   L   M+ ++  P+  TY  +INGL K G+  D  ++ + M 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R    N+  ++TLI+G    G+A+  M++++QM+ KG KP+ + Y+ LI+GLC+VG   
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA++++ EM   G   + FTY+ L+ G  + G    A+EI K+M K     + V ++ LI
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G C +G++ EA     +ML  G KPD   Y+ +IHG C  G V+   KL  EM C    
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQC--DG 500

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             P V TYN+LLN LCKQ  + ++  LL++M++ G  PD +T NI L
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 134/423 (31%), Positives = 234/423 (55%), Gaps = 6/423 (1%)

Query: 112 EKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL 169
           E R   + + +F  +  AY  +    +AI+ F  +V + + +    S   + + +++  L
Sbjct: 147 EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFR-LVRKHNLQIPFHSCGYLFDRLMKLNL 205

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
              A  FY  I++  +    P+   FN+++  +C+   ++ A  LF E+  R   P + +
Sbjct: 206 TSPAWAFYEEILDCGYP---PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVS 262

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           + TL++G CK   LD+   L   M  +  FP   T++VLINGLCK G+L  A KL   M 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            +G +PN+VT+ TLI+G C+ G  D  + +  +M+     P+ +TY T+INGL K+G   
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +  ++++ M +R    +++ Y+ LI G  KEG  E A+++ K+M+++G + + V ++ALI
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            G CR G+  EAE  L EM+  G   +  TY+ ++ GF + G      ++ K+M  +  V
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHV 502

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
              V Y+VL++GLC+ G+++ A M+   ML+ G  PD + Y+ ++ G C  G+ E+  KL
Sbjct: 503 PGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKL 562

Query: 530 FNE 532
            +E
Sbjct: 563 QSE 565



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 212/452 (46%), Gaps = 7/452 (1%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           +  +F S  +       +  F  L+  Y +SG F         +R+    +   S  ++F
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
               K +L   A   +  ++D  +     K FN +++ + +E   + A   +  I     
Sbjct: 198 DRLMKLNLTSPAWAFYEEILDCGYPPDVCK-FNVLMHRLCKEHKINEAQLLFGEI---GK 253

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             + P  ++FN +I   C+ G +D   +L R M      PD++TY  L++GLCKE +LD+
Sbjct: 254 RGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDD 313

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  L  EM   G  P  VTF  LING C  G      ++   M  KG  P+ +TYNTLI+
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLIN 373

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  G+L +A  L+  M      P++ TY  +I+G  K G       +   M +    +
Sbjct: 374 GLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIEL 433

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   ++ LISG  +EG+  +A +  ++M+E G KP+   Y+ +I G C+ G      ++L
Sbjct: 434 DNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLL 493

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM  +G      TY+ L+ G  + G+   A  +   M     V +++ Y++L+ G C+ 
Sbjct: 494 KEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKH 553

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           G   +   + ++   +G   D  +Y+S+I  L
Sbjct: 554 GNREDFDKLQSE---KGLVQDYGSYTSLIGDL 582



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/371 (22%), Positives = 157/371 (42%), Gaps = 69/371 (18%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           +Y T+ H LC    L +A SLL  +V+ K                  G+    +     +
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVVSRK------------------GKNSASSVFTSVL 146

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E R  H +  ++S L++     G   DA++ ++ + +   +        L D L ++   
Sbjct: 147 EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLT 206

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             A     E+++ G   +                               C +N     VL
Sbjct: 207 SPAWAFYEEILDCGYPPDV------------------------------CKFN-----VL 231

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           +H LC++ K+ EA++++ ++  RG +P VV+++++I+G C +G++++  +L   M+  E 
Sbjct: 232 MHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM--EN 289

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA---------- 588
           +  PDVFTY++L+N LCK+  +  +  L   M DRG  P+ VT    +            
Sbjct: 290 RVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLG 349

Query: 589 --LKEKLEAPQDGTDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
             + +++       D +  N L   L K        K+V  M Q+ L P   T+  ++  
Sbjct: 350 MEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409

Query: 645 LCRPKRIQAAI 655
            C+   +++A+
Sbjct: 410 CCKEGDLESAL 420


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 142/429 (33%), Positives = 236/429 (55%), Gaps = 11/429 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T N ++   C    +  A+ L  +M     +PD  T+ TL+ GL + N+  EAV L
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           ++ M V GC P  VT+  +INGLCK GE   A  L++ M       + V Y+T+I  LC 
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             ++D A++L   M      P+  TY ++I+ L   GR  D +R+L  M ERK + N   
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +++LI    KEGK  +A KL+ +M+++   PN V Y++LI+G C   + DEA++I   M+
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +  C  +  TY++L+ GF ++ K    +E+++DM++   V N V Y+ LIHG  +     
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A+MV+ QM+S G  P+++ Y++++ GLC  G +E+A+ +F  +   + K +PD++TYNI
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL--QKSKMEPDIYTYNI 490

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +   +CK   +    DL  S+  +G  PD++  N  ++   +K          L E A  
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK---------GLKEEAYT 541

Query: 610 LFKRQRTSG 618
           LF + +  G
Sbjct: 542 LFIKMKEDG 550



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 260/529 (49%), Gaps = 79/529 (14%)

Query: 132 HL-VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
           HL ++EA+ LF  MV        V+ F+ +L+ I +   +   + F       + M IL 
Sbjct: 43  HLKLDEAVDLFGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISF------GEKMEILG 95

Query: 191 ---NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
              N  T+N++I  +CR   +  A+ +  +M      P I T  +L++G C  NR+ EAV
Sbjct: 96  VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+D+M   G  P  VTF  L++GL ++ +   A  LV+ M +KGC P+ VTY  +I+GL
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL---------------------- 345
           C +G  D A++LL++M   K   + V Y T+I+ L K                       
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275

Query: 346 -------------GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
                        GR  D +R+L  M ERK + N   +++LI    KEGK  +A KL+ +
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+++   PN V Y++LI+G C   + DEA++I   M++  C  +  TY++L+ GF ++ K
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
               +E+++DM++   V N V Y+ LIHG  +      A+MV+ QM+S G  P+++ Y++
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455

Query: 513 MIHGLCNAGSVEEALKLF------------------NEMLCLEPKSQ------------- 541
           ++ GLC  G +E+A+ +F                  +E +C   K +             
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515

Query: 542 --PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
             PDV  YN +++  CK+     +  L   M + G  PD  T N  + A
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/490 (29%), Positives = 248/490 (50%), Gaps = 42/490 (8%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S N++L++ + E     A++ +  +V ++     P+ + F+ ++  + ++   D  I   
Sbjct: 37  SRNALLHLKLDE-----AVDLFGEMVKSRP---FPSIVEFSKLLSAIAKMKKFDLVISFG 88

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M +     ++YTY  +++ LC+ ++L  A+ +L +M   G  P+ VT N L+NG C  
Sbjct: 89  EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +  A  LVD M   G  P+ VT+ TL+HGL       +AV+L++RMV   C P+ VTY
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
           G +INGL K G       +L  ME+ K   +  IYST+I  L K    +DA+ L+ +M  
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KG +P+   YS+LI  LC  G+  +A  +L +M+      N  T++SL+  F + GK  +
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A +++ +M + +   N V Y+ LI+G C   +L EA+ ++T M+S+ C PDVV Y+++I+
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388

Query: 516 GLCNAGSVEEALKLFNEM---------------------------------LCLEPKSQP 542
           G C A  V + ++LF +M                                   +     P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           ++ TYN LL+ LCK   +  ++ +   +     +PD+ T NI    +  K    +DG D 
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC-KAGKVEDGWDL 507

Query: 603 LNELAIRLFK 612
              L+++  K
Sbjct: 508 FCSLSLKGVK 517



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 229/442 (51%), Gaps = 8/442 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EA+ L   MV+  +   TV +F ++++ + Q      A+     +V        P+ +
Sbjct: 151 ISEAVALVDQMVEMGYQPDTV-TFTTLVHGLFQHNKASEAVALVERMVVK---GCQPDLV 206

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  VI  +C+ G  D A+ L  +M     E D+  Y T++D LCK   +D+A+ L  EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P   T++ LI+ LC  G    A++L+ +M  +   PN VT+N+LI     +G L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L D M+     PN VTY ++ING     R  +  ++   M  +    +   Y+TL
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G  K  K  D M+L++ M  +G   NTV Y+ LI G  +    D A+ +  +M+++G 
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  TY++L+ G  ++GK  KA+ +++ + K+    +   Y+++  G+C+ GK+ +   
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  +  +G KPDV+AY++MI G C  G  EEA  LF +M   E    PD  TYN L+ A
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK--EDGPLPDSGTYNTLIRA 564

Query: 554 LCKQSNISHSIDLLNSMMDRGC 575
             +  + + S +L+  M  R C
Sbjct: 565 HLRDGDKAASAELIKEM--RSC 584



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 216/419 (51%), Gaps = 6/419 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ L   MV +  C+  + ++ +V+N + + G    AL   N +   K   I  + + +
Sbjct: 188 EAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK---IEADVVIY 243

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           + VI ++C+   VD+A+ LF EM  +   PD++TY +L+  LC   R  +A  LL +M  
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
               P  VTFN LI+   K G+L  A KL D M  +   PN VTYN+LI+G C+   LD+
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +   MV+  C+P+ VTY T+ING  K  + VDG  +   M  R    N   Y+TLI 
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G F+    ++A  ++KQM+  G  PN + Y+ L+DGLC+ GK ++A  +   +  +    
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           + +TY+ + +G  ++GK     +++  ++      + + Y+ +I G C+ G   EA  ++
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
            +M   G  PD   Y+++I      G    + +L  EM     +   D  TY ++ + L
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC--RFAGDASTYGLVTDML 600



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 23/202 (11%)

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +AV+++ +M K+    + V +S L+  + +  K         +M   G   ++  Y+ MI
Sbjct: 48  EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           + LC    +  AL +  +M+ L     P + T N LLN  C  + IS ++ L++ M++ G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKL--GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             PD VT                        L   LF+  + S    +VE M+ K   P 
Sbjct: 166 YQPDTVT---------------------FTTLVHGLFQHNKASEAVALVERMVVKGCQPD 204

Query: 635 TSTWERVVQELCRPKRIQAAIN 656
             T+  V+  LC+      A+N
Sbjct: 205 LVTYGAVINGLCKRGEPDLALN 226


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  260 bits (664), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/495 (31%), Positives = 266/495 (53%), Gaps = 10/495 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T  +++  Y+  G+   +E  LY  +  +  +   SF +  +   Y + + V  A ++F+
Sbjct: 216 TLNTMVNAYSKMGNI--VEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFN 273

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M ++  C+R   S+ ++++ + + G     +  +  +   +  +  P   T+ ++I  +
Sbjct: 274 MMPNK-GCRRNEVSYTTIIHGLCEAGRIDEGISLFKKM---REDDCYPTVRTYTVIIHAL 329

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
                    + LF EM  R+CEP+++TY  ++D +CKE +LDE+  +L+EM   G  P+ 
Sbjct: 330 FGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSV 389

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N LI G C+ G +  A +++  M    C PNE TYN LI G   + ++ KA++LL +
Sbjct: 390 VTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSK 449

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+ SK  P+ VTY ++I+   K G      ++L  ++E     +++ YS  I  L K  +
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKR 509

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            E+A  L+  + EKG K N V+Y+ALIDG C+ GK DEA  +L  M +  C  N+ TY+S
Sbjct: 510 MEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G  + GK  + + + ++M+K         Y++LI  +  +G    A  V+ QM+S G
Sbjct: 570 LIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFG 629

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            KPDV  Y++ IH  C +G+V+EA  +   M  +E    PD  TY +L++A  +      
Sbjct: 630 HKPDVYTYTAFIHTYCTSGNVKEAEGMMARM--IEAGVMPDSLTYTLLISAYERLGLAYD 687

Query: 563 SIDLLNSMMDRGCDP 577
           + ++L  M+D GCDP
Sbjct: 688 AFNVLKRMLDAGCDP 702



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 244/485 (50%), Gaps = 19/485 (3%)

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY--------NHIVNA--KHMN 187
           I   +TMV+ +     +   N  ++ I Q GL   +  +         N+ VN+  K  N
Sbjct: 214 IYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFN 273

Query: 188 ILPNT------LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           ++PN       +++  +I  +C  G +D  I LF++M   +C P + TY  ++  L   +
Sbjct: 274 MMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGND 333

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           R  E + L +EM+   C P   T+ V+++ +CK  +L  + ++++ M  KG +P+ VTYN
Sbjct: 334 RNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYN 393

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI G C +G ++ A+ +L  M ++ C PNE TY  +I G  K         +L  M E 
Sbjct: 394 ALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLES 453

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
           K   +   Y++LI    K G  + A KL   + E G  P+   YS  ID LC+  + +EA
Sbjct: 454 KLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEA 513

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            ++   +   G  AN   Y++L+ G  ++GK  +A+ + + M   +C+ N   Y+ LI+G
Sbjct: 514 CDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYG 573

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           +C++GK++E   +   M   G KP V  Y+ +I  +   G  + A ++FN+M+    K  
Sbjct: 574 VCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHK-- 631

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PDV+TY   ++  C   N+  +  ++  M++ G  PD +T  + ++A  E+L    D  +
Sbjct: 632 PDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAY-ERLGLAYDAFN 690

Query: 602 FLNEL 606
            L  +
Sbjct: 691 VLKRM 695



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/518 (28%), Positives = 241/518 (46%), Gaps = 44/518 (8%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA--------------KHMNILPNTLTFN 196
           K TVKS + +L ++I   L+    +    ++ A              + MN   N + F 
Sbjct: 117 KHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFK 176

Query: 197 LVIKT-------VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           L +++       + R  ++D   +++ EM      P+IYT  T+++   K   + EA L 
Sbjct: 177 LSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLY 236

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           + ++   G  P   T+  LI G C+N ++  A K+ + M  KGC  NEV+Y T+IHGLC 
Sbjct: 237 VSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCE 296

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +D+ +SL  +M    C P   TY  II+ L    R ++G  +   M ER    N + 
Sbjct: 297 AGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHT 356

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ ++  + KE K +++ ++  +MMEKG  P+ V Y+ALI G C  G+ + A EIL  M 
Sbjct: 357 YTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLME 416

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +N C  N  TY+ L+ GF +    HKA+ +   M ++    + V Y+ LIH  C+ G   
Sbjct: 417 SNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFD 476

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  +   +   G  PD   YS  I  LC +  +EEA  LFN +   E   + +   Y  
Sbjct: 477 SAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSL--KEKGIKANEVMYTA 534

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L++  CK   I  +I LL  M    C P+  T                      N L   
Sbjct: 535 LIDGHCKAGKIDEAISLLERMHSEDCLPNSST---------------------YNSLIYG 573

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           + K  +   G  +VE M +  + P  +T+  +++E+ R
Sbjct: 574 VCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLR 611



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 209/430 (48%), Gaps = 23/430 (5%)

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
           + +Y  L+  L +   +DE   +  EM  D   P   T N ++N   K G +  A   V 
Sbjct: 179 VRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVS 238

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            +F  G  P+  TY +LI G C   +++ A  + + M    C  NEV+Y TII+GL + G
Sbjct: 239 KIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAG 298

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           R  +G  +   M E   +     Y+ +I  LF   +  + M L+ +M E+ C+PN   Y+
Sbjct: 299 RIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYT 358

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            ++D +C+  K DE+  IL EM+  G   +  TY++L++G+ E G+   A+EI   M  N
Sbjct: 359 VMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESN 418

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
           NC  NE  Y+ LI G  +   + +A  + ++ML     P +V Y+S+IH  C AG  + A
Sbjct: 419 NCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            KL +  L  E    PD +TY++ ++ LCK   +  + DL NS+ ++G   +     +  
Sbjct: 479 YKLLD--LLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKAN----EVMY 532

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
           TAL        DG            K  +      ++E M  +   P +ST+  ++  +C
Sbjct: 533 TAL-------IDGH----------CKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVC 575

Query: 647 RPKRIQAAIN 656
           +  ++Q  ++
Sbjct: 576 KEGKVQEGLS 585



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 221/493 (44%), Gaps = 44/493 (8%)

Query: 57  GNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVV 116
           GN      +  +IF +     S+     T+ SLI  Y  + D  S   V   M  +    
Sbjct: 228 GNIVEANLYVSKIFQAGLSPDSF-----TYTSLILGYCRNNDVNSAYKVFNMMPNKGCRR 282

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
            E S+  I     +A  ++E I LF  M ++  C  TV+++  +++ +         ++ 
Sbjct: 283 NEVSYTTIIHGLCEAGRIDEGISLFKKMRED-DCYPTVRTYTVIIHALFGNDRNLEGMDL 341

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           +N +   +  +  PN  T+ +++  +C+   +D + ++  EM  +   P + TY  L+ G
Sbjct: 342 FNEM---RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRG 398

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C+E R++ A+ +L  M+ + C P   T+N LI G  K   + +A  L+  M      P+
Sbjct: 399 YCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPS 458

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VTYN+LIH  C  G+ D A  LLD +  +  +P++ TY   I+ L K  R  +   +  
Sbjct: 459 LVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFN 518

Query: 357 SMEERKFHVNEYIYSTLISG-----------------------------------LFKEG 381
           S++E+    NE +Y+ LI G                                   + KEG
Sbjct: 519 SLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEG 578

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K ++ + + + M + G KP    Y+ LI+ + R G  D A  +  +M++ G   + +TY+
Sbjct: 579 KVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYT 638

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           + +  +  SG   +A  +   M +   + + + Y++LI      G   +A  V  +ML  
Sbjct: 639 AFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDA 698

Query: 502 GCKPDVVAYSSMI 514
           GC P    ++++I
Sbjct: 699 GCDPSHPIWNNLI 711



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 161/338 (47%), Gaps = 28/338 (8%)

Query: 341 GLVKLGRAVDGARVLMSM--------EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            ++K   +VD  R L+           + KF ++   Y+ L+  L +    ++  +++ +
Sbjct: 145 SMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTE 204

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+     PN    + +++   ++G   EA   + ++   G + ++FTY+SL+ G+  +  
Sbjct: 205 MLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNND 264

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            + A +++  M    C  NEV Y+ +IHGLCE G++ E   ++ +M    C P V  Y+ 
Sbjct: 265 VNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTV 324

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +IH L       E + LFNEM   E   +P+V TY ++++A+CK+  +  S  +LN MM+
Sbjct: 325 IIHALFGNDRNLEGMDLFNEMR--ERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMME 382

Query: 573 RGCDPDLVTCNIFLTALKE--KLEA--------------PQDGTDFLNELAIRLFKRQRT 616
           +G  P +VT N  +    E  ++EA              P + T   NEL     KR+  
Sbjct: 383 KGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERT--YNELICGFSKRKHV 440

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                ++  ML+  L+P   T+  ++   C+     +A
Sbjct: 441 HKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSA 478


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 154/459 (33%), Positives = 246/459 (53%), Gaps = 9/459 (1%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +D   C     +FN+++N   ++G   R  +    +       I PN +++N +++ +C+
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQG---RPGDCERLLETMAARGIQPNVVSYNGLLEGLCK 57

Query: 205 LGLVDNAIQLFREMPVRN--CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           L     A +L R+M  R     PD+ TY TL+ G CK  +++E+  LL E+   G  P  
Sbjct: 58  LERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDA 117

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           + +  ++  LCK+  LG A +L++ M   GC P  +T+NTLI G C + NL+ A SLL  
Sbjct: 118 LMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQT 177

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M AS    + VTY T+++GL K GR  +  ++L  M+      +   YS+ + GL K GK
Sbjct: 178 MAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK 237

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYS 441
             +A ++ +QM +    PN V Y+ ++DGLC+ GK D A E++ +M + +GC  N   YS
Sbjct: 238 VLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYS 297

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +++ G  + G+  +A  + + MA+  C  + V YS L++GLC+ GK+ EA     +M   
Sbjct: 298 TVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAME 357

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQS 558
           GCKP+ V Y S++HGLC+ G + EA ++  EM           P V TYN L+  LCK  
Sbjct: 358 GCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAG 417

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
            I  ++     M  +GCDPD V+ +  +  L     A Q
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQ 456



 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 158/446 (35%), Positives = 241/446 (54%), Gaps = 16/446 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   + K     +  RL  TM      +  V S+N +L  + +   +H A E    
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAAR-GIQPNVVSYNGLLEGLCKLERWHEAEELVRD 70

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++ ++     P+ +T++ ++   C+ G V+ + +L +E+  R   PD   Y  +M  LCK
Sbjct: 71  MI-SRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCK 129

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             RL EA+ LL+EM   GC PT +TFN LI+G C+   L  A  L+  M   G   + VT
Sbjct: 130 SARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVT 189

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTL+ GLC  G L +A  LL+RM AS C P+ V Y + + GL K G+ ++  +VL  M 
Sbjct: 190 YNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMR 249

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKP 418
           +     N   Y+T++ GL K GK + A+++ +QM    GC  N V YS ++DGLC++G+ 
Sbjct: 250 DSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRT 309

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA  ++  M   GC  +  TYSSL+ G  ++GK  +AVE  ++MA   C  N V Y  L
Sbjct: 310 QEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL 369

Query: 479 IHGLCEDGKLREARMVWTQMLSRG-----CKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +HGLC  G+L EA  +  +M S G     C P V  Y+++I GLC AG +++ALK F  M
Sbjct: 370 VHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRM 429

Query: 534 LCLEPKSQ---PDVFTYNILLNALCK 556
                +SQ   PD  +Y+ ++  L +
Sbjct: 430 -----RSQGCDPDGVSYSTIVEGLAR 450



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 207/456 (45%), Gaps = 61/456 (13%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   GC P  VTFN L+NG  K G  G   +L++ M  +G  PN V+YN L+ GLC    
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 313 LDKAVSLLDRMVA--SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             +A  L+  M++   +  P+ VTY T+++G  K G+  +   +L  +  R    +  +Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 371 S-----------------------------------TLISGLFKEGKAEDAMKLWKQMME 395
           +                                   TLISG  +E   E A  L + M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G K + V Y+ L+DGLC+ G+  EAE++L  M  +GCA +   YSS + G  +SGK   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSMI 514
           A ++ + M  ++   N V Y+ ++ GLC+ GK+  A  +  QM S  GC  +VV YS+++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GLC  G  +EA  +   M       +PDV TY+ L+N LCK   I  +++ +  M   G
Sbjct: 301 DGLCKLGRTQEARSVMEAM--ARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEG 358

Query: 575 CDPDLVT--------CNIFLTALKEKL------------EAPQDGTDFLNELAIRLFKRQ 614
           C P+ VT        C+    A  E++              P   + + N L   L K  
Sbjct: 359 CKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTY-NALIGGLCKAG 417

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
           R     K  + M  +   P   ++  +V+ L R  R
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 162/294 (55%), Gaps = 10/294 (3%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +E A  L  TM      K  V ++N++++ + + G    A +    +   K     P+ +
Sbjct: 168 LEMADSLLQTMAAS-GVKADVVTYNTLMDGLCKAGRLQEAEQLLERM---KASGCAPDVV 223

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            ++  +  +C+ G V NA Q+  +M   + +P++ TY T++DGLCK  ++D A+ ++++M
Sbjct: 224 AYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQM 283

Query: 254 -QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
              DGC    V ++ +++GLCK G    A  +++ M   GC P+ VTY++L++GLC  G 
Sbjct: 284 ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGK 343

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE----- 367
           +++AV  +  M    C PN VTY ++++GL   GR  +  R++  M       +      
Sbjct: 344 IEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSV 403

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
             Y+ LI GL K G+ +DA+K +++M  +GC P+ V YS +++GL R G+  +A
Sbjct: 404 STYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 142/273 (52%), Gaps = 14/273 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +L+     +G  +  E +L RM+       VV   SF++     GK   V  A ++ 
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGK---VLNAHQVL 245

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M D  H    V ++N++L+ + + G    ALE    + ++    +  N + ++ V+  
Sbjct: 246 EQMRDSDH-DPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGL--NVVGYSTVVDG 302

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+LG    A  +   M    C PD+ TY +L++GLCK  +++EAV  + EM ++GC P 
Sbjct: 303 LCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPN 362

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKG-----CLPNEVTYNTLIHGLCLKGNLDKA 316
            VT+  L++GLC  G L  A ++V+ M   G     C P+  TYN LI GLC  G +D A
Sbjct: 363 AVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDA 422

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
           +    RM +  C P+ V+Y TI+ GL + GRA+
Sbjct: 423 LKFFQRMRSQGCDPDGVSYSTIVEGLARSGRAL 455



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 21/192 (10%)

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +  C  N V ++ L++G  + G+  +   +   M +RG +P+VV+Y+ ++ GLC    
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
             EA +L  +M+    +S PD+ TY+ LL+  CK   +  S +LL  ++ RG  PD +  
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDAL-- 118

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                                 ++   L K  R     +++E M++    P   T+  ++
Sbjct: 119 -------------------MYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLI 159

Query: 643 QELCRPKRIQAA 654
              CR K ++ A
Sbjct: 160 SGCCREKNLEMA 171


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  259 bits (663), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/480 (31%), Positives = 252/480 (52%), Gaps = 26/480 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  +  +V ++     P+ + F+ ++  + ++   D  I L  +M       + YTY  
Sbjct: 65  AVALFGEMVKSRP---FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C+ ++L  A+ +L +M   G  P  VT + L+NG C +  +  A  LVD MF+ G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN VT+NTLIHGL L     +AV+L+DRMVA  C P+ VTYG ++NGL K G      
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  ME+ K      IY+T+I GL K    +DA+ L+K+M  KG +PN V YS+LI  L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+  +A  +L +MI      + FT+S+L+  F + GK  +A +++ +M K +   + 
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V YS LI+G C   +L EA+ ++  M+S+ C PDVV+YS++I G C A  V+E ++LF E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFRE 421

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   +     +  TY  L+  L +  +   + ++   M+  G  P+++T N  L      
Sbjct: 422 M--SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL------ 473

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                DG          L K  +      + E + +  + P   T+  +++ +C+  +++
Sbjct: 474 -----DG----------LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 224/429 (52%), Gaps = 11/429 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PNT+TFN +I  +        A+ L   M  + C+PD+ TY  +++GLCK    D A +L
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFIL 243

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L++M+     P  + +  +I+GLCKN  +  A  L   M  KG  PN VTY++LI  LC 
Sbjct: 244 LNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G    A  LL  M+  K  P+  T+  +I+  VK G+ V+  ++   M +R    +   
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS+LI+G     + ++A ++++ M+ K C P+ V YS LI G C+  + DE  E+  EM 
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMS 423

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   N  TY++L++G F++G    A EI+K+M  +    N + Y+ L+ GLC++GKL 
Sbjct: 424 QRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLE 483

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A +V+  +     +P +  Y+ MI G+C AG VE+   LF  +     K  PDV  YN 
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK--PDVVAYNT 541

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +++  C++ +   +  L   M + G  P+      + T ++ +L   +DG     E +  
Sbjct: 542 MISGFCRKGSKEEADALFKEMKEDGTLPN---SGCYNTLIRARL---RDGD---REASAE 592

Query: 610 LFKRQRTSG 618
           L K  R+ G
Sbjct: 593 LIKEMRSCG 601



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 213/463 (46%), Gaps = 53/463 (11%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D+A+ LF EM      P I  +  L+  + K N+ D  + L ++MQ  G      T+++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LIN  C+  +L  A  ++  M   G  PN VT ++L++G C    + +AV+L+D+M  + 
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN VT+                                   +TLI GLF   KA +A+
Sbjct: 182 YQPNTVTF-----------------------------------NTLIHGLFLHNKASEAV 206

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L  +M+ KGC+P+ V Y  +++GLC+ G  D A  +L +M           Y++++ G 
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGL 266

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            ++     A+ ++K+M       N V YS LI  LC  G+  +A  + + M+ R   PDV
Sbjct: 267 CKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
             +S++I      G + EA KL++EM  ++    P + TY+ L+N  C    +  +  + 
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFK 612
             M+ + C PD+V+ +  +     K +   +G +   E++ R               LF+
Sbjct: 385 EFMVSKHCFPDVVSYSTLIKGFC-KAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQ 443

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                   +I + M+   + P   T+  ++  LC+  +++ A+
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 178/375 (47%), Gaps = 17/375 (4%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA----KHMN-------------ILPNT 192
           CKR       +L   +++G     +  Y  I++     KHM+             I PN 
Sbjct: 232 CKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNV 291

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T++ +I  +C  G   +A +L  +M  R   PD++T+  L+D   KE +L EA  L DE
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M      P+ VT++ LING C +  L  A ++ + M  K C P+ V+Y+TLI G C    
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKR 411

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +D+ + L   M     + N VTY T+I GL + G       +   M       N   Y+T
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ GL K GK E AM +++ +     +P    Y+ +I+G+C+ GK ++  ++   +   G
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              +   Y++++ GF   G   +A  ++K+M ++  + N  CY+ LI     DG    + 
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASA 591

Query: 493 MVWTQMLSRGCKPDV 507
            +  +M S G   D 
Sbjct: 592 ELIKEMRSCGFAGDA 606



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 23/240 (9%)

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K D+A  +  EM+ +    +   +S L+    +  K    + + + M      +N   YS
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +LI+  C   +L  A  V  +M+  G +P++V  SS+++G C++  + EA+ L ++M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV- 179

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
               QP+  T+N L++ L   +  S ++ L++ M+ +GC PDLVT  + +  L       
Sbjct: 180 -TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGL------- 231

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                          KR  T   F ++  M Q  L P    +  ++  LC+ K +  A+N
Sbjct: 232 --------------CKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALN 277


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 270/536 (50%), Gaps = 32/536 (5%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           +++  +   + +A+ +++A+ LF  ++  + CK    ++ +++  +        A  F++
Sbjct: 300 QTYNILVAGFSRANRLDDALELFK-LLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD 358

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
             ++          +++  VIK +     +D A +LF ++    C P++  Y  ++DGL 
Sbjct: 359 EALD---------VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLL 409

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K  R+++ +   ++M    C PT  T+ V+I+GLCK   L  A K+ + M  KGC+P+ +
Sbjct: 410 KAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTI 469

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY TLI G      +D+A  LLD M+     P  VTYG+I++G  KL    +   V+  M
Sbjct: 470 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 529

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            ER      +I+++L+S    +G+AE+A ++  +M  +GC P+ ++Y++LID L   G+ 
Sbjct: 530 RERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRV 589

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA  +   MI  GCA +A TY ++++ F + G    A EI + MAK+    +   Y+ L
Sbjct: 590 PEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSL 649

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           + G  +  ++ +A  V+ +M++ G KP+ V ++ ++HGL   G  + A  LF EML  + 
Sbjct: 650 MDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML-EKD 708

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
           +  P + +Y IL++ L K   +S +      M+DRG  P+   C+ + +           
Sbjct: 709 EVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPE---CHTYTS----------- 754

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  L   L K  R     K+VE M++  ++P    +  ++  L     +  A
Sbjct: 755 -------LIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTA 803



 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 162/600 (27%), Positives = 277/600 (46%), Gaps = 79/600 (13%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN------- 182
           KA  +++AI LF  M     C+ T+ S+N+V++ +        A +F+N +++       
Sbjct: 32  KARKIDKAIELFLEM-PSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDV 90

Query: 183 -----------------AKHM-------NILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
                              HM          P+   +  VI   C+ G +D   ++  EM
Sbjct: 91  IAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEM 150

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
               C PD   Y  L+D LCK  R+DEA  L + M+  GC    VTF  LI  L  +G+L
Sbjct: 151 LAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKL 210

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A +L   M  +G  P     ++LI  LC  G +D+A  +   +VA K   + V Y ++
Sbjct: 211 DEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSL 270

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           ++G  KLGR  DG ++L+ M E     +   Y+ L++G  +  + +DA++L+K +   GC
Sbjct: 271 MDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGC 330

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEI----------------------------LFEMIN 430
           KPN   Y+ +I GL    + +EA+                              LFE + 
Sbjct: 331 KPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRIDEACELFEKLK 390

Query: 431 N-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             GC+ N   Y++++ G  ++G+    ++ ++DM+ ++CV     Y+V+I GLC+   L 
Sbjct: 391 TAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLP 450

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  V+ QM+ +GC PD + Y+++I G   A  ++EA KL + ML   P  +P   TY  
Sbjct: 451 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP--EPTAVTYGS 508

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +++  CK   I+ + +++  M +RGC+P L      L+    K  A ++    L E+  R
Sbjct: 509 IVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA-EEAYQVLTEMTAR 567

Query: 610 ---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                          LF   R      + + M++K  +P   T+  ++Q   +   ++AA
Sbjct: 568 GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAA 627



 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 260/511 (50%), Gaps = 17/511 (3%)

Query: 86  FYSLIQHYA---NSGDFKSLEMVLYRMRR--EKRVVLEK-----SFIFIFKAYGKAHLVE 135
            + L+  Y    N+  + ++   LY  +R  E +   ++     S+  + K    +  ++
Sbjct: 321 LFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADSKRID 380

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA  LF  +     C   V ++ +V++ +++ G     L+ +  +  +   + +P   T+
Sbjct: 381 EACELFEKL-KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGS---SCVPTRTTY 436

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
            +VI  +C+  ++ +A ++F +M  + C PD  TY TL+DG  K +++DEA  LLD M  
Sbjct: 437 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 496

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  PT VT+  +++G CK   +  A +++  M  +GC P    + +L+     KG  ++
Sbjct: 497 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 556

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +L  M A  C P+ + Y ++I+ L   GR  +   V  SM E+    +   Y T+I 
Sbjct: 557 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 616

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              K G  E A ++ + M + G  P+   Y++L+DG  ++ + D+A  +   M+ +G   
Sbjct: 617 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 676

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDM-AKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
           NA T++ LM G F+ GK  +A  ++K+M  K+      V Y++LI GL + G++ EA   
Sbjct: 677 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQ 736

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           + +M+ RG  P+   Y+S+I+ L  AG + EA KL  +M+ L     PDV  Y+ L+  L
Sbjct: 737 FQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL--GVNPDVQAYSALITGL 794

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
              S +  + D+   MM RGC P+ VT  + 
Sbjct: 795 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 236/469 (50%), Gaps = 32/469 (6%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            ++P+ +  N+V+  +C+   +D AI+LF EMP   CEP I +Y T++ GL   +++DEA
Sbjct: 15  GLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEA 74

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
               + M  +GC P  + F  LI+G CK G+  +   ++ N  LK   P+   Y ++IHG
Sbjct: 75  YKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRFRPDVFLYTSVIHG 133

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C  G+LD    +L+ M+A+ C+P+   Y  +I+ L KLGR VD A  L     +   + 
Sbjct: 134 YCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGR-VDEAYELFERMRKSGCLG 192

Query: 367 EYI-YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +Y+ + TLI  L   GK ++A +L+++M+E+G +P   V  +LI  LC+ GK DEA EI 
Sbjct: 193 DYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIY 252

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             ++    A +   Y+SLM G+ + G+    +++   M + +   +   Y++L+ G    
Sbjct: 253 QTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRA 312

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            +L +A  ++  + S GCKP+   Y+++I GL +A  +EEA   F+E L        DV 
Sbjct: 313 NRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL--------DVI 364

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           +Y  ++  L     I  + +L   +   GC P++V     +           DG      
Sbjct: 365 SYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVI-----------DG------ 407

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               L K  R   G K  E M      P  +T+  V+  LC+ + +  A
Sbjct: 408 ----LLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDA 452



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 168/618 (27%), Positives = 277/618 (44%), Gaps = 54/618 (8%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + S+I  Y  +GD  +   +L  M     +    ++  +     K   V+EA  LF  M 
Sbjct: 127 YTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERM- 185

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP--NTLTFNLVIKTVC 203
            +  C     +F +++  +   G    A E Y  ++   +   L   ++L F L     C
Sbjct: 186 RKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL-----C 240

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G VD A ++++ +  +        Y +LMDG CK  R+D+ + LL +M     FP   
Sbjct: 241 KAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQ 300

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL---------------- 307
           T+N+L+ G  +   L  A +L   +   GC PN  TY T+I GL                
Sbjct: 301 TYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA 360

Query: 308 --------CLKG-----NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
                    +KG      +D+A  L +++  + C PN V Y  +I+GL+K GR  DG + 
Sbjct: 361 LDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN 420

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M           Y+ +I GL K     DA K+++QM++KGC P+T+ Y+ LIDG  +
Sbjct: 421 FEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 480

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
             K DEA ++L  M+  G    A TY S++ GF +    ++A E+   M +  C      
Sbjct: 481 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 540

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           ++ L+      G+  EA  V T+M +RGC PDV+ Y+S+I  L + G V EA  +F+ M 
Sbjct: 541 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM- 599

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK--EK 592
            +E    PD  TY  ++    K  N+  + ++L  M   G  PD    N  +      E+
Sbjct: 600 -IEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLER 658

Query: 593 LEAPQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVMLQKFLSPQT-STWE 639
           ++      D +    I+            LFK  +T   F + + ML+K   P T  ++ 
Sbjct: 659 VDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYT 718

Query: 640 RVVQELCRPKRIQAAINK 657
            ++  L +  R+  A ++
Sbjct: 719 ILIDGLGKAGRVSEAFSQ 736



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 212/425 (49%), Gaps = 8/425 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +     KA ++ +A ++F  MV +  C     ++ ++++   +      A +  + 
Sbjct: 435 TYTVVIDGLCKAQMLPDACKVFEQMVQK-GCVPDTITYTTLIDGFSKASKMDEARKLLDV 493

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++        P  +T+  ++   C+L +++ A ++  +M  R CEP ++ + +L+     
Sbjct: 494 MLTKGPE---PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 550

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           + R +EA  +L EM   GC P  + +  LI+ L   G +  A  + D+M  KGC P+ +T
Sbjct: 551 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 610

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y T+I      GN++ A  +L+ M  S   P+   Y ++++G VKL R      V   M 
Sbjct: 611 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 670

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV-YSALIDGLCRVGKP 418
                 N   ++ L+ GLFK+GK + A  L+K+M+EK   P T+V Y+ LIDGL + G+ 
Sbjct: 671 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRV 730

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA     EMI+ G      TY+SL+    ++G+  +A ++ +DM K     +   YS L
Sbjct: 731 SEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 790

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG---SVEEALKLFNEMLC 535
           I GL +   +  A  V+ +M+ RGC P+ V Y  +  G   AG    +E   + F++ + 
Sbjct: 791 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGVA 850

Query: 536 LEPKS 540
           +E  S
Sbjct: 851 MEAGS 855



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 170/370 (45%), Gaps = 5/370 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  ++ +        +L  M  +       ++  I   + K  ++ EA  +   M
Sbjct: 470 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 529

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E  C+  +  F S+L+  + +G   RA E Y  +         P+ + +  +I  +  
Sbjct: 530 -RERGCEPGLFIFTSLLSYYLSKG---RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 585

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A  +F  M  + C PD  TY T++    K   ++ A  +L+ M   G  P    
Sbjct: 586 TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFA 645

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++G  K   + +A  + D M   G  PN VT+N L+HGL   G  D+A SL   M+
Sbjct: 646 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML 705

Query: 325 -ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              +  P  V+Y  +I+GL K GR  +       M +R      + Y++LI  L K G+ 
Sbjct: 706 EKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRI 765

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +A KL + M++ G  P+   YSALI GL      D A ++  EM+  GCA N  TY  L
Sbjct: 766 PEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 825

Query: 444 MKGFFESGKG 453
            +GF  +G+ 
Sbjct: 826 RRGFRAAGRA 835


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 266/508 (52%), Gaps = 31/508 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ ++ ++    LP+ + F  ++  V R+   D  I L+++M  +    DIY++  
Sbjct: 63  AIDLFSDMLRSRP---LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  ++L  A+    ++   G  P  VTFN L++GLC    +  A  L   MF   
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN VT+ TL++GLC +G + +AV+LLDRM+     P ++TYGTI++G+ K+G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSAL 239

Query: 353 RVLMSMEERKFHV-NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +L  MEE    + N  IYS +I  L K+G+  DA  L+ +M EKG  P+   Y+++I G
Sbjct: 240 DLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C  G+  +AE++L EM+    + +  TY++L+  F + GK  +A E++ +M     + N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + YS +I G C+  +L  A  ++  M ++GC P+++ ++++I G C A  +++ ++L +
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
           EM   E     D  TYN L++      +++ ++DLL  M+  G  PD+VTC+  L  L  
Sbjct: 420 EM--TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 590 -----------------KEKLEA--PQDGTD----FLNELAIRLFKRQRTSGGFKIVEVM 626
                            K+ L+A  P +G +      N L   L    +     ++ E M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + + P T T+  ++  LC+  R+  A
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 248/506 (49%), Gaps = 49/506 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG-------LYHRALE--------FYN 178
           V EA+ LFH M  E  C+  V +F +++N + +EG       L  R +E         Y 
Sbjct: 165 VSEALNLFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 179 HIVNA------------------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
            IV+                   +  +I+PN + ++ +I ++C+ G   +A  LF EM  
Sbjct: 224 TIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +   PD++TY +++ G C   R  +A  LL EM      P  VT+N LIN   K G+   
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A +L D M  +G +PN +TY+++I G C +  LD A  +   M    C PN +T+ T+I+
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G     R  DG  +L  M E     +   Y+TLI G +  G    A+ L ++M+  G  P
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMIN------------NGCAANAFTYSSLMKGFF 448
           + V    L+DGLC  GK  +A E +F+++             NG   +  TY+ L+ G  
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             GK  +A E++++M     V + + YS +I GLC+  +L EA  ++  M S+   P+VV
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            ++++I+G C AG V++ L+LF EM         +  TY  L+    K  NI+ ++D+  
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEM--GRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLE 594
            M+  G  PD +T    LT L  K E
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEE 666



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++NS++      G +  A +    ++  K   I P+ +T+N +I    + G    A +L+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  R   P+  TY +++DG CK+NRLD A  +   M   GC P  +TFN LI+G C  
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +    +L+  M   G + +  TYNTLIHG  L G+L+ A+ LL  M++S   P+ VT 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNE-----------YIYSTLISGLFKEGKAE 384
            T+++GL   G+  D   +   M++ K  ++              Y+ LISGL  EGK  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +L+++M  +G  P+T+ YS++IDGLC+  + DEA ++   M +   + N  T+++L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+ ++G+    +E++ +M +   V N + Y  LI G  + G +  A  ++ +M+S G  
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           PD +   +M+ GL +   ++ A+ +  ++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 201/440 (45%), Gaps = 21/440 (4%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L  G  +   L++A+ L  +M      P+ V F  L+  + +         L   M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              +  ++  LI   C    L  A+S   ++      P+ VT+ T+++GL    R  +  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M E     N   ++TL++GL +EG+  +A+ L  +MME G +P  + Y  ++DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 413 CRVGKPDEAEEILFEMIN-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           C++G    A ++L +M   +    N   YS+++    + G+   A  ++ +M +     +
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y+ +I G C  G+  +A  +  +ML R   PDVV Y+++I+     G   EA +L++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 532 EMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           EML   P+   P+  TY+ +++  CKQ+ +  +  +   M  +GC P+L+T N  +    
Sbjct: 350 EML---PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTS-----GGFKIV----------EVMLQKFLSPQT 635
              +   DG + L+E+         T+      GF +V          + M+   L P  
Sbjct: 407 GA-KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465

Query: 636 STWERVVQELCRPKRIQAAI 655
            T + ++  LC   +++ A+
Sbjct: 466 VTCDTLLDGLCDNGKLKDAL 485



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 3/173 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V+++N +++ +I EG +  A E Y  +    H  I+P+T+T++ +I  +C+   +D A Q
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEM---PHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F  M  ++  P++ T+ TL++G CK  R+D+ + L  EM   G     +T+  LI G  
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           K G +  A  +   M   G  P+ +T   ++ GL  K  L +AV++L+++  S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 152/467 (32%), Positives = 243/467 (52%), Gaps = 4/467 (0%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S +  FK     H    +I  + TM       + +    S+L  ++     + A   +  
Sbjct: 85  SLLSFFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTS 144

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++ A+  +   + L F++++      G   +AIQ FR +   N +   ++   L D L K
Sbjct: 145 VLEARGTH--QSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMK 202

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            N    A    +E+   G  P    FNVL++ LCK  ++  A  L   +  +G  P  V+
Sbjct: 203 LNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVS 262

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +NTLI+G C  GNLD+   L   M+ ++  P+  TY  +INGL K G+  D  ++ + M 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R    N+  ++TLI+G    G+A+  M++++QM+ KG KP+ + Y+ LI+GLC+VG   
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA++++ EM   G   + FTY+ L+ G  + G    A+EI K+M K     + V ++ LI
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G C +G++ EA     +ML  G KPD   Y+ +IHG C  G V+   KL  EM C    
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQC--DG 500

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             P V TYN+LLN LCKQ  + ++  LL++M++ G  PD +T NI L
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 194/414 (46%), Gaps = 4/414 (0%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           +  +F S  +       +  F  L+  Y +SG F         +R+    +   S  ++F
Sbjct: 138 ASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLF 197

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
               K +L   A   +  ++D  +     K FN +++ + +E   + A   +  I     
Sbjct: 198 DRLMKLNLTSPAWAFYEEILDCGYPPDVCK-FNVLMHRLCKEHKINEAQLLFGEI---GK 253

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             + P  ++FN +I   C+ G +D   +L R M      PD++TY  L++GLCKE +LD+
Sbjct: 254 RGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDD 313

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  L  EM   G  P  VTF  LING C  G      ++   M  KG  P+ +TYNTLI+
Sbjct: 314 ANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLIN 373

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  G+L +A  L+  M      P++ TY  +I+G  K G       +   M +    +
Sbjct: 374 GLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIEL 433

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   ++ LISG  +EG+  +A +  ++M+E G KP+   Y+ +I G C+ G      ++L
Sbjct: 434 DNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLL 493

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            EM  +G      TY+ L+ G  + G+   A  +   M     V +++ Y++L+
Sbjct: 494 KEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/323 (30%), Positives = 169/323 (52%), Gaps = 4/323 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K H + EA  LF   + +   + TV SFN+++N   + G   +       ++  +   + 
Sbjct: 237 KEHKINEAQLLFGE-IGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENR---VF 292

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  T++++I  +C+ G +D+A +LF EM  R   P+  T+ TL++G C   R D  + +
Sbjct: 293 PDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEI 352

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             +M   G  P  +T+N LINGLCK G+L  A KLV  M  +G  P++ TY  LI G C 
Sbjct: 353 YQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCK 412

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G+L+ A+ +   MV      + V +  +I+G  + G+ ++  R L  M E     ++  
Sbjct: 413 EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDAT 472

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ +I G  K+G  +   KL K+M   G  P  V Y+ L++GLC+ G+   A  +L  M+
Sbjct: 473 YTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAML 532

Query: 430 NNGCAANAFTYSSLMKGFFESGK 452
           N G   +  TY+ L++   ++ K
Sbjct: 533 NLGVVPDDITYNILLERTLQAWK 555



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/371 (22%), Positives = 157/371 (42%), Gaps = 69/371 (18%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           +Y T+ H LC    L +A SLL  +V+ K                  G+    +     +
Sbjct: 105 SYCTMTHFLCTHKMLSEAQSLLQFVVSRK------------------GKNSASSVFTSVL 146

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E R  H +  ++S L++     G   DA++ ++ + +   +        L D L ++   
Sbjct: 147 EARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLT 206

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             A     E+++ G   +                               C +N     VL
Sbjct: 207 SPAWAFYEEILDCGYPPDV------------------------------CKFN-----VL 231

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           +H LC++ K+ EA++++ ++  RG +P VV+++++I+G C +G++++  +L   M+  E 
Sbjct: 232 MHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMM--EN 289

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA---------- 588
           +  PDVFTY++L+N LCK+  +  +  L   M DRG  P+ VT    +            
Sbjct: 290 RVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLG 349

Query: 589 --LKEKLEAPQDGTDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
             + +++       D +  N L   L K        K+V  M Q+ L P   T+  ++  
Sbjct: 350 MEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDG 409

Query: 645 LCRPKRIQAAI 655
            C+   +++A+
Sbjct: 410 CCKEGDLESAL 420


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 158/512 (30%), Positives = 265/512 (51%), Gaps = 51/512 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++AI LF  MV        V+ FN +L+ I +   +   +     + N   + I  +  
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVE-FNKLLSAIAKMKKFDLVISLGERMQN---LRISYDLY 116

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N++I   CR   +  A+ +  +M     EPDI T  +L++G C   R+ +AV L+D+M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY------------- 300
              G  P  VTFN LI+GL  + +   A  LVD M  +GC P+ VTY             
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDI 236

Query: 301 ----------------------NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
                                 NT+I GLC   ++D A +L ++M      P+  TY ++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL 296

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+ L   GR  D +R+L +M ERK + N   +S LI    KEGK  +A KL+ +M+++  
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+   YS+LI+G C   + DEA+ +   MI+  C  N  TY++L+KGF ++ +  + +E
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++++M++   V N V Y+ LI GL + G    A+ ++ +M+S G  PD++ YS ++ GLC
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E+AL +F  +   + K +PD++TYNI++  +CK   +    DL  S+  +G  P+
Sbjct: 477 KYGKLEKALVVFEYL--QKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534

Query: 579 LVTCNIFLT-----ALKEKLEA-----PQDGT 600
           ++     ++      LKE+ +A      +DGT
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGT 566



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 150/497 (30%), Positives = 254/497 (51%), Gaps = 31/497 (6%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S N++LN+ + +     A+  +  +V ++    LP+ + FN ++  + ++   D  I L 
Sbjct: 52  SRNALLNLKLDD-----AIGLFGEMVQSRP---LPSIVEFNKLLSAIAKMKKFDLVISLG 103

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             M       D+Y+Y  L++  C+ ++L  A+ +L +M   G  P  VT + L+NG C +
Sbjct: 104 ERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHS 163

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +  A  LVD M   G  P+ VT+NTLIHGL L     +AV+L+D+MV   C P+ VTY
Sbjct: 164 KRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 223

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
           G ++NGL K G       +L  ME+ K   +  IY+T+I GL K    +DA  L+ +M  
Sbjct: 224 GAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMET 283

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KG +P+   Y++LI  LC  G+  +A  +L  MI      N  T+S+L+  F + GK  +
Sbjct: 284 KGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVE 343

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A +++ +M K +   +   YS LI+G C   +L EA+ ++  M+S+ C P+VV Y+++I 
Sbjct: 344 AEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G C A  VEE ++LF EM   +     +  TYN L+  L +  +   +  +   M+  G 
Sbjct: 404 GFCKAKRVEEGMELFREM--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            PD++T +I L           DG          L K  +      + E + +  + P  
Sbjct: 462 PPDIITYSILL-----------DG----------LCKYGKLEKALVVFEYLQKSKMEPDI 500

Query: 636 STWERVVQELCRPKRIQ 652
            T+  +++ +C+  +++
Sbjct: 501 YTYNIMIEGMCKAGKVE 517



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 140/468 (29%), Positives = 245/468 (52%), Gaps = 6/468 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y  +  + +A+ L   MV+  +   TV +FN++++ +    L+++A E    +   
Sbjct: 156 LLNGYCHSKRISDAVALVDQMVEMGYKPDTV-TFNTLIHGLF---LHNKASEAVALVDQM 211

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P+ +T+  V+  +C+ G +D A+ L ++M     E D+  Y T++DGLCK   +
Sbjct: 212 VQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHI 271

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A  L ++M+  G  P   T+N LI+ LC  G    A++L+ NM  +   PN VT++ L
Sbjct: 272 DDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSAL 331

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I     +G L +A  L D M+     P+  TY ++ING     R  +   +   M  +  
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   Y+TLI G  K  + E+ M+L+++M ++G   NTV Y+ LI GL + G  D A++
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           I  +M+++G   +  TYS L+ G  + GK  KA+ +++ + K+    +   Y+++I G+C
Sbjct: 452 IFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMC 511

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK+ +   ++  +  +G KP+V+ Y++MI G C  G  EEA  LF EM   E  + PD
Sbjct: 512 KAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK--EDGTLPD 569

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
              YN L+ A  +  + + S +L+  M   G   D  T ++ +  L +
Sbjct: 570 SGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHD 617



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 233/477 (48%), Gaps = 11/477 (2%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANS---GDFKSLEMVLYRMRREKRVV 116
           +S+ P +  +     KLG Y+    T  SL+  Y +S    D  +L   +  M  +   V
Sbjct: 128 RSQLPLALAVLGKMMKLG-YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTV 186

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
              + I     + KA    EA+ L   MV    C+  + ++ +V+N + + G    AL  
Sbjct: 187 TFNTLIHGLFLHNKA---SEAVALVDQMVQR-GCQPDLVTYGAVVNGLCKRGDIDLALSL 242

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
              +   K   I  + + +N +I  +C+   +D+A  LF +M  +   PD++TY +L+  
Sbjct: 243 LKKMEKGK---IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC   R  +A  LL  M      P  VTF+ LI+   K G+L  A KL D M  +   P+
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             TY++LI+G C+   LD+A  + + M++  C PN VTY T+I G  K  R  +G  +  
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +R    N   Y+TLI GLF+ G  + A K++K+M+  G  P+ + YS L+DGLC+ G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K ++A  +   +  +    + +TY+ +++G  ++GK     +++  ++      N + Y+
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +I G C  G   EA  ++ +M   G  PD   Y+++I      G    + +L  EM
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEM 596



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 220/419 (52%), Gaps = 14/419 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF---IFKAYGKAHLVEEAIRLF 141
           T+ +++      GD   +++ L  +++ ++  +E   +    I     K   +++A  LF
Sbjct: 222 TYGAVVNGLCKRGD---IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALF 278

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           + M +    +  V ++NS+++ +   G +  A    ++++  K   I PN +TF+ +I  
Sbjct: 279 NKM-ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERK---INPNVVTFSALIDA 334

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G +  A +L+ EM  R+ +PDI+TY +L++G C  +RLDEA  + + M    CFP 
Sbjct: 335 FVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+N LI G CK   +    +L   M  +G + N VTYNTLI GL   G+ D A  +  
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +MV+    P+ +TY  +++GL K G+      V   +++ K   + Y Y+ +I G+ K G
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K ED   L+  +  KG KPN ++Y+ +I G CR G  +EA+ +  EM  +G   ++  Y+
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYN 574

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +L++     G    + E+ K+M     V +    S++I+ L  DG+L ++   + +MLS
Sbjct: 575 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS---YLEMLS 629



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 16/184 (8%)

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           KL +A  ++ +M+     P +V ++ ++  +      +  + L   M  L  +   D+++
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNL--RISYDLYS 117

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL------------TALKEKL- 593
           YNIL+N  C++S +  ++ +L  MM  G +PD+VT +  L             AL +++ 
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 594 -EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
               +  T   N L   LF   + S    +V+ M+Q+   P   T+  VV  LC+   I 
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 653 AAIN 656
            A++
Sbjct: 238 LALS 241


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 139/403 (34%), Positives = 234/403 (58%), Gaps = 2/403 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PNT+TF+ +I  +C  G V  A++L   M     +PD+ T  TL++GLC   +  EA+LL
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           +D+M   GC P  VT+  ++N +CK+G+   A +L+  M  +    + V Y+ +I GLC 
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+LD A +L + M       N +TY  +I G    GR  DGA++L  M +RK + N   
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S LI    KEGK  +A +L K+M+ +G  P+T+ Y++LIDG C+    D+A +++  M+
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + GC  N  T++ L+ G+ ++ +    +E+++ M+    V + V Y+ LI G CE GKL 
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A+ ++ +M+SR   P++V Y  ++ GLC+ G  E+AL++F ++   + K + D+  YNI
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI--EKSKMELDIGIYNI 513

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +++ +C  S +  + DL  S+  +G  P + T NI +  L +K
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/425 (30%), Positives = 224/425 (52%), Gaps = 5/425 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ +  ++   H   LP  + F+ +   + +    D  + L ++M ++    ++YT   
Sbjct: 72  AIDLFRDMI---HSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++  C+  +L  A   + ++   G  P  +TF+ LINGLC  G +  A +LVD M   G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ +T NTL++GLCL G   +A+ L+D+MV   C PN VTYG ++N + K G+     
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  MEER   ++   YS +I GL K G  ++A  L+ +M  KG   N + Y+ LI G 
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+ D+  ++L +MI      N  T+S L+  F + GK  +A E+ K+M       + 
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           + Y+ LI G C++  L +A  +   M+S+GC P++  ++ +I+G C A  +++ L+LF +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M         D  TYN L+   C+   ++ + +L   M+ R   P++VT  I L  L + 
Sbjct: 429 MSL--RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486

Query: 593 LEAPQ 597
            E+ +
Sbjct: 487 GESEK 491



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 236/458 (51%), Gaps = 6/458 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ L   MV+  H K  + + N+++N +   G    A+   + +V        PN +
Sbjct: 174 VSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMV---EYGCQPNAV 229

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  V+  +C+ G    A++L R+M  RN + D   Y  ++DGLCK   LD A  L +EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           ++ G     +T+N+LI G C  G     AKL+ +M  +   PN VT++ LI     +G L
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L   M+     P+ +TY ++I+G  K        +++  M  +    N   ++ L
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G  K  + +D ++L+++M  +G   +TV Y+ LI G C +GK + A+E+  EM++   
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  TY  L+ G  ++G+  KA+EI++ + K+    +   Y+++IHG+C   K+ +A  
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  +  +G KP V  Y+ MI GLC  G + EA  LF +M   E    PD +TYNIL+ A
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM--EEDGHAPDGWTYNILIRA 587

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
                + + S+ L+  +   G   D  T  + +  L +
Sbjct: 588 HLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/418 (31%), Positives = 213/418 (50%), Gaps = 18/418 (4%)

Query: 190 PNTLTF------------NLVIKTVCRLGLVD----NAIQLFREMPVRNCEPDIYTYCTL 233
           PN L+F            NL  +   R GLVD    +AI LFR+M      P +  +  L
Sbjct: 35  PNELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRL 94

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
              + K  + D  + L  +M++ G      T +++IN  C+  +L  A   +  +   G 
Sbjct: 95  FSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY 154

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            PN +T++TLI+GLCL+G + +A+ L+DRMV     P+ +T  T++NGL   G+  +   
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           ++  M E     N   Y  +++ + K G+   AM+L ++M E+  K + V YS +IDGLC
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           + G  D A  +  EM   G   N  TY+ L+ GF  +G+     ++ +DM K     N V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +SVLI    ++GKLREA  +  +M+ RG  PD + Y+S+I G C    +++A ++ + M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
             +     P++ T+NIL+N  CK + I   ++L   M  RG   D VT N  +    E
Sbjct: 395 --VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 158/342 (46%), Gaps = 25/342 (7%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A+ L   M+ S+ +P  + +  + + + K  +      +   ME +    N Y  S +
Sbjct: 70  DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+   +  K   A     ++++ G +PNT+ +S LI+GLC  G+  EA E++  M+  G 
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  T ++L+ G   SGK  +A+ +   M +  C  N V Y  +++ +C+ G+   A  
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           +  +M  R  K D V YS +I GLC  GS++ A  LFNEM   E K    ++ TYNIL+ 
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITYNILIG 306

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             C          LL  M+ R  +P++VT ++ + +             F+ E  +R  +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS-------------FVKEGKLREAE 353

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                        M+ + ++P T T+  ++   C+   +  A
Sbjct: 354 ELHKE--------MIHRGIAPDTITYTSLIDGFCKENHLDKA 387


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 249/484 (51%), Gaps = 35/484 (7%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+ L   +   F  + + +S+N VL+V+ +   +  AL  Y  +V+     + P T TF 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDR--VPPTTFTFG 179

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           +  + +CRLG  + A+ L R M    C PD   Y T++  LC +  + EA  LL+EM + 
Sbjct: 180 VAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLM 239

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC-------- 308
           GC     TF+ ++ G+C  G +  AA+LVD M  KGC+P  +TY  L+ GLC        
Sbjct: 240 GCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA 299

Query: 309 -----------------------LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
                                   +G L +A  L + M    C P+  TY  +++GL KL
Sbjct: 300 RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKL 359

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           GR     R+L  ME++ F  N   Y+ ++    K G  +D   L ++M  KG   N+  Y
Sbjct: 360 GRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGY 419

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + +I  LC+ G+ DEA  ++ EM + GC  +  +Y++++     + +  +A  +++++ +
Sbjct: 420 NGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLE 479

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
              V N + Y+ +IH L  DG+ ++A  +  +M+  GC  DVV+Y+ +I  +C  G+V+ 
Sbjct: 480 EGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDR 539

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           +L L  EM   E   +P+  +YNIL++ LCK+  +  +++L   M+++G  PD+VT N  
Sbjct: 540 SLVLLEEM--AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTL 597

Query: 586 LTAL 589
           +  L
Sbjct: 598 INGL 601



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 145/522 (27%), Positives = 246/522 (47%), Gaps = 39/522 (7%)

Query: 87  YSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHL--VEEAIRLFHTM 144
           Y+++       D  +  + LYR    +  V   +F F   A     L    EA+ L   M
Sbjct: 142 YNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLRGM 201

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                C      + +V++ +  +G    A    N ++    M    +  TF+ V++ +C 
Sbjct: 202 A-RHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEML---LMGCAADVNTFDDVVRGMCG 257

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK------------------------- 239
           LG V  A +L   M  + C P + TY  L+ GLC+                         
Sbjct: 258 LGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTV 317

Query: 240 ------ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
                 E +L EA  L + M + GC P   T+++L++GLCK G +  A +L+  M  KG 
Sbjct: 318 IGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGF 377

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            PN VTY  ++H  C  G  D   +LL+ M A     N   Y  +I  L K GR  +   
Sbjct: 378 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMG 437

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           ++  M  +  + +   Y+T+I  L    + E+A  +++ ++E+G   N + Y+ +I  L 
Sbjct: 438 LIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALL 497

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           R G+  +A  +  EMI +GC+ +  +Y+ L+K   + G   +++ + ++MA+     N V
Sbjct: 498 RDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV 557

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y++LI  LC++ ++R+A  +  QML++G  PD+V Y+++I+GLC  G +  AL L  ++
Sbjct: 558 SYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 617

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
                   PD+ TYNIL++  CK   +  +  LLN  M   C
Sbjct: 618 --HNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMAAVC 657


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  259 bits (661), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 155/507 (30%), Positives = 256/507 (50%), Gaps = 31/507 (6%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TVK+   +L+ +++       LE    +       + P+   F+  I   C+ G V++AI
Sbjct: 278 TVKTCTFLLSSLVKA----NELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAI 333

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           QLF +M      P++ TY  L+ GLCK   LDEA    ++M  DG   T +T++VLINGL
Sbjct: 334 QLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGL 393

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            K  +   A  ++     KG  PNEV YNTLI G C  GNL  A+ +   MV+    PN 
Sbjct: 394 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 453

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VT  +II G  K+G+      +L  M  R F +N   ++T+I  L    + E A++  ++
Sbjct: 454 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 513

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +  +PN  + + L+ GLC+ GK  +A E+ F ++  G  AN  T ++L+ G  ++G 
Sbjct: 514 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 573

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +AV + K M +   V +++ Y+ LI G C++GK+ E   +  +M+ +G +PD   Y+ 
Sbjct: 574 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNL 633

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +IHG+C  G ++EA+ L+NE  C      P+V+TY ++++  CK   I     L   ++ 
Sbjct: 634 LIHGMCRIGKLDEAVNLWNE--CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 691

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ-RTSGGFKIVEVMLQKFL 631
           +  + + V  N                        IR + R   T   FK+ + M  K +
Sbjct: 692 QNLELNSVVYNTL----------------------IRAYCRNGNTVEAFKLHDDMRSKGI 729

Query: 632 SPQTSTWERVVQELCRPKRIQAAINKC 658
            P T+T+  ++  +C   R++ A  KC
Sbjct: 730 PPTTATYSSLIHGMCNIGRMEDA--KC 754



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/558 (27%), Positives = 261/558 (46%), Gaps = 56/558 (10%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------- 176
           A+ K   VE+AI+LF  M ++      V ++N++++ + + G    A  F          
Sbjct: 322 AFCKGGKVEDAIQLFFDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVN 380

Query: 177 -----YNHIVNAK-----------------HMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
                Y+ ++N                        PN + +N +I   C++G + +A+++
Sbjct: 381 ATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRI 440

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
             +M  +   P+  T  +++ G CK  ++++A  +L+EM   G    P  F  +I+ LC 
Sbjct: 441 RGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCM 500

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
           N     A + +  M L+   PN+    TL+ GLC +G    AV L  R++      N VT
Sbjct: 501 NSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVT 560

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
              +I+GL K G   +  R+L  M ER F +++  Y+TLISG  KEGK E+  KL  +M+
Sbjct: 561 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 620

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           ++G +P+T  Y+ LI G+CR+GK DEA  +  E  +     N +TY  ++ G+ ++ K  
Sbjct: 621 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIE 680

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +  +++ ++   N   N V Y+ LI   C +G   EA  +   M S+G  P    YSS+I
Sbjct: 681 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 740

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           HG+CN G +E+A  L +EM   +    P+V  Y  L+   CK   +   +++L  M    
Sbjct: 741 HGMCNIGRMEDAKCLIDEM--RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 798

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             P+ +T  + +           DG            K        K++  M+ K + P 
Sbjct: 799 IHPNKITYTVMI-----------DGYS----------KSGDMKTAAKLLHEMVGKGIVPD 837

Query: 635 TSTWERVVQELCRPKRIQ 652
           T T+  +    C+  +I+
Sbjct: 838 TVTYNVLTNGFCKEGKIE 855



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 200/377 (53%), Gaps = 4/377 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F ++++ +     +  AL F   ++     N+ PN      ++  +C+ G   +A++L+
Sbjct: 490 AFTTIIHWLCMNSRFESALRFLREML---LRNMRPNDGLLTTLVGGLCKEGKHSDAVELW 546

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             +  +    ++ T   L+ GLCK   + EAV LL +M   G     +T+N LI+G CK 
Sbjct: 547 FRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKE 606

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G++    KL   M  +G  P+  TYN LIHG+C  G LD+AV+L +   +   +PN  TY
Sbjct: 607 GKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTY 666

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
           G +I+G  K  +  +G ++   +  +   +N  +Y+TLI    + G   +A KL   M  
Sbjct: 667 GVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRS 726

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KG  P T  YS+LI G+C +G+ ++A+ ++ EM   G   N   Y++L+ G+ + G+  K
Sbjct: 727 KGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDK 786

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
            V + ++M+  +   N++ Y+V+I G  + G ++ A  +  +M+ +G  PD V Y+ + +
Sbjct: 787 VVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN 846

Query: 516 GLCNAGSVEEALKLFNE 532
           G C  G +EE  KL  E
Sbjct: 847 GFCKEGKIEEG-KLLAE 862



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 199/414 (48%), Gaps = 12/414 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T  S+IQ +   G  +  E +L  M      +   +F  I          E A+R    M
Sbjct: 455 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 514

Query: 145 VDEFHCKRTVKSFNSVLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +      R ++  + +L  ++    +EG +  A+E +  ++         N +T N +I 
Sbjct: 515 L-----LRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEK---GFGANLVTTNALIH 566

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+ G +  A++L ++M  R    D  TY TL+ G CKE +++E   L  EM   G  P
Sbjct: 567 GLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEP 626

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T+N+LI+G+C+ G+L  A  L +    +  +PN  TY  +I G C    +++   L 
Sbjct: 627 DTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLF 686

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             ++      N V Y T+I    + G  V+  ++   M  +        YS+LI G+   
Sbjct: 687 TELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNI 746

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ EDA  L  +M ++G  PN V Y+ALI G C++G+ D+   +L EM +     N  TY
Sbjct: 747 GRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITY 806

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
           + ++ G+ +SG    A ++  +M     V + V Y+VL +G C++GK+ E +++
Sbjct: 807 TVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLL 860



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           +LPN + +  +I   C+LG +D  + + +EM   +  P+  TY  ++DG  K   +  A 
Sbjct: 764 LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAA 823

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            LL EM   G  P  VT+NVL NG CK G++     L ++
Sbjct: 824 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           +I PN +T+ ++I    + G +  A +L  EM  +   PD  TY  L +G CKE +++E 
Sbjct: 798 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857

Query: 247 VLLLDE 252
            LL ++
Sbjct: 858 KLLAED 863


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 140/421 (33%), Positives = 233/421 (55%), Gaps = 6/421 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P+ +T+N++I   C+ G + +A+QL   M V    PD+ TY T++  LC   +L EA+ 
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMSV---SPDVVTYNTILRTLCDSGKLKEAME 233

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +LD      C+P  +T+ +LI   CK   +G+A KL+D M  KGC P+ VTYN LI+G+C
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +G LD+A+  L+ M +  C PN +T+  I+  +   GR +D  + L  M  +    +  
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ LI+ L ++G    A+ + ++M + GC PN++ Y+ L+  LC+  K + A E L  M
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ GC  +  TY++L+    + GK   AVEI   +    C    + Y+ +I GL + GK 
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKT 473

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A  +  +M  +G KPD++ YS+++ GL   G V+EA+  F+++   E   +P+  TYN
Sbjct: 474 DDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLE--EMGVKPNAITYN 531

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            ++  LCK      +ID L  M+ RGC P   +  I +  L  +  A ++  + LNEL  
Sbjct: 532 SIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLA-KEALELLNELCS 590

Query: 609 R 609
           R
Sbjct: 591 R 591



 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 224/414 (54%), Gaps = 7/414 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   Y K   +  A++L    +D       V ++N++L  +   G    A+E  + 
Sbjct: 182 TYNVLISGYCKTGEIGSALQL----LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
            +  +     P+ +T+ ++I+  C+   V  A++L  EM  + C+PD+ TY  L++G+CK
Sbjct: 238 QMQRE---CYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICK 294

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E RLDEA+  L+ M   GC P  +T N+++  +C  G    A K +  M  KGC P+ VT
Sbjct: 295 EGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVT 354

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +N LI+ LC KG + +A+ +L++M    C PN ++Y  +++ L K  +       L  M 
Sbjct: 355 FNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMV 414

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            R  + +   Y+TL++ L K+GK + A+++  Q+  KGC P  + Y+ +IDGL +VGK D
Sbjct: 415 SRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTD 474

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A ++L EM   G   +  TYS+L+ G    GK  +A+  + D+ +     N + Y+ ++
Sbjct: 475 DAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIM 534

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            GLC+  +   A      M++RGCKP   +Y  +I GL   G  +EAL+L NE+
Sbjct: 535 LGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNEL 588



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 238/458 (51%), Gaps = 26/458 (5%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           ++ + R G ++   +   +M  R   PDI    +L+ GLCK  +  +A  +++ ++  G 
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  +T+NVLI+G CK GE+G A +L+D M +    P+ VTYNT++  LC  G L +A+ 
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAME 233

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +LDR +  +C P+ +TY  +I    K        ++L  M ++    +   Y+ LI+G+ 
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           KEG+ ++A++    M   GC+PN + ++ ++  +C  G+  +AE+ L EMI  GC+ +  
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ L+      G   +A+++ + M ++ C  N + Y+ L+H LC+D K+  A      M
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +SRGC PD+V Y++++  LC  G V+ A+++ N++        P + TYN +++ L K  
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL--GSKGCSPVLITYNTVIDGLSKVG 471

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
               +I LL+ M  +G  PD++T +  +  L  + +  +         AI  F      G
Sbjct: 472 KTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDE---------AIAFFHDLEEMG 522

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                       + P   T+  ++  LC+ ++   AI+
Sbjct: 523 ------------VKPNAITYNSIMLGLCKARQTVRAID 548



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/424 (31%), Positives = 228/424 (53%), Gaps = 14/424 (3%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++N +++   + G    AL+  +       M++ P+ +T+N +++T+C  G +  A++
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDR------MSVSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +      R C PD+ TY  L++  CKE+ + +A+ LLDEM+  GC P  VT+NVLING+C
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G L  A + +++M   GC PN +T+N ++  +C  G    A   L  M+   C P+ V
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 334 TYGTIINGLVK---LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           T+  +IN L +   +GRA+D   VL  M +     N   Y+ L+  L K+ K E A++  
Sbjct: 354 TFNILINFLCRKGLIGRAID---VLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYL 410

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M+ +GC P+ V Y+ L+  LC+ GK D A EIL ++ + GC+    TY++++ G  + 
Sbjct: 411 DIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKV 470

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           GK   A+++  +M       + + YS L+ GL  +GK+ EA   +  +   G KP+ + Y
Sbjct: 471 GKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITY 530

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +S++ GLC A     A+     M+    K  P   +Y IL+  L  +     +++LLN +
Sbjct: 531 NSIMLGLCKARQTVRAIDFLAYMVARGCK--PTETSYMILIEGLAYEGLAKEALELLNEL 588

Query: 571 MDRG 574
             RG
Sbjct: 589 CSRG 592



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 224/398 (56%), Gaps = 10/398 (2%)

Query: 85  TFYSLIQHYANSGDFK-SLEMVLYRMRRE--KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ ++++   +SG  K ++E++  +M+RE    V+   ++  + +A  K   V +A++L 
Sbjct: 214 TYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVI---TYTILIEATCKESGVGQAMKLL 270

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M D+  CK  V ++N ++N I +EG    A+ F NH+ +       PN +T N+++++
Sbjct: 271 DEMRDK-GCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPS---YGCQPNVITHNIILRS 326

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C  G   +A +   EM  + C P + T+  L++ LC++  +  A+ +L++M   GC P 
Sbjct: 327 MCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPN 386

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            +++N L++ LCK+ ++ RA + +D M  +GC P+ VTYNTL+  LC  G +D AV +L+
Sbjct: 387 SLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 446

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           ++ +  C P  +TY T+I+GL K+G+  D  ++L  M+ +    +   YSTL+ GL +EG
Sbjct: 447 QLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREG 506

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K ++A+  +  + E G KPN + Y++++ GLC+  +   A + L  M+  GC     +Y 
Sbjct: 507 KVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYM 566

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            L++G    G   +A+E+  ++     V       V++
Sbjct: 567 ILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 265/508 (52%), Gaps = 31/508 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ ++ ++    LP+ + F  ++  V R+   D  I L+++M  +    DIY++  
Sbjct: 63  AIDLFSDMLRSRP---LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  ++L  A+    ++   G  P  VTFN L++GLC    +  A  L   MF   
Sbjct: 120 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN VT+ TL++GLC +G + +AV+LLDRM+     P ++TYGTI++G+ K G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 353 RVLMSMEERKFHV-NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +L  MEE    + N  IYS +I  L K+G+  DA  L+ +M EKG  P+   Y+++I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C  G+  +AE++L EM+    + +  TY++L+  F + GK  +A E++ +M     + N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + YS +I G C+  +L  A  ++  M ++GC P+++ ++++I G C A  +++ ++L +
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
           EM   E     D  TYN L++      +++ ++DLL  M+  G  PD+VTC+  L  L  
Sbjct: 420 EM--TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 590 -----------------KEKLEA--PQDGTD----FLNELAIRLFKRQRTSGGFKIVEVM 626
                            K+ L+A  P +G +      N L   L    +     ++ E M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + + P T T+  ++  LC+  R+  A
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 248/506 (49%), Gaps = 49/506 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG-------LYHRALE--------FYN 178
           V EA+ LFH M  E  C+  V +F +++N + +EG       L  R +E         Y 
Sbjct: 165 VSEALNLFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 179 HIVNA------------------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
            IV+                   +  +I+PN + ++ +I ++C+ G   +A  LF EM  
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +   PD++TY +++ G C   R  +A  LL EM      P  VT+N LIN   K G+   
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A +L D M  +G +PN +TY+++I G C +  LD A  +   M    C PN +T+ T+I+
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G     R  DG  +L  M E     +   Y+TLI G +  G    A+ L ++M+  G  P
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMIN------------NGCAANAFTYSSLMKGFF 448
           + V    L+DGLC  GK  +A E +F+++             NG   +  TY+ L+ G  
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             GK  +A E++++M     V + + YS +I GLC+  +L EA  ++  M S+   P+VV
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            ++++I+G C AG V++ L+LF EM         +  TY  L+    K  NI+ ++D+  
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEM--GRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLE 594
            M+  G  PD +T    LT L  K E
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEE 666



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++NS++      G +  A +    ++  K   I P+ +T+N +I    + G    A +L+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  R   P+  TY +++DG CK+NRLD A  +   M   GC P  +TFN LI+G C  
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +    +L+  M   G + +  TYNTLIHG  L G+L+ A+ LL  M++S   P+ VT 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNE-----------YIYSTLISGLFKEGKAE 384
            T+++GL   G+  D   +   M++ K  ++              Y+ LISGL  EGK  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +L+++M  +G  P+T+ YS++IDGLC+  + DEA ++   M +   + N  T+++L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+ ++G+    +E++ +M +   V N + Y  LI G  + G +  A  ++ +M+S G  
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           PD +   +M+ GL +   ++ A+ +  ++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 199/440 (45%), Gaps = 21/440 (4%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L  G  +   L++A+ L  +M      P+ V F  L+  + +         L   M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              +  ++  LI   C    L  A+S   ++      P+ VT+ T+++GL    R  +  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M E     N   ++TL++GL +EG+  +A+ L  +MME G +P  + Y  ++DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 413 CRVGKPDEAEEILFEMIN-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           C+ G    A  +L +M   +    N   YS+++    + G+   A  ++ +M +     +
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y+ +I G C  G+  +A  +  +ML R   PDVV Y+++I+     G   EA +L++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 532 EMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           EML   P+   P+  TY+ +++  CKQ+ +  +  +   M  +GC P+L+T N  +    
Sbjct: 350 EML---PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTS-----GGFKIV----------EVMLQKFLSPQT 635
              +   DG + L+E+         T+      GF +V          + M+   L P  
Sbjct: 407 GA-KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465

Query: 636 STWERVVQELCRPKRIQAAI 655
            T + ++  LC   +++ A+
Sbjct: 466 VTCDTLLDGLCDNGKLKDAL 485



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 3/173 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V+++N +++ +I EG +  A E Y  +    H  I+P+T+T++ +I  +C+   +D A Q
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEM---PHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F  M  ++  P++ T+ TL++G CK  R+D+ + L  EM   G     +T+  LI G  
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           K G +  A  +   M   G  P+ +T   ++ GL  K  L +AV++L+++  S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 93/214 (43%), Gaps = 23/214 (10%)

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L  GF E      A++++ DM ++  + + V +  L+  +    +      ++ +M  + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            + D+ +++ +I   C+   +  AL  F ++  L     PDV T+N LL+ LC +  +S 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKL--GLHPDVVTFNTLLHGLCVEDRVSE 167

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           +++L + M +  C P++VT    +  L                      +  R      +
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGL---------------------CREGRIVEAVAL 206

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           ++ M++  L P   T+  +V  +C+     +A+N
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  259 bits (661), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 165/536 (30%), Positives = 276/536 (51%), Gaps = 21/536 (3%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  +  +  LV+E  +++  M+++  C   + ++N ++N   + G    A ++ + IV A
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCP-NIYTYNKMVNGYCKVGNVEEANQYVSMIVEA 247

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               + P+  T+  +I   C+   +D+A ++F+EMP++ C  +   Y  L+ GLC E R+
Sbjct: 248 ---GLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRI 304

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEA+ L  +M+ D C+PT  T+ VLI  LC +     A  LV  M  KG  PN  TY  L
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVL 364

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  LC +  L+KA  LL +M+    MPN +TY  +ING  K G   D   V+  ME R  
Sbjct: 365 IDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNL 424

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   Y+ LI G  K      AM +  +M+E+   P+ V Y++LIDG CR G  D A  
Sbjct: 425 RPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L  M + G   + +TY+S++    +S +  +A +++  + + + + N V Y+ LI G C
Sbjct: 484 LLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYC 543

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK+ EA ++  +MLS+ C P+ + ++++IHGLC  G ++EA  L  +M+ ++   QP 
Sbjct: 544 KAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKID--LQPT 601

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL-TALKE-KLEAPQDGTD 601
           V T  IL++ L K  +  H+      M+  G  PD  T   F+ T  +E +L+  +D   
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVA 661

Query: 602 FLNELAIR--LFKRQ----------RTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            + E  +   LF             RT+  F +++ M      P   T+  +++ L
Sbjct: 662 KMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHL 717



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/477 (32%), Positives = 235/477 (49%), Gaps = 23/477 (4%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N ++ ++ R GLVD   Q++ EM      P+IYTY  +++G CK   ++EA   +  + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P   T+  LI G C+  +L  A K+   M LKGC  NEV Y  LIHGLC++  +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A+ L  +M    C P   TY  +I  L    R  +   ++  MEE+    N + Y+ LI
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L  + K E A +L  QM+EKG  PN + Y+ALI+G C+ G  ++A +++  M +    
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLR 425

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  TY+ L+KG+ +    HKA+ +   M +   + + V Y+ LI G C  G    A  +
Sbjct: 426 PNTRTYNELIKGYCKRNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNA 553
            + M  RG  PD   Y+SMI  LC +  VEEA  LF+    LE K   P+V  Y  L++ 
Sbjct: 485 LSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDS---LEQKDVIPNVVMYTALIDG 541

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL------------TALKEKLE----APQ 597
            CK   ++ +  +L  M+ + C P+ +T N  +            T L+EK+      P 
Sbjct: 542 YCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPT 601

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             TD +  L  RL K       ++  + ML     P   T+   +Q  CR  R+Q A
Sbjct: 602 VSTDTI--LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDA 656



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 136/471 (28%), Positives = 235/471 (49%), Gaps = 23/471 (4%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++N+++N   + G+   AL+    +   +  N+ PNT T+N +IK  C+   V  A+ 
Sbjct: 393 VITYNALINGYCKRGMIEDALDVVELM---ESRNLRPNTRTYNELIKGYCKRN-VHKAMG 448

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  +M  R   PD+ TY +L+DG C+    D A  LL  M   G  P P T+  +I+ LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLC 508

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K+  +  A  L D++  K  +PN V Y  LI G C  G +++A  +L++M++  C+PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSL 568

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           T+  +I+GL   G+  +   +   M +          + LI  L K+G  + A + ++QM
Sbjct: 569 TFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +  G KP+   Y+  I   CR G+  +AE+++ +M  NG + + FTYSSL+KG+ + G+ 
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIH---------------GLCEDGKLREARMV---W 495
           + A  + K M    C  ++  +  LI                G+C    + E  +V    
Sbjct: 689 NSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELL 748

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M+  G  P+  +Y  ++ G+C  G++  A K+F+ M   E  S P    +N LL+  C
Sbjct: 749 EKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGIS-PSELVFNALLSCCC 807

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           K    + +  +++ M+  G  P L +C I +  L +K E  +  + F N L
Sbjct: 808 KLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLL 858



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 132/488 (27%), Positives = 232/488 (47%), Gaps = 26/488 (5%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y K  ++E+A+ +   M +  + +   +++N ++    +  + H+A+   N ++  
Sbjct: 399 LINGYCKRGMIEDALDVVELM-ESRNLRPNTRTYNELIKGYCKRNV-HKAMGVLNKMLER 456

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   +LP+ +T+N +I   CR G  D+A +L   M  R   PD +TY +++D LCK  R+
Sbjct: 457 K---VLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRV 513

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA  L D ++     P  V +  LI+G CK G++  A  +++ M  K CLPN +T+N L
Sbjct: 514 EEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNAL 573

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           IHGLC  G L +A  L ++MV     P   T   +I+ L+K G      R    M     
Sbjct: 574 IHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGT 633

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             + + Y+T I    +EG+ +DA  +  +M E G  P+   YS+LI G   +G+ + A  
Sbjct: 634 KPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFV 693

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHK------------------AVEIWKDMAK 465
           +L  M + GC  +  T+ SL+K   E   G                     VE+ + M +
Sbjct: 694 VLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVE 753

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVE 524
           +    N   Y  L+ G+CE G LR A  V+  M  + G  P  + +++++   C      
Sbjct: 754 HGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHN 813

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA K+ ++M+C+     P + +  IL+  L K+        +  +++  G   D +   I
Sbjct: 814 EAAKVVDDMICV--GHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKI 871

Query: 585 FLTALKEK 592
            +  + ++
Sbjct: 872 IIDGVGKQ 879



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 203/453 (44%), Gaps = 27/453 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI     SG+F S   +L  M     V    ++  +  +  K+  VEEA  LF ++
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM--NILPNTLTFNLVIKTV 202
            ++      V  + ++++   + G  + A     H++  K +  N LPN+LTFN +I  +
Sbjct: 524 -EQKDVIPNVVMYTALIDGYCKAGKVNEA-----HLMLEKMLSKNCLPNSLTFNALIHGL 577

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C  G +  A  L  +M   + +P + T   L+  L K+   D A     +M   G  P  
Sbjct: 578 CTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDA 637

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+   I   C+ G L  A  +V  M   G  P+  TY++LI G    G  + A  +L R
Sbjct: 638 HTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKR 697

Query: 323 MVASKCMPNEVTYGTIINGLV--KLGRAVDG----------------ARVLMSMEERKFH 364
           M  + C P++ T+ ++I  L+  K G+   G                  +L  M E    
Sbjct: 698 MHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVT 757

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKPDEAEE 423
            N   Y  L+ G+ + G    A K++  M +K G  P+ +V++AL+   C++ K +EA +
Sbjct: 758 PNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAK 817

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++ +MI  G      +   L+   ++ G+  +   +++++ +     +E+ + ++I G+ 
Sbjct: 818 VVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVG 877

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + G +     ++  M   GC      YS +I G
Sbjct: 878 KQGLVEAFYELFNVMEKNGCTFSSQTYSLLIEG 910


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 149/470 (31%), Positives = 254/470 (54%), Gaps = 9/470 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I   + KA+ +++A+  F  M  EF      +++N V+N + +  L  +A E    
Sbjct: 9   TWTIIIDGFCKANQLKQALACFEKM-REFVAPNE-RTYNVVVNGLCKARLTSKAYEVLKE 66

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDGLC 238
           + + K  ++ P+ +T++ VI   C+ G +D A ++ REM  R+   PD+ TY +++DGLC
Sbjct: 67  MRDGK--SVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNE 297
           ++ ++D A  ++ EM++ G  P   TF+ LI G C   ++  A KL   +       P+ 
Sbjct: 125 RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDV 184

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           VTY  LI G C  GNL+KA+ +L  M   KC+PN VTY ++++GL K G       +   
Sbjct: 185 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M  +    N   Y+TLI GL    K + A  L  +M    C P+TV Y+AL+DG CR+G+
Sbjct: 245 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGR 304

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YS 476
            +EA+++  EM    C  +  TY+ L++GF  + +  +A  + ++M     +  +V  YS
Sbjct: 305 IEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 364

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +++ G     +  EA     +M++R   P+ V YSS+I GLC AG V+ A+++   M+  
Sbjct: 365 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV-- 422

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             + +P V T+N ++ ALC+  ++  +  LL +M   G +P +VT    L
Sbjct: 423 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLL 472



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/446 (31%), Positives = 245/446 (54%), Gaps = 10/446 (2%)

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
             C+ TV ++  +++   +     +AL  +  +       + PN  T+N+V+  +C+  L
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKM----REFVAPNERTYNVVVNGLCKARL 56

Query: 208 VDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV-DGCFPTPVTF 265
              A ++ +EM   ++  PD+ TY T+++G CK+  +D A  +L EM   DG  P  VT+
Sbjct: 57  TSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTY 116

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             +++GLC++G++ RA ++V  M LKG  P++ T++ LI G C    +D+A+ L   ++ 
Sbjct: 117 TSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILT 176

Query: 326 SKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           S    P+ VTY  +I+G  K G      ++L  ME RK   N   YS+L+ GL K G  +
Sbjct: 177 SSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 236

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+ L+++M  KGC PN V Y+ LI GLC   K D A  ++ EM    C  +  +Y++L+
Sbjct: 237 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALL 296

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM-LSRGC 503
            G+   G+  +A +++K+MA  +C+ + + Y+ L+ G C   +L EAR +   M  + G 
Sbjct: 297 DGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGI 356

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PDVV YS ++ G   A    EA +   EM+       P+  TY+ L++ LCK   + H+
Sbjct: 357 DPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI--ARNVAPNAVTYSSLIDGLCKAGRVDHA 414

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +++L +M+++  +P + T N  + AL
Sbjct: 415 MEVLKNMVNKRVEPSVGTFNSVIGAL 440



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/486 (30%), Positives = 244/486 (50%), Gaps = 21/486 (4%)

Query: 105 VLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
           VL  MR  K V  +  ++  +   + K   ++ A  +   MV        V ++ SV++ 
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           + ++G   RA E    +   K   + P+  TF+ +I   C    VD A++L++E+   + 
Sbjct: 123 LCRDGKMDRACEMVREM---KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS 179

Query: 224 -EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
            +PD+ TY  L+DG CK   L++A+ +L  M+   C P  VT++ L++GLCK G+L +A 
Sbjct: 180 WKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQAL 239

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
            L   M  KGC+PN VTY TLIHGLC    +D A  L+D M A+ C P+ V+Y  +++G 
Sbjct: 240 DLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGY 299

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM-MEKGCKPN 401
            +LGR  +  ++   M  +    +   Y+ L+ G     + E+A  L + M    G  P+
Sbjct: 300 CRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPD 359

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V YS ++ G  R  +  EA E + EMI    A NA TYSSL+ G  ++G+   A+E+ K
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           +M       +   ++ +I  LC  G + EA  +   M + G +P +V Y++++ G    G
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479

Query: 522 SVEEALKLFNEMLC----------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +E A +LF  M            L P+       ++ L+  LCK   I  ++ ++  + 
Sbjct: 480 RMEIAYELFEVMRKKAKKSSSAANLVPEQ-----AFSALIRGLCKAREIDKAMAVVEELR 534

Query: 572 DRGCDP 577
            R C+P
Sbjct: 535 SRECEP 540



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 246/459 (53%), Gaps = 15/459 (3%)

Query: 85  TFYSLIQHYANSGDF-KSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFH 142
           T+ S++      G   ++ EMV  R  + K V  +K +F  +   +  A  V+EA++L+ 
Sbjct: 115 TYTSVVDGLCRDGKMDRACEMV--REMKLKGVEPDKFTFSALITGWCNARKVDEALKLYK 172

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            ++     K  V ++ ++++   + G   +A++    +   K    +PN +T++ ++  +
Sbjct: 173 EILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK---CVPNVVTYSSLLHGL 229

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ G +D A+ LFR M  + C P++ TY TL+ GLC  +++D A LL+DEM    C P  
Sbjct: 230 CKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDT 289

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V++N L++G C+ G +  A +L   M  K CLP+ +TY  L+ G C    L++A  LL+ 
Sbjct: 290 VSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLEN 349

Query: 323 M-VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           M  A+   P+ VTY  ++ G  +  R V+ A  +  M  R    N   YS+LI GL K G
Sbjct: 350 MKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG 409

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + + AM++ K M+ K  +P+   ++++I  LCR+G  DEA ++L  M  +G      TY+
Sbjct: 410 RVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 469

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNC-------VYNEVCYSVLIHGLCEDGKLREARMV 494
           +L++GF  +G+   A E+++ M K          +  E  +S LI GLC+  ++ +A  V
Sbjct: 470 TLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAV 529

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             ++ SR C+P      +++ GL  AG  EEA KL N +
Sbjct: 530 VEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 171/346 (49%), Gaps = 22/346 (6%)

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
           +C P  VT+  II+G  K  +          M E     NE  Y+ +++GL K      A
Sbjct: 2   ECQPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKA 60

Query: 387 MKLWKQMME-KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYSSLM 444
            ++ K+M + K   P+ V YS +I+G C+ G+ D A EIL EM+  +G A +  TY+S++
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML-SRGC 503
            G    GK  +A E+ ++M       ++  +S LI G C   K+ EA  ++ ++L S   
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           KPDVV Y+++I G C +G++E+A+K+   M     K  P+V TY+ LL+ LCK  ++  +
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVME--GRKCVPNVVTYSSLLHGLCKAGDLDQA 238

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEA-------------PQDGTDFLNELAI 608
           +DL   M  +GC P++VT    +  L    K++A             P D   + N L  
Sbjct: 239 LDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSY-NALLD 297

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              +  R     ++ + M  K   P   T+  +V+  C   R++ A
Sbjct: 298 GYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA 343



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 137/283 (48%), Gaps = 10/283 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++ +L+  Y   G  +  + +   M  +  +    ++  + + +  A  +EEA  L   M
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    V +++ V+    +   +  A EF   ++     N+ PN +T++ +I  +C+
Sbjct: 351 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMI---ARNVAPNAVTYSSLIDGLCK 407

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD+A+++ + M  +  EP + T+ +++  LC+   +DEA  LL  M   G  P  VT
Sbjct: 408 AGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVT 467

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGC-------LPNEVTYNTLIHGLCLKGNLDKAV 317
           +  L+ G  + G +  A +L + M  K         L  E  ++ LI GLC    +DKA+
Sbjct: 468 YTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAM 527

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           ++++ + + +C P E     I++GL++ GR  +  +++ S+ +
Sbjct: 528 AVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 570



 Score = 39.3 bits (90), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 77/178 (43%), Gaps = 7/178 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI     +G       VL  M  ++      +F  +  A  +   ++EA +L   M
Sbjct: 397 TYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAM 456

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI-----VNAKHMNILPNTLTFNLVI 199
                 +  + ++ ++L    + G    A E +  +      ++   N++P    F+ +I
Sbjct: 457 A-AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQ-AFSALI 514

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           + +C+   +D A+ +  E+  R CEP       ++DGL +  R +EA  L++ +   G
Sbjct: 515 RGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 139/415 (33%), Positives = 237/415 (57%), Gaps = 6/415 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V ++N+VL + + +     A  F++ +++     + PN  T+N++++ +C  G    A+
Sbjct: 122 SVLAYNAVL-LALSDASLPSARRFFDSMLSD---GVAPNVYTYNILVRALCGRGHRKEAL 177

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            + R+M    C+P+  TY TL+   C+   +D A  L+D M+  G  P  VTFN ++NG+
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G +  A K+ D M  +G  P+ V+YNTL+ G C  G   +A+S+   M     MP+ 
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV 297

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VT+ ++I+ + K G       ++  M ER   +NE  ++ LI G  K+G  +DA+   ++
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M +   +P+ V Y+ALI+G C VG+ DEA E++ EM   G   +  TYS+++  + ++G 
Sbjct: 358 MRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGD 417

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            H A ++ + M +N  + + + YS LI  LCE+ +L +A +++  M+S G +PD V Y+S
Sbjct: 418 THSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTS 477

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           +I G C  G+VE AL L +EM  ++    PDV TY++L+N L K +    +  LL
Sbjct: 478 LIDGHCKEGNVERALSLHDEM--VKAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 211/402 (52%), Gaps = 3/402 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ L +N V+  +    L  +A + F  M      P++YTY  L+  LC      EA+ +
Sbjct: 121 PSVLAYNAVLLALSDASL-PSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +M+  GC P  VT+N L+   C+ GE+ RA +LVD M   G  PN VT+N++++G+C 
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G ++ A  + D MV     P+ V+Y T++ G  K+G + +   V   M  +    +   
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +++LI  + K G  E A+ L ++M E+G + N + ++ALIDG C+ G  D+A   + EM 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                 +   Y++L+ G+   G+  +A E+ ++M       + V YS ++   C++G   
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  +  QML  G  PD + YSS+I  LC    + +A  LF  M+ L    QPD  TY  
Sbjct: 420 SAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISL--GLQPDEVTYTS 477

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           L++  CK+ N+  ++ L + M+  G  PD+VT ++ +  L +
Sbjct: 478 LIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSK 519



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 151/509 (29%), Positives = 253/509 (49%), Gaps = 23/509 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  +  +G+    E ++  MR         +F  +     KA  +E+A ++F  M
Sbjct: 194 TYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V E      V S+N+++    + G  H AL  +  +       I+P+ +TF  +I  +C+
Sbjct: 254 VKEGLAPDGV-SYNTLVGGYCKVGCSHEALSVFAEMTRK---GIMPDVVTFTSLIHVMCK 309

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A+ L REM  R  + +  T+  L+DG CK+  LD+A+L + EM+     P+ V 
Sbjct: 310 AGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVC 369

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LING C  G +  A +LV  M  KG  P+ VTY+T++   C  G+   A  L  +M+
Sbjct: 370 YNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQML 429

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +  +P+ +TY ++I  L +  R  D   +  +M       +E  Y++LI G  KEG  E
Sbjct: 430 ENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVE 489

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG------------ 432
            A+ L  +M++ G  P+ V YS LI+GL +  +  EA+ +LF++ +              
Sbjct: 490 RALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549

Query: 433 -CAANAFTYS--SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            C  NA   S  +L+KGF   G  ++A ++++ +   N   +   YSVLIHG C +G + 
Sbjct: 550 RCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVM 609

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML-CLEPKSQPDVFTYN 548
           +A     QML  G  P+  +  S+I GL   G V EA ++  ++L C    S  D     
Sbjct: 610 KALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCC---SLADAEASK 666

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDP 577
            L++   K+ N+   +D+L+ M   G  P
Sbjct: 667 ALIDLNLKEGNVDAVLDVLHGMARDGLLP 695



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 224/438 (51%), Gaps = 7/438 (1%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A R F +M+ +      V ++N ++  +   G    AL     +  A      PN +T+N
Sbjct: 141 ARRFFDSMLSD-GVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGA---GCDPNAVTYN 196

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            ++   CR G VD A +L   M     +P++ T+ ++++G+CK  R+++A  + DEM  +
Sbjct: 197 TLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKE 256

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P  V++N L+ G CK G    A  +   M  KG +P+ VT+ +LIH +C  GNL++A
Sbjct: 257 GLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERA 316

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           V L+  M       NE+T+  +I+G  K G   D    +  M + +   +   Y+ LI+G
Sbjct: 317 VGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALING 376

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
               G+ ++A +L ++M  KG KP+ V YS ++   C+ G    A ++  +M+ NG   +
Sbjct: 377 YCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPD 436

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
           A TYSSL++   E  +   A  ++K+M       +EV Y+ LI G C++G +  A  +  
Sbjct: 437 AITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHD 496

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M+  G  PDVV YS +I+GL  +   +EA +L  ++   EP   P    Y+ L+   C+
Sbjct: 497 EMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEP--VPANIKYDALMRC-CR 553

Query: 557 QSNISHSIDLLNSMMDRG 574
            + +   + LL     +G
Sbjct: 554 NAELKSVLALLKGFCMKG 571



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 201/401 (50%), Gaps = 26/401 (6%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P+ + +N ++  L  +  L  A +  D+M   G  PN  TYN L+  LC +G+  +A
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           +S+L  M  + C PN VTY T++    + G      R++  M E     N   ++++++G
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           + K G+ EDA K++ +M+++G  P+ V Y+ L+ G C+VG   EA  +  EM   G   +
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             T++SL+    ++G   +AV + ++M +     NE+ ++ LI G C+ G L +A +   
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALC 555
           +M     +P VV Y+++I+G C  G ++EA +L  EM   E K  +PDV TY+ +L+A C
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM---EAKGVKPDVVTYSTILSAYC 413

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           K  +   +  L   M++ G  PD +T +  +  L E+                     +R
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEE---------------------KR 452

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                 + + M+   L P   T+  ++   C+   ++ A++
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALS 493



 Score = 40.8 bits (94), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 61/134 (45%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           ++K  C  GL++ A ++++ +  RN   D   Y  L+ G C+E  + +A+    +M   G
Sbjct: 563 LLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCG 622

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P   +   LI GL + G +  A +++  +     L +      LI     +GN+D  +
Sbjct: 623 FAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDAVL 682

Query: 318 SLLDRMVASKCMPN 331
            +L  M     +P+
Sbjct: 683 DVLHGMARDGLLPS 696



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 38/229 (16%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKR 114
           +GN +      DE+  +        L D   YS LI   + S   K  + +L+++  E+ 
Sbjct: 485 EGNVERALSLHDEMVKAG------VLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEP 538

Query: 115 VVLE---------------KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNS 159
           V                  KS + + K +    L+ EA +++ +++D     R      S
Sbjct: 539 VPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILD-----RNWNLDGS 593

Query: 160 VLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           V +V+I    +EG   +AL F+  ++        PN+ +   +I+ +   G+V  A Q+ 
Sbjct: 594 VYSVLIHGHCREGNVMKALSFHKQMLQC---GFAPNSTSTISLIRGLFEKGMVVEADQVI 650

Query: 216 REMPVRNC--EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           +++   NC    D      L+D   KE  +D  + +L  M  DG  P+P
Sbjct: 651 QQL--LNCCSLADAEASKALIDLNLKEGNVDAVLDVLHGMARDGLLPSP 697


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 265/508 (52%), Gaps = 31/508 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ ++ ++    LP+ + F  ++  V R+   D  I L+++M  +    DIY++  
Sbjct: 63  AIDLFSDMLRSRP---LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 119

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  ++L  A+    ++   G  P  VTFN L++GLC    +  A  L   MF   
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN VT+ TL++GLC +G + +AV+LLDRM+     P ++TYGTI++G+ K G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 353 RVLMSMEERKFHV-NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +L  MEE    + N  IYS +I  L K+G+  DA  L+ +M EKG  P+   Y+++I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C  G+  +AE++L EM+    + +  TY++L+  F + GK  +A E++ +M     + N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + YS +I G C+  +L  A  ++  M ++GC P+++ ++++I G C A  +++ ++L +
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
           EM   E     D  TYN L++      +++ ++DLL  M+  G  PD+VTC+  L  L  
Sbjct: 420 EM--TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 590 -----------------KEKLEA--PQDGTD----FLNELAIRLFKRQRTSGGFKIVEVM 626
                            K+ L+A  P +G +      N L   L    +     ++ E M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + + P T T+  ++  LC+  R+  A
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 248/506 (49%), Gaps = 49/506 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG-------LYHRALE--------FYN 178
           V EA+ LFH M  E  C+  V +F +++N + +EG       L  R +E         Y 
Sbjct: 165 VSEALNLFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 179 HIVNA------------------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
            IV+                   +  +I+PN + ++ +I ++C+ G   +A  LF EM  
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +   PD++TY +++ G C   R  +A  LL EM      P  VT+N LIN   K G+   
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A +L D M  +G +PN +TY+++I G C +  LD A  +   M    C PN +T+ T+I+
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G     R  DG  +L  M E     +   Y+TLI G +  G    A+ L ++M+  G  P
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMIN------------NGCAANAFTYSSLMKGFF 448
           + V    L+DGLC  GK  +A E +F+++             NG   +  TY+ L+ G  
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             GK  +A E++++M     V + + YS +I GLC+  +L EA  ++  M S+   P+VV
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            ++++I+G C AG V++ L+LF EM         +  TY  L+    K  NI+ ++D+  
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEM--GRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLE 594
            M+  G  PD +T    LT L  K E
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEE 666



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++NS++      G +  A +    ++  K   I P+ +T+N +I    + G    A +L+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  R   P+  TY +++DG CK+NRLD A  +   M   GC P  +TFN LI+G C  
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +    +L+  M   G + +  TYNTLIHG  L G+L+ A+ LL  M++S   P+ VT 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNE-----------YIYSTLISGLFKEGKAE 384
            T+++GL   G+  D   +   M++ K  ++              Y+ LISGL  EGK  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +L+++M  +G  P+T+ YS++IDGLC+  + DEA ++   M +   + N  T+++L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+ ++G+    +E++ +M +   V N + Y  LI G  + G +  A  ++ +M+S G  
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           PD +   +M+ GL +   ++ A+ +  ++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 199/440 (45%), Gaps = 21/440 (4%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L  G  +   L++A+ L  +M      P+ V F  L+  + +         L   M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              +  ++  LI   C    L  A+S   ++      P+ VT+ T+++GL    R  +  
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M E     N   ++TL++GL +EG+  +A+ L  +MME G +P  + Y  ++DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 413 CRVGKPDEAEEILFEMIN-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           C+ G    A  +L +M   +    N   YS+++    + G+   A  ++ +M +     +
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y+ +I G C  G+  +A  +  +ML R   PDVV Y+++I+     G   EA +L++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 532 EMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           EML   P+   P+  TY+ +++  CKQ+ +  +  +   M  +GC P+L+T N  +    
Sbjct: 350 EML---PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTS-----GGFKIV----------EVMLQKFLSPQT 635
              +   DG + L+E+         T+      GF +V          + M+   L P  
Sbjct: 407 GA-KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465

Query: 636 STWERVVQELCRPKRIQAAI 655
            T + ++  LC   +++ A+
Sbjct: 466 VTCDTLLDGLCDNGKLKDAL 485



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 3/173 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V+++N +++ +I EG +  A E Y  +    H  I+P+T+T++ +I  +C+   +D A Q
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEM---PHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F  M  ++  P++ T+ TL++G CK  R+D+ + L  EM   G     +T+  LI G  
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           K G +  A  +   M   G  P+ +T   ++ GL  K  L +AV++L+++  S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/214 (20%), Positives = 93/214 (43%), Gaps = 23/214 (10%)

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L  GF E      A++++ DM ++  + + V +  L+  +    +      ++ +M  + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            + D+ +++ +I   C+   +  AL  F ++  L     PDV T+N LL+ LC +  +S 
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFNTLLHGLCVEDRVSE 167

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           +++L + M +  C P++VT    +  L                      +  R      +
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGL---------------------CREGRIVEAVAL 206

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           ++ M++  L P   T+  +V  +C+     +A+N
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 151/461 (32%), Positives = 243/461 (52%), Gaps = 7/461 (1%)

Query: 135 EEAIRLFHTMVDEF-HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +EA+ L H M D+   C   V S+++V+N   +EG   +    YN +++ +   I PN +
Sbjct: 68  QEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQR---ISPNVV 124

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +I  +C+   VD A+++   M      PD  TY +++ G C   +  EA++ L +M
Sbjct: 125 TYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKM 184

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           + DG  P  VT+N L++ LCKNG    A K+ D+M  +G  P   TY TL+ G   KG L
Sbjct: 185 RSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGAL 244

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +   LLD MV +   PN   +  ++    K  +  +   V   M ++  + N   Y  +
Sbjct: 245 VEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAV 304

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I  L K G+ EDAM  ++QM+++G  P  +VY++LI GLC   K + AEE++ EM++ G 
Sbjct: 305 IGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGI 364

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N   ++S++    + G+  ++ +++  M +     + + YS LI G C  GK+ EA  
Sbjct: 365 CLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATK 424

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   M+S G KPD V YS++I+G C    +++AL LF EM        PD+ TYNI+L  
Sbjct: 425 LLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREM--ESSGVSPDIITYNIILQG 482

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KEKL 593
           L +    + + +L   +   G   +L T NI L  L K KL
Sbjct: 483 LFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKL 523



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 241/526 (45%), Gaps = 97/526 (18%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG--CFPTPVTFN 266
           ++A  +F E+ +R   PD+++Y  L++GLC ENR  EA+ LL  M  DG  C P  V+++
Sbjct: 34  EDARHVFDEL-LRRGIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
            +ING  K G+L +     + M  +   PN VTYN++I  LC    +DKA+ +L  MV S
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 327 KCMPNEVTYGTIING-----------------------------------LVKLGRAVDG 351
             MP+ +TY +I++G                                   L K GR  + 
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEG------------------------------ 381
            ++  SM +R        Y TL+ G   +G                              
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 382 -----KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
                K E+AM ++ +M ++G  PN V Y A+I  LC+ G+ ++A     +MI+ G +  
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
              Y+SL+ G     K  +A E+  +M       N + ++ +I   C++G++ E+  ++ 
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M+  G KPD++ YS++I G C AG ++EA KL   M+ +  K  PD  TY+ L+N  CK
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK--PDCVTYSTLINGYCK 450

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
            S +  ++ L   M   G  PD++T NI L                       LF+ +RT
Sbjct: 451 ISRMKDALVLFREMESSGVSPDIITYNIILQG---------------------LFQTRRT 489

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
           +   ++   + +     + ST+  ++  LC+ K    A+ + + NL
Sbjct: 490 AAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDAL-RMFQNL 534



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/510 (23%), Positives = 244/510 (47%), Gaps = 16/510 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ S++  + +SG  K   + L +MR    E  VV   S +      G+     EA ++F
Sbjct: 160 TYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRC---TEARKIF 216

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIK 200
            +M      KR +K   +    ++Q      AL   + +++    N I PN   F++++ 
Sbjct: 217 DSMT-----KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 271

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              +   V+ A+ +F +M  +   P+  TY  ++  LCK  R+++A+L  ++M  +G  P
Sbjct: 272 AYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSP 331

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             + +N LI+GLC   +  RA +L+  M  +G   N + +N++I   C +G + ++  L 
Sbjct: 332 GNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 391

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D MV     P+ +TY T+I+G    G+  +  ++L SM       +   YSTLI+G  K 
Sbjct: 392 DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKI 451

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            + +DA+ L+++M   G  P+ + Y+ ++ GL +  +   A+E+   +  +G      TY
Sbjct: 452 SRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTY 511

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  ++     A+ +++++   +       ++++I  L + G+  EA+ ++    S
Sbjct: 512 NIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 571

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSN 559
            G  P+   Y  M   +   G +EE  +LF   L +E      D    N ++  L ++  
Sbjct: 572 NGLVPNYWTYRLMAENIIGQGLLEELDQLF---LSMEDNGCTVDSGMLNFIVRELLQRGE 628

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           I+ +   L+ + ++    +  T ++F+  L
Sbjct: 629 ITRAGTYLSMIDEKHFSLEASTASLFIDLL 658


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  258 bits (660), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 159/495 (32%), Positives = 251/495 (50%), Gaps = 41/495 (8%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA+ +E   R ++ M+ E +    V ++  ++N   + G    A E    +   +     
Sbjct: 213 KANKLELFWRFYNGML-EANVLHDVYTYTHLINAHFRAG---NAKEGKRLLFEMEEKGCS 268

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+N+VI  +CR G VD A +L + M  +    D++TY  L+DG  K+ R  EA L+
Sbjct: 269 PSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLM 328

Query: 250 LDEMQVDGCFPTPV-----------------------------------TFNVLINGLCK 274
           L+EM   G  P  V                                   T+N L+ G+CK
Sbjct: 329 LEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCK 388

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G++ +A  L++ M + G  P+  TYN +I G   + N  +   LL  M  S  +P   T
Sbjct: 389 FGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYT 448

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
            G IINGL + G   D +RV   M       N  IY+TLI G  +EG+ ++A+++ K M 
Sbjct: 449 CGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMD 508

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           +KG +P+ + Y+++I GLC+  K +EA++ L EMI  G   N +TY +L+ G+ +SG+  
Sbjct: 509 KKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQ 568

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A   +K+M       N+V  + LI G C++G   EA  ++  ML R   PDV  YS++I
Sbjct: 569 VADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALI 628

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           HGL   G ++ A++L +E   LE    PDVFTYN +++  CKQ  I  +  L   M  +G
Sbjct: 629 HGLLRNGKLQGAMELLSEF--LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKG 686

Query: 575 CDPDLVTCNIFLTAL 589
             P+++T N  +  L
Sbjct: 687 ISPNIITYNALINGL 701



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 142/479 (29%), Positives = 235/479 (49%), Gaps = 19/479 (3%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  T+N ++K VC+ G ++ A  L  EM +   +PD  TY  +++G  KE        LL
Sbjct: 375 NLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLL 434

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+     PT  T  ++INGLC++G +  A+++ + M   G  PN V Y TLI G   +
Sbjct: 435 SEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQE 494

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G   +AV +L  M      P+ + Y ++I GL K  +  +    L+ M ER    N Y Y
Sbjct: 495 GRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTY 554

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             LI G  K G+ + A + +K+M+  G  PN VV +ALIDG C+ G   EA  I   M+ 
Sbjct: 555 GALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLG 614

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
                +  TYS+L+ G   +GK   A+E+  +  +   V +   Y+ +I G C+ G + +
Sbjct: 615 RSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGK 674

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--QPDVFTYN 548
           A  +   M  +G  P+++ Y+++I+GLC AG +E A +LF+ +    P      +  TY 
Sbjct: 675 AFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGI----PGKGLAHNAVTYA 730

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK----------LEAPQD 598
            +++  CK  N+S +  L + M  +G  PD    +  +   +++          LE+ Q 
Sbjct: 731 TIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQK 790

Query: 599 G---TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           G   T  LN L     K  +     +++E M+ K + P   T+  ++   C+   ++ A
Sbjct: 791 GFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEA 849



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/509 (28%), Positives = 244/509 (47%), Gaps = 15/509 (2%)

Query: 82  GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHL----VEEA 137
           G   + +LI  +   GD        +R++ E      K  +F + A  K       +E+A
Sbjct: 340 GHVAYTALIDGFMRQGDSGEA----FRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKA 395

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
             L + M+     K   +++N+++   ++E    R  +  + +   K  N++P   T  +
Sbjct: 396 DALLNEMI-MVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEM---KKSNLVPTAYTCGM 451

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I  +CR G +++A ++F  M     +P+   Y TL+ G  +E R  EAV +L  M   G
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  + +N +I GLCK+ ++  A   +  M  +G  PN  TY  LIHG C  G +  A 
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVAD 571

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
                M+     PN+V    +I+G  K G   +   +   M  R  H +   YS LI GL
Sbjct: 572 RYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGL 631

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            + GK + AM+L  + +EKG  P+   Y+++I G C+ G   +A ++   M   G + N 
Sbjct: 632 LRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNI 691

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY++L+ G  ++G+  +A E++  +      +N V Y+ +I G C+ G L +A  ++ +
Sbjct: 692 ITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDE 751

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M  +G  PD   YS++I G    G+ E+AL LF E +    K      + N L++  CK 
Sbjct: 752 MTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESV---QKGFASTSSLNALMDGFCKS 808

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             +  +  LL  M+D+   PD VT  I +
Sbjct: 809 GKVIEANQLLEDMVDKHVKPDHVTYTILI 837



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 151/567 (26%), Positives = 258/567 (45%), Gaps = 94/567 (16%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F  +++   ++GL+  A+ F+   + AK    +   L  N ++  + +   ++   + + 
Sbjct: 169 FELLIDGYKKKGLFDEAVSFF---LGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYN 225

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M   N   D+YTY  L++   +     E   LL EM+  GC P+ VT+NV+I GLC+ G
Sbjct: 226 GMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAG 285

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           E+  A +L   M  KG + +  TY+ LI G   +    +A  +L+ M +    P  V Y 
Sbjct: 286 EVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYT 345

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +I+G ++ G + +  RV   M  R   +N + Y+ L+ G+ K G  E A  L  +M+  
Sbjct: 346 ALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMV 405

Query: 397 GCKPNTVVYS-----------------------------------ALIDGLCRVGKPDEA 421
           G KP+T  Y+                                    +I+GLCR G  ++A
Sbjct: 406 GIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDA 465

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +   M++ G   NA  Y++L+KG  + G+  +AV I K M K     + +CY+ +I G
Sbjct: 466 SRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIG 525

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML------- 534
           LC+  K+ EA+    +M+ RG KP+V  Y ++IHG C +G ++ A + F EML       
Sbjct: 526 LCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPN 585

Query: 535 -------------------------CLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLN 568
                                    C+  +S  PDV TY+ L++ L +   +  +++LL+
Sbjct: 586 DVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLS 645

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG-GFKIVEVML 627
             +++G  PD+ T N  ++                       F +Q   G  F++ E M 
Sbjct: 646 EFLEKGLVPDVFTYNSIISG----------------------FCKQGGIGKAFQLHEYMC 683

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAA 654
           QK +SP   T+  ++  LC+   I+ A
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERA 710



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/559 (26%), Positives = 246/559 (44%), Gaps = 47/559 (8%)

Query: 86   FYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
            + +LI+ +   G F+    +L  M +   +  V+   S I       K+  +EEA     
Sbjct: 484  YTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII---GLCKSRKMEEAKDYLV 540

Query: 143  TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             M+ E   K  V ++ ++++   + G    A  ++  ++      I PN +    +I   
Sbjct: 541  EMI-ERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGC---GIAPNDVVCTALIDGY 596

Query: 203  CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            C+ G    A  +FR M  R+  PD+ TY  L+ GL +  +L  A+ LL E    G  P  
Sbjct: 597  CKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDV 656

Query: 263  VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             T+N +I+G CK G +G+A +L + M  KG  PN +TYN LI+GLC  G +++A  L D 
Sbjct: 657  FTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDG 716

Query: 323  MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
            +       N VTY TII+G  K G      R+   M  +    + ++YS LI G  KEG 
Sbjct: 717  IPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGN 776

Query: 383  AEDAMKLWKQMMEKG----------------------------------CKPNTVVYSAL 408
             E A+ L+ + ++KG                                   KP+ V Y+ L
Sbjct: 777  TEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTIL 836

Query: 409  IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
            ID  C+ G   EAE+   +M       NA TY++L+ G+  +G+  +   ++ +M   + 
Sbjct: 837  IDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDI 896

Query: 469  VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
              + V +SV+I    ++G   +   +   ML +G          +I  LC    V E LK
Sbjct: 897  EPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLK 956

Query: 529  LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            +  ++   E      + T + L+    K   +  +  +L SM+     PD    N  +  
Sbjct: 957  VLEKI--EEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINV 1014

Query: 589  LKEKLEAPQDGTDFLNELA 607
             ++  ++   G DFL ++A
Sbjct: 1015 EQDSTDSENAG-DFLKQMA 1032



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 213/488 (43%), Gaps = 40/488 (8%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
           R L+F+N +     M       +F+++   +C   L   A  +  +M + +       Y 
Sbjct: 83  RLLDFFNWV--QFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGG----YS 136

Query: 232 TLMDGL---CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
            ++D L   CKE  L+      +    D      V F +LI+G  K G    A       
Sbjct: 137 EILDSLIKSCKEFDLNNVNGNENSNNND----RGVVFELLIDGYKKKGLFDEAVSFFLGA 192

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              G +   +  N L+  L     L+      + M+ +  + +  TY  +IN   + G A
Sbjct: 193 KRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNA 252

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +G R+L  MEE+    +   Y+ +I GL + G+ ++A +L K M +KG   +   YS L
Sbjct: 253 KEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSIL 312

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           IDG  +  +  EA+ +L EM + G       Y++L+ GF   G   +A  + ++M     
Sbjct: 313 IDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGV 372

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N   Y+ L+ G+C+ G + +A  +  +M+  G KPD   Y++MI G     +      
Sbjct: 373 KLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKD 432

Query: 529 LFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L +EM     KS   P  +T  +++N LC+  +I  +  +   M+  G  P+ V   I+ 
Sbjct: 433 LLSEM----KKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAV---IYT 485

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
           T +K  +   Q+G               R     +I++VM +K + P    +  V+  LC
Sbjct: 486 TLIKGHV---QEG---------------RFQEAVRILKVMDKKGVQPDVLCYNSVIIGLC 527

Query: 647 RPKRIQAA 654
           + ++++ A
Sbjct: 528 KSRKMEEA 535


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  258 bits (659), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 155/507 (30%), Positives = 256/507 (50%), Gaps = 31/507 (6%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TVK+   +L+ +++       LE    +       + P+   F+  I   C+ G V++AI
Sbjct: 211 TVKTCTFLLSSLVKA----NELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAI 266

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           QLF +M      P++ TY  L+ GLCK   LDEA    ++M  DG   T +T++VLINGL
Sbjct: 267 QLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGL 326

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            K  +   A  ++     KG  PNEV YNTLI G C  GNL  A+ +   MV+    PN 
Sbjct: 327 MKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNS 386

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VT  +II G  K+G+      +L  M  R F +N   ++T+I  L    + E A++  ++
Sbjct: 387 VTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLRE 446

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +  +PN  + + L+ GLC+ GK  +A E+ F ++  G  AN  T ++L+ G  ++G 
Sbjct: 447 MLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGN 506

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +AV + K M +   V +++ Y+ LI G C++GK+ E   +  +M+ +G +PD   Y+ 
Sbjct: 507 MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNL 566

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +IHG+C  G ++EA+ L+NE  C      P+V+TY ++++  CK   I     L   ++ 
Sbjct: 567 LIHGMCRIGKLDEAVNLWNE--CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLT 624

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ-RTSGGFKIVEVMLQKFL 631
           +  + + V  N                        IR + R   T   FK+ + M  K +
Sbjct: 625 QNLELNSVVYNTL----------------------IRAYCRNGNTVEAFKLHDDMRSKGI 662

Query: 632 SPQTSTWERVVQELCRPKRIQAAINKC 658
            P T+T+  ++  +C   R++ A  KC
Sbjct: 663 PPTTATYSSLIHGMCNIGRMEDA--KC 687



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/570 (27%), Positives = 263/570 (46%), Gaps = 56/570 (9%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---- 176
           F     A+ K   VE+AI+LF  M ++      V ++N++++ + + G    A  F    
Sbjct: 249 FSTAINAFCKGGKVEDAIQLFFDM-EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKM 307

Query: 177 -----------YNHIVNAK-----------------HMNILPNTLTFNLVIKTVCRLGLV 208
                      Y+ ++N                        PN + +N +I   C++G +
Sbjct: 308 VKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNL 367

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
            +A+++  +M  +   P+  T  +++ G CK  ++++A  +L+EM   G    P  F  +
Sbjct: 368 GDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTI 427

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+ LC N     A + +  M L+   PN+    TL+ GLC +G    AV L  R++    
Sbjct: 428 IHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGF 487

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             N VT   +I+GL K G   +  R+L  M ER F +++  Y+TLISG  KEGK E+  K
Sbjct: 488 GANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFK 547

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L  +M+++G +P+T  Y+ LI G+CR+GK DEA  +  E  +     N +TY  ++ G+ 
Sbjct: 548 LRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYC 607

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           ++ K  +  +++ ++   N   N V Y+ LI   C +G   EA  +   M S+G  P   
Sbjct: 608 KADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTA 667

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            YSS+IHG+CN G +E+A  L +EM   +    P+V  Y  L+   CK   +   +++L 
Sbjct: 668 TYSSLIHGMCNIGRMEDAKCLIDEM--RKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQ 725

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
            M      P+ +T  + +           DG            K        K++  M+ 
Sbjct: 726 EMSSYDIHPNKITYTVMI-----------DGYS----------KSGDMKTAAKLLHEMVG 764

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAAINKC 658
           K + P T T+  +    C+  +I+     C
Sbjct: 765 KGIVPDTVTYNVLTNGFCKEGKIEEGFKIC 794



 Score = 50.8 bits (120), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 39/188 (20%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+ SLI    N G  +  + ++  MR+E  +     +  +   Y               
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGY--------------- 711

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
                 CK  +   + V+NV+ +   Y                +I PN +T+ ++I    
Sbjct: 712 ------CK--LGQMDKVVNVLQEMSSY----------------DIHPNKITYTVMIDGYS 747

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G +  A +L  EM  +   PD  TY  L +G CKE +++E   + D M  +G     +
Sbjct: 748 KSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEI 807

Query: 264 TFNVLING 271
           T+  L++G
Sbjct: 808 TYTTLVHG 815


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  258 bits (659), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 148/469 (31%), Positives = 251/469 (53%), Gaps = 9/469 (1%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            +  AY K  + ++A+ +F  M + F C+  ++S+NS+LN +I+   +  A  F+ +   
Sbjct: 58  LVAHAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYF-- 115

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            + M + PN  T+N++IK  CR    D A +L   M  +   PD+++Y TL++ L K   
Sbjct: 116 -ETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGY 174

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTY 300
           + +A+ L DEM   G  P    +N+LI+G  K G++  A+++ + + LKG    PN  +Y
Sbjct: 175 MSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERL-LKGPSVYPNIPSY 233

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N +I+GLC  G  D++  +  RM  ++   +  TY T+I+GL   G      RV   M E
Sbjct: 234 NVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAE 293

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                +  +Y+T+++G  + G+ E+ ++LWK M ++GC+   V Y+ LI GL    K DE
Sbjct: 294 NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDE 352

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  I   +    C A++ TY  L+ G  ++G  +KA+ I ++        +   YS +I+
Sbjct: 353 AISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMIN 412

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           GLC +G+L E   V  QM   GCKP+    +++I+G   A  +E+AL+ F  M  +    
Sbjct: 413 GLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNM--VSKGC 470

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            P V TYN L+N L K    S +  L+  M+ +G  P+++T ++ +  L
Sbjct: 471 FPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGL 519



 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 241/444 (54%), Gaps = 9/444 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + S+N ++N + + G +  + E ++ +   +    L    T++ +I  +C  G +D A +
Sbjct: 230 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDL---YTYSTLIHGLCGSGNLDGATR 286

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +++EM      PD+  Y T+++G  +  R++E + L   M+ +GC  T V++N+LI GL 
Sbjct: 287 VYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLF 345

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           +N ++  A  + + +  K C  + +TY  L+HGLC  G L+KA+S+L+     +   +  
Sbjct: 346 ENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTF 405

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            Y ++INGL + GR  + A VL  M +     N Y+ + +I+G  +  K EDA++ +  M
Sbjct: 406 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNM 465

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + KGC P  V Y+ LI+GL +  +  EA  ++ EM+  G   N  TYS LM G  +  K 
Sbjct: 466 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKL 525

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A+ +W    +     +   ++++IHGLC  GK+ +A  ++++M  R C P++V ++++
Sbjct: 526 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTL 585

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           + G       E A K+++ +  L+   QPD+ +YNI L  LC    IS ++  LN  +DR
Sbjct: 586 MEGFYKVRDFERASKIWDHI--LQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDR 643

Query: 574 GCDPDLVTCNIFLT---ALKEKLE 594
           G  P  +T NI +    ALK  +E
Sbjct: 644 GVLPTAITWNILVQGYLALKGYME 667



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 249/527 (47%), Gaps = 28/527 (5%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEF--YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
           KR +K   S  N      ++     F  Y+H     H +IL       LV     +  + 
Sbjct: 11  KRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFH-HILKRLFDPKLVAHAYAKNSMP 69

Query: 209 DNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           D A+ +F+ M  +  C+P I +Y +L++ L + N+ DEA       +  G  P   T+N+
Sbjct: 70  DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 129

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI   C+  +  +A +L++ M+ +G  P+  +Y TLI+ L   G +  A+ L D M    
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 189

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDA 386
             P+   Y  +I+G  K G  ++ + +    ++    + N   Y+ +I+GL K GK +++
Sbjct: 190 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 249

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
            ++W +M +     +   YS LI GLC  G  D A  +  EM  NG + +   Y++++ G
Sbjct: 250 FEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNG 309

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           +  +G+  + +E+WK M K  C    V Y++LI GL E+ K+ EA  +W  +  + C  D
Sbjct: 310 YLRAGRIEECLELWKVMEKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCAD 368

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            + Y  ++HGLC  G + +AL +  E      +   D F Y+ ++N LC++  +     +
Sbjct: 369 SMTYGVLVHGLCKNGYLNKALSILEE--AENGRGDLDTFAYSSMINGLCREGRLDEVAGV 426

Query: 567 LNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFL---------------NELAIR 609
           L+ M   GC P+   CN  +       KLE   D   F                N L   
Sbjct: 427 LDQMTKHGCKPNPYVCNAVINGFVRASKLE---DALRFFGNMVSKGCFPTVVTYNTLING 483

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           L K +R S  + +V+ MLQK   P   T+  ++  LC+ K++  A+N
Sbjct: 484 LSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALN 530



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 121/236 (51%), Gaps = 4/236 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   + +A  +E+A+R F  MV +  C  TV ++N+++N + +     R  E Y  +   
Sbjct: 445 VINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKA---ERFSEAYALVKEM 500

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 PN +T++L++  +C+   +D A+ L+ +   +  +PD+  +  ++ GLC   ++
Sbjct: 501 LQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKV 560

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           ++A+ L  EM+   C P  VT N L+ G  K  +  RA+K+ D++   G  P+ ++YN  
Sbjct: 561 EDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNIT 620

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           + GLC    +  AV  L+  V    +P  +T+  ++ G + L   ++   V  SM+
Sbjct: 621 LKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVFVPASMK 676


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 174/635 (27%), Positives = 295/635 (46%), Gaps = 90/635 (14%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           +L R+R   R   E + + +  A+ +A + + A+  F  +     C   ++S N++L+  
Sbjct: 71  LLPRLRHRPRFS-ESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAF 129

Query: 165 IQEGLYHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           ++   +  A  F+  + + A    I PN  T+N+V++++C  G +D A+ LF  +  R  
Sbjct: 130 VRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQV 189

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
            PD  TY TLM GL K++RLD A+ LLDEM   G  P  V +N L+ G  K GE  +  +
Sbjct: 190 APDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMR 249

Query: 284 LVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           + D +    G  PN  TYN ++ GLC  G   +   + +RMVA+   P+ +TYG +I+GL
Sbjct: 250 VWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGL 309

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ---------- 392
            + G     ARV   + +    ++  +Y++L+ G  + G+ ++A K W            
Sbjct: 310 CRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLR 369

Query: 393 ---MMEKG----------------------CKPNTVV----------------------- 404
              +M KG                      C P+TV                        
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429

Query: 405 ------------YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
                       YS++I+GLC VG+  +A ++  +M  +GC  N+  Y++L+ GF +  +
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYR 489

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              AV I+  MA N C    + Y+ LI GLC+  K +EA  V  +M+  G  PD+  Y S
Sbjct: 490 TSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGS 549

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I GL +   +++AL ++ ++L    K   DV  +NIL++ LC    +  ++ + + M +
Sbjct: 550 LIRGLFSDKKIDDALSIWKQILYKGLKV--DVMMHNILIHGLCSAGKVDEALHVFSDMKE 607

Query: 573 -RGCDPDLVTCNIFLTALKEKLEAPQDGT-------DFLNELAIRLFKR-------QRTS 617
            + C P+LVT N  +  L E     +  T       D L    I    R        R  
Sbjct: 608 KKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIH 667

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
            G ++++ +L + + P   TW  +V+ + +   IQ
Sbjct: 668 EGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 221/467 (47%), Gaps = 35/467 (7%)

Query: 197 LVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           +V+    R  + D A+  FR +P +  C P I ++  L+D   +  R  +A      +  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLS- 146

Query: 256 DGCF-----PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            G F     P   T+N+++  LC  G+L RA  L D++  +   P+ +TY+TL+ GL  +
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQ 206

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-EERKFHVNEYI 369
             LD A+ LLD M  S   P+ V Y  ++ G  K G      RV   + ++     N   
Sbjct: 207 DRLDHALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ ++ GL K G+ ++  ++W++M+    +P+ + Y  LI GLCR G  D A  +  E+I
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +A  Y+SL+KGF ++G+  +A + W D A    + N   Y+++I GL + G + 
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW-DSAGFAGLRNLRTYNIMIKGLFDSGMVD 385

Query: 490 EARMVWTQMLSR--GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           EA  +W  +L +   C PD V + ++IHGLC  G   +A  +F E        Q DVF+Y
Sbjct: 386 EAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARV--SGKQLDVFSY 442

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           + ++N LC    +  ++ +   M   GC P+                     +   N L 
Sbjct: 443 SSMINGLCNVGRLVDAVKVYEKMDKDGCKPN---------------------SHIYNALI 481

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               +  RTS   +I   M     SP   T+  ++  LC+ ++ Q A
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA 528



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 135/273 (49%), Gaps = 5/273 (1%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
           ++   QL   ++ S+I    N G       V  +M ++        +  +   + + +  
Sbjct: 431 RVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRT 490

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
            +A+R++  M D   C  TV ++N++++ + +   Y  A      +V        P+  T
Sbjct: 491 SDAVRIYSKMADN-GCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN---GFTPDITT 546

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM- 253
           +  +I+ +     +D+A+ +++++  +  + D+  +  L+ GLC   ++DEA+ +  +M 
Sbjct: 547 YGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK 606

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +   C P  VT+N L++GL + G + +AA L  ++   G  P+ ++YNT I GLC    +
Sbjct: 607 EKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRI 666

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            + + LLD +++   +P  +T+  ++  ++K G
Sbjct: 667 HEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  258 bits (659), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 143/416 (34%), Positives = 215/416 (51%), Gaps = 38/416 (9%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TF+++I  + + G++  A  L +E     C  DI+TY T++D L K  ++ EAV L++++
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK--- 310
             +GC PT  T+N L+NGLCK G L  A  L+  +   GC P+ VTY +LI GL  K   
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 311 --------------------------------GNLDKAVSLLDRMVASKCMPNEVTYGTI 338
                                           G + +A S+   M +  C+P+ VT  T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+GL K GR     R+  SME R    NE +YS LI GL K  K + A+++  QM +  C
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+T+ Y+ LIDGLC+ G    A     EM+  GC  + +TY+ L+ GF ++G    A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++ DM+ + C  N V Y  LI GLC+  +L +A + +  M  RGC PD   YSS++ GLC
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            +G +E    LF+EM   E     +  T   L+  LCK + +  ++ L N++   G
Sbjct: 361 KSGKLEGGCMLFDEM---ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG 413



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 125/382 (32%), Positives = 201/382 (52%), Gaps = 6/382 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P   T+N ++  +C++G ++ AI L R++    C PD+ TY +L+DGL K+ R  EA  L
Sbjct: 67  PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKL 126

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM   G     V +  LI GL + G++ +A+ +   M  +GC+P+ VT +T+I GLC 
Sbjct: 127 FKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCK 186

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +  AV +   M A    PNEV Y  +I+GL K  R +D A  +++  ++ F   + I
Sbjct: 187 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK-ARKMDCALEMLAQMKKAFCTPDTI 245

Query: 370 -YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ LI GL K G    A   + +M+E GCKP+   Y+ LI G C+ G  D A  +  +M
Sbjct: 246 TYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDM 305

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            ++ C+ N  TY +L+ G  +  +  KA   ++ M +  C  +   YS L+ GLC+ GKL
Sbjct: 306 SSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKL 365

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
               M++ +M   G   +    + +I  LC A  V+EA+ LFN    +  +  P  + YN
Sbjct: 366 EGGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNA---IRKEGMPHPYAYN 421

Query: 549 ILLNALCKQSNISHSIDLLNSM 570
            +++AL K   ++    +   M
Sbjct: 422 SIISALIKSGKVNEGQAVYQEM 443



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 189/365 (51%), Gaps = 6/365 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +EEAI L   +VD   C   V ++ S+++ +   G   R+ E Y          +  +T+
Sbjct: 85  LEEAIDLLRKIVDN-GCTPDVVTYTSLIDGL---GKKKRSFEAYKLFKEMASRGLALDTV 140

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +  +I+ + + G +  A  +++ M  + C PD+ T  T++DGLCK  R+  AV +   M
Sbjct: 141 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 200

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G  P  V ++ LI+GLCK  ++  A +++  M    C P+ +TYN LI GLC  G++
Sbjct: 201 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDV 260

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A +  D M+ + C P+  TY  +I+G  K G       V   M   +   N   Y TL
Sbjct: 261 AAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTL 320

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ISGL K  +   A   ++ M E+GC P++ VYS+L+DGLC+ GK  E   +LF+ +    
Sbjct: 321 ISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKL-EGGCMLFDEMERSG 379

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
            AN+ T + L+    ++ +  +AV ++  + K   + +   Y+ +I  L + GK+ E + 
Sbjct: 380 VANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNEGQA 438

Query: 494 VWTQM 498
           V+ +M
Sbjct: 439 VYQEM 443



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 23/285 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S LI+GL K G    A  L ++    GC  +   Y+ ++D L +  K  EA  ++ ++ 
Sbjct: 2   FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            NGC     TY++L+ G  + G+  +A+++ + +  N C  + V Y+ LI GL +  +  
Sbjct: 62  ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  ++ +M SRG   D V Y+++I GL  AG + +A  ++  M        PDV T + 
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMT--SQGCVPDVVTLST 179

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +++ LCK   I  ++ +  SM  RG  P+ V  +  +  L                    
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL-------------------- 219

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             K ++     +++  M + F +P T T+  ++  LC+   + AA
Sbjct: 220 -CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAA 263



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 23/252 (9%)

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            +S LI+GL + G   +A  +  E   NGC  +  TY++++    ++ K  +AV + + +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
             N C      Y+ L++GLC+ G+L EA  +  +++  GC PDVV Y+S+I GL      
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            EA KLF EM         D   Y  L+  L +   I  +  +  +M  +GC PD+VT +
Sbjct: 121 FEAYKLFKEMA--SRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLS 178

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
             +  L    +A + G       A+R+FK     G            L+P    +  ++ 
Sbjct: 179 TMIDGL---CKAGRIGA------AVRIFKSMEARG------------LAPNEVVYSALIH 217

Query: 644 ELCRPKRIQAAI 655
            LC+ +++  A+
Sbjct: 218 GLCKARKMDCAL 229


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  258 bits (658), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 167/609 (27%), Positives = 298/609 (48%), Gaps = 58/609 (9%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           S E F S    G+++    T+ ++I     + +   +  +L +M+ E     ++ F F+ 
Sbjct: 57  SLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQFVI 116

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           K Y +++L E+ +++F+  + EF C+ +VK +N VL+ ++ + L+      YN   N K 
Sbjct: 117 KCYRRSNLGEQGLKMFYR-IREFGCEPSVKIYNLVLDALLSQNLFKMINALYN---NMKS 172

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT------------- 232
             + PN  T+N+++K +C+ G VD A +L  EM  + C+PD  +Y T             
Sbjct: 173 EGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDK 232

Query: 233 -----------------LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                            L+ G+CKE R  EA  L++EM   G  P  ++++ +I+ L   
Sbjct: 233 ARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDM 292

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G +  +  +   MF++GC PN  T+ +LI G  ++G +  AV L + M+     PN V Y
Sbjct: 293 GNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAY 352

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+I+GL   G   +   V   ME+     N   YST+I G  K G    A + W +M+ 
Sbjct: 353 NTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMIN 412

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            GC+PN VVY+ ++D LC++   D+A +++  MI++GC     T+++ +KG   +G+   
Sbjct: 413 CGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEW 472

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ +   M K  C+ N   Y+ L+ GL      REA  +  ++  R  + D V Y+++++
Sbjct: 473 AMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMY 532

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM-MDRG 574
           G    G  ++ L+L  +ML    K   D  T N  +NA CK   +  +I +L+++  ++ 
Sbjct: 533 GFSFNGMHQQVLQLLGKMLVNGIKL--DTITVNTTVNAYCKLGKVKTAIKVLDNISAEKE 590

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
              D++T  I L  +   L   ++   +L+E                    ML++ + P 
Sbjct: 591 FRADIITHTIILWGICNWL-GTEEAVVYLHE--------------------MLKRGIFPN 629

Query: 635 TSTWERVVQ 643
            +TW  +V+
Sbjct: 630 IATWNVLVR 638



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 243/505 (48%), Gaps = 81/505 (16%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNA---KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           V+ V+ QE     +LE++  + N+   KH +     LT+  +I  + R   +D    L +
Sbjct: 44  VVKVLRQEHDIVSSLEYFKSLSNSGTFKHTH-----LTYETMIDKLGRNNEMDGVSYLLQ 98

Query: 217 EMPVRN--CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           +M + N  C  +++ +  ++    + N  ++ + +   ++  GC P+   +N++++ L  
Sbjct: 99  QMKLENVPCSQELFQF--VIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLS 156

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
                    L +NM  +G  PN  TYN L+  LC  G +D A  LL  M    C P++V+
Sbjct: 157 QNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVS 216

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y T+I+ + KLG  VD AR L      KF     +Y+ LI G+ KE + ++A  L  +M+
Sbjct: 217 YTTVISSMCKLGD-VDKAREL----AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMV 271

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           ++G  PN + YS +I  L  +G  + +  +   M   GC  N  T++SL+KGFF      
Sbjct: 272 DRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVR---- 327

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
                                          G++ +A  +W  M+  G  P+VVAY+++I
Sbjct: 328 -------------------------------GRVGDAVGLWNLMIREGVSPNVVAYNTLI 356

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           HGLC+ G+++EA+ ++N+M   E  S +P+V TY+ ++    K  ++  + +  N M++ 
Sbjct: 357 HGLCSDGNMDEAISVWNQM---EKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINC 413

Query: 574 GCDPDLV--TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
           GC P++V  TC +                D L +++  +F +      F +++ M+    
Sbjct: 414 GCRPNVVVYTCMV----------------DVLCQMS--MFDQ-----AFDLIDNMISDGC 450

Query: 632 SPQTSTWERVVQELCRPKRIQAAIN 656
            P   T+   ++ LCR  R++ A+N
Sbjct: 451 PPTVITFNNFIKGLCRAGRVEWAMN 475



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 161/341 (47%), Gaps = 40/341 (11%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C+  V++F S++      G    A+  +N ++      + PN + +N +I  +C  G +D
Sbjct: 310 CRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIRE---GVSPNVVAYNTLIHGLCSDGNMD 366

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
            AI ++ +M   +  P++ TY T++ G  K   L  A    ++M   GC P  V +  ++
Sbjct: 367 EAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMV 426

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           + LC+     +A  L+DNM   GC P  +T+N  I GLC  G ++ A+++LD+M   +C+
Sbjct: 427 DVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECL 486

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PN  TY  +++GL +     +   ++  +EERK   +   Y+T++ G    G  +  ++L
Sbjct: 487 PNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQL 546

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGK-------------------------------- 417
             +M+  G K +T+  +  ++  C++GK                                
Sbjct: 547 LGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGIC 606

Query: 418 ----PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
                +EA   L EM+  G   N  T++ L++GFF S  GH
Sbjct: 607 NWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFF-SKLGH 646



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/312 (20%), Positives = 120/312 (38%), Gaps = 75/312 (24%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + +LI    + G+      V  +M ++       ++  I   + K+  +  A   ++ M
Sbjct: 351 AYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKM 410

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           ++   C+  V  +  +++V+ Q  ++ +A +  +++++       P  +TFN  IK +CR
Sbjct: 411 IN-CGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISD---GCPPTVITFNNFIKGLCR 466

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA------------------ 246
            G V+ A+ +  +M    C P+I TY  L+DGL + N   EA                  
Sbjct: 467 AGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVT 526

Query: 247 -----------------VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN-- 287
                            + LL +M V+G     +T N  +N  CK G++  A K++DN  
Sbjct: 527 YNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNIS 586

Query: 288 ----------------------------------MFLKGCLPNEVTYNTLIHGLCLKGNL 313
                                             M  +G  PN  T+N L+ G   K   
Sbjct: 587 AEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGFFSKLGH 646

Query: 314 DKAVSLLDRMVA 325
              + +LD ++ 
Sbjct: 647 MGPIRILDDIIG 658


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 158/527 (29%), Positives = 273/527 (51%), Gaps = 24/527 (4%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++AI LF  M+        V  F+   + +     ++  L+F   +   +   I  N  T
Sbjct: 47  DDAIDLFQEMIRSRPLPSLV-DFSRFFSGVASTKQFNLVLDFCKKM---ELNGIAHNIYT 102

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N++I   CR      A  +  ++     EPD  T+ TL++GLC E+++ EAV+L+  M 
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +GC P  VT+N ++NG+CK+G+   A  L+  M  +    +  TY+T+I  LC  G +D
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A+SL   M       + VTY +++ GL K G+  DG ++L  M  RK   N   ++ LI
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
               KEGK ++A +L+K+M+ KG  PNT+ Y++L+DG C   +  EA  +L  M+ N C+
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  T++SL+KG+ +  +  + +++++ ++K   V N V YS+L+ G C+ GKL  A  +
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           + +M+S G  PDV+ Y  ++ GLC+ G +E+AL++F ++   + K   D+  Y I++  +
Sbjct: 403 FQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL--QKSKMNLDIVMYTIIIEGM 460

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVT----------------CNIFLTALKEKLEAPQD 598
           CK   +  + +L  S+  +G  P+++T                 NI L  ++E    P D
Sbjct: 461 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPND 520

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            T   N L     +    +   K++E M     S   S+ + V+  L
Sbjct: 521 CT--YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 245/466 (52%), Gaps = 20/466 (4%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN+++N +  E     A+     +V        PN +T+N ++  +C+ G    A+ L 
Sbjct: 137 TFNTLINGLCLESKVSEAVVLVARMV---ENGCQPNVVTYNSIVNGICKSGDTSLALDLL 193

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R+M  RN + D++TY T++D LC++  +D A+ L  EM+  G   + VT+N L+ GLCK 
Sbjct: 194 RKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKA 253

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+     +L+ +M  +  +PN +T+N LI     +G L +A  L   M+     PN +TY
Sbjct: 254 GKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITY 313

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++++G     R  +   +L  M       +   +++LI G  K  + ++ MKL++++ +
Sbjct: 314 NSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISK 373

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +G   NTV YS L+ G C+ GK + AEE+  EM++ G   +  TY  L+ G  ++GK  K
Sbjct: 374 RGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEK 433

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+EI++D+ K+    + V Y+++I G+C+ GK+ +A  ++  +  +G KP+V+ Y+ MI 
Sbjct: 434 ALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 493

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  GS+ EA  L  +M   E  ++P+  TYN L+ A  +  +++ S  L+  M   G 
Sbjct: 494 GLCKKGSLSEANILLRKM--EEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 551

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFK 621
             D  +  + +  L                 A+  FK  R S G K
Sbjct: 552 SADASSIKMVIDMLSS---------------AVWWFKEPRRSPGVK 582



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 164/342 (47%), Gaps = 23/342 (6%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A+ L   M+ S+ +P+ V +    +G+    +          ME      N Y  + +
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+   +  K   A  +  ++M+ G +P+T  ++ LI+GLC   K  EA  ++  M+ NGC
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  TY+S++ G  +SG    A+++ + M + N   +   YS +I  LC DG +  A  
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M ++G K  +V Y+S++ GLC AG   + ++L  +M     K  P+V T+N+L++ 
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMT--SRKIIPNVITFNVLIDV 284

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
             K+  +  + +L   M+ +G  P+ +T N  +           DG    N         
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLM-----------DGYCMQN--------- 324

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            R S    ++++M++   SP   T+  +++  C+ KR+   +
Sbjct: 325 -RLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 18/290 (6%)

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K +DA+ L+++M+     P+ V +S    G+    + +   +   +M  NG A N +T +
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            ++  F    K   A  +   + K     +   ++ LI+GLC + K+ EA ++  +M+  
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC+P+VV Y+S+++G+C +G    AL L  +M   E   + DVFTY+ ++++LC+   I 
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKM--DERNVKADVFTYSTIIDSLCRDGCID 222

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------ 609
            +I L   M  +G    LVT N  +  L  K     DG   L ++  R            
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLC-KAGKWNDGVQLLKDMTSRKIIPNVITFNVL 281

Query: 610 ---LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                K  +     ++ + M+ K +SP T T+  ++   C   R+  A N
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANN 331



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 140/313 (44%), Gaps = 45/313 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  Y           +L  M R        +F  + K Y K   V+E ++LF   
Sbjct: 312 TYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRK- 370

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                              I + GL                   + NT+T++++++  C+
Sbjct: 371 -------------------ISKRGL-------------------VANTVTYSILVQGFCQ 392

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A +LF+EM      PD+ TY  L+DGLC   +L++A+ + +++Q        V 
Sbjct: 393 SGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVM 452

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + ++I G+CK G++  A  L  ++  KG  PN +TY  +I GLC KG+L +A  LL +M 
Sbjct: 453 YTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 512

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL------F 378
                PN+ TY T+I   ++ G     A+++  M+   F  +      +I  L      F
Sbjct: 513 EDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVWWF 572

Query: 379 KEGKAEDAMKLWK 391
           KE +    +K ++
Sbjct: 573 KEPRRSPGVKRFR 585


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 153/493 (31%), Positives = 255/493 (51%), Gaps = 41/493 (8%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++A+ LF  M+       TV  FN + + I +   Y   L     +   +   I  +  T
Sbjct: 70  DDAVDLFRDMIQSRPLP-TVIDFNRLFSAIAKTKQYELVLALCKQM---ESKGIAHSIYT 125

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            +++I   CR   +  A     ++     EPD   + TL++GLC E R+ EA+ L+D M 
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY-------------- 300
             G  PT +T N L+NGLC NG++  A  L+D M   G  PNEVTY              
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245

Query: 301 ---------------------NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
                                + +I GLC  G+LD A +L + M       + +TY T+I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            G    GR  DGA++L  M +RK   N   +S LI    KEGK  +A +L K+MM++G  
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PNT+ Y++LIDG C+  + +EA +++  MI+ GC  +  T++ L+ G+ ++ +    +E+
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           +++M+    + N V Y+ L+ G C+ GKL  A+ ++ +M+SR  +PD+V+Y  ++ GLC+
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G +E+AL++F ++   + K + D+  Y I+++ +C  S +  + DL  S+  +G   D 
Sbjct: 486 NGELEKALEIFGKI--EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543

Query: 580 VTCNIFLTALKEK 592
              NI ++ L  K
Sbjct: 544 RAYNIMISELCRK 556



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 226/456 (49%), Gaps = 41/456 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V +A+ L   MV+       V ++  VLNV+ + G    A+E    +   +  NI  + +
Sbjct: 209 VSDAVVLIDRMVETGFQPNEV-TYGPVLNVMCKSGQTALAMELLRKM---EERNIKLDAV 264

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            ++++I  +C+ G +DNA  LF EM ++  + DI TY TL+ G C   R D+   LL +M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  VTF+VLI+   K G+L  A +L+  M  +G  PN +TYN+LI G C +  L
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           ++A+ ++D M++  C P+ +T+  +ING  K  R  DG  +   M  R    N   Y+TL
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + G  + GK E A KL+++M+ +  +P+ V Y  L+DGLC                    
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC-------------------- 484

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                          ++G+  KA+EI+  + K+    +   Y ++IHG+C   K+ +A  
Sbjct: 485 ---------------DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  +  +G K D  AY+ MI  LC   S+ +A  LF +M   E    PD  TYNIL+ A
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM--TEEGHAPDELTYNILIRA 587

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                + + + +L+  M   G   D+ T  + +  L
Sbjct: 588 HLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 133/447 (29%), Positives = 227/447 (50%), Gaps = 23/447 (5%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D+A+ LFR+M      P +  +  L   + K  + +  + L  +M+  G   +  T +++
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           IN  C+  +L  A   +  +   G  P+ V +NTL++GLCL+  + +A+ L+DRMV    
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P  +T  T++NGL   G+  D   ++  M E  F  NE  Y  +++ + K G+   AM+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L ++M E+  K + V YS +IDGLC+ G  D A  +  EM   G  A+  TY++L+ GF 
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            +G+     ++ +DM K     N V +SVLI    ++GKLREA  +  +M+ RG  P+ +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+S+I G C    +EEA+++ + M  +     PD+ T+NIL+N  CK + I   ++L  
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLM--ISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
            M  RG   + VT N  +          Q G     E+A +LF+             M+ 
Sbjct: 428 EMSLRGVIANTVTYNTLVQGF------CQSGK---LEVAKKLFQE------------MVS 466

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAAI 655
           + + P   +++ ++  LC    ++ A+
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKAL 493


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 228/404 (56%), Gaps = 2/404 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P  +TF  +I  +C++G    A++LF +M  + C+PD+YTY T+++GLCK      
Sbjct: 157 LGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAA 216

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  LL +M+  GC P  VT++ LI+ LC++  +  A  +   M  KG  P+  TY +LI 
Sbjct: 217 AAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQ 276

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC      +A +LL+ M +   MP+ VT+  +++   K G+  +   VL +M E     
Sbjct: 277 GLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEP 336

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   YS+L+ G        +A KL+  M+ KGCKPN   Y+ LI+G C+  + DEA ++ 
Sbjct: 337 NVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLF 396

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EMI+ G   N  +Y++L+ GF + GK  +A +++++M  N  + +   YS+L+ G C+ 
Sbjct: 397 NEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQ 456

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L +A  ++  M S   KP++V Y+ ++H +C +G+ ++A KLF+E+       QP V 
Sbjct: 457 GYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFV--QGLQPHVQ 514

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            Y  ++N LCK+  +  +++   +M   GC PD ++ N+ +  L
Sbjct: 515 LYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGL 558



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 207/414 (50%), Gaps = 4/414 (0%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +     K     +A+ LF  MV +  C+  V ++N+++N + + G    A      
Sbjct: 165 TFTTLINGLCKVGEFAQAVELFDDMVAK-GCQPDVYTYNTIINGLCKIGETAAAAGLLKK 223

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  A      PN +T++ +I ++CR  LV+ A+ +F  M  +   PDI+TY +L+ GLCK
Sbjct: 224 MEEA---GCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCK 280

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            +R  EA  LL+EM      P  VTFNVL++  CK G++  A  ++  M   G  PN VT
Sbjct: 281 FSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y++L++G  L  ++ +A  L   M+   C PN  +Y  +ING  K  R  +  ++   M 
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMI 400

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    N   Y+TLI G  + GK  +A  L++ M   G  P+   YS L+DG C+ G   
Sbjct: 401 HQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLG 460

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A  +   M +     N   Y+ L+    +SG    A +++ ++       +   Y+ +I
Sbjct: 461 KAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTII 520

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +GLC++G L EA   +  M + GC PD ++Y+ +I GL        AL L  EM
Sbjct: 521 NGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEM 574



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 175/346 (50%), Gaps = 24/346 (6%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEYIY 370
           N+D A++  + M+  K +P  + +  +++ +VK+G+  D    L   ME      N Y  
Sbjct: 72  NIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTL 131

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S  ++   +  + +    +  ++++ G +P  V ++ LI+GLC+VG+  +A E+  +M+ 
Sbjct: 132 SIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA 191

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC  + +TY++++ G  + G+   A  + K M +  C  N V YS LI  LC D  + E
Sbjct: 192 KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNE 251

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +++ M ++G  PD+  Y+S+I GLC     +EA  L NEM  L     PD+ T+N+L
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN--IMPDIVTFNVL 309

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           ++  CK+  +S ++ +L +M + G +P++VT +  +             TD +   A +L
Sbjct: 310 VDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSL-------WTDVVE--ARKL 360

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           F             VM+ K   P   ++  ++   C+ KRI  A+ 
Sbjct: 361 F------------HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 168/342 (49%), Gaps = 39/342 (11%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +  LV EA+ +F  M  +      + ++ S++  + +   +  A    N + +   +NI+
Sbjct: 245 RDRLVNEALDIFSYMKAK-GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTS---LNIM 300

Query: 190 PNTLTFNLVIKTVCRLGLVDNAI-----------------------------------QL 214
           P+ +TFN+++ T C+ G V  A+                                   +L
Sbjct: 301 PDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKL 360

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           F  M  + C+P+I++Y  L++G CK  R+DEA+ L +EM   G  P  V++N LI+G C+
Sbjct: 361 FHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQ 420

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G+L  A  L  NM   G LP+  TY+ L+ G C +G L KA  L   M ++   PN V 
Sbjct: 421 LGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 480

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y  +++ + K G   D  ++   +  +    +  +Y+T+I+GL KEG  ++A++ ++ M 
Sbjct: 481 YTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNME 540

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             GC P+ + Y+ +I GL +      A  ++ EM + G  A+
Sbjct: 541 ADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIAD 582


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  257 bits (657), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/501 (30%), Positives = 254/501 (50%), Gaps = 24/501 (4%)

Query: 136 EAIRLFHTMV------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           E++ L  TMV      D   C + +K F ++ NV        R +E              
Sbjct: 103 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAV----RVMEILEKFGQ------- 151

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+   +N +I   C++  +D+A ++   M  ++  PD  TY  ++  LC   +LD A+ +
Sbjct: 152 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 211

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LD++  D C PT +T+ +LI      G +  A KL+D M  +G  P+  TYNT+I G+C 
Sbjct: 212 LDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCK 271

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G +D+A  ++  +    C P+ ++Y  ++  L+  G+  +G +++  M   K   N   
Sbjct: 272 EGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 331

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS LI+ L ++GK E+AM L K M EKG  P+   Y  LI   CR G+ D A E L  MI
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG-KL 488
           ++GC  +   Y++++    ++GK  +A+EI+  + +  C  N   Y+ +   L   G K+
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           R   M+  +M+S G  PD + Y+SMI  LC  G V++A +L  +M   E    P V TYN
Sbjct: 452 RALHMIL-EMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCE--FHPSVVTYN 508

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KEKLEAPQDGTDFLNE 605
           I+L   CK   I  +ID+L+SM+  GC P+  T  + +  +     + EA +   D +  
Sbjct: 509 IVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 568

Query: 606 LAIRLFKRQRTSGGFKIVEVM 626
            AI  +  +R    F ++ V+
Sbjct: 569 NAISEYSFKRLHRTFPLLNVL 589



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 179/336 (53%), Gaps = 4/336 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA++L   M+     K  + ++N+++  + +EG+  RA E    I N +     P+ +
Sbjct: 240 VDEALKLLDEMLSR-GLKPDMFTYNTIIRGMCKEGMVDRAFEM---IRNLELKGCEPDVI 295

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N++++ +   G  +   +L  +M    C+P++ TY  L+  LC++ +++EA+ LL  M
Sbjct: 296 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 355

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G  P   +++ LI   C+ G L  A + ++ M   GCLP+ V YNT++  LC  G  
Sbjct: 356 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 415

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A+ +  ++    C PN  +Y T+ + L   G  +    +++ M       +E  Y+++
Sbjct: 416 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSM 475

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           IS L +EG  + A +L   M      P+ V Y+ ++ G C+  + ++A ++L  M+ NGC
Sbjct: 476 ISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGC 535

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
             N  TY+ L++G   +G   +A+E+  D+ + N +
Sbjct: 536 RPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAI 571



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 147/291 (50%), Gaps = 17/291 (5%)

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           + G   +++ L + M+ KG  P+ ++ + LI G   +    +A  ++ E++      + F
Sbjct: 97  RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDVF 155

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            Y++L+ GF +  +   A  +   M   +   + V Y+++I  LC  GKL  A  V  Q+
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           LS  C+P V+ Y+ +I      G V+EALKL +EML    K  PD+FTYN ++  +CK+ 
Sbjct: 216 LSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLK--PDMFTYNTIIRGMCKEG 273

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK---LEAPQDGTDFLNE---------- 605
            +  + +++ ++  +GC+PD+++ NI L AL  +    E  +  T   +E          
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333

Query: 606 -LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            L   L +  +      ++++M +K L+P   +++ ++   CR  R+  AI
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 384


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 246/451 (54%), Gaps = 6/451 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + K     H + EA RLF  M  +  C     ++ +++  + Q G  + AL+ +  
Sbjct: 163 TYTTLIKGLCMEHRISEATRLFLRM-QKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKE 221

Query: 180 IVNAKH---MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           ++N      +N  P  +T++++I  +C++G  D A +LF EM  +   PD+ +Y TL+ G
Sbjct: 222 MLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHG 281

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C   + D++  L DEM   G  P  VTF+VLI+ LCK G++  A KL++ M  +G +PN
Sbjct: 282 FCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPN 341

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            +TYN+LI G C+ G+L+ A  L   M +    P+E++Y T+ING  K  +  +   +  
Sbjct: 342 LITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYN 401

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +     N   Y TL+ GLF++GK  DA KL+  M   G   N+ +Y   +DGLC+  
Sbjct: 402 EMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKND 461

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
              EA E+  E+ +     N   YS L+ G  ++GK   A E+++ +++     + V Y+
Sbjct: 462 CLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYN 521

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           ++IHG C+ G++  A +++ +M   GC PD++AY++++ G C    +EE +KL ++M  +
Sbjct: 522 IMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM--V 579

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           +    P+  +  I+++ LCK       +DLL
Sbjct: 580 QKDVSPNAASCTIVVDMLCKDEKYKKFVDLL 610



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 244/476 (51%), Gaps = 33/476 (6%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +PN +T+  +IK +C    +  A +LF  M    C P+  TY TL+ GLC+   ++ A+ 
Sbjct: 158 IPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALK 217

Query: 249 LLDEMQVDG------CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L  EM  D       C P  +T++++I+GLCK G    A +L + M  +G +P+ ++Y+T
Sbjct: 218 LHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYST 277

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LIHG C  G  D++  L D MV     P+ VT+  +I+ L K G+  +  ++L  M +R 
Sbjct: 278 LIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRG 337

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              N   Y++LI G    G    A +L+  M  KG +P+ + Y+ LI+G C+  K  EA 
Sbjct: 338 IVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAM 397

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +  EM+  G + N  TY +L+KG F+ GK   A +++  M       N   Y + + GL
Sbjct: 398 NLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGL 457

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C++  L EA  ++ ++ S   K ++  YS +I GLC AG +E A +LF ++   +   QP
Sbjct: 458 CKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLS--QEGLQP 515

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQDGT 600
           DV TYNI+++  CK   + ++  L   M + GC PD++  N  L    E  KLE      
Sbjct: 516 DVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEE----- 570

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                  I+L  +            M+QK +SP  ++   VV  LC+ ++ +  ++
Sbjct: 571 ------VIKLLHK------------MVQKDVSPNAASCTIVVDMLCKDEKYKKFVD 608



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 4/260 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI  +   GD  S   +   M  +     E S+  +   Y K   V+EA+ L++ M
Sbjct: 344 TYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM 403

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +      V ++ ++L  + Q+G    A + +  +   K   +  N+  + + +  +C+
Sbjct: 404 L-QVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM---KTYGVSANSQIYGIFLDGLCK 459

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +  A++LF E+   N + +I  Y  L+DGLCK  +L+ A  L +++  +G  P  VT
Sbjct: 460 NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVT 519

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N++I+G CK G++  A  L + M   GC P+ + YNTL+ G C    L++ + LL +MV
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579

Query: 325 ASKCMPNEVTYGTIINGLVK 344
                PN  +   +++ L K
Sbjct: 580 QKDVSPNAASCTIVVDMLCK 599


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 256/493 (51%), Gaps = 41/493 (8%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++A+ LF  M       R +  F+ + +V+ +   Y   L+    +   +   I  N  T
Sbjct: 54  DDAVDLFQEMTRSRPRPRLI-DFSRLFSVVARTKQYDLVLDLCKQM---ELKGIAHNLYT 109

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            +++I   CR   +  A     ++     EPD  T+ TL++GLC E R+ EA+ L+D M 
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY-------------- 300
             G  PT +T N L+NGLC NG++  A  L+D M   G  PNEVTY              
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 301 ---------------------NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
                                + +I GLC  G+LD A +L + M       + + Y T+I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            G    GR  DGA++L  M +RK   +   +S LI    KEGK  +A +L K+M+++G  
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+TV Y++LIDG C+  + D+A  +L  M++ GC  N  T++ L+ G+ ++      +E+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           ++ M+    V + V Y+ LI G CE GKL  A+ ++ +M+SR  +PD+V+Y  ++ GLC+
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G  E+AL++F ++   + K + D+  YNI+++ +C  S +  + DL  S+  +G  PD+
Sbjct: 470 NGEPEKALEIFEKI--EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527

Query: 580 VTCNIFLTALKEK 592
            T NI +  L +K
Sbjct: 528 KTYNIMIGGLCKK 540



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 255/516 (49%), Gaps = 25/516 (4%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEE 136
            +Q  + T+  +++    SG   +L M L R   E+++ L+   +  I     K   ++ 
Sbjct: 207 GFQPNEVTYGPVLKVMCKSGQ-TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDN 265

Query: 137 AIRLFHTM-VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           A  LF+ M +  F  K  +  + +++      G +    +    ++  K   I P+ + F
Sbjct: 266 AFNLFNEMEIKGF--KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK---ITPDVVAF 320

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           + +I    + G +  A +L +EM  R   PD  TY +L+DG CKEN+LD+A  +LD M  
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            GC P   TFN+LING CK   +    +L   M L+G + + VTYNTLI G C  G L+ 
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  L   MV+ +  P+ V+Y  +++GL   G       +   +E+ K  ++  IY+ +I 
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G+    K +DA  L+  +  KG KP+   Y+ +I GLC+ G   EA+ +  +M  +G + 
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  TY+ L++     G   K+ ++ +++ +  C ++            +   LR A    
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKR--CGFS-----------VDASTLRFALSTL 607

Query: 496 TQMLSRGCKPDVVAYSSMIHGLC--NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
            +ML  G +PDV  +++++   C     SV +A  LF  M  +  K  P+V TYN ++  
Sbjct: 608 ARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYK--PNVVTYNTVIKG 665

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           L   + IS    +L+ M +RGC P+ VT + F++ L
Sbjct: 666 LLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGL 701



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 241/478 (50%), Gaps = 6/478 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ L   MV+  H K T+ + N+++N +   G    A+   + +V        PN +
Sbjct: 158 VSEALELVDRMVEMGH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVET---GFQPNEV 213

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  V+K +C+ G    A++L R+M  R  + D   Y  ++DGLCK+  LD A  L +EM
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           ++ G     + +  LI G C  G     AKL+ +M  +   P+ V ++ LI     +G L
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L   M+     P+ VTY ++I+G  K  +      +L  M  +    N   ++ L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G  K    +D ++L+++M  +G   +TV Y+ LI G C +GK + A+E+  EM++   
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  +Y  L+ G  ++G+  KA+EI++ + K+    +   Y+++IHG+C   K+ +A  
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  +  +G KPDV  Y+ MI GLC  GS+ EA  LF +M   E    P+  TYNIL+ A
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM--EEDGHSPNGCTYNILIRA 571

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
              + + + S  L+  +   G   D  T    L+ L   L+A  +   F     +R F
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPF 629



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/407 (25%), Positives = 186/407 (45%), Gaps = 28/407 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            F +LI  +   G  +  E +   M +        ++  +   + K + +++A  +   M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +  C   +++FN ++N   +  L    LE +  +       ++ +T+T+N +I+  C 
Sbjct: 379 VSK-GCGPNIRTFNILINGYCKANLIDDGLELFRKM---SLRGVVADTVTYNTLIQGFCE 434

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           LG ++ A +LF+EM  R   PDI +Y  L+DGLC     ++A+ + ++++          
Sbjct: 435 LGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N++I+G+C   ++  A  L  ++ LKG  P+  TYN +I GLC KG+L +A  L  +M 
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE----------------- 367
                PN  TY  +I   +  G A   A+++  ++   F V+                  
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAG 614

Query: 368 -----YIYSTLISGLFKEGKAE--DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                + ++TL+     E  A   DA  L+K M   G KPN V Y+ +I GL       +
Sbjct: 615 HEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQ 674

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
              +L +M   GC  NA T S+ + G  +      A+ + + M  +N
Sbjct: 675 VPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKMENDN 721



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 25/342 (7%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D AV L   M  S+  P  + +  + + + +  +      +   ME +    N Y  S +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+   +  K   A     ++++ G +P+TV +S LI+GLC  G+  EA E++  M+  G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                T ++L+ G   +GK   AV +   M +     NEV Y  ++  +C+ G+   A  
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           +  +M  R  K D V YS +I GLC  GS++ A  LFNEM   E K  + D+  Y  L+ 
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM---EIKGFKADIIIYTTLIR 290

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             C          LL  M+ R   PD+V  +  +               F+ E  +R  +
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC-------------FVKEGKLREAE 337

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   ++ + M+Q+ +SP T T+  ++   C+  ++  A
Sbjct: 338 --------ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 14/190 (7%)

Query: 404 VYSALIDGLCRVG------------KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           V+S++ DG  +V             K D+A ++  EM  +        +S L      + 
Sbjct: 27  VFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTK 86

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +    +++ K M      +N    S++I+  C   KL  A     +++  G +PD V +S
Sbjct: 87  QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           ++I+GLC  G V EAL+L + M  +E   +P + T N L+N LC    +S ++ L++ M+
Sbjct: 147 TLINGLCLEGRVSEALELVDRM--VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204

Query: 572 DRGCDPDLVT 581
           + G  P+ VT
Sbjct: 205 ETGFQPNEVT 214



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 133/320 (41%), Gaps = 46/320 (14%)

Query: 37  RFFSVRSAVSSNKQMETEPQGNAK-SEQPFSDEIFNST------PKLGSYQLGDSTFYSL 89
           R  S+R  V+      T  QG  +  +   + E+F         P + SY++       L
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI-------L 463

Query: 90  IQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFH 149
           +    ++G+ +    +  ++ + K  +    +  I      A  V++A  LF ++  +  
Sbjct: 464 LDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-G 522

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
            K  VK++N ++  + ++G    A   +  +    H    PN  T+N++I+     G   
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHS---PNGCTYNILIRAHLGEGDAT 579

Query: 210 NAIQLFREMPVRNC------------------------EPDIYTYCTLMDGLCKENRLD- 244
            + +L  E  ++ C                        EPD++T+ TL+   C E     
Sbjct: 580 KSAKLIEE--IKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASV 637

Query: 245 -EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +A  L   M+  G  P  VT+N +I GL     + +   ++D MF +GC PN VT +T 
Sbjct: 638 YDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTF 697

Query: 304 IHGLCLKGNLDKAVSLLDRM 323
           I GLC +     A+ LL +M
Sbjct: 698 ISGLCKQDLHGSAILLLRKM 717


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 156/493 (31%), Positives = 256/493 (51%), Gaps = 41/493 (8%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++A+ LF  M       R +  F+ + +V+ +   Y   L+    +   +   I  N  T
Sbjct: 54  DDAVDLFQEMTRSRPRPRLI-DFSRLFSVVARTKQYDLVLDLCKQM---ELKGIAHNLYT 109

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            +++I   CR   +  A     ++     EPD  T+ TL++GLC E R+ EA+ L+D M 
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY-------------- 300
             G  PT +T N L+NGLC NG++  A  L+D M   G  PNEVTY              
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 301 ---------------------NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
                                + +I GLC  G+LD A +L + M       + + Y T+I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            G    GR  DGA++L  M +RK   +   +S LI    KEGK  +A +L K+M+++G  
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+TV Y++LIDG C+  + D+A  +L  M++ GC  N  T++ L+ G+ ++      +E+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           ++ M+    V + V Y+ LI G CE GKL  A+ ++ +M+SR  +PD+V+Y  ++ GLC+
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G  E+AL++F ++   + K + D+  YNI+++ +C  S +  + DL  S+  +G  PD+
Sbjct: 470 NGEPEKALEIFEKI--EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527

Query: 580 VTCNIFLTALKEK 592
            T NI +  L +K
Sbjct: 528 KTYNIMIGGLCKK 540



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 234/458 (51%), Gaps = 6/458 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ L   MV+  H K T+ + N+++N +   G    A+   + +V        PN +
Sbjct: 158 VSEALELVDRMVEMGH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ---PNEV 213

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  V+K +C+ G    A++L R+M  R  + D   Y  ++DGLCK+  LD A  L +EM
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           ++ G     + +  LI G C  G     AKL+ +M  +   P+ V ++ LI     +G L
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L   M+     P+ VTY ++I+G  K  +      +L  M  +    N   ++ L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G  K    +D ++L+++M  +G   +TV Y+ LI G C +GK + A+E+  EM++   
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  +Y  L+ G  ++G+  KA+EI++ + K+    +   Y+++IHG+C   K+ +A  
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  +  +G KPDV  Y+ MI GLC  GS+ EA  LF +M   E    P+  TYNIL+ A
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM--EEDGHSPNGCTYNILIRA 571

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
              + + + S  L+  +   G   D  T  + +  L +
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 25/342 (7%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D AV L   M  S+  P  + +  + + + +  +      +   ME +    N Y  S +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+   +  K   A     ++++ G +P+TV +S LI+GLC  G+  EA E++  M+  G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                T ++L+ G   +GK   AV +   M +     NEV Y  ++  +C+ G+   A  
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           +  +M  R  K D V YS +I GLC  GS++ A  LFNEM   E K  + D+  Y  L+ 
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM---EIKGFKADIIIYTTLIR 290

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             C          LL  M+ R   PD+V  +  +               F+ E  +R  +
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC-------------FVKEGKLREAE 337

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   ++ + M+Q+ +SP T T+  ++   C+  ++  A
Sbjct: 338 --------ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 14/190 (7%)

Query: 404 VYSALIDGLCRVG------------KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           V+S++ DG  +V             K D+A ++  EM  +        +S L      + 
Sbjct: 27  VFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTK 86

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +    +++ K M      +N    S++I+  C   KL  A     +++  G +PD V +S
Sbjct: 87  QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           ++I+GLC  G V EAL+L + M  +E   +P + T N L+N LC    +S ++ L++ M+
Sbjct: 147 TLINGLCLEGRVSEALELVDRM--VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204

Query: 572 DRGCDPDLVT 581
           + G  P+ VT
Sbjct: 205 ETGFQPNEVT 214


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 149/541 (27%), Positives = 261/541 (48%), Gaps = 41/541 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +++     GD      +   +RR +      ++  +     K   ++ A+ L   M
Sbjct: 160 TYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEM 219

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                 +  V  +N++L    + G + + +  ++ +V  K     PN  T+N+++  +C+
Sbjct: 220 -PRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLV--KDPGARPNLATYNVMLDGLCK 276

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G      +++  M   N +PD+ TY  L+ GLC+   +D A  +  E+   G       
Sbjct: 277 FGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAM 336

Query: 265 FNVLINGLCKNGELGRAAKLVD-------------NMFLKG------------------- 292
           +N L+ G C+ G +  A K  D             N+ +KG                   
Sbjct: 337 YNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEK 396

Query: 293 ---CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
              C+P+ VT+ TLIHGLC  G  +KA ++ +    S    +  +Y ++INGL  +GR V
Sbjct: 397 DVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLV 456

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           D  +V   M++     N +IY+ LISG  +  +  DA++++ +M + GC P  + Y+ LI
Sbjct: 457 DAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLI 516

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DGLC+  K  EA  +  EM+ NG   +  TY SL++G F   K   A+ IWK +      
Sbjct: 517 DGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLK 576

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLS-RGCKPDVVAYSSMIHGLCNAGSVEEALK 528
            + + +++LIHGLC  GK+ EA  V++ M   + C P++V Y++++ GL   G +++A  
Sbjct: 577 VDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAAT 636

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L+  +   E   +PD+ +YN  +  LC    I   I LL+ ++ RG  P ++T NI + A
Sbjct: 637 LWTSI--TEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRA 694

Query: 589 L 589
           +
Sbjct: 695 V 695



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 169/622 (27%), Positives = 288/622 (46%), Gaps = 89/622 (14%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E + + +  A+ +A + + A+  F  +     C   ++S N++L+  ++   +  A  F+
Sbjct: 83  ESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFF 142

Query: 178 NHIVN-AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
             + + A    I PN  T+N+V++++C  G +D A+ LF  +  R   PD  TY TLM G
Sbjct: 143 ASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCG 202

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-GCLP 295
           L K++RLD A+ LLDEM      P  V +N L+ G  K GE  +  ++ D +    G  P
Sbjct: 203 LAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARP 262

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N  TYN ++ GLC  G   +   + +RMVA+   P+ +TYG +I+GL + G     ARV 
Sbjct: 263 NLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVY 322

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ-------------MMEKG----- 397
             + +    ++  +Y++L+ G  + G+ ++A K W               +M KG     
Sbjct: 323 SEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSG 382

Query: 398 -----------------CKPNTVV-----------------------------------Y 405
                            C P+TV                                    Y
Sbjct: 383 MVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSY 442

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           S++I+GLC VG+  +A ++  +M  +GC  N+  Y++L+ GF +  +   AV I+  MA 
Sbjct: 443 SSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD 502

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
           N C    + Y+ LI GLC+  K +EA  V  +M+  G  PD+  Y S+I GL +   +++
Sbjct: 503 NGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDD 562

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD-RGCDPDLVTCNI 584
           AL ++ ++L    K   DV  +NIL++ LC    +  ++ + + M + + C P+LVT N 
Sbjct: 563 ALSIWKQILYKGLKV--DVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNT 620

Query: 585 FLTALKEKLEAPQDGT-------DFLNELAIRLFKR-------QRTSGGFKIVEVMLQKF 630
            +  L E     +  T       D L    I    R        R   G ++++ +L + 
Sbjct: 621 LMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRG 680

Query: 631 LSPQTSTWERVVQELCRPKRIQ 652
           + P   TW  +V+ + +   IQ
Sbjct: 681 IIPTVITWNILVRAVIKYGPIQ 702



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 222/467 (47%), Gaps = 35/467 (7%)

Query: 197 LVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           +V+    R  + D A+  FR +P +  C P I ++  L+D   +  R  +A      +  
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLS- 146

Query: 256 DGCF-----PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            G F     P   T+N+++  LC  G+L RA  L D++  +   P+ +TY+TL+ GL  +
Sbjct: 147 HGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQ 206

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-EERKFHVNEYI 369
             LD A+ LLD M  S+  P+ V Y  ++ G  K G      RV   + ++     N   
Sbjct: 207 DRLDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLAT 266

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ ++ GL K G+ ++  ++W++M+    +P+ + Y  LI GLCR G  D A  +  E+I
Sbjct: 267 YNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEII 326

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +A  Y+SL+KGF ++G+  +A + W D A    + N   Y+++I GL + G + 
Sbjct: 327 KTGLVIDAAMYNSLVKGFCQAGRVQEAWKFW-DSAGFAGLRNLRTYNIMIKGLFDSGMVD 385

Query: 490 EARMVWTQMLSR--GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           EA  +W  +L +   C PD V + ++IHGLC  G   +A  +F E        Q DVF+Y
Sbjct: 386 EAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARV--SGKQLDVFSY 442

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           + ++N LC    +  ++ +   M   GC P+                     +   N L 
Sbjct: 443 SSMINGLCNVGRLVDAVKVYEKMDKDGCKPN---------------------SHIYNALI 481

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               +  RTS   +I   M     SP   T+  ++  LC+ ++ Q A
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEA 528



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 135/273 (49%), Gaps = 5/273 (1%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
           ++   QL   ++ S+I    N G       V  +M ++        +  +   + + +  
Sbjct: 431 RVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRT 490

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
            +A+R++  M D   C  TV ++N++++ + +   Y  A      +V        P+  T
Sbjct: 491 SDAVRIYSKMADN-GCSPTVITYNTLIDGLCKAEKYQEASSVAREMVEN---GFTPDITT 546

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM- 253
           +  +I+ +     +D+A+ +++++  +  + D+  +  L+ GLC   ++DEA+ +  +M 
Sbjct: 547 YGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMK 606

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +   C P  VT+N L++GL + G + +AA L  ++   G  P+ ++YNT I GLC    +
Sbjct: 607 EKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRI 666

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            + + LLD +++   +P  +T+  ++  ++K G
Sbjct: 667 HEGIQLLDEVLSRGIIPTVITWNILVRAVIKYG 699


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 169/568 (29%), Positives = 278/568 (48%), Gaps = 47/568 (8%)

Query: 114 RVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII----QEGL 169
           RV+L+ S      AY   +    A ++F+ M    H K  + + N+++N ++    +  +
Sbjct: 139 RVILDTSI----GAYVACNRPHHAAQIFNRM-KRLHLKPNLLTCNTLINALVRYPSKPSV 193

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y     F + I     + +  NT TFN++I   C    +  AI L  +M   +C PD  +
Sbjct: 194 YLSKAIFSDVI----KLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVS 249

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y T++D LCK+ +L+EA  LL +M+ +G  P   TFN+L++G CK G L  AA+++D M 
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
               LP+  TYN LI GLC  G +D+A  L D M   K +P+ VTY T+ING      ++
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL 369

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
            G  ++  ME +    N   Y+ ++    KEGK ++A    ++M E G  P+ V ++ LI
Sbjct: 370 KGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLI 429

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           +G C+ G+  EA  ++ EM   G   N+ T ++++       K   A ++    +K    
Sbjct: 430 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF 489

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +EV Y  LI G  +DGK  EA  +W +M  +   P ++ Y++MI GLC++G  ++++  
Sbjct: 490 VDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDK 549

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            NE+  LE    PD  TYN ++   C++  +  +    N M+ +   PDL TCNI L  L
Sbjct: 550 LNEL--LESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGL 607

Query: 590 KEKLEAPQDGTDFLNELAIRLF-----------------------KRQRTSGGFKIVEVM 626
                     T+ + + A++LF                       K  R    F ++  M
Sbjct: 608 ---------CTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEM 658

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
            +K L P   T+  ++  L    R++ A
Sbjct: 659 EEKKLGPDCYTYNAILSALADAGRMKEA 686



 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 153/476 (32%), Positives = 251/476 (52%), Gaps = 41/476 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EAI L   M D F C     S+N++L+V+ ++G  + A +    +++ K+  +LPN  
Sbjct: 228 LSEAIGLIGKMKD-FSCFPDNVSYNTILDVLCKKGKLNEARDL---LLDMKNNGLLPNRN 283

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN+++   C+LG +  A Q+   M   N  PD++TY  L+ GLCK+ ++DEA  L DEM
Sbjct: 284 TFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEM 343

Query: 254 Q--------------VDGCF---------------------PTPVTFNVLINGLCKNGEL 278
           +              ++GCF                     P  VT+NV++    K G++
Sbjct: 344 ENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKM 403

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A   +  M   G  P+ VT+NTLI+G C  G L +A  ++D M       N VT  TI
Sbjct: 404 DNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTI 463

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           ++ L    +  D  ++L S  +R + V+E  Y TLI G FK+GK+ +AMKLW +M EK  
Sbjct: 464 LHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEI 523

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ + Y+ +I GLC  GK D++ + L E++ +G   +  TY++++ G+   G+  KA +
Sbjct: 524 IPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQ 583

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
               M K +   +    ++L+ GLC +G L +A  ++   +S+G   D V Y+++I GLC
Sbjct: 584 FHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLC 643

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
                EEA  L  EM   E K  PD +TYN +L+AL     +  + + ++ ++++G
Sbjct: 644 KEDRFEEAFDLLAEM--EEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQG 697



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 27/291 (9%)

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           V E S+  +   Y K     EA++L+  M  E     ++ ++N+++  +   G   ++++
Sbjct: 490 VDEVSYGTLIMGYFKDGKSVEAMKLWDEM-KEKEIIPSIITYNTMIGGLCHSGKTDQSID 548

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
             N ++ +    ++P+  T+N +I   CR G V+ A Q   +M  ++ +PD++T   L+ 
Sbjct: 549 KLNELLES---GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLR 605

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           GLC E  LD+A+ L +     G     VT+N +I+GLCK      A  L+  M  K   P
Sbjct: 606 GLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGP 665

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM-----------------------PNE 332
           +  TYN ++  L   G + +A   + R+V    +                       PN 
Sbjct: 666 DCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNS 725

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           VT+   IN L   G+  D   ++    ++   +++  Y +L+ GL K  K+
Sbjct: 726 VTFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKS 776



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 106/217 (48%), Gaps = 26/217 (11%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++    +EG   +A +F+N +V     +  P+  T N++++ +C  G++D A++LF
Sbjct: 564 TYNTIILGYCREGQVEKAFQFHNKMVKK---SFKPDLFTCNILLRGLCTEGMLDKALKLF 620

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                +    D  TY T++ GLCKE+R +EA  LL EM+     P   T+N +++ L   
Sbjct: 621 NTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADA 680

Query: 276 GELGRAAKLVDNMFLKGCL-----------------------PNEVTYNTLIHGLCLKGN 312
           G +  A + +  +  +G L                       PN VT++  I+ LC +G 
Sbjct: 681 GRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGK 740

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
              A+ ++          ++ TY +++ GL+K  +++
Sbjct: 741 YKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRKSI 777


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 163/547 (29%), Positives = 274/547 (50%), Gaps = 20/547 (3%)

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           I  + A G+ H   +A ++F+ M      + T+ + N++LN +++    H          
Sbjct: 131 IGAYVACGRPH---QAAQIFNRM-KRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFT 186

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           +   + +  NT +FN++I   C       AI++  +M    C PD  TY T++DGLCK+ 
Sbjct: 187 DFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKG 246

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           RL+EA  LL +M+  G FP   TFN+L+ G C+ G L  AA +++ M     +P+  TYN
Sbjct: 247 RLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYN 306

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            +I G C +G + +A+ L + M   K  P+ VTY T+ING  + G + +G +++  ME R
Sbjct: 307 VMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGR 366

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               N   Y+ ++    K+GK ++  K  ++M E GC P+ V Y+ LI   C+VGK DEA
Sbjct: 367 GMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEA 426

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             ++ EM   G   +  T +++++      K  +A ++     +     +EV Y  LI G
Sbjct: 427 FRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIG 486

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
             +  K  +A  +W +M  +   P ++ Y+SMI GLC  G   +A+   +E+L  E    
Sbjct: 487 YFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELL--ESGLV 544

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAP--- 596
           PD  TYN +++  C++  +  +    N M+++   PD+VTCN  L  L ++  LE     
Sbjct: 545 PDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKL 604

Query: 597 -----QDGTDF----LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                  G D      N + + L K +R    F ++E M +K L P   T+  ++  L  
Sbjct: 605 FNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTD 664

Query: 648 PKRIQAA 654
             R++ A
Sbjct: 665 AGRMKDA 671



 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 244/474 (51%), Gaps = 41/474 (8%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EAIR+   M D + C     ++N++L+ + ++G  + A +    +++ K+  + PN  TF
Sbjct: 215 EAIRVLGKMRD-YGCPPDNITYNTILDGLCKKGRLNEARDL---LLDMKNKGLFPNRTTF 270

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ- 254
           N+++   CRLG +  A  +   M   +  PD +TY  ++ G CK+ R+ EA+ L +EM+ 
Sbjct: 271 NILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMEN 330

Query: 255 -------------VDGCF---------------------PTPVTFNVLINGLCKNGELGR 280
                        ++GCF                     P  VT+NV++    K G++  
Sbjct: 331 LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDE 390

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
             K V  M   GCLP+ VTYNTLI   C  G +D+A  L+D M       ++VT  T++ 
Sbjct: 391 VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLR 450

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
            L +  +  +   +L S   R + V+E  Y TLI G FK  KA  A++LW +M EK   P
Sbjct: 451 ALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIP 510

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + + Y+++I GLC++GK ++A + L E++ +G   +  TY++++ G+ + G+  KA +  
Sbjct: 511 SIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFH 570

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
             M + N   + V  + L+ GLC++G L +A  ++   +S+G   D V+Y+++I  LC  
Sbjct: 571 NKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKE 630

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
               EA  L  EM   E K  PD +TYN +L  L     +  + + ++ + ++G
Sbjct: 631 KRFGEAFDLLEEM--EEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKG 682



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 204/419 (48%), Gaps = 26/419 (6%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK--NGELGRAAKLVDNMFLK-GCLPNEV 298
           R  +A  + + M+  G  PT +T N L+N L +  +    R +K V   F+K G   N  
Sbjct: 139 RPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTN 198

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           ++N LIHG C++    +A+ +L +M    C P+ +TY TI++GL K GR  +   +L+ M
Sbjct: 199 SFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDM 258

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           + +    N   ++ L+ G  + G  ++A  + + M +    P+   Y+ +I G C+ G+ 
Sbjct: 259 KNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRI 318

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA  +  EM N   + +  TY++L+ G FE G   +  ++ ++M       N V Y+V+
Sbjct: 319 AEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVM 378

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           +    + GK+ E      +M   GC PD+V Y+++I   C  G ++EA +L +EM     
Sbjct: 379 VKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMG--RK 436

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
             + D  T N +L ALC++  +  + DLL S   RG   D V+                 
Sbjct: 437 GLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSY---------------- 480

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
           GT     L I  FK ++ S   ++ + M +K + P   T+  ++  LC+  +   AI+K
Sbjct: 481 GT-----LIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDK 534



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 223/477 (46%), Gaps = 51/477 (10%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +TF  L+      G  K    V+  M +   V    ++  +   + K   + EA+RL   
Sbjct: 268 TTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREE 327

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M +       V ++N+++N   + G    + E +  I   +   + PN++T+N+++K   
Sbjct: 328 M-ENLKLSPDVVTYNTLINGCFEHG---SSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFV 383

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G +D   +  R+M    C PDI TY TL+   CK  ++DEA  L+DEM   G     V
Sbjct: 384 KKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDV 443

Query: 264 TFNVLINGLCKNGEL-----------------------------------GRAAKLVDNM 288
           T N ++  LC+  +L                                    +A +L D M
Sbjct: 444 TLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEM 503

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             K  +P+ +TYN++I GLC  G  ++A+  LD ++ S  +P+E+TY TII+G  + G+ 
Sbjct: 504 KEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQV 563

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
               +    M E+ F  +    +TL+ GL KEG  E A+KL+   + KG   + V Y+ +
Sbjct: 564 EKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTI 623

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I  LC+  +  EA ++L EM       + +TY++++ G  ++G+   A E    +A+   
Sbjct: 624 ILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGK 683

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
             N+           E GK ++AR   T  + +   P+ +AYS+ I+ LC+ G  ++
Sbjct: 684 SENQ---------FLELGKRQDAR---TSEIPQEPHPNAIAYSNKINELCSQGRYKD 728


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/401 (33%), Positives = 224/401 (55%), Gaps = 2/401 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P  +TF  +I  +C+ G    A++LF +M  R C+PD+YTY T+++GLCK      
Sbjct: 155 LGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAA 214

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  L+ +M   GC P  VT++ LI+ LCK+  +  A  +   M  KG  P  V+Y +LI 
Sbjct: 215 AAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQ 274

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC      +A ++L+ M +   MP+ VT+  +I+   K G  ++   VL +M E     
Sbjct: 275 GLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEP 334

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y++L+ G   + +  +A KL+  M+ +GCKP+   YS LI+G C V + DEA+++ 
Sbjct: 335 NVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLF 394

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EMI+ G   N  +Y++L+  F + GK  +A E++KDM  N  + +   YSVL+ G C+ 
Sbjct: 395 NEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQ 454

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L +A  ++  M     KP++V Y+ +I  +C +G++  A KLF+E+       QPDV 
Sbjct: 455 GYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFV--HGLQPDVQ 512

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            Y  ++N LCK+  +  +++    M + GC P+  + N+ +
Sbjct: 513 IYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVII 553



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 213/436 (48%), Gaps = 18/436 (4%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA-KLVDNMFLKGCLPNEVTYN 301
           +D+A+   + M      P  + FN L++ + +  +   A   L   M L G  PN  T N
Sbjct: 71  IDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLN 130

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI+  CL  ++D   S+L +++     P  +T+ T+INGL K G       +   M  R
Sbjct: 131 ILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVAR 190

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               + Y Y+T+I+GL K G+   A  L K+M E GC+P+ V YS LID LC+    +EA
Sbjct: 191 GCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEA 250

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            +I   M   G +    +Y+SL++G     +  +A  +  +M   N + + V +S+LI  
Sbjct: 251 LDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDI 310

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C++G + EA+ V   M   G +P+V+ Y+S++HG      V EA KLF+ M+    K  
Sbjct: 311 FCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCK-- 368

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA------LKEKLEA 595
           PDVF+Y+IL+N  C    I  +  L N M+ +G  P+ V+    + A      L+E  E 
Sbjct: 369 PDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAREL 428

Query: 596 PQD--GTDFLNELA-----IRLFKRQRTSG-GFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            +D     +L +L      +  F +Q   G  F++   M   +L P    +  ++  +C+
Sbjct: 429 FKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCK 488

Query: 648 PKRIQAAINKCWSNLY 663
              +  A  K +S L+
Sbjct: 489 SGNLNHA-RKLFSELF 503



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 203/414 (49%), Gaps = 4/414 (0%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +     KA    +A+ LF  MV    C+  V ++ +++N + + G    A      
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVAR-GCQPDVYTYTTIINGLCKMGETAAAAGL--- 218

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I     +   P+ +T++ +I ++C+  LV+ A+ +F  M  +   P + +Y +L+ GLC 
Sbjct: 219 IKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCS 278

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            +R  EA  +L+EM      P  VTF++LI+  CK G +  A  ++  M   G  PN +T
Sbjct: 279 FSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVIT 338

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN+L+HG  L+  + +A  L D M+   C P+  +Y  +ING   + R  +  ++   M 
Sbjct: 339 YNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMI 398

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    N   Y+TLI    + GK  +A +L+K M   G  P+   YS L++G C+ G   
Sbjct: 399 HQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLG 458

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A  +   M       N   Y+ L+    +SG  + A +++ ++  +    +   Y+ +I
Sbjct: 459 KAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTII 518

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +GLC++G L EA   + +M   GC P+  +Y+ +I G         A++L  EM
Sbjct: 519 NGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEM 572



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 184/360 (51%), Gaps = 3/360 (0%)

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
           E  C+  V +++++++ + ++ L + AL+ ++++   K   I P  +++  +I+ +C   
Sbjct: 224 EVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYM---KAKGISPTVVSYTSLIQGLCSFS 280

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
               A  +  EM   N  PDI T+  L+D  CKE  + EA  +L  M   G  P  +T+N
Sbjct: 281 RWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYN 340

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
            L++G     E+  A KL D M  +GC P+  +Y+ LI+G C+   +D+A  L + M+  
Sbjct: 341 SLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQ 400

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
              PN V+Y T+I+   +LG+  +   +   M    +  +   YS L+ G  K+G    A
Sbjct: 401 GLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKA 460

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
            +L++ M     KPN V+Y+ LID +C+ G  + A ++  E+  +G   +   Y++++ G
Sbjct: 461 FRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIING 520

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             + G   +A+E ++ M ++ C  NE  Y+V+I G  +      A  +  +M  +G   D
Sbjct: 521 LCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/343 (30%), Positives = 173/343 (50%), Gaps = 4/343 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K  LV EA+ +F  M  +     TV S+ S++  +     +  A    N + +   +NI+
Sbjct: 243 KDRLVNEALDIFSYMKAK-GISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTS---LNIM 298

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +TF+L+I   C+ G V  A  + + M     EP++ TY +LM G   +  + EA  L
Sbjct: 299 PDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKL 358

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D M   GC P   ++++LING C    +  A +L + M  +G  PN V+Y TLIH  C 
Sbjct: 359 FDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQ 418

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L +A  L   M  +  +P+  TY  ++ G  K G      R+  +M+      N  +
Sbjct: 419 LGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVM 478

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI  + K G    A KL+ ++   G +P+  +Y+ +I+GLC+ G  DEA E   +M 
Sbjct: 479 YTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKME 538

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            +GC  N F+Y+ +++GF +     +AV++  +M     V +E
Sbjct: 539 EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADE 581



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 147/286 (51%), Gaps = 3/286 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + +F+ ++++  +EG     LE    +     M + PN +T+N ++        V  A +
Sbjct: 301 IVTFSLLIDIFCKEG---NVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARK 357

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           LF  M  R C+PD+++Y  L++G C   R+DEA  L +EM   G  P  V++  LI+  C
Sbjct: 358 LFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFC 417

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           + G+L  A +L  +M   G LP+  TY+ L+ G C +G L KA  L   M  +   PN V
Sbjct: 418 QLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLV 477

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            Y  +I+ + K G      ++   +       +  IY+T+I+GL KEG  ++A++ +++M
Sbjct: 478 MYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKM 537

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            E GC PN   Y+ +I G  +      A +++ EM + G  A+  T
Sbjct: 538 EEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 171/344 (49%), Gaps = 24/344 (6%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEYIY 370
           N+D A++  + M+  K +P  + +  +++ +V++ +  D    L   ME      N    
Sbjct: 70  NIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTL 129

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI+        +    +  ++++ G +P  + ++ LI+GLC+ G+  +A E+  +M+ 
Sbjct: 130 NILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVA 189

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC  + +TY++++ G  + G+   A  + K M +  C  + V YS LI  LC+D  + E
Sbjct: 190 RGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNE 249

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +++ M ++G  P VV+Y+S+I GLC+    +EA  + NEM  L     PD+ T+++L
Sbjct: 250 ALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSL--NIMPDIVTFSLL 307

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           ++  CK+ N+  +  +L +M + G +P+++T N  +     ++E  +             
Sbjct: 308 IDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVE------------- 354

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                     K+ +VM+ +   P   ++  ++   C  KRI  A
Sbjct: 355 --------ARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEA 390


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 180/644 (27%), Positives = 305/644 (47%), Gaps = 70/644 (10%)

Query: 37  RFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANS 96
           RF  V   +S  K+M T+   +        + + NS  KLG+  +    F  +++     
Sbjct: 163 RFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGP 222

Query: 97  GDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKS 156
             F    +VL                     Y +   VE A  +F  M      +R   S
Sbjct: 223 DLFTYTSLVL--------------------GYCRNDDVERACGVFCVMP-----RRNAVS 257

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           + ++++ + + G  H ALEF+  +   +     P   T+ +++  +C  G    A+ LF 
Sbjct: 258 YTNLIHGLCEAGKLHEALEFWARM---REDGCFPTVRTYTVLVCALCESGRELEALSLFG 314

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM  R CEP++YTY  L+D LCKE R+DEA+ +L+EM   G  P+ V FN LI   CK G
Sbjct: 315 EMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRG 374

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            +  A  ++  M  K   PN  TYN LI G C   ++D+A++LL++MV SK  P+ VTY 
Sbjct: 375 MMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYN 434

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+I+GL ++G     +R+   M    F  +++ ++  +  L + G+  +A ++ + + EK
Sbjct: 435 TLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEK 494

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
             K N   Y+ALIDG C+ GK + A  +   M+   C  N+ T++ ++ G  + GK   A
Sbjct: 495 HVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDA 554

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + + +DMAK +       Y++L+  + ++     A  +  +++S G +P+VV Y++ I  
Sbjct: 555 MLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKA 614

Query: 517 LCNAGSVEEA----LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
            C+ G +EEA    +K+ NE + L      D F YN+L+NA      +  +  +L  M  
Sbjct: 615 YCSQGRLEEAEEMVIKIKNEGVLL------DSFIYNLLINAYGCMGLLDSAFGVLRRMFG 668

Query: 573 RGCDPDLVTCNIFLTAL---KEKLEAPQ-------------DGTDFLNELAIRLFKRQRT 616
            GC+P  +T +I +  L   K K E                D TD  +++          
Sbjct: 669 TGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKI---------- 718

Query: 617 SGGFKIVEVMLQKFLS----PQTSTWERVVQELCRPKRIQAAIN 656
              F I  V+ +K       P  +T+ +++  LC+  R+  A +
Sbjct: 719 --DFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFS 760



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 236/472 (50%), Gaps = 39/472 (8%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K ++ S+N +L  + +  +    +  Y  ++     ++ PN +T N ++ + C+LG +  
Sbjct: 148 KLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAV 207

Query: 211 AIQLFREMPVRNCE--PDIYTYCT-------------------------------LMDGL 237
           A   F  + +  CE  PD++TY +                               L+ GL
Sbjct: 208 ARLFF--VRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGL 265

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           C+  +L EA+     M+ DGCFPT  T+ VL+  LC++G    A  L   M  +GC PN 
Sbjct: 266 CEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNV 325

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
            TY  LI  LC +G +D+A+ +L+ MV     P+ V +  +I    K G   D   VL  
Sbjct: 326 YTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGL 385

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAED-AMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
           ME +K   N   Y+ LI G F  GK+ D AM L  +M+E    P+ V Y+ LI GLC VG
Sbjct: 386 MESKKVCPNVRTYNELICG-FCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVG 444

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
             D A  +   MI +G + + +T+++ M      G+  +A +I + + + +   NE  Y+
Sbjct: 445 VVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYT 504

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            LI G C+ GK+  A  ++ +ML+  C P+ + ++ MI GL   G V++A+ L  +M   
Sbjct: 505 ALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKF 564

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           + K  P + TYNIL+  + K+ +   + ++LN ++  G  P++VT   F+ A
Sbjct: 565 DVK--PTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKA 614



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/498 (27%), Positives = 238/498 (47%), Gaps = 44/498 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA+++ + MV++     +V  FN+++    + G+   A+     + + K   + PN  
Sbjct: 341 MDEALKMLNEMVEK-GVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK---VCPNVR 396

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +I   CR   +D A+ L  +M      PD+ TY TL+ GLC+   +D A  L   M
Sbjct: 397 TYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLM 456

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             DG  P   TFN  +  LC+ G +G A ++++++  K    NE  Y  LI G C  G +
Sbjct: 457 IRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKI 516

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           + A SL  RM+A +C+PN +T+  +I+GL K G+  D   ++  M +       + Y+ L
Sbjct: 517 EHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNIL 576

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  + KE   + A ++  +++  G +PN V Y+A I   C  G+ +EAEE++ ++ N G 
Sbjct: 577 VEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGV 636

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             ++F Y+ L+  +   G    A  + + M    C  + + YS+L+  L  +   +E   
Sbjct: 637 LLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSN 696

Query: 494 -----------------VWTQ------------MLSRGCKPDVVAYSSMIHGLCNAGSVE 524
                            +W++            M   GC P++  YS +I+GLC  G + 
Sbjct: 697 PVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLN 756

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP------- 577
            A  L++ M   E    P    +N LL++ CK      ++ LL+SMM+  C         
Sbjct: 757 VAFSLYHHMR--EGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMME--CSHLAHLESY 812

Query: 578 DLVTCNIFLTALKEKLEA 595
            L+ C +F    KEK EA
Sbjct: 813 KLLICGLFEQMNKEKAEA 830



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 206/428 (48%), Gaps = 22/428 (5%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           G+AH + E+++       E H K    ++ ++++   + G    A   +  ++  +    
Sbjct: 482 GEAHQILESLK-------EKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEE---C 531

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LPN++TFN++I  + + G V +A+ L  +M   + +P ++TY  L++ + KE   D A  
Sbjct: 532 LPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANE 591

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L+ +   G  P  VT+   I   C  G L  A ++V  +  +G L +   YN LI+   
Sbjct: 592 ILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYG 651

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEERKFHV-N 366
             G LD A  +L RM  + C P+ +TY  ++  LV      +G+  V + +      V N
Sbjct: 652 CMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDN 711

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             I+S +  G+           L+++M E GC PN   YS LI+GLC+VG+ + A  +  
Sbjct: 712 TDIWSKIDFGI--------TTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYH 763

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            M   G + +   ++SL+    + G   +AV +   M + + + +   Y +LI GL E  
Sbjct: 764 HMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQM 823

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
              +A  V+  +L  G   D VA+  +I GL   G V++  +L N M     +  P+  T
Sbjct: 824 NKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPE--T 881

Query: 547 YNILLNAL 554
           Y++L+  L
Sbjct: 882 YSMLMQEL 889



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 178/392 (45%), Gaps = 33/392 (8%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           +  + +LI  Y  +G  +    +  RM  E+ +    +F  +     K   V++A+ L  
Sbjct: 500 EHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVE 559

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M  +F  K T+ ++N ++  +++E  + RA E  N ++++ +    PN +T+   IK  
Sbjct: 560 DMA-KFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQ---PNVVTYTAFIKAY 615

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C  G ++ A ++  ++       D + Y  L++       LD A  +L  M   GC P+ 
Sbjct: 616 CSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSY 675

Query: 263 VTFNVLINGLC-----KNG------------------------ELGRAAKLVDNMFLKGC 293
           +T+++L+  L      K G                        + G    L + M   GC
Sbjct: 676 LTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGC 735

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           +PN  TY+ LI+GLC  G L+ A SL   M      P+E+ + ++++   KLG   +   
Sbjct: 736 VPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVT 795

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +L SM E     +   Y  LI GLF++   E A  ++  ++  G   + V +  LIDGL 
Sbjct: 796 LLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLA 855

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           + G  D+  E+L  M  NGC  +  TYS LM+
Sbjct: 856 KTGYVDQCSELLNLMEKNGCRLHPETYSMLMQ 887


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 244/480 (50%), Gaps = 35/480 (7%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P+ +TF  ++  +C    V  A+ LF ++    C PD+ T+ TLM+GLC+E R+ E
Sbjct: 145 LGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVE 200

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF-LKGCLPNEVTYNTLI 304
           AV LLD M  +G  P  +T+   ++G+CK G+   A  L+  M  +    PN V Y+ +I
Sbjct: 201 AVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAII 260

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLC  G    + +L   M      PN VTY  +I G    GR     R+L  M ERK  
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            N   Y+ LI+   KEGK  +A +L+ +M+ +G  PNT+ Y+++IDG C+  + D AE++
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
            + M   GC+ + FT+++L+ G+  + +    +E+  +M +   V N V Y+ LIHG C 
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKS 540
            G L  A  +  QM+S G  PD+V  ++++ GLC+ G +++AL++F  M    + L+   
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500

Query: 541 -----QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
                +PDV TYNIL+  L  +     + +L   M  RG  PD +T +  +         
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI--------- 551

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             DG          L K+ R     ++   M  K  SP   T+  ++   C+  R+   +
Sbjct: 552 --DG----------LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599



 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 153/510 (30%), Positives = 266/510 (52%), Gaps = 39/510 (7%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ ++ ++    LP+ + FN ++  V R+   D  I L+++M  +    DIY++  
Sbjct: 65  AIDLFSDMLRSRP---LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  ++L  A+    ++   G  P  VTF  L++GLC +  +  A  L    F + 
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL----FHQI 177

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C P+ +T+ TL++GLC +G + +AV+LLDRMV +   P+++TYGT ++G+ K+G  V   
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 353 RVLMSMEE-RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +L  MEE      N  IYS +I GL K+G+  D+  L+ +M +KG  PN V Y+ +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C  G+   A+ +L EM+    + N  TY++L+  F + GK  +A E++ +M     + N
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + Y+ +I G C+  +L  A  ++  M ++GC PDV  ++++I G C A  +++ ++L +
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 532 EMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA- 588
           EM    P+     +  TYN L++  C   +++ ++DL   M+  G  PD+VTCN  L   
Sbjct: 418 EM----PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473

Query: 589 -----LKEKLEA---------------PQDGT--DFL--NELAIRLFKRQRTSGGFKIVE 624
                LK+ LE                P +G   D L  N L   L    +     ++ E
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 533

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            M  + + P T T+  ++  LC+  R+  A
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 240/462 (51%), Gaps = 24/462 (5%)

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           H V EA+ LFH +     C+  V +F +++N + +EG    A+   + +V      + P+
Sbjct: 165 HRVSEALDLFHQI-----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVEN---GLQPD 216

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
            +T+   +  +C++G   +A+ L R+M  + + +P++  Y  ++DGLCK+ R  ++  L 
Sbjct: 217 QITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLF 276

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EMQ  G FP  VT+N +I G C +G    A +L+  M  +   PN VTYN LI+    +
Sbjct: 277 IEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKE 336

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G   +A  L D M+    +PN +TY ++I+G  K  R      +   M  +    + + +
Sbjct: 337 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI G     + +D M+L  +M  +G   NTV Y+ LI G C VG  + A ++  +MI+
Sbjct: 397 TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 456

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK-----------NNCVYNEVCYSVLI 479
           +G   +  T ++L+ G  ++GK   A+E++K M K           N    + + Y++LI
Sbjct: 457 SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILI 516

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GL  +GK  EA  ++ +M  RG  PD + YSSMI GLC    ++EA ++F  M     K
Sbjct: 517 CGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSM---GSK 573

Query: 540 S-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           S  P+V T+N L+N  CK   +   ++L   M  RG   D +
Sbjct: 574 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 169/600 (28%), Positives = 274/600 (45%), Gaps = 55/600 (9%)

Query: 98  DFKSLEMVLYRMRREKRVV-----LEK--------SFIFIFKAYGKAHLVEEAIRLFHTM 144
           DF  L   + RM R   V+     +E+        SF  + K +     +  A+  F  +
Sbjct: 83  DFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 142

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V +F ++L+ +  +     AL+ ++ I         P+ LTF  ++  +CR
Sbjct: 143 T-KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-------PDVLTFTTLMNGLCR 194

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPV 263
            G V  A+ L   M     +PD  TY T +DG+CK      A+ LL +M ++    P  V
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            ++ +I+GLCK+G    +  L   M  KG  PN VTYN +I G C+ G    A  LL  M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +  K  PN VTY  +IN  VK G+  + A +   M  R    N   Y+++I G  K+ + 
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A  ++  M  KGC P+   ++ LIDG C   + D+  E+L EM   G  AN  TY++L
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS--- 500
           + GF   G  + A+++ + M  +    + V  + L+ GLC++GKL++A  ++  M     
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 501 --------RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNIL 550
                    G +PDV+ Y+ +I GL N G   EA +L+ EM    P     PD  TY+ +
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM----PHRGIVPDTITYSSM 550

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR- 609
           ++ LCKQS +  +  +  SM  +   P++VT N  +     K     DG +   E+  R 
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC-KAGRVDDGLELFCEMGRRG 609

Query: 610 --------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                           K    +G   I + M+   + P T T   ++      + ++ A+
Sbjct: 610 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAV 669



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 220/443 (49%), Gaps = 49/443 (11%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+ L   M +  H K  V  ++++++ + ++G   R  + +N  +  +   I PN +T+N
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG---RHSDSHNLFIEMQDKGIFPNIVTYN 292

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I   C  G    A +L +EM  R   P++ TY  L++   KE +  EA  L DEM   
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP--------------------- 295
           G  P  +T+N +I+G CK   L  A  +   M  KGC P                     
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412

Query: 296 --------------NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
                         N VTYNTLIHG CL G+L+ A+ L  +M++S   P+ VT  T+++G
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNE-----------YIYSTLISGLFKEGKAEDAMKLW 390
           L   G+  D   +  +M++ K  ++              Y+ LI GL  EGK  +A +L+
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 532

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           ++M  +G  P+T+ YS++IDGLC+  + DEA ++   M +   + N  T+++L+ G+ ++
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 592

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G+    +E++ +M +   V + + Y  LI+G  + G +  A  ++ +M+S G  PD +  
Sbjct: 593 GRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITI 652

Query: 511 SSMIHGLCNAGSVEEALKLFNEM 533
            +M+ G  +   +E A+ +  ++
Sbjct: 653 RNMLTGFWSKEELERAVAMLEDL 675



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/375 (29%), Positives = 183/375 (48%), Gaps = 50/375 (13%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A RL   M+ E      V ++N+++N  ++EG +  A E Y+ ++      I+PNT+T+N
Sbjct: 307 AQRLLQEML-ERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR---GIIPNTITYN 362

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I   C+   +D A  +F  M  + C PD++T+ TL+DG C   R+D+ + LL EM   
Sbjct: 363 SMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRR 422

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G     VT+N LI+G C  G+L  A  L   M   G  P+ VT NTL+ GLC  G L  A
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482

Query: 317 VSLLDRMVASK----------------------------------------------CMP 330
           + +   M  SK                                               +P
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + +TY ++I+GL K  R  +  ++ +SM  + F  N   ++TLI+G  K G+ +D ++L+
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            +M  +G   + ++Y  LI G  +VG  + A +I  EMI++G   +  T  +++ GF+  
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662

Query: 451 GKGHKAVEIWKDMAK 465
            +  +AV + +D+ +
Sbjct: 663 EELERAVAMLEDLQR 677



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 148/332 (44%), Gaps = 56/332 (16%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L SG ++    EDA+ L+  M+     P+ + ++ L+  + R+ +PD    +  +M    
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              + ++++ L+K F    K   A+  +  + K     + V ++ L+HGLC D ++ EA 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKS---------- 540
            ++ Q+    C+PDV+ ++++++GLC  G V EA+ L + M+   L+P            
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 541 ----------------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
                                 +P+V  Y+ +++ LCK    S S +L   M D+G  P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 579 LVTCNIFLTA-------------LKEKLE---APQDGTDFLNELAIRLFKRQRTSGGFKI 622
           +VT N  +               L+E LE   +P   T   N L     K  +     ++
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVT--YNALINAFVKEGKFFEAAEL 345

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            + ML + + P T T+  ++   C+  R+ AA
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  256 bits (653), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 141/431 (32%), Positives = 238/431 (55%), Gaps = 3/431 (0%)

Query: 160 VLNVIIQEGLYHRALEF-YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
            LN++I      R L F ++ +     +   PNT+TFN ++  +C  G V  A++L   M
Sbjct: 127 TLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCM 186

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
            +    PD+ T  T+++GLC ++R+ EAV L+  M  +GC P   T+  ++N +CK+G  
Sbjct: 187 VLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNT 246

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A  L+  M  +   P+ VTY  +I  LC  G LD A+S    M       N  TY ++
Sbjct: 247 ASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSL 306

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I      GR  DGA++L  M  RK   N   +S LI  L KEGK  +A  L+ +M+ +G 
Sbjct: 307 IGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGI 366

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
           +PNT+ Y++LI GLC   + DEA +++  M++ GC  + +TY+ L+ GF ++ +    + 
Sbjct: 367 EPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMR 426

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +++ M+    + + V YS LI G C+  KL  A+ V+ +M+S+G  P ++ Y+ ++ GLC
Sbjct: 427 LFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLC 486

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           + G +EEAL + ++M   + K + D+  YNI+++ +C  + +  +  L  S+  +G   D
Sbjct: 487 DNGELEEALGILDQM--HKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRD 544

Query: 579 LVTCNIFLTAL 589
           + + NI L+ L
Sbjct: 545 IQSYNIMLSGL 555



 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 129/401 (32%), Positives = 215/401 (53%), Gaps = 2/401 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP  + FN +   + R    D  + L ++M ++    D+YT   +++  C+  +L  A  
Sbjct: 87  LPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFS 146

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
            + ++   G  P  VTFN L+NGLC  G +  A +LVD M L   +P+ +T NT+++GLC
Sbjct: 147 AMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLC 206

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           LK  + +AV L+ RM+A+ C PN+ TYG I+N + K G       +L  ME RK   +  
Sbjct: 207 LKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVV 266

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ +I  L K+G+ +DA+  + +M  KG K N   Y++LI   C  G+ D+  ++L +M
Sbjct: 267 TYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDM 326

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I      N  T+S+L+    + GK  +A +++ +M       N + Y+ LI+GLC D +L
Sbjct: 327 ITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRL 386

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EA  +   M+S+GC PD+  Y+ +I+G C A  V++ ++LF +M         D  TY+
Sbjct: 387 DEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSL--RGMIADTVTYS 444

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            L+   C+   +  +  +   M+ +G  P ++T  I L  L
Sbjct: 445 TLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/435 (31%), Positives = 232/435 (53%), Gaps = 9/435 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN++LN +  EG    A+E  + +V ++H   +P+ +T N ++  +C    V  A+ L 
Sbjct: 162 TFNTLLNGLCLEGRVFEAVELVDCMVLSQH---VPDLITLNTIVNGLCLKDRVSEAVDLI 218

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             M    C+P+ +TY  +++ +CK      A+ LL +M+     P  VT+ ++I+ LCK+
Sbjct: 219 ARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKD 278

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G L  A      M  KG   N  TYN+LI   C  G  D    LL  M+  K  PN VT+
Sbjct: 279 GRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTF 338

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +I+ LVK G+  +   +   M  R    N   Y++LI GL  + + ++A ++   M+ 
Sbjct: 339 SALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVS 398

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KGC P+   Y+ LI+G C+  + D+   +  +M   G  A+  TYS+L++GF +S K   
Sbjct: 399 KGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIV 458

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A +++++M         + Y++L+ GLC++G+L EA  +  QM     + D+  Y+ +IH
Sbjct: 459 AKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIH 518

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           G+CNA  V++A  LF    C  P    + D+ +YNI+L+ LCK+S++S +  L   M + 
Sbjct: 519 GMCNANKVDDAWSLF----CSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKED 574

Query: 574 GCDPDLVTCNIFLTA 588
           G +PD  T N  + A
Sbjct: 575 GYEPDGCTYNTLIRA 589



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 208/382 (54%), Gaps = 6/382 (1%)

Query: 204 RLGLVD----NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           R GLVD    +A+ LF+ M      P +  +  L   L +  + D  + L  +M++ G  
Sbjct: 63  RSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIA 122

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
               T N++IN  C+  +LG A   +  +F  G  PN VT+NTL++GLCL+G + +AV L
Sbjct: 123 YDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVEL 182

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           +D MV S+ +P+ +T  TI+NGL    R  +   ++  M       N++ Y  +++ + K
Sbjct: 183 VDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCK 242

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G    A+ L ++M  +  KP+ V Y+ +ID LC+ G+ D+A     EM   G  AN FT
Sbjct: 243 SGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFT 302

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+SL+  F   G+     ++ +DM       N V +S LI  L ++GKL EA+ ++ +M+
Sbjct: 303 YNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMI 362

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           +RG +P+ + Y+S+I+GLCN   ++EA ++ + M  +     PD++TYNIL+N  CK   
Sbjct: 363 TRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLM--VSKGCDPDIWTYNILINGFCKAKQ 420

Query: 560 ISHSIDLLNSMMDRGCDPDLVT 581
           +   + L   M  RG   D VT
Sbjct: 421 VDDGMRLFRKMSLRGMIADTVT 442



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/474 (29%), Positives = 240/474 (50%), Gaps = 10/474 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ L   MV   H    + + N+++N +    L  R  E  + I         PN  
Sbjct: 176 VFEAVELVDCMVLSQHVPDLI-TLNTIVNGLC---LKDRVSEAVDLIARMMANGCQPNQF 231

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  ++  +C+ G   +A+ L R+M  R  +P + TY  ++D LCK+ RLD+A+    EM
Sbjct: 232 TYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM 291

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G      T+N LI   C  G     A+L+ +M  +   PN VT++ LI  L  +G L
Sbjct: 292 ETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKL 351

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L + M+     PN +TY ++I GL    R  +  +++  M  +    + + Y+ L
Sbjct: 352 TEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNIL 411

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G  K  + +D M+L+++M  +G   +TV YS LI G C+  K   A+++  EM++ G 
Sbjct: 412 INGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGV 471

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                TY+ L+ G  ++G+  +A+ I   M K     +   Y+++IHG+C   K+ +A  
Sbjct: 472 HPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWS 531

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  + S+G K D+ +Y+ M+ GLC   S+ EA  LF +M   E   +PD  TYN L+ A
Sbjct: 532 LFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKM--KEDGYEPDGCTYNTLIRA 589

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
             + ++I+ S+ L+  M   G   D  T  I +    + L + +    FLN L+
Sbjct: 590 HLRGNDITTSVQLIEEMKRCGFSSDASTVKIVM----DMLSSGELDKSFLNMLS 639



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 160/343 (46%), Gaps = 27/343 (7%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL-MSMEERKFHVNEYIYST 372
           D AV+L   M+ S+ +P  + +  +  GL+   +  D    L   ME +    + Y  + 
Sbjct: 72  DDAVALFQSMLRSRPLPTVIDFNRLF-GLLARTKQYDLVLALCKQMELKGIAYDLYTLNI 130

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +I+   +  K   A     ++ + G +PNTV ++ L++GLC  G+  EA E++  M+ + 
Sbjct: 131 MINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQ 190

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              +  T ++++ G     +  +AV++   M  N C  N+  Y  +++ +C+ G    A 
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASAL 250

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILL 551
            +  +M  R  KP VV Y+ +I  LC  G +++AL  F+EM   E K  + +VFTYN L+
Sbjct: 251 DLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEM---ETKGIKANVFTYNSLI 307

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
            + C          LL  M+ R   P++VT +  + +L ++ +  +   D  NE      
Sbjct: 308 GSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTE-AKDLYNE------ 360

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                         M+ + + P T T+  ++  LC  KR+  A
Sbjct: 361 --------------MITRGIEPNTITYNSLIYGLCNDKRLDEA 389


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 151/480 (31%), Positives = 244/480 (50%), Gaps = 35/480 (7%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P+ +TF  ++  +C    V  A+ LF ++    C PD+ T+ TLM+GLC+E R+ E
Sbjct: 145 LGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVE 200

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF-LKGCLPNEVTYNTLI 304
           AV LLD M  +G  P  +T+   ++G+CK G+   A  L+  M  +    PN V Y+ +I
Sbjct: 201 AVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAII 260

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLC  G    + +L   M      PN VTY  +I G    GR     R+L  M ERK  
Sbjct: 261 DGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKIS 320

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            N   Y+ LI+   KEGK  +A +L+ +M+ +G  PNT+ Y+++IDG C+  + D AE++
Sbjct: 321 PNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDM 380

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
            + M   GC+ + FT+++L+ G+  + +    +E+  +M +   V N V Y+ LIHG C 
Sbjct: 381 FYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCL 440

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKS 540
            G L  A  +  QM+S G  PD+V  ++++ GLC+ G +++AL++F  M    + L+   
Sbjct: 441 VGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASH 500

Query: 541 -----QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
                +PDV TYNIL+  L  +     + +L   M  RG  PD +T +  +         
Sbjct: 501 PFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMI--------- 551

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             DG          L K+ R     ++   M  K  SP   T+  ++   C+  R+   +
Sbjct: 552 --DG----------LCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGL 599



 Score =  254 bits (650), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 153/510 (30%), Positives = 266/510 (52%), Gaps = 39/510 (7%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ ++ ++    LP+ + FN ++  V R+   D  I L+++M  +    DIY++  
Sbjct: 65  AIDLFSDMLRSRP---LPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  ++L  A+    ++   G  P  VTF  L++GLC +  +  A  L    F + 
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL----FHQI 177

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C P+ +T+ TL++GLC +G + +AV+LLDRMV +   P+++TYGT ++G+ K+G  V   
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 353 RVLMSMEE-RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +L  MEE      N  IYS +I GL K+G+  D+  L+ +M +KG  PN V Y+ +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C  G+   A+ +L EM+    + N  TY++L+  F + GK  +A E++ +M     + N
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + Y+ +I G C+  +L  A  ++  M ++GC PDV  ++++I G C A  +++ ++L +
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 532 EMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA- 588
           EM    P+     +  TYN L++  C   +++ ++DL   M+  G  PD+VTCN  L   
Sbjct: 418 EM----PRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGL 473

Query: 589 -----LKEKLEA---------------PQDGT--DFL--NELAIRLFKRQRTSGGFKIVE 624
                LK+ LE                P +G   D L  N L   L    +     ++ E
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYE 533

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            M  + + P T T+  ++  LC+  R+  A
Sbjct: 534 EMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563



 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 145/462 (31%), Positives = 240/462 (51%), Gaps = 24/462 (5%)

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           H V EA+ LFH +     C+  V +F +++N + +EG    A+   + +V      + P+
Sbjct: 165 HRVSEALDLFHQI-----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVEN---GLQPD 216

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
            +T+   +  +C++G   +A+ L R+M  + + +P++  Y  ++DGLCK+ R  ++  L 
Sbjct: 217 QITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLF 276

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EMQ  G FP  VT+N +I G C +G    A +L+  M  +   PN VTYN LI+    +
Sbjct: 277 IEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKE 336

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G   +A  L D M+    +PN +TY ++I+G  K  R      +   M  +    + + +
Sbjct: 337 GKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTF 396

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI G     + +D M+L  +M  +G   NTV Y+ LI G C VG  + A ++  +MI+
Sbjct: 397 TTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMIS 456

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK-----------NNCVYNEVCYSVLI 479
           +G   +  T ++L+ G  ++GK   A+E++K M K           N    + + Y++LI
Sbjct: 457 SGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILI 516

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GL  +GK  EA  ++ +M  RG  PD + YSSMI GLC    ++EA ++F  M     K
Sbjct: 517 CGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSM---GSK 573

Query: 540 S-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           S  P+V T+N L+N  CK   +   ++L   M  RG   D +
Sbjct: 574 SFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 169/600 (28%), Positives = 274/600 (45%), Gaps = 55/600 (9%)

Query: 98  DFKSLEMVLYRMRREKRVV-----LEK--------SFIFIFKAYGKAHLVEEAIRLFHTM 144
           DF  L   + RM R   V+     +E+        SF  + K +     +  A+  F  +
Sbjct: 83  DFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKL 142

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V +F ++L+ +  +     AL+ ++ I         P+ LTF  ++  +CR
Sbjct: 143 T-KLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-------PDVLTFTTLMNGLCR 194

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPV 263
            G V  A+ L   M     +PD  TY T +DG+CK      A+ LL +M ++    P  V
Sbjct: 195 EGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            ++ +I+GLCK+G    +  L   M  KG  PN VTYN +I G C+ G    A  LL  M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +  K  PN VTY  +IN  VK G+  + A +   M  R    N   Y+++I G  K+ + 
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A  ++  M  KGC P+   ++ LIDG C   + D+  E+L EM   G  AN  TY++L
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS--- 500
           + GF   G  + A+++ + M  +    + V  + L+ GLC++GKL++A  ++  M     
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 494

Query: 501 --------RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNIL 550
                    G +PDV+ Y+ +I GL N G   EA +L+ EM    P     PD  TY+ +
Sbjct: 495 DLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM----PHRGIVPDTITYSSM 550

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR- 609
           ++ LCKQS +  +  +  SM  +   P++VT N  +     K     DG +   E+  R 
Sbjct: 551 IDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC-KAGRVDDGLELFCEMGRRG 609

Query: 610 --------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                           K    +G   I + M+   + P T T   ++      + ++ A+
Sbjct: 610 IVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAV 669



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 220/443 (49%), Gaps = 49/443 (11%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+ L   M +  H K  V  ++++++ + ++G   R  + +N  +  +   I PN +T+N
Sbjct: 236 ALNLLRKMEEISHIKPNVVIYSAIIDGLCKDG---RHSDSHNLFIEMQDKGIFPNIVTYN 292

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I   C  G    A +L +EM  R   P++ TY  L++   KE +  EA  L DEM   
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP--------------------- 295
           G  P  +T+N +I+G CK   L  A  +   M  KGC P                     
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412

Query: 296 --------------NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
                         N VTYNTLIHG CL G+L+ A+ L  +M++S   P+ VT  T+++G
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNE-----------YIYSTLISGLFKEGKAEDAMKLW 390
           L   G+  D   +  +M++ K  ++              Y+ LI GL  EGK  +A +L+
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELY 532

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           ++M  +G  P+T+ YS++IDGLC+  + DEA ++   M +   + N  T+++L+ G+ ++
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKA 592

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G+    +E++ +M +   V + + Y  LI+G  + G +  A  ++ +M+S G  PD +  
Sbjct: 593 GRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITI 652

Query: 511 SSMIHGLCNAGSVEEALKLFNEM 533
            +M+ G  +   +E A+ +  ++
Sbjct: 653 RNMLTGFWSKEELERAVAMLEDL 675



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 148/332 (44%), Gaps = 56/332 (16%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L SG ++    EDA+ L+  M+     P+ + ++ L+  + R+ +PD    +  +M    
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              + ++++ L+K F    K   A+  +  + K     + V ++ L+HGLC D ++ EA 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKS---------- 540
            ++ Q+    C+PDV+ ++++++GLC  G V EA+ L + M+   L+P            
Sbjct: 172 DLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGM 227

Query: 541 ----------------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
                                 +P+V  Y+ +++ LCK    S S +L   M D+G  P+
Sbjct: 228 CKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPN 287

Query: 579 LVTCNIFLTA-------------LKEKLE---APQDGTDFLNELAIRLFKRQRTSGGFKI 622
           +VT N  +               L+E LE   +P   T   N L     K  +     ++
Sbjct: 288 IVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVT--YNALINAFVKEGKFFEAAEL 345

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            + ML + + P T T+  ++   C+  R+ AA
Sbjct: 346 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAA 377



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 106/208 (50%), Gaps = 9/208 (4%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           K  + +FKA  K+ +  +A   F+ +      +  V ++N ++  +I EG +  A E Y 
Sbjct: 480 KDALEMFKAMQKSKMDLDASHPFNGV------EPDVLTYNILICGLINEGKFLEAEELYE 533

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +    H  I+P+T+T++ +I  +C+   +D A Q+F  M  ++  P++ T+ TL++G C
Sbjct: 534 EM---PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K  R+D+ + L  EM   G     + +  LI G  K G +  A  +   M   G  P+ +
Sbjct: 591 KAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTI 650

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           T   ++ G   K  L++AV++L+ +  S
Sbjct: 651 TIRNMLTGFWSKEELERAVAMLEDLQMS 678


>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
 gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
          Length = 478

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 145/416 (34%), Positives = 233/416 (56%), Gaps = 12/416 (2%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +TF  +I    ++ +F+  E +L RM+ EK  + E+ F+ I + YG+ H+  +AIR+FH 
Sbjct: 51  TTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVFHK 110

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D F CK T KS+ SV  ++++E     A+ FY ++   + M +  + ++ N++IK +C
Sbjct: 111 MND-FGCKPTDKSYISVFAILVEENQLKVAMSFYKYM---REMGVRQSVVSLNVLIKALC 166

Query: 204 R-LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           +  G +D A ++FREMP R C+PD YTY TL++GLCK  +  EA  L  EM   GC P+ 
Sbjct: 167 KNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSV 226

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT++ L++GLC+ G +  A  L D M  K   PN  TY++L+ GLC  G   +A+ LL+ 
Sbjct: 227 VTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEM 286

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MV  +  PN VTY T+INGL K G+  +    L  M+ +    +  +Y  +I+G     K
Sbjct: 287 MVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRK 346

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYS-------ALIDGLCRVGKPDEAEEILFEMINNGCAA 435
            ++A     +M+     PN V +S        ++ GLC  G  + + ++   M   G + 
Sbjct: 347 FQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISI 406

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           +A T+ SL+K F + G  HKA  I+ +M  + CV +   +S ++ G  +  K+REA
Sbjct: 407 DAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGGFWDRRKVREA 462



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 175/339 (51%), Gaps = 8/339 (2%)

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R+ +  +AI++F +M    C+P   +Y ++   L +EN+L  A+     M+  G   + V
Sbjct: 97  RVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVV 156

Query: 264 TFNVLINGLCKN-GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           + NVLI  LCKN G +  A ++   M  +GC P+  TY TLI+GLC  G   +A  L   
Sbjct: 157 SLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKE 216

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C P+ VTY  +++GL + G   +   +   M+++    N + YS+L+ GL K G 
Sbjct: 217 MDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGG 276

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           + +AM+L + M+ K  KPN V YS LI+GLC+ GK  EA E L  M   G   +A  Y  
Sbjct: 277 SLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGK 336

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV-------LIHGLCEDGKLREARMVW 495
           ++ GF    K  +A     +M       N V +S+       ++ GLC +G L  +  ++
Sbjct: 337 IINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLY 396

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
             M +RG   D   + S++   C  G + +A ++F+EM+
Sbjct: 397 IGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMV 435



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 173/364 (47%), Gaps = 10/364 (2%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D  T+  ++  L   N    A  +L+ M+ + C  T   F  +  G  +      A ++ 
Sbjct: 49  DHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDAIRVF 108

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M   GC P + +Y ++   L  +  L  A+S    M       + V+   +I  L K 
Sbjct: 109 HKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKN 168

Query: 346 GRAVDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
              +D A  +   M +R    + Y Y TLI+GL K GK  +A +L+K+M  KGC P+ V 
Sbjct: 169 SGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVT 228

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           YS L+ GLC+ G  DEA  +  +M       N FTYSSLM G  ++G   +A+E+ + M 
Sbjct: 229 YSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMV 288

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +     N V YS LI+GLC++GKL EA     +M  +G KPD   Y  +I+G CN    +
Sbjct: 289 RKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQ 348

Query: 525 EALKLFNEMLCLEPKSQPDVFTY-------NILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           EA    +EM+    +  P+  T+       N+++  LC   N++ S  L   M  RG   
Sbjct: 349 EAATYLDEMVL--GQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISI 406

Query: 578 DLVT 581
           D  T
Sbjct: 407 DAGT 410



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/276 (23%), Positives = 119/276 (43%), Gaps = 21/276 (7%)

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G + +   +  +I  L    +   AEE+L  M    C      + S+ +G+        A
Sbjct: 45  GFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLDA 104

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + ++  M    C   +  Y  +   L E+ +L+ A   +  M   G +  VV+ + +I  
Sbjct: 105 IRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKA 164

Query: 517 LC-NAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           LC N+G+++ A ++F EM    PK    PD +TY  L+N LCK      + +L   M  +
Sbjct: 165 LCKNSGTIDAAFEIFREM----PKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTK 220

Query: 574 GCDPDLVTCNIFLTAL--------------KEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           GC P +VT +  +  L              K K +A +      + L   L K   +   
Sbjct: 221 GCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEA 280

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +++E+M++K   P   T+  ++  LC+  ++  A+
Sbjct: 281 MELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAV 316


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 156/539 (28%), Positives = 276/539 (51%), Gaps = 21/539 (3%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  + K+Y +  L+++A+ + H +         V S+N+VL+  I+     R + F  ++
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVH-LSQAHGFMPGVLSYNAVLDATIRS---KRNISFAENV 192

Query: 181 VNAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
                   + PN  T+N++I+  C  G +D A++ F  M  + C P++ TY TL+DG CK
Sbjct: 193 FKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCK 252

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             ++D+   LL  M + G  P  +++NV+INGLC+ G +   + ++  M  +G   +EVT
Sbjct: 253 LRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVT 312

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTLI G C +GN  +A+ +   M+     P+ +TY ++I+ + K G        L  M 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMR 372

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            R    NE  Y+TL+ G  ++G   +A ++ K+M++ G  P+ V Y+ALI+G C  GK  
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMV 432

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A  +L +M   G   +  +YS+++ GF  S    +A+ + + M       + + YS LI
Sbjct: 433 DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLI 492

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G CE  + +EA  ++ +ML  G  PD   Y+++I+  C  G +++A++L NEM  +E  
Sbjct: 493 QGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEM--VEKG 550

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             PDV TY++L+N L KQ+    +  LL  +      P  VT +  +          ++ 
Sbjct: 551 VLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI----------ENC 600

Query: 600 TDFLNELAIRLFK----RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           ++   +  + L K    +   +   ++ E ML+K   P  + +  ++   CR   I+ A
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKA 659



 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 220/452 (48%), Gaps = 55/452 (12%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL F++ +   +    LPN +T+N +I   C+L  +D+  +L R M ++  EP++ +Y  
Sbjct: 224 ALRFFDRM---EKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNV 280

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++GLC+E R+ E   +L EM   G     VT+N LI G CK G   +A  +   M   G
Sbjct: 281 VINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHG 340

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ +TY +LIH +C  GN+++A   LD+M      PNE TY T+++G  + G   +  
Sbjct: 341 LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAY 400

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           RVL  M +  F  +   Y+ LI+G    GK  DA+ + + M EKG  P+ V YS ++ G 
Sbjct: 401 RVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGF 460

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           CR    DEA  +  +M+  G   +  TYSSL++GF E  +  +A +++ +M +     +E
Sbjct: 461 CRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDE 520

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS--------------------- 511
             Y+ LI+  C +G L++A  +  +M+ +G  PDVV YS                     
Sbjct: 521 FTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLK 580

Query: 512 -----------------------------SMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
                                        S+I G C  G + EA ++F  ML  E   +P
Sbjct: 581 LFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML--EKNHKP 638

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           D   YN++++  C+  +I  +  L   M+  G
Sbjct: 639 DGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSG 670



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 132/440 (30%), Positives = 216/440 (49%), Gaps = 59/440 (13%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +++N+VI  +CR G +     +  EM  R    D  TY TL+ G CKE    +A+++
Sbjct: 273 PNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM   G  P+ +T+  LI+ +CK G + RA + +D M ++G  PNE TY TL+ G   
Sbjct: 333 HAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQ 392

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           KG +++A  +L  M+ +   P+ VTY  +ING    G+ VD   VL  M+E+    +   
Sbjct: 393 KGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVS 452

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YST++SG  +    ++A+++ ++M+ KG KP+T+ YS+LI G C   +  EA ++  EM+
Sbjct: 453 YSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEML 512

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL------- 482
             G   + FTY++L+  +   G   KA+++  +M +   + + V YSVLI+GL       
Sbjct: 513 RVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTR 572

Query: 483 -------------------------------------------CEDGKLREARMVWTQML 499
                                                      C  G + EA  V+  ML
Sbjct: 573 EAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESML 632

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            +  KPD  AY+ MIHG C  G + +A  L+ EM+      +     + + + AL K  +
Sbjct: 633 EKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMV------KSGFLLHTVTVIALVKTLH 686

Query: 560 ISHSIDLLNSMMD---RGCD 576
               ++ LNS++    R C+
Sbjct: 687 KEGKVNELNSVIANVLRSCE 706



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 199/399 (49%), Gaps = 54/399 (13%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++    +EG +H+AL  +  ++  +H  + P+ +T+  +I ++C+ G ++ A +  
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEML--RH-GLSPSVITYTSLIHSMCKAGNMNRATEFL 368

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M VR   P+  TY TL+DG  ++  ++EA  +L EM  +G  P+ VT+N LING C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G++  A  ++++M  KG  P+ V+Y+T++ G C   ++D+A+ +  +MVA    P+ +TY
Sbjct: 429 GKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITY 488

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++I G  +  R  +   +   M       +E+ Y+ LI+    EG  + A++L  +M+E
Sbjct: 489 SSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVE 548

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS-------------- 441
           KG  P+ V YS LI+GL +  +  EA+ +L ++       +  TY               
Sbjct: 549 KGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608

Query: 442 -SLMKGF------------FES-----------------------GKGHKAVEIWKDMAK 465
            SL+KGF            FES                       G   KA  ++K+M K
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVK 668

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +  + + V    L+  L ++GK+ E   V   +L R C+
Sbjct: 669 SGFLLHTVTVIALVKTLHKEGKVNELNSVIANVL-RSCE 706



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 170/354 (48%), Gaps = 35/354 (9%)

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEERKFHV 365
           LCL   +DKA+S++    A   MP  ++Y  +++  ++  R +  A  V   M + +   
Sbjct: 147 LCL---IDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSP 203

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N + Y+ LI G    G  + A++ + +M +KGC PN V Y+ LIDG C++ K D+  E+L
Sbjct: 204 NVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELL 263

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M   G   N  +Y+ ++ G    G+  +   +  +M K     +EV Y+ LI G C++
Sbjct: 264 RSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKE 323

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQ 541
           G   +A ++  +ML  G  P V+ Y+S+IH +C AG++  A +  ++M    LC      
Sbjct: 324 GNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLC------ 377

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           P+  TY  L++   ++  ++ +  +L  M+D G  P +VT N  +           +G  
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALI-----------NGHC 426

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              ++               ++E M +K L+P   ++  V+   CR   +  A+
Sbjct: 427 IAGKMV----------DAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEAL 470



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 189/402 (47%), Gaps = 19/402 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI     +G+       L +MR       E+++  +   + +   + EA R+   M
Sbjct: 347 TYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEM 406

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +D       V ++N+++N     G    A+     + + K   + P+ ++++ V+   CR
Sbjct: 407 IDNGFSPSVV-TYNALINGHCIAGKMVDAIAV---LEDMKEKGLTPDVVSYSTVLSGFCR 462

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              VD A+++ R+M  +  +PD  TY +L+ G C++ R  EA  L DEM   G  P   T
Sbjct: 463 SYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFT 522

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LIN  C  G+L +A +L + M  KG LP+ VTY+ LI+GL  +    +A  LL ++ 
Sbjct: 523 YTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLF 582

Query: 325 ASKCMPNEVTYGTII---------------NGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             + +P++VTY T+I                G    G   +  +V  SM E+    +   
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTA 642

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ +I G  + G    A  L+K+M++ G   +TV   AL+  L + GK +E   ++  ++
Sbjct: 643 YNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVL 702

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            +   + A     L++     G     +++  +MAK+  + N
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 151/508 (29%), Positives = 264/508 (51%), Gaps = 31/508 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ ++ ++    LP+ + F  ++  V R+   D  I L+++M  +    DIY++  
Sbjct: 63  AIDLFSDMLRSRP---LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  ++L  A+    ++   G  P  VTF  L++GLC    +  A  L   MF   
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETT 179

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN VT+ TL++GLC +G + +AV+LLDRM+     P ++TYGTI++G+ K G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 353 RVLMSMEERKFHV-NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +L  MEE    + N  IYS +I  L K+G+  DA  L+ +M EKG  P+   Y+++I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C  G+  +AE++L EM+    + +  TY++L+  F + GK  +A E++ +M     + N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + YS +I G C+  +L  A  ++  M ++GC P+++ ++++I G C A  +++ ++L +
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
           EM   E     D  TYN L++      +++ ++DLL  M+  G  PD+VTC+  L  L  
Sbjct: 420 EM--TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 590 -----------------KEKLEA--PQDGTD----FLNELAIRLFKRQRTSGGFKIVEVM 626
                            K+ L+A  P +G +      N L   L    +     ++ E M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + + P T T+  ++  LC+  R+  A
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 248/506 (49%), Gaps = 49/506 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG-------LYHRALE--------FYN 178
           V EA+ LFH M  E  C+  V +F +++N + +EG       L  R +E         Y 
Sbjct: 165 VSEALNLFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 179 HIVNA------------------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
            IV+                   +  +I+PN + ++ +I ++C+ G   +A  LF EM  
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +   PD++TY +++ G C   R  +A  LL EM      P  VT+N LIN   K G+   
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A +L D M  +G +PN +TY+++I G C +  LD A  +   M    C PN +T+ T+I+
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G     R  DG  +L  M E     +   Y+TLI G +  G    A+ L ++M+  G  P
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMIN------------NGCAANAFTYSSLMKGFF 448
           + V    L+DGLC  GK  +A E +F+++             NG   +  TY+ L+ G  
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             GK  +A E++++M     V + + YS +I GLC+  +L EA  ++  M S+   P+VV
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            ++++I+G C AG V++ L+LF EM         +  TY  L+    K  NI+ ++D+  
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEM--GRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLE 594
            M+  G  PD +T    LT L  K E
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEE 666



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++NS++      G +  A +    ++  K   I P+ +T+N +I    + G    A +L+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  R   P+  TY +++DG CK+NRLD A  +   M   GC P  +TFN LI+G C  
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +    +L+  M   G + +  TYNTLIHG  L G+L+ A+ LL  M++S   P+ VT 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNE-----------YIYSTLISGLFKEGKAE 384
            T+++GL   G+  D   +   M++ K  ++              Y+ LISGL  EGK  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +L+++M  +G  P+T+ YS++IDGLC+  + DEA ++   M +   + N  T+++L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+ ++G+    +E++ +M +   V N + Y  LI G  + G +  A  ++ +M+S G  
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           PD +   +M+ GL +   ++ A+ +  ++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 200/440 (45%), Gaps = 21/440 (4%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L  G  +   L++A+ L  +M      P+ V F  L+  + +         L   M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              +  ++N LI   C    L  A+S   ++      P+ VT+ T+++GL    R  +  
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M E     N   ++TL++GL +EG+  +A+ L  +MME G +P  + Y  ++DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 413 CRVGKPDEAEEILFEMIN-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           C+ G    A  +L +M   +    N   YS+++    + G+   A  ++ +M +     +
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y+ +I G C  G+  +A  +  +ML R   PDVV Y+++I+     G   EA +L++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYD 349

Query: 532 EMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           EML   P+   P+  TY+ +++  CKQ+ +  +  +   M  +GC P+L+T N  +    
Sbjct: 350 EML---PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYC 406

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTS-----GGFKIV----------EVMLQKFLSPQT 635
              +   DG + L+E+         T+      GF +V          + M+   L P  
Sbjct: 407 GA-KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDI 465

Query: 636 STWERVVQELCRPKRIQAAI 655
            T + ++  LC   +++ A+
Sbjct: 466 VTCDTLLDGLCDNGKLKDAL 485



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 3/173 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V+++N +++ +I EG +  A E Y  +    H  I+P+T+T++ +I  +C+   +D A Q
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEM---PHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F  M  ++  P++ T+ TL++G CK  R+D+ + L  EM   G     +T+  LI G  
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           K G +  A  +   M   G  P+ +T   ++ GL  K  L +AV++L+++  S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/214 (19%), Positives = 92/214 (42%), Gaps = 23/214 (10%)

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L  GF E      A++++ DM ++  + + V +  L+  +    +      ++ +M  + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            + D+ +++ +I   C+   +  AL  F ++  L     PDV T+  LL+ LC +  +S 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFTTLLHGLCVEDRVSE 167

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           +++L + M +  C P++VT    +  L                      +  R      +
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGL---------------------CREGRIVEAVAL 206

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           ++ M++  L P   T+  +V  +C+     +A+N
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 267/535 (49%), Gaps = 50/535 (9%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN ++ ++   G    A E ++ +         PN  +F ++++  CR G     ++L 
Sbjct: 58  TFNVLIGLLCDSGCLDDARELFDKM---PEKGCEPNEYSFGILVRGYCRAGFTSKGLELL 114

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM      P+   Y TL+   CKE + D+A  L+DEM+ DG  P  VTFN  I+ LC +
Sbjct: 115 GEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSS 174

Query: 276 GELGRAAKLVDNMFLKGCL----PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           G++  A+++  +M +   L    PN +TYN ++ G C +G L++A +L ++M  S+ + N
Sbjct: 175 GKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMN 234

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             +Y   + GLV++G+ ++   VL  M +     N Y Y+ ++ GL K G   DA  L +
Sbjct: 235 RESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMR 294

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M   G  P+TV Y+ L+ G C  GK  EA  +L EM+ +GC+ N +T + L+   ++ G
Sbjct: 295 LMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEG 354

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG--------- 502
           +  +A E+ + M +   V + V  +++I GLC +GKL +A  +   M + G         
Sbjct: 355 RISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGN 414

Query: 503 --------------CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
                         C PD+++YS++I GLC AG V EA K F EM  +    QPD   Y+
Sbjct: 415 SYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEM--MGKNLQPDSAIYD 472

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL----------------KEK 592
           + +++ CK+  IS +  +L  M  +GC+  L T N  +  L                +E+
Sbjct: 473 VFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRER 532

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
             +P       N +   L +  R      +++ MLQK +SP  S++  +++  C+
Sbjct: 533 GVSPD--VSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCK 585



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 226/471 (47%), Gaps = 8/471 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+   +N+++++  + G VD    L ++M      P+ YT+  L+  LC    LD+A  L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M   GC P   +F +L+ G C+ G   +  +L+  M   G  PN+V YNTLI   C 
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF----HV 365
           +G  D A  L+D M      P+ VT+   I+ L   G+ ++ +R+   M+  +       
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y+ ++ G  KEG  E+A  L+++M       N   Y+  + GL R+GK  EA+ +L
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM++ G   N ++Y+ +M G  ++G    A  + + M  +  + + V Y+ L+HG C  
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           GK+ EA  V  +M+  GC P+    + +++ L   G + EA +L  +M   E     D  
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM--NEKGYVIDTV 376

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           T NI+++ LC    +  +I+++N M   G        N ++  + +     +   D ++ 
Sbjct: 377 TCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISY 436

Query: 606 LAI--RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             I   L K  R     K    M+ K L P ++ ++  +   C+  +I +A
Sbjct: 437 STIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 194/409 (47%), Gaps = 30/409 (7%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P+   +NVL+    K G +   + L  +M   G  P   T+N LI  LC  G LD A  L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            D+M    C PNE ++G ++ G  + G    G  +L  M    F  N+ +Y+TLIS   K
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA---- 435
           EGK +DA KL  +M + G  P+ V ++A I  LC  GK  EA  I  +M  +        
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  TY+ ++ GF + G   +A  +++ M  +  + N   Y++ + GL   GKL EA++V 
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M+  G +P+V +Y+ ++ GLC  G + +A  L    L       PD  TY  LL+  C
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMR--LMTSSGVLPDTVTYTTLLHGYC 316

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
               +S + ++L  MM  GC P+  TCNI L +                     L+K  R
Sbjct: 317 HTGKVSEANNVLREMMRDGCSPNNYTCNILLYS---------------------LWKEGR 355

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI---NKCWSN 661
            S   ++++ M +K     T T   V+  LC   ++  AI   N  W++
Sbjct: 356 ISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTH 404



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 155/605 (25%), Positives = 262/605 (43%), Gaps = 107/605 (17%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSG-DFKSLEMVLYRMRR---EKRVVLEKSFIF 123
           E+F+  P+ G  +  + +F  L++ Y  +G   K LE+ L  MRR       V+  + I 
Sbjct: 77  ELFDKMPEKGC-EPNEYSFGILVRGYCRAGFTSKGLEL-LGEMRRLGFSPNKVVYNTLIS 134

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFH---CKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
            F   GK    E+       +VDE         V +FN+ ++ +   G    A   +  +
Sbjct: 135 SFCKEGKTDDAEK-------LVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDM 187

Query: 181 VNAKHMNI-LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
              + + +  PN +T+NL++   C+ G+++ A  LF +M V     +  +Y   + GL +
Sbjct: 188 QIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVR 247

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             +L EA L+L EM   G  P   ++N++++GLCKNG L  A  L+  M   G LP+ VT
Sbjct: 248 IGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVT 307

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y TL+HG C  G + +A ++L  M+   C PN  T   ++  L K GR  +   +L  M 
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG---------------------- 397
           E+ + ++    + +I GL   GK + A+++   M   G                      
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427

Query: 398 -CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
            C P+ + YS +I GLC+ G+  EA++   EM+      ++  Y   +  F + GK   A
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGL---------------------------------- 482
             + KDM K  C      Y+ LI GL                                  
Sbjct: 488 FRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSS 547

Query: 483 -CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA---GSVEEALKL--------- 529
            CE G++++A  V  +ML +G  P++ ++S +I   C A    +V+E  ++         
Sbjct: 548 LCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKE 607

Query: 530 ------FNEML--------------CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
                 FNE+L               L+       F Y  L++ LCK   +  +  +L+ 
Sbjct: 608 ALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHK 667

Query: 570 MMDRG 574
           ++D+G
Sbjct: 668 LIDKG 672



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 121/517 (23%), Positives = 214/517 (41%), Gaps = 63/517 (12%)

Query: 76  LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVE 135
           LG  Q    T+  ++  +   G  +    +  +M+  + ++  +S+        +   + 
Sbjct: 193 LGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLL 252

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA  +   MVD    +  V S+N V++ + + G+   A      + ++    +LP+T+T+
Sbjct: 253 EAQLVLKEMVD-MGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSS---GVLPDTVTY 308

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM--------------------- 234
             ++   C  G V  A  + REM    C P+ YT   L+                     
Sbjct: 309 TTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNE 368

Query: 235 --------------DGLCKENRLDEAVLLLDEMQVDG----------------------- 257
                         DGLC   +LD+A+ +++ M   G                       
Sbjct: 369 KGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKK 428

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C P  ++++ +I+GLCK G +G A K    M  K   P+   Y+  IH  C +G +  A 
Sbjct: 429 CMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAF 488

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            +L  M    C     TY ++I GL    +  +   ++  M ER    +  IY+ ++S L
Sbjct: 489 RVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSL 548

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            + G+ +DA  +  +M++KG  PN   +S LI   C+       +EI FE+  N C    
Sbjct: 549 CEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEI-FEIALNVCGHKE 607

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             YS         G+  KA E+++     +       Y  LI  LC+D KL +A  +  +
Sbjct: 608 ALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHK 667

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           ++ +G   D  ++  +I GL   G+  EA +L  +M+
Sbjct: 668 LIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMM 704



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 147/400 (36%), Gaps = 90/400 (22%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  Y ++G       VL  M R+       +   +  +  K   + EA  L   M
Sbjct: 307 TYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKM 366

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI---------------- 188
            ++ +   TV + N V++ +   G   +A+E  N +       +                
Sbjct: 367 NEKGYVIDTV-TCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDS 425

Query: 189 ----LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
               +P+ ++++ +I  +C+ G V  A + F EM  +N +PD   Y   +   CKE ++ 
Sbjct: 426 RKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKIS 485

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            A  +L +M+  GC  T  T+N LI GL    ++     L+D M  +G  P+   YN ++
Sbjct: 486 SAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVL 545

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPN--------------------------------- 331
             LC  G +  A S+LD M+     PN                                 
Sbjct: 546 SSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGH 605

Query: 332 -EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS--------------- 375
            E  Y    N L+  G  V    +  +  +R F V  ++Y  LI                
Sbjct: 606 KEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGIL 665

Query: 376 --------------------GLFKEGKAEDAMKLWKQMME 395
                               GL K G   +A +L ++MME
Sbjct: 666 HKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  255 bits (652), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 161/490 (32%), Positives = 260/490 (53%), Gaps = 31/490 (6%)

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++ A       N +T+  +I   CR G +D+A++L   MPV    PD YTY T++ GLC
Sbjct: 145 RVLGAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPV---APDTYTYNTVLKGLC 201

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
              + +EA  L+ EM  + C P  VTF   I   C+NG L RA +L+D M   GC P+ V
Sbjct: 202 IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVV 261

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y+TLI+G   +G++D+A+ LL+ M+   C PN V Y   + GL    R  D   ++  M
Sbjct: 262 IYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEM 318

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             +    NE  +S LIS L +    + A+++ +QM + GC+P+TV Y+ +I+ L   G+ 
Sbjct: 319 VRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRV 378

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A  +L  M+   C  +A  +++++KGF  + + H A E+   M +++C   E+ +++L
Sbjct: 379 DDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNIL 435

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I  LC++G +  A  V+ QM    C PD+V YSS+++G    G VE A++LF  M C   
Sbjct: 436 IDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPC--- 492

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK------ 592
             +PD+F+YN +L  LC+ +    + +L+  M+ + C P+ VT NI + +L +K      
Sbjct: 493 --KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 550

Query: 593 ----LEAPQDGTD---FLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
                + P  G+    F     I  F  Q R     K++  M  K   P   ++   ++ 
Sbjct: 551 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKG 607

Query: 645 LCRPKRIQAA 654
           LCR +R Q A
Sbjct: 608 LCRAERWQDA 617



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 249/527 (47%), Gaps = 53/527 (10%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +L+  Y   G     E VL   R      +  ++  +   Y ++  +++A+RL  +M   
Sbjct: 129 TLVAGYCRDGRLADAERVLGAARATGAANV-VTYTALIDGYCRSGRLDDALRLIASM--- 184

Query: 148 FHCKRTVKSFNSVL-NVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
                   ++N+VL  + I +            I N       PN +TF   I++ C+ G
Sbjct: 185 -PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRN----RCPPNEVTFATQIRSFCQNG 239

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
           L+D A+QL  +MP   C PD+  Y TL++G  ++  +D+A+ LL+ M    C P  V +N
Sbjct: 240 LLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYN 296

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
             + GLC         +L+  M  KGC PNE T++ LI  LC    +D AV +L++M   
Sbjct: 297 AALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKY 356

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSM------------------EERKFHVNEY 368
            C P+ V Y  IIN L + GR  D  R+L SM                   ER    +E 
Sbjct: 357 GCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASEL 416

Query: 369 I--------------YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           I              ++ LI  L + G    A ++++QM    C P+ V YS+L++G   
Sbjct: 417 IAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSE 476

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G  + A ++   M    C  + F+Y++++KG   + +   A E+  +M   +C  NEV 
Sbjct: 477 QGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVT 533

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           +++LI+ LC+ G +  A  V  QM + G  PD+  Y+++I+G    G +++ALKL + M 
Sbjct: 534 FNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS 593

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           C     +PD  +YN  L  LC+      + +L+  M+   C P+ VT
Sbjct: 594 C-----KPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVT 635



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 221/436 (50%), Gaps = 22/436 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF + I+ +  +G       +L +M R      VV+  + I  F   G    V++A+ L 
Sbjct: 227 TFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGH---VDQALDLL 283

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           +TM+    CK     +N+ L  +     +    E    +V        PN  TF+++I +
Sbjct: 284 NTML----CKPNTVCYNAALKGLCIAERWEDIGELMAEMV---RKGCSPNEATFSMLISS 336

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+  LVD+A+++  +M    CEPD   Y  +++ L +  R+D+A+ LL+ M    C P 
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPD 393

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            + FN ++ G C+      A++L+  MF   C   E+T+N LI  LC  G ++ A  + +
Sbjct: 394 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFE 453

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +M   +C P+ VTY +++NG  + G      ++  SM  +    + + Y+ ++ GL +  
Sbjct: 454 QMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKP---DIFSYNAVLKGLCRAA 510

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + EDA +L  +M+ K C PN V ++ LI+ LC+ G  D A E+L +M N G   + FTY+
Sbjct: 511 RWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 570

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ GF E G+   A+++   M+   C  + + Y+  + GLC   + ++A  +  +ML  
Sbjct: 571 ALINGFSEQGRLDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRN 627

Query: 502 GCKPDVVAYSSMIHGL 517
            C P+ V +    H L
Sbjct: 628 KCTPNEVTFKYANHLL 643



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 196/444 (44%), Gaps = 71/444 (15%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           ++ N+LI  LC  G L  A + V +        + V++NTL+ G C  G L  A  +L  
Sbjct: 91  ISCNILIKKLCATGRLADAER-VLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME----------------------- 359
             A+    N VTY  +I+G  + GR  D  R++ SM                        
Sbjct: 150 ARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLCIAKKWEE 208

Query: 360 ---------ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
                      +   NE  ++T I    + G  + A++L  QM   GC P+ V+YS LI+
Sbjct: 209 AEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLIN 268

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G    G  D+A ++L  M+   C  N   Y++ +KG   + +     E+  +M +  C  
Sbjct: 269 GFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSP 325

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           NE  +S+LI  LC++  +  A  V  QM   GC+PD V Y+ +I+ L   G V++AL+L 
Sbjct: 326 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           N M+C     +PD   +N +L   C+      + +L+  M    C    +T NI +  L 
Sbjct: 386 NSMVC-----KPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLC 440

Query: 591 EKLEAPQDGTDFLNELAIRLFK---RQRTS----------GGFK---IVEVMLQKFLS-- 632
                 Q+G   L   A ++F+   R R +           GF    +VEV +Q F S  
Sbjct: 441 ------QNG---LVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP 491

Query: 633 --PQTSTWERVVQELCRPKRIQAA 654
             P   ++  V++ LCR  R + A
Sbjct: 492 CKPDIFSYNAVLKGLCRAARWEDA 515



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 94/230 (40%), Gaps = 54/230 (23%)

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V ++ L+ G C DG+L +A  V     + G   +VV Y+++I G C +G +++AL+L   
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATGAA-NVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 533 MLCLEPKSQPDVFTYNILLNAL-----------------------------------CKQ 557
           M        PD +TYN +L  L                                   C+ 
Sbjct: 184 M-----PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQN 238

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR-------- 609
             +  ++ LL+ M   GC PD+V  +  +    E+    Q   D LN +  +        
Sbjct: 239 GLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQ-ALDLLNTMLCKPNTVCYNA 297

Query: 610 ----LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
               L   +R     +++  M++K  SP  +T+  ++  LC+   + +A+
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAV 347


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 156/549 (28%), Positives = 275/549 (50%), Gaps = 51/549 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG-------LYHRALE-------FYNH 179
           ++EA + F++M+D   C+  V +F ++++   + G       L ++AL+        Y  
Sbjct: 23  MDEAYKFFNSMIDN-GCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKRFRPDVFLYTS 81

Query: 180 IVN----AKHMN------ILP----NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP 225
           +++    A  ++      + P    + +++  VIK +     +D A +LF E+    C P
Sbjct: 82  VIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEELKTAGCSP 141

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           ++  Y  ++DGL K  R+++ +   +EM    C PT  T+ V+I+GLCK   L  A K+ 
Sbjct: 142 NVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVF 201

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
           + M  KGC+P+ +TY TLI G      +D+A  LLD M+     P  VTYG+I++G  KL
Sbjct: 202 EQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKL 261

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
               +   V+  M ER      +I+++L+S    +G+AE+A ++  +M  +GC P+ ++Y
Sbjct: 262 DMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILY 321

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           ++LID L   G+  EA  +   MI  GCA +A TY ++++ F + G    A EI + MAK
Sbjct: 322 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 381

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
           +    +   Y+ L+ G  +  ++ +A  V+ +M++ G KP+ V ++ ++HGL   G  + 
Sbjct: 382 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 441

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A  LF EML  E +  P + +Y IL++ L K   +S +      M+DRG  P+   C+ +
Sbjct: 442 AFSLFKEMLEKE-EVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPE---CHTY 497

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
                               L   L K  R     K+VE M++  ++P    +  ++  L
Sbjct: 498 ------------------TSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 539

Query: 646 CRPKRIQAA 654
                +  A
Sbjct: 540 IDSSMVDTA 548



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 257/501 (51%), Gaps = 10/501 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + S+I  Y  +GD   L+   +R    K  +   S+  + K    +  ++EA  LF  + 
Sbjct: 79  YTSVIHGYCKAGD---LDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELFEEL- 134

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
               C   V ++ +V++ +++ G     L+ +  +  +   + +P   T+ +VI  +C+ 
Sbjct: 135 KTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGS---SCVPTRTTYTVVIDGLCKA 191

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
            ++ +A ++F +M  + C PD  TY TL+DG  K +++DEA  LLD M   G  PT VT+
Sbjct: 192 QMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTY 251

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             +++G CK   +  A +++  M  +GC P    + +L+     KG  ++A  +L  M A
Sbjct: 252 GSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTA 311

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
             C P+ + Y ++I+ L   GR  +   V  SM E+    +   Y T+I    K G  E 
Sbjct: 312 RGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEA 371

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A ++ + M + G  P+   Y++L+DG  ++ + D+A  +   M+ +G   NA T++ LM 
Sbjct: 372 AGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMH 431

Query: 446 GFFESGKGHKAVEIWKDM-AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           G F+ GK  +A  ++K+M  K       V Y++LI GL + G++ EA + + +M+ RG  
Sbjct: 432 GLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGII 491

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P+   Y+S+I+ L  AG + EA KL  +M+ L     PDV  Y+ L+  L   S +  + 
Sbjct: 492 PECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL--GVNPDVQAYSALITGLIDSSMVDTAW 549

Query: 565 DLLNSMMDRGCDPDLVTCNIF 585
           D+   MM RGC P+ VT  + 
Sbjct: 550 DVFQEMMKRGCAPNEVTYKVL 570



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 231/518 (44%), Gaps = 54/518 (10%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M   P  +++N VI  +  +  +D A + F  M    CEPD+  + TL+ G CK  +   
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL--------------------------- 278
              LL++  +    P    +  +I+G CK G+L                           
Sbjct: 61  GHKLLNQ-ALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119

Query: 279 -----GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
                  A +L + +   GC PN V Y  +I GL   G ++  +   + M  S C+P   
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+GL K     D  +V   M ++    +   Y+TLI G  K  K ++A KL   M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + KG +P  V Y +++ G C++   +EA+E++ +M   GC    F ++SL+  +   G+ 
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A ++  +M    C  + + Y+ LI  L   G++ EAR V+  M+ +GC PD + Y ++
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           I      G+VE A     E+L L  KS   PD F YN L++   K   +  +  + + M+
Sbjct: 360 IQNFSKIGNVEAA----GEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415

Query: 572 DRGCDPDLVTCNIFLTAL-------------KEKLEAPQDGTDFLNE--LAIRLFKRQRT 616
             G  P+ VT N+ +  L             KE LE  +     ++   L   L K  R 
Sbjct: 416 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRV 475

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           S  F   + M+ + + P+  T+  ++  L +  RI  A
Sbjct: 476 SEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEA 513



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 211/449 (46%), Gaps = 20/449 (4%)

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
            CEP I +Y T++ GL   +++DEA    + M  +GC P  + F  LI+G CK G+    
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            KL+ N  LK   P+   Y ++IHG C  G+LD       R V  K   + ++Y T+I G
Sbjct: 62  HKLL-NQALKRFRPDVFLYTSVIHGYCKAGDLDTGYF---RAVTPKASLDVISYTTVIKG 117

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L    R  +   +   ++      N   Y+ +I GL K G+ ED +K +++M    C P 
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
              Y+ +IDGLC+     +A ++  +M+  GC  +  TY++L+ GF ++ K  +A ++  
Sbjct: 178 RTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLD 237

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            M         V Y  ++HG C+   + EA+ V  QM  RGC+P +  ++S++    + G
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
             EEA ++  EM        PDV  Y  L++ L     +  +  + +SM+++GC PD +T
Sbjct: 298 RAEEAYQVLTEMTAR--GCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355

Query: 582 CNIFLTALKE--KLEAPQD----------GTDFL--NELAIRLFKRQRTSGGFKIVEVML 627
               +    +   +EA  +          G D    N L     K +R    F + + M+
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              + P   T+  ++  L +  +   A +
Sbjct: 416 ASGIKPNAVTFNVLMHGLFKDGKTDRAFS 444



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 212/425 (49%), Gaps = 8/425 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +     KA ++ +A ++F  MV +  C     ++ ++++   +      A +  + 
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQK-GCVPDTITYTTLIDGFSKASKMDEARKLLDV 238

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++        P  +T+  ++   C+L +++ A ++  +M  R CEP ++ + +L+     
Sbjct: 239 MLTKGPE---PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLS 295

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           + R +EA  +L EM   GC P  + +  LI+ L   G +  A  + D+M  KGC P+ +T
Sbjct: 296 KGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALT 355

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y T+I      GN++ A  +L+ M  S   P+   Y ++++G VKL R      V   M 
Sbjct: 356 YGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMV 415

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV-YSALIDGLCRVGKP 418
                 N   ++ L+ GLFK+GK + A  L+K+M+EK   P T+V Y+ LIDGL + G+ 
Sbjct: 416 ASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRV 475

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA     EMI+ G      TY+SL+    ++G+  +A ++ +DM K     +   YS L
Sbjct: 476 SEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSAL 535

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG---SVEEALKLFNEMLC 535
           I GL +   +  A  V+ +M+ RGC P+ V Y  +  G   AG    +E   + F++ + 
Sbjct: 536 ITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDLEAVKQHFSQGVA 595

Query: 536 LEPKS 540
           +E  S
Sbjct: 596 MEAGS 600



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 171/369 (46%), Gaps = 5/369 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  ++ +        +L  M  +       ++  I   + K  ++ EA  +   M
Sbjct: 215 TYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQM 274

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E  C+  +  F S+L+  + +G   RA E Y  +         P+ + +  +I  +  
Sbjct: 275 -RERGCEPGLFIFTSLLSYYLSKG---RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFS 330

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A  +F  M  + C PD  TY T++    K   ++ A  +L+ M   G  P    
Sbjct: 331 TGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFA 390

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++G  K   + +A  + D M   G  PN VT+N L+HGL   G  D+A SL   M+
Sbjct: 391 YNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEML 450

Query: 325 ASKCMPNE-VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             + +P   V+Y  +I+GL K GR  +       M +R      + Y++LI  L K G+ 
Sbjct: 451 EKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRI 510

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +A KL + M++ G  P+   YSALI GL      D A ++  EM+  GCA N  TY  L
Sbjct: 511 PEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVL 570

Query: 444 MKGFFESGK 452
            +GF  +G+
Sbjct: 571 RRGFRAAGR 579


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 161/557 (28%), Positives = 279/557 (50%), Gaps = 42/557 (7%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +F+S  +   Y      F  +++  ++      +  ++  ++ +K    E   + + KAY
Sbjct: 29  LFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVLTVLKAY 88

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            K+ +  EA+  F  M + F CK  ++S+N++LN  I+  L  +A  F  +    + + I
Sbjct: 89  AKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYF---ETVGI 145

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LPN  T+N++IK   +      A  L   M  ++ +PD+Y+Y T+++G+ K   L  A+ 
Sbjct: 146 LPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALE 205

Query: 249 LLDEM--------------QVDGCF----------------------PTPVTFNVLINGL 272
           + DEM               +DG F                      P  VT+NV+INGL
Sbjct: 206 VFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGL 265

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G    + ++ + M    C  +  TY++LI GLC  GN+D AV +   MV    + + 
Sbjct: 266 CKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDV 325

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY  ++NG  + G+  +   + + M +   H N   Y+  I GLF+  K E+A+ +W+ 
Sbjct: 326 VTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWEL 384

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           +  +G   ++  Y  LI GLC+ G  ++A +IL E  + G   +AF YSS++ G  + G+
Sbjct: 385 LRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGR 444

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A+ I   M K  C  +    + LI+G     KL EA   + +M ++GC P VV+Y++
Sbjct: 445 VDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNT 504

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I+GLC A    +A     EM  LE   +PD+ TY++L++ LC+   I  +++L   ++ 
Sbjct: 505 LINGLCKAERFSDAYSFVKEM--LEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLV 562

Query: 573 RGCDPDLVTCNIFLTAL 589
           +G +PD+   NI +  L
Sbjct: 563 KGLEPDVTMHNILMHGL 579



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 148/551 (26%), Positives = 276/551 (50%), Gaps = 34/551 (6%)

Query: 67  DEIFNSTPKLGSYQLGDSTFY---------SLIQHYANSGDFKSLEM--VLYRMRREKRV 115
           +EIF   P + SY    + F          S + ++   G   +L+   +L ++  +KR 
Sbjct: 105 EEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQ 164

Query: 116 VLEK-----------------SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
            +E                  S+  +     K+  +  A+ +F  M  E      V  +N
Sbjct: 165 FVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMF-ERGLVPDVMCYN 223

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
            +++   + G Y +  E +  +V  K   + PN +T+N++I  +C++G  D +++++  M
Sbjct: 224 IMIDGFFKRGDYVQGKEIWERLV--KGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERM 281

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
               CE D++TY +L+ GLC    +D AV +  EM         VT+N L+NG C+ G++
Sbjct: 282 KKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKI 341

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             + +L   M  + C  N V+YN  I GL     +++A+S+ + +       +  TYG +
Sbjct: 342 KESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVL 400

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+GL K G      ++L   ++    ++ + YS+++ GL K+G+ ++A+ +  QM + GC
Sbjct: 401 IHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGC 460

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
           + +  V + LI+G  R  K +EA     EM   GC+    +Y++L+ G  ++ +   A  
Sbjct: 461 ELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYS 520

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
             K+M + +   + + YS+L+ GLC+  K+  A  +W Q+L +G +PDV  ++ ++HGLC
Sbjct: 521 FVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLC 580

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           +AG +E+AL L++ M   +    P++ T+N L++ L K      +  +   M   G  PD
Sbjct: 581 SAGKIEDALLLYSNM--KQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPD 638

Query: 579 LVTCNIFLTAL 589
           +++ NI L  L
Sbjct: 639 IISYNITLKGL 649



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 223/422 (52%), Gaps = 7/422 (1%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +E++ ++  M  +  C+  + +++S++  +   G    A+E Y  +V     +++ + +T
Sbjct: 272 DESLEMWERM-KKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKR---SVVVDVVT 327

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N ++   CR G +  + +L+  M   NC  ++ +Y   + GL +  +++EA+ + + ++
Sbjct: 328 YNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKVEEAISVWELLR 386

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G      T+ VLI+GLCKNG L +A K++      G   +   Y++++ GL  +G +D
Sbjct: 387 RRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVD 446

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A+ ++ +M    C  +      +ING V+  +  +       ME +        Y+TLI
Sbjct: 447 EALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLI 506

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +GL K  +  DA    K+M+EK  KP+ + YS L+DGLC+  K D A  +  +++  G  
Sbjct: 507 NGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLE 566

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +   ++ LM G   +GK   A+ ++ +M ++NC+ N V ++ L+ GL +  +   A ++
Sbjct: 567 PDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVI 626

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           W  M   G +PD+++Y+  + GLC+ G + + + LF++   L+    P   T+ IL+ A+
Sbjct: 627 WACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDD--ALKNGILPTSITWYILVRAV 684

Query: 555 CK 556
            K
Sbjct: 685 LK 686



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 190/391 (48%), Gaps = 5/391 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+ A+ ++  MV        V ++N++LN   + G    + E +  +      N++    
Sbjct: 306 VDGAVEVYKEMVKR-SVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNVV---- 360

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N+ I+ +     V+ AI ++  +  R    D  TY  L+ GLCK   L++A+ +L E 
Sbjct: 361 SYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEA 420

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G       ++ +++GL K G +  A  +V  M   GC  +    N LI+G      L
Sbjct: 421 KDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKL 480

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           ++A+     M    C P  V+Y T+INGL K  R  D    +  M E+ +  +   YS L
Sbjct: 481 EEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLL 540

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL +  K + A+ LW+Q++ KG +P+  +++ L+ GLC  GK ++A  +   M  + C
Sbjct: 541 MDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNC 600

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  T+++LM G +++ +   A  IW  M KN    + + Y++ + GLC  G++ +   
Sbjct: 601 LPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIA 660

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           ++   L  G  P  + +  ++  +   G ++
Sbjct: 661 LFDDALKNGILPTSITWYILVRAVLKLGPLD 691


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 155/496 (31%), Positives = 260/496 (52%), Gaps = 8/496 (1%)

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE--FHCKRTVKSFN 158
           ++++VL RM     +    S+  + K     +  +EA+ L H M D+        V S+ 
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           +V+N   +EG   +A   Y+ +++     ILP+ +T+N +I  +C+   +D A+++   M
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDR---GILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                 PD  TY +++ G C   +  EA+  L +M+ DG  P  VT+++L++ LCKNG  
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A K+ D+M  +G  P   TY TL+ G   KG L +   LLD MV +   P+   +  +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I    K G+      V   M ++  + N   Y  +I  L K G+ EDAM  ++QM+++G 
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P  +VY++LI GLC   K + AEE++ EM++ G   N   ++S++    + G+  ++ +
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +++ M +     N + Y+ LI+G C  GK+ EA  + + M+S G KP+ V YS++I+G C
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
               +E+AL LF EM        PD+ TYNI+L  L +    + + +L   + + G   +
Sbjct: 558 KISRMEDALVLFKEM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615

Query: 579 LVTCNIFLTAL-KEKL 593
           L T NI L  L K KL
Sbjct: 616 LSTYNIILHGLCKNKL 631



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 149/547 (27%), Positives = 264/547 (48%), Gaps = 27/547 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + K         +A+ +    + E  C   V S+N +L  +  E     ALE  + 
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + + +     P+ +++  VI    + G  D A   + EM  R   PD+ TY +++  LCK
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              +D+A+ +L+ M  +G  P  +T+N +++G C +G+   A   +  M   G  P+ VT
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+ L+  LC  G   +A  + D M      P   TYGT++ G    G  V+   +L  M 
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
               H + Y++S LI    K+GK + AM ++ +M ++G  PN V Y A+I  LC+ G+ +
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A     +MI+ G +     Y+SL+ G     K  +A E+  +M       N + ++ +I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
              C++G++ E+  ++  M+  G KP+V+ Y+++I+G C AG ++EA+KL + M+ +  K
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             P+  TY+ L+N  CK S +  ++ L   M   G  PD++T NI L             
Sbjct: 544 --PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQG----------- 590

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI---- 655
                     LF+ +RT+   ++   + +     + ST+  ++  LC+ K    A+    
Sbjct: 591 ----------LFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640

Query: 656 NKCWSNL 662
           N C  +L
Sbjct: 641 NLCLMDL 647



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 242/507 (47%), Gaps = 10/507 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ S++  Y +SG  K     L +MR +       ++  +     K     EA ++F +M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIKTVC 203
                 KR +K   +    ++Q      AL   + +++    N I P+   F+++I    
Sbjct: 328 T-----KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G VD A+ +F +M  +   P+  TY  ++  LCK  R+++A+L  ++M  +G  P  +
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N LI+GLC   +  RA +L+  M  +G   N + +N++I   C +G + ++  L + M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V     PN +TY T+ING    G+  +  ++L  M       N   YSTLI+G  K  + 
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           EDA+ L+K+M   G  P+ + Y+ ++ GL +  +   A+E+   +  +G      TY+ +
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  ++     A+++++++   +       ++++I  L + G+  EA+ ++    S G 
Sbjct: 623 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISH 562
            P+   Y  M   +   G +EE  +LF   L +E      D    N ++  L ++  I+ 
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLF---LSMEDNGCTVDSGMLNFIVRELLQRGEITR 739

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +   L+ + ++    +  T ++F+  L
Sbjct: 740 AGTYLSMIDEKHFSLEASTASLFIDLL 766


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 161/490 (32%), Positives = 260/490 (53%), Gaps = 31/490 (6%)

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++ A       N +T+  +I   CR G +D+A++L   MPV    PD YTY T++ GLC
Sbjct: 145 RVLGAARATGAANVVTYTALIDGYCRSGRLDDALRLIASMPV---APDTYTYNTVLKGLC 201

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
              + +EA  L+ EM  + C P  VTF   I   C+NG L RA +L+D M   GC P+ V
Sbjct: 202 IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVV 261

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y+TLI+G   +G++D+A+ LL+ M+   C PN V Y   + GL    R  D   ++  M
Sbjct: 262 IYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEM 318

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             +    NE  +S LIS L +    + A+++ +QM + GC+P+TV Y+ +I+ L   G+ 
Sbjct: 319 VRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRV 378

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A  +L  M+   C  +A  +++++KGF  + + H A E+   M +++C   E+ +++L
Sbjct: 379 DDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNIL 435

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I  LC++G +  A  V+ QM    C PD+V YSS+++G    G VE A++LF  M C   
Sbjct: 436 IDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPC--- 492

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK------ 592
             +PD+F+YN +L  LC+ +    + +L+  M+ + C P+ VT NI + +L +K      
Sbjct: 493 --KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRA 550

Query: 593 ----LEAPQDGTD---FLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
                + P  G+    F     I  F  Q R     K++  M  K   P   ++   ++ 
Sbjct: 551 IEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSCK---PDAISYNSTLKG 607

Query: 645 LCRPKRIQAA 654
           LCR +R Q A
Sbjct: 608 LCRAERWQDA 617



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 249/527 (47%), Gaps = 53/527 (10%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +L+  Y   G     E VL   R      +  ++  +   Y ++  +++A+RL  +M   
Sbjct: 129 TLVAGYCRDGRLADAERVLGAARATGAANV-VTYTALIDGYCRSGRLDDALRLIASM--- 184

Query: 148 FHCKRTVKSFNSVL-NVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
                   ++N+VL  + I +            I N       PN +TF   I++ C+ G
Sbjct: 185 -PVAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRN----RCPPNEVTFATQIRSFCQNG 239

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
           L+D A+QL  +MP   C PD+  Y TL++G  ++  +D+A+ LL+ M    C P  V +N
Sbjct: 240 LLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYN 296

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
             + GLC         +L+  M  KGC PNE T++ LI  LC    +D AV +L++M   
Sbjct: 297 AALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKY 356

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSM------------------EERKFHVNEY 368
            C P+ V Y  IIN L + GR  D  R+L SM                   ER    +E 
Sbjct: 357 GCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNAVLKGFCRAERWHDASEL 416

Query: 369 I--------------YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           I              ++ LI  L + G    A ++++QM    C P+ V YS+L++G   
Sbjct: 417 IAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSE 476

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G  + A ++   M    C  + F+Y++++KG   + +   A E+  +M   +C  NEV 
Sbjct: 477 QGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVT 533

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           +++LI+ LC+ G +  A  V  QM + G  PD+  Y+++I+G    G +++ALKL + M 
Sbjct: 534 FNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMS 593

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           C     +PD  +YN  L  LC+      + +L+  M+   C P+ VT
Sbjct: 594 C-----KPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVT 635



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 221/436 (50%), Gaps = 22/436 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF + I+ +  +G       +L +M R      VV+  + I  F   G    V++A+ L 
Sbjct: 227 TFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGH---VDQALDLL 283

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           +TM+    CK     +N+ L  +     +    E    +V        PN  TF+++I +
Sbjct: 284 NTML----CKPNTVCYNAALKGLCIAERWEDIGELMAEMV---RKGCSPNEATFSMLISS 336

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+  LVD+A+++  +M    CEPD   Y  +++ L +  R+D+A+ LL+ M    C P 
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPD 393

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            + FN ++ G C+      A++L+  MF   C   E+T+N LI  LC  G ++ A  + +
Sbjct: 394 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFE 453

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +M   +C P+ VTY +++NG  + G      ++  SM  +    + + Y+ ++ GL +  
Sbjct: 454 QMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKP---DIFSYNAVLKGLCRAA 510

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + EDA +L  +M+ K C PN V ++ LI+ LC+ G  D A E+L +M N G   + FTY+
Sbjct: 511 RWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 570

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ GF E G+   A+++   M+   C  + + Y+  + GLC   + ++A  +  +ML  
Sbjct: 571 ALINGFSEQGRLDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRN 627

Query: 502 GCKPDVVAYSSMIHGL 517
            C P+ V +    H L
Sbjct: 628 KCTPNEVTFKYANHLL 643



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 195/444 (43%), Gaps = 71/444 (15%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           ++ N+LI  LC    L  A + V +        + V++NTL+ G C  G L  A  +L  
Sbjct: 91  ISCNILIKKLCATRRLADAER-VLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME----------------------- 359
             A+    N VTY  +I+G  + GR  D  R++ SM                        
Sbjct: 150 ARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASMPVAPDTYTYNTVLKGLCIAKKWEE 208

Query: 360 ---------ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
                      +   NE  ++T I    + G  + A++L  QM   GC P+ V+YS LI+
Sbjct: 209 AEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLIN 268

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G    G  D+A ++L  M+   C  N   Y++ +KG   + +     E+  +M +  C  
Sbjct: 269 GFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSP 325

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           NE  +S+LI  LC++  +  A  V  QM   GC+PD V Y+ +I+ L   G V++AL+L 
Sbjct: 326 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           N M+C     +PD   +N +L   C+      + +L+  M    C    +T NI +  L 
Sbjct: 386 NSMVC-----KPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLC 440

Query: 591 EKLEAPQDGTDFLNELAIRLFK---RQRTS----------GGFK---IVEVMLQKFLS-- 632
                 Q+G   L   A ++F+   R R +           GF    +VEV +Q F S  
Sbjct: 441 ------QNG---LVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP 491

Query: 633 --PQTSTWERVVQELCRPKRIQAA 654
             P   ++  V++ LCR  R + A
Sbjct: 492 CKPDIFSYNAVLKGLCRAARWEDA 515


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  255 bits (651), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 161/514 (31%), Positives = 257/514 (50%), Gaps = 9/514 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + ++I      G+    E ++ ++   +      ++  +   + + H ++ A+++F+ M 
Sbjct: 388 YNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMA 447

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E  C+    ++++++N +   G  + A +    ++      ILP   T    I  +C +
Sbjct: 448 KE-GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI---LHGILPTAHTCTGPIIALCDM 503

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G  ++A +LF +M  + CEP++YTY  L+ GLC    L  A+ L   M  DG FP  VT+
Sbjct: 504 GCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTY 563

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N LIN L +N  +  A  +++ M   G   N VTYN +I G C+ G+  KA+ +++ M+ 
Sbjct: 564 NALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQ 623

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
                N VTY TII G    G      R+L  M +     +E+ Y+ LI G  K  K E 
Sbjct: 624 RGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMES 683

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A  L+ +M++ G  PN V Y+ALIDG C+  K D A  +L  M  +GC  N  TY+ L+ 
Sbjct: 684 AFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIH 743

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G  +      A E+ K M +     N V Y+ +I GLC++G    A  ++ +M+ +GC P
Sbjct: 744 GLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLP 803

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNISHSI 564
           +++ YSS+I  L   G VEEA  LF E   LE     PD  TY  ++ A      + H+ 
Sbjct: 804 NLLTYSSLIRALGQEGKVEEAENLFAE---LERHGLIPDEITYVKMIEAYIMSGKVEHAF 860

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALK-EKLEAPQ 597
           + L  M+  GC P L T  + +  LK E L A Q
Sbjct: 861 NFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQ 894



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 218/455 (47%), Gaps = 23/455 (5%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
             ++ ++  + RLG+    +  +  M     +P++  Y  +++ LCK+  + +A  ++ +
Sbjct: 351 FAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKK 410

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +      P   T+  +I G C+  +L  A ++ + M  +GC PN VTY+TLI+GLC  G 
Sbjct: 411 VFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGR 470

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +++A  L+  M+    +P   T    I  L  +G   D  R+ + M+ +    N Y Y+ 
Sbjct: 471 VNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTA 530

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LISGL   G  + A+ L+ +M   G  PNTV Y+ALI+ L    +   A  +L  M  NG
Sbjct: 531 LISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNG 590

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  TY+ ++KG+   G   KA+ +  +M +     N V Y+ +I G C+ G    A 
Sbjct: 591 LFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSAL 650

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +   M   GCKPD  +Y+ +I G C    +E A  LFNEM  ++    P+  TY  L++
Sbjct: 651 RILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM--VDDGLCPNEVTYTALID 708

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             CK   +  +  LL  M   GC P++ T N+ +  L                      K
Sbjct: 709 GYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLT---------------------K 747

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           +   SG  ++ +VM+++ + P   T+  ++  LC+
Sbjct: 748 QNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCK 782



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 221/475 (46%), Gaps = 38/475 (8%)

Query: 133  LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPN 191
            L++ AI LFH M  +     TV ++N+++N++++    +R +++   ++N    N +  N
Sbjct: 540  LLKVAIGLFHRMSRDGVFPNTV-TYNALINILVE----NRRIKYAFVVLNLMGRNGLFTN 594

Query: 192  TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             +T+N +IK  C LG    A+ +   M  R    ++ TY T++ G C       A+ +LD
Sbjct: 595  IVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILD 654

Query: 252  EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
             M+  GC P   ++  LI G CK  ++  A  L + M   G  PNEVTY  LI G C   
Sbjct: 655  LMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDE 714

Query: 312  NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
             LD A SLL+ M  S C PN  TY  +I+GL K         +   M E     N   Y+
Sbjct: 715  KLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYT 774

Query: 372  TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
             +I GL K G    A++++ +M+E+GC PN + YS+LI  L + GK +EAE +  E+  +
Sbjct: 775  AMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERH 834

Query: 432  GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
            G   +  TY  +++ +  SGK   A      M K  C      Y VLI GL  +  L + 
Sbjct: 835  GLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQ 894

Query: 492  RMVWTQMLSRGCK-------PDVVAYSS-----------------MIHGLCNAGSVEEAL 527
            R+     +   C         D V+  S                 ++  L  AG   EA 
Sbjct: 895  RLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEAN 954

Query: 528  KLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            +L   M+     SQ   PD   YN LL +L +  N+  ++ +   M  +GC+  L
Sbjct: 955  ELLGSMI-----SQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHL 1004



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 129/497 (25%), Positives = 214/497 (43%), Gaps = 30/497 (6%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            T+  +I+ Y   GD K   +V+  M +        ++  I K Y  +     A+R+   M
Sbjct: 597  TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 656

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             D   CK    S+  ++    +      A   +N +V+     + PN +T+  +I   C+
Sbjct: 657  RDG-GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD---GLCPNEVTYTALIDGYCK 712

Query: 205  LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               +D A  L   M    C P++ TY  L+ GL K+N    A  L   M  +G FP  VT
Sbjct: 713  DEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVT 772

Query: 265  FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            +  +I+GLCKNG    A ++ + M  +GCLPN +TY++LI  L  +G +++A +L   + 
Sbjct: 773  YTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELE 832

Query: 325  ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE---- 380
                +P+E+TY  +I   +  G+       L  M +       + Y  LI GL  E    
Sbjct: 833  RHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLA 892

Query: 381  -------------------GKAEDAMKLWK-QMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                                  +DA+ +   ++ E     +  V +AL+  L   G+  E
Sbjct: 893  DQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFE 952

Query: 421  AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
            A E+L  MI+ G   +   Y+SL+           A+ ++K M+   C  +   Y  LI 
Sbjct: 953  ANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELIC 1012

Query: 481  GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
             LC+  + +EAR+ +  ML R   PD V  + +I GL   G  +  ++  + M     + 
Sbjct: 1013 ALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIM--ETRRY 1070

Query: 541  QPDVFTYNILLNALCKQ 557
             P    Y IL     K+
Sbjct: 1071 MPSFHIYTILAREASKK 1087



 Score = 45.8 bits (107), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 34/175 (19%), Positives = 69/175 (39%), Gaps = 24/175 (13%)

Query: 483 CEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           C   +     M +  MLS+ G +  + AYS+++  L   G     +  ++ ML      Q
Sbjct: 325 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRML--SEGVQ 382

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           P++  YN ++NALCK  N++ +  ++  + +    PD  T                    
Sbjct: 383 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFT-------------------- 422

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
               + +   ++       ++   M ++   P T T+  ++  LC   R+  A +
Sbjct: 423 -YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 476


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 157/508 (30%), Positives = 263/508 (51%), Gaps = 8/508 (1%)

Query: 85  TFYSLIQHY-ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           TF  L++   A+     ++++VL RM     +    S+  + K     +  +EA+ L H 
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 144 MVDE--FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           M D+        V S+N+VLN   +EG   +A   Y+ +++     ILP+ +T++ +I  
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLD---RGILPDVVTYSSIIAA 245

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+   +D A+++   M      PD  TY +++ G C   +  EA+  L +M+ DG  P 
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT++ L+N LCKNG    A K+ D+M  +G  P+  TY TL+ G   KG L +  +LLD
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 365

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            MV +   P+   +  +I    K  +      V   M +   + N   Y T+I  L K G
Sbjct: 366 LMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 425

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             +DAM  ++QM+++G  PN +VY++LI GLC   K D+AEE++ EM++ G   N   ++
Sbjct: 426 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFN 485

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           S++    + G+  ++ +++  M +     + + Y+ LI G C  GK+ EA  +   M+S 
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G KPD+V Y ++I+G C    +++AL LF EM  +     P++ TYNI+L  L      +
Sbjct: 546 GVKPDIVTYGTLINGYCRVSRMDDALALFKEM--VSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            + +L  S+   G   +L T NI L  L
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGL 631



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 261/547 (47%), Gaps = 27/547 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + K         +A+ +    + E  C   V S+N++L  +  E     ALE  + 
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + + +     P+ +++N V+    + G  D A   + EM  R   PD+ TY +++  LCK
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              +D+A+ +L+ M  +G  P  +T+N +++G C +G+   A   +  M   G  PN VT
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y++L++ LC  G   +A  + D M      P+  TY T++ G    G  V+   +L  M 
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 + ++++ LI    K+ K + AM ++ +M + G  PN V Y  +ID LC+ G  D
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A     +MI+ G   N   Y+SL+ G     K  KA E+  +M       N + ++ +I
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
              C++G++ E+  ++  M+  G KPD++ Y+++I G C AG ++EA KL   M+ +  K
Sbjct: 489 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK 548

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             PD+ TY  L+N  C+ S +  ++ L   M+  G  P+++T NI L             
Sbjct: 549 --PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG----------- 595

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI---- 655
                     LF  +RT+   ++   + +     + ST+  ++  LC+      A+    
Sbjct: 596 ----------LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 645

Query: 656 NKCWSNL 662
           N C ++L
Sbjct: 646 NLCLTDL 652



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 238/473 (50%), Gaps = 6/473 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I  A  KA  +++A+ + +TMV          ++NS+L+     G    A+     
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKEAI---GT 293

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   +   + PN +T++ ++  +C+ G    A ++F  M  R  EPDI TY TL+ G   
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +  L E   LLD M  +G  P    FN+LI    K  ++ +A  +   M   G  PN V 
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y T+I  LC  G++D A+   ++M+     PN + Y ++I+GL    +      +++ M 
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R   +N   ++++I    KEG+  ++ KL+  M+  G KP+ + Y+ LIDG C  GK D
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA ++L  M++ G   +  TY +L+ G+    +   A+ ++K+M  +    N + Y++++
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GL    +   A+ ++  +   G + ++  Y+ ++HGLC     +EAL++F   LCL   
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN-LCLT-D 651

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            Q +  T+NI++ AL K   +  + DL  +    G  PD+ T ++    L E+
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQ 704



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 140/554 (25%), Positives = 239/554 (43%), Gaps = 93/554 (16%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  YN +  A    + P   T+ ++I   CR G +D        +  +    D  T+  
Sbjct: 73  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTP 132

Query: 233 LMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLC------------------ 273
           L+ GLC + R  +A+ ++L  M   GC P   ++N L+ GLC                  
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 274 --------------------KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                               K G+  +A      M  +G LP+ VTY+++I  LC    +
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAM 252

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           DKA+ +L+ MV +  MP+ +TY +I++G    G+  +    L  M       N   YS+L
Sbjct: 253 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSL 312

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ++ L K G++ +A K++  M ++G +P+   Y  L+ G    G   E   +L  M+ NG 
Sbjct: 313 MNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGI 372

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +   ++ L+  + +  K  +A+ ++  M ++    N VCY  +I  LC+ G + +A +
Sbjct: 373 QPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAML 432

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML------------------C 535
            + QM+  G  P+++ Y+S+IHGLC     ++A +L  EML                  C
Sbjct: 433 YFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHC 492

Query: 536 LEPK---------------SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            E +                +PD+ TYN L++  C    +  +  LL SM+  G  PD+V
Sbjct: 493 KEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIV 552

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
           T    +     ++    D        A+ LFK   +SG            +SP   T+  
Sbjct: 553 TYGTLINGYC-RVSRMDD--------ALALFKEMVSSG------------VSPNIITYNI 591

Query: 641 VVQELCRPKRIQAA 654
           ++Q L   +R  AA
Sbjct: 592 ILQGLFHTRRTAAA 605



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 234/483 (48%), Gaps = 14/483 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ S++  Y +SG  K     L +MR    E  VV   S +      G++    EA ++F
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRS---TEARKIF 329

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIK 200
            +M      KR ++   +    ++Q      AL   + +++    N I P+   FN++I 
Sbjct: 330 DSMT-----KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              +   VD A+ +F +M      P++  Y T++D LCK   +D+A+L  ++M  +G  P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             + +  LI+GLC   +  +A +L+  M  +G   N + +N++I   C +G + ++  L 
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D MV     P+ +TY T+I+G    G+  +  ++L SM       +   Y TLI+G  + 
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 564

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            + +DA+ L+K+M+  G  PN + Y+ ++ GL    +   A+E+   +  +G      TY
Sbjct: 565 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 624

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  ++    +A+ +++++   +       ++++I  L + G++ EA+ ++    +
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  PDV  YS M   L   GS+EE   LF  M   E     D    N ++  L ++ +I
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM--EENGCSADSRMLNSIVRKLLQRGDI 742

Query: 561 SHS 563
           + +
Sbjct: 743 TRA 745



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 125/308 (40%), Gaps = 48/308 (15%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  I  ++ K   V E+ +LF  MV     K  + ++N++++     G    A +    +
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMV-RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL--- 237
           V+   + + P+ +T+  +I   CR+  +D+A+ LF+EM      P+I TY  ++ GL   
Sbjct: 543 VS---VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599

Query: 238 --------------------------------CKENRLDEAVLLLDEMQVDGCFPTPVTF 265
                                           CK N  DEA+ +   + +        TF
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N++I  L K G +  A  L       G +P+  TY+ +   L  +G+L++   L   M  
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           + C  +     +I+  L++ G        L  ++E+ F +     S L+         E 
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL---------ES 770

Query: 386 AMKLWKQM 393
           +  +W+Q+
Sbjct: 771 SPIVWEQI 778


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  254 bits (650), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 263/476 (55%), Gaps = 16/476 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + K     H + EA RLF +M  +  C+    ++ +++  + Q G  + AL+ +  
Sbjct: 228 TYSTLIKGLCMKHRISEATRLFMSM-QKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQE 286

Query: 180 IVNAKH---MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           ++N      +   P  ++++++I  +C+    D A +LF+EM  +   PD+ +Y TL+ G
Sbjct: 287 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHG 346

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C   + ++A  L +EM   G  P   T +VLI+ LCK G++  A KL++ +  +GC+P+
Sbjct: 347 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPD 406

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR---AVDGAR 353
            VT  TL+ GLC+K  + KA  L  +M    CMPN VT  T++ GL + G    A++  +
Sbjct: 407 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 466

Query: 354 VLMSMEERKFHVN----EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
            ++S +   + +N       YS +I GL K G+ ++A +L+K+M   G  P+ + Y++LI
Sbjct: 467 NMLS-DTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 525

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            G CR GK  +A+ +  EM++ G   +  T+S L+    + GK  +A E+ + M +  C+
Sbjct: 526 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 585

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N V Y+ L+ GLC + ++ EA  ++ +M   GC PDVV Y +++ GLC  G+++ AL+L
Sbjct: 586 PNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 645

Query: 530 FNEMLCLEPKS----QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
             +ML    +     +PDV +Y+I+++ LCK      + +L   M   G  P++++
Sbjct: 646 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVIS 701



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 166/548 (30%), Positives = 278/548 (50%), Gaps = 39/548 (7%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  I     K    +EA  LF  M  +      + S+ S+++   + G + +A   +N 
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVI-SYTSLIHGFCRSGKWEKAKCLFNE 181

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++   + I  +  T +++I  +C+ G V  A +L   M  R C  DI TY TL+ GLC 
Sbjct: 182 MLD---VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM------FLKGC 293
           ++R+ EA  L   MQ  GC P  + +  L+ GLC+ G +  A +L   M      +   C
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            P  ++Y+ +I GLC     D+A  L   M A   MP+ ++Y T+I+G    G+      
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   M +     +    S LI  L K+GK  +A KL + ++++GC P+ V  + L+ GLC
Sbjct: 359 LFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLC 418

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN------N 467
              +  +A ++  +M   GC  N  T ++LMKG  +SG    A+E+ K+M  +      N
Sbjct: 419 MKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGIN 478

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  N + YS++I GLC+ G+  EAR ++ +M + G  PDV++Y+S+IHG C +G  ++A 
Sbjct: 479 CKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAK 538

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            LFNEM+  +   QPDV T+++L++ LCK+  +  + +LL  M+ RGC P+ VT    + 
Sbjct: 539 YLFNEMV--DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVK 596

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            L           D ++E A +LF + +  G              P   T+  +++ LC+
Sbjct: 597 GLCM--------NDRISE-ATQLFMKMQKLGCL------------PDVVTYGTLMKGLCQ 635

Query: 648 PKRIQAAI 655
              I+ A+
Sbjct: 636 TGNIKTAL 643



 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 144/417 (34%), Positives = 225/417 (53%), Gaps = 14/417 (3%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
           H+ I P+  T  ++I   C+ G V  A +L   M  R C  DI TY TL+ GLC ++R+ 
Sbjct: 3   HVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRIS 62

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM------FLKGCLPNEV 298
           EA  L   M+  GC P  + +  L+ GLC+ G++  A  L   M      +   C P  V
Sbjct: 63  EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLV 122

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           +Y+ +I GLC     D+A  L   M A   MP+ ++Y ++I+G  + G+      +   M
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +     +    S LI  L KEGK  +A +L + M+++GC  + V YS LI GLC   + 
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC---- 474
            EA  +   M   GC  +A  Y +LMKG  ++G  + A+++ ++M  +   Y   C    
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302

Query: 475 --YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             YS++I GLC+D +  EAR ++ +M ++G  PDV++Y+++IHG C +G  E+A  LFNE
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           M  L+   QPDV T ++L++ LCK+  +  +  LL  ++ RGC PD+VTC   +  L
Sbjct: 363 M--LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGL 417



 Score =  245 bits (626), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 145/457 (31%), Positives = 245/457 (53%), Gaps = 18/457 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  I     K    +EA  LF  M  +      V S+ ++++     G + +A   +N 
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQ-GIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++   + I P+  T +++I  +C+ G V  A +L   +  R C PD+ T  TL+ GLC 
Sbjct: 363 MLD---VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCM 419

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK------GC 293
           ++R+ +A  L  +MQ  GC P  VT   L+ GLC++G +  A +L  NM          C
Sbjct: 420 KHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            PN ++Y+ +I GLC  G  D+A  L   M A   +P+ ++Y ++I+G  + G+  D   
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   M +     +   +S LI  L KEGK  +A +L + M+++GC PNTV Y+ L+ GLC
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLC 599

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE- 472
              +  EA ++  +M   GC  +  TY +LMKG  ++G    A+E+ K M  +   Y   
Sbjct: 600 MNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTN 659

Query: 473 -----VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
                + YS++I GLC+ G+  EAR ++ +M + G  P+V++Y+S+IHG C +G +E+A 
Sbjct: 660 FKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAK 719

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            LFNEM  ++   Q +  TY+++++  CK+  I  ++
Sbjct: 720 HLFNEM--VDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 163/535 (30%), Positives = 262/535 (48%), Gaps = 43/535 (8%)

Query: 137 AIRLFHTMVDE-----FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           A+ L   M+++       CK T+ S++ +++ + ++     A E +  +   K   ++P+
Sbjct: 99  ALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDRREDEARELFKEM---KAQGMMPD 155

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +++  +I   CR G  + A  LF EM       D+ T   L+D LCKE ++ EA  LL+
Sbjct: 156 VISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLE 215

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            M   GC    VT++ LI GLC    +  A +L  +M   GC P+ + Y TL+ GLC  G
Sbjct: 216 VMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTG 275

Query: 312 NLDKAVSLLDRMV------ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           N++ A+ L   M+        KC P  ++Y  II+GL K  R  +   +   M+ +    
Sbjct: 276 NINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMP 335

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   Y+TLI G    GK E A  L+ +M++ G +P+    S LID LC+ GK  EA ++L
Sbjct: 336 DVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 395

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             +I  GC  +  T ++L+KG     +  KA +++  M K  C+ N V  + L+ GLC+ 
Sbjct: 396 EVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQS 455

Query: 486 GKLREARMVWTQMLSR------GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           G ++ A  +   MLS        CKP+ ++YS +I GLC  G  +EA +LF EM  L   
Sbjct: 456 GNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKAL--G 513

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             PDV +Y  L++  C+      +  L N M+D G  PD+ T ++ +  L          
Sbjct: 514 VIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML---------- 563

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                       K  +     +++EVM+Q+   P T T+  +V+ LC   RI  A
Sbjct: 564 -----------CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 607



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 243/480 (50%), Gaps = 36/480 (7%)

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEG----------------LYHRALEFYNHIVNAKHMN 187
           ++D F  +  V   N +L V++Q G                + HR  E     ++ K + 
Sbjct: 16  LIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 75

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN------CEPDIYTYCTLMDGLCKEN 241
             P+ + +  ++K +C+ G ++ A+ L +EM          C+P + +Y  ++DGLCK+ 
Sbjct: 76  CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDR 135

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           R DEA  L  EM+  G  P  +++  LI+G C++G+  +A  L + M   G   +  T +
Sbjct: 136 REDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSS 195

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI  LC +G + +A  LL+ M+   C+ + VTY T+I GL    R  +  R+ MSM++ 
Sbjct: 196 MLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKL 255

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG------CKPNTVVYSALIDGLCRV 415
               +   Y TL+ GL + G    A++L ++M+         CKP  + YS +IDGLC+ 
Sbjct: 256 GCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 315

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            + DEA E+  EM   G   +  +Y++L+ GF  SGK  KA  ++ +M       +    
Sbjct: 316 RREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTS 375

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           SVLI  LC+ GK+ EA  +   ++ RGC PDVV  ++++ GLC    + +A +LF +M  
Sbjct: 376 SVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK 435

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR------GCDPDLVTCNIFLTAL 589
           L     P+V T   L+  LC+  NI  +++L  +M+         C P+ ++ +I +  L
Sbjct: 436 L--GCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGL 493



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 220/422 (52%), Gaps = 24/422 (5%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P   T  VLI+  CK G++  A +L++ M  +GC+ + VTY+TLI GLC+K  + +A
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEA 64

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM--EERKFHV----NEYIY 370
             L   M    C P+ + YGT++ GL + G+      +   M  +  ++ +        Y
Sbjct: 65  TQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSY 124

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S +I GL K+ + ++A +L+K+M  +G  P+ + Y++LI G CR GK ++A+ +  EM++
Sbjct: 125 SIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLD 184

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G  ++  T S L+    + GK  +A E+ + M +  C+ + V YS LI GLC   ++ E
Sbjct: 185 VGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISE 244

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC----LEPKSQPDVFT 546
           A  ++  M   GC+PD +AY +++ GLC  G++  AL+L  EML        K +P + +
Sbjct: 245 ATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLIS 304

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLN 604
           Y+I+++ LCK      + +L   M  +G  PD+++    +    L  K E  +   + + 
Sbjct: 305 YSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEML 364

Query: 605 ELAIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           ++ I+            L K+ +     K++EV++Q+   P   T   +V+ LC   RI 
Sbjct: 365 DVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRIS 424

Query: 653 AA 654
            A
Sbjct: 425 KA 426



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 137/305 (44%), Gaps = 64/305 (20%)

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+  G +P+      LID  C+ GK  EA E+L  M+  GC  +  TYS+L+KG     +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR----------------------- 489
             +A +++  M K  C  + + Y  L+ GLC+ GK+                        
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 490 ------------------EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
                             EAR ++ +M ++G  PDV++Y+S+IHG C +G  E+A  LFN
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           EML +  +S  DV T ++L++ LCK+  +  + +LL  M+ RGC  D+VT +  +  L  
Sbjct: 181 EMLDVGIRS--DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           K    +         A RLF   +  G              P    +  +++ LC+   I
Sbjct: 239 KHRISE---------ATRLFMSMQKLG------------CRPDAIAYGTLMKGLCQTGNI 277

Query: 652 QAAIN 656
             A+ 
Sbjct: 278 NTALQ 282


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 160/525 (30%), Positives = 264/525 (50%), Gaps = 7/525 (1%)

Query: 82  GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           G   F  L   +   G  +       RMR  + +   +S  F+     K+   +   + F
Sbjct: 159 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 218

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           + M+       +V ++N +++ + +EG    +   +   V  + M + P+ +T+N +I  
Sbjct: 219 NDMIGA-GIAPSVFTYNVMIDYLCKEGDLENSRRLF---VQMREMGLSPDVVTYNSLIDG 274

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             ++G ++    LF EM    C PDI TY  L++  CK  ++  A     EM+ +G  P 
Sbjct: 275 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 334

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT++ LI+  CK G +  A KL+ +M   G LPNE TY +LI   C  GNL +A  LL+
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M+ +    N VTY  +++GL K GR ++   V  SM +     N+ +Y+ L+ G  K  
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + EDAMK+ KQM E   KP+ ++Y ++I G C   K +E + IL EM + G +AN    +
Sbjct: 455 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 514

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +++  +F++GK   A+  +++M         V Y VLI GLCE G +  A   + +MLS 
Sbjct: 515 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSL 574

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G +P+V  Y+S+I GLC    +E A KLF+EM C      PD+  +  L++   K  N+ 
Sbjct: 575 GLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQC--RGMTPDITAFTALIDGNLKHGNLQ 632

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            ++ L++ M +   + DL      ++   +  E  Q    F NE+
Sbjct: 633 EALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ-ARKFFNEM 676



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 257/546 (47%), Gaps = 29/546 (5%)

Query: 29  TIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNS-TPKLGSYQLGDSTFY 87
           T+P  RS  F   R + S N Q+           + F+D I     P + +Y +      
Sbjct: 191 TLPKARSCNFLLHRLSKSGNGQL---------VRKFFNDMIGAGIAPSVFTYNV------ 235

Query: 88  SLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            +I +    GD ++   +  +MR       VV   S I     YGK   +EE   LF+ M
Sbjct: 236 -MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI---DGYGKVGSLEEVASLFNEM 291

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   C   + ++N ++N   +     RA E+++ +   K+  + PN +T++ +I   C+
Sbjct: 292 KD-VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM---KNNGLKPNVVTYSTLIDAFCK 347

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G++  AI+L  +M      P+ +TY +L+D  CK   L EA  LL++M   G     VT
Sbjct: 348 EGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L++GLCK G +  A ++  +M   G  PN+  Y  L+HG      ++ A+ +L +M 
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ + YG+II G     +  +   +L  M+ R    N  I +T+I   FK GK+ 
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA+  +++M + G +   V Y  LIDGLC  G  + A +    M++ G   N   Y+SL+
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G   +     A +++ +M       +   ++ LI G  + G L+EA ++ ++M     +
Sbjct: 588 DGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 647

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D+  Y+S++ G    G + +A K FNEM  +E    P+      LL    K+  +  +I
Sbjct: 648 FDLHVYTSLVSGFSQCGELHQARKFFNEM--IEKGILPEEVLCICLLREYYKRGQLDEAI 705

Query: 565 DLLNSM 570
           +L N M
Sbjct: 706 ELKNEM 711



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 153/323 (47%), Gaps = 2/323 (0%)

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C      F+VL +   + G L  A +    M     LP   + N L+H L   GN     
Sbjct: 156 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 215

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
              + M+ +   P+  TY  +I+ L K G   +  R+ + M E     +   Y++LI G 
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K G  E+   L+ +M + GC P+ + Y+ LI+  C+  K   A E   EM NNG   N 
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 335

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TYS+L+  F + G    A+++  DM +   + NE  Y+ LI   C+ G L EA  +   
Sbjct: 336 VTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 395

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           ML  G K ++V Y++++ GLC AG + EA ++F  M  L+    P+   Y  L++   K 
Sbjct: 396 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM--LKDGISPNQQVYTALVHGYIKA 453

Query: 558 SNISHSIDLLNSMMDRGCDPDLV 580
             +  ++ +L  M +    PDL+
Sbjct: 454 ERMEDAMKILKQMTECNIKPDLI 476



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 180/381 (47%), Gaps = 4/381 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +   G  +    +L  MRR   +  E ++  +  A  KA  + EA +L + M
Sbjct: 337 TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 396

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +   K  + ++ ++L+ + + G    A E +  ++      I PN   +  ++    +
Sbjct: 397 L-QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKD---GISPNQQVYTALVHGYIK 452

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +++A+++ ++M   N +PD+  Y +++ G C + +L+E  L+L+EM+  G    PV 
Sbjct: 453 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI 512

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
              +I+   K G+   A      M   G     VTY  LI GLC  G ++ AV    RM+
Sbjct: 513 STTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRML 572

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    PN   Y ++I+GL          ++   M+ R    +   ++ LI G  K G  +
Sbjct: 573 SLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQ 632

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ L  +M E   + +  VY++L+ G  + G+  +A +   EMI  G          L+
Sbjct: 633 EALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLL 692

Query: 445 KGFFESGKGHKAVEIWKDMAK 465
           + +++ G+  +A+E+  +M +
Sbjct: 693 REYYKRGQLDEAIELKNEMER 713



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 26/234 (11%)

Query: 425 LFEMI---NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           +F+M+    N C + +  +  L   F E G   +A E +  M     +      + L+H 
Sbjct: 145 IFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 204

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           L + G  +  R  +  M+  G  P V  Y+ MI  LC  G +E + +LF +M   E    
Sbjct: 205 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR--EMGLS 262

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PDV TYN L++   K  ++     L N M D GC PD++T N  +    +  + P+    
Sbjct: 263 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR---- 318

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                A   F   + +G            L P   T+  ++   C+   +Q AI
Sbjct: 319 -----AFEYFSEMKNNG------------LKPNVVTYSTLIDAFCKEGMMQGAI 355


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 157/508 (30%), Positives = 263/508 (51%), Gaps = 8/508 (1%)

Query: 85  TFYSLIQHY-ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           TF  L++   A+     ++++VL RM     +    S+  + K     +  +EA+ L H 
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 144 MVDE--FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           M D+        V S+N+VLN   +EG   +A   Y+ +++     ILP+ +T++ +I  
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDR---GILPDVVTYSSIIAA 245

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+   +D A+++   M      PD  TY +++ G C   +  EA+  L +M+ DG  P 
Sbjct: 246 LCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPN 305

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT++ L+N LCKNG    A K+ D+M  +G  P+  TY TL+ G   KG L +  +LLD
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 365

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            MV +   P+   +  +I    K  +      V   M +   + N   Y T+I  L K G
Sbjct: 366 LMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 425

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             +DAM  ++QM+++G  PN +VY++LI GLC   K D+AEE++ EM++ G   N   ++
Sbjct: 426 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFN 485

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           S++    + G+  ++ +++  M +     + + Y+ LI G C  GK+ EA  +   M+S 
Sbjct: 486 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSV 545

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G KPD+V Y ++I+G C    +++AL LF EM  +     P++ TYNI+L  L      +
Sbjct: 546 GVKPDIVTYGTLINGYCRVSRMDDALALFKEM--VSSGVSPNIITYNIILQGLFHTRRTA 603

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            + +L  S+   G   +L T NI L  L
Sbjct: 604 AAKELYVSITKSGTQLELSTYNIILHGL 631



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/547 (26%), Positives = 261/547 (47%), Gaps = 27/547 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + K         +A+ +    + E  C   V S+N++L  +  E     ALE  + 
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + + +     P+ +++N V+    + G  D A   + EM  R   PD+ TY +++  LCK
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCK 248

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              +D+A+ +L+ M  +G  P  +T+N +++G C +G+   A   +  M   G  PN VT
Sbjct: 249 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVT 308

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y++L++ LC  G   +A  + D M      P+  TY T++ G    G  V+   +L  M 
Sbjct: 309 YSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMV 368

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 + ++++ LI    K+ K + AM ++ +M + G  PN V Y  +ID LC+ G  D
Sbjct: 369 RNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVD 428

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A     +MI+ G   N   Y+SL+ G     K  KA E+  +M       N + ++ +I
Sbjct: 429 DAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSII 488

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
              C++G++ E+  ++  M+  G KPD++ Y+++I G C AG ++EA KL   M+ +  K
Sbjct: 489 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVK 548

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             PD+ TY  L+N  C+ S +  ++ L   M+  G  P+++T NI L             
Sbjct: 549 --PDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG----------- 595

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI---- 655
                     LF  +RT+   ++   + +     + ST+  ++  LC+      A+    
Sbjct: 596 ----------LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 645

Query: 656 NKCWSNL 662
           N C ++L
Sbjct: 646 NLCLTDL 652



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 142/532 (26%), Positives = 260/532 (48%), Gaps = 20/532 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I  A  KA  +++A+ + +TMV          ++NS+L+     G    A+     
Sbjct: 238 TYSSIIAALCKAQAMDKAMEVLNTMVKN-GVMPDCMTYNSILHGYCSSGQPKEAI---GT 293

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   +   + PN +T++ ++  +C+ G    A ++F  M  R  EPDI TY TL+ G   
Sbjct: 294 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYAT 353

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +  L E   LLD M  +G  P    FN+LI    K  ++ +A  +   M   G  PN V 
Sbjct: 354 KGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVC 413

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y T+I  LC  G++D A+   ++M+     PN + Y ++I+GL    +      +++ M 
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEML 473

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R   +N   ++++I    KEG+  ++ KL+  M+  G KP+ + Y+ LIDG C  GK D
Sbjct: 474 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMD 533

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA ++L  M++ G   +  TY +L+ G+    +   A+ ++K+M  +    N + Y++++
Sbjct: 534 EATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 593

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GL    +   A+ ++  +   G + ++  Y+ ++HGLC     +EAL++F   LCL   
Sbjct: 594 QGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN-LCL-TD 651

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK------- 592
            Q +  T+NI++ AL K   +  + DL  +    G  PD+ T ++    L E+       
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 711

Query: 593 ---LEAPQDG----TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
              L   ++G    +  LN +  +L +R   +     + ++ +K  S + ST
Sbjct: 712 DLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEAST 763



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 234/483 (48%), Gaps = 14/483 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ S++  Y +SG  K     L +MR    E  VV   S +      G++    EA ++F
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRS---TEARKIF 329

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIK 200
            +M      KR ++   +    ++Q      AL   + +++    N I P+   FN++I 
Sbjct: 330 DSMT-----KRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILIC 384

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              +   VD A+ +F +M      P++  Y T++D LCK   +D+A+L  ++M  +G  P
Sbjct: 385 AYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTP 444

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             + +  LI+GLC   +  +A +L+  M  +G   N + +N++I   C +G + ++  L 
Sbjct: 445 NIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLF 504

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D MV     P+ +TY T+I+G    G+  +  ++L SM       +   Y TLI+G  + 
Sbjct: 505 DLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRV 564

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            + +DA+ L+K+M+  G  PN + Y+ ++ GL    +   A+E+   +  +G      TY
Sbjct: 565 SRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTY 624

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  ++    +A+ +++++   +       ++++I  L + G++ EA+ ++    +
Sbjct: 625 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSA 684

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  PDV  YS M   L   GS+EE   LF  M   E     D    N ++  L ++ +I
Sbjct: 685 NGLVPDVRTYSLMAENLIEQGSLEELDDLFLSM--EENGCSADSRMLNSIVRKLLQRGDI 742

Query: 561 SHS 563
           + +
Sbjct: 743 TRA 745



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 125/308 (40%), Gaps = 48/308 (15%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  I  ++ K   V E+ +LF  MV     K  + ++N++++     G    A +    +
Sbjct: 484 FNSIIDSHCKEGRVIESEKLFDLMV-RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL--- 237
           V+   + + P+ +T+  +I   CR+  +D+A+ LF+EM      P+I TY  ++ GL   
Sbjct: 543 VS---VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 599

Query: 238 --------------------------------CKENRLDEAVLLLDEMQVDGCFPTPVTF 265
                                           CK N  DEA+ +   + +        TF
Sbjct: 600 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 659

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N++I  L K G +  A  L       G +P+  TY+ +   L  +G+L++   L   M  
Sbjct: 660 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 719

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           + C  +     +I+  L++ G        L  ++E+ F +     S L+         E 
Sbjct: 720 NGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL---------ES 770

Query: 386 AMKLWKQM 393
           +  +W+Q+
Sbjct: 771 SPIVWEQI 778


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  254 bits (649), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/478 (32%), Positives = 254/478 (53%), Gaps = 31/478 (6%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N +T+  +I   CR G + +A+ L   MPV    PD YTY T++ GLC   + ++A  L+
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMPV---APDTYTYNTVLMGLCGARQWEDAEALM 235

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM  + C P  VTF   I   C+NG L RA +L+D M   GC P+ V Y+TL++G   +
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D A+ LL+ M+   C PN + Y   + GL    R  D  ++++ M  +    NE  +
Sbjct: 296 GRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S L S L + G  + AM++ +QM + GC+P+ V+Y+ LI      G+ D+A ++L  M  
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM-- 410

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
             C+ +  ++++ +KG   + +   A E+   M + +C   E+ +++LI  LC++G++  
Sbjct: 411 -PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNN 469

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  V+ QM   GC PD+V YSS+I+GL   G VE A++LF  M C     +PD+F YN +
Sbjct: 470 AIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPC-----KPDIFGYNAV 524

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK----------LEAPQDGT 600
           L  LC+ +    + +L+++M  + C P+ +T NI + +L +K           + P+ G+
Sbjct: 525 LKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGS 584

Query: 601 D---FLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               F     I  F  Q R     +++  M  K   P   ++   ++ LCR +R + A
Sbjct: 585 TPDIFTYNALINGFSEQGRLDDARRLLSTMSCK---PDAVSYNSALKGLCRAERWKEA 639



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 219/423 (51%), Gaps = 11/423 (2%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y R+    + +     M + P+T T+N V+  +C     ++A  L  EM   +C P+  T
Sbjct: 190 YCRSGRLADALALIASMPVAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVT 249

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           + T +   C+   LD AV LLD M   GC P  V ++ L+NG  + G +  A +L++ M 
Sbjct: 250 FATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGML 309

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
              C PN + YN  + GLC+    +    L+  MV   C+PNE T+  + + L + G   
Sbjct: 310 ---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVD 366

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               VL  M +     +  IY+TLI    ++G+ +DA+KL   M    C P+ + ++A +
Sbjct: 367 CAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAAL 423

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLCR  + D+AEE++ +M+   C     T++ L+    ++G+ + A+E+++ M K  C 
Sbjct: 424 KGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCT 483

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + V YS LI+GL E G +  A  ++  M    CKPD+  Y++++ GLC A   E+A +L
Sbjct: 484 PDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGEL 540

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            + M        P+  T+NIL+N+LC++  +  +I++   M   G  PD+ T N  +   
Sbjct: 541 ISNM--ARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGF 598

Query: 590 KEK 592
            E+
Sbjct: 599 SEQ 601



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 139/499 (27%), Positives = 248/499 (49%), Gaps = 25/499 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ +LI  Y  SG       ++  M      V   ++ +  +      A   E+A  L  
Sbjct: 182 TYTTLINGYCRSGRLADALALIASM-----PVAPDTYTYNTVLMGLCGARQWEDAEALMA 236

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV   HC     +F + +    Q GL  RA++  + +         P+ + ++ ++   
Sbjct: 237 EMVRN-HCPPNEVTFATQIRAFCQNGLLDRAVQLLDRM---PQYGCTPDVVIYSTLVNGF 292

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
              G VD+AI+L   M    C+P+   Y   + GLC   R ++   L+ EM    C P  
Sbjct: 293 SEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNE 349

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TF++L + LC+NG +  A ++++ M   GC P+ V YNTLI+    +G +D A+ LL+ 
Sbjct: 350 ATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNS 409

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C P+ +++   + GL +  R  D   +++ M      + E  ++ LI  L + G+
Sbjct: 410 M---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGR 466

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             +A+++++QM + GC P+ V YS+LI+GL   G  + A E+   M    C  + F Y++
Sbjct: 467 VNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNA 523

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++KG   + +   A E+  +MA+ +C  NE+ +++LI+ LC+ G +  A  V+ QM   G
Sbjct: 524 VLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYG 583

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             PD+  Y+++I+G    G +++A +L + M C     +PD  +YN  L  LC+      
Sbjct: 584 STPDIFTYNALINGFSEQGRLDDARRLLSTMSC-----KPDAVSYNSALKGLCRAERWKE 638

Query: 563 SIDLLNSMMDRGCDPDLVT 581
           + +++  M+   C P+ VT
Sbjct: 639 AEEVVAEMLRMKCPPNEVT 657



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 239/463 (51%), Gaps = 18/463 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +++     +  ++  E ++  M R      E +F    +A+ +  L++ A++L   M
Sbjct: 214 TYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRM 273

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             ++ C   V  +++++N   ++G    A+E  N ++        PNT+ +N  +K +C 
Sbjct: 274 -PQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGML------CKPNTICYNAALKGLCI 326

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               ++  QL  EM  ++C P+  T+  L   LC+   +D A+ +L++M   GC P  V 
Sbjct: 327 AQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVI 386

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI    + G +  A KL+++M    C P+ +++N  + GLC     D A  L+ +M+
Sbjct: 387 YNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAERWDDAEELIVQML 443

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C   E+T+  +I+ L + GR  +   V   M +     +   YS+LI+GL ++G  E
Sbjct: 444 REDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVE 503

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A++L++ M    CKP+   Y+A++ GLCR  + ++A E++  M    C  N  T++ L+
Sbjct: 504 SAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILI 560

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
               + G   +A+E+++ M K     +   Y+ LI+G  E G+L +AR + + M    CK
Sbjct: 561 NSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SCK 617

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           PD V+Y+S + GLC A   +EA ++  EML +  K  P+  T+
Sbjct: 618 PDAVSYNSALKGLCRAERWKEAEEVVAEMLRM--KCPPNEVTF 658



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 175/353 (49%), Gaps = 13/353 (3%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
           ++ +  ++  M R+  +  E +F  +     +  LV+ A+ +   M  ++ C+     +N
Sbjct: 330 WEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQM-HKYGCRPDAVIYN 388

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           +++    ++G    AL+  N       M   P+ ++FN  +K +CR    D+A +L  +M
Sbjct: 389 TLIYSFSEQGRVDDALKLLNS------MPCSPDVISFNAALKGLCRAERWDDAEELIVQM 442

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
              +C     T+  L+D LC+  R++ A+ + ++M   GC P  VT++ LINGL + G +
Sbjct: 443 LREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLV 502

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A +L  +M    C P+   YN ++ GLC     + A  L+  M    C PNE+T+  +
Sbjct: 503 ESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNIL 559

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           IN L + G       V   M +     + + Y+ LI+G  ++G+ +DA +L   M    C
Sbjct: 560 INSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM---SC 616

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           KP+ V Y++ + GLCR  +  EAEE++ EM+   C  N  T+    + F  +G
Sbjct: 617 KPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLFVPNG 669


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 161/562 (28%), Positives = 273/562 (48%), Gaps = 26/562 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  + +++ +    ++A+  F  M  +  CK  + +F  +++ + + G+  +A E ++ 
Sbjct: 156 SFNILIRSFARTRRADDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAGMDEKAFEVFHE 214

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++      + P+      +++T+ +   V  A ++F +M      PD   Y T++DGL K
Sbjct: 215 MMAMGF--VPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAK 272

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
                EA+ +LD M    C PT VT+ +L+N LCK G L RA +L   M   G  PN V 
Sbjct: 273 AGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVI 332

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y +LIHG    G + +A SL D MV +   P+ +T+  +I+GL K G     A+    M 
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 N   Y+T+I GL K G+  +A ++ K M+  GC P++V Y  L+DG C++G+ D
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE--IWKDMAKNNCVYNEVCYSV 477
           EA ++L E+     + N   YSSL+ G  + G   K ++    +  A    +   +C S+
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSI 512

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA--GSVEEALKLFNEMLC 535
           ++ GLC+ G+L EA  ++ +M+S GCKPD   Y+ +I+GLC +    VE A  L +++  
Sbjct: 513 IV-GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL-- 569

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
            +    PD  TY  L   LCK   +  ++ +L     RG + D+V      T L  + + 
Sbjct: 570 EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629

Query: 596 PQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
            +       E+  +               L K ++     K  + M+ K   P  +T+  
Sbjct: 630 DR-AVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTA 688

Query: 641 VVQELCRPKRIQAAINKCWSNL 662
           +VQ LC    +  A ++  S L
Sbjct: 689 LVQALCHAGNVDEAFHRFESML 710



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 247/483 (51%), Gaps = 44/483 (9%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  V+EA  +F  M ++        ++N++++ + + G    AL+  ++++       +
Sbjct: 237 KAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA---CV 292

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +T+ +++ ++C+ G ++ A +LFR M      P+   Y +L+ G  K  R+ EA  L
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            DEM   G  P  +T  V+I+GLCK+G   +AAK  + M   GC PN VTY T+I GL  
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +  A  ++  M+A  C P+ VTY  +++G  KLGR  + A++L  +++     N  +
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL 472

Query: 370 YSTLISGLF------------------------------------KEGKAEDAMKLWKQM 393
           YS+L++GL                                     K G+ ++A +++++M
Sbjct: 473 YSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532

Query: 394 MEKGCKPNTVVYSALIDGLCRV--GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           + +GCKP+   Y+ LI+GLCR    + + A  +L ++   G   +A TY+ L  G  + G
Sbjct: 533 VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIG 592

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +  +AV++ ++ +      + V Y+ L  GLC  G++  A  ++ +M+ +G  PD  AY 
Sbjct: 593 EVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYC 652

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +I+GL     +E+A K F+EM+      +P V TY  L+ ALC   N+  +     SM+
Sbjct: 653 CIINGLIKVKKLEDACKFFDEMI--GKGQKPTVATYTALVQALCHAGNVDEAFHRFESML 710

Query: 572 DRG 574
            RG
Sbjct: 711 ARG 713



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/475 (27%), Positives = 229/475 (48%), Gaps = 45/475 (9%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +   + K+  ++EA  LF  MV+  + +  V +   +++ + + G + +A + +  +
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGY-RPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           +        PN +T+  +I+ + ++G V NA ++ + M    C PD  TY  L+DG CK 
Sbjct: 392 MRG---GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC--------------------------- 273
            RLDEA  LLDE+      P    ++ L+NGLC                           
Sbjct: 449 GRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGL 508

Query: 274 ---------KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL--KGNLDKAVSLLDR 322
                    K G L  A ++   M  +GC P+  TYN LI+GLC   +  +++A +LL  
Sbjct: 509 CCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           +     +P+ VTY  +  GL K+G      ++L     R ++ +   Y+ L +GL  +G+
Sbjct: 569 LEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A+ L+++M+ +G  P+   Y  +I+GL +V K ++A +   EMI  G      TY++
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTA 688

Query: 443 LMKGFFESGKGHKAVEIWKDM-AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           L++    +G   +A   ++ M A+   V + + Y  LIHG C+  K+  A  ++  M+SR
Sbjct: 689 LVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISR 748

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           G  P  V  +S+  GL  +G  E+A +L  EM      S P   T+  +L+ L K
Sbjct: 749 GNVPTAVTSASLFDGLVRSGKTEKAQELLQEM--AAGGSPPHAATFTAILDGLRK 801



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 222/506 (43%), Gaps = 44/506 (8%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           ++E+F      G ++     + SLI  +A SG  K    +   M          +   + 
Sbjct: 314 AEELFRVMAASG-FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMI 372

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
               K+   E+A + F  M+    CK  V ++ +++  + + G    A      ++    
Sbjct: 373 DGLCKSGNFEQAAKSFEEMM-RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA--- 428

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY--------------- 230
               P+++T+  ++   C+LG +D A QL  E+   +  P++  Y               
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEK 488

Query: 231 ---------------------CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
                                C+++ GLCK  RLDEA  +   M  +GC P   T+N+LI
Sbjct: 489 TLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 270 NGLCKNGE--LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           NGLC++ E  + RA  L+ ++   G LP+ VTY  L  GLC  G +D+AV +L+   +  
Sbjct: 549 NGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
              + V Y  +  GL   G+      +   M  +    +   Y  +I+GL K  K EDA 
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDAC 668

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKG 446
           K + +M+ KG KP    Y+AL+  LC  G  DEA      M+  G    +   Y +L+ G
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHG 728

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           F ++ K   A+++++DM     V   V  + L  GL   GK  +A+ +  +M + G  P 
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPH 788

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNE 532
              +++++ GL  +    + LKL  E
Sbjct: 789 AATFTAILDGLRKSDESGKLLKLVQE 814



 Score = 39.3 bits (90), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 27/135 (20%)

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           Q DVFTYN L+N L  + N S    +   M+  G  P+  + NI + +      A    T
Sbjct: 116 QHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVT 175

Query: 601 DFLNELAIRLFKRQR--------------------TSGGFKIV-EVMLQKFLSPQTSTWE 639
            F       + KR+R                        F++  E+M   F+ P  +   
Sbjct: 176 CF------EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229

Query: 640 RVVQELCRPKRIQAA 654
            +V+ L + KR++ A
Sbjct: 230 AMVRTLLKAKRVKEA 244


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 281/547 (51%), Gaps = 46/547 (8%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           Y+     +Y++++  + +   +  + VL  M + +     ++F ++  +Y +A  +  A+
Sbjct: 130 YRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAM 189

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           R+  TM+ +   +  +   N+ ++V++      +A+ F   +   + + I PN +T+N +
Sbjct: 190 RVL-TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM---QIVEIEPNVITYNCL 245

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG- 257
           IK  C L  +++A++L  EMP + C PD  +Y T+M  LCKE R+ E  LL+++M  D  
Sbjct: 246 IKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSN 305

Query: 258 CFPTPVTFN-----------------------------------VLINGLCKNGELGRAA 282
             P  VT+N                                    +++  C+ G + +A 
Sbjct: 306 LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAK 365

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           ++V+ MF KGC+P+ VTY ++I+GLC +  +D+A  +L +M    C PN V+Y  ++NGL
Sbjct: 366 EIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGL 425

Query: 343 VKLGRAVDGARVLMSMEERKFHV-NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
            K G +++ AR +M+M E  + + N   YS L+ G  +EGK+ +A  L ++M++KG  P 
Sbjct: 426 CKNGNSLE-AREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPT 484

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V  + LI  LC+  K DEA+  + + +NNGCA N   +++++ GF +      A+ +  
Sbjct: 485 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 544

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           DM  +N   + V Y+ +I  L + G++ EA  +  +ML  G  P  V Y ++IH  C  G
Sbjct: 545 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMG 604

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            VE+ LKL  +ML      Q     YN ++  LC   N+  +  LL  ++      D  T
Sbjct: 605 RVEDLLKLLEKML----SRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANT 660

Query: 582 CNIFLTA 588
           C++ + +
Sbjct: 661 CHMLIES 667



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 235/460 (51%), Gaps = 24/460 (5%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            F  V+ +  R G + NA+++   M     EPD+    T +  L   NRLD+AV  L+ M
Sbjct: 171 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 230

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           Q+    P  +T+N LI G C    L  A +L+  M  KGC P++++Y T++  LC +  +
Sbjct: 231 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 290

Query: 314 DKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
            +   L+++M+  S  +P++VTY T ++ L K G   +    L   EER+F V++  YS 
Sbjct: 291 KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 350

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           ++    +EG+ + A ++  +M  KGC P+ V Y+++I+GLC+  K D+A+++L +M  +G
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C  N  +Y++L+ G  ++G   +A E+     ++  + N + YSVL+HG   +GK  EA 
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEAC 470

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M+ +G  P  V  + +I  LC    V+EA +   +  CL      +V  +  +++
Sbjct: 471 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQ--CLNNGCAVNVVNFTTVIH 528

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             C++ ++  ++ LL+ M      PD+VT    + AL                      K
Sbjct: 529 GFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALG---------------------K 567

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           + R     K+   ML+  L P   T+  V+ + CR  R++
Sbjct: 568 KGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVE 607



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/444 (22%), Positives = 183/444 (41%), Gaps = 79/444 (17%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK----SFIFIFKAYGKAHLVEEAIRL 140
           ++Y+++         K + +++ +M ++  ++ ++    +F+ +   +G     +EA+  
Sbjct: 276 SYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHG---DEALE- 331

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F    +E   +     ++++++   +EG   +A E  N + +      +P+ +T+  VI 
Sbjct: 332 FLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK---GCIPDVVTYTSVIN 388

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK--------------------- 239
            +C+   VD A ++ R+M    C+P+  +Y  L++GLCK                     
Sbjct: 389 GLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIP 448

Query: 240 --------------ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
                         E +  EA  L+ EM   G FPTPV  N+LI  LC+  ++  A + +
Sbjct: 449 NAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFM 508

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
           +     GC  N V + T+IHG C K +L+ A+SLLD M  S   P+ VTY TII+ L K 
Sbjct: 509 EQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKK 568

Query: 346 GRAVDGARVLMSMEE------------------RKFHVNEYI---------------YST 372
           GR  +  ++ M M                    R   V + +               Y+ 
Sbjct: 569 GRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQ 628

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +I  L   G  E A KL  +++    K +      LI+     G P  +  +   M N  
Sbjct: 629 VIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRN 688

Query: 433 CAANAFTYSSLMKGFFESGKGHKA 456
              +      + K     GK  +A
Sbjct: 689 LIPDLKLCEKVSKKLMLEGKSEEA 712



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 9/273 (3%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
           F+  GK+    EA  L   M+ +      V+  N ++  + QE     A  F    +N  
Sbjct: 460 FRREGKS---SEACDLVREMIKKGFFPTPVE-INLLIQSLCQEEKVDEAKRFMEQCLNN- 514

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
                 N + F  VI   C+   ++ A+ L  +M + N  PD+ TY T++D L K+ R++
Sbjct: 515 --GCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 572

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L  +M   G  PTPVT+  +I+  C+ G +    KL++ M  +        YN +I
Sbjct: 573 EATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ--ECRTAYNQVI 630

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
             LC  GNL++A  LL +++ +    +  T   +I   +  G  +    V   M  R   
Sbjct: 631 EKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLI 690

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
            +  +   +   L  EGK+E+A KL  + +E+G
Sbjct: 691 PDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 723


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 153/501 (30%), Positives = 254/501 (50%), Gaps = 24/501 (4%)

Query: 136 EAIRLFHTMV------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           E++ L  TMV      D   C + +K F ++ N I +       LE +            
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN-IPKAVRVMEILEKFGQ---------- 155

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+   +N +I   C++  +D+A ++   M  ++  PD  TY  ++  LC   +LD A+ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+++  D C PT +T+ +LI      G +  A KL+D M  +G  P+  TYNT+I G+C 
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G +D+A  ++  +    C P+ ++Y  ++  L+  G+  +G +++  M   K   N   
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS LI+ L ++GK E+AM L K M EKG  P+   Y  LI   CR G+ D A E L  MI
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG-KL 488
           ++GC  +   Y++++    ++GK  +A+EI+  + +  C  N   Y+ +   L   G K+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           R   M+  +M+S G  PD + Y+SMI  LC  G V+EA +L  +M   E    P V TYN
Sbjct: 456 RALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE--FHPSVVTYN 512

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KEKLEAPQDGTDFLNE 605
           I+L   CK   I  +I++L SM+  GC P+  T  + +  +     + EA +   D +  
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572

Query: 606 LAIRLFKRQRTSGGFKIVEVM 626
            AI  +  +R    F ++ V+
Sbjct: 573 DAISEYSFKRLHRTFPLLNVL 593



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 194/396 (48%), Gaps = 17/396 (4%)

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C++G    +  L++ M  KG  P+ +    LI G     N+ KAV +++ ++     P+ 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y  +ING  K+ R  D  RVL  M  + F  +   Y+ +I  L   GK + A+K+  Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           ++   C+P  + Y+ LI+     G  DEA +++ EM++ G   + FTY+++++G  + G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A E+ +++    C  + + Y++L+  L   GK  E   + T+M S  C P+VV YS 
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I  LC  G +EEA+ L    L  E    PD ++Y+ L+ A C++  +  +I+ L +M+ 
Sbjct: 339 LITTLCRDGKIEEAMNLLK--LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDF--LNELAIR--------LFKRQRTSG---- 618
            GC PD+V  N  L  L +  +A Q    F  L E+           +F    +SG    
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              ++  M+   + P   T+  ++  LCR   +  A
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 179/336 (53%), Gaps = 4/336 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA++L   M+     K  + ++N+++  + +EG+  RA E    + N +     P+ +
Sbjct: 244 VDEALKLMDEMLSR-GLKPDMFTYNTIIRGMCKEGMVDRAFEM---VRNLELKGCEPDVI 299

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N++++ +   G  +   +L  +M    C+P++ TY  L+  LC++ +++EA+ LL  M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G  P   +++ LI   C+ G L  A + ++ M   GCLP+ V YNT++  LC  G  
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A+ +  ++    C PN  +Y T+ + L   G  +    +++ M       +E  Y+++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           IS L +EG  ++A +L   M      P+ V Y+ ++ G C+  + ++A  +L  M+ NGC
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
             N  TY+ L++G   +G   +A+E+  D+ + + +
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 147/291 (50%), Gaps = 17/291 (5%)

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           + G   +++ L + M+ KG  P+ ++ + LI G   +    +A  ++ E++      + F
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVF 159

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            Y++L+ GF +  +   A  +   M   +   + V Y+++I  LC  GKL  A  V  Q+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           LS  C+P V+ Y+ +I      G V+EALKL +EML    K  PD+FTYN ++  +CK+ 
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK--PDMFTYNTIIRGMCKEG 277

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK---LEAPQDGTDFLNE---------- 605
            +  + +++ ++  +GC+PD+++ NI L AL  +    E  +  T   +E          
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 606 -LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            L   L +  +      ++++M +K L+P   +++ ++   CR  R+  AI
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 150/508 (29%), Positives = 263/508 (51%), Gaps = 31/508 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ ++ ++    LP+ + F  ++  V R+   D  I L+++M  +    DIY++  
Sbjct: 63  AIDLFSDMLRSRP---LPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  ++L  A+    ++   G  P  VTF  L++GLC    +  A      MF   
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN VT+ TL++GLC +G + +AV+LLDRM+     P ++TYGTI++G+ K G  V   
Sbjct: 180 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSAL 239

Query: 353 RVLMSMEERKFHV-NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +L  MEE    + N  IYS +I  L K+G+  DA  L+ +M EKG  P+   Y+++I G
Sbjct: 240 NLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVG 299

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C  G+  +AE++L EM+    + +  TY++L+  F + GK  +A E++ +M     + N
Sbjct: 300 FCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPN 359

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + YS +I G C+  +L  A  ++  M ++GC P+++ ++++I G C A  +++ ++L +
Sbjct: 360 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLH 419

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
           EM   E     D  TYN L++      +++ ++DLL  M+  G  PD+VTC+  L  L  
Sbjct: 420 EM--TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477

Query: 590 -----------------KEKLEA--PQDGTD----FLNELAIRLFKRQRTSGGFKIVEVM 626
                            K+ L+A  P +G +      N L   L    +     ++ E M
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + + P T T+  ++  LC+  R+  A
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEA 565



 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 153/516 (29%), Positives = 252/516 (48%), Gaps = 42/516 (8%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + SFN ++           AL  +  I     + + P+ +TF  ++  +C    V  A+ 
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITK---LGLHPDVVTFTTLLHGLCVEDRVSEALD 170

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
            F +M    C P++ T+ TLM+GLC+E R+ EAV LLD M  DG  PT +T+  +++G+C
Sbjct: 171 FFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMC 230

Query: 274 KNGELGRAAKLVDNM-FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           K G+   A  L+  M  +   +PN V Y+ +I  LC  G    A +L   M      P+ 
Sbjct: 231 KKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDL 290

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            TY ++I G    GR  D  ++L  M ERK   +   Y+ LI+   KEGK  +A +L+ +
Sbjct: 291 FTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDE 350

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +G  PNT+ YS++IDG C+  + D AE + + M   GC+ N  T+++L+ G+  + +
Sbjct: 351 MLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKR 410

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
               +E+  +M +   V +   Y+ LIHG    G L  A  +  +M+S G  PD+V   +
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKS-------------QPDVFTYNILLNALCKQSN 559
           ++ GLC+ G +++AL++F  M     KS             +PDV TYNIL++ L  +  
Sbjct: 471 LLDGLCDNGKLKDALEMFKVM----QKSKKDLDASHPFNGVEPDVQTYNILISGLINEGK 526

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
              + +L   M  RG  PD +T +  +           DG          L K+ R    
Sbjct: 527 FLEAEELYEEMPHRGIVPDTITYSSMI-----------DG----------LCKQSRLDEA 565

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            ++ + M  K  SP   T+  ++   C+  R+   +
Sbjct: 566 TQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 156/506 (30%), Positives = 247/506 (48%), Gaps = 49/506 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG-------LYHRALE--------FYN 178
           V EA+  FH M  E  C+  V +F +++N + +EG       L  R +E         Y 
Sbjct: 165 VSEALDFFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223

Query: 179 HIVNA------------------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
            IV+                   +  +I+PN + ++ +I ++C+ G   +A  LF EM  
Sbjct: 224 TIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQE 283

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +   PD++TY +++ G C   R  +A  LL EM      P  VT+N LIN   K G+   
Sbjct: 284 KGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFE 343

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A +L D M  +G +PN +TY+++I G C +  LD A  +   M    C PN +T+ T+I+
Sbjct: 344 AEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLID 403

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G     R  DG  +L  M E     +   Y+TLI G +  G    A+ L ++M+  G  P
Sbjct: 404 GYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCP 463

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMIN------------NGCAANAFTYSSLMKGFF 448
           + V    L+DGLC  GK  +A E +F+++             NG   +  TY+ L+ G  
Sbjct: 464 DIVTCDTLLDGLCDNGKLKDALE-MFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLI 522

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             GK  +A E++++M     V + + YS +I GLC+  +L EA  ++  M S+   P+VV
Sbjct: 523 NEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVV 582

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            ++++I+G C AG V++ L+LF EM         +  TY  L+    K  NI+ ++D+  
Sbjct: 583 TFTTLINGYCKAGRVDDGLELFCEM--GRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLE 594
            M+  G  PD +T    LT L  K E
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEE 666



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 208/389 (53%), Gaps = 14/389 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++NS++      G +  A +    ++  K   I P+ +T+N +I    + G    A +L+
Sbjct: 292 TYNSMIVGFCSSGRWSDAEQLLQEMLERK---ISPDVVTYNALINAFVKEGKFFEAEELY 348

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  R   P+  TY +++DG CK+NRLD A  +   M   GC P  +TFN LI+G C  
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +    +L+  M   G + +  TYNTLIHG  L G+L+ A+ LL  M++S   P+ VT 
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNE-----------YIYSTLISGLFKEGKAE 384
            T+++GL   G+  D   +   M++ K  ++              Y+ LISGL  EGK  
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +L+++M  +G  P+T+ YS++IDGLC+  + DEA ++   M +   + N  T+++L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+ ++G+    +E++ +M +   V N + Y  LI G  + G +  A  ++ +M+S G  
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           PD +   +M+ GL +   ++ A+ +  ++
Sbjct: 649 PDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 209/465 (44%), Gaps = 56/465 (12%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +++AI LF +M      P +  +C LM  + +  R D  + L  +M+         +FN+
Sbjct: 60  LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNI 119

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI   C   +L  A      +   G  P+ VT+ TL+HGLC++  + +A+    +M  + 
Sbjct: 120 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETT 179

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C PN VT+ T++N                                   GL +EG+  +A+
Sbjct: 180 CRPNVVTFTTLMN-----------------------------------GLCREGRIVEAV 204

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYSSLMKG 446
            L  +MME G +P  + Y  ++DG+C+ G    A  +L +M   +    N   YS+++  
Sbjct: 205 ALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDS 264

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             + G+   A  ++ +M +     +   Y+ +I G C  G+  +A  +  +ML R   PD
Sbjct: 265 LCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPD 324

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSID 565
           VV Y+++I+     G   EA +L++EML   P+   P+  TY+ +++  CKQ+ +  +  
Sbjct: 325 VVTYNALINAFVKEGKFFEAEELYDEML---PRGIIPNTITYSSMIDGFCKQNRLDAAEH 381

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS-----GGF 620
           +   M  +GC P+L+T N  +       +   DG + L+E+         T+      GF
Sbjct: 382 MFYLMATKGCSPNLITFNTLIDGYCGA-KRIDDGMELLHEMTETGLVADTTTYNTLIHGF 440

Query: 621 KIV----------EVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +V          + M+   L P   T + ++  LC   +++ A+
Sbjct: 441 YLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDAL 485



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 95/173 (54%), Gaps = 3/173 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V+++N +++ +I EG +  A E Y  +    H  I+P+T+T++ +I  +C+   +D A Q
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEM---PHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F  M  ++  P++ T+ TL++G CK  R+D+ + L  EM   G     +T+  LI G  
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFR 627

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           K G +  A  +   M   G  P+ +T   ++ GL  K  L +AV++L+++  S
Sbjct: 628 KVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQMS 680



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/332 (23%), Positives = 144/332 (43%), Gaps = 52/332 (15%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L SG  +    EDA+ L+  M+     P+ V +  L+  + R+ +PD    +  +M    
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              + ++++ L+K F    K   A+  +  + K     + V ++ L+HGLC + ++ EA 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKS---------- 540
             + QM    C+P+VV ++++++GLC  G + EA+ L + M+   L+P            
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 541 ----------------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
                                  P+V  Y+ ++++LCK    S + +L   M ++G  PD
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 579 LVTCNIFLTA-------------LKEKLE---APQDGTDFLNELAIRLFKRQRTSGGFKI 622
           L T N  +               L+E LE   +P   T   N L     K  +     ++
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT--YNALINAFVKEGKFFEAEEL 347

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            + ML + + P T T+  ++   C+  R+ AA
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/214 (19%), Positives = 91/214 (42%), Gaps = 23/214 (10%)

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L  GF E      A++++ DM ++  + + V +  L+  +    +      ++ +M  + 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            + D+ +++ +I   C+   +  AL  F ++  L     PDV T+  LL+ LC +  +S 
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKL--GLHPDVVTFTTLLHGLCVEDRVSE 167

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           ++D  + M +  C P++VT    +  L                      +  R      +
Sbjct: 168 ALDFFHQMFETTCRPNVVTFTTLMNGL---------------------CREGRIVEAVAL 206

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           ++ M++  L P   T+  +V  +C+     +A+N
Sbjct: 207 LDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/538 (29%), Positives = 276/538 (51%), Gaps = 42/538 (7%)

Query: 135 EEAIRLFHTMVDEFH---CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           E A  L+  ++ E      K + ++F+ ++    + G+  +A+E ++ +   +  +  P+
Sbjct: 106 ENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLM---RDFDCKPD 162

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
              FNL++  + R      A+ ++ +M   N  PD+ TY  L+ GLCK  +  +A++L D
Sbjct: 163 LFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFD 222

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM   G  P  + ++++++GLC+  ++  A +L   M   GC  + +TYN L++G C  G
Sbjct: 223 EMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSG 282

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            LD A +LL  +     +   + YG +INGL +  R  +       M       +  +Y+
Sbjct: 283 YLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYT 342

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +I GL +EG+  +A+ L  +M E+G +P+T+ Y+ALI G C +G  DEAE +  E+  +
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
            C  N  TYS L+ G  ++G  +KA  I+K+M K  C+ + V ++ LI+GLC+  +L EA
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462

Query: 492 RMVWTQM-----------LSRGCKP--DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           R+++ QM           LS+G     D+ +   M+  LC +G + +A KL  ++  ++ 
Sbjct: 463 RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQL--VDS 520

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PD+ TYNIL+N  CK  NI+ +  L   M  +G  PD VT    +           D
Sbjct: 521 GVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLI-----------D 569

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           G          L++  R     +I E M++K   P++ST++ ++   CR   I  A++
Sbjct: 570 G----------LYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALS 617



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 253/511 (49%), Gaps = 56/511 (10%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           VL  ++     +  ++F  + +AY +A + E+A+  F  M D F CK  + +FN +L+ +
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD-FDCKPDLFAFNLILHFL 173

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
           +++  +  AL  YN ++     N+ P+ +T+ ++I  +C+     +A+ LF EM  R   
Sbjct: 174 VRKEAFLLALAVYNQMLKC---NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGIL 230

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P+   Y  ++ GLC+  ++ +A  L  +M+  GC    +T+NVL+NG CK+G L  A  L
Sbjct: 231 PNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTL 290

Query: 285 V-----DNMFLK----GCL--------------------------PNEVTYNTLIHGLCL 309
           +     D   L     GCL                          P+ + Y  +I GL  
Sbjct: 291 LQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQ 350

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G + +A++LL  M      P+ + Y  +I G   +G   +   + + + +     N + 
Sbjct: 351 EGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHT 410

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM- 428
           YS LI G+ K G    A  ++K+M + GC P+ V +++LI+GLC+  + +EA  + ++M 
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470

Query: 429 ----------INNGCAANAFTYSSL---MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
                     ++ G     F  +SL   M+   ESG   KA ++   +  +  + +   Y
Sbjct: 471 IVRKPSLFLRLSQG-TDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTY 529

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           ++LI+G C+ G +  A  ++ +M  +G  PD V Y ++I GL  AG  E+AL++F +M+ 
Sbjct: 530 NILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMV- 588

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            +    P+  TY  ++   C+++NIS ++ +
Sbjct: 589 -KKGCVPESSTYKTIMTWSCRENNISLALSV 618



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 179/356 (50%), Gaps = 8/356 (2%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L KEN  +    +L E++      +   F+VLI    + G   +A +    M    C P+
Sbjct: 103 LIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPD 162

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              +N ++H L  K     A+++ ++M+     P+ VTYG +I+GL K  +  D   +  
Sbjct: 163 LFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFD 222

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +R    N+ IYS ++SGL +  K  DA +L+ +M   GC  + + Y+ L++G C+ G
Sbjct: 223 EMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSG 282

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
             D+A  +L  +  +G       Y  L+ G F + +  +A   ++ M + N   + + Y+
Sbjct: 283 YLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYT 342

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           ++I GL ++G++ EA  +  +M  RG +PD + Y+++I G C+ G ++EA     E L L
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEA-----ESLRL 397

Query: 537 EPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           E       P+  TY+IL+  +CK   I+ +  +   M   GC P +VT N  +  L
Sbjct: 398 EISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 176/397 (44%), Gaps = 57/397 (14%)

Query: 35  SHRFFSVRSAVSSNKQMET-EPQGNAKSEQPFSDEIFNSTPKL--GSYQLGDSTFYSLIQ 91
           + R FS   A   N+ + T     N   +  + D+ F     L    + LG   +  LI 
Sbjct: 252 AQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLIN 311

Query: 92  HYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK 151
               +  ++   M   +M RE        +  + +   +   V EA+ L   M +     
Sbjct: 312 GLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRP 371

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
            T+  +N+++      G    A      I  +KH +  PN  T++++I  +C+ GL++ A
Sbjct: 372 DTI-CYNALIKGFCDMGYLDEAESLRLEI--SKH-DCFPNNHTYSILICGMCKNGLINKA 427

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV--------------DG 257
             +F+EM    C P + T+ +L++GLCK NRL+EA LL  +M++              D 
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDK 487

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
            F    +  V++  LC++G + +A KL+  +   G LP+  TYN LI+G C  GN++ A 
Sbjct: 488 VFDI-ASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAF 546

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            L   M     MP+ VTYGT+I+GL + GR                              
Sbjct: 547 KLFKEMQLKGHMPDSVTYGTLIDGLYRAGR------------------------------ 576

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
                 EDA+++++QM++KGC P +  Y  ++   CR
Sbjct: 577 -----NEDALEIFEQMVKKGCVPESSTYKTIMTWSCR 608



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 143/326 (43%), Gaps = 38/326 (11%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA-LEFYNHIVNAKHMNI 188
           K  L+ +A  +F  M ++  C  +V +FNS++N + +      A L FY   +  K    
Sbjct: 420 KNGLINKAQHIFKEM-EKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLF 478

Query: 189 LP---------NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           L          +  +  ++++ +C  G++  A +L  ++      PDI TY  L++G CK
Sbjct: 479 LRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCK 538

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              ++ A  L  EMQ+ G  P  VT+  LI+GL + G    A ++ + M  KGC+P   T
Sbjct: 539 FGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESST 598

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRM-------------VASKCMPNEVTYGTIINGLVKLG 346
           Y T++   C + N+  A+S+  +              V ++   NE           +L 
Sbjct: 599 YKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNE-----------ELQ 647

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
            A+   R L+ M+ +  + +   Y+  + GL +  +  +A  ++  + +     ++    
Sbjct: 648 TAI---RRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCV 704

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNG 432
            LI  LC V   D A ++    +  G
Sbjct: 705 MLIGRLCMVENLDMAMDVFLFTLERG 730


>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 847

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 163/556 (29%), Positives = 283/556 (50%), Gaps = 44/556 (7%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
            F    +L  Y+   S +  +++  + +   +  + +L  M R +  +  ++F F+  +Y
Sbjct: 232 FFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSY 291

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            +A  + +A+++  T++ +   +  +   N+ +++++      +AL F   +V    + I
Sbjct: 292 SRAGRLRDAMKVL-TLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMV---LIGI 347

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN +T+N +IK  C +  VD A++L  +MP + C PD  +Y T+M  LC++ RL+E   
Sbjct: 348 APNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRE 407

Query: 249 LLDEMQVDG-CFPTPVTFNVLINGL----------------------------------- 272
           L+ +MQ D    P  VT+N LI  L                                   
Sbjct: 408 LIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAY 467

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G++ +A +LV  MF KGC P+ VTY +++ G C  G LD+A  ++ +M    C PN 
Sbjct: 468 CKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNA 527

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY T +NGL + G++++  +++   EE  +  N   YS ++ GL +EGK  +A  + ++
Sbjct: 528 VTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVRE 587

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ KG  PN V  + L+  LCR GKP EA ++L E +N GCA N   +++++ GF +   
Sbjct: 588 MIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDD 647

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A+ +  DM   N   + V Y+ LI  L +  ++ EA  +  +ML +G  P  V Y S
Sbjct: 648 LEAALSLLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRS 707

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +IH  C  G VE+ LKL  +ML L+ + Q     YN+++  LCK   +  +  LL  ++ 
Sbjct: 708 VIHQYCRKGRVEDLLKLLKKML-LKSRFQT---AYNLVIEKLCKFGYLEEANSLLGEVLR 763

Query: 573 RGCDPDLVTCNIFLTA 588
                D  TC++ + +
Sbjct: 764 TASRTDAKTCHVLMES 779



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/542 (26%), Positives = 255/542 (47%), Gaps = 73/542 (13%)

Query: 154 VKSFN--SVLNVIIQEGLYHRALEFY---NHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
           V+S N   V  V++ +     AL F+   + +   +H     ++  + ++++ + +  L 
Sbjct: 208 VRSLNPLQVCAVLLSQEDERNALRFFYWADRLWRYRH-----DSSVYLVMLEILSKTKLC 262

Query: 209 DNAIQLFREMPVRNCE--PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
             A ++ R M  R  +  P+ + +  +M    +  RL +A+ +L  MQ  G  P     N
Sbjct: 263 QGAKRILRLMTRRRIQLCPEAFGF--VMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICN 320

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA- 325
             I+ L    EL +A +  + M L G  PN VTYN LI G C    +D+A+ L+D+M + 
Sbjct: 321 TAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSK 380

Query: 326 -----------------------------------SKCMPNEVTYGTIINGLVKLGRAVD 350
                                              SK +P+ VTY ++I  L K G   +
Sbjct: 381 GCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDE 440

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +L   E+ +F V++  YS ++    KEGK + A +L  +M  KGC P+ V Y++++D
Sbjct: 441 ALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLD 500

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G CR+GK D+A++++ +M  + C  NA TY++ + G   +GK  +A ++     +     
Sbjct: 501 GFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTP 560

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N + YSV++HGL  +GKL EA  V  +M+ +G  P+ V  + ++H LC  G   EA +L 
Sbjct: 561 NAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLL 620

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
            E  C+      +V  +  +++  C++ ++  ++ LL+ M      PD VT    + AL 
Sbjct: 621 KE--CMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDAL- 677

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
               A  D  +   EL ++                ML++ L P   T+  V+ + CR  R
Sbjct: 678 ----AKTDRIEEATELTMK----------------MLRQGLVPSPVTYRSVIHQYCRKGR 717

Query: 651 IQ 652
           ++
Sbjct: 718 VE 719



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 222/459 (48%), Gaps = 7/459 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K Y   H V++A+ L   M  +  C     S+ +V+ ++ ++   +   E    +   
Sbjct: 357 LIKGYCNVHQVDQAMELIDQMPSK-GCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTD 415

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               +LP+ +T+N +I+ + + G  D A+++ +E      + D   Y  ++   CKE ++
Sbjct: 416 S--KLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKI 473

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +A  L+ EM   GC P  VT+  +++G C+ G+L +A K++  M+   C PN VTY T 
Sbjct: 474 QKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTF 533

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++GLC  G   +A  +++        PN +TY  +++GL + G+  +   V+  M  + F
Sbjct: 534 LNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGF 593

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N    + L+  L ++GK  +A +L K+ M KGC  N V ++ +I G C+    + A  
Sbjct: 594 FPNPVEINLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALS 653

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L +M       +  TY++L+    ++ +  +A E+   M +   V + V Y  +IH  C
Sbjct: 654 LLDDMYLCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYC 713

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
             G++ +   +  +ML +       AY+ +I  LC  G +EEA  L  E+  L   S+ D
Sbjct: 714 RKGRVEDLLKLLKKMLLKS--RFQTAYNLVIEKLCKFGYLEEANSLLGEV--LRTASRTD 769

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
             T ++L+ +         +  +   M +R   PDL  C
Sbjct: 770 AKTCHVLMESYLNVGIPMSAYKVACRMFNRNLIPDLKLC 808



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 163/379 (43%), Gaps = 37/379 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLIQ  +  G       +L    + +  V +  +  I  AY K   +++A  L   M
Sbjct: 424 TYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEM 483

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +  C   V ++ SVL+   + G   +A +    +   KH +  PN +T+   +  +CR
Sbjct: 484 FSK-GCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMY--KH-HCKPNAVTYTTFLNGLCR 539

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G    A ++          P+  TY  ++ GL +E +L+EA  ++ EM   G FP PV 
Sbjct: 540 NGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVE 599

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            N+L++ LC++G+   A +L+     KGC  N V + T+IHG C K +L+ A+SLLD M 
Sbjct: 600 INLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY 659

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ VTY  +I+ L K  R  +   + M M  +    +   Y ++I    ++G+ E
Sbjct: 660 LCNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 719

Query: 385 D---------------------------------AMKLWKQMMEKGCKPNTVVYSALIDG 411
           D                                 A  L  +++    + +      L++ 
Sbjct: 720 DLLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMES 779

Query: 412 LCRVGKPDEAEEILFEMIN 430
              VG P  A ++   M N
Sbjct: 780 YLNVGIPMSAYKVACRMFN 798



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/275 (23%), Positives = 122/275 (44%), Gaps = 36/275 (13%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +++ V++ + +EG  + A +    ++        PN +  NL++ ++CR G    A QL 
Sbjct: 564 TYSVVVHGLRREGKLNEACDVVREMIGK---GFFPNPVEINLLVHSLCRDGKPREANQLL 620

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           +E   + C  ++  + T++ G C+++ L+ A+ LLD+M +    P  VT+  LI+ L K 
Sbjct: 621 KECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDTVTYTALIDALAKT 680

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTY---------------------------------NT 302
             +  A +L   M  +G +P+ VTY                                 N 
Sbjct: 681 DRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVEDLLKLLKKMLLKSRFQTAYNL 740

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I  LC  G L++A SLL  ++ +    +  T   ++   + +G  +   +V   M  R 
Sbjct: 741 VIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESYLNVGIPMSAYKVACRMFNRN 800

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
              +  +   +   L  EGK E+A +L  + +E+G
Sbjct: 801 LIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERG 835


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/559 (28%), Positives = 273/559 (48%), Gaps = 30/559 (5%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  + +++ +    ++A+  F  M  +  CK  + +F  +++ + + G+  +A E ++ 
Sbjct: 156 SFNILIRSFARTRRADDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAGMDEKAFEVFHE 214

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++      + P+      +++T+ +   V  A ++F +M      PD   Y T++DGL K
Sbjct: 215 MMAMGF--VPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAK 272

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
                EA+ +LD M    C PT VT+ +L+N LCK G L RA +L   M   G  PN V 
Sbjct: 273 AGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVI 332

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y +LIHG    G + +A SL D MV +   P+ +T+  +I+GL K G     A+    M 
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMM 392

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 N   Y+T+I GL K G+  +A ++ K M+  GC P++V Y  L+DG C++G+ D
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV----EIWKDMAKNNCVYNEVCY 475
           EA ++L E+     + N   YSSL+KG  + G     +    E  K  A+N  +   +C 
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAEN--LDPGLCC 510

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA--GSVEEALKLFNEM 533
           S+++ GLC+ G+L EA  ++ +M+S GCKPD   Y+ +I+GLC +    VE A  L +++
Sbjct: 511 SIIV-GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDL 569

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             +     PD  TY  L   LCK   +  ++ +L     RG + D+V      T L  + 
Sbjct: 570 EMV--GYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQG 627

Query: 594 EAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
           +  +       E+  +               L K ++     K  + M+ K   P  +T+
Sbjct: 628 QVDR-AVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATY 686

Query: 639 ERVVQELCRPKRIQAAINK 657
             +VQ LC    +  A ++
Sbjct: 687 TALVQALCHAGNVDEAFHR 705



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 261/553 (47%), Gaps = 83/553 (15%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  V+EA  +F  M ++        ++N++++ + + G    AL+  ++++       +
Sbjct: 237 KAKRVKEAREVFGQM-EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA---CV 292

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +T+ +++ ++C+ G ++ A +LFR M      P+   Y +L+ G  K  R+ EA  L
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            DEM   G  P  +T  V+I+GLCK+G   +AAK  + M   GC PN VTY T+I GL  
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +  A  ++  M+A  C P+ VTY  +++G  KLGR  + A++L  +++     N  +
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQL 472

Query: 370 YSTL------------------------------------ISGLFKEGKAEDAMKLWKQM 393
           YS+L                                    I GL K G+ ++A +++++M
Sbjct: 473 YSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRM 532

Query: 394 MEKGCKPNTVVYSALIDGLCR-------------------------------------VG 416
           + +GCKP+   Y+ LI+GLCR                                     +G
Sbjct: 533 VSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIG 592

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + D A ++L E  + G  A+   Y++L  G    G+  +AV ++++M +     +   Y 
Sbjct: 593 EVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYC 652

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            +I+GL +  KL +A   + +M+ +G KP V  Y++++  LC+AG+V+EA   F  ML  
Sbjct: 653 CIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLA- 711

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLE 594
             +    V  Y+ L++  CK   +  ++ L   M+ RG  P  VT       L    K E
Sbjct: 712 RGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTE 771

Query: 595 APQDGTDFLNELA 607
             Q   + L E+A
Sbjct: 772 KAQ---ELLQEMA 781



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 230/477 (48%), Gaps = 49/477 (10%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +   + K+  ++EA  LF  MV+  + +  V +   +++ + + G + +A + +  +
Sbjct: 333 YTSLIHGFAKSGRMKEACSLFDEMVEAGY-RPDVITHTVMIDGLCKSGNFEQAAKSFEEM 391

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           +        PN +T+  +I+ + ++G V NA ++ + M    C PD  TY  L+DG CK 
Sbjct: 392 MRG---GCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKL 448

Query: 241 NRLDEAVLLLDEMQVDGCFPTP-------------------------------VTFNV-- 267
            RLDEA  LLDE+  D C  +P                                  N+  
Sbjct: 449 GRLDEAAQLLDEL--DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDP 506

Query: 268 -----LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL--KGNLDKAVSLL 320
                +I GLCK G L  A ++   M  +GC P+  TYN LI+GLC   +  +++A +LL
Sbjct: 507 GLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALL 566

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             +     +P+ VTY  +  GL K+G      ++L     R ++ +   Y+ L +GL  +
Sbjct: 567 HDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQ 626

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ + A+ L+++M+ +G  P+   Y  +I+GL +  K ++A +   EMI  G      TY
Sbjct: 627 GQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATY 686

Query: 441 SSLMKGFFESGKGHKAVEIWKDM-AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           ++L++    +G   +A   ++ M A+   V + + Y  LIHG C+  K+  A  ++  M+
Sbjct: 687 TALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMI 746

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           SRG  P  V  +S+  GL  +G  E+A +L  EM      S P   T+  +L+ L K
Sbjct: 747 SRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEM--AAGGSPPHAATFTAILDGLRK 801



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 223/506 (44%), Gaps = 44/506 (8%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           ++E+F      G ++     + SLI  +A SG  K    +   M          +   + 
Sbjct: 314 AEELFRVMAASG-FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMI 372

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
               K+   E+A + F  M+    CK  V ++ +++  + + G    A      ++    
Sbjct: 373 DGLCKSGNFEQAAKSFEEMM-RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA--- 428

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY--------------- 230
               P+++T+  ++   C+LG +D A QL  E+   +  P++  Y               
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVEN 488

Query: 231 ---------------------CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
                                C+++ GLCK  RLDEA  +   M  +GC P   T+N+LI
Sbjct: 489 TLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548

Query: 270 NGLCKNGE--LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           NGLC++ E  + RA  L+ ++ + G LP+ VTY  L  GLC  G +D+AV +L+   +  
Sbjct: 549 NGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
              + V Y  +  GL   G+      +   M  +    +   Y  +I+GL K  K EDA 
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDAC 668

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKG 446
           K + +M+ KG KP    Y+AL+  LC  G  DEA      M+  G    +   Y +L+ G
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHG 728

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           F ++ K   A+++++DM     V   V  + L  GL   GK  +A+ +  +M + G  P 
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPH 788

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNE 532
              +++++ GL  +    + LKL  E
Sbjct: 789 AATFTAILDGLRKSDESGKLLKLVQE 814



 Score = 39.3 bits (90), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 33/135 (24%), Positives = 53/135 (39%), Gaps = 27/135 (20%)

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           Q DVFTYN L+N L  + N S    +   M+  G  P+  + NI + +      A    T
Sbjct: 116 QHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVT 175

Query: 601 DFLNELAIRLFKRQR--------------------TSGGFKIV-EVMLQKFLSPQTSTWE 639
            F       + KR+R                        F++  E+M   F+ P  +   
Sbjct: 176 CF------EIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229

Query: 640 RVVQELCRPKRIQAA 654
            +V+ L + KR++ A
Sbjct: 230 AMVRTLLKAKRVKEA 244


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 156/592 (26%), Positives = 282/592 (47%), Gaps = 58/592 (9%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           + ++  A +GD   +++ L  MR       E + +    A+ +A   + A++ F+  V +
Sbjct: 60  AAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHD 119

Query: 148 FHCKRTVKS--FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
             C R  +   +N +++ +++E +    +  Y+   N +   + PN  T+NL+++ +C+ 
Sbjct: 120 LGCARPTEPRLYNHLIDALLRENMVGAVVLVYD---NMRKDGVHPNVFTYNLLVRALCQN 176

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL--------------- 250
             V  A ++  EM  + C PD  TY T++  LCK +RLDEA  +L               
Sbjct: 177 NRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVL 236

Query: 251 ---------------DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
                           +M   G  P  +T+  +++  CK GEL  A  ++  M + GC P
Sbjct: 237 ALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTP 296

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N VT+  L+ GL   G +  A+ +   MVA    P+ V+Y  +I GL  +G     + +L
Sbjct: 297 NVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSIL 356

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
            SME+     N   YSTLI G  K G    A+ +W  M   GCKPN VVY+ ++D  C+ 
Sbjct: 357 NSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKK 416

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
              ++A+ ++ +M+   C  N  T+++L++   +  +  +A+ ++ +M ++ CV N   Y
Sbjct: 417 LMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTY 476

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + LIHGL  +G   +A  + T+M S G +  +V Y++++ GLC      EA+    +M+ 
Sbjct: 477 NELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIV 536

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
                QP+ FT++ +++A CK+  +  +  +L +M    C  +++   I +  L  +   
Sbjct: 537 --QGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQ--- 591

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                D L +    L K             ML + + P T TW  +V+ + R
Sbjct: 592 -----DKLVDAMTYLLK-------------MLYEGIYPNTVTWNVLVRGVFR 625



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 200/416 (48%), Gaps = 25/416 (6%)

Query: 257 GCF-PT-PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           GC  PT P  +N LI+ L +   +G    + DNM   G  PN  TYN L+  LC    + 
Sbjct: 121 GCARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVG 180

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A  +LD M    C P++VTY TI++ L KL R  +   VL +M           Y+ ++
Sbjct: 181 AARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAAS-----YNAIV 235

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L +E + ++   +   M+ +G +PN + Y+ ++D  C+ G+   A  IL  M+  GC 
Sbjct: 236 LALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCT 295

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  T+++L++G F+ G+ H A+++W+ M       + V Y++LI GLC  G L+ A  +
Sbjct: 296 PNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSI 355

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
              M   GC P+V  YS++I G   AG +  A+ ++N+M       +P+V  Y  +++  
Sbjct: 356 LNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMS--RSGCKPNVVVYTNMVDVF 413

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE---------------KLEAPQDG 599
           CK+   + +  L++ M+   C P+ VT N  + +L +               +     +G
Sbjct: 414 CKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNG 473

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             + NEL   LF+         +V  M    +     T+  VV  LC+ +  + A+
Sbjct: 474 RTY-NELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 528



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 193/424 (45%), Gaps = 33/424 (7%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK-LVDNMFLKGCL- 294
           L     +D   L L EM++ G   T       +    + G   RA K     +   GC  
Sbjct: 65  LAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCAR 124

Query: 295 PNEVT-YNTLIHGLCLKGNLDKAVSLL-DRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           P E   YN LI  L L+ N+  AV L+ D M      PN  TY  ++  L +  R     
Sbjct: 125 PTEPRLYNHLIDAL-LRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAAR 183

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           ++L  M  +    ++  Y+T++S L K  + ++A ++   M      P    Y+A++  L
Sbjct: 184 KMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLAL 238

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           CR  +  E   ++ +M+  G   N  TY++++  F ++G+   A  I   M    C  N 
Sbjct: 239 CREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNV 298

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V ++ L+ GL +DG++ +A  +W  M++ G  P  V+Y+ +I GLC+ G ++ A  + N 
Sbjct: 299 VTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNS 358

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   +    P+V TY+ L++   K  ++  +I + N M   GC P++V     +    +K
Sbjct: 359 ME--QHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKK 416

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           L                +F + ++     +++ ML +   P T T+  +++ LC  +R+ 
Sbjct: 417 L----------------MFNQAKS-----LIDKMLLENCPPNTVTFNTLIRSLCDCRRVG 455

Query: 653 AAIN 656
            A+ 
Sbjct: 456 RALG 459



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 4/191 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI+   +         V + MRR   V   +++  +     +     +A+ +   M
Sbjct: 440 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM 499

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                 + ++ ++N+V++ + Q  +   A+ F   ++      I PN  TF+ +I   C+
Sbjct: 500 -QSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIV---QGIQPNAFTFSAIIHAYCK 555

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A  +   M V NC  +I  Y  LM  LC +++L +A+  L +M  +G +P  VT
Sbjct: 556 EGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 615

Query: 265 FNVLINGLCKN 275
           +NVL+ G+ +N
Sbjct: 616 WNVLVRGVFRN 626


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/494 (31%), Positives = 261/494 (52%), Gaps = 10/494 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI   +  G  +  E++L ++ +        ++  +   + +   ++ A  +F  M
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V E  C     ++++++N +  EG    AL+    ++      I P   T+ L I  +C 
Sbjct: 260 VKE-GCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEK---GIEPTVYTYTLPITALCA 315

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +   + AI+L   M  R C P++ TY  L+ GL +  +L+ A+ L  +M  +G  P  VT
Sbjct: 316 IEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LIN LC  G    A K+   M   G L N  TYN +I GLCL G+++KA+ L ++M+
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P  VTY T+ING +  G   + AR+L  M+E     +E+ Y+ L+SG  K GK E
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A   +++M+E G  PN V Y+ALIDG  + GK D A  +L  M   GC  N  +Y++++
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  +  +  +A +I   M +   + N + Y+ LI GLC +G+ + A  ++  M  R C 
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P++  YSS+I+GLC  G  +EA ++ +E+ C     +P + TY+ L++ LC++     + 
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAERM-SEIGC-----EPTLDTYSTLVSGLCRKGRFYEAE 669

Query: 565 DLLNSMMDRGCDPD 578
            L+  M +RG  PD
Sbjct: 670 QLVKDMKERGFCPD 683



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/526 (30%), Positives = 254/526 (48%), Gaps = 31/526 (5%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            K  +VE A  L+  M++    + ++ +FN+++N++ ++G    A    + I      ++
Sbjct: 174 AKFEMVEGARNLYKQMLNS-GIQPSLLTFNTLINILSKKGKVREAELILSQIF---QYDL 229

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P+  T+  +I   CR   +D A  +F  M    C+P+  TY TL++GLC E R+DEA+ 
Sbjct: 230 SPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALD 289

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L+EM   G  PT  T+ + I  LC       A +LV  M  +GC PN  TY  LI GL 
Sbjct: 290 MLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLS 349

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G L+ A+ L  +M+    +PN VTY  +IN L   GR     ++   ME      N  
Sbjct: 350 RLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQ 409

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ +I GL   G  E AM L+++M++ G  P  V Y+ LI+G    G  + A  +L  M
Sbjct: 410 TYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM 469

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
             NGC  + +TY+ L+ GF + GK   A   +++M +     N V Y+ LI G  +DGK+
Sbjct: 470 KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKV 529

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  +M   GC P+V +Y+++I+GL       EA K+ ++M+  E    P+V TY 
Sbjct: 530 DIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV--EQGLLPNVITYT 587

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            L++ LC+      +  + + M  R C P+L T +  +  L +  E   D  + ++E+  
Sbjct: 588 TLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ--EGKADEAERMSEIGC 645

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                                   P   T+  +V  LCR  R   A
Sbjct: 646 E-----------------------PTLDTYSTLVSGLCRKGRFYEA 668



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 161/573 (28%), Positives = 267/573 (46%), Gaps = 60/573 (10%)

Query: 125 FKAYGKAHLV------EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY-------- 170
            KA+  A +V      E  I+ F+ +      K  +  F S+LN ++++ ++        
Sbjct: 73  LKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRI 132

Query: 171 ------------HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
                        R  +F N I     M    +  + N ++  + +  +V+ A  L+++M
Sbjct: 133 LMIKACRNEEEIRRVADFLNEISG---MGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM 189

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                +P + T+ TL++ L K+ ++ EA L+L ++      P   T+  LI G C+N  L
Sbjct: 190 LNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNL 249

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A  + D M  +GC PN VTY+TLI+GLC +G +D+A+ +L+ M+     P   TY   
Sbjct: 250 DLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I  L  +    +   ++  M++R    N   Y+ LISGL + GK E A+ L+ +M+++G 
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PNTV Y+ALI+ LC  G+   A +I   M  +G  AN  TY+ ++KG    G   KA+ 
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +++ M K   +   V Y+ LI+G    G +  A  +   M   GC+PD   Y+ ++ G  
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 489

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E A   F EM  +E    P+  +Y  L++   K   +  ++ LL  M + GC+P+
Sbjct: 490 KWGKLESASFYFQEM--VECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPN 547

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
           + + N  +  L                      K  R S   KI + M+++ L P   T+
Sbjct: 548 VESYNAVINGLS---------------------KENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 639 ERVVQELCRPKRIQAAIN--------KCWSNLY 663
             ++  LCR  R Q A          KC  NLY
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 243/482 (50%), Gaps = 15/482 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI   +  G  +    + ++M +E  V    ++  +            A+++FH M
Sbjct: 340 TYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM 399

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                   T +++N ++  +   G   +A+  +  ++    M  LP  +T+N +I     
Sbjct: 400 EGHGSLANT-QTYNEIIKGLCLGGDIEKAMVLFEKMLK---MGPLPTVVTYNTLINGYLT 455

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V+NA +L   M    CEPD +TY  L+ G  K  +L+ A     EM   G  P PV+
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVS 515

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+G  K+G++  A  L+  M   GC PN  +YN +I+GL  +    +A  + D+MV
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +PN +TY T+I+GL + GR     ++   ME+RK   N Y YS+LI GL +EGKA+
Sbjct: 576 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 635

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A    ++M E GC+P    YS L+ GLCR G+  EAE+++ +M   G   +   Y SL+
Sbjct: 636 EA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
               ++ +   A++I+  +       +   Y  LI  LC+ G++ EA+ ++  ML +   
Sbjct: 692 IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 751

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHS 563
            D + ++ ++ GL   G ++  +KL + M   E K+  P++ TY IL   L   S I  S
Sbjct: 752 ADEIVWTVLVDGLLKEGELDLCMKLLHIM---ESKNFTPNIQTYVILGREL---SRIGKS 805

Query: 564 ID 565
           I+
Sbjct: 806 IE 807



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 222/453 (49%), Gaps = 8/453 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI      G F +   + + M     +   +++  I K       +E+A+ LF  M
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +     TV ++N+++N  + +G  + A    + +   K     P+  T+N ++    +
Sbjct: 435 L-KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLM---KENGCEPDEWTYNELVSGFSK 490

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +++A   F+EM      P+  +Y  L+DG  K+ ++D A+ LL  M+  GC P   +
Sbjct: 491 WGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVES 550

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N +INGL K      A K+ D M  +G LPN +TY TLI GLC  G    A  +   M 
Sbjct: 551 YNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDME 610

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
             KC+PN  TY ++I GL + G+A +  R    M E         YSTL+SGL ++G+  
Sbjct: 611 KRKCLPNLYTYSSLIYGLCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFY 666

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +L K M E+G  P+  +Y +L+   C+  + D A +I   +   G   +   Y +L+
Sbjct: 667 EAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALI 726

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
               ++G+  +A  ++ +M +     +E+ ++VL+ GL ++G+L     +   M S+   
Sbjct: 727 CALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFT 786

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           P++  Y  +   L   G   E+  L +++  L+
Sbjct: 787 PNIQTYVILGRELSRIGKSIESEPLADKLKVLK 819


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/421 (31%), Positives = 230/421 (54%), Gaps = 8/421 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ + +N ++   C  G +D A +L  +MP+   EPD YTY TL+ GLC   R   A+++
Sbjct: 122 PDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRGRTGNALVV 178

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LD+M   GC P  VT+ +L+   CK     +A KL+D M  KGC P+ +TYN +++G+C 
Sbjct: 179 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQ 238

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G +D A+  L  + +  C PN V+Y  ++ GL    R  D  +++  M ++ +  N   
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ LIS L + G  E AM++  Q+ + GC PN++ Y+ ++   C+  K D A   +  M+
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + GC  +  +Y++L+      G+   AVE+   +    C    + Y+ +I GL + GK +
Sbjct: 359 SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTK 418

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  +  +M+++G +PD++ YS++  GLC    +EEA++ F ++   +   +P+   YN 
Sbjct: 419 EALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKV--QDMGIRPNTVLYNA 476

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK-EKLEAPQDGTDFLNELAI 608
           +L  LCK+    ++IDL   M+  GC P+  T  I +  L  E L   ++  + L EL  
Sbjct: 477 ILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLV--KEARELLGELCS 534

Query: 609 R 609
           R
Sbjct: 535 R 535



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 208/397 (52%), Gaps = 10/397 (2%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +IK +C  G    A ++        CEPD+  Y  ++ G C   +LD A  L+ +M ++ 
Sbjct: 100 LIKKLCASGRTAEARRVLAA-----CEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME- 153

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P   T+N LI GLC  G  G A  ++D+M  +GC+P+ VTY  L+   C +    +A+
Sbjct: 154 --PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAM 211

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            LLD M A  C P+ +TY  ++NG+ + GR  D    L S+       N   Y+ ++ GL
Sbjct: 212 KLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGL 271

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
               + EDA KL  +M +KG  PN V ++ LI  LCR G  + A E+L ++   GC  N+
Sbjct: 272 CTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS 331

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            +Y+ ++  F +  K  +A+   + M    C  + V Y+ L+  LC  G++  A  +  Q
Sbjct: 332 LSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           +  +GC P +++Y+++I GL  AG  +EAL+L NEM  +    QPD+ TY+ + + LC++
Sbjct: 392 LKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEM--VTKGLQPDIITYSTISSGLCRE 449

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
             I  +I     + D G  P+ V  N  L  L ++ E
Sbjct: 450 DRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRE 486



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 206/389 (52%), Gaps = 2/389 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M + P++ T+N +I+ +C  G   NA+ +  +M  R C PD+ TY  L++  CK +   +
Sbjct: 150 MPMEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 209

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ LLDEM+  GC P  +T+NV++NG+C+ G +  A + + ++   GC PN V+YN ++ 
Sbjct: 210 AMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC     + A  L+  M      PN VT+  +I+ L + G       VL  + +     
Sbjct: 270 GLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP 329

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y+ ++    K+ K + AM   + M+ +GC P+ V Y+ L+  LCR G+ D A E+L
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELL 389

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            ++ + GC     +Y++++ G  ++GK  +A+E+  +M       + + YS +  GLC +
Sbjct: 390 HQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            ++ EA   + ++   G +P+ V Y++++ GLC       A+ LF  M  +     P+  
Sbjct: 450 DRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYM--ISNGCMPNES 507

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRG 574
           TY IL+  L  +  +  + +LL  +  RG
Sbjct: 508 TYTILIEGLTYEGLVKEARELLGELCSRG 536



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 208/385 (54%), Gaps = 4/385 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI+     G   +  +VL  M R   V    ++  + +A  K    ++A++L   M
Sbjct: 158 TYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 217

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +  C   + ++N V+N I QEG    A+EF   +         PNT+++N+V+K +C 
Sbjct: 218 RAK-GCAPDIITYNVVVNGICQEGRVDDAIEFLKSL---PSHGCEPNTVSYNIVLKGLCT 273

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               ++A +L  EM  +   P++ T+  L+  LC+   ++ A+ +LD++   GC P  ++
Sbjct: 274 AERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLS 333

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N +++  CK  ++ RA   V+ M  +GC P+ V+YNTL+  LC  G +D AV LL ++ 
Sbjct: 334 YNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 393

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C P  ++Y T+I+GL K G+  +   +L  M  +    +   YST+ SGL +E + E
Sbjct: 394 DKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIE 453

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A++ + ++ + G +PNTV+Y+A++ GLC+  +   A ++   MI+NGC  N  TY+ L+
Sbjct: 454 EAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILI 513

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCV 469
           +G    G   +A E+  ++     V
Sbjct: 514 EGLTYEGLVKEARELLGELCSRGVV 538



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 205/423 (48%), Gaps = 33/423 (7%)

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           + GL +   L+EA+ L++ M        P     LI  LC +G    A ++     L  C
Sbjct: 66  LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRV-----LAAC 120

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVDGA 352
            P+ + YN ++ G C+ G LD A     R+VA   M P+  TY T+I GL   GR  +  
Sbjct: 121 EPDVMAYNAMVAGYCVTGQLDAA----RRLVADMPMEPDSYTYNTLIRGLCGRGRTGNAL 176

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            VL  M  R    +   Y+ L+    K    + AMKL  +M  KGC P+ + Y+ +++G+
Sbjct: 177 VVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGI 236

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G+ D+A E L  + ++GC  N  +Y+ ++KG   + +   A ++  +M++     N 
Sbjct: 237 CQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNV 296

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V +++LI  LC  G +  A  V  Q+   GC P+ ++Y+ ++H  C    ++ A+     
Sbjct: 297 VTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVEL 356

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M  +     PD+ +YN LL ALC+   +  +++LL+ + D+GC P L++ N  +      
Sbjct: 357 M--VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVI------ 408

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                DG          L K  +T    +++  M+ K L P   T+  +   LCR  RI+
Sbjct: 409 -----DG----------LTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIE 453

Query: 653 AAI 655
            AI
Sbjct: 454 EAI 456



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 148/295 (50%), Gaps = 7/295 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  + K    A   E+A +L   M  + +    V +FN +++ + + GL   A+E  + 
Sbjct: 263 SYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV-TFNMLISFLCRRGLVEPAMEVLDQ 321

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I         PN+L++N ++   C+   +D A+     M  R C PDI +Y TL+  LC+
Sbjct: 322 I---PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCR 378

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              +D AV LL +++  GC P  +++N +I+GL K G+   A +L++ M  KG  P+ +T
Sbjct: 379 GGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIIT 438

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+T+  GLC +  +++A+    ++      PN V Y  I+ GL K     +   + + M 
Sbjct: 439 YSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMI 498

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA---LIDG 411
                 NE  Y+ LI GL  EG  ++A +L  ++  +G     ++  A   L+DG
Sbjct: 499 SNGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKGLINKAAIRLLDG 553



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 73/215 (33%), Gaps = 85/215 (39%)

Query: 505 PDVVAYSSM----IHGLCNAGSVEEALKLFNEMLCLEPKS-------------------- 540
           P+ V + ++    + GL   G +EEAL+L   M  LEP +                    
Sbjct: 53  PNAVPHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAE 112

Query: 541 --------QPDVFTY--------------------------------NILLNALCKQSNI 560
                   +PDV  Y                                N L+  LC +   
Sbjct: 113 ARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEPDSYTYNTLIRGLCGRGRT 172

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
            +++ +L+ M+ RGC PD+VT  I L A                       KR       
Sbjct: 173 GNALVVLDDMLRRGCVPDVVTYTILLEA---------------------TCKRSGYKQAM 211

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           K+++ M  K  +P   T+  VV  +C+  R+  AI
Sbjct: 212 KLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAI 246


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/497 (31%), Positives = 252/497 (50%), Gaps = 26/497 (5%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
            LG    + L    AN G F SL                K+  F+  +  KA+ V+ + +
Sbjct: 140 HLGFGVVFELFSLLANKGLFPSL----------------KTCNFLLSSLVKANEVKMSYQ 183

Query: 140 LFHTMVDEFHCKRT--VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           +F  M    HC  T  V  F++++N     G    A+E +  +   + + + PN +T+N 
Sbjct: 184 VFDIMC---HCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKM---EKVGVAPNVVTYNN 237

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I  +C+ G +D A Q   +M     +P + TY  L++GL K  R DEA  +L EM   G
Sbjct: 238 IIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRG 297

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  V +N LI+G C+ G +  A ++ D+M   G  PN VT N+LI G C    ++ A 
Sbjct: 298 YAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAE 357

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            LL+ M+    + N+ T+ ++I+ L    R       +M M  R F  N+ + + L+SGL
Sbjct: 358 HLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGL 417

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            + GK  +A++LW +++EKG   NTV  +ALI GLC  G  +EA ++L EM+  G   ++
Sbjct: 418 CQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDS 477

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            +Y++L+    + GK  +  ++ ++M +     +   Y++L+HGLC  GK+ EA  +W +
Sbjct: 478 ISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHE 537

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
               G  PD   Y  MI G C A  VEE  KLF EM+ +  K + +   Y  L+ A C+ 
Sbjct: 538 CKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTM--KIEQNAVVYGTLIRAYCEN 595

Query: 558 SNISHSIDLLNSMMDRG 574
            N+  +  L + M  RG
Sbjct: 596 GNMREAFRLRDDMRSRG 612



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 156/573 (27%), Positives = 264/573 (46%), Gaps = 62/573 (10%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  +  A+     V++AI LF  M ++      V ++N++++ + + G    A +F   +
Sbjct: 200 FSTMVNAFCTGGRVDDAIELFRKM-EKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKM 258

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +   + P+ +T+ ++I  + +L   D A  + +EM  R   P+   Y TL+DG C+ 
Sbjct: 259 EKER---VKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRI 315

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             +  A+ + D+M  +G  P  VT N LI G CK+ ++  A  L++ M   G + N+ T+
Sbjct: 316 GNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTF 375

Query: 301 NTLIHGLCLKGNLDKAV---------------SLLDRMVASKCM---------------- 329
            ++IH LCLK   D A+                LL  +V+  C                 
Sbjct: 376 TSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLE 435

Query: 330 ----PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
                N VT   +I+GL + G   + A++L  M ER   ++   Y+TLI    KEGK E+
Sbjct: 436 KGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEE 495

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
             KL ++M+ +G +P+   Y+ L+ GLC +GK +EA  +  E   NG   +A+TY  ++ 
Sbjct: 496 GFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMID 555

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G+ ++ +  +  +++++M       N V Y  LI   CE+G +REA  +   M SRG   
Sbjct: 556 GYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQ 615

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
               YSS+IHGL N G V+ A +L +EM   +    P+V  Y  L+   CK   +     
Sbjct: 616 TSATYSSLIHGLSNIGLVDSANQLLDEM--RKEGLSPNVVCYTALIGGYCKLGQMHKVDS 673

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
           +L  M      P+ +T  I +     KL   +     LNE+A                  
Sbjct: 674 ILQEMSINNVHPNKITYTIMING-HCKLGNMKAAAKLLNEMA------------------ 714

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
             QK + P   T+  +    C+  +++ A+  C
Sbjct: 715 --QKGIVPDAVTYNALTNGFCKEGKMEEALKVC 745



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 218/438 (49%), Gaps = 6/438 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + + Y K++ +E A  L   M+          +F SV++ +  +  +  AL F   I+  
Sbjct: 343 LIQGYCKSNQMEHAEHLLEEMLTGGGVINQ-GTFTSVIHRLCLKCRFDSALLF---IMEM 398

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
              N  PN     L++  +C+ G    AI+L+  +  +    +  T   L+ GLC+    
Sbjct: 399 LLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSK 458

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA  LL EM   G     +++N LI   CK G++    KL + M  +G  P+  TYN L
Sbjct: 459 EEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNML 518

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +HGLC  G +++A  L      +   P+  TYG +I+G  K  R  +G ++   M   K 
Sbjct: 519 LHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKI 578

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N  +Y TLI    + G   +A +L   M  +G    +  YS+LI GL  +G  D A +
Sbjct: 579 EQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQ 638

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L EM   G + N   Y++L+ G+ + G+ HK   I ++M+ NN   N++ Y+++I+G C
Sbjct: 639 LLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHC 698

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G ++ A  +  +M  +G  PD V Y+++ +G C  G +EEALK+  +++     S  D
Sbjct: 699 KLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVC-DLMSTGGISLDD 757

Query: 544 VFTYNILLNALCKQSNIS 561
           + TY  L++   K   +S
Sbjct: 758 I-TYTTLIDGWHKPLTVS 774



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 139/532 (26%), Positives = 239/532 (44%), Gaps = 41/532 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I     +G          +M +E+      ++  +     K    +EA  +   M
Sbjct: 234 TYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEM 293

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D  +    V  +N++++   + G    AL+  + +++     I PN++T N +I+  C+
Sbjct: 294 SDRGYAPNNV-VYNTLIDGYCRIGNISTALQIRDDMISN---GISPNSVTCNSLIQGYCK 349

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +++A  L  EM       +  T+ +++  LC + R D A+L + EM +    P    
Sbjct: 350 SNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGL 409

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
             +L++GLC+NG+   A +L   +  KG   N VT N LIHGLC  G+ ++A  LL  M+
Sbjct: 410 LTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEML 469

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               + + ++Y T+I    K G+  +G ++   M  R    + Y Y+ L+ GL   GK E
Sbjct: 470 ERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIE 529

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A  LW +  + G  P+   Y  +IDG C+  + +E E++  EM+      NA  Y +L+
Sbjct: 530 EAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLI 589

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           + + E+G   +A  +  DM           YS LIHGL   G +  A  +  +M   G  
Sbjct: 590 RAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLS 649

Query: 505 PDVVAYSS-----------------------------------MIHGLCNAGSVEEALKL 529
           P+VV Y++                                   MI+G C  G+++ A KL
Sbjct: 650 PNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKL 709

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            NEM   +    PD  TYN L N  CK+  +  ++ + + M   G   D +T
Sbjct: 710 LNEMA--QKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDIT 759



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 75/191 (39%), Gaps = 45/191 (23%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           +T+ SLI   +N G   S   +L  MR+E     VV   + I  +   G+ H V+     
Sbjct: 618 ATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDS---- 673

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
                                  I+QE             +N  H N +  T+  N   K
Sbjct: 674 -----------------------ILQE-----------MSINNVHPNKITYTIMINGHCK 699

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
               LG +  A +L  EM  +   PD  TY  L +G CKE +++EA+ + D M   G   
Sbjct: 700 ----LGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISL 755

Query: 261 TPVTFNVLING 271
             +T+  LI+G
Sbjct: 756 DDITYTTLIDG 766



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 37/176 (21%), Positives = 77/176 (43%), Gaps = 16/176 (9%)

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +++ + ++G  P +   + ++  L  A  V+ + ++F +++C      PDV+ ++ ++NA
Sbjct: 149 LFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVF-DIMC-HCGVTPDVYLFSTMVNA 206

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL------------KEKLEAPQDGTD 601
            C    +  +I+L   M   G  P++VT N  +  L            KEK+E  +    
Sbjct: 207 FCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPS 266

Query: 602 FLNE--LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +    L   L K +R      I++ M  +  +P    +  ++   CR   I  A+
Sbjct: 267 LVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTAL 322


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/496 (31%), Positives = 259/496 (52%), Gaps = 8/496 (1%)

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE--FHCKRTVKSFN 158
           ++++VL RM     +    S+  + K     +  +EA+ L H M D+        V S+ 
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           +V+N   +EG   +A   Y+ +++     ILP+ +T+N +I  +C+   +D A+++   M
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDR---GILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                 PD  TY +++ G C   +  EA+  L +M+ DG  P  VT+++L++ LCKNG  
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A K+ D+M  +G  P   TY TL+ G   KG L +   LLD MV +   P+   +  +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I      G+      V   M ++  + N   Y  +I  L K G+ EDAM  ++QM+++G 
Sbjct: 378 ICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P  +VY++LI GLC   K + AEE++ EM++ G   N   ++S++    + G+  ++ +
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +++ M +     N + Y+ LI+G C  GK+ EA  + + M+S G KP+ V YS++I+G C
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
               +E+AL LF EM        PD+ TYNI+L  L +    + + +L   + + G   +
Sbjct: 558 KISRMEDALVLFKEM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615

Query: 579 LVTCNIFLTAL-KEKL 593
           L T NI L  L K KL
Sbjct: 616 LSTYNIILHGLCKNKL 631



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 263/547 (48%), Gaps = 27/547 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + K         +A+ +    + E  C   V S+N +L  +  E     ALE  + 
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + + +     P+ +++  VI    + G  D A   + EM  R   PD+ TY +++  LCK
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              +D+A+ +L+ M  +G  P  +T+N +++G C +G+   A   +  M   G  P+ VT
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+ L+  LC  G   +A  + D M      P   TYGT++ G    G  V+   +L  M 
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
               H + Y++S LI     +GK + AM ++ +M ++G  PN V Y A+I  LC+ G+ +
Sbjct: 364 RNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A     +MI+ G +     Y+SL+ G     K  +A E+  +M       N + ++ +I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
              C++G++ E+  ++  M+  G KP+V+ Y+++I+G C AG ++EA+KL + M+ +  K
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             P+  TY+ L+N  CK S +  ++ L   M   G  PD++T NI L             
Sbjct: 544 --PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQG----------- 590

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI---- 655
                     LF+ +RT+   ++   + +     + ST+  ++  LC+ K    A+    
Sbjct: 591 ----------LFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640

Query: 656 NKCWSNL 662
           N C  +L
Sbjct: 641 NLCLMDL 647



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 241/507 (47%), Gaps = 10/507 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ S++  Y +SG  K     L +MR +       ++  +     K     EA ++F +M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIKTVC 203
                 KR +K   +    ++Q      AL   + +++    N I P+   F+++I    
Sbjct: 328 T-----KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G VD A+ +F +M  +   P+  TY  ++  LCK  R+++A+L  ++M  +G  P  +
Sbjct: 383 NQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N LI+GLC   +  RA +L+  M  +G   N + +N++I   C +G + ++  L + M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V     PN +TY T+ING    G+  +  ++L  M       N   YSTLI+G  K  + 
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           EDA+ L+K+M   G  P+ + Y+ ++ GL +  +   A+E+   +  +G      TY+ +
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  ++     A+++++++   +       ++++I  L + G+  EA+ ++    S G 
Sbjct: 623 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISH 562
            P+   Y  M   +   G +EE  +LF   L +E      D    N ++  L ++  I+ 
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLF---LSMEDNGCTVDSGMLNFIVRELLQRGEITR 739

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +   L+ + ++    +  T ++F+  L
Sbjct: 740 AGTYLSMIDEKHFSLEASTASLFIDLL 766


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 140/426 (32%), Positives = 232/426 (54%), Gaps = 8/426 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ + +N ++   C  G +D A +L  EMPV   EPD YTY TL+ GLC   R   A+ +
Sbjct: 124 PDVMAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAV 180

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LDEM    C P  VT+ +L+   CK     +A KL+D M  KGC P+ VTYN +++G+C 
Sbjct: 181 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 240

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G +D A+  L  + +  C PN V+Y  ++ GL    R  D   ++  M ++    N   
Sbjct: 241 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 300

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ LIS L ++G  E A+++ +Q+ + GC PN++ Y+ L+   C+  K D+A   L  M+
Sbjct: 301 FNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 360

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + GC  +  +Y++L+     SG+   AVE+   +    C    + Y+ +I GL + GK +
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 420

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  +  +M+S+G +PD++ YS++  GLC    +E+A++ F ++   +   +P+   YN 
Sbjct: 421 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ--DMGIRPNTVLYNA 478

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK-EKLEAPQDGTDFLNELAI 608
           ++  LCK+     +IDL   M+  GC P+  T  I +  L  E L   ++  D L+EL  
Sbjct: 479 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL--IKEARDLLDELCS 536

Query: 609 RLFKRQ 614
           R   R+
Sbjct: 537 RGVVRK 542



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 209/393 (53%), Gaps = 8/393 (2%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
            M + P+  T+N +I+ +C  G   NA+ +  EM  R C PD+ TY  L++  CK +   
Sbjct: 151 EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 210

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +A+ LLDEM+  GC P  VT+NV++NG+C+ G +  A + + N+   GC PN V+YN ++
Sbjct: 211 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 270

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLC     + A  L+  M    C PN VT+  +I+ L + G       VL  + +    
Sbjct: 271 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 330

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            N   Y+ L+    K+ K + AM     M+ +GC P+ V Y+ L+  LCR G+ D A E+
Sbjct: 331 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 390

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L ++ + GCA    +Y++++ G  ++GK  +A+E+  +M       + + YS +  GLC 
Sbjct: 391 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 450

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQ 541
           + ++ +A   + ++   G +P+ V Y+++I GLC       A+ LF  M+   C+     
Sbjct: 451 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM----- 505

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           P+  TY IL+  L  +  I  + DLL+ +  RG
Sbjct: 506 PNESTYTILIEGLAYEGLIKEARDLLDELCSRG 538



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 209/432 (48%), Gaps = 26/432 (6%)

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
           C PD+  Y  ++ G C   +LD A  L+ EM V+   P   T+N LI GLC  G    A 
Sbjct: 122 CGPDVMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANAL 178

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
            ++D M  + C+P+ VTY  L+   C +    +A+ LLD M    C P+ VTY  ++NG+
Sbjct: 179 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 238

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            + GR  D    L ++       N   Y+ ++ GL    + EDA +L  +M +KGC PN 
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V ++ LI  LCR G  + A E+L ++   GC  N+ +Y+ L+  F +  K  KA+     
Sbjct: 299 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 358

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M    C  + V Y+ L+  LC  G++  A  +  Q+  +GC P +++Y+++I GL  AG 
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
            +EAL+L NEM+      QPD+ TY+ +   LC++  I  +I     + D G  P+ V  
Sbjct: 419 TKEALELLNEMV--SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV-- 474

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                                N + + L KR+ T     +   M+     P  ST+  ++
Sbjct: 475 -------------------LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515

Query: 643 QELCRPKRIQAA 654
           + L     I+ A
Sbjct: 516 EGLAYEGLIKEA 527



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 211/385 (54%), Gaps = 4/385 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI+     G   +   VL  M R + V    ++  + +A  K    ++A++L   M
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D+  C   + ++N V+N I QEG    A+EF   + N       PNT+++N+V+K +C 
Sbjct: 220 RDK-GCTPDIVTYNVVVNGICQEGRVDDAIEF---LKNLPSYGCEPNTVSYNIVLKGLCT 275

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               ++A +L  EM  + C P++ T+  L+  LC++  ++ A+ +L+++   GC P  ++
Sbjct: 276 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 335

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++  CK  ++ +A   +D M  +GC P+ V+YNTL+  LC  G +D AV LL ++ 
Sbjct: 336 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 395

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C P  ++Y T+I+GL K G+  +   +L  M  +    +   YST+ +GL +E + E
Sbjct: 396 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 455

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA++ + ++ + G +PNTV+Y+A+I GLC+  +   A ++   MI NGC  N  TY+ L+
Sbjct: 456 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 515

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCV 469
           +G    G   +A ++  ++     V
Sbjct: 516 EGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/419 (29%), Positives = 202/419 (48%), Gaps = 35/419 (8%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L +   LDEA+ L+   +     P   T   LI  L  +G    A ++     L  C P+
Sbjct: 75  LVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRV-----LAACGPD 125

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            + YN ++ G C  G LD A  L+  M      P+  TY T+I GL   GR  +   VL 
Sbjct: 126 VMAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLD 182

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M  R+   +   Y+ L+    K    + AMKL  +M +KGC P+ V Y+ +++G+C+ G
Sbjct: 183 EMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG 242

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + D+A E L  + + GC  N  +Y+ ++KG   + +   A E+  +M +  C  N V ++
Sbjct: 243 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 302

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +LI  LC  G +  A  V  Q+   GC P+ ++Y+ ++H  C    +++A+   + M+  
Sbjct: 303 MLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV-- 360

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                PD+ +YN LL ALC+   +  +++LL+ + D+GC P L++ N  +          
Sbjct: 361 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI---------- 410

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            DG          L K  +T    +++  M+ K L P   T+  +   LCR  RI+ AI
Sbjct: 411 -DG----------LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 458


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 242/460 (52%), Gaps = 24/460 (5%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P  +TFN ++  +C    + +A++LF EM     EPD+ TY T+++GLCK      
Sbjct: 4   LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ LL +M+  GC P  V +N +I+ LCK+  +  A      M  +G  P+  TY++++H
Sbjct: 64  ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C  G +++A SL  +MV    +PN+VT+  +I+GL K     +   V  +M E+    
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + Y Y+ L+ G     + ++A KL+  M  KGC PN   Y+ LI+G C+ G+ DEA+ +L
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM +     + FTYS+LM+GF + G+  +A E+ K+M     + N + YS+++ GLC+ 
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L EA  +   M     +P++  Y+ +I G+C  G +E A +LF+ +       QP V 
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFV--KGIQPTVV 361

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           TY ++++ L K    + + +L   M   GC P+  T N+ +       + P         
Sbjct: 362 TYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPN-------- 413

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            A+RL            +E M+ K  S  +ST+ R++ +L
Sbjct: 414 -AVRL------------IEEMVGKGFSADSSTF-RMLSDL 439



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 207/394 (52%), Gaps = 8/394 (2%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A++L   M +E  CK  V ++N++++ + ++ L   A++F++ +V      I P+  T++
Sbjct: 64  ALQLLKKM-EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKE---GIPPDVFTYS 119

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            ++   C LG V+ A  LF++M  RN  P+  T+  L+DGLCK+  + EA L+ + M   
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P   T+N L++G C   ++  A KL + M  KGC PN  +YN LI+G C  G +D+A
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             LL  M      P+  TY T++ G  ++GR  +   +L  M       N   YS ++ G
Sbjct: 240 KGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDG 299

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K G  ++A +L K M E   +PN  +Y+ LI+G+C  GK + A E+   +   G    
Sbjct: 300 LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPT 359

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY+ ++ G  + G  ++A E++++MA N C+ N   Y+V+I G   +G    A  +  
Sbjct: 360 VVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIE 419

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +M+ +G   D    SS    L +  S +E +  F
Sbjct: 420 EMVGKGFSAD----SSTFRMLSDLESSDEIISQF 449



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 207/401 (51%), Gaps = 4/401 (0%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + +A++LF  MV   H +  V ++++++N + + G    AL+    +   +     PN +
Sbjct: 26  IMDAVKLFDEMVKMGH-EPDVITYSTIINGLCKMGNTTMALQLLKKM---EEKGCKPNVV 81

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N +I ++C+  LV  A+  F EM      PD++TY +++ G C   R++EA  L  +M
Sbjct: 82  AYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQM 141

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  VTF +LI+GLCK   +  A  + + M  KG  P+  TYN L+ G C +  +
Sbjct: 142 VERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQM 201

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A  L + M    C PN  +Y  +ING  K GR  +   +L  M  +    + + YSTL
Sbjct: 202 DEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTL 261

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + G  + G+ ++A +L K+M   G  PN + YS ++DGLC+ G  DEA E+L  M  +  
Sbjct: 262 MRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKI 321

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N F Y+ L++G    GK   A E++ ++         V Y+V+I GL + G   EA  
Sbjct: 322 EPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACE 381

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           ++ +M   GC P+   Y+ +I G    G    A++L  EM+
Sbjct: 382 LFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMV 422



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 191/377 (50%), Gaps = 26/377 (6%)

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           MF  G  P  VT+NTL+ GLC K  +  AV L D MV     P+ +TY TIINGL K+G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                ++L  MEE+    N   Y+T+I  L K+    +AM  + +M+++G  P+   YS+
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           ++ G C +G+ +EA  +  +M+      N  T++ L+ G  +     +A  +++ M +  
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              +   Y+ L+ G C   ++ EA+ ++  M  +GC P+V +Y+ +I+G C +G ++EA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 528 KLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            L  EM     KS  PD+FTY+ L+   C+      + +LL  M   G  P+L+T +I L
Sbjct: 241 GLLAEM---SHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                      DG          L K       F++++ M +  + P    +  +++ +C
Sbjct: 298 -----------DG----------LCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMC 336

Query: 647 RPKRIQAAINKCWSNLY 663
              +++AA  + +SNL+
Sbjct: 337 TFGKLEAA-RELFSNLF 352


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 158/538 (29%), Positives = 277/538 (51%), Gaps = 16/538 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   Y +   ++ A ++F+ M  +  C+R   ++  +++ +        A++ +  
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLK-GCRRNEVAYTHLIHGLCVARRIDEAMDLF-- 311

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
            V  K     P   T+ ++IK++C       A+ L +EM     +P+I+TY  L+D LC 
Sbjct: 312 -VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           + + ++A  LL +M   G  P  +T+N LING CK G +  A  +V+ M  +   PN  T
Sbjct: 371 QCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN LI G C K N+ KA+ +L++M+  K +P+ VTY ++I+G  + G      R+L  M 
Sbjct: 431 YNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R    +++ Y+++I  L K  + E+A  L+  + +KG  PN V+Y+ALIDG C+ GK D
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA  +L +M++  C  N+ T+++L+ G    GK  +A  + + M K          ++LI
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           H L +DG    A   + QMLS G KPD   Y++ I   C  G + +A  +  +M   E  
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR--ENG 667

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE---AP 596
             PD+FTY+ L+         + + D+L  M D GC+P   T   FL+ +K  LE     
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT---FLSLIKHLLEMKYGK 724

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           Q G++   EL   +          +++E M++  ++P   ++E+++  +C    ++ A
Sbjct: 725 QKGSE--PELCA-MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779



 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 154/484 (31%), Positives = 251/484 (51%), Gaps = 12/484 (2%)

Query: 108 RMRREKRVVLEKSFIF-----IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN 162
           +M +++R  L+   I      +  +  +  LV+E  +++  M+++  C   + ++N ++N
Sbjct: 168 KMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCP-NIYTYNKMVN 226

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
              + G    A ++ + IV A    + P+  T+  +I   C+   +D+A ++F EMP++ 
Sbjct: 227 GYCKLGNVEEANQYVSKIVEA---GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
           C  +   Y  L+ GLC   R+DEA+ L  +M+ D CFPT  T+ VLI  LC +     A 
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
            LV  M   G  PN  TY  LI  LC +   +KA  LL +M+    MPN +TY  +ING 
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K G   D   V+  ME RK   N   Y+ LI G  K      AM +  +M+E+   P+ 
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDV 462

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V Y++LIDG CR G  D A  +L  M + G   + +TY+S++    +S +  +A +++  
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           + +     N V Y+ LI G C+ GK+ EA ++  +MLS+ C P+ + ++++IHGLC  G 
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           ++EA  L  +M+ +    QP V T  IL++ L K  +  H+      M+  G  PD  T 
Sbjct: 583 LKEATLLEEKMVKI--GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640

Query: 583 NIFL 586
             F+
Sbjct: 641 TTFI 644



 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/477 (32%), Positives = 235/477 (49%), Gaps = 23/477 (4%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N ++ ++ R GLVD   Q++ EM      P+IYTY  +++G CK   ++EA   + ++ 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P   T+  LI G C+  +L  A K+ + M LKGC  NEV Y  LIHGLC+   +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A+ L  +M   +C P   TY  +I  L    R  +   ++  MEE     N + Y+ LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L  + K E A +L  QM+EKG  PN + Y+ALI+G C+ G  ++A +++  M +   +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  TY+ L+KG+ +S   HKA+ +   M +   + + V Y+ LI G C  G    A  +
Sbjct: 426 PNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNA 553
            + M  RG  PD   Y+SMI  LC +  VEEA  LF+    LE K   P+V  Y  L++ 
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS---LEQKGVNPNVVMYTALIDG 541

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL------------TALKEKLE----APQ 597
            CK   +  +  +L  M+ + C P+ +T N  +            T L+EK+      P 
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             TD +  L  RL K       +   + ML     P   T+   +Q  CR  R+  A
Sbjct: 602 VSTDTI--LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 233/471 (49%), Gaps = 23/471 (4%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++N+++N   + G+   A++    + + K   + PNT T+N +IK  C+   V  A+ 
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRK---LSPNTRTYNELIKGYCKSN-VHKAMG 448

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  +M  R   PD+ TY +L+DG C+    D A  LL  M   G  P   T+  +I+ LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K+  +  A  L D++  KG  PN V Y  LI G C  G +D+A  +L++M++  C+PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           T+  +I+GL   G+  +   +   M +          + LI  L K+G  + A   ++QM
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +  G KP+   Y+  I   CR G+  +AE+++ +M  NG + + FTYSSL+KG+ + G+ 
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE--DGKLREAR----------------MVW 495
           + A ++ K M    C  ++  +  LI  L E   GK + +                  + 
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M+     P+  +Y  +I G+C  G++  A K+F+ M   E  S P    +N LL+  C
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS-PSELVFNALLSCCC 807

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           K    + +  +++ M+  G  P L +C + +  L +K E  +  + F N L
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/535 (26%), Positives = 248/535 (46%), Gaps = 33/535 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y   G  +    V+  M   K     +++  + K Y K++ V +A+ + + M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKM 453

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E      V ++NS+++   + G +  A    + ++N +   ++P+  T+  +I ++C+
Sbjct: 454 L-ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS-LMNDR--GLVPDQWTYTSMIDSLCK 509

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V+ A  LF  +  +   P++  Y  L+DG CK  ++DEA L+L++M    C P  +T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI+GLC +G+L  A  L + M   G  P   T   LIH L   G+ D A S   +M+
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +S   P+  TY T I    + GR +D   ++  M E     + + YS+LI G    G+  
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLC--RVGKPDEAE----------------EILF 426
            A  + K+M + GC+P+   + +LI  L   + GK   +E                E+L 
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY-NEVCYSVLIHGLCED 485
           +M+ +    NA +Y  L+ G  E G    A +++  M +N  +  +E+ ++ L+   C+ 
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            K  EA  V   M+  G  P + +   +I GL   G  E    +F  +  L+     D  
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL--LQCGYYEDEL 867

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            + I+++ + KQ  +    +L N M   GC     T ++        +E P D T
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL-------IEGPPDST 915


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 158/538 (29%), Positives = 275/538 (51%), Gaps = 42/538 (7%)

Query: 135 EEAIRLFHTMVDEFH---CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           E A  L+  ++ E      K + ++F+ ++    + G+  +A+E +  +   +  +  P+
Sbjct: 106 ENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLM---RDFDCKPD 162

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
              FNL++  + R      A+ ++ +M   N  PD+ TY  L+ GLCK  +  +A++L D
Sbjct: 163 LFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFD 222

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM   G  P  + ++++++GLC+  ++  A +L   M   GC  + +TYN L++G C  G
Sbjct: 223 EMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSG 282

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            LD A +LL  +     +   + YG +INGL +  R  +       M       +  +Y+
Sbjct: 283 YLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYT 342

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +I GL +EG+  +A+ L  +M E+G +P+T+ Y+ALI G C +G  DEAE +  E+  +
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKH 402

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
            C  N  TYS L+ G  ++G  +KA  I+K+M K  C+ + V ++ LI+GLC+  +L EA
Sbjct: 403 DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEA 462

Query: 492 RMVWTQM-----------LSRGCKP--DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           R+++ QM           LS+G     D+ +   M+  LC +G + +A KL  ++  ++ 
Sbjct: 463 RLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQL--VDS 520

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PD+ TYNIL+N  CK  NI+ +  L   M  +G  PD VT    +           D
Sbjct: 521 GVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLI-----------D 569

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           G          L++  R     +I E M++K   P++ST++ ++   CR   I  A++
Sbjct: 570 G----------LYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALS 617



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 253/511 (49%), Gaps = 56/511 (10%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           VL  ++     +  ++F  + +AY +A + E+A+  F  M D F CK  + +FN +L+ +
Sbjct: 115 VLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD-FDCKPDLFAFNLILHFL 173

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
           +++  +  AL  YN ++     N+ P+ +T+ ++I  +C+     +A+ LF EM  R   
Sbjct: 174 VRKEAFLLALAVYNQMLKC---NLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGIL 230

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P+   Y  ++ GLC+  ++ +A  L  +M+  GC    +T+NVL+NG CK+G L  A  L
Sbjct: 231 PNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTL 290

Query: 285 V-----DNMFLK----GCL--------------------------PNEVTYNTLIHGLCL 309
           +     D   L     GCL                          P+ + Y  +I GL  
Sbjct: 291 LQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQ 350

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G + +A++LL  M      P+ + Y  +I G   +G   +   + + + +     N + 
Sbjct: 351 EGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHT 410

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM- 428
           YS LI G+ K G    A  ++K+M + GC P+ V +++LI+GLC+  + +EA  + ++M 
Sbjct: 411 YSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQME 470

Query: 429 ----------INNGCAANAFTYSSL---MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
                     ++ G     F  +SL   M+   ESG   KA ++   +  +  + +   Y
Sbjct: 471 IVRKPSLFLRLSQG-TDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTY 529

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           ++LI+G C+ G +  A  ++ +M  +G  PD V Y ++I GL  AG  E+AL++F +M+ 
Sbjct: 530 NILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMV- 588

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            +    P+  TY  ++   C+++NIS ++ +
Sbjct: 589 -KKGCVPESSTYKTIMTWSCRENNISLALSV 618



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 179/356 (50%), Gaps = 8/356 (2%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L KEN  +    +L E++      +   F+VLI    + G   +A +    M    C P+
Sbjct: 103 LIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPD 162

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              +N ++H L  K     A+++ ++M+     P+ VTYG +I+GL K  +  D   +  
Sbjct: 163 LFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFD 222

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +R    N+ IYS ++SGL +  K  DA +L+ +M   GC  + + Y+ L++G C+ G
Sbjct: 223 EMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSG 282

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
             D+A  +L  +  +G       Y  L+ G F + +  +A   ++ M + N   + + Y+
Sbjct: 283 YLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYT 342

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           ++I GL ++G++ EA  +  +M  RG +PD + Y+++I G C+ G ++EA     E L L
Sbjct: 343 IMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEA-----ESLRL 397

Query: 537 EPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           E       P+  TY+IL+  +CK   I+ +  +   M   GC P +VT N  +  L
Sbjct: 398 EISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGL 453



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 176/397 (44%), Gaps = 57/397 (14%)

Query: 35  SHRFFSVRSAVSSNKQMET-EPQGNAKSEQPFSDEIFNSTPKL--GSYQLGDSTFYSLIQ 91
           + R FS   A   N+ + T     N   +  + D+ F     L    + LG   +  LI 
Sbjct: 252 AQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLIN 311

Query: 92  HYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK 151
               +  ++   M   +M RE        +  + +   +   V EA+ L   M +     
Sbjct: 312 GLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRP 371

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
            T+  +N+++      G    A      I  +KH +  PN  T++++I  +C+ GL++ A
Sbjct: 372 DTI-CYNALIKGFCDMGYLDEAESLRLEI--SKH-DCFPNNHTYSILICGMCKNGLINKA 427

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV--------------DG 257
             +F+EM    C P + T+ +L++GLCK NRL+EA LL  +M++              D 
Sbjct: 428 QHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDK 487

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
            F    +  V++  LC++G + +A KL+  +   G LP+  TYN LI+G C  GN++ A 
Sbjct: 488 VFDI-ASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAF 546

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            L   M     MP+ VTYGT+I+GL + GR                              
Sbjct: 547 KLFKEMQLKGHMPDSVTYGTLIDGLYRAGR------------------------------ 576

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
                 EDA+++++QM++KGC P +  Y  ++   CR
Sbjct: 577 -----NEDALEIFEQMVKKGCVPESSTYKTIMTWSCR 608


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 151/529 (28%), Positives = 280/529 (52%), Gaps = 9/529 (1%)

Query: 74   PKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHL 133
            P LG   LG+ T+ +L+  + ++G       +L  M++ + +    ++  +    GKA  
Sbjct: 519  PSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGR 578

Query: 134  VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
            ++EA+ L   M ++  C+ +V +++S++    +      +L  ++ +V       + +  
Sbjct: 579  LDEAVSLLREM-EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRK---GCVADVS 634

Query: 194  TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            T++LVI  +C+   VD A+ +F  M     EP +  Y TL+  L K+ ++D A+ + +E+
Sbjct: 635  TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694

Query: 254  QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
            Q     P    +N+++NGL K+  +  A KLVD+M  +  LP+  TY +L+ GL   G L
Sbjct: 695  QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754

Query: 314  DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            ++A ++  +M      P+ V Y ++++ L K G+      +  +M +++   +   YS+L
Sbjct: 755  EEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL 814

Query: 374  ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
            I  L KEG+ E+A   ++  + KGC PN  VYS+LID   + G  D A E+  EM    C
Sbjct: 815  IDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQC 874

Query: 434  AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
              N  TY++L+ G  ++G+ + A ++ ++M K  CV + V Y++LI G+ + G + EA  
Sbjct: 875  PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAES 934

Query: 494  VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
             + +M  +G  PDV+ ++S+I  L     + EA +LF+ M   E    P V TYN+L++ 
Sbjct: 935  YFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSM--EEEGYNPSVVTYNVLIDI 992

Query: 554  LCKQSNISHSIDLLNSMMDRGCDPDLVTCNI---FLTALKEKLEAPQDG 599
            L +   +  +  + + M  +GC PD +T  I    L+  +++  A ++G
Sbjct: 993  LGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHALEEG 1041



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 157/533 (29%), Positives = 262/533 (49%), Gaps = 31/533 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + +LI     +G+      +   M+    V   +++  +    GKA    EA +LFH +
Sbjct: 394 AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV------------NAKHMNILPNT 192
            ++      V ++N++++V+ + G   + L     +V            NA H   +   
Sbjct: 454 KEQGAVP-DVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGA 512

Query: 193 ----------------LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
                           +T+N ++      G VD A++L   M    C P + TY TL+DG
Sbjct: 513 DRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDG 572

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L K  RLDEAV LL EM+  GC P+ VT++ L+    K  +   +  L D M  KGC+ +
Sbjct: 573 LGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVAD 632

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             TY+ +I+ LC   ++D+A+ +  RM      P    Y T+++ LVK  +     ++  
Sbjct: 633 VSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFN 692

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            ++E     + ++Y+ +++GL K  + ++A KL   M  +   P+   Y++L+DGL + G
Sbjct: 693 ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + +EA  +  +M   G   +   Y+SLM    + GK   A+ I++ MAK  CV + V YS
Sbjct: 753 RLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYS 812

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            LI  L ++G++ EA   +   +S+GC P+V  YSS+I      G V+ AL+LF EM   
Sbjct: 813 SLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEM--Q 870

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             +  P++ TYN LL+ L K   ++ +  LL  M   GC PDLVT NI +  +
Sbjct: 871 RRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGV 923



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 159/582 (27%), Positives = 271/582 (46%), Gaps = 51/582 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + K    A   +  +++   M  E H + ++    S+L           ALE +N 
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGH-RISMHLLTSLLRTFGSTNNVSGALEIFNQ 242

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   K     P+T  +N V++ + + G   +A+ +F ++     +PD  T+   +    +
Sbjct: 243 M---KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNR 299

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             RLD A   + EM   G  P   TF VLI+ L K+G +  A K  + M    C PN VT
Sbjct: 300 SGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVT 359

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y TL++GL   G L++A  +   M  + C P+ + Y T+I+GL K G A     +   M+
Sbjct: 360 YTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMK 419

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R    N   Y+ +IS L K G+  +A +L+  + E+G  P+   Y+ LID L + G+ D
Sbjct: 420 DRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMD 479

Query: 420 EAEEILFEMINNGCA------ANA-------------------------FTYSSLMKGFF 448
           +   I+ EM+  G        +NA                          TY++LM  F 
Sbjct: 480 KVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFI 539

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            +G   +AV++ + M K+ C+   V Y+ L+ GL + G+L EA  +  +M  +GC+P VV
Sbjct: 540 HNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVV 599

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            YSS++         EE+L LF+EM  +      DV TY++++N LCK  ++  ++D+  
Sbjct: 600 TYSSLMASFYKRDQEEESLSLFDEM--VRKGCVADVSTYSLVINCLCKSDDVDQALDVFG 657

Query: 569 SMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAI------------RLFKRQ 614
            M + G +P L      L++L   EK++      + L E ++             L K  
Sbjct: 658 RMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSN 717

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           R     K+V+ M  + + P   T+  ++  L +  R++ A N
Sbjct: 718 RVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFN 759



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/418 (24%), Positives = 190/418 (45%), Gaps = 22/418 (5%)

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           Q DG   T  T+ ++I  L    E     +++  M+ +G   +     +L+       N+
Sbjct: 174 QQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNV 233

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A+ + ++M +  C P+   Y  ++  LVK G       V   + + +   +   +   
Sbjct: 234 SGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIF 293

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +    + G+ + A +  ++M++ G  P    ++ LID L + G  DEA +    M N  C
Sbjct: 294 VHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           + N  TY++L+ G  ++G+  +A E++ +M +NNC  + + Y+ LI GL + G+   A  
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M  RG  P++  Y+ MI  L  AG   EA +LF+++   E  + PDVFTYN L++ 
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL--KEQGAVPDVFTYNTLIDV 471

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNI----------FLTALKEKLEAPQDGTDFL 603
           L K   +   + ++  M+++G +     C I           +      +E P  G   L
Sbjct: 472 LGKGGQMDKVLAIIKEMVEKGGE-----CIISRDSNAGHEGTIEGADRTVEYPSLGFKSL 526

Query: 604 NELAIRLFKRQRTSGG-----FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            E+            G      K++EVM +    P   T+  +V  L +  R+  A++
Sbjct: 527 GEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVS 584


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 144/436 (33%), Positives = 221/436 (50%), Gaps = 37/436 (8%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +PN +T+++VI  +CR G VD A++L R M  +   PD Y Y TL+DG C++ R  E   
Sbjct: 264 IPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKS 323

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +LDEM   G  P  V +  LING  K  ++G A ++ + MF +    N  TY  LIHGLC
Sbjct: 324 MLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLC 383

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTY--------------------------------- 335
             G+L+KA  L   M      P+  TY                                 
Sbjct: 384 KIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAY 443

Query: 336 --GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
             G I+NGL   G       +   M       N  IY+T++ GL KEG+ E+A+K+   M
Sbjct: 444 MCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVM 503

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            ++G  P+   Y+ +I G C+ GK +E +  L EMI  G   N +TY + + G+  +G+ 
Sbjct: 504 KDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEM 563

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A   + +M  +    N+V  + LI G C+DG   +A   +  ML +G  PDV  +S +
Sbjct: 564 QAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVL 623

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           IHGL   G ++EA+ +F+E+  L+    PDVFTY  L++ LCK+ ++  + +L + M  +
Sbjct: 624 IHGLSKNGKLQEAMGVFSEL--LDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKK 681

Query: 574 GCDPDLVTCNIFLTAL 589
           G +P++VT N  +  L
Sbjct: 682 GINPNIVTYNALINGL 697



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 226/479 (47%), Gaps = 51/479 (10%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           PD+YTY  L++  C+  +++E   +L +M+  GC P  VT++V+I GLC+ G++  A +L
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
             +M  KG LP+   Y TLI G C +    +  S+LD M      P+ V Y  +ING VK
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
                   +V   M  RK  +N + Y  LI GL K G  E A  L+ +M   G KP+   
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 405 YS-----------------------------------ALIDGLCRVGKPDEAEEILFEMI 429
           Y+                                   A+++GLC  G    A E+  EMI
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   N   Y++++KG  + G+  +A++I   M       +  CY+ +I G C+ GK+ 
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           E +    +M+++G KP+V  Y + IHG C AG ++ A + F EM  L+    P+      
Sbjct: 530 EGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEM--LDSGIAPNDVICTD 587

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KL-EAPQDGTDFLNE- 605
           L++  CK  N + +      M+D+G  PD+ T ++ +  L +  KL EA    ++ L++ 
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647

Query: 606 ----------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                     L   L K       F++ + M +K ++P   T+  ++  LC+   I  A
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKA 706



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 230/504 (45%), Gaps = 11/504 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + +LI  +    D      V   M   K  +   ++  +     K   +E+A  LF  M
Sbjct: 339 AYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEM 398

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLY--HRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
                 K  ++++N ++     EG Y      + Y  ++  K  N+  N      ++  +
Sbjct: 399 T-MMGIKPDIQTYNCLI-----EGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGL 452

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C  G +  A +LF+EM     +P+I  Y T++ GL KE R +EA+ +L  M+  G  P  
Sbjct: 453 CHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDV 512

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             +N +I G CK G++      +  M  KG  PN  TY   IHG C  G +  A      
Sbjct: 513 FCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIE 572

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+ S   PN+V    +I+G  K G           M ++    +   +S LI GL K GK
Sbjct: 573 MLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGK 632

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++AM ++ ++++KG  P+   Y++LI  LC+ G    A E+  +M   G   N  TY++
Sbjct: 633 LQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNA 692

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G  + G+  KA E++  + +     N V YS +I G C+   L EA  ++  M   G
Sbjct: 693 LINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVG 752

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             PD   Y ++I G C AG+ E+AL LF  M+     S P    +N L++   K   +  
Sbjct: 753 VPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP---AFNALIDGFFKLGKLIE 809

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFL 586
           +  L+  M+D    P+ VT  I +
Sbjct: 810 AYQLVEDMVDNHITPNHVTYTILI 833



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 143/473 (30%), Positives = 220/473 (46%), Gaps = 62/473 (13%)

Query: 188  ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
            +LP+  T +++I  + + G +  A+ +F E+  +   PD++TY +L+  LCKE  L  A 
Sbjct: 613  VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAF 672

Query: 248  LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
             L D+M   G  P  VT+N LINGLCK GE+ +A +L D +  KG   N VTY+T+I G 
Sbjct: 673  ELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGY 732

Query: 308  CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
            C   NL +A  L   M      P+   Y  +I+G  K G       + + M E     + 
Sbjct: 733  CKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-AST 791

Query: 368  YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
              ++ LI G FK GK  +A +L + M++    PN V Y+ LI+  C VG   EAE++  E
Sbjct: 792  PAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFME 851

Query: 428  MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
            M       N  TY+SL+ G                       YN +            G+
Sbjct: 852  MQKRNVMPNVLTYTSLLHG-----------------------YNRI------------GR 876

Query: 488  LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
              E   ++ +M++RG KPD +A+S M+      G+  +ALKL ++ML        +++T 
Sbjct: 877  RSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYT- 935

Query: 548  NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI----------------------- 584
             IL++ALCK +N+S  + +L+ +  +G    L TC                         
Sbjct: 936  -ILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVR 994

Query: 585  -FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
             FL  L+  +     G      L+I L  R+  SG  + ++V L K LS  TS
Sbjct: 995  SFLNLLEFSVRNGNRGKSNGEMLSIILEGRKSLSGDIQTLDVDLFKELSSSTS 1047



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 160/321 (49%), Gaps = 8/321 (2%)

Query: 150 CKRTVK----SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           CK+ +     ++N+++N + + G   +A E ++ I       +  N++T++ +I   C+ 
Sbjct: 679 CKKGINPNIVTYNALINGLCKLGEIAKARELFDGI---PEKGLARNSVTYSTIIAGYCKS 735

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
             +  A QLF  M +    PD + YC L+DG CK    ++A+ L   M  +G   TP  F
Sbjct: 736 ANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTP-AF 794

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N LI+G  K G+L  A +LV++M      PN VTY  LI   C  GN+ +A  L   M  
Sbjct: 795 NALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQK 854

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
              MPN +TY ++++G  ++GR  +   +   M  R    ++  +S ++    KEG    
Sbjct: 855 RNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIK 914

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A+KL   M+ +G      +Y+ LID LC+     E  ++L E+   G   +  T  +L+ 
Sbjct: 915 ALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVC 974

Query: 446 GFFESGKGHKAVEIWKDMAKN 466
            F  +G+  +A+ + + M ++
Sbjct: 975 CFHRAGRTDEALRVLESMVRS 995



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 143/293 (48%), Gaps = 10/293 (3%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IF 125
           E+F+  P+ G  +    T+ ++I  Y  S +      + + M+     V   SF++  + 
Sbjct: 708 ELFDGIPEKGLAR-NSVTYSTIIAGYCKSANLTEAFQLFHGMKLVG--VPPDSFVYCALI 764

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
               KA   E+A+ LF  MV+E     +  +FN++++   + G   + +E Y  + +   
Sbjct: 765 DGCCKAGNTEKALSLFLGMVEEGIA--STPAFNALIDGFFKLG---KLIEAYQLVEDMVD 819

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
            +I PN +T+ ++I+  C +G +  A QLF EM  RN  P++ TY +L+ G  +  R  E
Sbjct: 820 NHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSE 879

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
              L DEM   G  P  + ++V+++   K G   +A KLVD+M  +G    +  Y  LI 
Sbjct: 880 MFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILID 939

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            LC   NL + + +LD +       +  T GT++    + GR  +  RVL SM
Sbjct: 940 ALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 289/614 (47%), Gaps = 47/614 (7%)

Query: 58  NAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREK---R 114
           N +  Q F D I ++ P   +++    +F ++I     S      + V+ RM R+    R
Sbjct: 214 NLQLGQRFIDSITSNCP---NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSR 270

Query: 115 VVLEKSFIFIF--------------KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSV 160
           V + +S +  +              + Y +A  + E    F  +  +  C  ++ + NS+
Sbjct: 271 VEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCV-SINACNSL 329

Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           L  +++ G    A E Y  +V +    +  N  T N++I  +C+   ++N      +M  
Sbjct: 330 LGGLVKVGWVDLAWEIYQEVVRS---GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 386

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +   PD+ TY TL++  C++  L+EA  L+D M   G  P   T+N +INGLCK G+  R
Sbjct: 387 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 446

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A  ++D M   G  P+  TYN L+   C   N+  A  + D M +   +P+ V++  +I 
Sbjct: 447 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 506

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
            L K G      +    M+      +  IY+ LI G  + G   +A+K+  +M+E+GC  
Sbjct: 507 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXL 566

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + V Y+ +++GLC+     EA+E+  EM   G   + +T+++L+ G+ + G  +KAV ++
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           + M + N   + V Y+ LI G C+  ++ +   +W  M+SR   P+ ++Y  +I+G CN 
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 686

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           G V EA +L++EM  +E   +  + T N ++   C+  N   + + L++M+ +G  PD +
Sbjct: 687 GCVSEAFRLWDEM--VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 744

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
           T N  +                         K +     F +V  M    L P   T+  
Sbjct: 745 TYNTLING---------------------FIKEENMDRAFALVNKMENSGLLPDVITYNV 783

Query: 641 VVQELCRPKRIQAA 654
           ++    R  R+Q A
Sbjct: 784 ILNGFSRQGRMQEA 797



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 233/455 (51%), Gaps = 6/455 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  AY +  L+EEA  L  +M  +   K  V ++N+++N + + G Y RA    + ++  
Sbjct: 399 LINAYCRQGLLEEAFELMDSMSGK-GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML-- 455

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
             + + P+T T+N+++   CR   + +A ++F EMP +   PD+ ++  L+  L K   L
Sbjct: 456 -KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 514

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A+    +M+  G  P  V + +LI G C+NG +  A K+ D M  +GC  + VTYNT+
Sbjct: 515 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTI 574

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++GLC +  L +A  L   M      P+  T+ T+ING  K G       +   M +R  
Sbjct: 575 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL 634

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TLI G  K  + E   +LW  M+ +   PN + Y  LI+G C +G   EA  
Sbjct: 635 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 694

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EM+  G  A   T ++++KG+  +G   KA E   +M     V + + Y+ LI+G  
Sbjct: 695 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 754

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           ++  +  A  +  +M + G  PDV+ Y+ +++G    G ++EA  +  +M  +E    PD
Sbjct: 755 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM--IERGVNPD 812

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             TY  L+N    Q+N+  +  + + M+ RG  PD
Sbjct: 813 RSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 39/248 (15%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y K   + +A+ LF  M+   + K  V ++N++++   +     +  E +N 
Sbjct: 605 TFTTLINGYXKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE--------------- 224
           +++ +   I PN +++ ++I   C +G V  A +L+ EM  +  E               
Sbjct: 664 MISRR---IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 720

Query: 225 --------------------PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
                               PD  TY TL++G  KE  +D A  L+++M+  G  P  +T
Sbjct: 721 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 780

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NV++NG  + G +  A  ++  M  +G  P+  TY +LI+G   + NL +A  + D M+
Sbjct: 781 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 840

Query: 325 ASKCMPNE 332
               +P++
Sbjct: 841 QRGFVPDD 848


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 151/497 (30%), Positives = 259/497 (52%), Gaps = 6/497 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T  +++  Y   G+    E+ + ++ +    +   ++  +   Y +   V+ A  +F +M
Sbjct: 206 TLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSM 265

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++  C R   S+ ++++   +      AL+ ++ +      N  P   T+ ++I  +C+
Sbjct: 266 PNK-GCLRNEVSYTNLIHGFCEARRVDEALKLFSQM---HEDNCWPTVRTYTVIIFALCQ 321

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           LG    A+ +F+EM  ++C+P+++TY  L+  LC+++  D+A  +L+ M   G  P+ VT
Sbjct: 322 LGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVT 381

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+G CK G    A +++  M    C PN  TYN LI G C   N+ KA+SLL +M+
Sbjct: 382 YNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKML 441

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
             K  PN VTY  +I+G  K G      ++L  M E     +E+ YS  I  L K G  E
Sbjct: 442 ERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVE 501

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A  L++ + EKG K N V+YS LIDG C+VGK  +   +L +M++ GC  N+ TY+SL+
Sbjct: 502 EARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLI 561

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+ +     +A  +   M K +       Y++LI  L +D +  +A  ++ QMLS G  
Sbjct: 562 DGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSH 621

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PDV  Y++ IH  C+ G +++A  L  +M        PD   Y + ++A  +  +I  + 
Sbjct: 622 PDVFIYTAFIHAYCSHGRLKDAEVLICKMNA--KGIMPDTMLYTLFIDAYGRFGSIDGAF 679

Query: 565 DLLNSMMDRGCDPDLVT 581
            +L  M + GC+P   T
Sbjct: 680 GILKRMHEVGCEPSYYT 696



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/598 (26%), Positives = 276/598 (46%), Gaps = 45/598 (7%)

Query: 21  KMKTLSLTTIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQ 80
           +MK++ L  +    +   F++ + V+   ++     GN    + +  +I  +   L ++ 
Sbjct: 187 EMKSVYLEMLDDMVTPNIFTLNTMVNGYCKL-----GNVVEAELYVSKIVQAGLSLDTF- 240

Query: 81  LGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
               T+ SLI  Y  + +  +   +   M  +  +  E S+  +   + +A  V+EA++L
Sbjct: 241 ----TYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKL 296

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M  E +C  TV+++  ++  + Q G    AL  +  +   KH    PN  T+ ++I 
Sbjct: 297 FSQM-HEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTE-KHCQ--PNVHTYTVLIC 352

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
           ++C     D+A ++   M  +   P + TY  L+DG CK+     A+ +L  M+ + C P
Sbjct: 353 SLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSP 412

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T+N LI G C+   + +A  L+  M  +   PN VTYN LIHG C +G+L  A  LL
Sbjct: 413 NARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLL 472

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             M  S  +P+E TY   I+ L K G   +   +  S++E+    NE IYSTLI G  K 
Sbjct: 473 SLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKV 532

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK  D   L  +M+  GC PN++ Y++LIDG C+     EA  ++  MI       A TY
Sbjct: 533 GKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTY 592

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+    +  +  +A +++  M       +   Y+  IH  C  G+L++A ++  +M +
Sbjct: 593 TILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNA 652

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC----- 555
           +G  PD + Y+  I      GS++ A  +   M   E   +P  +TY+ L+  L      
Sbjct: 653 KGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRM--HEVGCEPSYYTYSCLIKHLSNAKPK 710

Query: 556 ------------------------KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                                   ++ +   ++DL   M + GC P+  T   F+T L
Sbjct: 711 EVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGL 768



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 146/461 (31%), Positives = 224/461 (48%), Gaps = 25/461 (5%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N+++  + R  ++D    ++ EM      P+I+T  T+++G CK   + EA L + ++ 
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G      T+  LI G C+N  +  A  +  +M  KGCL NEV+Y  LIHG C    +D
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A+ L  +M    C P   TY  II  L +LGR  +   +   M E+    N + Y+ LI
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L ++   +DA K+   M+EKG  P+ V Y+ALIDG C+ G    A EIL  M +N C+
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCS 411

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            NA TY+ L+ GF      HKA+ +   M +     N V Y++LIHG C++G L  A  +
Sbjct: 412 PNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKL 471

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
            + M   G  PD   YS  I  LC  G VEEA  LF  +   E   + +   Y+ L++  
Sbjct: 472 LSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESL--KEKGIKANEVIYSTLIDGY 529

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQDGTDFLNELAIRLFKR 613
           CK   +S    LL+ M+  GC P+ +T N  +    KEK                  FK 
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEK-----------------NFKE 572

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            R      +V++M+++ + P   T+  ++  L +      A
Sbjct: 573 ARL-----LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQA 608



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/535 (29%), Positives = 255/535 (47%), Gaps = 22/535 (4%)

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           +++E   ++  M+D+      + + N+++N   + G    A  + + IV A    +  +T
Sbjct: 184 MIDEMKSVYLEMLDDM-VTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQA---GLSLDT 239

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
            T+  +I   CR   VD A  +F  MP + C  +  +Y  L+ G C+  R+DEA+ L  +
Sbjct: 240 FTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQ 299

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M  D C+PT  T+ V+I  LC+ G    A  +   M  K C PN  TY  LI  LC   N
Sbjct: 300 MHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSN 359

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
            D A  +L+ M+    +P+ VTY  +I+G  K G +     +L  ME      N   Y+ 
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI G  +      AM L  +M+E+  +PN V Y+ LI G C+ G    A ++L  M  +G
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESG 479

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              + +TYS  +    + G   +A  +++ + +     NEV YS LI G C+ GK+ + R
Sbjct: 480 LVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGR 539

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +MLS GC P+ + Y+S+I G C   + +EA  L + M  ++   +P   TY IL++
Sbjct: 540 FLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIM--IKRDIEPAADTYTILID 597

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA------LKE------KLEAPQDGT 600
            L K      + D+ + M+  G  PD+     F+ A      LK+      K+ A     
Sbjct: 598 NLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMP 657

Query: 601 D-FLNELAIRLFKR-QRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL--CRPKRI 651
           D  L  L I  + R     G F I++ M +    P   T+  +++ L   +PK +
Sbjct: 658 DTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEV 712



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 129/535 (24%), Positives = 218/535 (40%), Gaps = 72/535 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y   G   S   +L  M         +++  +   + +   + +A+ L H M
Sbjct: 381 TYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM 440

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E   +  V ++N +++   +EG    A   Y  +       ++P+  T+++ I T+C+
Sbjct: 441 L-ERKLQPNVVTYNILIHGQCKEGDLGSA---YKLLSLMNESGLVPDEWTYSVFIDTLCK 496

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLV+ A  LF  +  +  + +   Y TL+DG CK  ++ +   LLD+M   GC P  +T
Sbjct: 497 RGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSIT 556

Query: 265 FNVLINGLCK-----------------------------------NGELGRAAKLVDNMF 289
           +N LI+G CK                                   + E  +A  + D M 
Sbjct: 557 YNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQML 616

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             G  P+   Y   IH  C  G L  A  L+ +M A   MP+ + Y   I+   + G ++
Sbjct: 617 STGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFG-SI 675

Query: 350 DGA-RVLMSMEERKFHVNEYIYSTLI-----------------------------SGLFK 379
           DGA  +L  M E     + Y YS LI                             S  ++
Sbjct: 676 DGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWR 735

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
               E  + L+ +M E GC PN   Y   I GLC+VG  + A  +   M   G + N   
Sbjct: 736 RVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDI 795

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+SL+    + G   +A+     M +N  + +     +L+ GL ++G   +A+ V+   L
Sbjct: 796 YNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFL 855

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
                 D + +  +I GL   G  ++   LF  M     +  P   TY++L+   
Sbjct: 856 QCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPK--TYSMLIEGF 908



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 151/307 (49%), Gaps = 27/307 (8%)

Query: 354 VLMSMEER----KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +L SM  R    KF +    Y+ L+  L +    ++   ++ +M++    PN    + ++
Sbjct: 152 MLRSMNRRVDAFKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMV 211

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           +G C++G   EAE  + +++  G + + FTY+SL+ G+  +     A  I+  M    C+
Sbjct: 212 NGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCL 271

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            NEV Y+ LIHG CE  ++ EA  +++QM    C P V  Y+ +I  LC  G   EAL +
Sbjct: 272 RNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNM 331

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F EM   E   QP+V TY +L+ +LC+ SN   +  +LN M+++G  P +VT N  +   
Sbjct: 332 FKEM--TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI--- 386

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                   DG            K+  ++   +I+ +M     SP   T+  ++   CR K
Sbjct: 387 --------DG----------YCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGK 428

Query: 650 RIQAAIN 656
            I  A++
Sbjct: 429 NIHKAMS 435


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 156/533 (29%), Positives = 265/533 (49%), Gaps = 60/533 (11%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           N++LN +++    H  +       +A  + + PN  TFN++I   C     + A++L  +
Sbjct: 177 NTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQ 236

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M    C PD  TY T++  LCK ++L +   LL +M+  G FP   T+N+L++G CK   
Sbjct: 237 MGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKW 296

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           L  AA++++ M  KG LP+  TYNT++ GLC +G +D+AV L D+M + K +P+ VTY T
Sbjct: 297 LKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNT 356

Query: 338 IINGLVKLGRAVDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           +I+G  +  R  D A +++  M+ R    N   ++ +I     EGK ++A  +  +M+E 
Sbjct: 357 LIDGCFE-HRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVES 415

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF------------------ 438
           G  P+   Y+ +I+G C+ GK  EA +++ EM   G   + F                  
Sbjct: 416 GFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDA 475

Query: 439 -----------------TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
                            TY +L+ G+F+  +  +A+++W++M +   V   + Y+ +I G
Sbjct: 476 YTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRG 535

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC  GK  +A     ++L +G  PD    + +IHG C  G+VE+A +  N+M  +E   +
Sbjct: 536 LCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM--VEHSLK 593

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PD+FT NILL  LC++  +   + L N+ + +G   D VT NI +++             
Sbjct: 594 PDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISS------------- 640

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                     K +R    F ++  M  K L P   T+  +V  L +  R + A
Sbjct: 641 --------FCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEA 685



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/471 (29%), Positives = 250/471 (53%), Gaps = 8/471 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y   +  EEA+RL + M  E+ C     ++N+VL  + +     +  +  + 
Sbjct: 213 TFNILIHGYCSDNNTEEALRLINQM-GEYGCCPDNVTYNTVLTALCKRS---QLTQVRDL 268

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++  K+  + PN  T+N+++   C+L  +  A ++   M  +   PD++TY T++ GLC 
Sbjct: 269 LLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCD 328

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E ++DEAV L D+M+     P  VT+N LI+G  ++     A KLV+ M  +G   N VT
Sbjct: 329 EGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVT 388

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +N +I   C +G +D+A +++ +MV S   P+  TY T+ING  K G+  +  +++  M 
Sbjct: 389 HNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMG 448

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +   ++ +  +TL+  +  E + +DA  L  +  ++G   + V Y  LI G  +  + D
Sbjct: 449 RKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQAD 508

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A ++  EM   G  A   TY+++++G   SGK  +AV+   ++ +   V +E   +++I
Sbjct: 509 RALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIII 568

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           HG C +G + +A     +M+    KPD+   + ++ GLC  G +E+ L LFN  +    K
Sbjct: 569 HGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWI---SK 625

Query: 540 SQP-DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +P D  TYNI++++ CK+  +  + DL+  M  +  +PD  T N  +T L
Sbjct: 626 GKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGL 676



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 193/423 (45%), Gaps = 74/423 (17%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG----------- 236
           +LP+  T+N +++ +C  G +D A++L  +M      PD+ TY TL+DG           
Sbjct: 312 MLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAF 371

Query: 237 ------------------------LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
                                    C E ++DEA  ++ +M   G  P   T+N +ING 
Sbjct: 372 KLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGY 431

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G++  A K++D M  KG   +  T NTL+H +CL+  LD A +L  +      + +E
Sbjct: 432 CKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDE 491

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTYGT                                   LI G FK+ +A+ A+KLW++
Sbjct: 492 VTYGT-----------------------------------LIMGYFKDEQADRALKLWEE 516

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M E G     + Y+ +I GLC  GK D+A + L E++  G   +  T + ++ G+   G 
Sbjct: 517 MKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGA 576

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             KA +    M +++   +    ++L+ GLC +G L +   ++   +S+G   D V Y+ 
Sbjct: 577 VEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNI 636

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +I   C    +E+A  L  EM   E K+ +PD +TYN ++  L K      +  L     
Sbjct: 637 IISSFCKERRLEDAFDLMTEM---EGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFA 693

Query: 572 DRG 574
           ++G
Sbjct: 694 EKG 696



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 206/451 (45%), Gaps = 37/451 (8%)

Query: 68  EIFNSTPKLGSYQ-LGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK 126
           E F   P + +Y  L D  F    +H  +   FK +E +  R  +E  V      I  F 
Sbjct: 343 ESFKLVPDVVTYNTLIDGCF----EHRGSDAAFKLVEEMKARGVKENGVT-HNIMIKWFC 397

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             GK   ++EA  +   MV+         ++N+++N   + G   +  E Y  +      
Sbjct: 398 TEGK---IDEASNVMVKMVESGFSPDCF-TYNTMINGYCKAG---KMAEAYKMMDEMGRK 450

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            +  +T T N ++ T+C    +D+A  L  +   R    D  TY TL+ G  K+ + D A
Sbjct: 451 GLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRA 510

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L +EM+  G   T +T+N +I GLC +G+  +A   ++ +  KG +P+E T N +IHG
Sbjct: 511 LKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHG 570

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C +G ++KA    ++MV     P+  T   ++ GL + G    G  +  +   +   ++
Sbjct: 571 YCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMD 630

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+ +IS   KE + EDA  L  +M  K  +P+   Y+A++ GL + G+ +EAE++  
Sbjct: 631 TVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLAL 690

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +                   F E G+  K  +   ++  ++ +Y+E      I  LC  G
Sbjct: 691 K-------------------FAEKGQQVKTQDTSPELGTSDMMYSEQ-----ISSLCTQG 726

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           K ++A  ++ Q   +G   +   Y  ++ GL
Sbjct: 727 KYKDAMKLFQQAEQKGVSLNKYTYIKLMDGL 757



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 170/385 (44%), Gaps = 39/385 (10%)

Query: 62  EQPFSDEIFNSTPKLGSY-QLGD-STFYSLIQHYANSG---DFKSLEMVLYRMRREKRVV 116
           E  FS + F     +  Y + G  +  Y ++      G   D  +L  +L+ M  EK+  
Sbjct: 414 ESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQ-- 471

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
           L+ ++    KA  + ++++E                   ++ +++    ++    RAL+ 
Sbjct: 472 LDDAYTLTMKARKRGYILDEV------------------TYGTLIMGYFKDEQADRALKL 513

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           +  +   K   I+   +T+N +I+ +C  G  D A+    E+  +   PD  T   ++ G
Sbjct: 514 WEEM---KETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHG 570

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C E  +++A    ++M      P   T N+L+ GLC+ G L +   L +    KG   +
Sbjct: 571 YCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMD 630

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VTYN +I   C +  L+ A  L+  M      P+  TY  I+ GL K GR  +  ++ +
Sbjct: 631 TVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLAL 690

Query: 357 SMEERKFHV-----------NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
              E+   V           ++ +YS  IS L  +GK +DAMKL++Q  +KG   N   Y
Sbjct: 691 KFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTY 750

Query: 406 SALIDGLCRVGKPDEAEEILFEMIN 430
             L+DGL +  K      +L  M++
Sbjct: 751 IKLMDGLLKRRKSFTTTSLLPFMVS 775



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 103/221 (46%), Gaps = 17/221 (7%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E +   I   Y     VE+A + FH  + E   K  + + N +L  + +EG+  + L  +
Sbjct: 561 ESTSNIIIHGYCWEGAVEKAFQ-FHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLF 619

Query: 178 NH-IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           N  I   K M+    T+T+N++I + C+   +++A  L  EM  +N EPD YTY  ++ G
Sbjct: 620 NTWISKGKPMD----TVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTG 675

Query: 237 LCKENRLDEAVLLL-------DEMQVDGCFPTPVTFNVL----INGLCKNGELGRAAKLV 285
           L K  R +EA  L         +++     P   T +++    I+ LC  G+   A KL 
Sbjct: 676 LTKAGRTEEAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLF 735

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
                KG   N+ TY  L+ GL  +       SLL  MV++
Sbjct: 736 QQAEQKGVSLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSA 776


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 242/429 (56%), Gaps = 5/429 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T+ +FN+++N + + G + +A+E ++ +V   +    P+  T+  +I  +C++G    A 
Sbjct: 191 TIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQ---PDVHTYTTIINGLCKIGETVAAA 247

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            LFR+M    C+PD+ TY T++D LCK+ R++EA+ +   M+  G  P   T+N LI GL
Sbjct: 248 GLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGL 307

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C       A+ +++ M     +PN VT++ LI+  C +GN+ +A  +L  M      PN 
Sbjct: 308 CNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNV 367

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY +++NG       V+  ++   M  +    + + Y+ LI+G  K  +  +A +L+ +
Sbjct: 368 VTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNE 427

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +G  P+ V Y+ LIDGLC++G+  EA ++   M+ NG   +  TYS L+ GF + G 
Sbjct: 428 MIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGY 487

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             KA  +++ M       N V Y++LI  +C+   L+EAR +++++  +G +P+V  Y++
Sbjct: 488 LAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTT 547

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I+GLC  G ++EAL+ F  M   E    P+ F+YN+++    +  + S ++ L+  M +
Sbjct: 548 IINGLCKEGLLDEALEAFRNME--EDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRE 605

Query: 573 RGCDPDLVT 581
           +G   D+ T
Sbjct: 606 KGFVADVAT 614



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/404 (32%), Positives = 230/404 (56%), Gaps = 3/404 (0%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +TFN +I  +C++G    A++LF +M  R  +PD++TY T+++GLCK      A  L  +
Sbjct: 193 VTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRK 252

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   GC P  VT++ +I+ LCK+  +  A  +   M  KG  PN  TYN+LI GLC    
Sbjct: 253 MGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSR 312

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
             +A ++L+ M++   MPN VT+  +IN   K G   +   VL +M E     N   YS+
Sbjct: 313 WREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSS 372

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L++G   + +  +A KL+  M+ KGCKP+   Y+ LI+G C+  +  EA+++  EMI+ G
Sbjct: 373 LMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG 432

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              +  +Y++L+ G  + G+  +A +++K+M  N  + +   YS+L+ G C+ G L +A 
Sbjct: 433 LTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAF 492

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++  M S   KP++V Y+ +I  +C + +++EA KLF+E+       QP+V  Y  ++N
Sbjct: 493 RLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFV--QGLQPNVQIYTTIIN 550

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA-LKEKLEA 595
            LCK+  +  +++   +M + GC P+  + N+ +   L+ K E+
Sbjct: 551 GLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDES 594



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 216/447 (48%), Gaps = 40/447 (8%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA-KLVDNMFLKGCLPNEVTYN 301
           +D+A+   + M      P  + FN L++ + K      A   L   M L G  P+  T +
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI+       +D   S+L +++        VT+ T+INGL K+G+      +   M  R
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            +  + + Y+T+I+GL K G+   A  L+++M E GC+P+ V YS +ID LC+  + +EA
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            +I   M   G + N FTY+SL++G     +  +A  +  +M   N + N V +S+LI+ 
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C++G + EAR V   M   G +P+VV YSS+++G      V EA KLF+ M+      +
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMI--TKGCK 399

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQDG 599
           PDVF+YNIL+N  CK   I  +  L N M+ +G  PD+V+ N  +  L +  +L    D 
Sbjct: 400 PDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHD- 458

Query: 600 TDFLNELAIRLFKRQRTSG-----------------------GFKIVEVMLQKFLSPQTS 636
                     LFK   T+G                        F++   M   +L P   
Sbjct: 459 ----------LFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMV 508

Query: 637 TWERVVQELCRPKRIQAAINKCWSNLY 663
            +  ++  +C+ + ++ A  K +S L+
Sbjct: 509 MYNILIDAMCKSRNLKEA-RKLFSELF 534



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 182/346 (52%), Gaps = 4/346 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  +  K   V EA+ +F  M  +      + ++NS++  +     +  A    N +++ 
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMS- 325

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
             +NI+PN +TF+L+I   C+ G V  A  + + M     EP++ TY +LM+G   +  +
Sbjct: 326 --LNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEV 383

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  L D M   GC P   ++N+LING CK   +G A +L + M  +G  P+ V+YNTL
Sbjct: 384 VEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTL 443

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I GLC  G L +A  L   M+ +  +P+  TY  +++G  K G      R+  +M+    
Sbjct: 444 IDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYL 503

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N  +Y+ LI  + K    ++A KL+ ++  +G +PN  +Y+ +I+GLC+ G  DEA E
Sbjct: 504 KPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALE 563

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
               M  +GC  N F+Y+ +++GF +     +AV++  +M +   V
Sbjct: 564 AFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFV 609



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 206/434 (47%), Gaps = 5/434 (1%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
           KLG  QL   TF +LI      G F     +   M          ++  I     K    
Sbjct: 185 KLG-LQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGET 243

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
             A  LF  M  E  C+  V +++++++ + ++   + AL+ ++++   K   I PN  T
Sbjct: 244 VAAAGLFRKM-GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYM---KAKGISPNIFT 299

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I+ +C       A  +  EM   N  P+I T+  L++  CKE  + EA  +L  M 
Sbjct: 300 YNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMT 359

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  VT++ L+NG     E+  A KL D M  KGC P+  +YN LI+G C    + 
Sbjct: 360 EMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIG 419

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A  L + M+     P+ V+Y T+I+GL +LGR  +   +  +M       +   YS L+
Sbjct: 420 EAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILL 479

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G  K+G    A +L++ M     KPN V+Y+ LID +C+     EA ++  E+   G  
Sbjct: 480 DGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQ 539

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N   Y++++ G  + G   +A+E +++M ++ C  NE  Y+V+I G  +      A  +
Sbjct: 540 PNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQL 599

Query: 495 WTQMLSRGCKPDVV 508
             +M  +G   DV 
Sbjct: 600 IGEMREKGFVADVA 613


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 156/547 (28%), Positives = 279/547 (51%), Gaps = 46/547 (8%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           Y+     +Y++++  + +   +  + VL  M + +     ++F ++  +Y +A  +  A+
Sbjct: 130 YRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMVSYSRAGKLRNAM 189

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           R   TM+ +   +  +   N+ ++V++      +A+ F   +   + + I PN +T+N +
Sbjct: 190 RXL-TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM---QIVEIXPNVITYNCL 245

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG- 257
           IK  C L  +++A +L  EMP + C PD  +Y T+M  LCKE R+ E  LL+++M  D  
Sbjct: 246 IKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSN 305

Query: 258 CFPTPVTFN-----------------------------------VLINGLCKNGELGRAA 282
             P  VT+N                                    +++  C+ G + +A 
Sbjct: 306 LLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKAK 365

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           ++V+ MF KGC+P+ VTY ++I+GLC +  +D+A  +L +M    C PN V+Y  ++NGL
Sbjct: 366 EIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGL 425

Query: 343 VKLGRAVDGARVLMSMEERKFHV-NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
            K G +++ AR +M+M E  + + N   YS L+ G  +EGK+ +A  L ++M++KG  P 
Sbjct: 426 CKNGNSLE-AREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPT 484

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V  + LI  LC+  K DEA+  + + +NNGCA N   +++++ GF +      A+ +  
Sbjct: 485 PVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLD 544

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           DM  +N   + V Y+ +I  L + G++ EA  +  +ML  G  P  V Y ++IH  C  G
Sbjct: 545 DMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMG 604

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            VE+ LKL  +ML      Q     YN ++  LC   N+  +  LL  ++      D  T
Sbjct: 605 RVEDLLKLLEKML----SRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDANT 660

Query: 582 CNIFLTA 588
           C++ + +
Sbjct: 661 CHMLIES 667



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 103/444 (23%), Positives = 183/444 (41%), Gaps = 79/444 (17%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK----SFIFIFKAYGKAHLVEEAIRL 140
           ++Y+++         K L +++ +M ++  ++ ++    +F+ +   +G     +EA+  
Sbjct: 276 SYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHG---DEALE- 331

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F    +E   +     ++++++   +EG   +A E  N + +      +P+ +T+  VI 
Sbjct: 332 FLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK---GCIPDVVTYTSVIN 388

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK--------------------- 239
            +C+   VD A ++ R+M    C+P+  +Y  L++GLCK                     
Sbjct: 389 GLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIP 448

Query: 240 --------------ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
                         E +  EA  L+ EM   G FPTPV  N+LI  LC+  ++  A + +
Sbjct: 449 NAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFM 508

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
           +     GC  N V + T+IHG C K +L+ A+SLLD M  S   P+ VTY TII+ L K 
Sbjct: 509 EQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKK 568

Query: 346 GRAVDGARVLMSMEE------------------RKFHVNEYI---------------YST 372
           GR  +  ++ M M                    R   V + +               Y+ 
Sbjct: 569 GRIEEATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQ 628

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +I  L   G  E A KL  +++    K +      LI+     G P  +  +   M N  
Sbjct: 629 VIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRN 688

Query: 433 CAANAFTYSSLMKGFFESGKGHKA 456
              +      + K     GK  +A
Sbjct: 689 LIPDLKLCEKVSKKLMLEGKSEEA 712



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 125/273 (45%), Gaps = 9/273 (3%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
           F+  GK+    EA  L   M+ +      V+  N ++  + QE     A  F    +N  
Sbjct: 460 FRREGKS---SEACDLVREMIKKGFFPTPVE-INLLIQSLCQEEKVDEAKRFMEQCLNN- 514

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
                 N + F  VI   C+   ++ A+ L  +M + N  PD+ TY T++D L K+ R++
Sbjct: 515 --GCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 572

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L  +M   G  PTPVT+  +I+  C+ G +    KL++ M  +        YN +I
Sbjct: 573 EATKLAMKMLRVGWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQ--ECRTAYNQVI 630

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
             LC  GNL++A  LL +++ +    +  T   +I   +  G  +    V   M  R   
Sbjct: 631 EKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLI 690

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
            +  +   +   L  EGK+E+A KL  + +E+G
Sbjct: 691 PDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 723


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 152/490 (31%), Positives = 254/490 (51%), Gaps = 6/490 (1%)

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCKRTVKSFNS 159
           ++++VL RM +   +    S+  + K     +  +EA+ L   M D+   C   V S+ +
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           V+N   +EG   +A   Y+ +++     ILPN +T+N +I  +C+   +D A+++   M 
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDR---GILPNVVTYNSIIAALCKAQAMDKAMEVLTSMV 261

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                P+  TY +++ G C   +  EA+  L +M  DG  P  VT+N L++ LCKNG   
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A K+ D+M  +G  P   TY TL+ G   KG L +   LLD MV +   PN   +  +I
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
               K G+      V   M ++  + +   Y T+I  L K G+ EDAM+ ++QM+++   
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P  +VY++LI  LC   K D+A+E++ EM++ G   +   ++S++    + G+  ++ ++
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           +  M +     N + YS LI G C  GK+ EA  +   M+S G KPD V Y+++I+G C 
Sbjct: 502 FDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
              +E+AL LF EM        PD+ TYNI+L  L +    + + +L   + + G   +L
Sbjct: 562 ISRMEDALVLFREM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 580 VTCNIFLTAL 589
            T NI L  L
Sbjct: 620 STYNIILHGL 629



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 233/486 (47%), Gaps = 28/486 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  YN +  A    + PN  T+ ++I + C  G +D        +  +    D   +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 233 LMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           L+ GLC + R  +A+ ++L  M   GC P   ++N+L+ GLC       A +L+  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 292 G--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
           G  C P+ V+Y T+I+G   +G+LDKA      M+    +PN VTY +II  L K  +A+
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCK-AQAM 250

Query: 350 DGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
           D A  VL SM +     N   Y++++ G    G+ ++A+   K+M   G +P+ V Y++L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           +D LC+ G+  EA ++   M   G      TY +L++G+   G   +   +   M +N  
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N   +S+LI    + GK+ +A +V+++M  +G  PD V Y ++I  LC +G VE+A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            F +M  ++ +  P    YN L+++LC       + +L+  M+DRG   D +        
Sbjct: 431 YFEQM--IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-------- 480

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                        F N +     K  R     K+ ++M++  + P   T+  ++   C  
Sbjct: 481 -------------FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLA 527

Query: 649 KRIQAA 654
            ++  A
Sbjct: 528 GKMDEA 533



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 173/360 (48%), Gaps = 22/360 (6%)

Query: 316 AVSLLDRMV---ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           AVS  +RM    A +  PN  TYG +I      GR   G   L ++ ++ F V+   ++ 
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 373 LISGLFKEGKAEDAMKL-WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           L+ GL  + +  DAM +  ++M + GC PN   Y+ L+ GLC   +  EA E+L  M ++
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 432 G--CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           G  C  +  +Y++++ GFF+ G   KA   + +M     + N V Y+ +I  LC+   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMD 251

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  V T M+  G  P+   Y+S++HG C++G  +EA+    +M       +PDV TYN 
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH--SDGVEPDVVTYNS 309

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQDGTDFLNELA 607
           L++ LCK    + +  + +SM  RG  P++ T    L   A K  L       D +    
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 608 IR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           I               K+ +      +   M Q+ L+P T T+  V+  LC+  R++ A+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 214/441 (48%), Gaps = 12/441 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ S++  Y +SG  K     L +M     E  VV   S +      G+     EA ++F
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC---TEARKMF 327

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIK 200
            +M      KR +K   +    ++Q      AL   + +++    N I PN   F+++I 
Sbjct: 328 DSMT-----KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              + G VD A+ +F +M  +   PD  TY T++  LCK  R+++A+   ++M  +   P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             + +N LI+ LC   +  +A +L+  M  +G   + + +N++I   C +G + ++  L 
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D MV     PN +TY T+I+G    G+  +  ++L SM       +   Y+TLI+G  K 
Sbjct: 503 DLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI 562

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            + EDA+ L+++M   G  P+ + Y+ ++ GL +  +   A+E+   +  +G      TY
Sbjct: 563 SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTY 622

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  ++    +A+ +++++   +       ++++I  L + G+  EA+ ++  + +
Sbjct: 623 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682

Query: 501 RGCKPDVVAYSSMIHGLCNAG 521
            G  PDV  YS M   L   G
Sbjct: 683 NGLVPDVRTYSLMAENLIEQG 703


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 162/527 (30%), Positives = 271/527 (51%), Gaps = 22/527 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA+  F+ M+       +V  F  +L  I     Y   L     +     + I  +  
Sbjct: 55  IDEALSSFNRML-HMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQM---DSLGIPSDVY 110

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T  +VI + C L  VD    +  ++     +PD  T+ TL+ GLC E ++ EA+ L D+M
Sbjct: 111 TLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKM 170

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  LI+GLCK G    A +L+ +M  K C PN +TYNT+I  L     +
Sbjct: 171 VGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQV 230

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           ++A+++   M+A    PN  TY +II+GL K       A ++  M + K   N  I++TL
Sbjct: 231 NEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTL 290

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEG    A  +   M+++G +P+ V Y+AL+DG C   + DEA+++   M+  GC
Sbjct: 291 VDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGC 350

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A N  +YS+L+ G+ +  +  KA+ ++++M +   V N V Y+ LIHGLC  G+LR+A  
Sbjct: 351 APNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIA 410

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           ++ +M++ G  PD+V Y  ++  LC    +++A+ +      +E  +  PD+ +YNI+++
Sbjct: 411 LFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK---AIEGSNLAPDIQSYNIVID 467

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--------KEKL--EAPQDG--- 599
            +C+   +  + DL +S+  +G  PD+ T  I +  L          KL  E   DG   
Sbjct: 468 GMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSP 527

Query: 600 TDFLNELAIRLFKR-QRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            D    L  R F R   T    ++++ ML +  S   ST   +V+ L
Sbjct: 528 DDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEML 574



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 231/446 (51%), Gaps = 11/446 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F +++  +  EG    AL  ++ +V        PN +T+  +I  +C++G    AI+L 
Sbjct: 146 TFTTLIRGLCVEGKIGEALHLFDKMVGE---GFQPNGVTYGTLIHGLCKVGNSRAAIRLL 202

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R M  +NCEP++ TY T++D L K+ +++EA+ +  EM   G  P   T+N +I+GLCK 
Sbjct: 203 RSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKF 262

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            E    A L++ M     +PN V + TL+  LC +G +  A  ++D M+     P+ VTY
Sbjct: 263 SEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTY 322

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +++G        +  +V  +M  +    N   YSTLI+G  K  + + AM L+++M +
Sbjct: 323 TALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQ 382

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +   PN V Y+ LI GLC VG+  +A  +  EM+ +G   +  TY  L+    ++    +
Sbjct: 383 RELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQ 442

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ + K +  +N   +   Y+++I G+C  G+L  A  +++ + S+G  PDV  Y+ MI+
Sbjct: 443 AMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMIN 502

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  G + EA KLF EM        PD  TYN++     + +    +I LL  M+ RG 
Sbjct: 503 GLCLQGLLAEATKLFREMN--TDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGF 560

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTD 601
             D  T  + +  L +      DG D
Sbjct: 561 SADASTITLIVEMLSD------DGLD 580



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 209/411 (50%), Gaps = 10/411 (2%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVE 135
           +Q    T+ +LI      G+ ++   +L  M +   E  V+   ++  I     K   V 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVI---TYNTIIDCLFKDRQVN 231

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ +F  M+ +      V ++NS+++ + +   +       N +V++K   I+PN + F
Sbjct: 232 EALNIFSEMIAK-GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK---IMPNVVIF 287

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
             ++  +C+ G+V  A  +   M  R  EPD+ TY  LMDG C  + +DEA  + D M  
Sbjct: 288 TTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR 347

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            GC P  ++++ LING CK   + +A  L + M  +  +PN VTYNTLIHGLC  G L  
Sbjct: 348 KGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRD 407

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A++L   MVAS  +P+ VTY  +++ L K         +L ++E      +   Y+ +I 
Sbjct: 408 AIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVID 467

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G+ + G+ E A  L+  +  KG  P+   Y+ +I+GLC  G   EA ++  EM  +GC+ 
Sbjct: 468 GMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSP 527

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +  TY+ + +GF  + +   A+++ ++M       +    ++++  L +DG
Sbjct: 528 DDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 225/460 (48%), Gaps = 5/460 (1%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
           KLG +Q   +TF +LI+     G       +  +M  E       ++  +     K    
Sbjct: 137 KLG-HQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNS 195

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
             AIRL  +MV + +C+  V ++N++++ + ++   + AL  ++ ++ AK   I PN  T
Sbjct: 196 RAAIRLLRSMVQK-NCEPNVITYNTIIDCLFKDRQVNEALNIFSEMI-AK--GISPNVST 251

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I  +C+     +   L  EM      P++  + TL+D LCKE  +  A  ++D M 
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMI 311

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  VT+  L++G C   E+  A K+ D M  KGC PN ++Y+TLI+G C    +D
Sbjct: 312 QRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRID 371

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA+ L + M   + +PN VTY T+I+GL  +GR  D   +   M       +   Y  L+
Sbjct: 372 KAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILL 431

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L K    + AM + K +      P+   Y+ +IDG+CRVG+ + A ++   + + G  
Sbjct: 432 DYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLH 491

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            + +TY+ ++ G    G   +A +++++M  + C  ++  Y+++  G   + +   A  +
Sbjct: 492 PDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQL 551

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
             +ML RG   D    + ++  L + G  +   ++ +E +
Sbjct: 552 LQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFV 591



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 138/262 (52%), Gaps = 4/262 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA ++F TMV +  C   V S+++++N   +     +A+  +  +   +   ++PN +
Sbjct: 335 MDEADKVFDTMVRK-GCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRE---LVPNIV 390

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +I  +C +G + +AI LF EM      PD+ TY  L+D LCK   LD+A+ +L  +
Sbjct: 391 TYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAI 450

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +     P   ++N++I+G+C+ GEL  A  L  ++  KG  P+  TY  +I+GLCL+G L
Sbjct: 451 EGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLL 510

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L   M    C P++ TY  I  G ++    +   ++L  M  R F  +    + +
Sbjct: 511 AEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLI 570

Query: 374 ISGLFKEGKAEDAMKLWKQMME 395
           +  L  +G  +   ++  + ++
Sbjct: 571 VEMLSDDGLDQSVKQILHEFVQ 592



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 23/172 (13%)

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           +++I+  C   ++     V  ++   G +PD   ++++I GLC  G + EAL LF++M+ 
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMV- 171

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
                QP+  TY  L++ LCK  N   +I LL SM+ + C+P+++T N  +  L      
Sbjct: 172 -GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCL------ 224

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                          FK ++ +    I   M+ K +SP  ST+  ++  LC+
Sbjct: 225 ---------------FKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCK 261



 Score = 47.8 bits (112), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 23/160 (14%)

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           QM S G   DV   + +I+  C+   V+    +  ++  L    QPD  T+  L+  LC 
Sbjct: 99  QMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKL--GHQPDTATFTTLIRGLCV 156

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
           +  I  ++ L + M+  G  P+ VT    +  L                      K   +
Sbjct: 157 EGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGL---------------------CKVGNS 195

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
               +++  M+QK   P   T+  ++  L + +++  A+N
Sbjct: 196 RAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALN 235


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  252 bits (644), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 166/647 (25%), Positives = 295/647 (45%), Gaps = 82/647 (12%)

Query: 38  FFSVRSAVSSNKQMETE---PQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYA 94
           F +  ++   NK  E E   PQ  ++S  P + E      +            + ++  A
Sbjct: 19  FSAAPASNHRNKCAEIEIRWPQERSRSPAPNAGEALARAHE------------ATVRRLA 66

Query: 95  NSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKR-T 153
            +GD   ++  L  MR       E + +    A+ +A   + A++ F+    +  C   T
Sbjct: 67  AAGDLDGVQYTLQEMRLRGVACPEGALVAAICAFARAGAADRALKTFYRARHDLGCAAPT 126

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V+ +N +L+ +++E L    +  Y+   N +   + PN  T+NL+IK +C+   V  A +
Sbjct: 127 VRVYNHLLDALLRENLVAAVVPVYD---NMRKAGVEPNVYTYNLLIKALCQNDRVGAARR 183

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  EM  + C PD  ++ T++  LCK +RLDEA  +L EM      P   ++N +++ LC
Sbjct: 184 MLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT-----PVGASYNAVVHALC 238

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN-- 331
               +     +VD M  +G  P+ V Y +++   C    L  A ++L RMV   C+PN  
Sbjct: 239 GQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQ 298

Query: 332 ---------------------------------EVTYGTIINGLVKLGRAVDGARVLMSM 358
                                             ++Y  +I GL  +G       V   M
Sbjct: 299 TFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCM 358

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +     +   YSTLI G  K G  + AM +W  M   GCKPN VVY+ ++D LC+    
Sbjct: 359 GKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMF 418

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+AE ++ +M    C  N  T+++L++   + G+  +A+ ++  M +  C  N+  Y+ L
Sbjct: 419 DQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNEL 478

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           +HGL  +G   +A  + T+ML+ G +  +V+Y++ I GLC    ++EA+ L   M+    
Sbjct: 479 LHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMII--Q 536

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
             QPD FT+N +++A CK+ N+  +  +L  M    C  ++V     ++ L  + +    
Sbjct: 537 GIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHK---- 592

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
               L++  + L K             ML + + P  +TW  +V+ +
Sbjct: 593 ----LDDAMVYLLK-------------MLYEGICPNEATWNVLVRGI 622



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 197/416 (47%), Gaps = 26/416 (6%)

Query: 257 GCF-PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
           GC  PT   +N L++ L +   +     + DNM   G  PN  TYN LI  LC    +  
Sbjct: 121 GCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGA 180

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +LD M    C P+EV++ TII+ L KL R  +   +L  M           Y+ ++ 
Sbjct: 181 ARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGAS-----YNAVVH 235

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
            L  + +  +   +  +M+ +G +P+TV Y++++   C+  +   A  IL  M+  GC  
Sbjct: 236 ALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVP 295

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  T++ L+KGFF+ GK H A+ +W  M       + + Y+VLI GLC  G L+ A  V+
Sbjct: 296 NVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVF 355

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
           + M    C PDV  YS++I G   AG ++ A+ ++N+M       +P+V  Y  +++ LC
Sbjct: 356 SCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMT--NAGCKPNVVVYTNMVDVLC 413

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA----------------PQDG 599
           K+     + +L++ M    C P+ +T N  + +L +   A                P D 
Sbjct: 414 KKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDR 473

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           T   NEL   LF+        +++  ML         ++   +  LC+ + I+ A+
Sbjct: 474 T--YNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAM 527



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + S++  +  + + +    +L RM  E  V   ++F  + K +     V +A+ +++ M
Sbjct: 264 AYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWM 323

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V E     T+ S+N ++  +   G   RAL  ++ +  +   + LP+  T++ +I    +
Sbjct: 324 VAEGWAPSTI-SYNVLIRGLCHIGDLKRALFVFSCMGKS---DCLPDVRTYSTLIDGFSK 379

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +D A+ ++ +M    C+P++  Y  ++D LCK+   D+A  L+D+M ++ C P  +T
Sbjct: 380 AGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLT 439

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI  LC  G  GRA  +   M   GC PN+ TYN L+HGL  +GN + A+ +L  M+
Sbjct: 440 FNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEML 499

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKA 383
                 + V+Y T I+GL ++ R +  A +L+  M  +    + + ++ +I    KEG  
Sbjct: 500 NHGFELSLVSYNTTISGLCQM-RMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNV 558

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A  +  +M    C  N V Y++L+ GLC   K D+A   L +M+  G   N  T++ L
Sbjct: 559 RAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVL 618

Query: 444 MKGFF 448
           ++G F
Sbjct: 619 VRGIF 623



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/425 (24%), Positives = 187/425 (44%), Gaps = 36/425 (8%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK----G 292
           L     LD     L EM++ G          L+  +C     G A + +   +      G
Sbjct: 65  LAAAGDLDGVQYTLQEMRLRG---VACPEGALVAAICAFARAGAADRALKTFYRARHDLG 121

Query: 293 CL-PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           C  P    YN L+  L  +  +   V + D M  +   PN  TY  +I  L +  R    
Sbjct: 122 CAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAA 181

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            R+L  M  +    +E  ++T+IS L K  + ++A  +  +M   G       Y+A++  
Sbjct: 182 RRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGAS-----YNAVVHA 236

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC   +  E   ++ EM++ G   +   Y+S++  F ++ +   A  I   M    CV N
Sbjct: 237 LCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPN 296

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              ++VL+ G  +DGK+ +A  +W  M++ G  P  ++Y+ +I GLC+ G ++ AL +F+
Sbjct: 297 VQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFS 356

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            M   +    PDV TY+ L++   K  ++  ++ + N M + GC P++V     +  L +
Sbjct: 357 CMG--KSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCK 414

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           K+                +F +        +++ M  +   P T T+  +++ LC   R 
Sbjct: 415 KV----------------MFDQAE-----NLIDKMSLENCPPNTLTFNTLIRSLCDLGRA 453

Query: 652 QAAIN 656
             A+N
Sbjct: 454 GRALN 458


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  252 bits (644), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 159/525 (30%), Positives = 263/525 (50%), Gaps = 7/525 (1%)

Query: 82  GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           G   F  L   +   G  +       RMR  + +   +S  F+     K+   +   + F
Sbjct: 218 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 277

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           + M+       +V ++N +++ + +EG    +   +   V  + M + P+ +T+N +I  
Sbjct: 278 NDMIGA-GIAPSVFTYNVMIDYLCKEGDLENSRRLF---VQMREMGLSPDVVTYNSLIDG 333

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             ++G ++    LF EM    C PDI TY  L++  CK  ++  A     EM+ +G  P 
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 393

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT++ LI+  CK G +  A KL  +M   G LPNE TY +LI   C  GNL +A  LL+
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 453

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M+ +    N VTY  +++GL K GR ++   V  SM +     N+ +Y+ L+ G  K  
Sbjct: 454 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 513

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + EDAMK+ KQM E   KP+ ++Y ++I G C   K +E + IL EM + G +AN    +
Sbjct: 514 RMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIST 573

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +++  +F++GK   A+  +++M         V Y VLI GLC+ G +  A   + +MLS 
Sbjct: 574 TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSL 633

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G +P+V  Y+S+I GLC    +E A KLF+EM C      PD+  +  L++   K  N+ 
Sbjct: 634 GLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQC--RGMTPDITAFTALIDGNLKHGNLQ 691

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            ++ L++ M +   + DL      ++   +  E  Q    F NE+
Sbjct: 692 EALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQ-ARKFFNEM 735



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 153/550 (27%), Positives = 261/550 (47%), Gaps = 29/550 (5%)

Query: 29  TIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNS-TPKLGSYQLGDSTFY 87
           T+P  RS  F   R + S N Q+           + F+D I     P + +Y +      
Sbjct: 250 TLPKARSCNFLLHRLSKSGNGQL---------VRKFFNDMIGAGIAPSVFTYNV------ 294

Query: 88  SLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            +I +    GD ++   +  +MR       VV   S I     YGK   +EE   LF+ M
Sbjct: 295 -MIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLI---DGYGKVGSLEEVASLFNEM 350

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   C   + ++N ++N   +     RA E+++ +   K+  + PN +T++ +I   C+
Sbjct: 351 KD-VGCVPDIITYNGLINCYCKFEKMPRAFEYFSEM---KNNGLKPNVVTYSTLIDAFCK 406

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G++  AI+LF +M      P+ +TY +L+D  CK   L EA  LL++M   G     VT
Sbjct: 407 EGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 466

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L++GLCK G +  A ++  +M   G  PN+  Y  L+HG      ++ A+ +L +M 
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ + YG+II G     +  +   +L  M+ R    N  I +T+I   FK GK+ 
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 586

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA+  +++M + G +   V Y  LIDGLC+ G  + A +    M++ G   N   Y+SL+
Sbjct: 587 DALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 646

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++     A +++ +M       +   ++ LI G  + G L+EA ++ ++M     +
Sbjct: 647 DGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 706

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D+  Y+S++ G    G + +A K FNEM  +E    P+      LL    K+  +  +I
Sbjct: 707 FDLHVYTSLVSGFSQCGELHQARKFFNEM--IEKGILPEEVLCICLLREYYKRGQLDEAI 764

Query: 565 DLLNSMMDRG 574
           +L N M   G
Sbjct: 765 ELKNEMERMG 774



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 154/323 (47%), Gaps = 2/323 (0%)

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C      F+VL +   + G L  A +    M     LP   + N L+H L   GN     
Sbjct: 215 CVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVR 274

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
              + M+ +   P+  TY  +I+ L K G   +  R+ + M E     +   Y++LI G 
Sbjct: 275 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 334

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K G  E+   L+ +M + GC P+ + Y+ LI+  C+  K   A E   EM NNG   N 
Sbjct: 335 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNV 394

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TYS+L+  F + G    A++++ DM +   + NE  Y+ LI   C+ G L EA  +   
Sbjct: 395 VTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLND 454

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           ML  G K ++V Y++++ GLC AG + EA ++F  M  L+    P+   Y  L++   K 
Sbjct: 455 MLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSM--LKDGISPNQQVYTALVHGYIKA 512

Query: 558 SNISHSIDLLNSMMDRGCDPDLV 580
             +  ++ +L  M +    PDL+
Sbjct: 513 ERMEDAMKILKQMTECNIKPDLI 535



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 173/390 (44%), Gaps = 39/390 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +   G  +    +   MRR   +  E ++  +  A  KA  + EA +L + M
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +   K  + ++ ++L+ + + G    A E +  ++      I PN   +  ++    +
Sbjct: 456 L-QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKD---GISPNQQVYTALVHGYIK 511

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV- 263
              +++A+++ ++M   N +PD+  Y +++ G C + +L+E  L+L+EM+  G    PV 
Sbjct: 512 AERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVI 571

Query: 264 ----------------------------------TFNVLINGLCKNGELGRAAKLVDNMF 289
                                             T+ VLI+GLCK G +  A      M 
Sbjct: 572 STTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRML 631

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             G  PN   Y +LI GLC    ++ A  L D M      P+   +  +I+G +K G   
Sbjct: 632 SLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQ 691

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +   ++  M E     + ++Y++L+SG  + G+   A K + +M+EKG  P  V+   L+
Sbjct: 692 EALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLL 751

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFT 439
               + G+ DEA E+  EM   G    + T
Sbjct: 752 REYYKRGQLDEAIELKNEMERMGLITESAT 781



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 97/234 (41%), Gaps = 26/234 (11%)

Query: 425 LFEMI---NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           +F+M+    N C + +  +  L   F E G   +A E +  M     +      + L+H 
Sbjct: 204 IFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHR 263

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           L + G  +  R  +  M+  G  P V  Y+ MI  LC  G +E + +LF +M   E    
Sbjct: 264 LSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMR--EMGLS 321

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PDV TYN L++   K  ++     L N M D GC PD++T N  +    +  + P+    
Sbjct: 322 PDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPR---- 377

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                A   F   + +G            L P   T+  ++   C+   +Q AI
Sbjct: 378 -----AFEYFSEMKNNG------------LKPNVVTYSTLIDAFCKEGMMQGAI 414


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  252 bits (643), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 147/451 (32%), Positives = 243/451 (53%), Gaps = 15/451 (3%)

Query: 134 VEEAIRLFHTMV--DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL-- 189
           +++A+  F+ M+  +   C   +  F  +L+ I++ G Y+ A+     I  +K M +   
Sbjct: 75  IDDALASFNHMLHREPLPC---IIQFTKLLSAIVKMGQYYGAV-----ISLSKQMELAGL 126

Query: 190 -PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P+  T +++I     L  VD A  +F +M     +PD  T+ TL++GLCK  +  +AV 
Sbjct: 127 SPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVE 186

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
             D+ +  GC PT  T+  +INGLCK GE   AA L   M   GC PN VTYN LI  LC
Sbjct: 187 FFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLC 246

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
               +++A+ +   M A +  P+  TY ++I GL    R  + + +L  M       N +
Sbjct: 247 KDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIF 306

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ L+  + KEGK  +A  ++K M E G +P+ V YS+L+ G     +  EA ++   M
Sbjct: 307 TFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAM 366

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I  GC  +AF+Y+ L+KG+ ++ +  +A +++ +M       + V Y+ LIHGLC+ G+L
Sbjct: 367 ITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRL 426

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           REA+ ++  M S G  PD+  YS ++ G C  G + +A +LF  M     K  PD+  YN
Sbjct: 427 REAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLK--PDIAMYN 484

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           IL++A+CK  N+  +  L + +  +G  P++
Sbjct: 485 ILIDAMCKFGNLKDARKLFSELFVQGLLPNV 515



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 221/401 (55%), Gaps = 2/401 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P+ +TFN +I  +C++G    A++ F +     C+P +YTY T+++GLCK      
Sbjct: 159 LGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTA 218

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  L  +M+  GC P  VT+N+LI+ LCK+  +  A  +   M  K   P+  TYN+LI 
Sbjct: 219 AAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQ 278

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC      +A +LL+ M +   MPN  T+  +++ + K G+  +   V  +M E     
Sbjct: 279 GLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEP 338

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   YS+L+ G     +  +A KL+  M+ KGCKP+   Y+ LI G C+  + DEA+++ 
Sbjct: 339 DVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLF 398

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EMI+ G   +   Y++L+ G  + G+  +A +++K+M  N  + +   YS+L+ G C++
Sbjct: 399 NEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKE 458

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L +A  ++  M S   KPD+  Y+ +I  +C  G++++A KLF+E+        P+V 
Sbjct: 459 GYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFV--QGLLPNVQ 516

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            Y  ++N LCK+  +  +++   +M   GC PD  + N+ +
Sbjct: 517 IYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 238/446 (53%), Gaps = 8/446 (1%)

Query: 131 AHL--VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           +HL  V+ A  +F  M+ +   +    +FN+++N + + G + +A+EF++     +    
Sbjct: 141 SHLQRVDLAFSVFSKMI-KLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDF---EASGC 196

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P   T+  +I  +C++G    A  LF++M    C+P++ TY  L+D LCK+  ++EA+ 
Sbjct: 197 QPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALD 256

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +   M+     P   T+N LI GLC       A+ L++ M     +PN  T+N L+  +C
Sbjct: 257 IFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAIC 316

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +G + +A  +   M      P+ VTY +++ G       V+  ++  +M  +    + +
Sbjct: 317 KEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAF 376

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ LI G  K  + ++A +L+ +M+ +G  P+ V Y+ LI GLC++G+  EA+++   M
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            +NG   + FTYS L+ GF + G   KA  +++ M       +   Y++LI  +C+ G L
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           ++AR +++++  +G  P+V  Y+++I+ LC  G ++EAL+ F  M        PD F+YN
Sbjct: 497 KDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNM--EGDGCPPDEFSYN 554

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRG 574
           +++    +  + S +  L+  M DRG
Sbjct: 555 VIIRGFLQYKDESRAAQLIGEMRDRG 580



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 211/447 (47%), Gaps = 40/447 (8%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL-GRAAKLVDNMFLKGCLPNEVTYN 301
           +D+A+   + M      P  + F  L++ + K G+  G    L   M L G  P+  T +
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI        +D A S+  +M+     P+ VT+ T+INGL K+G+           E  
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
                 Y Y+T+I+GL K G+   A  L+K+M E GC+PN V Y+ LID LC+    +EA
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            +I   M     + + FTY+SL++G     +  +A  +  +M   N + N   ++VL+  
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           +C++GK+ EA+ V+  M   G +PDVV YSS+++G      + EA KLF+ M+      +
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI--TKGCK 372

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQDG 599
           PD F+YNIL+   CK   I  +  L N M+ +G  PD V  N  +  L +  +L   QD 
Sbjct: 373 PDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQD- 431

Query: 600 TDFLNELAIRLFKRQRTSG-----------------------GFKIVEVMLQKFLSPQTS 636
                     LFK   ++G                        F++  VM   +L P  +
Sbjct: 432 ----------LFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIA 481

Query: 637 TWERVVQELCRPKRIQAAINKCWSNLY 663
            +  ++  +C+   ++ A  K +S L+
Sbjct: 482 MYNILIDAMCKFGNLKDA-RKLFSELF 507



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 182/345 (52%), Gaps = 26/345 (7%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS--MEERKFHVNEYI 369
           N+D A++  + M+  + +P  + +  +++ +VK+G+   GA + +S  ME      + Y 
Sbjct: 74  NIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYY-GAVISLSKQMELAGLSPDIYT 132

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            S LI       + + A  ++ +M++ G +P+ V ++ LI+GLC+VGK  +A E   +  
Sbjct: 133 LSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFE 192

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            +GC    +TY++++ G  + G+   A  ++K M +  C  N V Y++LI  LC+D  + 
Sbjct: 193 ASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVN 252

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  +++ M ++   PD+  Y+S+I GLCN    +EA  L NEM  L     P++FT+N+
Sbjct: 253 EALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSL--NIMPNIFTFNV 310

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L++A+CK+  +S +  +  +M + G +PD+VT +  +     ++E  +         A +
Sbjct: 311 LVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVE---------ARK 361

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           LF            + M+ K   P   ++  +++  C+ KRI  A
Sbjct: 362 LF------------DAMITKGCKPDAFSYNILIKGYCKAKRIDEA 394



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 160/345 (46%), Gaps = 39/345 (11%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K  LV EA+ +F  M  +      + ++NS++  +     +  A    N + +   +NI+
Sbjct: 247 KDKLVNEALDIFSYMKAK-RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTS---LNIM 302

Query: 190 PNTLTFNLVIKTVCRLGLVDNAI-----------------------------------QL 214
           PN  TFN+++  +C+ G V  A                                    +L
Sbjct: 303 PNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKL 362

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           F  M  + C+PD ++Y  L+ G CK  R+DEA  L +EM   G  P  V +N LI+GLC+
Sbjct: 363 FDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQ 422

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G L  A  L  NM   G LP+  TY+ L+ G C +G L KA  L   M ++   P+   
Sbjct: 423 LGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAM 482

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y  +I+ + K G   D  ++   +  +    N  IY+T+I+ L KEG  ++A++ ++ M 
Sbjct: 483 YNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNME 542

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             GC P+   Y+ +I G  +      A +++ EM + G  A A T
Sbjct: 543 GDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFVAEAGT 587



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/244 (29%), Positives = 113/244 (46%), Gaps = 39/244 (15%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  + K Y KA  ++EA +LF+ M+                                  
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMI---------------------------------- 402

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
                H  + P+ + +N +I  +C+LG +  A  LF+ M      PD++TY  L+DG CK
Sbjct: 403 -----HQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCK 457

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E  L +A  L   MQ     P    +N+LI+ +CK G L  A KL   +F++G LPN   
Sbjct: 458 EGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQI 517

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y T+I+ LC +G LD+A+     M    C P+E +Y  II G ++       A+++  M 
Sbjct: 518 YTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMR 577

Query: 360 ERKF 363
           +R F
Sbjct: 578 DRGF 581


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 154/535 (28%), Positives = 275/535 (51%), Gaps = 26/535 (4%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           AI+ F    ++   K  V S+N +L+++++ G + R  + Y  ++   H    PN +TF 
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLL---HSGCSPNLVTFK 66

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           ++I+  C+ G    A++  R +   +  PD+Y +  L+ GL K+   D+AV L + M+  
Sbjct: 67  ILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHGLCLKGNLD 314
              P  VT+N +I+GLCK+G L +A +L++ M  KG    P+ VTYNTLI+       + 
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIR 186

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A +  ++M A+   P+ +T   +++G+ K G   +   +L  M+      +   Y+++I
Sbjct: 187 EACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSII 246

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L   GK  +A ++ K M    C P+ V ++ L+DG C+ G    A E+L EM      
Sbjct: 247 HALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENIL 303

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  TY+ L+ G    G+   A  + +++ +   + + + Y+ L+ GLC+ G++ EA  +
Sbjct: 304 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKL 363

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M  RGC+  VV YSS++ G C AG+V +A ++  EM+ +     P +FTYNI+L  L
Sbjct: 364 VKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSI--NMVPPLFTYNIVLGGL 421

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR----- 609
            K  +IS ++ L++ ++ RG  PD+VT N  +  L  K    ++  D  +E+A R     
Sbjct: 422 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC-KANRVREACDLADEMASRGCFPN 480

Query: 610 ----------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                     L +  R    + +V  M +K  +P    +  ++  LC+  R+  A
Sbjct: 481 DVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDA 535



 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 246/445 (55%), Gaps = 9/445 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++A++LF  M +    K  + ++N+V++ + + G   +A E    ++  K     P+ +T
Sbjct: 114 DQAVKLFENM-ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIR-KGGKSAPDIVT 171

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I    R   +  A     +M      PD+ T   L+ G+CK+  ++EA+ +LD M+
Sbjct: 172 YNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMK 231

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           + G  P  +T+N +I+ LC  G++  AA+++  M    C P+ VT+NTL+ G C  G L 
Sbjct: 232 LAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLP 288

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI-YSTL 373
           +A+ +L+ M     +P+ +TY  ++NGL ++G+ V  A  L+    R+ ++ + I Y++L
Sbjct: 289 RALEVLEEMCRENILPDVITYTILVNGLCRVGQ-VQVAFYLLEEIVRQGYIPDVIAYTSL 347

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL K G+ E+A KL K+M  +GC+   V+YS+L+ G CR G   +A EIL EM++   
Sbjct: 348 VDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
               FTY+ ++ G  + G   KAV +  D+     V + V Y+ LI GLC+  ++REA  
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  +M SRGC P+ V   S++ GLC  G V++A  L  EM     +  P+V  Y  L++ 
Sbjct: 468 LADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS--RKRHAPNVVVYTSLIDG 525

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPD 578
           LCK   +  +  +L++M  +G   D
Sbjct: 526 LCKSDRMDDACMVLDAMRGQGVALD 550



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 228/452 (50%), Gaps = 9/452 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE--KRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           T+ ++I     SG+ +    +L  M R+  K      ++  +  A+ +A  + EA   F 
Sbjct: 134 TYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACA-FR 192

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             +        V + N +++ I ++G    ALE  + +   K    +P+ +T+N +I  +
Sbjct: 193 EKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGM---KLAGPVPDVITYNSIIHAL 249

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C  G V  A ++ + M   +C PD+ T+ TL+DG CK   L  A+ +L+EM  +   P  
Sbjct: 250 CVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDV 306

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +T+ +L+NGLC+ G++  A  L++ +  +G +P+ + Y +L+ GLC  G +++A  L+  
Sbjct: 307 ITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKE 366

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C    V Y ++++G  + G       +L  M         + Y+ ++ GL K+G 
Sbjct: 367 MSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGS 426

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A+ L   ++ +G  P+ V Y+ LIDGLC+  +  EA ++  EM + GC  N  T  S
Sbjct: 427 ISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGS 486

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G    G+   A  +  +M++     N V Y+ LI GLC+  ++ +A MV   M  +G
Sbjct: 487 VVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQG 546

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
              D  AY  +I  + + G V EA+ +++EM+
Sbjct: 547 VALDDFAYRKLIVSMSHGGRVAEAMAMYDEMV 578



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 193/373 (51%), Gaps = 7/373 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           VEEA+ +   M         + ++NS+++ +   G    A E        K M+  P+ +
Sbjct: 220 VEEALEILDGMKLAGPVPDVI-TYNSIIHALCVAGKVVEAAEIL------KTMSCSPDLV 272

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN ++   C+ G++  A+++  EM   N  PD+ TY  L++GLC+  ++  A  LL+E+
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  + +  L++GLCK+GE+  A KLV  M ++GC    V Y++L+ G C  GN+
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV 392

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            KA  +L  MV+   +P   TY  ++ GL+K G       ++  +  R +  +   Y+TL
Sbjct: 393 HKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I GL K  +  +A  L  +M  +GC PN V   +++ GLCRVG+ D+A  ++ EM     
Sbjct: 453 IDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 512

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A N   Y+SL+ G  +S +   A  +   M       ++  Y  LI  +   G++ EA  
Sbjct: 513 APNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMA 572

Query: 494 VWTQMLSRGCKPD 506
           ++ +M++RG  PD
Sbjct: 573 MYDEMVARGFLPD 585



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 191/413 (46%), Gaps = 47/413 (11%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           L+      GD +    +L  M+    V    ++  I  A   A  V EA  +  TM    
Sbjct: 210 LVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---- 265

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
            C   + +FN++L+   + G+  RALE    +      NILP+ +T+ +++  +CR+G V
Sbjct: 266 SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE---NILPDVITYTILVNGLCRVGQV 322

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC---------- 258
             A  L  E+  +   PD+  Y +L+DGLCK   ++EA  L+ EM V GC          
Sbjct: 323 QVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSL 382

Query: 259 -------------------------FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
                                     P   T+N+++ GL K+G + +A  L+ ++  +G 
Sbjct: 383 VSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 442

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           +P+ VTYNTLI GLC    + +A  L D M +  C PN+VT G+++ GL ++GR  D   
Sbjct: 443 VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWS 502

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +++ M  ++   N  +Y++LI GL K  + +DA  +   M  +G   +   Y  LI  + 
Sbjct: 503 LVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMS 562

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
             G+  EA  +  EM+  G   +  T  +L     E      +V  W ++ +N
Sbjct: 563 HGGRVAEAMAMYDEMVARGFLPDGSTSKTL-----EEAAMSNSVFEWTNLEEN 610


>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
          Length = 479

 Score =  252 bits (643), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 143/416 (34%), Positives = 234/416 (56%), Gaps = 12/416 (2%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +TF ++I    +   F+  E +L RM++E   V E  F+ I + YG+ H   +AIR+FH 
Sbjct: 51  NTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHK 110

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D F  K T KS+ +V +++++E    RA+ FY  +   +   I P  ++ N++IK +C
Sbjct: 111 MED-FQVKPTQKSYLTVFDILVEENHVKRAIGFYKEM---REKGIPPTVVSLNILIKALC 166

Query: 204 R-LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           +    V++A +LFREMP R C+PD YTY TL++GLCK  ++ +A  LLDEM+  G  P+ 
Sbjct: 167 KNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSV 226

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V++  LI+GLC++  L  A +L++ M + G  PN  TY++L+ GLC  G+  +A+ LL+ 
Sbjct: 227 VSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEV 286

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MV  + +PN VTY T+INGL K G+  +   +L  M  +    +  +Y  +ISGL     
Sbjct: 287 MVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACN 346

Query: 383 AEDAMKLWKQMMEKGCKPNTV-------VYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
            ++A     +M   G  PN         +++ ++ GLC    P  A ++   M   G + 
Sbjct: 347 YQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISV 406

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
              T+  L+K F + G  +KA  I ++M  + C+ +E  ++VL+ GL +  K+RE 
Sbjct: 407 EIGTFDCLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRET 462



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 190/385 (49%), Gaps = 20/385 (5%)

Query: 198 VIKTVCR-LGLVD---NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           V  T+CR  G V    +AI++F +M     +P   +Y T+ D L +EN +  A+    EM
Sbjct: 87  VFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEM 146

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAA-KLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +  G  PT V+ N+LI  LCKN E   +A +L   M  +GC P+  TY TLI+GLC  G 
Sbjct: 147 REKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGK 206

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           + +A  LLD M      P+ V+Y ++I+GL +     +   +L  M       N + YS+
Sbjct: 207 ISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSS 266

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ GL K G +  AM+L + M+ +   PN V YS LI+GLC+ GK  EA EIL  M   G
Sbjct: 267 LMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQG 326

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS-------VLIHGLCED 485
              +A  Y  ++ G   +    +A     +MA      N   ++       +++ GLC +
Sbjct: 327 LKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNN 386

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQP 542
                A  ++  M +RG   ++  +  ++   C  G + +A ++  EM+   C+     P
Sbjct: 387 VDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCI-----P 441

Query: 543 DVFTYNILLNALCKQSNISHSIDLL 567
           D   +N+L+  L  +  +  + +LL
Sbjct: 442 DEGMWNVLMCGLWDRKKVRETTELL 466



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 177/362 (48%), Gaps = 6/362 (1%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D  T+  ++  L   N+   A  +L+ M+ + C  T   F  +  G  +      A ++ 
Sbjct: 49  DHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVF 108

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M      P + +Y T+   L  + ++ +A+     M      P  V+   +I  L K 
Sbjct: 109 HKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKN 168

Query: 346 GRAVDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
              V+ A R+   M  R    + Y Y TLI+GL K GK   A +L  +M EKG  P+ V 
Sbjct: 169 EETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVS 228

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y++LI GLC+    DEA E+L EMI NG   N FTYSSLM G  +SG   +A+E+ + M 
Sbjct: 229 YTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMV 288

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +   + N V YS LI+GLC++GK REA  +  +M  +G KPD   Y  +I GLC A + +
Sbjct: 289 RRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQ 348

Query: 525 EALKLFNEMLC--LEPKSQPDVF---TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           EA    +EM    + P      F    +N+++  LC   + + +  L  SM  RG   ++
Sbjct: 349 EAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEI 408

Query: 580 VT 581
            T
Sbjct: 409 GT 410



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 165/359 (45%), Gaps = 59/359 (16%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T+  +IH L        A  +L+RM    C   E  + TI  G  ++ R +D  RV   M
Sbjct: 52  TFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKM 111

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E+ +    +  Y T+   L +E   + A+  +K+M EKG  P  V  + LI  LC+  + 
Sbjct: 112 EDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEET 171

Query: 419 DEAEEILF-EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            E+   LF EM N GC  +++T                                   Y  
Sbjct: 172 VESAFRLFREMPNRGCQPDSYT-----------------------------------YGT 196

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI+GLC+ GK+ +A+ +  +M  +G  P VV+Y+S+IHGLC + +++EA++L  EM+   
Sbjct: 197 LINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMII-- 254

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
              +P+VFTY+ L++ LCK  + S +++LL  M+ R   P++VT +  +  L ++ +  +
Sbjct: 255 NGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHRE 314

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                    A+ +  R R  G            L P    + R++  LC     Q A N
Sbjct: 315 ---------AVEILDRMRLQG------------LKPDAGMYGRIISGLCAACNYQEAAN 352



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/340 (23%), Positives = 163/340 (47%), Gaps = 32/340 (9%)

Query: 324 VASKCM---PNEVTYGTIINGLVKLGRAVDGARVLM--SMEE--RKFHVNEYIYSTLISG 376
           +ASK +   P ++T  +++  L+K  + ++   V+   + EE    F  +   +  +I  
Sbjct: 1   MASKTLFKWPKQIT-NSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHR 59

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L    +   A  + ++M ++ C+    V+  +  G  RV +P +A  +  +M +      
Sbjct: 60  LVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPT 119

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE-ARMVW 495
             +Y ++     E     +A+  +K+M +       V  ++LI  LC++ +  E A  ++
Sbjct: 120 QKSYLTVFDILVEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLF 179

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M +RGC+PD   Y ++I+GLC  G + +A +L +EM   E    P V +Y  L++ LC
Sbjct: 180 REMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEM--EEKGLSPSVVSYTSLIHGLC 237

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           + +N+  +I+LL  M+  G +P++ T +  +           DG          L K   
Sbjct: 238 QSNNLDEAIELLEEMIINGIEPNVFTYSSLM-----------DG----------LCKSGH 276

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +S   +++EVM+++ L P   T+  ++  LC+  + + A+
Sbjct: 277 SSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAV 316



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 145/302 (48%), Gaps = 12/302 (3%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +F   P  G  Q    T+ +LI      G     + +L  M  +       S+  +    
Sbjct: 178 LFREMPNRGC-QPDSYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGL 236

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            +++ ++EAI L   M+     +  V +++S+++ + + G   +A+E    +V  +   +
Sbjct: 237 CQSNNLDEAIELLEEMIIN-GIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRR---L 292

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LPN +T++ +I  +C+ G    A+++   M ++  +PD   Y  ++ GLC      EA  
Sbjct: 293 LPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAAN 352

Query: 249 LLDEMQVDGCFPTPVTF-------NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            +DEM + G  P   ++       N+++ GLC N +  RA +L  +M  +G      T++
Sbjct: 353 FIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFD 412

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            L+   C +G+L+KA  +L+ M+   C+P+E  +  ++ GL    +  +   +L++  ++
Sbjct: 413 CLVKCFCKRGDLNKAARILEEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQ 472

Query: 362 KF 363
           KF
Sbjct: 473 KF 474


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  251 bits (642), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 226/401 (56%), Gaps = 2/401 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P  +TF  +I  +C++G    A++LF +M  R C PD+YTY T+++GLCK      
Sbjct: 162 LGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAA 221

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  LL +M+  GC P  VT++ +I+   K+  +  A  +   M +KG  P+  TYN+LI 
Sbjct: 222 AAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQ 281

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC      +A +LL+ M +   MP+ VT+  +++ + K G+  +   VL +M E     
Sbjct: 282 GLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEP 341

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   YS+L+ G     +  +A KL+  M+ KGCKP+   Y+ LI+G C+V + DEA+++ 
Sbjct: 342 DVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLF 401

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EMI+ G   N  +Y++L+ G  + G   +A  ++K+M  N  + N   YS+L+ G C+ 
Sbjct: 402 NEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQ 461

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G   +A  ++  M S   KP++V Y+ +I  +C +G++ +A KLF+E+       QP+  
Sbjct: 462 GYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFV--KGLQPNAQ 519

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            Y  ++N LCK+  +  +++   +M + GC PD ++ N+ +
Sbjct: 520 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVII 560



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/418 (33%), Positives = 224/418 (53%), Gaps = 6/418 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG-LVDNAIQLFREMPVRNCEPDIYTYC 231
           AL  +NH++   H   LP  + F  ++  + ++G   D  I L ++M +    P+IYT  
Sbjct: 81  ALASFNHML---HRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLS 137

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L++      R+D A  +L ++   G  PT VTF  LIN LCK G+  +A +L D+M  +
Sbjct: 138 ILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVAR 197

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           GC P+  TY T+I+GLC  G    A  LL +M  + C PN VTY TII+   K  R  + 
Sbjct: 198 GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEA 257

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +   M+ +    + + Y++LI GL    + ++A  L  +M      P+ V ++ L+D 
Sbjct: 258 LDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDT 317

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           +C+ GK  EA+ +L  M   G   +  TYSSLM G+    +  +A +++  M    C  +
Sbjct: 318 ICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPD 377

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y++LI+G C+  ++ EA+ ++ +M+ +G  P+ V+Y+++IHGLC  GS+ EA  LF 
Sbjct: 378 VFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFK 437

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            M      + P++FTY+ILL+  CKQ     +  L  +M      P+LV  NI + A+
Sbjct: 438 NM--HTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAM 493



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 202/398 (50%), Gaps = 4/398 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A+ LF  MV    C+  V ++ +++N + + G    A      +  A      PN +T+
Sbjct: 186 QAMELFDDMVAR-GCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEA---GCQPNVVTY 241

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           + +I +  +   V+ A+ +F  M V+   PDI+TY +L+ GLC  ++  EA  LL+EM+ 
Sbjct: 242 STIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRS 301

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
               P  VTFNVL++ +CK G++  A  ++  M   G  P+ VTY++L++G  L+  + +
Sbjct: 302 LNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVE 361

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  L D M+   C P+  +Y  +ING  K+ R  +  ++   M  +    N   Y+TLI 
Sbjct: 362 ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIH 421

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL + G   +A  L+K M   G  PN   YS L+DG C+ G   +A  +   M +     
Sbjct: 422 GLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKP 481

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N   Y+ L+    +SG    A +++ ++       N   Y+ +I+GLC++G L EA   +
Sbjct: 482 NLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAF 541

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             M   GC PD ++Y+ +I G  +      A++L  EM
Sbjct: 542 RNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEM 579



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 189/363 (52%), Gaps = 3/363 (0%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           ++E  C+  V +++++++   ++   + AL+ ++++   K   I P+  T+N +I+ +C 
Sbjct: 229 MEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYM---KVKGISPDIFTYNSLIQGLCN 285

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
                 A  L  EM   N  PDI T+  L+D +CKE ++ EA  +L  M   G  P  VT
Sbjct: 286 FSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT 345

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ L+ G     E+  A KL D M  KGC P+  +YN LI+G C    +D+A  L + M+
Sbjct: 346 YSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMI 405

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PN V+Y T+I+GL +LG   +   +  +M       N + YS L+ G  K+G   
Sbjct: 406 HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFG 465

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A +L++ M     KPN V+Y+ LID +C+ G   +A ++  E+   G   NA  Y++++
Sbjct: 466 KAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTII 525

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  + G   +A+E +++M ++ C  +E+ Y+V+I G         A  +  +M  +G  
Sbjct: 526 NGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFI 585

Query: 505 PDV 507
            DV
Sbjct: 586 ADV 588



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 169/351 (48%), Gaps = 39/351 (11%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  ++ K   V EA+ +F  M  +      + ++NS++  +     +  A    N +   
Sbjct: 244 IIDSHRKDRRVNEALDIFSYMKVK-GISPDIFTYNSLIQGLCNFSQWKEASALLNEM--- 299

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAI------------------------------- 212
           + +NI+P+ +TFN+++ T+C+ G V  A                                
Sbjct: 300 RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEV 359

Query: 213 ----QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
               +LF  M  + C+PD+++Y  L++G CK  R+DEA  L +EM   G  P  V++N L
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+GLC+ G L  A  L  NM   G LPN  TY+ L+ G C +G   KA  L   M ++  
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            PN V Y  +I+ + K G   D  ++   +  +    N  IY+T+I+GL KEG  ++A++
Sbjct: 480 KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALE 539

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            ++ M E GC P+ + Y+ +I G         A +++ EM + G  A+  T
Sbjct: 540 AFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 173/348 (49%), Gaps = 24/348 (6%)

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVN 366
           C   N+D A++  + M+  K +P  + +  +++ +VK+G+  D    L   ME      N
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            Y  S LI+      + + A  +  ++++ G +P  V ++ LI+ LC+VGK  +A E+  
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +M+  GC  + +TY++++ G  + G+   A  + K M +  C  N V YS +I    +D 
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           ++ EA  +++ M  +G  PD+  Y+S+I GLCN    +EA  L NEM  L     PD+ T
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLN--IMPDIVT 310

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           +N+L++ +CK+  +S +  +L +M + G +PD+VT +  +     + E  +         
Sbjct: 311 FNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVE--------- 361

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                         K+ + M+ K   P   ++  ++   C+ KRI  A
Sbjct: 362 ------------ARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEA 397



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 112/244 (45%), Gaps = 39/244 (15%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +   Y K   ++EA +LF+ M+                                  
Sbjct: 380 SYNILINGYCKVKRIDEAKQLFNEMI---------------------------------- 405

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
                H  + PN +++N +I  +C+LG +  A  LF+ M      P+++TY  L+DG CK
Sbjct: 406 -----HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCK 460

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +    +A  L   MQ     P  V +N+LI+ +CK+G L  A KL   +F+KG  PN   
Sbjct: 461 QGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQI 520

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y T+I+GLC +G LD+A+     M    C P+E++Y  II G +         +++  M 
Sbjct: 521 YTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMR 580

Query: 360 ERKF 363
           ++ F
Sbjct: 581 DKGF 584


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 178/670 (26%), Positives = 303/670 (45%), Gaps = 105/670 (15%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SL++  A    FK +E +L  M+ ++ +   ++  F+  AY  + LV+EA+ L++T++D 
Sbjct: 101 SLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDV 160

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
            +C   V + NS+LN+++  G    A + Y+ +V+    N   +  T  +V K +C+ G 
Sbjct: 161 HNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDR---NGDVDNYTVCIVTKGLCKEGK 217

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V+    L  +   + C P+I  Y TL+DG CK   ++ A LL  E++V G  PT  T+  
Sbjct: 218 VEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGA 277

Query: 268 LINGLCKNGELG-----------------------------------RAAKLVDNMFLKG 292
           +IN  CK G+                                      AA  V  M   G
Sbjct: 278 MINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESG 337

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C P+  TYNTLI+G C KG + +A  LL+  +     PN+ +Y  +I+   K G  V  +
Sbjct: 338 CEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRAS 397

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L+ M ER   ++   Y  L+ GL   G+ + A+ +  +MME+G  P+  +Y+ L+ GL
Sbjct: 398 ELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGL 457

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK----------- 461
           C+ G+   A+++L EM++     +AF  ++L+ GF   G   +A ++++           
Sbjct: 458 CKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSV 517

Query: 462 ----DMAKNNCVY--------------------NEVCYSVLIHGLCEDGKLREARMVWTQ 497
                M K  C Y                    +E  YS +I G  +   LR A  ++  
Sbjct: 518 VECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGL 577

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           ML + CKP+VV ++S+I+G C  G +  A K+F EM       +P+V TY IL+   CK+
Sbjct: 578 MLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSF--GFEPNVVTYTILIGYFCKE 635

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL----------KEKLEAP----------- 596
             ++ +      M+   C P+  T N  +  L          K     P           
Sbjct: 636 GKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMI 695

Query: 597 QDGTDF----LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
            DG D+     N + + L + +      ++ + M+ K   P   ++  ++  LC   R+Q
Sbjct: 696 SDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQ 755

Query: 653 AAINKCWSNL 662
                 W+N+
Sbjct: 756 D-----WNNV 760



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 137/267 (51%), Gaps = 11/267 (4%)

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N +IK  C+ G++++A+  F+ M      PD +TY T++DG  K+N L  A+ +   M  
Sbjct: 521 NAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLK 580

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
             C P  VTF  LING C+NG+L RA K+ + M   G  PN VTY  LI   C +G L K
Sbjct: 581 KTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTK 640

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGL-----VKLGRAVDGARVLMSMEERKFHVNE--- 367
           A    ++M+ +KC+PN+ T+  ++NGL     + +      ++  +++E     +++   
Sbjct: 641 ACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDGWD 700

Query: 368 ---YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
                Y++++  L +    + A++L  +MM KG  P+ V + AL+ GLC  G+  +   +
Sbjct: 701 WRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWNNV 760

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESG 451
           +    N      A  YS  +  F   G
Sbjct: 761 IPCNFNERQLQIAVKYSEKLDQFLSEG 787



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/283 (21%), Positives = 109/283 (38%), Gaps = 50/283 (17%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           ++I+ Y   G      +   RM        E ++  I   Y K + +  A+R+F  M+ +
Sbjct: 522 AMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKK 581

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
             CK  V +F S++N   + G  +RA + +  +   +     PN +T+ ++I   C+ G 
Sbjct: 582 -TCKPNVVTFTSLINGFCRNGDLNRAEKVFEEM---RSFGFEPNVVTYTILIGYFCKEGK 637

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGL------------------------------ 237
           +  A   F +M +  C P+  T+  L++GL                              
Sbjct: 638 LTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISD 697

Query: 238 ----------------CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
                           C+   +  A+ L D+M   G  P PV+F  L++GLC  G L   
Sbjct: 698 GWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDW 757

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
             ++   F +  L   V Y+  +     +G    A  LL  +V
Sbjct: 758 NNVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTLV 800


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  251 bits (642), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 151/507 (29%), Positives = 264/507 (52%), Gaps = 46/507 (9%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           ++F ++  +Y +A  +  A+R+  TM+ +   +  +   N+ ++V++      +A+ F  
Sbjct: 233 EAFGYVMVSYSRAGKLRNAMRVL-TMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLE 291

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +   + + I PN +T+N +IK  C L  +++A++L  EMP + C PD  +Y T+M  LC
Sbjct: 292 RM---QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLC 348

Query: 239 KENRLDEAVLLLDEMQVDG-CFPTPVTFN------------------------------- 266
           KE R+ E  LL+++M  D    P  VT+N                               
Sbjct: 349 KEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDK 408

Query: 267 ----VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
                +++  C+ G + +A ++V+ MF KGC+P+ VTY ++I+GLC +  +D+A  +L +
Sbjct: 409 VGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQ 468

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV-NEYIYSTLISGLFKEG 381
           M    C PN V+Y  ++NGL K G +++ AR +M+M E  + + N   YS L+ G  +EG
Sbjct: 469 MYKHGCKPNTVSYTALLNGLCKNGNSLE-AREMMNMSEEDWWIPNAITYSVLMHGFRREG 527

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K+ +A  L ++M++KG  P  V  + LI  LC+  K DEA+  + + +NNGCA N   ++
Sbjct: 528 KSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFT 587

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +++ GF +      A+ +  DM  +N   + V Y+ +I  L + G++ EA  +  +ML  
Sbjct: 588 TVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 647

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G  P  V Y ++IH  C  G VE+ LKL  +ML      Q     YN ++  LC   N+ 
Sbjct: 648 GLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKML----SRQECRTAYNQVIEKLCSFGNLE 703

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            +  LL  ++      D  TC++ + +
Sbjct: 704 QAYKLLGKVLRTASKIDANTCHMLIES 730



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 235/460 (51%), Gaps = 24/460 (5%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            F  V+ +  R G + NA+++   M     EPD+    T +  L   NRLD+AV  L+ M
Sbjct: 234 AFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERM 293

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           Q+    P  +T+N LI G C    L  A +L+  M  KGC P++++Y T++  LC +  +
Sbjct: 294 QIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRI 353

Query: 314 DKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
            +   L+++M+  S  +P++VTY T ++ L K G   +    L   EER+F V++  YS 
Sbjct: 354 KEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSA 413

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           ++    +EG+ + A ++  +M  KGC P+ V Y+++I+GLC+  K D+A+++L +M  +G
Sbjct: 414 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 473

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C  N  +Y++L+ G  ++G   +A E+     ++  + N + YSVL+HG   +GK  EA 
Sbjct: 474 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEAC 533

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M+ +G  P  V  + +I  LC    V+EA +   +  CL      +V  +  +++
Sbjct: 534 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQ--CLNNGCAVNVVNFTTVIH 591

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             C++ ++  ++ LL+ M      PD+VT    + AL                      K
Sbjct: 592 GFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALG---------------------K 630

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           + R     K+   ML+  L P   T+  V+ + CR  R++
Sbjct: 631 KGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVE 670



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 169/329 (51%), Gaps = 3/329 (0%)

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
           P  F  ++    + G+L  A +++  M   G  P+    NT IH L +   LDKAV  L+
Sbjct: 232 PEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLE 291

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           RM   +  PN +TY  +I G   L R  D   ++  M  +    ++  Y T++  L KE 
Sbjct: 292 RMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEK 351

Query: 382 KAEDAMKLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           + ++   L ++M+ +    P+ V Y+  +  L + G  DEA E L E        +   Y
Sbjct: 352 RIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGY 411

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           S+++  F   G+  KA EI  +M    C+ + V Y+ +I+GLC++ K+ +A+ +  QM  
Sbjct: 412 SAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYK 471

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            GCKP+ V+Y+++++GLC  G+  EA ++ N  +  E    P+  TY++L++   ++   
Sbjct: 472 HGCKPNTVSYTALLNGLCKNGNSLEAREMMN--MSEEDWWIPNAITYSVLMHGFRREGKS 529

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           S + DL+  M+ +G  P  V  N+ + +L
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSL 558



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 102/444 (22%), Positives = 183/444 (41%), Gaps = 79/444 (17%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK----SFIFIFKAYGKAHLVEEAIRL 140
           ++Y+++         K + +++ +M ++  ++ ++    +F+ +   +G     +EA+  
Sbjct: 339 SYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHG---DEALE- 394

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F    +E   +     ++++++   +EG   +A E  N + +      +P+ +T+  VI 
Sbjct: 395 FLREAEERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSK---GCIPDVVTYTSVIN 451

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK--------------------- 239
            +C+   VD A ++ R+M    C+P+  +Y  L++GLCK                     
Sbjct: 452 GLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIP 511

Query: 240 --------------ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
                         E +  EA  L+ EM   G FPTPV  N+LI  LC+  ++  A + +
Sbjct: 512 NAITYSVLMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFM 571

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
           +     GC  N V + T+IHG C K +L+ A+SLLD M  S   P+ VTY TII+ L K 
Sbjct: 572 EQCLNNGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKK 631

Query: 346 GRAVDGARVLMSMEE------------------RKFHVNEYI---------------YST 372
           GR  +  ++ M M                    R   V + +               Y+ 
Sbjct: 632 GRIEEATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQECRTAYNQ 691

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +I  L   G  E A KL  +++    K +      LI+     G P  +  +   M N  
Sbjct: 692 VIEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRN 751

Query: 433 CAANAFTYSSLMKGFFESGKGHKA 456
              +      + K     GK  +A
Sbjct: 752 LIPDLKLCEKVSKKLMLEGKSEEA 775



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 11/274 (4%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
           F+  GK+    EA  L   M+ +      V+  N ++  + QE     A  F    +N  
Sbjct: 523 FRREGKS---SEACDLVREMIKKGFFPTPVE-INLLIQSLCQEEKVDEAKRFMEQCLNN- 577

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
                 N + F  VI   C+   ++ A+ L  +M + N  PD+ TY T++D L K+ R++
Sbjct: 578 --GCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIE 635

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTL 303
           EA  L  +M   G  PTPVT+  +I+  C+ G +    KL++ M  +  C      YN +
Sbjct: 636 EATKLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSRQEC---RTAYNQV 692

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  LC  GNL++A  LL +++ +    +  T   +I   +  G  +    V   M  R  
Sbjct: 693 IEKLCSFGNLEQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNL 752

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
             +  +   +   L  EGK+E+A KL  + +E+G
Sbjct: 753 IPDLKLCEKVSKKLMLEGKSEEADKLILRFVERG 786


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 150/464 (32%), Positives = 234/464 (50%), Gaps = 16/464 (3%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +F    ++  +N+++N + ++G    A   +N   N  H  + PN +T++++I + C+
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFN---NMGHKGLFPNDVTYSILIDSFCK 402

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +D A+    +M     +  +Y Y +L+ G CK  +L  A  L DEM  +G  P  V 
Sbjct: 403 RGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVI 462

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+G CK GEL  A +L   M  KG  PN  T+  LI GLC    + +A  L   MV
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +PNEVTY  +I G  K G  V    +L  M E+    + Y Y  LISGL   G+  
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 385 DAMKLWKQMMEK--------GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           +A +    +  +        GC PN V Y+ALI+GLC++G  D+AE +  EM+ +    N
Sbjct: 583 EAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN 642

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY+  +      G   KA+++  D+     + N V Y++LI G C+ G+++EA  V  
Sbjct: 643 QNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLV 701

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M+  G  PD ++YS++I+  C  G ++EA+KL+  ML       PD   YN L+   C 
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML--NRGVNPDTVAYNFLIYGCCV 759

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCN--IFLTALKEKLEAPQD 598
              ++ + +L + MM RG  P+  T N  I  T L   + +  D
Sbjct: 760 TGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 803



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 242/488 (49%), Gaps = 20/488 (4%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N+ I+ +C+   V  A+++   +  +    D+ TYCTL+ GLCK    +    +++EM
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P+    + L++GL K G +G A  LV+ +   G  P+   YN LI+ +C  G L
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A SL + M      PN+VTY  +I+   K G+       L  M E       Y YS+L
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ISG  K GK   A  L+ +M+  G KPN V+Y++LI G C+ G+   A  +  EM   G 
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           + N +T+++L+ G   + +  +A +++ +M + N + NEV Y+VLI G C++G    A  
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ------PDVFTY 547
           +  +M+ +G  PD   Y  +I GLC+ G V EA +  N++   + K        P+V TY
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTY 611

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAPQDGTDFLNE 605
             L+N LCK   +  +  L   M+     P+  T   FL  L  +  +E      D L E
Sbjct: 612 TALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE 671

Query: 606 ----------LAIRLF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                     + IR F K  R     +++  M+   +SP   ++  ++ E CR   ++ A
Sbjct: 672 GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEA 731

Query: 655 INKCWSNL 662
           I K W ++
Sbjct: 732 I-KLWESM 738



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 237/503 (47%), Gaps = 22/503 (4%)

Query: 39  FSVRSAVSSNKQMETEPQGNAKSEQPFSDEI--FNSTPKLGSYQLGDSTFYSLIQHYANS 96
           F    A  SN       +GN  S     +++  F   P L  Y        +LI      
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN-------ALINSMCKD 368

Query: 97  GDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKS 156
           G     E +   M  +     + ++  +  ++ K   ++ A+     M  E   K TV  
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT-EVGIKATVYP 427

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           ++S+++   + G    A   ++ ++      + PN + +  +I   C+ G + NA +L+ 
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIAN---GLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM  +   P+ YT+  L+ GLC  NR+ EA  L  EM      P  VT+NVLI G CK G
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG 544

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK--------C 328
              RA +L+D M  KG +P+  TY  LI GLC  G + +A   ++ +   +        C
Sbjct: 545 NTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGC 604

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
           +PN VTY  +INGL K+G       +   M       N+  Y+  +  L  EG  E A++
Sbjct: 605 LPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 664

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L   ++E G   NTV Y+ LI G C++G+  EA E+L  MI++G + +  +YS+++  + 
Sbjct: 665 LHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYC 723

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             G   +A+++W+ M       + V Y+ LI+G C  G+L +A  +   M+ RG KP+  
Sbjct: 724 RRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRA 783

Query: 509 AYSSMIHGLCNAGSVEEALKLFN 531
            Y+S+IHG C   SV      F+
Sbjct: 784 TYNSLIHGTCLMSSVSSTADYFS 806



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/478 (28%), Positives = 225/478 (47%), Gaps = 32/478 (6%)

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           ++ +   K   + P+   +N +I ++C+ G +D A  LF  M  +   P+  TY  L+D 
Sbjct: 340 FDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDS 399

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            CK  +LD A+  L +M   G   T   ++ LI+G CK G+L  A  L D M   G  PN
Sbjct: 400 FCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPN 459

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            V Y +LI G C +G L  A  L   M      PN  T+  +I+GL    R  +  ++  
Sbjct: 460 VVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFG 519

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M E     NE  Y+ LI G  KEG    A +L  +M+EKG  P+T  Y  LI GLC  G
Sbjct: 520 EMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTG 579

Query: 417 KPDEAEEILFEMINN--------GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           +  EA E + ++           GC  N  TY++L+ G  + G   KA  + ++M  +N 
Sbjct: 580 RVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNS 639

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           + N+  Y+  +  L  +G + +A  +   +L  G   + V Y+ +I G C  G ++EA +
Sbjct: 640 LPNQNTYACFLDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAE 698

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +   M+  +    PD  +Y+ ++   C++ ++  +I L  SM++RG +PD V  N  +  
Sbjct: 699 VLVNMI--DSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIY- 755

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                     G     EL          +  F++ + M+++ + P  +T+  ++   C
Sbjct: 756 ----------GCCVTGEL----------TKAFELRDDMMRRGVKPNRATYNSLIHGTC 793



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 257/574 (44%), Gaps = 51/574 (8%)

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHLVEE-----------AIRLFHTMVDEFHCKRTV 154
           + R  +  RV L  SFI       K H VE+           A+R F+ +    +   + 
Sbjct: 37  IVRGNQSWRVALNNSFI---SQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHST 93

Query: 155 KSFNSVLNVIIQEGLYHRALE--------------FYNHIVNAKHMNILPNTLTFNLVIK 200
            SF  +++ ++Q  LY  A                 +   +++        TL F+L+I+
Sbjct: 94  TSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQ 153

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
           T  +     + + + R M      P I T   +++GL +  +   A+ L DE+   G  P
Sbjct: 154 TYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRP 213

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
               +  ++  LC+  +  RA +++  M   GC  +  TYN  I GLC    + +AV + 
Sbjct: 214 DVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIK 273

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + +       +  TY T++ GL K+     G  ++  M E  F  +E   S L+ GL K+
Sbjct: 274 NLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKK 333

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G    A  L  ++ + G  P+  VY+ALI+ +C+ GK DEAE +   M + G   N  TY
Sbjct: 334 GNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           S L+  F + GK   A+     M +         YS LI G C+ GKLR A+ ++ +M++
Sbjct: 394 SILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G KP+VV Y+S+I G C  G +  A +L++EM        P+ +T+  L++ LC  + +
Sbjct: 454 NGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM--TGKGISPNTYTFTALISGLCHANRM 511

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
           + +  L   M++    P+ VT N+ +                         K   T   F
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEG---------------------HCKEGNTVRAF 550

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           ++++ M++K L P T T+  ++  LC   R+  A
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 243/465 (52%), Gaps = 11/465 (2%)

Query: 126 KAYGKAHLVEEAIRLFH-TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
           KA     ++E+   L H + + E       +  N ++++ + +     A++ +  ++ ++
Sbjct: 40  KASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVND-----AIDLFESMIQSR 94

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
               LP  + FN +   V R    D  +   + M +   E D+YT   +++  C++ +L 
Sbjct: 95  P---LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 151

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            A  +L      G  P  +TF+ L+NG C  G +  A  LVD M      P+ VT +TLI
Sbjct: 152 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 211

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +GLCLKG + +A+ L+DRMV     P+EVTYG ++N L K G +     +   MEER   
Sbjct: 212 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 271

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   YS +I  L K+G  +DA+ L+ +M  KG K + V YS+LI GLC  GK D+  ++
Sbjct: 272 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 331

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L EMI      +  T+S+L+  F + GK  +A E++ +M       + + Y+ LI G C+
Sbjct: 332 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 391

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +  L EA  ++  M+S+GC+PD+V YS +I+  C A  V++ ++LF E+        P+ 
Sbjct: 392 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI--SSKGLIPNT 449

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            TYN L+   C+   ++ + +L   M+ RG  P +VT  I L  L
Sbjct: 450 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 494



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 160/536 (29%), Positives = 267/536 (49%), Gaps = 48/536 (8%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRM---RREKRVV 116
           K +  F+  +     KLG Y+    TF +L+  +   G       ++ RM   ++   +V
Sbjct: 147 KKKLLFAFSVLGRAWKLG-YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 205

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
              + I      G+   V EA+ L   MV E+  +    ++  VLN + + G    AL+ 
Sbjct: 206 TVSTLINGLCLKGR---VSEALVLIDRMV-EYGFQPDEVTYGPVLNRLCKSGNSALALDL 261

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           +  +   +  NI  + + +++VI ++C+ G  D+A+ LF EM ++  + D+ TY +L+ G
Sbjct: 262 FRKM---EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC + + D+   +L EM      P  VTF+ LI+   K G+L  A +L + M  +G  P+
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            +TYN+LI G C +  L +A  + D MV+  C P+ VTY  +IN   K  R         
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV-------- 430

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
                                      +D M+L++++  KG  PNT+ Y+ L+ G C+ G
Sbjct: 431 ---------------------------DDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 463

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K + A+E+  EM++ G   +  TY  L+ G  ++G+ +KA+EI++ M K+        Y+
Sbjct: 464 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 523

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           ++IHG+C   K+ +A  ++  +  +G KPDVV Y+ MI GLC  GS+ EA  LF +M   
Sbjct: 524 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK-- 581

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           E    PD FTYNIL+ A    S +  S++L+  M   G   D  T  + +  L ++
Sbjct: 582 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 637



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 10/204 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           + +  F   GK +  +E   LF  MV       +V ++  +L+ +   G  ++ALE +  
Sbjct: 454 TLVLGFCQSGKLNAAKE---LFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEK 509

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  ++   +      +N++I  +C    VD+A  LF  +  +  +PD+ TY  ++ GLCK
Sbjct: 510 MQKSR---MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 566

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +  L EA +L  +M+ DGC P   T+N+LI        L  + +L++ M + G   +  T
Sbjct: 567 KGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 626

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRM 323
              +I  L  +  LDK  S LD +
Sbjct: 627 IKMVIDMLSDR-RLDK--SFLDML 647


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 166/539 (30%), Positives = 271/539 (50%), Gaps = 21/539 (3%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
            Y K H + +A ++F  M  E  C R   S+ ++++   + G    ALE +      K  
Sbjct: 234 GYCKIHELGDAYKVFEIMPQE-GCLRNEVSYTNLIHGFCEVGKIDEALELF---FQMKED 289

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
              P+  T+ +++   C +G    A++ F EM     EP++YTY  L+D  CK  ++DE 
Sbjct: 290 GCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEG 349

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + +L  M   G   + V FN LI+G CK G +  A  ++D+M L    PN  TYN LI G
Sbjct: 350 MEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICG 409

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFHV 365
            C K ++D+A++LL++M  +K  PN VTY T+I+GL K  R VD A R+   M +  F  
Sbjct: 410 FCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCK-ARVVDSAWRLHHLMIKDGFVP 468

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           ++  +   I  L K GK E A ++++ + EK  + N  +Y+ALIDG C+  K  +A  + 
Sbjct: 469 DQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLF 528

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M+  GC  N+ T++ L+ G  + GK   A+ +   M K +       Y++LI  +  +
Sbjct: 529 KRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRE 588

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP--- 542
                A M   QM+S GC+P+VV Y++ I   C  G + EA     E + ++ K +    
Sbjct: 589 SDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA-----EEMVVKIKEEGILL 643

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK-EKLEAPQDGTD 601
           D F Y++L+NA      +  +  +L  M D GC+P   T +I L  L  EK      G D
Sbjct: 644 DSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLD 703

Query: 602 FLNELAIRLFKRQRTS-GGFKIVEVMLQKFLS----PQTSTWERVVQELCRPKRIQAAI 655
            LN   I +          F+I+ ++ +K +     P  +T+ ++++ LC+ + +  A 
Sbjct: 704 -LNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAF 761



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 227/455 (49%), Gaps = 21/455 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           VE  +  F+TMV+  HCK        + NV++ +  +   ++F              ++ 
Sbjct: 186 VEPNLISFNTMVNA-HCK--------IGNVVVAKAYFCGLMKF----------GFCCDSF 226

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  +I   C++  + +A ++F  MP   C  +  +Y  L+ G C+  ++DEA+ L  +M
Sbjct: 227 TYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQM 286

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           + DGCFP   T+ VL+   C+ G+   A K  + M   G  PN  TY  LI   C  G +
Sbjct: 287 KEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKM 346

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+ + +L  M+    + + V +  +I+G  K G   D   VL SM+  K   N   Y+ L
Sbjct: 347 DEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNEL 406

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I G  ++   + AM L  +M E    PN V Y+ LI GLC+    D A  +   MI +G 
Sbjct: 407 ICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGF 466

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  T+ + +    + GK  +A ++++ + + +   NE  Y+ LI G C+  K  +A +
Sbjct: 467 VPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHL 526

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +ML  GC P+ + ++ ++ GL   G VE+A+ L + M   + K  P V TY IL+  
Sbjct: 527 LFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAK--PTVHTYTILIEE 584

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           + ++S+   +   L+ M+  GC P++VT   F+ A
Sbjct: 585 ILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKA 619



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 242/531 (45%), Gaps = 30/531 (5%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA--------------KHMNILPNTLTFNL 197
            TV S+  +L ++++ G    A    N ++ +               H     +  ++N 
Sbjct: 101 HTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNR 160

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +   + R GL+D    LF++M     EP++ ++ T+++  CK   +  A      +   G
Sbjct: 161 LFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFG 220

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
                 T+  LI G CK  ELG A K+ + M  +GCL NEV+Y  LIHG C  G +D+A+
Sbjct: 221 FCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEAL 280

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            L  +M    C P+  TY  ++    ++G+  +  +    M E     N Y Y+ LI   
Sbjct: 281 ELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYF 340

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K GK ++ M++   M+EKG   + V ++ALIDG C+ G  ++A  +L  M  N    N+
Sbjct: 341 CKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNS 400

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY+ L+ GF       +A+ +   M +N    N V Y+ LIHGLC+   +  A  +   
Sbjct: 401 RTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHL 460

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M+  G  PD   + + I  LC  G VE+A ++F  +   E  ++ + F Y  L++  CK 
Sbjct: 461 MIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESL--KEKHAEANEFLYTALIDGYCKA 518

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQDGTDFLNELAIR------ 609
              S +  L   M+  GC P+ +T N+ L  L++  K+E      D + +   +      
Sbjct: 519 EKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTY 578

Query: 610 --LFKRQRTSGGFKIVEVMLQKFLS----PQTSTWERVVQELCRPKRIQAA 654
             L +       F    + L + +S    P   T+   ++  CR  R+  A
Sbjct: 579 TILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA 629



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 126/505 (24%), Positives = 224/505 (44%), Gaps = 65/505 (12%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           F +LI  Y   G  +    VL  M+  K     +++  +   + +   ++ A+ L + M 
Sbjct: 368 FNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMY 427

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E      + ++N++++ + +  +   A   ++ ++       +P+  TF   I  +C++
Sbjct: 428 -ENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD---GFVPDQRTFCAFIDCLCKM 483

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G V+ A Q+F  +  ++ E + + Y  L+DG CK  +  +A LL   M  +GCFP  +TF
Sbjct: 484 GKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITF 543

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           NVL++GL K G++  A  LVD M      P   TY  LI  +  + + D+A   LD+M++
Sbjct: 544 NVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMIS 603

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI---------------- 369
           S C PN VTY   I    + GR ++   +++ ++E    ++ +I                
Sbjct: 604 SGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDS 663

Query: 370 -------------------YSTLISGLFKEGKAEDAMKL--------------WK----- 391
                              YS L+  L  E   ++ M L              WK     
Sbjct: 664 AFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFE 723

Query: 392 -------QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
                  +M+E+GC PN   YS LI GLC+V     A  +   M  +G + +   ++SL+
Sbjct: 724 IITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLL 783

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
               + G   +A+ +   M + N + +   Y +L+ GL E G   +A  ++  +LS G  
Sbjct: 784 SSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYN 843

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKL 529
            D V +  ++ GL   G V+E  +L
Sbjct: 844 YDEVVWKVLLDGLVRKGYVDECSQL 868



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 174/384 (45%), Gaps = 30/384 (7%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +LI  Y  +  F    ++  RM  E       +F  +     K   VE+A+ L   M 
Sbjct: 508 YTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM- 566

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            +F  K TV ++  ++  I++E  + RA  F + ++++      PN +T+   IK  CR 
Sbjct: 567 GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISS---GCQPNVVTYTAFIKAYCRQ 623

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G +  A ++  ++       D + Y  L++      +LD A  +L  M   GC P+  T+
Sbjct: 624 GRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTY 683

Query: 266 NVLINGL--------------------CKNGELGRAAK------LVDNMFLKGCLPNEVT 299
           ++L+  L                      N  + + A       L + M  +GC+PN  T
Sbjct: 684 SILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNT 743

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+ LI GLC   +L  A  L + M  S   P+E  + ++++   KLG   +  R+L SM 
Sbjct: 744 YSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMM 803

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E     +   Y  L+ GLF++G  E A ++++ ++  G   + VV+  L+DGL R G  D
Sbjct: 804 EYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVD 863

Query: 420 EAEEILFEMINNGCAANAFTYSSL 443
           E  ++   M   GC  ++ T++ L
Sbjct: 864 ECSQLRDIMEKTGCRLHSDTHTML 887



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/410 (23%), Positives = 173/410 (42%), Gaps = 30/410 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF + I      G  +    V   ++ +     E  +  +   Y KA    +A  LF  M
Sbjct: 472 TFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRM 531

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E  C     +FN +L+ + +EG    A+   +  V  K  +  P   T+ ++I+ + R
Sbjct: 532 LFE-GCFPNSITFNVLLDGLRKEGKVEDAMSLVD--VMGK-FDAKPTVHTYTILIEEILR 587

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               D A     +M    C+P++ TY   +   C++ RL EA  ++ +++ +G       
Sbjct: 588 ESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFI 647

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK-------------- 310
           ++VL+N     G+L  A  ++  MF  GC P+  TY+ L+  L  +              
Sbjct: 648 YDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNST 707

Query: 311 ------------GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
                        + +    L ++MV   C+PN  TY  +I GL K+       R+   M
Sbjct: 708 NISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHM 767

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           +E     +E I+++L+S   K G  E+A++L   MME     +   Y  L+ GL   G  
Sbjct: 768 KESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQ 827

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           ++AEEI   +++ G   +   +  L+ G    G   +  ++   M K  C
Sbjct: 828 EKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGC 877


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  251 bits (641), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 146/446 (32%), Positives = 242/446 (54%), Gaps = 9/446 (2%)

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+D+  C+    +F  +L  + +     +A +    +   K M  +P+   +N +I    
Sbjct: 1   MIDK-SCQPDAFTFAILLRGLCRSNQLEKARQLLGRM---KEMGCVPDDAIYNALISGYS 56

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +      A +   EM   +C P + TY  ++DGLCK  R  +AV LLDEM+  GC P   
Sbjct: 57  KAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIY 116

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+NV++ GLC+  +L  A K+++ M ++G  P+ VTYN+ I GLC    +D+A   L RM
Sbjct: 117 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 176

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             +   P+ V+Y T+INGL K G     +R+L  M  R    +   YS+LI G  K G+ 
Sbjct: 177 PVT---PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEV 233

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E AM L   M++ GC+PN V Y++L+  L R+G   +AE++L EM   G   +  +Y++ 
Sbjct: 234 ERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNAC 293

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  ++ +  KA  ++  M +  C  N   YS+L+  LC+  +L +A  +  Q   +  
Sbjct: 294 IDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQ 353

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             D++ Y+ ++ GLC  G  +EA  LF+++L  E   +PDVF YN++L++ CK+  I  +
Sbjct: 354 IVDILLYTVLLDGLCKGGRFDEACALFSKVL-DEKICEPDVFFYNVMLDSHCKRRQIDKA 412

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + +   M++R C  ++VT NI +  L
Sbjct: 413 LQIHKQMLERNC-CNVVTWNILVHGL 437



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 148/506 (29%), Positives = 266/506 (52%), Gaps = 11/506 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  L++    S   +    +L RM+    V  +  +  +   Y KA    +A +    M
Sbjct: 12  TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V   HC  TV ++ ++++ + + G    A++  + +   +     PN  T+N++++ +C 
Sbjct: 72  VKN-HCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEM---RDKGCSPNIYTYNVIVEGLCE 127

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A ++  EM VR   PD+ TY + + GLCK +R+DEA   L  M V    P  V+
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVS 184

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +INGLCK+G+L  A++++D M  +GC P+ VTY++LI G C  G +++A+ LLD M+
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C PN V Y +++  L +LG       +L+ ME R F  +   Y+  I GL K  + +
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A  ++ +M+E+GC PN   YS L++ LC+  + D+A  ++ +        +   Y+ L+
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364

Query: 445 KGFFESGKGHKAVEIW-KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
            G  + G+  +A  ++ K + +  C  +   Y+V++   C+  ++ +A  +  QML R C
Sbjct: 365 DGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC 424

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             +VV ++ ++HGLC    + +A  +   M+  +    PD  TY  L++A+CK    + +
Sbjct: 425 -CNVVTWNILVHGLCVDDRLSDAETMLLTMV--DEGFIPDFVTYGTLVDAMCKCGKSAAA 481

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
           ++L    +  GC PD+VT +  +T L
Sbjct: 482 LELFEEAVKGGCVPDVVTYSALITGL 507



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 254/491 (51%), Gaps = 12/491 (2%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D+ + +LI  Y+ + DF      L  M +   +    ++  I     KA   ++A++L  
Sbjct: 45  DAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLD 104

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M D+  C   + ++N ++  + +E     A +    +    +    P+ +T+N  IK +
Sbjct: 105 EMRDK-GCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGY---FPDVVTYNSFIKGL 160

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+   VD A +    MPV    PD+ +Y T+++GLCK   LD A  +LD+M   GC P  
Sbjct: 161 CKCDRVDEARKFLARMPV---TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDV 217

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT++ LI+G CK GE+ RA  L+D+M   GC PN V YN+L+  L   G++ KA  +L  
Sbjct: 218 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 277

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M      P+ V+Y   I+GL K  R      V   M ER    N   YS L+  L K+ +
Sbjct: 278 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKE 337

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYS 441
            +DA+ L +Q  EK    + ++Y+ L+DGLC+ G+ DEA  +  ++++   C  + F Y+
Sbjct: 338 LDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYN 397

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            ++    +  +  KA++I K M + NC  N V +++L+HGLC D +L +A  +   M+  
Sbjct: 398 VMLDSHCKRRQIDKALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDE 456

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G  PD V Y +++  +C  G    AL+LF E   ++    PDV TY+ L+  L  + N++
Sbjct: 457 GFIPDFVTYGTLVDAMCKCGKSAAALELFEEA--VKGGCVPDVVTYSALITGLVHE-NMA 513

Query: 562 HSIDLLNSMMD 572
               LL + +D
Sbjct: 514 EEAYLLFTKLD 524



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/451 (31%), Positives = 226/451 (50%), Gaps = 25/451 (5%)

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           ++C+PD +T+  L+ GLC+ N+L++A  LL  M+  GC P    +N LI+G  K  + G+
Sbjct: 4   KSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQ 63

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A K +  M    CLP  VTY  ++ GLC  G    AV LLD M    C PN  TY  I+ 
Sbjct: 64  AFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVE 123

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           GL +  +  +  ++L  M  R +  +   Y++ I GL K  + ++A K   +M      P
Sbjct: 124 GLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTP 180

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + V Y+ +I+GLC+ G  D A  +L +M N GC  +  TYSSL+ GF + G+  +A+ + 
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
             M K  C  N V Y+ L+  L   G + +A  +  +M  RG  PDVV+Y++ I GLC A
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
             V++A  +F+ M  +E    P+  +Y++L+  LCK+  +  +I L+    ++    D++
Sbjct: 301 ERVKKAKAVFDRM--VERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDIL 358

Query: 581 -----------------TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
                             C +F   L EK+  P     F N +     KR++     +I 
Sbjct: 359 LYTVLLDGLCKGGRFDEACALFSKVLDEKICEPD--VFFYNVMLDSHCKRRQIDKALQIH 416

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           + ML++       TW  +V  LC   R+  A
Sbjct: 417 KQMLERNCC-NVVTWNILVHGLCVDDRLSDA 446



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 225/451 (49%), Gaps = 14/451 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++ ++I     SGD  S   +L +M          ++  +   + K   VE A+ L  +M
Sbjct: 184 SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM 243

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +  C+  + ++NS+L  + + G   +A    + +V  +     P+ +++N  I  +C+
Sbjct: 244 L-KLGCRPNMVAYNSLLGALHRLGHIGKA---EDMLVEMERRGFTPDVVSYNACIDGLCK 299

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V  A  +F  M  R C P+  +Y  L++ LCK+  LD+A+ L+++ +        + 
Sbjct: 300 AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILL 359

Query: 265 FNVLINGLCKNGELGRAAKLVDNMF-LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           + VL++GLCK G    A  L   +   K C P+   YN ++   C +  +DKA+ +  +M
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +   C  N VT+  +++GL    R  D   +L++M +  F  +   Y TL+  + K GK+
Sbjct: 420 LERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKS 478

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A++L+++ ++ GC P+ V YSALI GL      +EA  +LF  ++         ++++
Sbjct: 479 AAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAY-LLFTKLD------VALWNAM 531

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG-LCEDGKLREARMVWTQMLSRG 502
           + G+ E+G G   ++++ ++ +++   N   +   I G L +   L +AR ++ + +  G
Sbjct: 532 ILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGG 591

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             PD+   +++I      G +EEA ++F  M
Sbjct: 592 FFPDLFVANTLIDVFAKCGDLEEARRIFYSM 622



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 166/344 (48%), Gaps = 46/344 (13%)

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M ++    + + ++ L+ GL +  + E A +L  +M E GC P+  +Y+ALI G  +   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             +A + L EM+ N C     TY++++ G  ++G+   AV++  +M    C  N   Y+V
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM---- 533
           ++ GLCE+ KL EA+ +  +M  RG  PDVV Y+S I GLC    V+EA K    M    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 534 -----------LC----LEPKSQ-----------PDVFTYNILLNALCKQSNISHSIDLL 567
                      LC    L+  S+           PDV TY+ L++  CK   +  ++ LL
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF---------------K 612
           +SM+  GC P++V  N  L AL  +L       D L E+  R F               K
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGAL-HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 299

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +R      + + M+++  +P  S++  +V+ELC+ K +  AI 
Sbjct: 300 AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAIT 343



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 127/320 (39%), Gaps = 46/320 (14%)

Query: 73  TPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH 132
           TP   SY +       L++      +      ++ + R + ++V    +  +     K  
Sbjct: 319 TPNASSYSM-------LVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGG 371

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI---- 188
             +EA  LF  ++DE  C+  V  +N +L+   +     +AL+ +  ++     N+    
Sbjct: 372 RFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWN 431

Query: 189 ---------------------------LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR 221
                                      +P+ +T+  ++  +C+ G    A++LF E    
Sbjct: 432 ILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKG 491

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
            C PD+ TY  L+ GL  EN  +EA LL  ++ V         +N +I G  +NG     
Sbjct: 492 GCVPDVVTYSALITGLVHENMAEEAYLLFTKLDV-------ALWNAMILGYAENGSGDLG 544

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKG-NLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
            KL   +      PN  T+   I G  +K  +L KA  L DR V     P+     T+I+
Sbjct: 545 LKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLID 604

Query: 341 GLVKLGRAVDGARVLMSMEE 360
              K G   +  R+  SM++
Sbjct: 605 VFAKCGDLEEARRIFYSMKQ 624


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/451 (30%), Positives = 233/451 (51%), Gaps = 5/451 (1%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            F     + H      S+N +L V+ + G        YN ++ A     +PNT T+  ++
Sbjct: 3   FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAA---GCVPNTYTYGYLL 59

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           +++C+    + A  +FR M  + C P++++Y  L+ GLC+  ++DEA  LL+EM   G  
Sbjct: 60  RSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ 119

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+  L++GLCK G+L  A  L   M  +GC P+ V YN LI G   KG++ +A  L
Sbjct: 120 PNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            + M+   C+P   TY ++++G  + G       +   M  +    N + ++ L+ G  K
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G   +A +L+ +M   GC P+ V Y+ LI G+C  GKP EA+ +L EMI +G   +  +
Sbjct: 240 MGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ L+ G+ +SG    A++++ ++ K+    +   YS +I  LC  GK+  A +V+  M+
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           + G  PD      ++ GLC    + E+ +LF  M+  E    P +  YN+L+  LCK   
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE--CVPLIPEYNLLMYKLCKAKR 417

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
                ++ + + +RG  PD+    + L  L+
Sbjct: 418 SDDVCEIFHELTERGFSPDVEISKVILETLR 448



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/438 (30%), Positives = 228/438 (52%), Gaps = 5/438 (1%)

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
           + F+    +  H N    TL++N +++ + + G  D+    + +M    C P+ YTY  L
Sbjct: 1   MAFFQWAGSQVHYN--HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYL 58

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +  LC+  R +EA  +   M   GC P   ++++LI GLC+  ++  AA+L++ M   G 
Sbjct: 59  LRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH 118

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            PN VTY +L+ GLC  G L +AV L  RMV   C P+ V Y  +I+G  K G   +  R
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   M E+      + Y++L+SG  ++G+      L+K M+ +GC PN   ++ L+DG C
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           ++G   EA  +  EM + GC  +  +Y++L++G    GK H+A  + ++M ++    + V
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y++LI G  + G L  A  ++ ++   G +PD  +YS++I  LC AG V  A  +F +M
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             +   S PD      L+  LC+   ++ S +L  +M+   C P +   N+ +  L  K 
Sbjct: 359 --IANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLC-KA 415

Query: 594 EAPQDGTDFLNELAIRLF 611
           +   D  +  +EL  R F
Sbjct: 416 KRSDDVCEIFHELTERGF 433



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 39/225 (17%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  ++  G+F  ++ +   M R+  V    +F  +   + K   + EA RLF  M
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                C   V S+N+++  +  +G  H A      ++ +    + P+ +++N++I    +
Sbjct: 254 -RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS---GVGPDIVSYNILIDGYSK 309

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMD----------------------------- 235
            G +D+AI+LF E+P    EPD ++Y T++D                             
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 236 ------GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
                 GLC+  RL E+  L   M    C P    +N+L+  LCK
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCK 414


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/614 (26%), Positives = 289/614 (47%), Gaps = 47/614 (7%)

Query: 58  NAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREK---R 114
           N +  Q F D I ++ P   +++    +F ++I     S      + V+ RM R+    R
Sbjct: 110 NLQLGQRFIDSITSNCP---NFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSR 166

Query: 115 VVLEKSFIFIF--------------KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSV 160
           V + +S +  +              + Y +A  + E    F  +  +  C  ++ + NS+
Sbjct: 167 VEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCV-SINACNSL 225

Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           L  +++ G    A E Y  +V +    +  N  T N++I  +C+   ++N      +M  
Sbjct: 226 LGGLVKVGWVDLAWEIYQEVVRS---GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 282

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +   PD+ TY TL++  C++  L+EA  L+D M   G  P   T+N +INGLCK G+  R
Sbjct: 283 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 342

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A  ++D M   G  P+  TYN L+   C   N+  A  + D M +   +P+ V++  +I 
Sbjct: 343 AKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIG 402

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
            L K G      +    M+      +  IY+ LI G  + G   +A+K+  +M+E+GC  
Sbjct: 403 LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVL 462

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + V Y+ +++GLC+     EA+E+  EM   G   + +T+++L+ G+ + G  +KAV ++
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           + M + N   + V Y+ LI G C+  ++ +   +W  M+SR   P+ ++Y  +I+G CN 
Sbjct: 523 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 582

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           G V EA +L++EM  +E   +  + T N ++   C+  N   + + L++M+ +G  PD +
Sbjct: 583 GCVSEAFRLWDEM--VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGI 640

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
           T N  +                         K +     F +V  M    L P   T+  
Sbjct: 641 TYNTLING---------------------FIKEENMDRAFALVNKMENSGLLPDVITYNV 679

Query: 641 VVQELCRPKRIQAA 654
           ++    R  R+Q A
Sbjct: 680 ILNGFSRQGRMQEA 693



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 234/455 (51%), Gaps = 6/455 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  AY +  L+EEA  L  +M  +   K  V ++N+++N + + G Y RA    + ++  
Sbjct: 295 LINAYCRQGLLEEAFELMDSMSGK-GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML-- 351

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
             + + P+T T+N+++   CR   + +A ++F EMP +   PD+ ++  L+  L K   L
Sbjct: 352 -KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 410

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A+    +M+  G  P  V + +LI G C+NG +  A K+ D M  +GC+ + VTYNT+
Sbjct: 411 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 470

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++GLC +  L +A  L   M      P+  T+ T+ING  K G       +   M +R  
Sbjct: 471 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 530

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TLI G  K  + E   +LW  M+ +   PN + Y  LI+G C +G   EA  
Sbjct: 531 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 590

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EM+  G  A   T ++++KG+  +G   KA E   +M     V + + Y+ LI+G  
Sbjct: 591 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 650

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           ++  +  A  +  +M + G  PDV+ Y+ +++G    G ++EA  +  +M  +E    PD
Sbjct: 651 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM--IERGVNPD 708

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             TY  L+N    Q+N+  +  + + M+ RG  PD
Sbjct: 709 RSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 115/248 (46%), Gaps = 39/248 (15%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y K   + +A+ LF  M+   + K  V ++N++++   +     +  E +N 
Sbjct: 501 TFTTLINGYSKDGNMNKAVTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE--------------- 224
           +++ +   I PN +++ ++I   C +G V  A +L+ EM  +  E               
Sbjct: 560 MISRR---IYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 616

Query: 225 --------------------PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
                               PD  TY TL++G  KE  +D A  L+++M+  G  P  +T
Sbjct: 617 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 676

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NV++NG  + G +  A  ++  M  +G  P+  TY +LI+G   + NL +A  + D M+
Sbjct: 677 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 736

Query: 325 ASKCMPNE 332
               +P++
Sbjct: 737 QRGFVPDD 744


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 243/465 (52%), Gaps = 11/465 (2%)

Query: 126 KAYGKAHLVEEAIRLFH-TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
           KA     ++E+   L H + + E       +  N ++++ + +     A++ +  ++ ++
Sbjct: 11  KASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVND-----AIDLFESMIQSR 65

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
               LP  + FN +   V R    D  +   + M +   E D+YT   +++  C++ +L 
Sbjct: 66  P---LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 122

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            A  +L      G  P  +TF+ L+NG C  G +  A  LVD M      P+ VT +TLI
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +GLCLKG + +A+ L+DRMV     P+EVTYG ++N L K G +     +   MEER   
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   YS +I  L K+G  +DA+ L+ +M  KG K + V YS+LI GLC  GK D+  ++
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L EMI      +  T+S+L+  F + GK  +A E++ +M       + + Y+ LI G C+
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +  L EA  ++  M+S+GC+PD+V YS +I+  C A  V++ ++LF E+        P+ 
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI--SSKGLIPNT 420

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            TYN L+   C+   ++ + +L   M+ RG  P +VT  I L  L
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465



 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 160/536 (29%), Positives = 267/536 (49%), Gaps = 48/536 (8%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRM---RREKRVV 116
           K +  F+  +     KLG Y+    TF +L+  +   G       ++ RM   ++   +V
Sbjct: 118 KKKLLFAFSVLGRAWKLG-YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
              + I      G+   V EA+ L   MV E+  +    ++  VLN + + G    AL+ 
Sbjct: 177 TVSTLINGLCLKGR---VSEALVLIDRMV-EYGFQPDEVTYGPVLNRLCKSGNSALALDL 232

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           +  +   +  NI  + + +++VI ++C+ G  D+A+ LF EM ++  + D+ TY +L+ G
Sbjct: 233 FRKM---EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC + + D+   +L EM      P  VTF+ LI+   K G+L  A +L + M  +G  P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            +TYN+LI G C +  L +A  + D MV+  C P+ VTY  +IN   K  R         
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV-------- 401

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
                                      +D M+L++++  KG  PNT+ Y+ L+ G C+ G
Sbjct: 402 ---------------------------DDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K + A+E+  EM++ G   +  TY  L+ G  ++G+ +KA+EI++ M K+        Y+
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           ++IHG+C   K+ +A  ++  +  +G KPDVV Y+ MI GLC  GS+ EA  LF +M   
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK-- 552

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           E    PD FTYNIL+ A    S +  S++L+  M   G   D  T  + +  L ++
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 10/204 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           + +  F   GK +  +E   LF  MV       +V ++  +L+ +   G  ++ALE +  
Sbjct: 425 TLVLGFCQSGKLNAAKE---LFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEK 480

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  ++   +      +N++I  +C    VD+A  LF  +  +  +PD+ TY  ++ GLCK
Sbjct: 481 MQKSR---MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +  L EA +L  +M+ DGC P   T+N+LI        L  + +L++ M + G   +  T
Sbjct: 538 KGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRM 323
              +I  L  +  LDK  S LD +
Sbjct: 598 IKMVIDMLSDR-RLDK--SFLDML 618


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 153/476 (32%), Positives = 247/476 (51%), Gaps = 44/476 (9%)

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
           FH    V +FN +L    Q G  H+A++ +  +   K   ++P+ +++N VI  +C+   
Sbjct: 125 FHL--NVYNFNLLLKGFCQSGDSHKAMDLFCMM---KRNCLIPDCVSYNTVINGLCKGKR 179

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +  A +LF+EM    C+P+  T+  L+DG CK   ++E   LL+EM+  G       ++ 
Sbjct: 180 LVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSA 239

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI+G C  G++ R  +L + M  K   PN VTY+ L++ LC K    +A  +LD M   K
Sbjct: 240 LISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCK 299

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+ V Y  + +GL K GRA D  +VL  M +R    N   Y+ +I+GL KEG+ +DA+
Sbjct: 300 VRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDAL 359

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL---------------------- 425
            + + M +KG KP+ V YS L+ GLC VGK DEA ++L                      
Sbjct: 360 GILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQ 419

Query: 426 ---------------FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
                          + M+  G  +N  TY+ L+ G+  +GK  KA+E+WKD   +    
Sbjct: 420 ELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISP 479

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N   Y+VLI+GLC+   L  A+ ++ +  + G +P V  Y++++  LC   SVE+A  LF
Sbjct: 480 NAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLF 539

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            EM        PDV ++NI+++   K  ++  + +LL  M++    PD +T +I +
Sbjct: 540 QEMR--NANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILI 593



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 250/510 (49%), Gaps = 39/510 (7%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           +L  ++H +   + N +P+  + N +I  + +    D+ I +  +M   +  P   +   
Sbjct: 41  SLSHFHHTLQ-DYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSA 99

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++      +   A  +L  +   G       FN+L+ G C++G+  +A  L   M    
Sbjct: 100 LIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNC 159

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +P+ V+YNT+I+GLC    L +A  L   M   +C PN VT+  +I+G  K G   +G 
Sbjct: 160 LIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGF 219

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  ME+     + ++YS LISG   +G  E   +L+ +M+ K   PN V YS L++ L
Sbjct: 220 GLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNAL 279

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+  K  EA ++L  M       +   Y+ L  G  ++G+   A+++   M K     N 
Sbjct: 280 CKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNN 339

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ +I+GLC++G++ +A  +   M  +G KPDVV YS+++ GLC  G ++EA+ L N 
Sbjct: 340 VTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNL 399

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI----FLTA 588
           ++  E   +PDVF +N+++  LCKQ  + H+  +  +M++RG   ++VT NI    +L+A
Sbjct: 400 LMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSA 459

Query: 589 --LKEKLEAPQDGTD------------FLNEL--------AIRLFKRQRTSGGFKIVEVM 626
             L + LE  +D  D             +N L        A  LF ++R SG        
Sbjct: 460 GKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASG-------- 511

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                 P  S +  ++  LCR   ++ A N
Sbjct: 512 ----TRPTVSEYNTLMASLCRESSVEQARN 537



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 203/451 (45%), Gaps = 41/451 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   + K   VEE   L   M ++   +  V  ++++++    +G   R  E +N 
Sbjct: 201 TFSALIDGFCKNGDVEEGFGLLEEM-EKMGLEGDVFVYSALISGFCSKGDIERGKELFNE 259

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++     N+ PN +T++ ++  +C+      A Q+   M      PD+  Y  L DGL K
Sbjct: 260 MLRK---NVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSK 316

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R  +A+ +LD M   G  P  VT+N +INGLCK G +  A  +++ M  KG  P+ VT
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376

Query: 300 YNTLIHGLCLKGNLDKAVSLLD-------------------------------------R 322
           Y+TL+ GLC  G +D+AV LL+                                      
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MV      N VTY  +I+G +  G+      +     +     N   Y+ LI+GL K   
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A  L+ +    G +P    Y+ L+  LCR    ++A  +  EM N     +  +++ 
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G  ++G    A E+  +M   N V + + +S+LI+   + G+L EA  ++ +M+S G
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             PD V + S++ G    G  E+ + +  +M
Sbjct: 617 HVPDAVLFDSLLKGYSLKGKTEKVVSMLQQM 647



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 202/447 (45%), Gaps = 48/447 (10%)

Query: 82  GDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           GD   YS LI  + + GD +  + +   M R+       ++  +  A  K    +EA ++
Sbjct: 232 GDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQM 291

Query: 141 FHTMVDEFHCK--RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
             TM     CK    V ++  + + + + G    A++  + +V        PN +T+N +
Sbjct: 292 LDTMTG---CKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEE---PNNVTYNAI 345

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ---- 254
           I  +C+ G VD+A+ +   M  +  +PD+ TY TL+ GLC   ++DEAV LL+ +     
Sbjct: 346 INGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEF 405

Query: 255 --------------------------------VDGCFPTP-VTFNVLINGLCKNGELGRA 281
                                           V+  FP+  VT+N+LI+G    G+L +A
Sbjct: 406 HIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKA 465

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            +L  +    G  PN  TY  LI+GLC    L  A  L ++  AS   P    Y T++  
Sbjct: 466 LELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMAS 525

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYI-YSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           L +   +V+ AR L        H  + + ++ +I G  K G  E A +L  +M+     P
Sbjct: 526 LCR-ESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVP 584

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + + +S LI+   ++G+ DEA  +   M++ G   +A  + SL+KG+   GK  K V + 
Sbjct: 585 DNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSML 644

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           + MA  + V +    S ++  LC   K
Sbjct: 645 QQMADKDVVLDSKLTSTILACLCNMSK 671



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/293 (26%), Positives = 143/293 (48%), Gaps = 4/293 (1%)

Query: 134 VEEAIRLFHT-MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           ++EA+ L +  M  EFH K  V +FN V+  + ++     A   Y  +V         N 
Sbjct: 390 IDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMV---ERGFPSNI 446

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T+N++I      G +  A++L+++       P+  TY  L++GLCK   L  A  L ++
Sbjct: 447 VTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNK 506

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
            +  G  PT   +N L+  LC+   + +A  L   M      P+ V++N +I G    G+
Sbjct: 507 KRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGD 566

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           ++ A  LL  M+    +P+ +T+  +IN  +KLG+  + A +   M       +  ++ +
Sbjct: 567 VESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDS 626

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           L+ G   +GK E  + + +QM +K    ++ + S ++  LC + K  + E+IL
Sbjct: 627 LLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKIL 679


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 155/468 (33%), Positives = 252/468 (53%), Gaps = 12/468 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++AI LF  MV        V+ F+ +L+ I +   +   +     + N   + I  N  
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQN---LGISHNLY 111

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+++ I   CR   +  A+ +  +M      P I T  +L++G C  NR+ EAV L+D+M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  VTF  L++GL ++ +   A  LV+ M +KGC P+ VTY  +I+GLC +G  
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A++LL++M   K   + V Y TII+GL K     D   +   ME +    + + Y+ L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG- 432
           IS L   G+  DA +L   M+EK   P+ V ++ALID   + GK  EAE++  EM+ +  
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C  +   Y++L+KGF +  +  + +E++++M++   V N V Y+ LIHG  +      A+
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
           MV+ QM+S G  PD++ Y+ ++ GLCN G+VE AL +F  M   + K   D+ TY  ++ 
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK--LDIVTYTTMIE 469

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT-----ALKEKLEA 595
           ALCK   +    DL  S+  +G  P++VT    ++      LKE+ +A
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 222/440 (50%), Gaps = 6/440 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++ + NS+LN          A+   + +V    M   P+T+TF  ++  + +      A+
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMV---EMGYQPDTVTFTTLVHGLFQHNKASEAV 200

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L   M V+ C+PD+ TY  +++GLCK    D A+ LL++M+        V +N +I+GL
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK   +  A  L + M  KG  P+  TYN LI  LC  G    A  LL  M+     P+ 
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI-YSTLISGLFKEGKAEDAMKLWK 391
           V +  +I+  VK G+ V+  ++   M + K    + + Y+TLI G  K  + E+ M++++
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M ++G   NTV Y+ LI G  +    D A+ +  +M+++G   +  TY+ L+ G   +G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
               A+ +++ M K +   + V Y+ +I  LC+ GK+ +   ++  +  +G KP+VV Y+
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +M+ G C  G  EEA  LF EM   E    P+  TYN L+ A  +  + + S +L+  M 
Sbjct: 501 TMMSGFCRKGLKEEADALFVEM--KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558

Query: 572 DRGCDPDLVTCNIFLTALKE 591
             G   D  T  +    L +
Sbjct: 559 SCGFAGDASTFGLVTNMLHD 578



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 188/398 (47%), Gaps = 38/398 (9%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------------YNHI 180
           EA+ L   MV +  C+  + ++ +V+N + + G    AL                 YN I
Sbjct: 198 EAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256

Query: 181 VNA----KHMN-------------ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           ++     KHM+             I P+  T+N +I  +C  G   +A +L  +M  +N 
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAA 282
            PD+  +  L+D   KE +L EA  L DEM +   CFP  V +N LI G CK   +    
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           ++   M  +G + N VTY TLIHG     + D A  +  +MV+    P+ +TY  +++GL
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
              G       V   M++R   ++   Y+T+I  L K GK ED   L+  +  KG KPN 
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V Y+ ++ G CR G  +EA+ +  EM  +G   N+ TY++L++     G    + E+ K+
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKE 556

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           M       +   +  L+  +  DG+L ++   +  MLS
Sbjct: 557 MRSCGFAGDASTFG-LVTNMLHDGRLDKS---FLDMLS 590



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 204/453 (45%), Gaps = 79/453 (17%)

Query: 238 CKEN---------RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           C+EN         +LD+A+ L  +M     FP+ V F+ L++ + K  +      L + M
Sbjct: 42  CRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 101

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              G   N  TY+  I+  C +  L  A+++L +M+     P+ VT  +++NG     R 
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +   ++  M E  +  +   ++TL+ GLF+  KA +A+ L ++M+ KGC+P+ V Y A+
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221

Query: 409 IDGLCRVGKPD--------------EAEEILFEMI---------------------NNGC 433
           I+GLC+ G+PD              EA+ +++  I                       G 
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             + FTY+ L+      G+   A  +  DM + N   + V ++ LI    ++GKL EA  
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341

Query: 494 VWTQML-SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------- 533
           ++ +M+ S+ C PDVVAY+++I G C    VEE +++F EM                   
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401

Query: 534 --------------LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
                           +     PD+ TYNILL+ LC   N+  ++ +   M  R    D+
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
           VT    + AL  K    +DG D    L+++  K
Sbjct: 462 VTYTTMIEALC-KAGKVEDGWDLFCSLSLKGVK 493



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 23/201 (11%)

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ ++ DM K+    + V +S L+  + +  K      +  QM + G   ++  YS  I+
Sbjct: 59  AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
             C    +  AL +  +M+ L     P + T N LLN  C  + IS ++ L++ M++ G 
Sbjct: 119 YFCRRSQLSLALAILGKMMKL--GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            PD VT                        L   LF+  + S    +VE M+ K   P  
Sbjct: 177 QPDTVT---------------------FTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215

Query: 636 STWERVVQELCRPKRIQAAIN 656
            T+  V+  LC+      A+N
Sbjct: 216 VTYGAVINGLCKRGEPDLALN 236


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 254/490 (51%), Gaps = 6/490 (1%)

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCKRTVKSFNS 159
           ++++VL RM +   +    S+  + K     +  +EA+ L   M D+   C   V S+ +
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           V+N   +EG   +A   Y+ +++     ILPN +T++ +I  +C+   +D A+++   M 
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLD---RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                P+  TY +++ G C   +  EA+  L +M  DG  P  VT+N L++ LCKNG   
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A K+ D+M  +G  P   TY TL+ G   KG L +   LLD MV +   PN   +  +I
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
               K G+      V   M ++  + +   Y T+I  L K G+ EDAM+ ++QM+++   
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P  +VY++LI  LC   K D+A+E++ EM++ G   +   ++S++    + G+  ++ ++
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           +  M +     + + YS LI G C  GK+ EA  +   M+S G KPD V Y+++I+G C 
Sbjct: 502 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
              +E+AL LF EM        PD+ TYNI+L  L +    + + +L   + + G   +L
Sbjct: 562 ISRMEDALVLFREM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 580 VTCNIFLTAL 589
            T NI L  L
Sbjct: 620 STYNIILHGL 629



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 233/486 (47%), Gaps = 28/486 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  YN +  A    + PN  T+ ++I + C  G +D        +  +    D   +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 233 LMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           L+ GLC + R  +A+ ++L  M   GC P   ++N+L+ GLC       A +L+  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 292 G--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
           G  C P+ V+Y T+I+G   +G+LDKA      M+    +PN VTY +II  L K  +A+
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK-AQAM 250

Query: 350 DGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
           D A  VL SM +     N   Y++++ G    G+ ++A+   K+M   G +P+ V Y++L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           +D LC+ G+  EA ++   M   G      TY +L++G+   G   +   +   M +N  
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N   +S+LI    + GK+ +A +V+++M  +G  PD V Y ++I  LC +G VE+A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            F +M  ++ +  P    YN L+++LC       + +L+  M+DRG   D +        
Sbjct: 431 YFEQM--IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-------- 480

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                        F N +     K  R     K+ ++M++  + P   T+  ++   C  
Sbjct: 481 -------------FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527

Query: 649 KRIQAA 654
            ++  A
Sbjct: 528 GKMDEA 533



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 173/360 (48%), Gaps = 22/360 (6%)

Query: 316 AVSLLDRMV---ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           AVS  +RM    A +  PN  TYG +I      GR   G   L ++ ++ F V+   ++ 
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 373 LISGLFKEGKAEDAMKL-WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           L+ GL  + +  DAM +  ++M + GC PN   Y+ L+ GLC   +  EA E+L  M ++
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 432 G--CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           G  C  +  +Y++++ GFF+ G   KA   + +M     + N V YS +I  LC+   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  V T M+  G  P+   Y+S++HG C++G  +EA+    +M       +PDV TYN 
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH--SDGVEPDVVTYNS 309

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQDGTDFLNELA 607
           L++ LCK    + +  + +SM  RG  P++ T    L   A K  L       D +    
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 608 IR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           I               K+ +      +   M Q+ L+P T T+  V+  LC+  R++ A+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 214/441 (48%), Gaps = 12/441 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ S++  Y +SG  K     L +M     E  VV   S +      G+     EA ++F
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC---TEARKMF 327

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIK 200
            +M      KR +K   +    ++Q      AL   + +++    N I PN   F+++I 
Sbjct: 328 DSMT-----KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              + G VD A+ +F +M  +   PD  TY T++  LCK  R+++A+   ++M  +   P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             + +N LI+ LC   +  +A +L+  M  +G   + + +N++I   C +G + ++  L 
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D MV     P+ +TY T+I+G    G+  +  ++L SM       +   Y+TLI+G  K 
Sbjct: 503 DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI 562

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            + EDA+ L+++M   G  P+ + Y+ ++ GL +  +   A+E+   +  +G      TY
Sbjct: 563 SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTY 622

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  ++    +A+ +++++   +       ++++I  L + G+  EA+ ++  + +
Sbjct: 623 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682

Query: 501 RGCKPDVVAYSSMIHGLCNAG 521
            G  PDV  YS M   L   G
Sbjct: 683 NGLVPDVRTYSLMAENLIEQG 703


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 152/501 (30%), Positives = 253/501 (50%), Gaps = 24/501 (4%)

Query: 136 EAIRLFHTMV------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           E++ L  TMV      D   C + +K F ++ N I +       LE +            
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN-IPKAVRVMEILEKFGQ---------- 155

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+   +N +I   C++  +D+A ++   M  ++  PD  TY  ++  LC   +LD A+ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+++  D C PT +T+ +LI      G +  A KL+D M  +G  P+  TYNT+I G+C 
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G +D+A  ++  +      P+ ++Y  ++  L+  G+  +G +++  M   K   N   
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS LI+ L ++GK E+AM L K M EKG  P+   Y  LI   CR G+ D A E L  MI
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG-KL 488
           ++GC  +   Y++++    ++GK  +A+EI+  + +  C  N   Y+ +   L   G K+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           R   M+  +M+S G  PD + Y+SMI  LC  G V+EA +L  +M   E    P V TYN
Sbjct: 456 RALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE--FHPSVVTYN 512

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KEKLEAPQDGTDFLNE 605
           I+L   CK   I  +I++L SM+  GC P+  T  + +  +     + EA +   D +  
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572

Query: 606 LAIRLFKRQRTSGGFKIVEVM 626
            AI  +  +R    F ++ V+
Sbjct: 573 DAISEYSFKRLHRTFPLLNVL 593



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 193/396 (48%), Gaps = 17/396 (4%)

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C++G    +  L++ M  KG  P+ +    LI G     N+ KAV +++ ++     P+ 
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y  +ING  K+ R  D  RVL  M  + F  +   Y+ +I  L   GK + A+K+  Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           ++   C+P  + Y+ LI+     G  DEA +++ EM++ G   + FTY+++++G  + G 
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A E+ +++       + + Y++L+  L   GK  E   + T+M S  C P+VV YS 
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I  LC  G +EEA+ L    L  E    PD ++Y+ L+ A C++  +  +I+ L +M+ 
Sbjct: 339 LITTLCRDGKIEEAMNLLK--LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDF--LNELAIR--------LFKRQRTSG---- 618
            GC PD+V  N  L  L +  +A Q    F  L E+           +F    +SG    
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              ++  M+   + P   T+  ++  LCR   +  A
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 179/336 (53%), Gaps = 4/336 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA++L   M+     K  + ++N+++  + +EG+  RA E    + N +     P+ +
Sbjct: 244 VDEALKLMDEMLSR-GLKPDMFTYNTIIRGMCKEGMVDRAFEM---VRNLELKGSEPDVI 299

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N++++ +   G  +   +L  +M    C+P++ TY  L+  LC++ +++EA+ LL  M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G  P   +++ LI   C+ G L  A + ++ M   GCLP+ V YNT++  LC  G  
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A+ +  ++    C PN  +Y T+ + L   G  +    +++ M       +E  Y+++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           IS L +EG  ++A +L   M      P+ V Y+ ++ G C+  + ++A  +L  M+ NGC
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
             N  TY+ L++G   +G   +A+E+  D+ + + +
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 146/291 (50%), Gaps = 17/291 (5%)

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           + G   +++ L + M+ KG  P+ ++ + LI G   +    +A  ++ E++      + F
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVF 159

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            Y++L+ GF +  +   A  +   M   +   + V Y+++I  LC  GKL  A  V  Q+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           LS  C+P V+ Y+ +I      G V+EALKL +EML    K  PD+FTYN ++  +CK+ 
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK--PDMFTYNTIIRGMCKEG 277

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK---LEAPQDGTDFLNE---------- 605
            +  + +++ ++  +G +PD+++ NI L AL  +    E  +  T   +E          
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 606 -LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            L   L +  +      ++++M +K L+P   +++ ++   CR  R+  AI
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 89/194 (45%), Gaps = 23/194 (11%)

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           + H  C  G   E+  +   M+ +G  PDV+  + +I G     ++ +A+++   M  LE
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRV---MEILE 151

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEA 595
              QPDVF YN L+N  CK + I  +  +L+ M  +   PD VT NI + +L  + KL+ 
Sbjct: 152 KFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDL 211

Query: 596 PQDGTDFLNELA-----------IRLFKRQRTSGG----FKIVEVMLQKFLSPQTSTWER 640
                  LN+L              L +     GG     K+++ ML + L P   T+  
Sbjct: 212 ---ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNT 268

Query: 641 VVQELCRPKRIQAA 654
           +++ +C+   +  A
Sbjct: 269 IIRGMCKEGMVDRA 282


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 156/502 (31%), Positives = 252/502 (50%), Gaps = 37/502 (7%)

Query: 161 LNVIIQEGLYHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +N++I      R L F   +V  A      PNT+TF+ +I   C  G V  A+ L   M 
Sbjct: 107 MNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMV 166

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                P++ T  TL++GLC + R+ EA++L+D M   GC    +T+  ++N +CK+G   
Sbjct: 167 EMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTA 226

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  L   M  +    + V Y+ +I  LC  GNLD A+SL + M       + V Y +II
Sbjct: 227 LALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSII 286

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            GL   GR  DGA++L  M  R    N   +S LI    KEGK  +A +L+ +M+ +G  
Sbjct: 287 GGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIA 346

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+T+ YS+LIDG C+  +  EA ++L  M++ GC  N  TYS L+  + ++ +    + +
Sbjct: 347 PDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRL 406

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           + +++    V + V Y+ L+ G C+ GKL  A+ ++ +M+SRG  P VV Y  ++ GLC+
Sbjct: 407 FCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCD 466

Query: 520 AGSVEEALKLFNEM------------------LCLEPK---------------SQPDVFT 546
            G +++AL++F +M                  +C   K                +PDV T
Sbjct: 467 NGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLT 526

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN+++  LCK+ ++S +  L   M + GC P   T NI + A            + + E+
Sbjct: 527 YNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRA-HLGGSGVISSVELIEEM 585

Query: 607 AIRLFKRQRTSGGFKIVEVMLQ 628
            +R F    ++   K+V VML 
Sbjct: 586 KMRGFAADAST--IKMVVVMLS 605



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 141/432 (32%), Positives = 230/432 (53%), Gaps = 10/432 (2%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           N ++++ + E     A++ +  ++ ++    LP+ + F+ +   V R    D  +   +E
Sbjct: 43  NGIVDIKVNE-----AIDLFESMIQSRP---LPSLIDFSKLFSAVARRKEYDLVLGFCKE 94

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M +   E ++YT   +++  C++ +L  A  ++      G  P  +TF+ LING C  G 
Sbjct: 95  MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGR 154

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +  A  LVD M      PN VT NTLI+GLCLKG + +A+ L+DRMV   C  NE+TYG 
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           ++N + K G       +   MEER    +   YS +I  L K+G  +DA+ L+ +M  KG
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            K + V YS++I GLC  G+ D+  ++L EMI      N  T+S+L+  F + GK  +A 
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E++ +M       + + YS LI G C++ +L EA  +   M+S+GC+P++V YS +I+  
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSY 394

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C A  V+  ++LF E+         D  TYN L+   C+   ++ + +L   M+ RG  P
Sbjct: 395 CKAKRVDNGMRLFCEI--SSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPP 452

Query: 578 DLVTCNIFLTAL 589
            +VT  I L  L
Sbjct: 453 SVVTYGILLDGL 464



 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 144/458 (31%), Positives = 243/458 (53%), Gaps = 6/458 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ L   MV E   +  V + N+++N +  +G    AL   + +V         N +
Sbjct: 155 VSEAVALVDRMV-EMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV---KYGCEANEI 210

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  V+  +C+ G    A+ LFR+M  R+ +  +  Y  ++D LCK+  LD+A+ L +EM
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           ++ G     V ++ +I GLC +G     AK++  M  +  +PN VT++ LI     +G L
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L + MVA    P+ +TY ++I+G  K  R  +  ++L  M  +    N   YS L
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSIL 390

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+   K  + ++ M+L+ ++  KG   +TV Y+ L+ G C+ GK + A+E+  EM++ G 
Sbjct: 391 INSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGV 450

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY  L+ G  ++G+  KA+EI++ M K+  +     Y+++IHG+C   K+ +A  
Sbjct: 451 PPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWS 510

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  +  +G KPDV+ Y+ MI GLC  GS+ EA  LF +M   E    P   TYNIL+ A
Sbjct: 511 LFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKM--KEDGCAPSDCTYNILIRA 568

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
               S +  S++L+  M  RG   D  T  + +  L +
Sbjct: 569 HLGGSGVISSVELIEEMKMRGFAADASTIKMVVVMLSD 606



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 164/362 (45%), Gaps = 31/362 (8%)

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
           +V+Y   +    +   +++A+ L + M+ S+ +P+ + +  + + + +            
Sbjct: 34  KVSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCK 93

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M+      N Y  + +I+   ++ K   A  +  + ++ G +PNT+ +S LI+G C  G
Sbjct: 94  EMDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEG 153

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           +  EA  ++  M+      N  T ++L+ G    G+  +A+ +   M K  C  NE+ Y 
Sbjct: 154 RVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYG 213

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            +++ +C+ G    A  ++ +M  R  K  VV YS +I  LC  G++++AL LFNEM   
Sbjct: 214 PVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM--- 270

Query: 537 EPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK--- 592
           E K  + DV  Y+ ++  LC          +L  M+ R   P++VT +  +    ++   
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           LEA +      NE                    M+ + ++P T T+  ++   C+  R+ 
Sbjct: 331 LEAKE----LYNE--------------------MVARGIAPDTITYSSLIDGFCKENRLG 366

Query: 653 AA 654
            A
Sbjct: 367 EA 368


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 154/529 (29%), Positives = 273/529 (51%), Gaps = 28/529 (5%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++AI LF  M+        V  F+   + I +   ++  L+F   +   +   I  N  T
Sbjct: 70  DDAIALFQEMIRSRPLPGLV-DFSRFFSAIARTKQFNLVLDFCKQL---ELNGIAHNIYT 125

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N++I   CR      A  +  ++     EPD  T+ TL++GLC E ++ +AV+L+D M 
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +GC P  VT+N ++NG+C++G+   A  ++  M  +    +  TY+T+I  LC  G +D
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A+SL   M       + VTY +++ GL K G+  DGA +L  M  R+   N   ++ L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
               KEGK ++A +L+K+M+ +G  PN + Y+ L+DG C   +  EA  +L  M+ N C+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  T++SL+KG+    +    ++++++++K   V N V YS+L+ G C+ GK++ A  +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD--VFTYNILLN 552
           + +M+S G  PDV+ Y  ++ GLC+ G +E+AL++F ++     KS+ D  +  Y  ++ 
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL----QKSKMDLGIVMYTTIIE 481

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVT----------------CNIFLTALKEKLEAP 596
            +CK   +  + +L  S+  +G  P+++T                 NI L  ++E   AP
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            D T   N L     +    +   K++E M     S   S+ + V+  L
Sbjct: 542 NDCT--YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 162/342 (47%), Gaps = 23/342 (6%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A++L   M+ S+ +P  V +    + + +  +          +E      N Y  + +
Sbjct: 70  DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+   +  K   A  +  ++M+ G +P+T  ++ LI+GLC  GK  +A  ++  M+ NGC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGC 189

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY+S++ G   SG    A ++ + M + N   +   YS +I  LC DG +  A  
Sbjct: 190 QPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M ++G K  VV Y+S++ GLC AG   +   L  +M+  E    P+V T+N+LL+ 
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI--VPNVITFNVLLDV 307

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
             K+  +  + +L   M+ RG  P+++T N  +           DG    N         
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLM-----------DGYCMQN--------- 347

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            R S    ++++M++   SP   T+  +++  C  KR+   +
Sbjct: 348 -RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 134/290 (46%), Gaps = 18/290 (6%)

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K +DA+ L+++M+     P  V +S     + R  + +   +   ++  NG A N +T +
Sbjct: 68  KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            ++  F    K   A  +   + K     +   ++ LI+GLC +GK+ +A ++  +M+  
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC+PD+V Y+S+++G+C +G    A  +  +M   E   + DVFTY+ ++++LC+   I 
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKM--EERNVKADVFTYSTIIDSLCRDGCID 245

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------ 609
            +I L   M  +G    +VT N  +  L  K     DG   L ++  R            
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 610 ---LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                K  +     ++ + M+ + +SP   T+  ++   C   R+  A N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/471 (31%), Positives = 252/471 (53%), Gaps = 4/471 (0%)

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           +F+  ++GK   +++AI LF  MV       ++  FN +L+ I +   +   +     + 
Sbjct: 11  LFVGISWGKDLKLDDAIGLFGGMVKSRPLP-SIFEFNKLLSAIAKMKKFDLVISL-ALLG 68

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
               +   P+ +T + ++   C    + +A+ L  +M      PD  T+ TL+ GL   N
Sbjct: 69  KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 128

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +  EAV L+D M   GC P  VT+ V++NGLCK G++  A  L++ M       + V +N
Sbjct: 129 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 188

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           T+I  LC   ++D A++L   M      PN VTY ++I+ L   GR  D +++L  M E+
Sbjct: 189 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 248

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
           K + N   ++ LI    KEGK  +A KL   M+++   P+   Y++LI+G C   + D+A
Sbjct: 249 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA 308

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           +++   M++  C  +  TY++L+KGF +S +     E++++M+    V + V Y+ LI G
Sbjct: 309 KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 368

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           L  DG    A+ V+ QM+S G  PD++ YS ++ GLCN G +E+AL++F+ M   E K  
Sbjct: 369 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIK-- 426

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            D++ Y  ++  +CK   +    DL  S+  +G  P++VT N  ++ L  K
Sbjct: 427 LDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK 477



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 207/398 (52%), Gaps = 4/398 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ L   MV +  C+  + ++  V+N + + G    A    N +  AK   I  + + F
Sbjct: 132 EAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK---IEADVVIF 187

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N +I ++C+   VD+A+ LF+EM  +   P++ TY +L+  LC   R  +A  LL +M  
Sbjct: 188 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 247

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
               P  VTFN LI+   K G+   A KL D+M  +   P+  TYN+LI+G C+   LDK
Sbjct: 248 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 307

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  + + MV+  C P+  TY T+I G  K  R  DG  +   M  R    +   Y+TLI 
Sbjct: 308 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 367

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GLF +G  ++A K++KQM+  G  P+ + YS L+DGLC  GK ++A E+   M  +    
Sbjct: 368 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 427

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           + + Y+++++G  ++GK     +++  ++      N V Y+ +I GLC    L+EA  + 
Sbjct: 428 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 487

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +M   G  PD   Y+++I      G    + +L  EM
Sbjct: 488 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 525



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 232/452 (51%), Gaps = 8/452 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y     + +A+ L   MV+  +   T+ +F ++++ +    L+++A E    +   
Sbjct: 85  LLNGYCHGKRISDAVALVDQMVEMGYRPDTI-TFTTLIHGLF---LHNKASEAVALVDRM 140

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 PN +T+ +V+  +C+ G +D A  L  +M     E D+  + T++D LCK   +
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A+ L  EM+  G  P  VT++ LI+ LC  G    A++L+ +M  K   PN VT+N L
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I     +G   +A  L D M+     P+  TY ++ING     R     ++   M  +  
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TLI G  K  + ED  +L+++M  +G   +TV Y+ LI GL   G  D A++
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  +M+++G   +  TYS L+ G   +GK  KA+E++  M K+    +   Y+ +I G+C
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 440

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK+ +   ++  +  +G KP+VV Y++MI GLC+   ++EA  L  +M   E    PD
Sbjct: 441 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK--EDGPLPD 498

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
             TYN L+ A  +  + + S +L+  M  R C
Sbjct: 499 SGTYNTLIRAHLRDGDKAASAELIREM--RSC 528



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 166/344 (48%), Gaps = 29/344 (8%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR--AVDGARVLMSMEERKFHVNEYIY 370
           LD A+ L   MV S+ +P+   +  +++ + K+ +   V    +L  M +  +  +    
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S+L++G     +  DA+ L  QM+E G +P+T+ ++ LI GL    K  EA  ++  M+ 
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC  N  TY  ++ G  + G    A  +   M       + V ++ +I  LC+   + +
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++ +M ++G +P+VV YSS+I  LC+ G   +A +L ++M+  E K  P++ T+N L
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI--EKKINPNLVTFNAL 260

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAI 608
           ++A  K+     +  L + M+ R  DPD+ T N  +    + ++L+  +           
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK----------- 309

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                       ++ E M+ K   P   T+  +++  C+ KR++
Sbjct: 310 ------------QMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 341



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 147/302 (48%), Gaps = 9/302 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF +LI  +   G F   E +   M   KR +    F +  +   +     +++A ++F 
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMI--KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 313

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV +  C   + ++N+++    +        E +  +    H  ++ +T+T+  +I+ +
Sbjct: 314 FMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREM---SHRGLVGDTVTYTTLIQGL 369

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
              G  DNA ++F++M      PDI TY  L+DGLC   +L++A+ + D MQ        
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 429

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             +  +I G+CK G++     L  ++ LKG  PN VTYNT+I GLC K  L +A +LL +
Sbjct: 430 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 489

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M     +P+  TY T+I   ++ G     A ++  M   +F V +     L++ +  +G+
Sbjct: 490 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVANMLHDGR 548

Query: 383 AE 384
            +
Sbjct: 549 LD 550



 Score = 48.1 bits (113), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 18/150 (12%)

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS--NISHSIDLLNSMMDRGCDPDLV 580
           +++A+ LF  M+   P   P +F +N LL+A+ K    ++  S+ LL  MM  G +P +V
Sbjct: 23  LDDAIGLFGGMVKSRP--LPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIV 80

Query: 581 TCNIFLTAL--KEKLEAPQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVM 626
           T +  L      +++       D + E+  R            LF   + S    +V+ M
Sbjct: 81  TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 140

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +Q+   P   T+  VV  LC+   I  A N
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 170


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 135/451 (29%), Positives = 233/451 (51%), Gaps = 5/451 (1%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            F     + H      S+N +L V+ + G        YN ++ A     +PNT T+  ++
Sbjct: 3   FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGA---GCVPNTYTYGYLL 59

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           +++C+    + A  +FR M  + C P++++Y  L+ GLC+  ++DEA  LL+EM   G  
Sbjct: 60  RSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ 119

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+  L++GLCK G+L  A  L   M  +GC P+ V YN LI G   KG++ +A  L
Sbjct: 120 PNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRL 179

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            + M+   C+P   TY ++++G  + G       +   M  +    N + ++ L+ G  K
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G   +A +L+ +M   GC P+ V Y+ L+ G+C  GKP EA+ +L EMI +G   +  +
Sbjct: 240 MGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ L+ G+ +SG    A++++ ++ K+    +   YS +I  LC  GK+  A +V+  M+
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           + G  PD      ++ GLC    + E+ +LF  M+  E    P +  YN+L+  LCK   
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFE--CVPLIPEYNLLMYKLCKAKR 417

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
                ++ + + +RG  PD+    + L  L+
Sbjct: 418 SDDVCEIFHELTERGFSPDVEISKVILETLR 448



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 228/438 (52%), Gaps = 5/438 (1%)

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
           + F+    +  H N    TL++N +++ + + G  D+    + +M    C P+ YTY  L
Sbjct: 1   MAFFQWAGSQVHYN--HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYL 58

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +  LC+  R +EA  +   M   GC P   ++++LI GLC+  ++  AA+L++ M   G 
Sbjct: 59  LRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH 118

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            PN VTY +L+ GLC  G L +AV L  RMV   C P+ V Y  +I+G  K G   +  R
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   M E+      + Y++L+SG  ++G+      L+K M+ +GC PN   ++ L+DG C
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           ++G   EA  +  EM + GC  +  +Y++LM+G    GK H+A  + ++M ++    + V
Sbjct: 239 KMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIV 298

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y++LI G  + G L  A  ++ ++   G +PD  +YS++I  LC AG V  A  +F +M
Sbjct: 299 SYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDM 358

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             +   S PD      L+  LC+   ++ S +L  +M+   C P +   N+ +  L  K 
Sbjct: 359 --IANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLC-KA 415

Query: 594 EAPQDGTDFLNELAIRLF 611
           +   D  +  +EL  R F
Sbjct: 416 KRSDDVCEIFHELTERGF 433



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 213/429 (49%), Gaps = 4/429 (0%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           Y  G  ++  L++  A SG    +      M     V    ++ ++ ++  +A   EEA 
Sbjct: 13  YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
            +F  M  +  C   V S++ ++  + +      A E  N +++  H    PN +T+  +
Sbjct: 73  SVFRGMAAQ-GCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ---PNVVTYGSL 128

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           +  +C++G +  A+ LF  M  R C PD   Y  L+DG  K+  + EA  L +EM   GC
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            PT  T+N L++G  + GE GR   L  +M  +GC+PN  T+N L+ G C  G++ +A  
Sbjct: 189 IPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHR 248

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           L   M +  C P+ V+Y T++ G+   G+  +  R+L  M       +   Y+ LI G  
Sbjct: 249 LFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYS 308

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K G  + A+KL+ ++ + G +P+   YS +ID LCR GK   A  +  +MI NG A +A 
Sbjct: 309 KSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAA 368

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
               L+ G     +  ++ E+++ M K  CV     Y++L++ LC+  +  +   ++ ++
Sbjct: 369 VVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHEL 428

Query: 499 LSRGCKPDV 507
             RG  PDV
Sbjct: 429 TERGFSPDV 437



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/345 (24%), Positives = 140/345 (40%), Gaps = 39/345 (11%)

Query: 77  GSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEE 136
           G +Q    T+ SL+      G  K    +  RM           +  +   + K   + E
Sbjct: 116 GGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGE 175

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A RLF  M+++  C  TV ++NS+L+   ++G + R    +  ++       +PN  TFN
Sbjct: 176 AYRLFEEMLEK-GCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDML---RQGCVPNIFTFN 231

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPD------------------------------ 226
            ++   C++G +  A +LF EM    C PD                              
Sbjct: 232 NLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRS 291

Query: 227 -----IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
                I +Y  L+DG  K   LD A+ L  E+   G  P   +++ +I+ LC+ G++G A
Sbjct: 292 GVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAA 351

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
             +  +M   G  P+      L+ GLC    L ++  L   MV  +C+P    Y  ++  
Sbjct: 352 FVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYK 411

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
           L K  R+ D   +   + ER F  +  I   ++  L +    E A
Sbjct: 412 LCKAKRSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAA 456


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 159/490 (32%), Positives = 254/490 (51%), Gaps = 14/490 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF  +I      G+      +  RM+       VV   S I     YGK   +EE  +L 
Sbjct: 202 TFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLI---DGYGKCGDLEEVEQLV 258

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  +  C   V ++N+++N   + G   +A  ++  +   K   ++ N +TF+  +  
Sbjct: 259 SEM-RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEM---KRQGVVANVVTFSTFVDA 314

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+ GLV  A++LF +M VR   P+ +TY +L+DG CK  RLD+A++LLDEM   G  P 
Sbjct: 315 FCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+ V+++GLCK G++  A  ++  M   G   NE+ Y TLIHG  +  N ++A+ LL+
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLN 434

Query: 322 RMVASKCMPNEVT-YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           +M  +K M  +V+ YGT+I GL K  +  +   +L  M       N  IY+T++  LFK 
Sbjct: 435 QM-KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKA 493

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK  +A+ L  ++++ G +PN V Y ALIDGLC+ G   EA     +M   G   N   Y
Sbjct: 494 GKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAY 553

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++L+ GF + G  +KA+ +  +M       ++V Y+ LI G  +   L++A  + T+M+ 
Sbjct: 554 TALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIE 613

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G + D+  Y+  I G CN   ++EA  + +EM  +     PD   YN L+    K  N+
Sbjct: 614 SGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM--IGTGITPDKTVYNCLIRKYQKLGNM 671

Query: 561 SHSIDLLNSM 570
             +  L N M
Sbjct: 672 EEASSLQNEM 681



 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 146/436 (33%), Positives = 224/436 (51%), Gaps = 5/436 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FN V++ + +EG    A   +   V  K M   P+ +T+N +I    + G ++   Q
Sbjct: 200 VFTFNIVIDFLCKEGELVEARALF---VRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQ 256

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L  EM    C  D+ TY  L++   K  R+++A     EM+  G     VTF+  ++  C
Sbjct: 257 LVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFC 316

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G +  A KL   M ++G +PNE TY +L+ G C  G LD A+ LLD MV    +PN V
Sbjct: 317 KEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 376

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +++GL K G+  +   VL  ME      NE +Y+TLI G F    +E A+ L  QM
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             KG + +  +Y  LI GLC+  K DEA+ +L +M   G   N   Y+++M   F++GK 
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +AV +   +  +    N V Y  LI GLC+ G + EA   + +M   G  P+V AY+++
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I G C  GS+ +A+ L NEM  ++     D   Y  L++   KQ+N+  +  L   M++ 
Sbjct: 557 IDGFCKIGSLNKAMHLMNEM--IDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIES 614

Query: 574 GCDPDLVTCNIFLTAL 589
           G   DL     F++  
Sbjct: 615 GLQLDLYCYTCFISGF 630



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 149/498 (29%), Positives = 240/498 (48%), Gaps = 52/498 (10%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTV--KSFNSVLNVIIQEGLYHRALEFYNHIV 181
           +  A  + HL    + L H        +R+      +++L+++   GL   A+     + 
Sbjct: 102 LLGAGHRPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADHGLLDDAVR---ALA 158

Query: 182 NAKHMNILPNTLTFNLVIKTVCR---LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
             + + + PNT T N ++  + R    GLV    +LF  +PV    P+++T+  ++D LC
Sbjct: 159 RVRQLRVPPNTRTCNHILLRLARNRQGGLVR---RLFDLLPV----PNVFTFNIVIDFLC 211

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           KE  L EA  L   M+  GC P  VT+N LI+G  K G+L    +LV  M   GC  + V
Sbjct: 212 KEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVV 271

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TYN LI+     G ++KA S    M     + N VT+ T ++   K G   +  ++   M
Sbjct: 272 TYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQM 331

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             R    NE+ Y++L+ G  K G+ +DA+ L  +M+ +G  PN V Y+ ++DGLC+ GK 
Sbjct: 332 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 391

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA+ +L  M   G  AN   Y++L+ G F +    +A+++   M       +   Y  L
Sbjct: 392 AEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTL 451

Query: 479 IHGLCEDGKLREARMVWTQM-----------------------------------LSRGC 503
           I GLC+D K+ EA+ +  +M                                   L  G 
Sbjct: 452 IWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGF 511

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +P+VV Y ++I GLC AGS+ EA+  FN+M   E    P+V  Y  L++  CK  +++ +
Sbjct: 512 QPNVVTYCALIDGLCKAGSISEAISHFNKM--RELGLDPNVQAYTALIDGFCKIGSLNKA 569

Query: 564 IDLLNSMMDRGCDPDLVT 581
           + L+N M+D+G   D V 
Sbjct: 570 MHLMNEMIDKGMSLDKVV 587



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 201/438 (45%), Gaps = 29/438 (6%)

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
           P R+  P +    TL+  L     LD+AV  L  ++     P   T N ++  L +N   
Sbjct: 128 PRRSALPSVVD--TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARN--- 182

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
            R   LV  +F    +PN  T+N +I  LC +G L +A +L  RM A  C P+ VTY ++
Sbjct: 183 -RQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSL 241

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+G  K G   +  +++  M +     +   Y+ LI+   K G+ E A   + +M  +G 
Sbjct: 242 IDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGV 301

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
             N V +S  +D  C+ G   EA ++  +M   G   N FTY+SL+ G  ++G+   A+ 
Sbjct: 302 VANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIV 361

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +  +M     V N V Y+V++ GLC++GK+ EA  V + M   G K + + Y+++IHG  
Sbjct: 362 LLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHF 421

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
              + E AL L N+M       + DV  Y  L+  LCK   +  +  LL+ M   G  P+
Sbjct: 422 MNNNSERALDLLNQM--KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPN 479

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
            V     + A                     LFK  + S    ++  +L     P   T+
Sbjct: 480 TVIYTTIMDA---------------------LFKAGKESEAVALLHKILDSGFQPNVVTY 518

Query: 639 ERVVQELCRPKRIQAAIN 656
             ++  LC+   I  AI+
Sbjct: 519 CALIDGLCKAGSISEAIS 536


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 138/458 (30%), Positives = 241/458 (52%), Gaps = 23/458 (5%)

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           N   + + PN +TF+ ++  +     + +A++LF EM     EPD+ TY T+++GLCK  
Sbjct: 37  NMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMG 96

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
               A+ LL +M+  GC P  V ++ +I+ LCK+  +  A + +  M  +G  PN VTY+
Sbjct: 97  STTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYS 156

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           +++HG C  G  ++A SL  +MV    MP+ VT+  +++GL K G  ++   V  +M E+
Sbjct: 157 SILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEK 216

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               N   Y+ L+ G   + + ++A KL+  M+ KGC P+   Y+ LI G C+ G+ DEA
Sbjct: 217 GVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEA 276

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           + +L EM +     +  TYS+LMKGF + G+   A ++ ++M     + + + YS+++ G
Sbjct: 277 KGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDG 336

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC+ G L EA  +   M     +P++  Y+ +I G+CN G +E A +LF+ +       Q
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFV--KGIQ 394

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PDV TY ++++ L K    + + +L   M   GC P+  T N+ +               
Sbjct: 395 PDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQG------------- 441

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
                     +   TS   +++E M+ +  S  +ST++
Sbjct: 442 --------FLRNGDTSNAGRLIEEMVGRGFSADSSTFQ 471



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/394 (32%), Positives = 206/394 (52%), Gaps = 8/394 (2%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           AI+L   M +E  CK  V  ++++++ + ++ L   A+EF + +VN     I PN +T++
Sbjct: 101 AIQLLKKM-EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR---GISPNVVTYS 156

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            ++   C LG  + A  LF++M  RN  PD  T+  L+DGL KE  + EA  + + M   
Sbjct: 157 SILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEK 216

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P   T+N L++G C   ++  A KL + M  KGC P+  +YN LI G C  G +D+A
Sbjct: 217 GVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEA 276

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             LL  M      P+ VTY T++ G  + GR  D  ++L  M       +   YS ++ G
Sbjct: 277 KGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDG 336

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K+G  ++A +L K M E   +PN  +Y+ LI G+C  GK + A E+   +   G   +
Sbjct: 337 LCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPD 396

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY+ ++ G  + G  ++A E+++DMA + C+ N   Y+V+I G   +G    A  +  
Sbjct: 397 VVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIE 456

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +M+ RG   D    SS    L +  S +E + LF
Sbjct: 457 EMVGRGFSAD----SSTFQMLSDLESRDEIISLF 486



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 209/405 (51%), Gaps = 5/405 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA +++ A++LF  MV +   +  V ++++++N + + G    A++    +   +     
Sbjct: 60  KAKIID-AVKLFDEMV-KMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM---EEKGCK 114

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN + ++ +I ++C+  L+  A++   EM  R   P++ TY +++ G C   R +EA  L
Sbjct: 115 PNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSL 174

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             +M      P  VTFN+L++GL K G +  A  + + M  KG  PN  TYN L+ G C 
Sbjct: 175 FKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCS 234

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +  +D+A  L + MV   C P+  +Y  +I G  K GR  +   +L  M  +    +   
Sbjct: 235 QSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVT 294

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YSTL+ G  ++G+ +DA KL ++M   G  P+ + YS ++DGLC+ G  DEA E+L  M 
Sbjct: 295 YSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            +    N F Y+ L++G    GK   A E++ ++       + V Y+V+I GL + G   
Sbjct: 355 ESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSN 414

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           EA  ++  M   GC P+   Y+ +I G    G    A +L  EM+
Sbjct: 415 EACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMV 459


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 155/521 (29%), Positives = 253/521 (48%), Gaps = 65/521 (12%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  + K+Y +  L+++A+ + H +         V S+N+VL+  I+     R + F  ++
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVH-LAQAHGFMPGVLSYNAVLDATIRS---KRNISFAENV 192

Query: 181 VNAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
                   + PN  T+N++I+  C  G +D A+ LF +M  + C P++ TY TL+DG CK
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG----------ELGRAAKLVDN-- 287
             ++D+   LL  M + G  P  +++NV+INGLC+ G          E+ R    +D   
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312

Query: 288 -----------------------MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
                                  M   G  P+ +TY +LIH +C  GN+++A+  LD+M 
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PNE TY T+++G  + G   +  RVL  M +  F  +   Y+ LI+G    GK E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA+ + + M EKG  P+ V YS ++ G CR    DEA  +  EM+  G   +  TYSSL+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +GF E  +  +A +++++M +     +E  Y+ LI+  C +G L +A  +  +M+ +G  
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552

Query: 505 PDVVAYSSMIHGLCNAGSVEEA----LKLFNEMLCLEPKSQPDVFTYNI----------- 549
           PDVV YS +I+GL       EA    LKLF E      +S P   TY+            
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYE------ESVPSDVTYHTLIENCSNIEFK 606

Query: 550 ----LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
               L+   C +  ++ +  +  SM+ +   PD    NI +
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/432 (31%), Positives = 220/432 (50%), Gaps = 34/432 (7%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR-LDEAVLLLDEM 253
           F+LV+K+  RL L+D A+ +          P + +Y  ++D   +  R +  A  +  EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P   T+N+LI G C  G +  A  L D M  KGCLPN VTYNTLI G C    +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D    LL  M      PN ++Y  +INGL + GR  + + VL  M  R + ++E  Y+TL
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I G  KEG    A+ +  +M+  G  P+ + Y++LI  +C+ G  + A E L +M   G 
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  TY++L+ GF + G  ++A  + ++M  N    + V Y+ LI+G C  GK+ +A  
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML------------------C 535
           V   M  +G  PDVV+YS+++ G C +  V+EAL++  EM+                  C
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496

Query: 536 LEPKSQ---------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            + +++               PD FTY  L+NA C + ++  ++ L N M+++G  PD+V
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556

Query: 581 TCNIFLTALKEK 592
           T ++ +  L ++
Sbjct: 557 TYSVLINGLNKQ 568



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 200/399 (50%), Gaps = 54/399 (13%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++    +EG +H+AL  +  ++  +H  + P+ +T+  +I ++C+ G ++ A++  
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEML--RH-GLTPSVITYTSLIHSMCKAGNMNRAMEFL 368

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M VR   P+  TY TL+DG  ++  ++EA  +L EM  +G  P+ VT+N LING C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G++  A  ++++M  KG  P+ V+Y+T++ G C   ++D+A+ +   MV     P+ +TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++I G  +  R  +   +   M       +E+ Y+ LI+    EG  E A++L  +M+E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS-------------- 441
           KG  P+ V YS LI+GL +  +  EA+ +L ++       +  TY               
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608

Query: 442 -SLMKGF------------FES--GKGHK---------------------AVEIWKDMAK 465
            SL+KGF            FES  GK HK                     A  ++K+M K
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +  + + V    L+  L ++GK+ E   V   +L R C+
Sbjct: 669 SGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL-RSCE 706



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 166/350 (47%), Gaps = 36/350 (10%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEERKFHVNEYIYS 371
           +DKA+S++    A   MP  ++Y  +++  ++  R +  A  V   M E +   N + Y+
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI G    G  + A+ L+ +M  KGC PN V Y+ LIDG C++ K D+  ++L  M   
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  +Y+ ++ G    G+  +   +  +M +     +EV Y+ LI G C++G   +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQPDVFTY 547
            ++  +ML  G  P V+ Y+S+IH +C AG++  A++  ++M    LC      P+  TY
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC------PNERTY 383

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNE 605
             L++   ++  ++ +  +L  M D G  P +VT N  +    +  K+E           
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME----------- 432

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                           ++E M +K LSP   ++  V+   CR   +  A+
Sbjct: 433 ------------DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 188/404 (46%), Gaps = 19/404 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI     +G+       L +MR       E+++  +   + +   + EA R+   M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D       V ++N+++N     G    A+     + + K   + P+ ++++ V+   CR
Sbjct: 407 NDNGFSPSVV-TYNALINGHCVTGKMEDAIAV---LEDMKEKGLSPDVVSYSTVLSGFCR 462

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              VD A+++ REM  +  +PD  TY +L+ G C++ R  EA  L +EM   G  P   T
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LIN  C  G+L +A +L + M  KG LP+ VTY+ LI+GL  +    +A  LL ++ 
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582

Query: 325 ASKCMPNEVTYGTII---------------NGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             + +P++VTY T+I                G    G   +  +V  SM  +    +   
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ +I G  + G    A  L+K+M++ G   +TV   AL+  L + GK +E   ++  ++
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
            +   + A     L++     G     +++  +MAK+  + N +
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGI 746


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 252/500 (50%), Gaps = 43/500 (8%)

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           L+ +A+ ++ TM  EF  K T+ ++N++L+   + G   + L+  + +   +     PN 
Sbjct: 214 LMSKAVEVYRTM-GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEM---QRRGCAPND 269

Query: 193 LTFNLVIKTVCRLG-----------------------------------LVDNAIQLFRE 217
           +T+N++I  + + G                                   ++  A+ L  E
Sbjct: 270 VTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEE 329

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M ++   P + TY + + GLCK  R+ +A+  L +M  +   P  V++N LI G C+ G 
Sbjct: 330 MVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGN 389

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           L +A  L D +      P  VTYNTL+ GLC +G L+ A  L   M+     P+ VTY  
Sbjct: 390 LMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTI 449

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           ++NG  K+G           M      ++ Y Y+T I G  K G    A  L ++M+ KG
Sbjct: 450 LVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKG 509

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P+ ++Y+ ++DGLC++G  +EA E+L +M+++G   +  TY+S++    E+G+  K  
Sbjct: 510 FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGR 569

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           EI+ +M       + V Y+VLIHG    G+L  A + +++M  +G  P+V+ Y+S+I+GL
Sbjct: 570 EIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGL 629

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C    +++A   F EM  +E    P+ ++Y IL+N  C   N   ++ L   M+DRG  P
Sbjct: 630 CKVRRMDQAYNFFAEM--VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQP 687

Query: 578 DLVTCNIFLTALKE--KLEA 595
           D  T +  L  L +  KL+A
Sbjct: 688 DSCTHSALLKQLGKDCKLQA 707



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 242/504 (48%), Gaps = 26/504 (5%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +VK  + ++ V  ++ +  + L  ++ ++ ++   + P+    N +++ +    L+  A+
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSR---LSPDVKNCNRILRILRDKDLMSKAV 219

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +++R M     +P I TY TL+D  CK  ++ + + LL EMQ  GC P  VT+NVLINGL
Sbjct: 220 EVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            K GE  +A  L+  M   G   +  TYN LI+G   KG L +A+SL + MV     P  
Sbjct: 280 SKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTV 339

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            TY + I GL KLGR  D  + L  M       +   Y+TLI G  + G    A  L+ +
Sbjct: 340 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           +      P  V Y+ L+DGLCR G+ + A+++  EMIN G A +  TY+ L+ G  + G 
Sbjct: 400 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGS 459

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A E + +M       +   Y+  I G  + G    A  +  +ML++G  PD++ Y+ 
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           ++ GLC  G++EEA +L  +M+       PD  TY  +++A  +   +    ++   M+ 
Sbjct: 520 VVDGLCKLGNLEEASELLQKMVS--DGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLS 577

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
           +G  P +VT  + +     K                      R    F     M +K + 
Sbjct: 578 KGLTPSVVTYTVLIHGHAGK---------------------GRLERAFIYFSEMQEKGIL 616

Query: 633 PQTSTWERVVQELCRPKRIQAAIN 656
           P   T+  ++  LC+ +R+  A N
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYN 640



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 211/442 (47%), Gaps = 39/442 (8%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D T+  LI   +  G+F+  + ++  M +    V   ++  +   Y    ++ EA+ L  
Sbjct: 269 DVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQE 328

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV +     TV ++NS +  + + G    A++    + +    N+LP+ +++N +I   
Sbjct: 329 EMVLK-GASPTVATYNSFIYGLCKLGRMSDAMQ---QLSDMLANNLLPDVVSYNTLIYGY 384

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CRLG +  A  LF E+      P I TY TL+DGLC++  L+ A  L  EM  +G  P  
Sbjct: 385 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI 444

Query: 263 VTFNVLINGLCKNGEL-----------------------------------GRAAKLVDN 287
           VT+ +L+NG CK G L                                    RA  L + 
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  KG  P+ + YN ++ GLC  GNL++A  LL +MV+   +P+ VTY +II+  ++ GR
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
              G  +   M  +    +   Y+ LI G   +G+ E A   + +M EKG  PN + Y++
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI+GLC+V + D+A     EM+  G   N ++Y+ L+      G   +A+ ++K M    
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 468 CVYNEVCYSVLIHGLCEDGKLR 489
              +   +S L+  L +D KL+
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQ 706


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/476 (31%), Positives = 248/476 (52%), Gaps = 22/476 (4%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           + PN  T+N++I+  C +G +   +  F EM    C P++ TY TL+D  CK  R+DEA 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LL  M   G  P  +++NV+INGLC+ G +  A ++++ M  KG  P+EVTYNTL++G 
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK---LGRAVDGARVLMSMEERKFH 364
           C +GN  +A+ +   MV +   P+ VTY  +IN + K   L RA++       M  R   
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAME---FFDQMRIRGLR 182

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            NE  Y+TLI G  ++G   +A ++  +M E G  P+ V Y+A I G C + + +EA  +
Sbjct: 183 PNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGV 242

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           + EM+  G A +  +YS+++ GF   G+  +A ++ ++M +     + V YS LI GLCE
Sbjct: 243 VQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCE 302

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             +L EA  +  +ML  G  PD   Y+++I+  C  G + +AL L +EM  +     PD 
Sbjct: 303 MRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEM--IHKGFLPDA 360

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            TY++L+N L KQ+    +  LL  ++     P  VT +  +          ++ ++   
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLI----------ENCSNIEF 410

Query: 605 ELAIRLFKRQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +  + L K     G      ++ E M+++   P  + +  ++   CR   +  A N
Sbjct: 411 KSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFN 466



 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 140/455 (30%), Positives = 239/455 (52%), Gaps = 20/455 (4%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C   V ++N++++   + G   R  E +  + +     + PN +++N++I  +CR G + 
Sbjct: 41  CLPNVVTYNTLIDAYCKMG---RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMK 97

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
            A ++  EM  +   PD  TY TL++G CKE    +A+++  EM  +G  P+ VT+  LI
Sbjct: 98  EAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALI 157

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           N +CK   L RA +  D M ++G  PNE TY TLI G   +G L++A  +L+ M  S   
Sbjct: 158 NSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFS 217

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+ VTY   I+G   L R  +   V+  M E+    +   YST+ISG  ++G+ + A ++
Sbjct: 218 PSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQM 277

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            ++M+EKG  P+ V YS+LI GLC + +  EA ++  EM++ G   + FTY++L+  +  
Sbjct: 278 KQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCV 337

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G  +KA+ +  +M     + + V YSVLI+GL +  + REA+ +  +++     P  V 
Sbjct: 338 EGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVT 397

Query: 510 YSSMIH---------------GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           Y ++I                G C  G + EA ++F  M  +E   +P    YN++++  
Sbjct: 398 YDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESM--VERNHKPGEAVYNVIIHGH 455

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           C+  N+  + +L   M+  G  P  VT    + AL
Sbjct: 456 CRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKAL 490



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/394 (30%), Positives = 206/394 (52%), Gaps = 18/394 (4%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++LN   +EG +H+AL  +  +V      + P+ +T+  +I ++C+   ++ A++ F
Sbjct: 117 TYNTLLNGYCKEGNFHQALVIHAEMVRN---GVSPSVVTYTALINSMCKARNLNRAMEFF 173

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M +R   P+  TY TL+DG  ++  L+EA  +L+EM   G  P+ VT+N  I+G C  
Sbjct: 174 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 233

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +  A  +V  M  KG  P+ V+Y+T+I G C KG LD+A  +   MV     P+ VTY
Sbjct: 234 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 293

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++I GL ++ R  +   +   M +     +E+ Y+TLI+    EG    A+ L  +M+ 
Sbjct: 294 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 353

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM----------- 444
           KG  P+ V YS LI+GL +  +  EA+ +LF++I      +  TY +L+           
Sbjct: 354 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 413

Query: 445 ----KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
               KGF   G  H+A  +++ M + N    E  Y+V+IHG C  G L +A  ++ +M+ 
Sbjct: 414 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 473

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
            G  P  V   ++I  L   G  EE  ++  + L
Sbjct: 474 SGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTL 507



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 193/404 (47%), Gaps = 20/404 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  Y   G+F    ++   M R        ++  +  +  KA  +  A+  F  M
Sbjct: 117 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 176

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                 +   +++ ++++   ++GL + A    N +  +      P+ +T+N  I   C 
Sbjct: 177 RIR-GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES---GFSPSVVTYNAFIHGHCV 232

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           L  ++ A+ + +EM  +   PD+ +Y T++ G C++  LD A  +  EM   G  P  VT
Sbjct: 233 LERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVT 292

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LI GLC+   L  A  L   M   G  P+E TY TLI+  C++G+L+KA+ L D M+
Sbjct: 293 YSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMI 352

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS--------- 375
               +P+ VTY  +INGL K  R  +  R+L  +   +   ++  Y TLI          
Sbjct: 353 HKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKS 412

Query: 376 ------GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
                 G   +G   +A ++++ M+E+  KP   VY+ +I G CR G   +A  +  EMI
Sbjct: 413 VVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMI 472

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           ++G   +  T  +L+K  F+ G   +  E+  D  + +C  NE 
Sbjct: 473 HSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLR-SCRLNEA 515



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 135/321 (42%), Gaps = 68/321 (21%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF---IFIFKAYGKAHLV----E 135
           + T+ +LI  ++  G       +L  M        E  F   +  + A+   H V    E
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEM-------TESGFSPSVVTYNAFIHGHCVLERME 237

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ +   MV++      V S++++++   ++G   RA +    +V      + P+ +T+
Sbjct: 238 EALGVVQEMVEKGLAPDVV-SYSTIISGFCRKGELDRAFQMKQEMVEK---GVSPDAVTY 293

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           + +I+ +C +  +  A  L +EM      PD +TY TL++  C E  L++A+ L DEM  
Sbjct: 294 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 353

Query: 256 DGCFPTPVTFNVLINGL----------------------------------CKNGELGRA 281
            G  P  VT++VLINGL                                  C N E    
Sbjct: 354 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 413

Query: 282 AKLVDNMFLKGCL----------------PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             L+    +KG +                P E  YN +IHG C  GNL KA +L   M+ 
Sbjct: 414 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 473

Query: 326 SKCMPNEVTYGTIINGLVKLG 346
           S  +P+ VT  T+I  L K G
Sbjct: 474 SGFVPHTVTVITLIKALFKEG 494



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 91/193 (47%), Gaps = 23/193 (11%)

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M ++    N   Y++LI G C  G+L++    + +M   GC P+VV Y+++I   C  G 
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           ++EA  L   M       QP++ +YN+++N LC++ ++  + ++L  M  +G  PD VT 
Sbjct: 61  IDEAFGLLKSMSS--KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTY 118

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           N  L    ++        +F   L I                 M++  +SP   T+  ++
Sbjct: 119 NTLLNGYCKE-------GNFHQALVIHA--------------EMVRNGVSPSVVTYTALI 157

Query: 643 QELCRPKRIQAAI 655
             +C+ + +  A+
Sbjct: 158 NSMCKARNLNRAM 170


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 225/436 (51%), Gaps = 5/436 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FN V++ + +EG    A   ++ +   K M  LP+ +TFN +I    + G +D   Q
Sbjct: 188 VFTFNIVIDFLCKEGELAEARSLFSRM---KEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L  EM    C+ D+ TY  L++  CK  R++ A      M+ +G     VTF+  ++  C
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G +  A KL   M ++G   NE TY  LI G C  G LD A+ LLD MV      N V
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +++GL K  +  +   VL  ME+     NE +Y+TLI G F    +E A+ L  +M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             KG + +  +Y ALI GLC V K DEA+ +L +M  +G   N   Y+++M   F+SGK 
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ + + +  +    N + Y  LI GLC+ G + EA   + +M   G  P+V AY+++
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           + GLC  G + EA++LFNEM  +      D   Y  LL+   KQ N+  +  L   M+D 
Sbjct: 545 VDGLCKNGCLNEAVQLFNEM--VHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602

Query: 574 GCDPDLVTCNIFLTAL 589
           G   DL     F++  
Sbjct: 603 GLQLDLFCYTCFISGF 618



 Score =  245 bits (625), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 248/486 (51%), Gaps = 6/486 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  +I      G+      +  RM+    +    +F  +   YGK   ++E  +L   M
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                CK  V ++N+++N   + G    A   Y +    K   ++ N +TF+  +   C+
Sbjct: 250 -RRSGCKADVVTYNALINCFCKFGRMETA---YGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLV  A++LF +M VR    + +TY  L+DG CK  RLD+A++LLDEM   G     VT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + VL++GLCK  ++  A  ++  M   G   NE+ Y TLIHG  +  N +KA+ LL  M 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 +   YG +I GL  + +  +   +L  M+E     N  IY+T++   FK GK  
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ + +++++ G +PN + Y ALIDGLC+ G  DEA     +M + G   N   Y++L+
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++G  ++AV+++ +M       ++V Y+ L+ G  + G L +A  +  +M+  G +
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D+  Y+  I G CN   + EA ++F+EM  +     PD   YN L++   K  N+  +I
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEM--IGHGIAPDRAVYNCLISKYQKLGNLEEAI 663

Query: 565 DLLNSM 570
            L + M
Sbjct: 664 SLQDEM 669



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 230/455 (50%), Gaps = 11/455 (2%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKS--FNSVLNVIIQEGLYHRALEFYNHIVNAK 184
           A  + HL    + L H        +R+  +   +++L+V+   GL   A+     +   +
Sbjct: 93  ALRRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVR---AVARVR 149

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
            + + PNT T N ++  + R        +LF ++P     P+++T+  ++D LCKE  L 
Sbjct: 150 ELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA----PNVFTFNIVIDFLCKEGELA 205

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L   M+  GC P  VTFN LI+G  K GEL    +LV+ M   GC  + VTYN LI
Sbjct: 206 EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALI 265

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +  C  G ++ A      M     M N VT+ T ++   K G   +  ++   M  R   
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           +NE+ Y+ LI G  K G+ +DA+ L  +M+ +G   N V Y+ L+DGLC+  K  EAE++
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L  M   G  AN   Y++L+ G F +    KA+ +  +M       +   Y  LI GLC 
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             KL EA+ + T+M   G +P+ + Y++M+     +G V EA+ +  ++  L+   QP+V
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI--LDSGFQPNV 503

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            TY  L++ LCK  +I  +I   N M D G DP++
Sbjct: 504 ITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV 538



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 177/383 (46%), Gaps = 8/383 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF + +  +   G  +    +  +MR     + E ++  +     KA  +++AI L   M
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGL--YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           V      R     N V   ++ +GL    +  E  + +   +   +  N L +  +I   
Sbjct: 355 V------RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
                 + A+ L  EM  +  E DI  Y  L+ GLC  ++LDEA  LL +M   G  P  
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           + +  +++   K+G++  A  ++  +   G  PN +TY  LI GLC  G++D+A+S  ++
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M      PN   Y  +++GL K G   +  ++   M  +   +++ +Y+ L+ G  K+G 
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             DA  L  +M++ G + +   Y+  I G C +    EA E+  EMI +G A +   Y+ 
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648

Query: 443 LMKGFFESGKGHKAVEIWKDMAK 465
           L+  + + G   +A+ +  +M +
Sbjct: 649 LISKYQKLGNLEEAISLQDEMER 671



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 152/332 (45%), Gaps = 20/332 (6%)

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+++ L   G   D  R +  + E +   N    + ++  L ++       +L +++ E+
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSG----RLVRRLFEQ 182

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
              PN   ++ +ID LC+ G+  EA  +   M   GC  +  T++SL+ G+ + G+  + 
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            ++ ++M ++ C  + V Y+ LI+  C+ G++  A   +  M   G   +VV +S+ +  
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C  G V EA+KLF +M         + FTY  L++  CK   +  +I LL+ M+ +G  
Sbjct: 303 FCKEGLVREAMKLFAQMRV--RGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360

Query: 577 PDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIRL------------FKRQRTSGGFKI 622
            ++VT  + +  L  + K+   +D    + +  +R             F  + +     +
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  M  K L    S +  ++Q LC   ++  A
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDEA 452


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 168/604 (27%), Positives = 285/604 (47%), Gaps = 60/604 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL-EKSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+  LI+ Y         E VL  M+ E  +V  E+++  +   Y +   +++A+RL   
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+     K  +   NS++N   + G  H A      +V+    N+ P++ ++N ++   C
Sbjct: 358 ML-RLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD---WNLKPDSYSYNTLLDGYC 413

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G    A  L  +M     EP + TY TL+ GLC+    D+A+ +   M   G  P  V
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 473

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            ++ L++GL K      A+ L  ++  +G   + +T+NT+I GLC  G + +A  + D+M
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
               C P+ +TY T+I+G  K        +V  +ME      +  +Y++LISGLFK  + 
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 593

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +   L  +M  +G  PN V Y ALIDG C+ G  D+A    FEM  NG +AN    S++
Sbjct: 594 VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 444 MKGFFESGK----------------------------GHKAVEIWKDMAKNNC----VYN 471
           + G +  G+                             + A++   D    +C    + N
Sbjct: 654 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPN 713

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + Y++ I GLC+ GK+ +AR  ++ +  +G  PD   Y ++IHG   AG+V+EA +L +
Sbjct: 714 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRD 773

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           EM  L     P++ TYN L+N LCK  N+  +  L + +  +G  P++VT N  +     
Sbjct: 774 EM--LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI----- 826

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                 DG            K       FK+ + M+++ +SP   T+  ++  LC+   I
Sbjct: 827 ------DG----------YCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDI 870

Query: 652 QAAI 655
           + ++
Sbjct: 871 ERSM 874



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 225/446 (50%), Gaps = 22/446 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           VE  I  +H++++ +     V++   VL  + ++G+                     N +
Sbjct: 257 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR-------------------NVV 297

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           T+ L+IK  C+   +D A ++ R M       PD   Y  L+DG C+  ++D+AV LLDE
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   G        N LING CK GE+  A  ++  M      P+  +YNTL+ G C +G+
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
             +A +L D+M+     P  +TY T++ GL ++G   D  ++   M +R    +E  YST
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ GLFK    E A  LWK ++ +G   + + ++ +I GLC++GK  EAEEI  +M + G
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C+ +  TY +L+ G+ ++    +A ++   M +     +   Y+ LI GL +  +L E  
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 597

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            + T+M  RG  P++V Y ++I G C  G +++A   + EM   E     ++   + +++
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM--TENGLSANIIICSTMVS 655

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPD 578
            L +   I  +  L+  M+D G  PD
Sbjct: 656 GLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 236/531 (44%), Gaps = 38/531 (7%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           ++  F  +  + + +  VKS+  +++++ +  +Y     + N +V+        N +   
Sbjct: 85  SLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIW-- 142

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
                       D  + ++RE        D+     +  GL K      A+ + D M   
Sbjct: 143 ------------DELVGVYREFAFSPTVFDMILKVYVEKGLTKN-----ALYVFDNMGKC 185

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P+  + N L+N L KNGE   A  +   M   G +P+    + +++  C  G +D+A
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
              + +M      PN VTY ++ING V LG       VL  M E+    N   Y+ LI G
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305

Query: 377 LFKEGKAEDAMKLWKQMMEKGC-KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
             K+ K ++A K+ + M E+    P+   Y  LIDG CR GK D+A  +L EM+  G   
Sbjct: 306 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT 365

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N F  +SL+ G+ + G+ H+A  +   M   N   +   Y+ L+ G C +G   EA  + 
Sbjct: 366 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +ML  G +P V+ Y++++ GLC  G+ ++AL++++ M  ++    PD   Y+ LL+ L 
Sbjct: 426 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM--MKRGVAPDEVGYSTLLDGLF 483

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---------------KEKLEAPQDGT 600
           K  N   +  L   ++ RG     +T N  ++ L                + L    DG 
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
            +   L     K       FK+   M ++ +SP    +  ++  L + +R+
Sbjct: 544 TY-RTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 593



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 214/481 (44%), Gaps = 36/481 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L++     G F     + + M +      E  +  +     K    E A  L+  +
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +     K  + +FN++++ + + G    A E ++ +   K +   P+ +T+  +I   C+
Sbjct: 499 LARGFTKSRI-TFNTMISGLCKMGKMVEAEEIFDKM---KDLGCSPDGITYRTLIDGYCK 554

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V  A ++   M      P I  Y +L+ GL K  RL E   LL EM + G  P  VT
Sbjct: 555 ASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 614

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+G CK G L +A      M   G   N +  +T++ GL   G +D+A  L+ +MV
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 325 --------------------------------ASKCMPNEVTYGTIINGLVKLGRAVDGA 352
                                            +  +PN + Y   I GL K G+  D  
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R    +  + F  + + Y TLI G    G  ++A +L  +M+ +G  PN V Y+ALI+GL
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+    D A+ +  ++   G   N  TY++L+ G+ + G    A ++   M +     + 
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V YS LI+GLC+ G +  +  +  QM+  G    ++ Y +++ G   +G +++  KL++ 
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLYDM 914

Query: 533 M 533
           M
Sbjct: 915 M 915



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 196/417 (47%), Gaps = 37/417 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF ++I      G     E +  +M+         ++  +   Y KA  V +A ++   M
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E     +++ +NS+++ + +     R +E  + +       + PN +T+  +I   C+
Sbjct: 569 ERE-PISPSIEMYNSLISGLFKS---RRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCK 624

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG------C 258
            G++D A   + EM       +I    T++ GL +  R+DEA LL+ +M   G      C
Sbjct: 625 EGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHEC 684

Query: 259 F--------------------------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           F                          P  + +N+ I GLCK G++  A +    + LKG
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +P+  TY TLIHG    GN+D+A  L D M+    +PN VTY  +INGL K        
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R+   + ++    N   Y+TLI G  K G  + A KL  +M+E+G  P+ V YSALI+GL
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           C+ G  + + ++L +MI  G  +    Y +L++G+  SG+  K  +++ DM    C+
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLY-DMMHIRCL 920



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 119/223 (53%), Gaps = 1/223 (0%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           +LPN + +N+ I  +C+ G VD+A + F  + ++   PD +TYCTL+ G      +DEA 
Sbjct: 710 LLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAF 769

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L DEM   G  P  VT+N LINGLCK+  + RA +L   +  KG  PN VTYNTLI G 
Sbjct: 770 RLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGY 829

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  GN+D A  L D+M+     P+ VTY  +INGL K G      ++L  M +       
Sbjct: 830 CKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKL 889

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
             Y TL+ G  + G+ +   KL+  MM   C   T +    +D
Sbjct: 890 IEYCTLVQGYIRSGEMQKIHKLY-DMMHIRCLSTTAISHKQVD 931


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 168/604 (27%), Positives = 285/604 (47%), Gaps = 60/604 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL-EKSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+  LI+ Y         E VL  M+ E  +V  E+++  +   Y +   +++A+RL   
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+     K  +   NS++N   + G  H A      +V+    N+ P++ ++N ++   C
Sbjct: 358 ML-RLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD---WNLKPDSYSYNTLLDGYC 413

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G    A  L  +M     EP + TY TL+ GLC+    D+A+ +   M   G  P  V
Sbjct: 414 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEV 473

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            ++ L++GL K      A+ L  ++  +G   + +T+NT+I GLC  G + +A  + D+M
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
               C P+ +TY T+I+G  K        +V  +ME      +  +Y++LISGLFK  + 
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRL 593

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +   L  +M  +G  PN V Y ALIDG C+ G  D+A    FEM  NG +AN    S++
Sbjct: 594 VEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 444 MKGFFESGK----------------------------GHKAVEIWKDMAKNNC----VYN 471
           + G +  G+                             + A++   D    +C    + N
Sbjct: 654 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPN 713

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + Y++ I GLC+ GK+ +AR  ++ +  +G  PD   Y ++IHG   AG+V+EA +L +
Sbjct: 714 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRD 773

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           EM  L     P++ TYN L+N LCK  N+  +  L + +  +G  P++VT N  +     
Sbjct: 774 EM--LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI----- 826

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                 DG            K       FK+ + M+++ +SP   T+  ++  LC+   I
Sbjct: 827 ------DG----------YCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDI 870

Query: 652 QAAI 655
           + ++
Sbjct: 871 ERSM 874



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 177/632 (28%), Positives = 287/632 (45%), Gaps = 87/632 (13%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI----FKAYGKAHLVEEAIRLFHTM 144
           LI  Y  +G       +L  M R    +  K+ +FI       Y K   + EA  +   M
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLR----LGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           VD ++ K    S+N++L+   +EG    A    + ++      I P  LT+N ++K +CR
Sbjct: 394 VD-WNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE---GIEPTVLTYNTLLKGLCR 449

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G  D+A+Q++  M      PD   Y TL+DGL K    + A  L  ++   G   + +T
Sbjct: 450 VGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA-------- 316
           FN +I+GLCK G++  A ++ D M   GC P+ +TY TLI G C   N+ +A        
Sbjct: 510 FNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAME 569

Query: 317 ---------------------------VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
                                        LL  M      PN VTYG +I+G  K G   
Sbjct: 570 REXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLD 629

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG------------ 397
                   M E     N  I ST++SGL++ G+ ++A  L ++M++ G            
Sbjct: 630 KAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSD 689

Query: 398 ----------------CK----PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
                           CK    PN +VY+  I GLC+ GK D+A      +   G   + 
Sbjct: 690 IRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDN 749

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           FTY +L+ G+  +G   +A  +  +M +   V N V Y+ LI+GLC+   +  A+ ++ +
Sbjct: 750 FTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHK 809

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           +  +G  P+VV Y+++I G C  G+++ A KL ++M+  E    P V TY+ L+N LCK 
Sbjct: 810 LHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI--EEGISPSVVTYSALINGLCKH 867

Query: 558 SNISHSIDLLNSMMDRGCDPDLVT-CNI----FLTALKEKLEAPQDGTDFLNELAIRLFK 612
            +I  S+ LLN M+  G D  L+  C +    F T+   ++  P+     +N   +  FK
Sbjct: 868 GDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNEMSKPEALKQNMNCFLLPKFK 927

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
                 G   ++  ++ F  P+ + W  ++ E
Sbjct: 928 HSWKFVGVVALDCPIRIF-GPKGTIWFNLINE 958



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 224/446 (50%), Gaps = 22/446 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           VE  I  +H++++ +     V++   VL  + ++G+                     N +
Sbjct: 257 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR-------------------NVV 297

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           T+ L+IK  C+   +D A ++ R M       PD   Y  L+DG C+  ++D+AV LLDE
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   G        N LING CK GE+  A  ++  M      P+  +YNTL+ G C +G+
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
             +A +L D+M+     P  +TY T++ GL ++G   D  ++   M +     +E  YST
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYST 477

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ GLFK    E A  LWK ++ +G   + + ++ +I GLC++GK  EAEEI  +M + G
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C+ +  TY +L+ G+ ++    +A ++   M +     +   Y+ LI GL +  +L E  
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXT 597

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            + T+M  RG  P++V Y ++I G C  G +++A   + EM   E     ++   + +++
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM--TENGLSANIIICSTMVS 655

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPD 578
            L +   I  +  L+  M+D G  PD
Sbjct: 656 GLYRLGRIDEANLLMQKMVDHGFFPD 681



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 236/512 (46%), Gaps = 67/512 (13%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SLI  Y   G+    E V+ RM          S+  +   Y +     EA  L   M+ E
Sbjct: 372 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 431

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV----------------------NAKH 185
              + TV ++N++L  + + G +  AL+ ++ ++                      N + 
Sbjct: 432 -GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEG 490

Query: 186 MNIL----------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
            + L           + +TFN +I  +C++G +  A ++F +M    C PD  TY TL+D
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           G CK + + +A  +   M+ +   P+   +N LI+GL K+  L     L+  M ++G  P
Sbjct: 551 GYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTP 610

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N VTY  LI G C +G LDKA S    M  +    N +   T+++GL +LGR +D A +L
Sbjct: 611 NIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGR-IDEANLL 669

Query: 356 M------------------------------SMEE--RKFHV-NEYIYSTLISGLFKEGK 382
           M                              S++E  + F + N  +Y+  I+GL K GK
Sbjct: 670 MQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGK 729

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +DA + +  +  KG  P+   Y  LI G    G  DEA  +  EM+  G   N  TY++
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNA 789

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G  +S    +A  ++  + +     N V Y+ LI G C+ G +  A  +  +M+  G
Sbjct: 790 LINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEG 849

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
             P VV YS++I+GLC  G +E ++KL N+M+
Sbjct: 850 ISPSVVTYSALINGLCKHGDIERSMKLLNQMI 881



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 236/531 (44%), Gaps = 38/531 (7%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           ++  F  +  + + +  VKS+  +++++ +  +Y     + N +V+        N +   
Sbjct: 85  SLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIW-- 142

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
                       D  + ++RE        D+     +  GL K      A+ + D M   
Sbjct: 143 ------------DELVGVYREFAFSPTVFDMILKVYVEKGLTKN-----ALYVFDNMGKC 185

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P+  + N L+N L KNGE   A  +   M   G +P+    + +++  C  G +D+A
Sbjct: 186 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 245

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
              + +M      PN VTY ++ING V LG       VL  M E+    N   Y+ LI G
Sbjct: 246 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 305

Query: 377 LFKEGKAEDAMKLWKQMMEKGC-KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
             K+ K ++A K+ + M E+    P+   Y  LIDG CR GK D+A  +L EM+  G   
Sbjct: 306 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT 365

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N F  +SL+ G+ + G+ H+A  +   M   N   +   Y+ L+ G C +G   EA  + 
Sbjct: 366 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 425

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +ML  G +P V+ Y++++ GLC  G+ ++AL++++ M  ++    PD   Y+ LL+ L 
Sbjct: 426 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM--MKXGVAPDEVGYSTLLDGLF 483

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---------------KEKLEAPQDGT 600
           K  N   +  L   ++ RG     +T N  ++ L                + L    DG 
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
            +   L     K       FK+   M ++ +SP    +  ++  L + +R+
Sbjct: 544 TY-RTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRL 593



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 187/398 (46%), Gaps = 36/398 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF ++I      G     E +  +M+         ++  +   Y KA  V +A ++   M
Sbjct: 509 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E     +++ +NS+++ + +     R +E  + +       + PN +T+  +I   C+
Sbjct: 569 ERE-XISPSIEMYNSLISGLFKS---RRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCK 624

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG------C 258
            G++D A   + EM       +I    T++ GL +  R+DEA LL+ +M   G      C
Sbjct: 625 EGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHEC 684

Query: 259 F--------------------------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           F                          P  + +N+ I GLCK G++  A +    + LKG
Sbjct: 685 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 744

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +P+  TY TLIHG    GN+D+A  L D M+    +PN VTY  +INGL K        
Sbjct: 745 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 804

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R+   + ++    N   Y+TLI G  K G  + A KL  +M+E+G  P+ V YSALI+GL
Sbjct: 805 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGL 864

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           C+ G  + + ++L +MI  G  +    Y +L++G F++
Sbjct: 865 CKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKT 902


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 256/505 (50%), Gaps = 40/505 (7%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH-------MNILPNTLTFNL 197
           +D F     V S N ++N + +           NH+V A         + I P+ +TFN 
Sbjct: 118 MDLFGVTHNVYSLNILINCLCR----------LNHVVFAISVLGKMFKLGIQPDAITFNT 167

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I   C  G +  A+ LF EM  R  +PD+ +Y T+++GLCK      A+ LL +M+  G
Sbjct: 168 LINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKG 227

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C P  V +  +I+ LCK+  +  A  L+  M  +G  P+ VTY+T++HG C  G+L++A 
Sbjct: 228 CKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEAT 287

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            L + MV    MPN VT+  +++GL K G   +   V  +M ++    N Y Y+ L+ G 
Sbjct: 288 ILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGY 347

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
               + ++A K+   M++KGC P    Y+ LI+G C+  + DEA+ +L EM       + 
Sbjct: 348 CLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDT 407

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TYS+LM+G  + G+  +A+ ++K+M  +  + + + YS L+ GLC+ G L EA  +   
Sbjct: 408 VTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKS 467

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M     +PD+V Y+ +I G+  AG +E A +LF+++       QP + TY I++  L K+
Sbjct: 468 MQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFA--DGIQPTIRTYTIMIKGLLKE 525

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
                + +L   M D G  P+  + N+ +                         + Q +S
Sbjct: 526 GLSDEAYELFRKMEDDGFLPNSCSYNVIIQG---------------------FLQNQDSS 564

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVV 642
              ++++ M+ K  S  +ST++ ++
Sbjct: 565 TAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/498 (30%), Positives = 247/498 (49%), Gaps = 33/498 (6%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           MN  P+ + F   + ++ +       + L  +M +     ++Y+   L++ LC+ N +  
Sbjct: 86  MNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVF 145

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ +L +M   G  P  +TFN LING C  GE+  A  L + M  +G  P+ ++Y+T+I+
Sbjct: 146 AISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVIN 205

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  GN   A+ LL +M    C PN V Y TII+ L K     D   +L  M +R    
Sbjct: 206 GLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPP 265

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   YST++ G    G   +A  L+ +M+ +   PNTV ++ L+DGLC+ G   EA  + 
Sbjct: 266 DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M   G   NA+TY++LM G+  + +  +A ++   M    C      Y++LI+G C+ 
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            +L EA+ +  +M  +   PD V YS+++ GLC  G  +EAL LF EM        PD+ 
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEM--CSSGLLPDLM 443

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQ------ 597
           TY+ LL+ LCK  ++  ++ LL SM +   +PD+V  NI +  +    KLE  +      
Sbjct: 444 TYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKL 503

Query: 598 --DGT----------------DFLNELAIRLFKRQRTSGGFK---IVEVMLQKFLSPQ-T 635
             DG                 + L++ A  LF++    G         V++Q FL  Q +
Sbjct: 504 FADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDS 563

Query: 636 STWERVVQELCRPKRIQA 653
           ST  R++ E+   KR  A
Sbjct: 564 STAIRLIDEMV-GKRFSA 580



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 178/362 (49%), Gaps = 23/362 (6%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+ V +   +  +  K      VSL ++M       N  +   +IN L +L   V    V
Sbjct: 90  PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M +     +   ++TLI+G   EG+ ++A+ L+ +M+ +G +P+ + YS +I+GLC+
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCK 209

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G    A ++L +M   GC  N   Y++++    +    + A+++  +M       + V 
Sbjct: 210 SGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVT 269

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           YS ++HG C  G L EA +++ +M+ R   P+ V ++ ++ GLC  G V EA  +F  M 
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
             +  ++P+ +TYN L++  C  + +  +  +L+ M+D+GC P + + NI +        
Sbjct: 330 --KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGY----- 382

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                            KR+R      ++  M +K L+P T T+  ++Q LC+  R Q A
Sbjct: 383 ----------------CKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEA 426

Query: 655 IN 656
           +N
Sbjct: 427 LN 428



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 113/221 (51%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P   ++N++I   C+   +D A  L  EM  +   PD  TY TLM GLC+  R  EA+ L
Sbjct: 370 PVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNL 429

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM   G  P  +T++ L++GLCK+G L  A KL+ +M      P+ V YN LI G+ +
Sbjct: 430 FKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFI 489

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L+ A  L  ++ A    P   TY  +I GL+K G + +   +   ME+  F  N   
Sbjct: 490 AGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCS 549

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
           Y+ +I G  +   +  A++L  +M+ K    ++  +  L+D
Sbjct: 550 YNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 225/436 (51%), Gaps = 5/436 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FN V++ + +EG    A   ++ +   K M  LP+ +TFN +I    + G +D   Q
Sbjct: 188 VFTFNIVIDFLCKEGELAEARSLFSRM---KEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L  EM    C+ D+ TY  L++  CK  R++ A      M+ +G     VTF+  ++  C
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G +  A KL   M ++G   NE TY  LI G C  G LD A+ LLD MV      N V
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +++GL K  +  +   VL  ME+     NE +Y+TLI G F    +E A+ L  +M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             KG + +  +Y ALI GLC V K DEA+ +L +M  +G   N   Y+++M   F+SGK 
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ + + +  +    N + Y  LI GLC+ G + EA   + +M   G  P+V AY+++
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           + GLC  G + EA++LFNEM  +      D   Y  LL+   KQ N+  +  L   M+D 
Sbjct: 545 VDGLCKNGCLNEAVQLFNEM--VHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDS 602

Query: 574 GCDPDLVTCNIFLTAL 589
           G   DL     F++  
Sbjct: 603 GLQLDLFCYTCFISGF 618



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 248/486 (51%), Gaps = 6/486 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  +I      G+      +  RM+    +    +F  +   YGK   ++E  +L   M
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                CK  V ++N+++N   + G    A   Y +    K   ++ N +TF+  +   C+
Sbjct: 250 -RRSGCKADVVTYNALINCFCKFGRMETA---YGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLV  A++LF +M VR    + +TY  L+DG CK  RLD+A++LLDEM   G     VT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + VL++GLCK  ++  A  ++  M   G   NE+ Y TLIHG  +  N +KA+ LL  M 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 +   YG +I GL  + +  +   +L  M+E     N  IY+T++   FK GK  
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ + +++++ G +PN + Y ALIDGLC+ G  DEA     +M + G   N   Y++L+
Sbjct: 486 EAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALV 545

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++G  ++AV+++ +M       ++V Y+ L+ G  + G L +A  +  +M+  G +
Sbjct: 546 DGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQ 605

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D+  Y+  I G CN   + EA ++F+EM  +     PD   YN L++   K  N+  +I
Sbjct: 606 LDLFCYTCFISGFCNLNMMPEAREVFSEM--IGHGIAPDRAVYNCLISKYQKLGNLEEAI 663

Query: 565 DLLNSM 570
            L + M
Sbjct: 664 SLQDEM 669



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/455 (31%), Positives = 231/455 (50%), Gaps = 11/455 (2%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKS--FNSVLNVIIQEGLYHRALEFYNHIVNAK 184
           A  + HL    + L H        +R+  +   +++L+V+   GL   A+     +   +
Sbjct: 93  ALRRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVR---AVARVR 149

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
            + + PNT T N ++  + R    D + +L R +  +   P+++T+  ++D LCKE  L 
Sbjct: 150 ELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELA 205

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L   M+  GC P  VTFN LI+G  K GEL    +LV+ M   GC  + VTYN LI
Sbjct: 206 EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALI 265

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +  C  G ++ A      M     M N VT+ T ++   K G   +  ++   M  R   
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           +NE+ Y+ LI G  K G+ +DA+ L  +M+ +G   N V Y+ L+DGLC+  K  EAE++
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L  M   G  AN   Y++L+ G F +    KA+ +  +M       +   Y  LI GLC 
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             KL EA+ + T+M   G +P+ + Y++M+     +G V EA+ +  ++  L+   QP+V
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKI--LDSGFQPNV 503

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            TY  L++ LCK  +I  +I   N M D G DP++
Sbjct: 504 ITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV 538



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 177/383 (46%), Gaps = 8/383 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF + +  +   G  +    +  +MR     + E ++  +     KA  +++AI L   M
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGL--YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           V      R     N V   ++ +GL    +  E  + +   +   +  N L +  +I   
Sbjct: 355 V------RQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH 408

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
                 + A+ L  EM  +  E DI  Y  L+ GLC  ++LDEA  LL +M   G  P  
Sbjct: 409 FMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNY 468

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           + +  +++   K+G++  A  ++  +   G  PN +TY  LI GLC  G++D+A+S  ++
Sbjct: 469 IIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNK 528

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M      PN   Y  +++GL K G   +  ++   M  +   +++ +Y+ L+ G  K+G 
Sbjct: 529 MRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGN 588

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             DA  L  +M++ G + +   Y+  I G C +    EA E+  EMI +G A +   Y+ 
Sbjct: 589 LHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNC 648

Query: 443 LMKGFFESGKGHKAVEIWKDMAK 465
           L+  + + G   +A+ +  +M +
Sbjct: 649 LISKYQKLGNLEEAISLQDEMER 671



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 152/332 (45%), Gaps = 20/332 (6%)

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+++ L   G   D  R +  + E +   N    + ++  L ++       +L +++ E+
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSG----RLVRRLFEQ 182

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
              PN   ++ +ID LC+ G+  EA  +   M   GC  +  T++SL+ G+ + G+  + 
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            ++ ++M ++ C  + V Y+ LI+  C+ G++  A   +  M   G   +VV +S+ +  
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C  G V EA+KLF +M         + FTY  L++  CK   +  +I LL+ M+ +G  
Sbjct: 303 FCKEGLVREAMKLFAQMRV--RGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360

Query: 577 PDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIRL------------FKRQRTSGGFKI 622
            ++VT  + +  L  + K+   +D    + +  +R             F  + +     +
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  M  K L    S +  ++Q LC   ++  A
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDEA 452


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 254/490 (51%), Gaps = 6/490 (1%)

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCKRTVKSFNS 159
           ++++VL RM +   +    S+  + K     +  +EA+ L   M D+   C   V S+ +
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           V+N   +EG   +A   Y+ +++     ILPN +T++ +I  +C+   +D A+++   M 
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLD---RGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                P+  TY +++ G C   +  EA+  L +M  DG  P  VT+N L++ LCKNG   
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A K+ D+M  +G  P   TY TL+ G   KG L +   LLD MV +   PN   +  +I
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
               K G+      V   M ++  + +   Y T+I  L K G+ EDAM+ ++QM+++   
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P  +VY++LI  LC   K D+A+E++ EM++ G   +   ++S++    + G+  ++ ++
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           +  M +     + + YS LI G C  GK+ EA  +   M+S G KPD V Y+++I+G C 
Sbjct: 502 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
              +E+AL LF EM        PD+ TYNI+L  L +    + + +L   + + G   +L
Sbjct: 562 ISRMEDALVLFREM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 580 VTCNIFLTAL 589
            T NI L  L
Sbjct: 620 STYNIILHGL 629



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 233/486 (47%), Gaps = 28/486 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  YN +  A    + PN  T+ ++I + C  G +D        +  +    D   +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 233 LMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           L+ GLC + R  +A+ ++L  M   GC P   ++N+L+ GLC       A +L+  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 292 G--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
           G  C P+ V+Y T+I+G   +G+LDKA      M+    +PN VTY +II  L K  +A+
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK-AQAM 250

Query: 350 DGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
           D A  VL SM +     N   Y++++ G    G+ ++A+   K+M   G +P+ V Y++L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           +D LC+ G+  EA ++   M   G      TY +L++G+   G   +   +   M +N  
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N   +S+LI    + GK+ +A +V+++M  +G  PD V Y ++I  LC +G VE+A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            F +M  ++ +  P    YN L+++LC       + +L+  M+DRG   D +        
Sbjct: 431 YFEQM--IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-------- 480

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                        F N +     K  R     K+ ++M++  + P   T+  ++   C  
Sbjct: 481 -------------FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527

Query: 649 KRIQAA 654
            ++  A
Sbjct: 528 GKMDEA 533



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 173/360 (48%), Gaps = 22/360 (6%)

Query: 316 AVSLLDRMV---ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           AVS  +RM    A +  PN  TYG +I      GR   G   L ++ ++ F V+   ++ 
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 373 LISGLFKEGKAEDAMKL-WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           L+ GL  + +  DAM +  ++M + GC PN   Y+ L+ GLC   +  EA E+L  M ++
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 432 G--CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           G  C  +  +Y++++ GFF+ G   KA   + +M     + N V YS +I  LC+   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  V T M+  G  P+   Y+S++HG C++G  +EA+    +M       +PDV TYN 
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH--SDGVEPDVVTYNS 309

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQDGTDFLNELA 607
           L++ LCK    + +  + +SM  RG  P++ T    L   A K  L       D +    
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 608 IR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           I               K+ +      +   M Q+ L+P T T+  V+  LC+  R++ A+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 214/441 (48%), Gaps = 12/441 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ S++  Y +SG  K     L +M     E  VV   S +      G+     EA ++F
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC---TEARKMF 327

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIK 200
            +M      KR +K   +    ++Q      AL   + +++    N I PN   F+++I 
Sbjct: 328 DSMT-----KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              + G VD A+ +F +M  +   PD  TY T++  LCK  R+++A+   ++M  +   P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             + +N LI+ LC   +  +A +L+  M  +G   + + +N++I   C +G + ++  L 
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D MV     P+ +TY T+I+G    G+  +  ++L SM       +   Y+TLI+G  K 
Sbjct: 503 DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI 562

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            + EDA+ L+++M   G  P+ + Y+ ++ GL +  +   A+E+   +  +G      TY
Sbjct: 563 SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTY 622

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  ++    +A+ +++++   +       ++++I  L + G+  EA+ ++  + +
Sbjct: 623 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682

Query: 501 RGCKPDVVAYSSMIHGLCNAG 521
            G  PDV  YS M   L   G
Sbjct: 683 NGLVPDVRTYSLMAENLIEQG 703


>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
           [Vitis vinifera]
 gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
          Length = 503

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 146/451 (32%), Positives = 246/451 (54%), Gaps = 18/451 (3%)

Query: 69  IFNSTPK--LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK 126
           IF+S        ++    TF  +I    ++  F+  E +L RM+ EK  + E  F+ I +
Sbjct: 34  IFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICR 93

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           AYG+ H   +A+R+F  M  E+ C+ + KS+ +V  +++ E     AL FY ++   + M
Sbjct: 94  AYGRVHKPLDAVRVFRKM-KEYECEPSQKSYITVFAILVGENQLKLALRFYRYM---REM 149

Query: 187 NILPNTLTFNLVIKTVCR-LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
            I P+  + N++IK +C+  G +D A+++FREMP R C PD YTY TL++GLC+  ++ E
Sbjct: 150 GIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGE 209

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  L  EM+   C PT VT+  LI+GLC++ +L  A +L++ M  KG  PN  TY++L+ 
Sbjct: 210 AKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMD 269

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C  G   +A+ LLD MV+ + +PN +TY T+++GL K G+  +   +L  M+ +    
Sbjct: 270 GHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRP 329

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS-------ALIDGLCRVGKP 418
           +  +Y  +ISG     K  +A     +M+  G  PN + +S        ++ GLC    P
Sbjct: 330 DAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLC-TEHP 388

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           + A ++   M   G + +A T+ SL+  F   G  HKA  +  +M  + C+ +EV ++ +
Sbjct: 389 NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAV 448

Query: 479 IHGLCEDGKLRE-ARMVWTQML--SRGCKPD 506
           +    +  K+RE A +V  +++   R   PD
Sbjct: 449 VCAFWDRRKVRESAELVQVELMVEHRKMGPD 479



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 180/404 (44%), Gaps = 40/404 (9%)

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           T+  ++  L   N    A  LL  M+ + C  T   F  +     +  +   A ++   M
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKM 111

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
               C P++ +Y T+   L  +  L  A+     M      P+  +   +I  L K    
Sbjct: 112 KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGT 171

Query: 349 VDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           +D A R+   M  R    + Y Y TLI+GL + GK  +A +L+K+M  K C P  V Y++
Sbjct: 172 MDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTS 231

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI GLC+    D A  +L EM + G   N FTYSSLM G  +SG   +A+E+   M    
Sbjct: 232 LIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            + N + YS L+HGLC++GKL+EA  +  +M  +G +PD   Y  +I G C+     EA 
Sbjct: 292 HLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAA 351

Query: 528 KLFNEM-------------------------LCLEPKSQP--------------DVFTYN 548
              +EM                         LC E  ++               D  T++
Sbjct: 352 NFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFD 411

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            L+N  C + ++  +  L++ M+  GC PD VT N  + A  ++
Sbjct: 412 SLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDR 455


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 133/403 (33%), Positives = 226/403 (56%), Gaps = 5/403 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T + ++   C    + +A+ L  +M     +PD +T+ TL+ GL   N+  EAV L
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           +D+M   GC P  VT+  ++NGLCK G++  A  L++ M       N V +NT+I  LC 
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             +++ AV L   M      PN VTY ++IN L   GR  D +R+L +M E+K + N   
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ LI   FKEGK  +A KL ++M+++   P+T+ Y+ LI+G C   + DEA+++   M+
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +  C  N  TY++L+ GF +  +    VE++++M++   V N V Y+ +I G  + G   
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A+MV+ QM+S     D++ YS ++HGLC+ G ++ AL +F  +   + + + ++F YN 
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL--QKSEMELNIFIYNT 508

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           ++  +CK   +  + DL  S+      PD+VT N  ++ L  K
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSK 548



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/468 (30%), Positives = 236/468 (50%), Gaps = 9/468 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y  +  + +A+ L   MV E   K    +F ++++ +    L+++A E    +   
Sbjct: 159 LLNGYCHSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLF---LHNKASEAVALVDQM 214

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P+ +T+  V+  +C+ G +D A+ L  +M     + ++  + T++D LCK   +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           + AV L  EM+  G  P  VT+N LIN LC  G    A++L+ NM  K   PN VT+N L
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I     +G L +A  L + M+     P+ +TY  +ING     R  +  ++   M  +  
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   Y+TLI+G  K  + ED ++L+++M ++G   NTV Y+ +I G  + G  D A+ 
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  +M++N    +  TYS L+ G    GK   A+ I+K + K+    N   Y+ +I G+C
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK+ EA   W    S   KPDVV Y++MI GLC+   ++EA  LF +M   E  + P+
Sbjct: 515 KAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM--KEDGTLPN 569

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
             TYN L+ A  +  + + S +L+  M   G   D  T ++    L +
Sbjct: 570 SGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD 617



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/417 (29%), Positives = 221/417 (52%), Gaps = 5/417 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ +  +V ++     P+ + FN ++  V ++   +  I L  +M       D+YTY  
Sbjct: 67  AVDLFGDMVKSRP---FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
            ++  C+ ++L  A+ +L +M   G  P  VT + L+NG C +  +  A  LVD M   G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+  T+ TLIHGL L     +AV+L+D+MV   C P+ VTYGT++NGL K G      
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  ME  +   N  I++T+I  L K    E A+ L+ +M  KG +PN V Y++LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+  +A  +L  M+      N  T+++L+  FF+ GK  +A ++ ++M + +   + 
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           + Y++LI+G C   +L EA+ ++  M+S+ C P++  Y+++I+G C    VE+ ++LF E
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           M   +     +  TY  ++    +  +   +  +   M+      D++T +I L  L
Sbjct: 424 M--SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 189/377 (50%), Gaps = 8/377 (2%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           VD+A+ LF +M      P I  +  L+  + K N+ +  + L ++MQ  G      T+++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
            IN  C+  +L  A  ++  M   G  P+ VT ++L++G C    +  AV+L+D+MV   
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+  T+ T+I+GL    +A +   ++  M +R    +   Y T+++GL K G  + A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L  +M     K N V+++ +ID LC+    + A ++  EM   G   N  TY+SL+   
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
              G+   A  +  +M +     N V ++ LI    ++GKL EA  +  +M+ R   PD 
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           + Y+ +I+G C    ++EA ++F  M+   CL     P++ TYN L+N  CK   +   +
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-----PNIQTYNTLINGFCKCKRVEDGV 418

Query: 565 DLLNSMMDRGCDPDLVT 581
           +L   M  RG   + VT
Sbjct: 419 ELFREMSQRGLVGNTVT 435



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 186/368 (50%), Gaps = 3/368 (0%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           ++D+AV L  +M     FP+ V FN L++ + K  +      L + M   G   +  TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
             I+  C +  L  A+++L +M+     P+ VT  +++NG     R  D   ++  M E 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            +  + + ++TLI GLF   KA +A+ L  QM+++GC+P+ V Y  +++GLC+ G  D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +L +M      AN   +++++    +      AV+++ +M       N V Y+ LI+ 
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC  G+  +A  + + ML +   P+VV ++++I      G + EA KL  EM  ++    
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM--IQRSID 360

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PD  TYN+L+N  C  + +  +  +   M+ + C P++ T N  +     K +  +DG +
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC-KCKRVEDGVE 419

Query: 602 FLNELAIR 609
              E++ R
Sbjct: 420 LFREMSQR 427



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 101/248 (40%), Gaps = 30/248 (12%)

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSS------LMKGFFESGKGHKAVEIWKDMAKNNC 468
           +G P       F +  +GC   +F  +S      L     +  K   AV+++ DM K+  
Sbjct: 21  IGNPPTVPS-FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRP 79

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + V ++ L+  + +  K      +  QM + G   D+  YS  I+  C    +  AL 
Sbjct: 80  FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +  +M+ L    +PD+ T + LLN  C    IS ++ L++ M++ G  PD  T    +  
Sbjct: 140 VLAKMMKL--GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
           L                     F   + S    +V+ M+Q+   P   T+  VV  LC+ 
Sbjct: 198 L---------------------FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 649 KRIQAAIN 656
             I  A+N
Sbjct: 237 GDIDLALN 244



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 43/232 (18%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++IQ +  +GD  S +MV  +M   +                               
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNR------------------------------- 463

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    + +++ +L+ +   G    AL  + ++  ++ M +  N   +N +I+ +C+
Sbjct: 464 -----VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE-MEL--NIFIYNTMIEGMCK 515

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A  LF  + ++   PD+ TY T++ GLC +  L EA  L  +M+ DG  P   T
Sbjct: 516 AGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           +N LI    ++ +   +A+L+  M   G + +  T  +L+  +   G LDK+
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKS 623


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 152/506 (30%), Positives = 253/506 (50%), Gaps = 37/506 (7%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI--- 180
           I +      L+ +A+ ++ TM  EF  K T+ ++N++L+   + G   + L+  + +   
Sbjct: 205 ILRILRDKDLMSKAVEVYRTM-GEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRR 263

Query: 181 ---VNAKHMNILPNTL--------------------------TFNLVIKTVCRLGLVDNA 211
               N    N+L N L                          T+N +I      G++  A
Sbjct: 264 GCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEA 323

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           + L  EM ++   P + TY + + GLCK  R+ +A+  L +M  +   P  V++N LI G
Sbjct: 324 LSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYG 383

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            C+ G L +A  L D +      P  VTYNTL+ GLC +G L+ A  L   M+     P+
Sbjct: 384 YCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPD 443

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY  ++NG  K+G           M      ++ Y Y+T I G  K G    A  L +
Sbjct: 444 IVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQE 503

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M+ KG  P+ ++Y+ ++DGLC++G  +EA E+L +M+++G   +  TY+S++    E+G
Sbjct: 504 EMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENG 563

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +  K  EI+ +M       + V Y+VLIHG    G+L  A + +++M  +G  P+V+ Y+
Sbjct: 564 RLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYN 623

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           S+I+GLC    +++A   F EM  +E    P+ ++Y IL+N  C   N   ++ L   M+
Sbjct: 624 SLINGLCKVRRMDQAYNFFAEM--VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQML 681

Query: 572 DRGCDPDLVTCNIFLTALKE--KLEA 595
           DRG  PD  T +  L  L +  KL+A
Sbjct: 682 DRGVQPDSCTHSALLKQLGKDCKLQA 707



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/504 (28%), Positives = 242/504 (48%), Gaps = 26/504 (5%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +VK  + ++ V  ++ +  + L  ++ ++ ++   + P+    N +++ +    L+  A+
Sbjct: 163 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSR---LSPDVKNCNRILRILRDKDLMSKAV 219

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +++R M     +P I TY TL+D  CK  ++ + + LL EMQ  GC P  VT+NVLINGL
Sbjct: 220 EVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 279

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            K GE  +A  L+  M   G   +  TYN LI+G   KG L +A+SL + MV     P  
Sbjct: 280 SKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTV 339

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            TY + I GL KLGR  D  + L  M       +   Y+TLI G  + G    A  L+ +
Sbjct: 340 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDE 399

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           +      P  V Y+ L+DGLCR G+ + A+++  EMIN G A +  TY+ L+ G  + G 
Sbjct: 400 LRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGS 459

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A E + +M       +   Y+  I G  + G    A  +  +ML++G  PD++ Y+ 
Sbjct: 460 LSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNV 519

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           ++ GLC  G++EEA +L  +M  +     PD  TY  +++A  +   +    ++   M+ 
Sbjct: 520 VVDGLCKLGNLEEASELLQKM--VSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLS 577

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
           +G  P +VT  + +     K                      R    F     M +K + 
Sbjct: 578 KGLTPSVVTYTVLIHGHAGK---------------------GRLERAFIYFSEMQEKGIL 616

Query: 633 PQTSTWERVVQELCRPKRIQAAIN 656
           P   T+  ++  LC+ +R+  A N
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYN 640



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 213/447 (47%), Gaps = 39/447 (8%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D T+  LI   +  G+F+  + ++  M +    V   ++  +   Y    ++ EA+ L  
Sbjct: 269 DVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQE 328

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV +     TV ++NS +  + + G    A++    + +    N+LP+ +++N +I   
Sbjct: 329 EMVLK-GASPTVATYNSFIYGLCKLGRMSDAMQ---QLSDMLANNLLPDVVSYNTLIYGY 384

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CRLG +  A  LF E+      P I TY TL+DGLC++  L+ A  L  EM  +G  P  
Sbjct: 385 CRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDI 444

Query: 263 VTFNVLINGLCKNGEL-----------------------------------GRAAKLVDN 287
           VT+ +L+NG CK G L                                    RA  L + 
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  KG  P+ + YN ++ GLC  GNL++A  LL +MV+   +P+ VTY +II+  ++ GR
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
              G  +   M  +    +   Y+ LI G   +G+ E A   + +M EKG  PN + Y++
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI+GLC+V + D+A     EM+  G   N ++Y+ L+      G   +A+ ++K M    
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMV 494
              +   +S L+  L +D KL+  R +
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQAVRQL 711


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/482 (29%), Positives = 240/482 (49%), Gaps = 27/482 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++    +V+A+H   +P+  T  +V++++C    VD+A +L  EM  R    +  TY  
Sbjct: 58  AVQVLQEMVSARH---VPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSA 114

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+DGLCK  RLDEAV L++ M   GC PT VT+N +I G C+   +  A   ++ M  +G
Sbjct: 115 LVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEG 174

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C P+ +TY  LI G C   ++ + + LL  +      P+ VTY T+I+GL K GR  D  
Sbjct: 175 CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +    EE         Y++LI G  + G  ++A++L  +M++  C P+ V Y+ L+   
Sbjct: 235 DIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C++G+ D+A E+  +M+ N  + +  T++SL+ G    G+   A+E+ +++ +  C    
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y+ ++ G C+  ++R+A  +     SRG  P+ V Y+ ++ G C AG  ++AL+  ++
Sbjct: 352 YTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 411

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +          V  Y I+L+ALC+      ++     M+ RG  P   T    + AL  K
Sbjct: 412 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALC-K 470

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
              PQ   + L E                    M++   +P   T + VV   CR   IQ
Sbjct: 471 AHQPQQAHELLEE--------------------MIKYGHTPGPGTCDAVVSAYCRAGMIQ 510

Query: 653 AA 654
            A
Sbjct: 511 KA 512



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 154/483 (31%), Positives = 243/483 (50%), Gaps = 26/483 (5%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P TL  N+VI  +CR G + +A+ ++R+M   +  PD  TY  L+ GL K  RL +AV +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L EM      P   T  V++  LC    +  A +LV+ M  +G   N +TY+ L+ GLC 
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEY 368
              LD+AV+L++ M    C P  VTY +II G  +  R VD A   M  M     H +  
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCR-ARRVDEAHGFMEQMVAEGCHPDII 180

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ LI G  K       ++L  ++  +G  P+ V YS +IDGLC+ G+  +A +I  EM
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
               CA  A TY+SL+ G+  +G   +A+ +   M  + C  + V Y+ L+   C+ G+L
Sbjct: 241 ---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A  ++ QM++    PDVV ++S++ GLC  G +E+AL+L  E+        P ++TYN
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI--TRRGCPPTIYTYN 355

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL-- 606
            +++  CK + +  + +L+     RG  P+ VT NI +          Q    +L++L  
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ-ALQYLDQLNS 414

Query: 607 ------------AI---RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                       AI    L +  RT    +  E M+Q+   P  +T+  VV  LC+  + 
Sbjct: 415 EGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQP 474

Query: 652 QAA 654
           Q A
Sbjct: 475 QQA 477



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 239/486 (49%), Gaps = 42/486 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE-GLYHRALEFYN 178
           ++  +     KA  + +A+++   MV   H        N+ L V++Q   L  R  +   
Sbjct: 41  TYTKLVHGLSKARRLRDAVQVLQEMVSARHVPD-----NTTLTVVVQSLCLGDRVDDARE 95

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +    H  +  N +T++ ++  +C+   +D A+ L   M  R C P + TY +++ G C
Sbjct: 96  LVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFC 155

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG------ 292
           +  R+DEA   +++M  +GC P  +T+  LI G CK+ ++GR  +L+  +  +G      
Sbjct: 156 RARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIV 215

Query: 293 --------------------------CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
                                     C P  +TYN+LI G C  G++D+A+ LL +MV  
Sbjct: 216 TYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDD 275

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
           KC P+ VTY T+++   K+GR  D   +   M   K   +   +++L+ GL  EG+ EDA
Sbjct: 276 KCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 335

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           ++L +++  +GC P    Y+ ++DG C+  +  +AEE++ +  + G   N  TY+ L+ G
Sbjct: 336 LELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAG 395

Query: 447 FFESGKGHKAVEIWKDMAKNN--CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
              +G+  +A++    +      C  +   Y++++  LC DG+  +A   + +M+ RG  
Sbjct: 396 CCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYV 455

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P    +++++  LC A   ++A +L  EM  ++    P   T + +++A C+   I  + 
Sbjct: 456 PAAATFATVVFALCKAHQPQQAHELLEEM--IKYGHTPGPGTCDAVVSAYCRAGMIQKAD 513

Query: 565 DLLNSM 570
           +L + +
Sbjct: 514 ELASEL 519



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 175/361 (48%), Gaps = 27/361 (7%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P  + +N +I GLC  G L  A+ +  +M  +   P+ +TY  +++GL K  R  D  +V
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M   +   +    + ++  L    + +DA +L ++M+ +G   N + YSAL+DGLC+
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
             + DEA  ++  M   GCA    TY+S++ GF  + +  +A    + M    C  + + 
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ LI G C+   +     +  ++  RG  PD+V YS++I GLC AG + +A+ +F EM 
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
           C      P   TYN L+   C+  ++  +I LL  M+D  C PD+VT    ++A      
Sbjct: 242 C-----APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSA------ 290

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                            K  R    +++ + M+   LSP   T+  +V  LC   R++ A
Sbjct: 291 ---------------FCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDA 335

Query: 655 I 655
           +
Sbjct: 336 L 336



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 147/346 (42%), Gaps = 76/346 (21%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI  Y  +GD                                   ++EAIRL   M
Sbjct: 248 TYNSLIGGYCRAGD-----------------------------------MDEAIRLLGKM 272

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           VD+  C   V ++ ++++   + G    A E +  +V  K   + P+ +TF  ++  +C 
Sbjct: 273 VDD-KCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANK---LSPDVVTFTSLVDGLCG 328

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +++A++L  E+  R C P IYTY  ++DG CK N++ +A  L+ + +  G  P  VT
Sbjct: 329 EGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVT 388

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +N+L+ G C+ G   +A + +D +  +G  C  +   Y  ++  LC  G  D AV   + 
Sbjct: 389 YNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 448

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+    +P   T+ T++  L                                    K  +
Sbjct: 449 MIQRGYVPAAATFATVVFALC-----------------------------------KAHQ 473

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            + A +L ++M++ G  P      A++   CR G   +A+E+  E+
Sbjct: 474 PQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 166/639 (25%), Positives = 297/639 (46%), Gaps = 72/639 (11%)

Query: 39  FSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFY--SLIQHYANS 96
            S   A S   ++  +P   +++E+P         P  GS   GDS  +  + ++  A +
Sbjct: 19  LSTAPATSHRNKIPADP---SRTERP--------RPDPGS---GDSARHHEATVRRLAAA 64

Query: 97  GDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKS 156
           GD   ++  L  MR       E + +    A+ +A   + A++ F+   D       V+ 
Sbjct: 65  GDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRV 124

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N +L+ +++E +    +  Y+   N +   + PN  T+NL+I+ +C+   VD A ++  
Sbjct: 125 YNHLLDALLRENMVGAVVPVYD---NMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLD 181

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL-------------------------- 250
           EM  + C PD  ++ T++ G+CK  R++EA   L                          
Sbjct: 182 EMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEV 241

Query: 251 ----DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
               +EM   G  P  VT+  +++  CK  EL  A  ++  M   GC PN +T+  L+ G
Sbjct: 242 FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKG 301

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
               G +  A+S+   MV     P+ ++Y  +I GL  +G          SM+      N
Sbjct: 302 FFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPN 361

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              YSTL+ G    G  + AM +W +M   GCKPN VVY+ +ID LC+    D+AE ++ 
Sbjct: 362 ATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLID 421

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +M+ + C  N  T+++L+    + G+  +A+ ++  M +N C  N+  Y+ L+HGL  +G
Sbjct: 422 KMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREG 481

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
             ++A  +  +ML+ G +  +V Y+++I+ LC     + A+ L   M+      QPD FT
Sbjct: 482 NHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV--QGIQPDAFT 539

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           +N +++A CK+  +S +  LL  M    C  ++V   I ++ L  + +        L+  
Sbjct: 540 FNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGK--------LSNA 591

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            + L K             ML + + P  +TW  +V+ +
Sbjct: 592 MVYLLK-------------MLYEGICPNEATWNVLVRAI 617



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 224/487 (45%), Gaps = 54/487 (11%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           I    R G  D A++ F       C +P +  Y  L+D L +EN +   V + D M+  G
Sbjct: 93  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 152

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA- 316
             P   T+N+LI  LC+N  +  A K++D M  KGC P+EV++ T++ G+C  G +++A 
Sbjct: 153 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 212

Query: 317 -----------------------------VSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                                         S+++ MV     PN VTY TI++   K   
Sbjct: 213 GFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARE 272

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                 +L  M       N   ++ L+ G F++GK  DA+ +W  M+++G  P+T+ Y+ 
Sbjct: 273 LRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNV 332

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI GLC +G    A +    M  N    NA TYS+L+ GF  +G    A+ IW +M  + 
Sbjct: 333 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 392

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  N V Y+ +I  LC+     +A  +  +ML   C P+ V ++++I  LC+ G V  AL
Sbjct: 393 CKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRAL 452

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            +F+ M        P+  TYN LL+ L ++ N   +  ++  M++ G +  LVT N  + 
Sbjct: 453 NVFHGM--RRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVIN 510

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            L +           + + A+ L  R            M+ + + P   T+  ++   C+
Sbjct: 511 CLCQMC---------MRKHAMLLLGR------------MMVQGIQPDAFTFNAIIHAYCK 549

Query: 648 PKRIQAA 654
             ++  A
Sbjct: 550 EGKVSIA 556



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 191/402 (47%), Gaps = 23/402 (5%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA---------------- 183
           + H +  EF   R  + F SV+N ++Q GL    +  Y  IV+A                
Sbjct: 228 VVHALCGEF---RMWEVF-SVVNEMVQRGLQPNVVT-YTTIVDAFCKARELRMACAILAR 282

Query: 184 -KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
              M   PN LTF  ++K     G V +A+ ++  M      P   +Y  L+ GLC    
Sbjct: 283 MVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGD 342

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L  A+   + M+ +   P   T++ L++G    G+L  A  + + M   GC PN V Y  
Sbjct: 343 LKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 402

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I  LC K   D+A SL+D+M+   C PN VT+ T+I  L   GR      V   M    
Sbjct: 403 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
            H N+  Y+ L+ GLF+EG  +DA  +  +M+  G + + V Y+ +I+ LC++     A 
Sbjct: 463 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 522

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +L  M+  G   +AFT+++++  + + GK   A  +   M   NC  N V Y++LI  L
Sbjct: 523 LLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 582

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL-CNAGSV 523
           C  GKL  A +   +ML  G  P+   ++ ++  +  N G++
Sbjct: 583 CNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTI 624



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/422 (25%), Positives = 182/422 (43%), Gaps = 31/422 (7%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-P 295
           L     +D     L EM++ G   T       I    + G   RA K        GC  P
Sbjct: 61  LAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDP 120

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
               YN L+  L  +  +   V + D M  +   PN  TY  +I  L +  R VD AR +
Sbjct: 121 GVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDR-VDAARKM 179

Query: 356 MS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           +  M  +  H +E  + T++SG+ K G+ E+A     + +     P    Y+A++  LC 
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALCG 234

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
             +  E   ++ EM+  G   N  TY++++  F ++ +   A  I   M    C  N + 
Sbjct: 235 EFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLT 294

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           ++ L+ G  EDGK+ +A  +W  M+  G  P  ++Y+ +I GLC  G ++ AL  FN M 
Sbjct: 295 FTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK 354

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
                  P+  TY+ L++      ++  ++ + N M   GC P++V     +  L +K+ 
Sbjct: 355 --RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM- 411

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                          +F +  +     +++ ML     P T T+  ++  LC   R+  A
Sbjct: 412 ---------------MFDQAES-----LIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRA 451

Query: 655 IN 656
           +N
Sbjct: 452 LN 453



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 147/311 (47%), Gaps = 4/311 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++  LI+     GD K        M+R   +    ++  +   +  A  ++ A+ +++ M
Sbjct: 329 SYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 388

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                CK  V  + ++++V+ ++ ++ +A    + ++     N  PNT+TFN +I  +C 
Sbjct: 389 KSS-GCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD---NCPPNTVTFNTLIGRLCD 444

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A+ +F  M    C P+  TY  L+ GL +E    +A  ++ EM  +G   + VT
Sbjct: 445 CGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVT 504

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N +IN LC+      A  L+  M ++G  P+  T+N +IH  C +G +  A  LL +M 
Sbjct: 505 YNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMN 564

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A  C  N V Y  +I+ L   G+  +    L+ M       NE  ++ L+  +F      
Sbjct: 565 AVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTI 624

Query: 385 DAMKLWKQMME 395
             + L+K ++E
Sbjct: 625 GPIHLFKYIVE 635


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 271/529 (51%), Gaps = 28/529 (5%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++AI LF  M+        V  F+   + I +   ++  L+F   +   +   I  N  T
Sbjct: 60  DDAIALFQEMIRSRPLPSLV-DFSRFFSAIARTKQFNLVLDFCKQL---ELNGIAHNIYT 115

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N++I   CR      A  +  ++     EPD  T+ TL+ GL  E ++ EAV+L+D M 
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +GC P  VT+N ++NG+C++G+   A  L+  M  +    +  TY+T+I  LC  G +D
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A+SL   M       + VTY +++ GL K G+  DGA +L  M  R+   N   ++ L+
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 295

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
               KEGK ++A +L+K+M+ +G  PN + Y+ L+DG C   +  EA  +L  M+ N C+
Sbjct: 296 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 355

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  T++SL+KG+    +    ++++++++K   V N V YS+L+ G C+ GK++ A  +
Sbjct: 356 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 415

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD--VFTYNILLN 552
           + +M+S G  PDV+ Y  ++ GLC+ G +E+AL++F ++     KS+ D  +  Y  ++ 
Sbjct: 416 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL----QKSKMDLGIVMYTTIIE 471

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVT----------------CNIFLTALKEKLEAP 596
            +CK   +  + +L  S+  +G  P+++T                 NI L  ++E   AP
Sbjct: 472 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 531

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            D T   N L     +    +   K++E M     S   S+ + V+  L
Sbjct: 532 NDCT--YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578



 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 237/439 (53%), Gaps = 9/439 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN+++  +  EG    A+   + +V        P+ +T+N ++  +CR G    A+ L 
Sbjct: 150 TFNTLIKGLFLEGKVSEAVVLVDRMV---ENGCQPDVVTYNSIVNGICRSGDTSLALDLL 206

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R+M  RN + D++TY T++D LC++  +D A+ L  EM+  G   + VT+N L+ GLCK 
Sbjct: 207 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 266

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+    A L+ +M  +  +PN +T+N L+     +G L +A  L   M+     PN +TY
Sbjct: 267 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 326

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G     R  +   +L  M   K   +   +++LI G     + +D MK+++ + +
Sbjct: 327 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 386

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +G   N V YS L+ G C+ GK   AEE+  EM+++G   +  TY  L+ G  ++GK  K
Sbjct: 387 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 446

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+EI++D+ K+      V Y+ +I G+C+ GK+ +A  ++  +  +G KP+V+ Y+ MI 
Sbjct: 447 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 506

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  GS+ EA  L  +M   E  + P+  TYN L+ A  +  +++ S  L+  M   G 
Sbjct: 507 GLCKKGSLSEANILLRKM--EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 564

Query: 576 DPDL----VTCNIFLTALK 590
             D     +  ++ L+A+K
Sbjct: 565 SADASSIKMVIDMLLSAMK 583



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 162/342 (47%), Gaps = 23/342 (6%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A++L   M+ S+ +P+ V +    + + +  +          +E      N Y  + +
Sbjct: 60  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 119

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+   +  K   A  +  ++M+ G +P+T  ++ LI GL   GK  EA  ++  M+ NGC
Sbjct: 120 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 179

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY+S++ G   SG    A+++ + M + N   +   YS +I  LC DG +  A  
Sbjct: 180 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 239

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M ++G K  VV Y+S++ GLC AG   +   L  +M+  E    P+V T+N+LL+ 
Sbjct: 240 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI--VPNVITFNVLLDV 297

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
             K+  +  + +L   M+ RG  P+++T N  +           DG    N         
Sbjct: 298 FVKEGKLQEANELYKEMITRGISPNIITYNTLM-----------DGYCMQN--------- 337

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            R S    ++++M++   SP   T+  +++  C  KR+   +
Sbjct: 338 -RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 18/290 (6%)

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K +DA+ L+++M+     P+ V +S     + R  + +   +   ++  NG A N +T +
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            ++  F    K   A  +   + K     +   ++ LI GL  +GK+ EA ++  +M+  
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC+PDVV Y+S+++G+C +G    AL L  +M   E   + DVFTY+ ++++LC+   I 
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKM--EERNVKADVFTYSTIIDSLCRDGCID 235

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------ 609
            +I L   M  +G    +VT N  +  L  K     DG   L ++  R            
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGALLLKDMVSREIVPNVITFNVL 294

Query: 610 ---LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                K  +     ++ + M+ + +SP   T+  ++   C   R+  A N
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 344



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/413 (19%), Positives = 170/413 (41%), Gaps = 44/413 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L+Q +  SG  K  E +   M     +    ++  +         +E+A+ +F  +
Sbjct: 395 TYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 454

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYH--RALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
                 +++      V+   I EG+    +  + +N   +     + PN +T+ ++I  +
Sbjct: 455 ------QKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 508

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ G +  A  L R+M      P+  TY TL+    ++  L  +  L++EM+  G     
Sbjct: 509 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADA 568

Query: 263 VTFNVLINGLCKNGE-------LGRAAKLVDNM---------------FLKGCLPNEVTY 300
            +  ++I+ L    +       L + +K   ++               F+K    N +T 
Sbjct: 569 SSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITT 628

Query: 301 NTLIHGLCLKG----NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
           +  ++ +  +G     L++ +  L R    K   N      + N L+  G       +++
Sbjct: 629 SLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAECDLMV 688

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGK---AEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
            +E      +   Y+     + + G+      A +L K+M+++G  PNT+ YS+LIDG C
Sbjct: 689 DLE---LPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFC 745

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           +  + DEA ++L  M+  G +   +    L+ G     +     E W+++  +
Sbjct: 746 KENRLDEANQMLDLMVTKGDSDIRY----LLAGLMRKKRKGSETEGWENLPDD 794


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 259/509 (50%), Gaps = 23/509 (4%)

Query: 164 IIQEGLYHRALE----FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           I++ GL+   L+     +  +V ++    LP+ + FN ++  + ++   D  I L  +M 
Sbjct: 18  ILRNGLHDMKLDDAIGLFGGMVKSRP---LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                  +YTY  L++  C+ +++  A+ LL +M   G  P+ VT + L+NG C    + 
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  LVD M   G  P+ +T+ TLIHGL L     +AV+L+DRMV   C PN VTYG ++
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           NGL K G       +L  ME  K   +  I++T+I  L K    +DA+ L+K+M  KG +
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN V YS+LI  LC  G+  +A ++L +MI      N  T+++L+  F + GK  +A ++
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           + DM K +   +   Y+ L++G C   +L +A+ ++  M+S+ C PDVV Y+++I G C 
Sbjct: 315 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 374

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           +  VE+  +LF EM         D  TY  L+  L    +  ++  +   M+  G  PD+
Sbjct: 375 SKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 432

Query: 580 VTCNIFLTAL--KEKLEAPQDGTDFLNELAIRL------------FKRQRTSGGFKIVEV 625
           +T +I L  L    KLE   +  D++ +  I+L             K  +   G+ +   
Sbjct: 433 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 492

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  K + P   T+  ++  LC  + +Q A
Sbjct: 493 LSLKGVKPNVVTYNTMISGLCSKRLLQEA 521



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 258/523 (49%), Gaps = 72/523 (13%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++AI LF  MV        V+ FN +L+ I +   +   +     +   + + I+    
Sbjct: 28  LDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFDVVISLGEKM---QRLEIVHGLY 83

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N++I   CR   +  A+ L  +M     EP I T  +L++G C   R+ +AV L+D+M
Sbjct: 84  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  +TF  LI+GL  + +   A  LVD M  +GC PN VTY  +++GLC +G+ 
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203

Query: 314 DKAVSLLDRMVASKC-----------------------------------MPNEVTYGTI 338
           D A++LL++M A+K                                     PN VTY ++
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+ L   GR  D +++L  M E+K + N   ++ LI    KEGK  +A KL+  M+++  
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+   Y++L++G C   + D+A+++   M++  C  +  TY++L+KGF +S +     E
Sbjct: 324 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 383

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++++M+    V + V Y+ LI GL  DG    A+ V+ QM+S G  PD++ YS ++ GLC
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443

Query: 519 NAGSVEEALKLFNEM------------------LCLEPKS---------------QPDVF 545
           N G +E+AL++F+ M                  +C   K                +P+V 
Sbjct: 444 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 503

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           TYN +++ LC +  +  +  LL  M + G  P+  T N  + A
Sbjct: 504 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 546



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 209/398 (52%), Gaps = 4/398 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ L   MV +  C+  + ++  V+N + + G    AL   N +  AK   I  + + F
Sbjct: 170 EAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK---IEADVVIF 225

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N +I ++C+   VD+A+ LF+EM  +   P++ TY +L+  LC   R  +A  LL +M  
Sbjct: 226 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 285

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
               P  VTFN LI+   K G+   A KL D+M  +   P+  TYN+L++G C+   LDK
Sbjct: 286 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 345

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  + + MV+  C P+ VTY T+I G  K  R  DG  +   M  R    +   Y+TLI 
Sbjct: 346 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 405

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GLF +G  ++A K++KQM+  G  P+ + YS L+DGLC  GK ++A E+   M  +    
Sbjct: 406 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 465

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           + + Y+++++G  ++GK     +++  ++      N V Y+ +I GLC    L+EA  + 
Sbjct: 466 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 525

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +M   G  P+   Y+++I      G    + +L  EM
Sbjct: 526 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 563



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 205/429 (47%), Gaps = 18/429 (4%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +LD+A+ L   M      P+ V FN L++ + K  +      L + M     +    TYN
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI+  C +  +  A++LL +M+     P+ VT  +++NG     R  D   ++  M E 
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            +  +   ++TLI GLF   KA +A+ L  +M+++GC+PN V Y  +++GLC+ G  D A
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +L +M      A+   +++++    +      A+ ++K+M       N V YS LI  
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC  G+  +A  + + M+ +   P++V ++++I      G   EA KL+++M  ++    
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM--IKRSID 324

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PD+FTYN L+N  C    +  +  +   M+ + C PD+VT N  +     K +  +DGT+
Sbjct: 325 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC-KSKRVEDGTE 383

Query: 602 FLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              E++ R               LF         K+ + M+   + P   T+  ++  LC
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443

Query: 647 RPKRIQAAI 655
              +++ A+
Sbjct: 444 NNGKLEKAL 452



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 9/302 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF +LI  +   G F   E +   M   KR +    F +  +   +     +++A ++F 
Sbjct: 294 TFNALIDAFVKEGKFVEAEKLYDDMI--KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 351

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV +  C   V ++N+++    +        E +  +    H  ++ +T+T+  +I+ +
Sbjct: 352 FMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREM---SHRGLVGDTVTYTTLIQGL 407

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
              G  DNA ++F++M      PDI TY  L+DGLC   +L++A+ + D MQ        
Sbjct: 408 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 467

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             +  +I G+CK G++     L  ++ LKG  PN VTYNT+I GLC K  L +A +LL +
Sbjct: 468 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 527

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M     +PN  TY T+I   ++ G     A ++  M   +F V +     L++ +  +G+
Sbjct: 528 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVANMLHDGR 586

Query: 383 AE 384
            +
Sbjct: 587 LD 588



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 17/194 (8%)

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +L +GL  D KL +A  ++  M+     P +V ++ ++  +      +  + L  +M  L
Sbjct: 18  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLE 594
           E      ++TYNIL+N  C++S IS ++ LL  MM  G +P +VT +  L      +++ 
Sbjct: 77  EIVHG--LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 595 APQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                 D + E+  R            LF   + S    +V+ M+Q+   P   T+  VV
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 643 QELCRPKRIQAAIN 656
             LC+      A+N
Sbjct: 195 NGLCKRGDTDLALN 208


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 254/490 (51%), Gaps = 6/490 (1%)

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCKRTVKSFNS 159
           ++++VL RM +   +    S+  + K     +  +EA+ L   M D+   C   V S+ +
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           V+N   +EG   +A   Y+ +++     ILPN +T++ +I  +C+   +D A+++   M 
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDR---GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                P+  TY +++ G C   +  EA+  L +M  DG  P  VT+N L++ LCKNG   
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A K+ D+M  +G  P   TY TL+ G   KG L +   LLD MV +   PN   +  +I
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
               K G+      V   M ++  + +   Y T+I  L K G+ EDAM+ ++QM+++   
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P  +VY++LI  LC   K D+A+E++ EM++ G   +   ++S++    + G+  ++ ++
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           +  M +     + + YS LI G C  GK+ EA  +   M+S G KPD V Y+++I+G C 
Sbjct: 502 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
              +E+AL LF EM        PD+ TYNI+L  L +    + + +L   + + G   +L
Sbjct: 562 ISRMEDALVLFREM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 580 VTCNIFLTAL 589
            T NI L  L
Sbjct: 620 STYNIILHGL 629



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 233/486 (47%), Gaps = 28/486 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  YN +  A    + PN  T+ ++I + C  G +D        +  +    D   +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 233 LMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           L+ GLC + R  +A+ ++L  M   GC P   ++N+L+ GLC       A +L+  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 292 G--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
           G  C P+ V+Y T+I+G   +G+LDKA      M+    +PN VTY +II  L K  +A+
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK-AQAM 250

Query: 350 DGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
           D A  VL SM +     N   Y++++ G    G+ ++A+   K+M   G +P+ V Y++L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           +D LC+ G+  EA ++   M   G      TY +L++G+   G   +   +   M +N  
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N   +S+LI    + GK+ +A +V+++M  +G  PD V Y ++I  LC +G VE+A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            F +M  ++ +  P    YN L+++LC       + +L+  M+DRG   D +        
Sbjct: 431 YFEQM--IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-------- 480

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                        F N +     K  R     K+ ++M++  + P   T+  ++   C  
Sbjct: 481 -------------FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527

Query: 649 KRIQAA 654
            ++  A
Sbjct: 528 GKMDEA 533



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 173/360 (48%), Gaps = 22/360 (6%)

Query: 316 AVSLLDRMV---ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           AVS  +RM    A +  PN  TYG +I      GR   G   L ++ ++ F V+   ++ 
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTP 131

Query: 373 LISGLFKEGKAEDAMKL-WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           L+ GL  + +  DAM +  ++M + GC PN   Y+ L+ GLC   +  EA E+L  M ++
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 432 G--CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           G  C  +  +Y++++ GFF+ G   KA   + +M     + N V YS +I  LC+   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  V T M+  G  P+   Y+S++HG C++G  +EA+    +M       +PDV TYN 
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMH--SDGVEPDVVTYNS 309

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQDGTDFLNELA 607
           L++ LCK    + +  + +SM  RG  P++ T    L   A K  L       D +    
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 608 IR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           I               K+ +      +   M Q+ L+P T T+  V+  LC+  R++ A+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 214/441 (48%), Gaps = 12/441 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ S++  Y +SG  K     L +M     E  VV   S +      G+     EA ++F
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC---TEARKMF 327

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIK 200
            +M      KR +K   +    ++Q      AL   + +++    N I PN   F+++I 
Sbjct: 328 DSMT-----KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              + G VD A+ +F +M  +   PD  TY T++  LCK  R+++A+   ++M  +   P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             + +N LI+ LC   +  +A +L+  M  +G   + + +N++I   C +G + ++  L 
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D MV     P+ +TY T+I+G    G+  +  ++L SM       +   Y+TLI+G  K 
Sbjct: 503 DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI 562

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            + EDA+ L+++M   G  P+ + Y+ ++ GL +  +   A+E+   +  +G      TY
Sbjct: 563 SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTY 622

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  ++    +A+ +++++   +       ++++I  L + G+  EA+ ++  + +
Sbjct: 623 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682

Query: 501 RGCKPDVVAYSSMIHGLCNAG 521
            G  PDV  YS M   L   G
Sbjct: 683 NGLVPDVRTYSLMAENLIEQG 703


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  249 bits (635), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 271/529 (51%), Gaps = 28/529 (5%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++AI LF  M+        V  F+   + I +   ++  L+F   +   +   I  N  T
Sbjct: 70  DDAIALFQEMIRSRPLPSLV-DFSRFFSAIARTKQFNLVLDFCKQL---ELNGIAHNIYT 125

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N++I   CR      A  +  ++     EPD  T+ TL+ GL  E ++ EAV+L+D M 
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +GC P  VT+N ++NG+C++G+   A  L+  M  +    +  TY+T+I  LC  G +D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A+SL   M       + VTY +++ GL K G+  DGA +L  M  R+   N   ++ L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
               KEGK ++A +L+K+M+ +G  PN + Y+ L+DG C   +  EA  +L  M+ N C+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  T++SL+KG+    +    ++++++++K   V N V YS+L+ G C+ GK++ A  +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD--VFTYNILLN 552
           + +M+S G  PDV+ Y  ++ GLC+ G +E+AL++F ++     KS+ D  +  Y  ++ 
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL----QKSKMDLGIVMYTTIIE 481

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVT----------------CNIFLTALKEKLEAP 596
            +CK   +  + +L  S+  +G  P+++T                 NI L  ++E   AP
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            D T   N L     +    +   K++E M     S   S+ + V+  L
Sbjct: 542 NDCT--YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/439 (30%), Positives = 237/439 (53%), Gaps = 9/439 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN+++  +  EG    A+   + +V        P+ +T+N ++  +CR G    A+ L 
Sbjct: 160 TFNTLIKGLFLEGKVSEAVVLVDRMVEN---GCQPDVVTYNSIVNGICRSGDTSLALDLL 216

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R+M  RN + D++TY T++D LC++  +D A+ L  EM+  G   + VT+N L+ GLCK 
Sbjct: 217 RKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKA 276

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+    A L+ +M  +  +PN +T+N L+     +G L +A  L   M+     PN +TY
Sbjct: 277 GKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITY 336

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G     R  +   +L  M   K   +   +++LI G     + +D MK+++ + +
Sbjct: 337 NTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISK 396

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +G   N V YS L+ G C+ GK   AEE+  EM+++G   +  TY  L+ G  ++GK  K
Sbjct: 397 RGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEK 456

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+EI++D+ K+      V Y+ +I G+C+ GK+ +A  ++  +  +G KP+V+ Y+ MI 
Sbjct: 457 ALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMIS 516

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  GS+ EA  L  +M   E  + P+  TYN L+ A  +  +++ S  L+  M   G 
Sbjct: 517 GLCKKGSLSEANILLRKM--EEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574

Query: 576 DPDL----VTCNIFLTALK 590
             D     +  ++ L+A+K
Sbjct: 575 SADASSIKMVIDMLLSAMK 593



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 162/342 (47%), Gaps = 23/342 (6%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A++L   M+ S+ +P+ V +    + + +  +          +E      N Y  + +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+   +  K   A  +  ++M+ G +P+T  ++ LI GL   GK  EA  ++  M+ NGC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY+S++ G   SG    A+++ + M + N   +   YS +I  LC DG +  A  
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M ++G K  VV Y+S++ GLC AG   +   L  +M+  E    P+V T+N+LL+ 
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI--VPNVITFNVLLDV 307

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
             K+  +  + +L   M+ RG  P+++T N  +           DG    N         
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLM-----------DGYCMQN--------- 347

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            R S    ++++M++   SP   T+  +++  C  KR+   +
Sbjct: 348 -RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 18/290 (6%)

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K +DA+ L+++M+     P+ V +S     + R  + +   +   ++  NG A N +T +
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            ++  F    K   A  +   + K     +   ++ LI GL  +GK+ EA ++  +M+  
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC+PDVV Y+S+++G+C +G    AL L  +M   E   + DVFTY+ ++++LC+   I 
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKM--EERNVKADVFTYSTIIDSLCRDGCID 245

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------ 609
            +I L   M  +G    +VT N  +  L  K     DG   L ++  R            
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 610 ---LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                K  +     ++ + M+ + +SP   T+  ++   C   R+  A N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 155/509 (30%), Positives = 259/509 (50%), Gaps = 23/509 (4%)

Query: 164 IIQEGLYHRALE----FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           I++ GL+   L+     +  +V ++    LP+ + FN ++  + ++   D  I L  +M 
Sbjct: 56  ILRNGLHDMKLDDAIGLFGGMVKSRP---LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                  +YTY  L++  C+ +++  A+ LL +M   G  P+ VT + L+NG C    + 
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  LVD M   G  P+ +T+ TLIHGL L     +AV+L+DRMV   C PN VTYG ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           NGL K G       +L  ME  K   +  I++T+I  L K    +DA+ L+K+M  KG +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN V YS+LI  LC  G+  +A ++L +MI      N  T+++L+  F + GK  +A ++
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           + DM K +   +   Y+ L++G C   +L +A+ ++  M+S+ C PDVV Y+++I G C 
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           +  VE+  +LF EM         D  TY  L+  L    +  ++  +   M+  G  PD+
Sbjct: 413 SKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470

Query: 580 VTCNIFLTAL--KEKLEAPQDGTDFLNELAIRL------------FKRQRTSGGFKIVEV 625
           +T +I L  L    KLE   +  D++ +  I+L             K  +   G+ +   
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  K + P   T+  ++  LC  + +Q A
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEA 559



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 258/523 (49%), Gaps = 72/523 (13%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++AI LF  MV        V+ FN +L+ I +   +   +     +   + + I+    
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFDVVISLGEKM---QRLEIVHGLY 121

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N++I   CR   +  A+ L  +M     EP I T  +L++G C   R+ +AV L+D+M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  +TF  LI+GL  + +   A  LVD M  +GC PN VTY  +++GLC +G+ 
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241

Query: 314 DKAVSLLDRMVASKC-----------------------------------MPNEVTYGTI 338
           D A++LL++M A+K                                     PN VTY ++
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+ L   GR  D +++L  M E+K + N   ++ LI    KEGK  +A KL+  M+++  
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+   Y++L++G C   + D+A+++   M++  C  +  TY++L+KGF +S +     E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++++M+    V + V Y+ LI GL  DG    A+ V+ QM+S G  PD++ YS ++ GLC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481

Query: 519 NAGSVEEALKLFNEM------------------LCLEPKS---------------QPDVF 545
           N G +E+AL++F+ M                  +C   K                +P+V 
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           TYN +++ LC +  +  +  LL  M + G  P+  T N  + A
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 209/398 (52%), Gaps = 4/398 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ L   MV +  C+  + ++  V+N + + G    AL   N +  AK   I  + + F
Sbjct: 208 EAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK---IEADVVIF 263

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N +I ++C+   VD+A+ LF+EM  +   P++ TY +L+  LC   R  +A  LL +M  
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
               P  VTFN LI+   K G+   A KL D+M  +   P+  TYN+L++G C+   LDK
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  + + MV+  C P+ VTY T+I G  K  R  DG  +   M  R    +   Y+TLI 
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GLF +G  ++A K++KQM+  G  P+ + YS L+DGLC  GK ++A E+   M  +    
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           + + Y+++++G  ++GK     +++  ++      N V Y+ +I GLC    L+EA  + 
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +M   G  P+   Y+++I      G    + +L  EM
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 205/429 (47%), Gaps = 18/429 (4%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +LD+A+ L   M      P+ V FN L++ + K  +      L + M     +    TYN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI+  C +  +  A++LL +M+     P+ VT  +++NG     R  D   ++  M E 
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            +  +   ++TLI GLF   KA +A+ L  +M+++GC+PN V Y  +++GLC+ G  D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +L +M      A+   +++++    +      A+ ++K+M       N V YS LI  
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC  G+  +A  + + M+ +   P++V ++++I      G   EA KL+++M  ++    
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM--IKRSID 362

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PD+FTYN L+N  C    +  +  +   M+ + C PD+VT N  +     K +  +DGT+
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC-KSKRVEDGTE 421

Query: 602 FLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              E++ R               LF         K+ + M+   + P   T+  ++  LC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481

Query: 647 RPKRIQAAI 655
              +++ A+
Sbjct: 482 NNGKLEKAL 490



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 9/302 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF +LI  +   G F   E +   M   KR +    F +  +   +     +++A ++F 
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMI--KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV +  C   V ++N+++    +        E +  +    H  ++ +T+T+  +I+ +
Sbjct: 390 FMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREM---SHRGLVGDTVTYTTLIQGL 445

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
              G  DNA ++F++M      PDI TY  L+DGLC   +L++A+ + D MQ        
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             +  +I G+CK G++     L  ++ LKG  PN VTYNT+I GLC K  L +A +LL +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M     +PN  TY T+I   ++ G     A ++  M   +F V +     L++ +  +G+
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVANMLHDGR 624

Query: 383 AE 384
            +
Sbjct: 625 LD 626



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 17/194 (8%)

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +L +GL  D KL +A  ++  M+     P +V ++ ++  +      +  + L  +M  L
Sbjct: 56  ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLE 594
           E      ++TYNIL+N  C++S IS ++ LL  MM  G +P +VT +  L      +++ 
Sbjct: 115 EIVHG--LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 595 APQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                 D + E+  R            LF   + S    +V+ M+Q+   P   T+  VV
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 643 QELCRPKRIQAAIN 656
             LC+      A+N
Sbjct: 233 NGLCKRGDTDLALN 246


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  248 bits (634), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 254/490 (51%), Gaps = 6/490 (1%)

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCKRTVKSFNS 159
           ++++VL RM +   +    S+  + K     +  +EA+ L   M D+   C   V S+ +
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           V+N   +EG   +A   Y+ +++     ILPN +T++ +I  +C+   +D A+++   M 
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDR---GILPNVVTYSSIIAALCKAQAMDKAMEVLTSMV 261

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                P+  TY +++ G C   +  EA+  L +M  DG  P  VT+N L++ LCKNG   
Sbjct: 262 KNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCT 321

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A K+ D+M  +G  P   TY TL+ G   KG L +   LLD MV +   PN   +  +I
Sbjct: 322 EARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILI 381

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
               K G+      V   M ++  + +   Y T+I  L K G+ EDAM+ ++QM+++   
Sbjct: 382 CAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLS 441

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P  +VY++LI  LC   K D+A+E++ EM++ G   +   ++S++    + G+  ++ ++
Sbjct: 442 PGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKL 501

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           +  M +     + + YS LI G C  GK+ EA  +   M+S G KPD V Y+++I+G C 
Sbjct: 502 FDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCK 561

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
              +E+AL LF EM        PD+ TYNI+L  L +    + + +L   + + G   +L
Sbjct: 562 ISRMEDALVLFREM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLEL 619

Query: 580 VTCNIFLTAL 589
            T NI L  L
Sbjct: 620 STYNIILHGL 629



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 234/486 (48%), Gaps = 28/486 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  YN +  A    + PN  T+ +++ + C  G +D        +  +    D   +  
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTP 131

Query: 233 LMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           ++ GLC + R  +A+ ++L  M   GC P   ++N+L+ GLC +     A +L+  M   
Sbjct: 132 MLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDD 191

Query: 292 G--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
           G  C P+ V+Y T+I+G   +G+LDKA      M+    +PN VTY +II  L K  +A+
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCK-AQAM 250

Query: 350 DGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
           D A  VL SM +     N   Y++++ G    G+ ++A+   K+M   G +P+ V Y++L
Sbjct: 251 DKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSL 310

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           +D LC+ G+  EA ++   M   G      TY +L++G+   G   +   +   M +N  
Sbjct: 311 MDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 370

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N   +S+LI    + GK+ +A +V+++M  +G  PD V Y ++I  LC +G VE+A++
Sbjct: 371 HPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMR 430

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            F +M  ++ +  P    YN L+++LC       + +L+  M+DRG   D +        
Sbjct: 431 YFEQM--IDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTI-------- 480

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                        F N +     K  R     K+ ++M++  + P   T+  ++   C  
Sbjct: 481 -------------FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 527

Query: 649 KRIQAA 654
            ++  A
Sbjct: 528 GKMDEA 533



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 173/360 (48%), Gaps = 22/360 (6%)

Query: 316 AVSLLDRMV---ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           AVS  +RM    A +  PN  TYG ++      GR   G   L ++ ++ F V+   ++ 
Sbjct: 72  AVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTP 131

Query: 373 LISGLFKEGKAEDAMKL-WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           ++ GL  + +  DAM +  ++M + GC PN   Y+ L+ GLC   +  EA E+L  M ++
Sbjct: 132 MLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDD 191

Query: 432 G--CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           G  C  +  +Y++++ GFF+ G   KA   + +M     + N V YS +I  LC+   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  V T M+  G  P+   Y+S++HG C++G  +EA+    +M       +PDV TYN 
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKM--HSDGVEPDVVTYNS 309

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQDGTDFLNELA 607
           L++ LCK    + +  + +SM  RG  P++ T    L   A K  L       D +    
Sbjct: 310 LMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNG 369

Query: 608 IR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           I               K+ +      +   M Q+ L+P T T+  V+  LC+  R++ A+
Sbjct: 370 IHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAM 429



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 214/441 (48%), Gaps = 12/441 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ S++  Y +SG  K     L +M     E  VV   S +      G+     EA ++F
Sbjct: 271 TYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRC---TEARKMF 327

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIK 200
            +M      KR +K   +    ++Q      AL   + +++    N I PN   F+++I 
Sbjct: 328 DSMT-----KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILIC 382

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              + G VD A+ +F +M  +   PD  TY T++  LCK  R+++A+   ++M  +   P
Sbjct: 383 AYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSP 442

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             + +N LI+ LC   +  +A +L+  M  +G   + + +N++I   C +G + ++  L 
Sbjct: 443 GNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLF 502

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D MV     P+ +TY T+I+G    G+  +  ++L SM       +   Y+TLI+G  K 
Sbjct: 503 DLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKI 562

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            + EDA+ L+++M   G  P+ + Y+ ++ GL +  +   A+E+   +  +G      TY
Sbjct: 563 SRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTY 622

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  ++    +A+ +++++   +       ++++I  L + G+  EA+ ++  + +
Sbjct: 623 NIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682

Query: 501 RGCKPDVVAYSSMIHGLCNAG 521
            G  PDV  YS M   L   G
Sbjct: 683 NGLVPDVRTYSLMAENLIEQG 703


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 155/529 (29%), Positives = 271/529 (51%), Gaps = 28/529 (5%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++AI LF  M+        V  F+   + I +   ++  L+F   +   +   I  N  T
Sbjct: 70  DDAIALFQEMIRSRPLPSLV-DFSRFFSAIARTKQFNLVLDFCKQL---ELNGIAHNIYT 125

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N++I   CR      A  +  ++     EPD  T+ TL+ GL  E ++ EAV+L+D M 
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +GC P  VT+N ++NG+C++G+   A  L+  M  +    +  TY+T+I  LC  G +D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A+SL   M       + VTY +++ GL K G+  DGA +L  M  R+   N   ++ L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
               KEGK ++A +L+K+M+ +G  PN + Y+ L+DG C   +  EA  +L  M+ N C+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  T++SL+KG+    +    ++++++++K   V N V YS+L+ G C+ GK++ A  +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD--VFTYNILLN 552
           + +M+S G  PDV+ Y  ++ GLC+ G +E+AL++F ++     KS+ D  +  Y  ++ 
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL----QKSKMDLGIVMYTTIIE 481

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVT----------------CNIFLTALKEKLEAP 596
            +CK   +  + +L  S+  +G  P+++T                 NI L  ++E   AP
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            D T   N L     +    +   K++E M     S   S+ + V+  L
Sbjct: 542 NDCT--YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 162/342 (47%), Gaps = 23/342 (6%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A++L   M+ S+ +P+ V +    + + +  +          +E      N Y  + +
Sbjct: 70  DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+   +  K   A  +  ++M+ G +P+T  ++ LI GL   GK  EA  ++  M+ NGC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY+S++ G   SG    A+++ + M + N   +   YS +I  LC DG +  A  
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M ++G K  VV Y+S++ GLC AG   +   L  +M+  E    P+V T+N+LL+ 
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI--VPNVITFNVLLDV 307

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
             K+  +  + +L   M+ RG  P+++T N  +           DG    N         
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLM-----------DGYCMQN--------- 347

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            R S    ++++M++   SP   T+  +++  C  KR+   +
Sbjct: 348 -RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 18/290 (6%)

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K +DA+ L+++M+     P+ V +S     + R  + +   +   ++  NG A N +T +
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            ++  F    K   A  +   + K     +   ++ LI GL  +GK+ EA ++  +M+  
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC+PDVV Y+S+++G+C +G    AL L  +M   E   + DVFTY+ ++++LC+   I 
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKM--EERNVKADVFTYSTIIDSLCRDGCID 245

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------ 609
            +I L   M  +G    +VT N  +  L  K     DG   L ++  R            
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 610 ---LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                K  +     ++ + M+ + +SP   T+  ++   C   R+  A N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 160/617 (25%), Positives = 280/617 (45%), Gaps = 52/617 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ + I+ +  + DF + + V   MRR    + E ++  +     ++  VEEA      M
Sbjct: 245 TYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 304

Query: 145 VD-------------------------------EFHC---KRTVKSFNSVLNVIIQEGLY 170
           VD                               E  C   K  +  + ++++  ++EG  
Sbjct: 305 VDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKT 364

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
             A +    +++A    + PN + ++ +I+ +C++G +  A +L +EM      PD +TY
Sbjct: 365 AEAFDILKEMISA---GVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTY 421

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             LM G  +++  D A  LL+EM+  G  P   ++ ++INGLC+NGE   A  L++ M  
Sbjct: 422 NPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMIS 481

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G  PN   Y  LI G   +GN+  A   L++M  +   P+   Y ++I GL  +GR  +
Sbjct: 482 EGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEE 541

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
                  +++R    +E+ YS LI G  K G  E A +L +QM+  G KPN   Y+ L++
Sbjct: 542 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLE 601

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G  +    ++   IL  M+ +G   +   Y  +++    S     A  +  ++ KN  V 
Sbjct: 602 GYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVP 661

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +   YS LI GLC+   + +A  +  +M   G +P +V Y+++I G C +G +  A  +F
Sbjct: 662 DLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVF 721

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           + +L       P+  TY  L++  CK  +I+ + DL   M+DRG  PD    N+  T   
Sbjct: 722 DSILA--KGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCS 779

Query: 591 EKLEAPQ-------------DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           +  +  Q                   N L     KR +     K++ VM+ + + P   T
Sbjct: 780 DAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQT 839

Query: 638 WERVVQELCRPKRIQAA 654
            E+VV E  +  ++  A
Sbjct: 840 VEKVVSEFGKAGKLGEA 856



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 131/392 (33%), Positives = 202/392 (51%), Gaps = 2/392 (0%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            ILP+  T++  I+  C+    D A ++F EM  R+C  +  TY  ++ GLC+   ++EA
Sbjct: 238 GILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 297

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
               +EM   G  P   T+  L+NGLCK   L  A  L+D M   G  PN V Y TL+ G
Sbjct: 298 FGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDG 357

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
              +G   +A  +L  M+++   PN++ Y  +I GL K+G+    +++L  M +     +
Sbjct: 358 FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + Y+ L+ G F++   + A +L  +M   G  PN   Y  +I+GLC+ G+  EA  +L 
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLE 477

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EMI+ G   NAF Y+ L+ G  + G    A E  + M K N   +  CY+ LI GL   G
Sbjct: 478 EMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVG 537

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           ++ EA   + Q+  RG  PD   YS +IHG C  G++E+A +L  +M  L    +P+  T
Sbjct: 538 RMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQM--LNSGLKPNADT 595

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           Y  LL    K ++      +L SM+  G  PD
Sbjct: 596 YTDLLEGYFKSNDYEKVSSILQSMLGSGDKPD 627



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 243/535 (45%), Gaps = 55/535 (10%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
            RA++  +H    +  +  P+T   ++++ T  + G V NA Q+   M      P     
Sbjct: 156 QRAIQDTDH----RSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCC 211

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             L+  L + + ++    L   M+  G  P   T++  I   CK  +   A K+ + M  
Sbjct: 212 NGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRR 271

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           + C  NEVTYN +I GLC  G +++A    + MV     P+  TYG ++NGL K  R  +
Sbjct: 272 RDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKE 331

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +L  M       N  +Y TL+ G  KEGK  +A  + K+M+  G +PN ++Y  LI 
Sbjct: 332 AKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIR 391

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC++G+   A ++L EMI  G   + FTY+ LM+G F+      A E+  +M  +  + 
Sbjct: 392 GLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILP 451

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK-------------------------- 504
           N   Y ++I+GLC++G+ +EA  +  +M+S G K                          
Sbjct: 452 NVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEAL 511

Query: 505 ---------PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
                    PD+  Y+S+I GL   G +EEA + + ++   +    PD FTY+ L++  C
Sbjct: 512 EKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQV--QKRGLVPDEFTYSGLIHGYC 569

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFL-------------TALKEKLEAPQDGTDF 602
           K  N+  +  LL  M++ G  P+  T    L             + L+  L +     + 
Sbjct: 570 KTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNH 629

Query: 603 LNELAIR-LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +  + IR L + +     F ++  + +  L P    +  ++  LC+   ++ A+ 
Sbjct: 630 IYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 188/414 (45%), Gaps = 37/414 (8%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V S+  ++N + Q G    A      +++     + PN   +  +I    + G +  A +
Sbjct: 453 VYSYGIMINGLCQNGESKEAGNLLEEMISE---GLKPNAFMYAPLIIGHSKEGNISLACE 509

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
              +M   N  PD++ Y +L+ GL    R++EA     ++Q  G  P   T++ LI+G C
Sbjct: 510 ALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYC 569

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G L +A +L+  M   G  PN  TY  L+ G     + +K  S+L  M+ S   P+  
Sbjct: 570 KTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNH 629

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            YG +I  L +         VL  +E+     + +IYS+LISGL K    E A+ L  +M
Sbjct: 630 IYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEM 689

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            ++G +P  V Y+ALIDG CR G    A  +   ++  G   N  TY++L+ G  ++G  
Sbjct: 690 AKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDI 749

Query: 454 HKAVEIWKDM-----AKNNCVYNEVC-----------------------------YSVLI 479
             A +++K+M     A +  VYN +                              ++ L+
Sbjct: 750 TDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLV 809

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           HG C+ GKL+E   +   M+ R   P+      ++     AG + EA ++F E+
Sbjct: 810 HGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAEL 863



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 168/361 (46%), Gaps = 9/361 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SLI+  +  G  +  E    ++++   V  E ++  +   Y K   +E+A +L   M+
Sbjct: 526 YNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQML 585

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           +    K    ++  +L    +   Y +       ++ +      P+   + +VI+ + R 
Sbjct: 586 NS-GLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDK---PDNHIYGIVIRNLSRS 641

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
             ++ A  +  E+      PD++ Y +L+ GLCK   +++AV LLDEM  +G  P  V +
Sbjct: 642 ENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCY 701

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N LI+G C++G++ RA  + D++  KG +PN VTY  LI G C  G++  A  L   M+ 
Sbjct: 702 NALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLD 761

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE--RKFHVNEYIYSTLISGLFKEGKA 383
               P+   Y  +  G      A D  + L   EE   + + N  +++TL+ G  K GK 
Sbjct: 762 RGIAPDAFVYNVLATGC---SDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKL 818

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++  KL   MM++   PN      ++    + GK  EA  +  E+     + +A    SL
Sbjct: 819 QETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSL 878

Query: 444 M 444
           +
Sbjct: 879 L 879



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/313 (22%), Positives = 131/313 (41%), Gaps = 40/313 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y  +G+ +  + +L +M          ++  + + Y K++  E+   +  +M
Sbjct: 560 TYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIKTVC 203
           +         K  N +  ++I+       +E    ++     N ++P+   ++ +I  +C
Sbjct: 620 LGSGD-----KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC 674

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           ++  ++ A+ L  EM     EP I  Y  L+DG C+   +  A  + D +   G  P  V
Sbjct: 675 KIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCV 734

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN---------------------- 301
           T+  LI+G CKNG++  A  L   M  +G  P+   YN                      
Sbjct: 735 TYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM 794

Query: 302 ------------TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
                       TL+HG C +G L +   LL  M+  + +PN  T   +++   K G+  
Sbjct: 795 FNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLG 854

Query: 350 DGARVLMSMEERK 362
           +  RV   ++++K
Sbjct: 855 EAHRVFAELQQKK 867


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  248 bits (634), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 152/512 (29%), Positives = 266/512 (51%), Gaps = 15/512 (2%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI--FIFK 126
           +F+S  ++ +Y     T   ++ +Y  + +F  ++ V+  M  EKR V         +  
Sbjct: 147 VFSSNSEVNTY-----TLNIMVHNYCKALEFDKVDAVISEM--EKRCVFPDVVTHNVMVD 199

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           A  +A   E A+ L  +MV +   K  + ++NSVL  + + G++ +A E +  + +    
Sbjct: 200 ARFRAGDAEAAMALVDSMVSK-GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD---F 255

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            + P+  +F ++I   CR+G ++ A+++++EM  R  +PD+ ++  L+    +  ++D A
Sbjct: 256 GVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA 315

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           +  L EM+  G  P  V + ++I G C+ G +  A ++ D M   GCLP+ VTYNTL++G
Sbjct: 316 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 375

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC +  L  A  LL+ M      P+  T+ T+I+G    G+     ++  +M  ++   +
Sbjct: 376 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 435

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+TLI G+ ++G  + A  LW  M  +   PN V YS LID  C  G+ ++A   L 
Sbjct: 436 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EMIN G   N  TY+S++KG+  SG   K  +  + M  N    + + Y+ LIHG  ++ 
Sbjct: 496 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 555

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ +A  +   M     +PDVV Y+ +I+G    G+V+EA  +F +M C +   +PD +T
Sbjct: 556 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKM-CAK-GIEPDRYT 613

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           Y  ++N      N   +  L + M+ RG  PD
Sbjct: 614 YMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 221/428 (51%), Gaps = 5/428 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V + N +++   + G    A+   + +V+     + P  +T+N V+K +CR G+ D A +
Sbjct: 191 VVTHNVMVDARFRAGDAEAAMALVDSMVSK---GLKPGIVTYNSVLKGLCRSGMWDKAWE 247

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F+EM      PD+ ++  L+ G C+   ++EA+ +  EM+  G  P  V+F+ LI    
Sbjct: 248 VFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFA 307

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           + G++  A   +  M   G +P+ V Y  +I G C  G +  A+ + D MV   C+P+ V
Sbjct: 308 RRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVV 367

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T++NGL K  R +D   +L  M ER    +   ++TLI G   EGK + A++L+  M
Sbjct: 368 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + +  +P+ V Y+ LIDG+CR G  D+A ++  +M +     N  TYS L+    E G+ 
Sbjct: 428 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 487

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A     +M     + N + Y+ +I G C  G + + +    +M+     PD++ Y+++
Sbjct: 488 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 547

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           IHG      + +A KL N M   + K QPDV TYN+L+N      N+  +  +   M  +
Sbjct: 548 IHGYIKEDKMHDAFKLLNMM--EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 605

Query: 574 GCDPDLVT 581
           G +PD  T
Sbjct: 606 GIEPDRYT 613



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 228/464 (49%), Gaps = 15/464 (3%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN- 187
           G  HL  +A RL       F     V ++   LN+++    Y +ALEF         M  
Sbjct: 135 GWPHLAADAYRLV------FSSNSEVNTYT--LNIMVHN--YCKALEFDKVDAVISEMEK 184

Query: 188 --ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             + P+ +T N+++    R G  + A+ L   M  +  +P I TY +++ GLC+    D+
Sbjct: 185 RCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDK 244

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  +  EM   G  P   +F +LI G C+ GE+  A K+   M  +G  P+ V+++ LI 
Sbjct: 245 AWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIG 304

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
               +G +D A++ L  M     +P+ V Y  +I G  + G   D  RV   M       
Sbjct: 305 LFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 364

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   Y+TL++GL KE +  DA  L  +M E+G  P+   ++ LI G C  GK D+A ++ 
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M+N     +  TY++L+ G    G   KA ++W DM       N V YS+LI   CE 
Sbjct: 425 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G++ +A     +M+++G  P+++ Y+S+I G C +G+V +  K   +M+    K  PD+ 
Sbjct: 485 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV--NKVSPDLI 542

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           TYN L++   K+  +  +  LLN M      PD+VT N+ +   
Sbjct: 543 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 586



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 224/465 (48%), Gaps = 16/465 (3%)

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G    A   +R +   N E + YT   ++   CK    D+   ++ EM+    FP  V
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 192

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T NV+++   + G+   A  LVD+M  KG  P  VTYN+++ GLC  G  DKA  +   M
Sbjct: 193 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 252

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                 P+  ++  +I G  ++G   +  ++   M  R    +   +S LI    + GK 
Sbjct: 253 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 312

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + AM   ++M   G  P+ V+Y+ +I G CR G   +A  +  EM+  GC  +  TY++L
Sbjct: 313 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 372

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  +  +   A  +  +M +     +   ++ LIHG C +GKL +A  ++  ML++  
Sbjct: 373 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 432

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +PD+V Y+++I G+C  G +++A  L+++M   E    P+  TY+IL+++ C++  +  +
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE--IFPNHVTYSILIDSHCEKGQVEDA 490

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDFL--NELAIR 609
              L+ M+++G  P+++T N  +                +K+   +   D +  N L   
Sbjct: 491 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 550

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             K  +    FK++ +M ++ + P   T+  ++        +Q A
Sbjct: 551 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 595



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 6/190 (3%)

Query: 146 DEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           D+ H +       +++ +++   ++G    A  F + ++N     ILPN +T+N +IK  
Sbjct: 460 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK---GILPNIMTYNSIIKGY 516

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CR G V    +  ++M V    PD+ TY TL+ G  KE+++ +A  LL+ M+ +   P  
Sbjct: 517 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDV 576

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N+LING   +G +  A  + + M  KG  P+  TY ++I+G    GN  +A  L D 
Sbjct: 577 VTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDE 636

Query: 323 MVASKCMPNE 332
           M+     P++
Sbjct: 637 MLQRGFAPDD 646



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 113/229 (49%), Gaps = 6/229 (2%)

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           ++  LI    +  K  +A + ++ +++          +AL+  L R G P  A +    +
Sbjct: 88  VFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLV 147

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIHGLCEDGK 487
            ++    N +T + ++  + ++ +  K   +  +M K  CV+ +V  ++V++      G 
Sbjct: 148 FSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKR-CVFPDVVTHNVMVDARFRAGD 206

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
              A  +   M+S+G KP +V Y+S++ GLC +G  ++A ++F EM   +    PDV ++
Sbjct: 207 AEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM--DDFGVAPDVRSF 264

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLV--TCNIFLTALKEKLE 594
            IL+   C+   I  ++ +   M  RG  PDLV  +C I L A + K++
Sbjct: 265 TILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMD 313



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 110/273 (40%), Gaps = 31/273 (11%)

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           GRA +   +L+ M  R+      I S+L+                         P   V+
Sbjct: 50  GRASECQSLLLRMSRRRGACRREIVSSLLG--------------------SSPTPQPRVF 89

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
             LI    +  KP EA E    ++++     A   ++L+     +G  H A + ++ +  
Sbjct: 90  DLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADAYRLVFS 149

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
           +N   N    ++++H  C+  +  +   V ++M  R   PDVV ++ M+     AG  E 
Sbjct: 150 SNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEA 209

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A+ L + M+    K  P + TYN +L  LC+      + ++   M D G  PD+ +  I 
Sbjct: 210 AMALVDSMVSKGLK--PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTIL 267

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           +       E          E A++++K  R  G
Sbjct: 268 IGGFCRVGEI---------EEALKIYKEMRHRG 291


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 249/493 (50%), Gaps = 19/493 (3%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKA-------------HLVEEAIRLFHTMV 145
           F ++  +L +  R +   L  S IF + AY  A             H ++ A  +F  MV
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            +  C     ++++++N +  EG    A++    +V      I P   T+ + + ++C  
Sbjct: 265 KD-GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK---GIEPTVYTYTIPLVSLCDA 320

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G    A++L  +M  R C P+I T+  L+ GL ++ + + A+ L  +M  DG  PT VT+
Sbjct: 321 GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTY 380

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N LIN LC  G    A  +   M   G LP+  TYN +I   CL G++ KA+ + D+M+ 
Sbjct: 381 NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +   PN +TY T+I G  K G   +  R+L  M+      + + Y+ LISG  + GK E 
Sbjct: 441 AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEH 500

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A  L+  MME G  PN V Y+A+IDG   + K D+A  + ++M+ +G   ++ TY+ ++ 
Sbjct: 501 ATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMIS 560

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           GF ++    +A      M K   + N + Y+  I GLC +G+   A  ++ +M  R   P
Sbjct: 561 GFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFP 620

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSI 564
           ++  YSS+I+GLC  G  E+A +++N +  L     +P+V TY  L+  LC +     + 
Sbjct: 621 NLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 565 DLLNSMMDRGCDP 577
            L+ SM  +G  P
Sbjct: 680 QLVVSMQKKGLQP 692



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 270/579 (46%), Gaps = 66/579 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  +    GK  +V+ A  ++  M++    + ++ +FN+++N++ ++G    A    +H
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNS-GIRPSLLTFNTMINILCKKGRVQEAKLIMSH 227

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I      +  PN  T+  +I   CR   +D A  +F  M    C+P+  TY TL++GLC 
Sbjct: 228 IFR---YDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCS 284

Query: 240 ENRLDEAVLLLDEM-----------------------------------QVDGCFPTPVT 264
           E RL+EA+ +L+EM                                   +  GC P   T
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           F  LI+GL ++G+   A  L   M   G +P  VTYN LI+ LC++G  + A ++   M+
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWML 404

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +   +P+  TY  II     +G       +   M +     N   Y+TLI G  K+G   
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +AM+L + M   G KP+   Y+ LI G  R GK + A  + + M+ +G + N  TY++++
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+F   K   A+ ++  M ++  + +   Y+V+I G  +   + EA     +M+ +G  
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNISHS 563
           P+V+ Y+S I GLC  G    A K+F+EM   E ++  P+++TY+ L+  LC++     +
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEM---EKRNYFPNLYTYSSLIYGLCQEGRAEDA 641

Query: 564 --IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFK 621
              +LL  +   GC+P++                     D    L   L    R     +
Sbjct: 642 EMYNLLARLTHYGCEPNV---------------------DTYTTLVKGLCGEGRCYEADQ 680

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWS 660
           +V  M +K L P    +  ++   C+  ++++A+N  +S
Sbjct: 681 LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYS 719



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 176/668 (26%), Positives = 300/668 (44%), Gaps = 75/668 (11%)

Query: 29  TIPSERSHRFFSVRSAVSS-NKQMETEPQGN---AKSEQPF------------------S 66
           T P   SH  FS+R +  S N   E  P      + +  PF                  S
Sbjct: 7   TSPRMASHALFSLRGSHQSFNLSSEPHPSSPLPISSTTNPFPELVSKISTILSSPKWEHS 66

Query: 67  DEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-------------K 113
            E+ + +PKL  + +      +++Q + N+     L    +  RR+              
Sbjct: 67  SELCHLSPKLKPHHV-----VNILQTHKNTDSV--LRFFFWISRRKFFKHDMSCFVSMLN 119

Query: 114 RVVLEKSF-------IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ 166
           R+V ++ F       I + K+      V+   +    +  ++    T+ SF ++L  + +
Sbjct: 120 RLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGK 179

Query: 167 EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
             +   A + Y  ++N+    I P+ LTFN +I  +C+ G V  A  +   +   +  P+
Sbjct: 180 FDMVDLARDMYIKMLNS---GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPN 236

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
            +TY +L+ G C+ + LD A  + D M  DGC P  VT++ LINGLC  G L  A  +++
Sbjct: 237 AFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLE 296

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M  KG  P   TY   +  LC  G   +AV LL +M    C+PN  T+  +I+GL + G
Sbjct: 297 EMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDG 356

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           +      +   M           Y+ LI+ L  EG+ E A  ++K M+  G  P+T  Y+
Sbjct: 357 KFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYN 416

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            +I   C +G   +A  I  +M+  G + N  TY++L+ G+ + G  + A+ + + M  N
Sbjct: 417 EIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN 476

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               +   Y+ LI G    GKL  A  ++  M+  G  P+ V Y+++I G  N   V++A
Sbjct: 477 GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDA 536

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L LF +M  +E  + P   TYN++++   K ++IS + +    M+ +G  P+++T   F+
Sbjct: 537 LALFWKM--VESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                      DG          L +  RT   FKI   M ++   P   T+  ++  LC
Sbjct: 595 -----------DG----------LCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLC 633

Query: 647 RPKRIQAA 654
           +  R + A
Sbjct: 634 QEGRAEDA 641



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 249/498 (50%), Gaps = 11/498 (2%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           +L +M++   V   ++F  +     +    E AI L+H M+ +     TV ++N+++N +
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV-TYNALINQL 387

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
             EG +  A   +  +++      LP+T T+N +IK  C +G +  A+ +F +M      
Sbjct: 388 CVEGRFETAFTIFKWMLSHGS---LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P++ TY TL+ G CK+  L+ A+ LL+ M+ +G  P   T+  LI+G  + G+L  A  L
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
              M   G  PN VTY  +I G      +D A++L  +MV S  +P+  TY  +I+G  K
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
                +       M ++    N   Y++ I GL + G+   A K++ +M ++   PN   
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 405 YSALIDGLCRVGKPDEAE--EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           YS+LI GLC+ G+ ++AE   +L  + + GC  N  TY++L+KG    G+ ++A ++   
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M K     +E  Y  L+ G C++ K+  A  ++  M + G +  +  Y ++I  LC    
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           +EEA  +F  M  LE     D   + +LL+ L K+      + LL+ M  R C  +  T 
Sbjct: 745 IEEAQCIFQTM--LEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802

Query: 583 NIF---LTALKEKLEAPQ 597
            +    L+AL   ++ PQ
Sbjct: 803 VMLARELSALDCAIKIPQ 820



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 14/400 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  +I+ +   GD +   ++  +M +      V+   + I+    Y K   +  A+RL 
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIY---GYCKQGNLNNAMRLL 470

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEG-LYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
             M      K    ++  +++   + G L H    FY  + +     I PN +T+  +I 
Sbjct: 471 EIMKGN-GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG----ISPNHVTYTAIID 525

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
               L  VD+A+ LF +M      P   TY  ++ G  K N + EA     +M   G  P
Sbjct: 526 GYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP 585

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA--VS 318
             +T+   I+GLC+NG  G A K+   M  +   PN  TY++LI+GLC +G  + A   +
Sbjct: 586 NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYN 645

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           LL R+    C PN  TY T++ GL   GR  +  ++++SM+++    +E IY  L+ G  
Sbjct: 646 LLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGEC 705

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K  K E A+ ++  M   G + +   Y ALI  LC+    +EA+ I   M+     ++  
Sbjct: 706 KNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            ++ L+ G  + G+    +++   M   NC  N   Y +L
Sbjct: 766 AWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 172/379 (45%), Gaps = 7/379 (1%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           IF+   K GS      T+ +LI  Y   G+  +   +L  M+         ++  +   +
Sbjct: 434 IFDKMLKAGS-SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            +   +E A  LF+ M++       V ++ ++++          AL  +  +V + +   
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHV-TYTAIIDGYFNLAKVDDALALFWKMVESGN--- 548

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP++ T+N++I    +   +  A     +M  +   P++ TY + +DGLC+  R   A  
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNG--ELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           +  EM+    FP   T++ LI GLC+ G  E      L+  +   GC PN  TY TL+ G
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC +G   +A  L+  M      P+E  Y  ++ G  K  +      +  SM+   F ++
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y  LI  L KE   E+A  +++ M+EK    + V ++ L+DGL + G+ D   ++L 
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLH 788

Query: 427 EMINNGCAANAFTYSSLMK 445
            M +  C  N  TY  L +
Sbjct: 789 VMESRNCTLNFQTYVMLAR 807


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 265/537 (49%), Gaps = 42/537 (7%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           ++ +++    SG F++   VL  M  +   +   +   +  A  +   V+EA+ L   + 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
             F C+  + S+N+VL  +     +    E  + +V    ++  PN +TFN +I  +CR 
Sbjct: 209 F-FGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV---RVDCAPNIVTFNTLIGYLCRN 264

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           GL +   ++  +M    C PDI  Y T++DG+CKE  L+ A  +L+ M   G  P  V +
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N ++ GLC       A +L+  MF K C  ++VT+N L+   C  G +D+ + LL++M++
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
             CMP+ +TY T+IN                                   G  KEG  ++
Sbjct: 385 HGCMPDVITYTTVIN-----------------------------------GFCKEGLIDE 409

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A+ L K M   GCKPNTV Y+ ++ GLC  G+  +AEE++ +MI  GC  N  T+++L+ 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
              + G   +A+E+ K M  N C  + + YS +I GL + GK  EA  +   M+++G  P
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           + + YSS+   L   G V + +++F+ +   +   + D   YN ++++LCK+     +ID
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIK--DTTIRSDAVLYNAVISSLCKRWETDRAID 587

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
               M+  GC P+  T  + +  L  +  A ++  + L+EL  R   R+     F I
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLA-KEAQELLSELCSRGALRKHLMRHFGI 643



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 247/487 (50%), Gaps = 23/487 (4%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +       A  + + PN  TF  V++ +C  G + +A+++  EM  + C P    
Sbjct: 89  YCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM 148

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  +++  C+      +V +L+ M   GC       N+++N +C+ G +  A  L+  + 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC  + V+YN ++ GLC+         L+D MV   C PN VT+ T+I  L + G   
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               VL  M E     +  +Y+T+I G+ KEG  E A ++  +M   G KPN V Y+ ++
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   +  EAEE+L EM    C  +  T++ L+  F ++G   + +E+ + M  + C+
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + + Y+ +I+G C++G + EA M+   M S GCKP+ V+Y+ ++ GLC+AG   +A +L
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++M  ++    P+  T+N L+N LCK+  +  +I+LL  M+  GC PDL++ +  +   
Sbjct: 449 MSQM--IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI--- 503

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                   DG          L K  +T    +++ VM+ K +SP T  +  +   L R  
Sbjct: 504 --------DG----------LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 650 RIQAAIN 656
           R+   I 
Sbjct: 546 RVNKVIQ 552



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 202/379 (53%), Gaps = 4/379 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI +   +G F+ +  VL +M         + +  I     K   +E A  + + M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
              +  K  V  +N+VL  +     +  A E  + +      +   + +TFN+++   C+
Sbjct: 313 -PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF---QKDCPLDDVTFNILVDFFCQ 368

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLVD  I+L  +M    C PD+ TY T+++G CKE  +DEAV+LL  M   GC P  V+
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + +++ GLC  G    A +L+  M  +GC PN VT+NTLI+ LC KG +++A+ LL +M+
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C P+ ++Y T+I+GL K G+  +   +L  M  +    N  IYS++   L +EG+  
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
             ++++  + +   + + V+Y+A+I  LC+  + D A +    M++NGC  N  TY+ L+
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608

Query: 445 KGFFESGKGHKAVEIWKDM 463
           KG    G   +A E+  ++
Sbjct: 609 KGLASEGLAKEAQELLSEL 627



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 31/212 (14%)

Query: 407 ALIDGLCRVGKPDEAEEILF------------EMINNGCAA-----------------NA 437
           ALI  LC  G+  EA   L              M+   C A                 NA
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           +T+  +++G    G+   A+E+  +M+   C      Y V++   C  G  R +  V   
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M ++GC  D    + +++ +C  G V+EA+ L  ++       + D+ +YN +L  LC  
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF--GCEADIVSYNAVLKGLCMA 229

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                  +L++ M+   C P++VT N  +  L
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 34/118 (28%)

Query: 507 VVAYSSM--------------------------------IHGLCNAGSVEEALKLFNEML 534
           VVAY++M                                + GLC  G + +AL++ +EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
                  P +  Y+++L A C+     +S+ +L +M  +GC  D   CN+ L A+ E+
Sbjct: 139 FKGCAPIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  248 bits (633), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 150/493 (30%), Positives = 249/493 (50%), Gaps = 19/493 (3%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKA-------------HLVEEAIRLFHTMV 145
           F ++  +L +  R +   L  S IF + AY  A             H ++ A  +F  MV
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMV 264

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            +  C     ++++++N +  EG    A++    +V      I P   T+ + + ++C  
Sbjct: 265 KD-GCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQK---GIEPTVYTYTIPLVSLCDA 320

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G    A++L  +M  R C P+I T+  L+ GL ++ + + A+ L  +M  DG  PT VT+
Sbjct: 321 GCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTY 380

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N LIN LC  G    A  +   M   G LP+  TYN +I   CL G++ KA+ + D+M+ 
Sbjct: 381 NALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLK 440

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +   PN +TY T+I G  K G   +  R+L  M+      + + Y+ LISG  + GK E 
Sbjct: 441 AGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEH 500

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A  L+  MME G  PN V Y+A+IDG   + K D+A  + ++M+ +G   ++ TY+ ++ 
Sbjct: 501 ATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMIS 560

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           GF ++    +A      M K   + N + Y+  I GLC +G+   A  ++ +M  R   P
Sbjct: 561 GFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFP 620

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSI 564
           ++  YSS+I+GLC  G  E+A +++N +  L     +P+V TY  L+  LC +     + 
Sbjct: 621 NLYTYSSLIYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 565 DLLNSMMDRGCDP 577
            L+ SM  +G  P
Sbjct: 680 QLVVSMQKKGLQP 692



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 154/579 (26%), Positives = 270/579 (46%), Gaps = 66/579 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  +    GK  +V+ A  ++  M++    + ++ +FN+++N++ ++G    A    +H
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNS-GIRPSLLTFNTMINILCKKGRVQEAKLIMSH 227

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I      +  PN  T+  +I   CR   +D A  +F  M    C+P+  TY TL++GLC 
Sbjct: 228 IF---RYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCS 284

Query: 240 ENRLDEAVLLLDEM-----------------------------------QVDGCFPTPVT 264
           E RL+EA+ +L+EM                                   +  GC P   T
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           F  LI+GL ++G+   A  L   M   G +P  VTYN LI+ LC++G  + A ++   M+
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWML 404

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +   +P+  TY  II     +G       +   M +     N   Y+TLI G  K+G   
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +AM+L + M   G KP+   Y+ LI G  R GK + A  + + M+ +G + N  TY++++
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+F   K   A+ ++  M ++  + +   Y+V+I G  +   + EA     +M+ +G  
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNISHS 563
           P+V+ Y+S I GLC  G    A K+F+EM   E ++  P+++TY+ L+  LC++     +
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEM---EKRNYFPNLYTYSSLIYGLCQEGRAEDA 641

Query: 564 --IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFK 621
              +LL  +   GC+P++                     D    L   L    R     +
Sbjct: 642 EMYNLLARLTHYGCEPNV---------------------DTYTTLVKGLCGEGRCYEADQ 680

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWS 660
           +V  M +K L P    +  ++   C+  ++++A+N  +S
Sbjct: 681 LVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYS 719



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 176/668 (26%), Positives = 300/668 (44%), Gaps = 75/668 (11%)

Query: 29  TIPSERSHRFFSVRSAVSS-NKQMETEPQGN---AKSEQPF------------------S 66
           T P   SH  FS+R +  S N   E  P      + +  PF                  S
Sbjct: 7   TSPRMASHALFSLRGSHQSFNLSSEPHPSSPLPISSTTNPFPELVSKISTILSSPKWEHS 66

Query: 67  DEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-------------K 113
            E+ + +PKL  + +      +++Q + N+     L    +  RR+              
Sbjct: 67  SELCHLSPKLKPHHV-----VNILQTHKNTDSV--LRFFFWISRRKFFKHDMSCFVSMLN 119

Query: 114 RVVLEKSF-------IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ 166
           R+V ++ F       I + K+      V+   +    +  ++    T+ SF ++L  + +
Sbjct: 120 RLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGK 179

Query: 167 EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
             +   A + Y  ++N+    I P+ LTFN +I  +C+ G V  A  +   +   +  P+
Sbjct: 180 FDMVDLARDMYIKMLNS---GIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPN 236

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
            +TY +L+ G C+ + LD A  + D M  DGC P  VT++ LINGLC  G L  A  +++
Sbjct: 237 AFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLE 296

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M  KG  P   TY   +  LC  G   +AV LL +M    C+PN  T+  +I+GL + G
Sbjct: 297 EMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDG 356

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           +      +   M           Y+ LI+ L  EG+ E A  ++K M+  G  P+T  Y+
Sbjct: 357 KFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYN 416

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            +I   C +G   +A  I  +M+  G + N  TY++L+ G+ + G  + A+ + + M  N
Sbjct: 417 EIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGN 476

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               +   Y+ LI G    GKL  A  ++  M+  G  P+ V Y+++I G  N   V++A
Sbjct: 477 GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDA 536

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L LF +M  +E  + P   TYN++++   K ++IS + +    M+ +G  P+++T   F+
Sbjct: 537 LALFWKM--VESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                      DG          L +  RT   FKI   M ++   P   T+  ++  LC
Sbjct: 595 -----------DG----------LCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLC 633

Query: 647 RPKRIQAA 654
           +  R + A
Sbjct: 634 QEGRAEDA 641



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 249/498 (50%), Gaps = 11/498 (2%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           +L +M++   V   ++F  +     +    E AI L+H M+ +     TV ++N+++N +
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTV-TYNALINQL 387

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
             EG +  A   +  +++      LP+T T+N +IK  C +G +  A+ +F +M      
Sbjct: 388 CVEGRFETAFTIFKWMLSHGS---LPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P++ TY TL+ G CK+  L+ A+ LL+ M+ +G  P   T+  LI+G  + G+L  A  L
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSL 504

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
              M   G  PN VTY  +I G      +D A++L  +MV S  +P+  TY  +I+G  K
Sbjct: 505 FYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSK 564

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
                +       M ++    N   Y++ I GL + G+   A K++ +M ++   PN   
Sbjct: 565 TNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYT 624

Query: 405 YSALIDGLCRVGKPDEAE--EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           YS+LI GLC+ G+ ++AE   +L  + + GC  N  TY++L+KG    G+ ++A ++   
Sbjct: 625 YSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVS 684

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M K     +E  Y  L+ G C++ K+  A  ++  M + G +  +  Y ++I  LC    
Sbjct: 685 MQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENF 744

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           +EEA  +F  M  LE     D   + +LL+ L K+      + LL+ M  R C  +  T 
Sbjct: 745 IEEAQCIFQTM--LEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802

Query: 583 NIF---LTALKEKLEAPQ 597
            +    L+AL   ++ PQ
Sbjct: 803 VMLARELSALDCAIKIPQ 820



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 186/400 (46%), Gaps = 14/400 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  +I+ +   GD +   ++  +M +      V+   + I+    Y K   +  A+RL 
Sbjct: 414 TYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIY---GYCKQGNLNNAMRLL 470

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEG-LYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
             M      K    ++  +++   + G L H    FY  + +     I PN +T+  +I 
Sbjct: 471 EIMKGN-GLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHG----ISPNHVTYTAIID 525

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
               L  VD+A+ LF +M      P   TY  ++ G  K N + EA     +M   G  P
Sbjct: 526 GYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLP 585

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA--VS 318
             +T+   I+GLC+NG  G A K+   M  +   PN  TY++LI+GLC +G  + A   +
Sbjct: 586 NVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYN 645

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           LL R+    C PN  TY T++ GL   GR  +  ++++SM+++    +E IY  L+ G  
Sbjct: 646 LLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGEC 705

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K  K E A+ ++  M   G + +   Y ALI  LC+    +EA+ I   M+     ++  
Sbjct: 706 KNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            ++ L+ G  + G+    +++   M   NC  N   Y +L
Sbjct: 766 VWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/379 (26%), Positives = 173/379 (45%), Gaps = 7/379 (1%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           IF+   K GS      T+ +LI  Y   G+  +   +L  M+         ++  +   +
Sbjct: 434 IFDKMLKAGS-SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            +   +E A  LF+ M++       V ++ ++++          AL  +  +V + +   
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHV-TYTAIIDGYFNLAKVDDALALFWKMVESGN--- 548

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP++ T+N++I    +   +  A     +M  +   P++ TY + +DGLC+  R   A  
Sbjct: 549 LPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFK 608

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNG--ELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           +  EM+    FP   T++ LI GLC+ G  E      L+  +   GC PN  TY TL+ G
Sbjct: 609 IFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKG 668

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC +G   +A  L+  M      P+E  Y  ++ G  K  +      +  SM+   F ++
Sbjct: 669 LCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLH 728

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y  LI  L KE   E+A  +++ M+EK    + VV++ L+DGL + G+ D   ++L 
Sbjct: 729 LSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLH 788

Query: 427 EMINNGCAANAFTYSSLMK 445
            M +  C  N  TY  L +
Sbjct: 789 VMESRNCTLNFQTYVMLAR 807


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 144/473 (30%), Positives = 248/473 (52%), Gaps = 13/473 (2%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLF-REMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
            + PN  T+N++++ +C  G  + A+ +   +M    C P++ TY TL+   C+   +D 
Sbjct: 149 GVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDA 208

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  L+  M+  G  P+ VTFN ++NGLCK G +  A K+ D M  +G  P+ V+YNTL+ 
Sbjct: 209 AERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVS 268

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C  G L +A+++   M     +P+ VT+ ++I+ + + G       ++  M ER   +
Sbjct: 269 GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRM 328

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           NE+ ++ LI G  + G  +DA+   K+M E   +P+ V Y+ LI+G C++G+ DEA E++
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM   G   +  TYS+++ G+ + G    A E+ + M K   V + + YS LI GLCE+
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            +L +A  ++ +ML  G +PD   Y+++I G C  G+V++AL L +EM+  +    PDV 
Sbjct: 449 RRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMI--KKGVLPDVV 506

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQDGTDFL 603
           TY++L++ L K +    +  LL  +      PD    NI   AL    +    +     L
Sbjct: 507 TYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPD----NIKYEALMHCCRTAEFKSVVALL 562

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              +++    Q      K+ + ML +      S +  ++   CR   I  A++
Sbjct: 563 KGFSMKGLMNQAD----KVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALS 611



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 230/438 (52%), Gaps = 6/438 (1%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A RL  +M+ +      V ++N ++  +   G    AL       + +     PN +T+N
Sbjct: 138 ARRLLASMLRD-GVAPNVYTYNILVRALCARGQREEALGVVGD--DMRGAGCAPNVVTYN 194

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            ++   CR G VD A +L   M      P + T+ T+++GLCK  R+++A  + DEM  +
Sbjct: 195 TLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMARE 254

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P  V++N L++G CK G L  A  +   M  KG +P+ VT+ +LIH +C  GNL++A
Sbjct: 255 GLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERA 314

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           V+L+ +M       NE T+  +I+G  + G   D    +  M E +   +   Y+ LI+G
Sbjct: 315 VALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLING 374

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K G+ ++A +L  +M  KG KP+ V YS ++ G C++G  D A E+  +M+  G   +
Sbjct: 375 YCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPD 434

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
           A TYSSL++G  E  +   A E+++ M +     +E  Y+ LI G C++G +++A  +  
Sbjct: 435 AITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHD 494

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M+ +G  PDVV YS +I GL  +   +EA +L  ++   +P   PD   Y  L++  C+
Sbjct: 495 EMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDP--VPDNIKYEALMHC-CR 551

Query: 557 QSNISHSIDLLNSMMDRG 574
            +     + LL     +G
Sbjct: 552 TAEFKSVVALLKGFSMKG 569



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 234/465 (50%), Gaps = 19/465 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  +  +G+  + E ++  MR         +F  +     KA  +E+A ++F  M
Sbjct: 192 TYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM 251

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E      V S+N++++   + G  H AL  +  +       ++P+ +TF  +I  +CR
Sbjct: 252 AREGLTPDGV-SYNTLVSGYCKAGCLHEALAVFAEMAQK---GVVPDVVTFTSLIHAMCR 307

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A+ L  +M  R    + +T+  L+DG C+   LD+A+L + EM+     P+ V 
Sbjct: 308 AGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVC 367

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NVLING CK G +  A +L+  M  KG  P+ VTY+T++ G C  G+ D A  L  +M+
Sbjct: 368 YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML 427

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+ +TY ++I GL +  R  D   +   M +     +E+ Y+TLI G  KEG  +
Sbjct: 428 KKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQ 487

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+ L  +M++KG  P+ V YS LIDGL +  +  EA+ +LF++       +   Y +LM
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547

Query: 445 ---------------KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                          KGF   G  ++A ++++ M   +   +   YSVLIHG C  G + 
Sbjct: 548 HCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIM 607

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           +A     Q+L  G  P+  +  S++ GL   G   EA  +  E+L
Sbjct: 608 KALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 214/403 (53%), Gaps = 4/403 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ L +N V+  +    L  +A +L   M      P++YTY  L+  LC   + +EA+ +
Sbjct: 118 PSLLAYNAVLLALSDASL-PSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 250 L-DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           + D+M+  GC P  VT+N L+   C+ GE+  A +LV  M   G  P+ VT+NT+++GLC
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G ++ A  + D M      P+ V+Y T+++G  K G   +   V   M ++    +  
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            +++LI  + + G  E A+ L  QM E+G + N   ++ALIDG CR G  D+A   + EM
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
                  +   Y+ L+ G+ + G+  +A E+  +M       + V YS ++ G C+ G  
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  +ML +G  PD + YSS+I GLC    + +A +LF +ML L    QPD FTY 
Sbjct: 417 DSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQL--GLQPDEFTYT 474

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            L++  CK+ N+  ++ L + M+ +G  PD+VT ++ +  L +
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSK 517



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 197/402 (49%), Gaps = 27/402 (6%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P+ + +N ++  L  +  L  A +L+ +M   G  PN  TYN L+  LC +G  ++A
Sbjct: 115 GYAPSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 317 VSLL-DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           + ++ D M  + C PN VTY T++    + G      R++  M E     +   ++T+++
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL K G+ EDA K++ +M  +G  P+ V Y+ L+ G C+ G   EA  +  EM   G   
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  T++SL+     +G   +AV +   M +     NE  ++ LI G C +G L +A +  
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNAL 554
            +M     +P VV Y+ +I+G C  G ++EA +L +EM   E K  +PDV TY+ +L+  
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM---EAKGMKPDVVTYSTILSGY 410

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           CK  +   + +L   M+ +G  PD +T +  +  L E+                     +
Sbjct: 411 CKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE---------------------R 449

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           R     ++ E MLQ  L P   T+  ++   C+   +Q A++
Sbjct: 450 RLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALS 491



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 187/420 (44%), Gaps = 54/420 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++ +L+  Y  +G       V   M ++  V    +F  +  A  +A  +E A+ L   M
Sbjct: 262 SYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQM 321

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E   +    +F ++++   + G    AL     +   +   I P+ + +N++I   C+
Sbjct: 322 -RERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM---RECRIQPSVVCYNVLINGYCK 377

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           LG +D A +L  EM  +  +PD+ TY T++ G CK    D A  L  +M   G  P  +T
Sbjct: 378 LGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAIT 437

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LI GLC+   LG A +L + M   G  P+E TY TLI G C +GN+ KA+SL D M+
Sbjct: 438 YSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMI 497

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLM---------------------------- 356
               +P+ VTY  +I+GL K  R  +  R+L                             
Sbjct: 498 KKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKS 557

Query: 357 ----------------------SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
                                 SM +R + ++  +YS LI G  + G    A+   KQ++
Sbjct: 558 VVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLL 617

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
             G  PN+    +L+ GL   G   EA+ ++ E++N    A+A T  +L+    + G G+
Sbjct: 618 RCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDLNRKEGVGY 677


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 160/594 (26%), Positives = 271/594 (45%), Gaps = 70/594 (11%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
            +   F S     ++Q    T+  +I+      D   ++ +L +M+ E     E  FI +
Sbjct: 61  LASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINV 120

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
              Y +  L E+A+++F+  + EF C+ TVK +N +L+ ++ E  +      Y+   N K
Sbjct: 121 INTYRRVGLAEQALKMFYR-IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYS---NMK 176

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT------------ 232
                PN  T+N+++K +C+   VD A +L  EM  + CEPD+ +Y T            
Sbjct: 177 RDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVE 236

Query: 233 ------------------LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
                             L++G C+E ++ E  LLL +M   G  P  +T++ +I+ L  
Sbjct: 237 EARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSG 296

Query: 275 NGELGRAAKLVDNMFLKGCLPNE-----------------------------------VT 299
            G +  A  +   MF++GC PN                                    V 
Sbjct: 297 IGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVA 356

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTLIHGLC  G + +AVS+  +M  + C PN  TYG +I+G  K G  V  + +   M 
Sbjct: 357 YNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMM 416

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 N  +Y+++++ L +      A  L ++M    C PNTV ++  I GLC  G+ +
Sbjct: 417 TNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVE 476

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A  +  +M   GC+ N  TY+ ++ G  +  +  +A+E+  +M +     N V Y+ + 
Sbjct: 477 CAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIF 536

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G C  GK  EA  +  +ML  G KPD + Y+++ +  C  G V+ A++L ++ L    K
Sbjct: 537 GGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDK-LSAGGK 595

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             P+V  Y  LL  +C Q  +  ++  L+ M++ G   +  T N  +  L   L
Sbjct: 596 WVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSL 649



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 244/509 (47%), Gaps = 54/509 (10%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           V+ R+R E  +VL  ++   F++   +   +     +  M+++   +  V     +L  +
Sbjct: 49  VVMRLRTETDIVLASNY---FRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQM 105

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
             EG+      F N                   VI T  R+GL + A+++F  +    C+
Sbjct: 106 KLEGISCSEDLFIN-------------------VINTYRRVGLAEQALKMFYRIREFGCQ 146

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P +  Y  L+D +  ENR      +   M+ DG  P   T+N+L+  LCKN  +  A KL
Sbjct: 147 PTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKL 206

Query: 285 VDNMFLKGCLPNEVT------------------------------YNTLIHGLCLKGNLD 314
           +  M  KGC P+ V+                              YN LI+G C +  + 
Sbjct: 207 LVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVK 266

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +   LL +MV     PN +TY T+I+ L  +G       V   M  R    N Y +++L+
Sbjct: 267 EVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLM 326

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G F  G+  +A+ +W +M E+G +PN V Y+ LI GLC  GK  EA  +  +M  NGC+
Sbjct: 327 KGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCS 386

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  TY +L+ GF ++G    A EIW  M  N C+ N V Y+ +++ LC      +A  +
Sbjct: 387 PNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSL 446

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M +  C P+ V +++ I GLC +G VE A+ LF +M   +    P++ TYN +L+ L
Sbjct: 447 IEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQM--EQYGCSPNIKTYNEVLDGL 504

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            K++ I  +++L+  M ++G + +LVT N
Sbjct: 505 LKENRIKEALELVTEMEEKGMELNLVTYN 533



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 204/438 (46%), Gaps = 31/438 (7%)

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY  +++ L +E  +D    LL +M+++G   +   F  +IN   + G   +A K+   +
Sbjct: 81  TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              GC P    YN L+  +  +        +   M      PN  TY  ++  L K  R 
Sbjct: 141 REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR- 199

Query: 349 VDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           VDGA ++L+ M  +    +   Y+T+IS + K GK E+A +L  +      +PN  VY+A
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----QPNVSVYNA 254

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI+G CR  K  E   +L +M+  G   N  TYS+++      G    A+ +W  M    
Sbjct: 255 LINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRG 314

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  N   ++ L+ G    G++ EA  +W +M   G +P+VVAY+++IHGLC+ G + EA+
Sbjct: 315 CSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAV 374

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            + ++M        P+V TY  L++   K  ++  + ++ N MM  GC P++V       
Sbjct: 375 SVSSKME--RNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVY----- 427

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                       T  +N L     +    S  + ++E M      P T T+   ++ LC 
Sbjct: 428 ------------TSMVNVLC----RSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCC 471

Query: 648 PKRIQAAINK-CWSNLYG 664
             R++ AIN  C    YG
Sbjct: 472 SGRVECAINLFCQMEQYG 489



 Score = 47.0 bits (110), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 50/240 (20%), Positives = 96/240 (40%), Gaps = 51/240 (21%)

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG--CKPDVVAYSSMIHGLCNAGSVEEAL 527
           + ++ Y ++I  L  +  +   + +  QM   G  C  D+  + ++I+     G  E+AL
Sbjct: 77  HTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDL--FINVINTYRRVGLAEQAL 134

Query: 528 KLFNEMLCLEPKSQPDVFT-----------------------------------YNILLN 552
           K+F  +   E   QP V                                     YNILL 
Sbjct: 135 KMFYRIR--EFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLK 192

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAP-------QDGTDFL 603
           ALCK + +  +  LL  M ++GC+PD+V+    ++++ +  K+E         Q      
Sbjct: 193 ALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVY 252

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLY 663
           N L     +  +    F ++  M++K + P   T+  V+  L     ++ A+   W+ ++
Sbjct: 253 NALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELAL-AVWAKMF 311


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 176/593 (29%), Positives = 285/593 (48%), Gaps = 34/593 (5%)

Query: 67  DEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIF 123
           D  + S  ++G  Q  DS F  L     NS  F     VL +M R       +L+ S +F
Sbjct: 89  DFFYWSQSQMGVPQFLDS-FSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILD-SVLF 146

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
            F+ YG +  V     +F  ++D +     +    +V  V   + +    +   N + + 
Sbjct: 147 WFRNYGGSSPV-----VFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIR-CNSLRSM 200

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               ++PNT T+ ++   +CR   ++ A   F EM     +PD      L+DG  +E  +
Sbjct: 201 GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 260

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DE + + D M   G     +T+NVLI+GLCK G++ +AA+++  M   GC PN  T+  L
Sbjct: 261 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLL 320

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C + N+ +A+ LLD M     +P+ V+YG +INGL          ++L  M     
Sbjct: 321 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 380

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N  +YSTLI G   EG+ E+A +L   M   G  P+   Y+A+I  L + GK +EA  
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
            L E+   G   +A T+ + + G+ ++GK  +A + + +M  +  + N   Y+VLI+G  
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G L EA  ++  + + G  PDV   S+ IHGL   G V+EALK+F+E+   E    PD
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL--KEKGLVPD 558

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
           VFTY+ L++  CKQ  +  + +L + M  +G  P     NIF+                 
Sbjct: 559 VFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP-----NIFI----------------Y 597

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           N L   L K        K+ + M +K L P + T+  ++   C+ + +  A +
Sbjct: 598 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650



 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 158/570 (27%), Positives = 270/570 (47%), Gaps = 63/570 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I     +A  + EA   F  M  +   K    + +++++  ++EG     L   + 
Sbjct: 211 TYTIITAGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 269

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V+     I  N +T+N++I  +C+ G ++ A ++ + M    C+P+  T+C L++G C+
Sbjct: 270 MVSC---GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 326

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E+ +  A+ LLDEM+     P+ V++  +INGLC   +L  A KL++ M   G  PN V 
Sbjct: 327 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 386

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVAS-------------KCM----------------- 329
           Y+TLI G   +G +++A  LLD M  S              C+                 
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 446

Query: 330 -----PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ VT+G  I G  K G+  + A+    M +     N  +Y+ LI+G FK G   
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 506

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ +++ +   G  P+    SA I GL + G+  EA ++  E+   G   + FTYSSL+
Sbjct: 507 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 566

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            GF + G+  KA E+  +M       N   Y+ L+ GLC+ G ++ AR ++  M  +G +
Sbjct: 567 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 626

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD V YS+MI G C + +V EA  LF+EM       QP  F YN L++  CK+ ++  ++
Sbjct: 627 PDSVTYSTMIDGYCKSENVAEAFSLFHEM--PSKGVQPHSFVYNALVHGCCKEGDMEKAM 684

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
           +L   M+ +G          F T L              N L     K  +     ++ +
Sbjct: 685 NLFREMLQKG----------FATTLS------------FNTLIDGYCKSCKIQEASQLFQ 722

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            M+ K + P   T+  V+   C+  +++ A
Sbjct: 723 EMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 752



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 257/506 (50%), Gaps = 7/506 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +LI  YA+ G  +    +L  M           +  I     KA  +EEA   +   +
Sbjct: 387 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA-STYLLEI 445

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
                K    +F + +    + G    A ++++ +++     ++PN   + ++I    + 
Sbjct: 446 QGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDH---GLMPNNPLYTVLINGHFKA 502

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G +  A+ +FR +      PD+ T    + GL K  R+ EA+ +  E++  G  P   T+
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           + LI+G CK GE+ +A +L D M LKG  PN   YN L+ GLC  G++ +A  L D M  
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               P+ VTY T+I+G  K     +   +   M  +    + ++Y+ L+ G  KEG  E 
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 682

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           AM L+++M++KG    T+ ++ LIDG C+  K  EA ++  EMI      +  TY++++ 
Sbjct: 683 AMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 741

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
              ++GK  +A  ++K+M + N + + V Y+ L++G  + G+  E   ++ +M+++G KP
Sbjct: 742 WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 801

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           D V Y  +I+  C   ++ EA KL +E++     ++  +  +++L+ ALCK+ +++ +  
Sbjct: 802 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI--HDLLITALCKREDLTEASK 859

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKE 591
           LL+ M + G  P L  C+  + +  E
Sbjct: 860 LLDEMGELGLKPSLAACSTLVRSFHE 885



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 197/401 (49%), Gaps = 5/401 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA+++F  +  E      V +++S+++   ++G   +A E ++ +       I PN  
Sbjct: 540 VQEALKVFSEL-KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK---GIAPNIF 595

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N ++  +C+ G +  A +LF  MP +  EPD  TY T++DG CK   + EA  L  EM
Sbjct: 596 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P    +N L++G CK G++ +A  L   M  KG     +++NTLI G C    +
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKI 714

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L   M+A + MP+ VTY T+I+   K G+  +   +   M+ER   V+   Y++L
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 774

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + G  K G++ +   L+++M+ KG KP+ V Y  +I   C+     EA ++  E++  G 
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                 +  L+    +     +A ++  +M +     +    S L+    E GK+ EA  
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 894

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           V+  + S G  PD      +++G  N    E+A  L  +++
Sbjct: 895 VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 157/348 (45%), Gaps = 13/348 (3%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +L+     SGD +    +   M  +       ++  +   Y K+  V EA  LFH M 
Sbjct: 597 YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 656

Query: 146 DEFHCKRTVKSFNSVLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
                 + V+  + V N ++    +EG   +A+  +  ++          TL+FN +I  
Sbjct: 657 -----SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG----FATTLSFNTLIDG 707

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+   +  A QLF+EM  +   PD  TY T++D  CK  +++EA LL  EMQ       
Sbjct: 708 YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 767

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+  L+ G  K G+      L + M  KG  P+EVTY  +I+  C + NL +A  L D
Sbjct: 768 TVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRD 827

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            +V    +     +  +I  L K     + +++L  M E     +    STL+    + G
Sbjct: 828 EVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAG 887

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           K ++A ++++ +   G  P+T     L++G       ++A  ++ +++
Sbjct: 888 KMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 267/538 (49%), Gaps = 42/538 (7%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           ++ +++    SG F++   VL  M  +   +   +   +  A  +   V+EA+ L   + 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
             F C+  + S+N+VL  +     +    E  + +V    ++  PN +TFN +I  +CR 
Sbjct: 209 -FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV---RVDCAPNIVTFNTLIGYLCRN 264

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           GL +   ++  +M    C PDI  Y T++DG+CKE  L+ A  +L+ M   G  P  V +
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N ++ GLC       A +L+  MF K C  ++VT+N L+   C  G +D+ + LL++M++
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
             CMP+ +TY                                   +T+I+G  KEG  ++
Sbjct: 385 HGCMPDVITY-----------------------------------TTVINGFCKEGLIDE 409

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A+ L K M   GCKPNTV Y+ ++ GLC  G+  +AEE++ +MI  GC  N  T+++L+ 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
              + G   +A+E+ K M  N C  + + YS +I GL + GK  EA  +   M+++G  P
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           + + YSS+   L   G V + +++F+ +   +   + D   YN ++++LCK+     +ID
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIK--DTTIRSDAVLYNAVISSLCKRWETDRAID 587

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
               M+  GC P+  T  + +  L  +  A ++  + L+EL  R   R+     F IV
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLA-KEAQELLSELCSRGALRKHLMRHFGIV 644



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 247/487 (50%), Gaps = 23/487 (4%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +       A  + + PN  TF  V++ +C  G + +A+++  EM  + C P    
Sbjct: 89  YCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM 148

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  +++  C+      +V +L+ M   GC       N+++N +C+ G +  A  L+  + 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC  + V+YN ++ GLC+         L+D MV   C PN VT+ T+I  L + G   
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               VL  M E     +  +Y+T+I G+ KEG  E A ++  +M   G KPN V Y+ ++
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   +  EAEE+L EM    C  +  T++ L+  F ++G   + +E+ + M  + C+
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + + Y+ +I+G C++G + EA M+   M S GCKP+ V+Y+ ++ GLC+AG   +A +L
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++M  ++    P+  T+N L+N LCK+  +  +I+LL  M+  GC PDL++ +  +   
Sbjct: 449 MSQM--IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI--- 503

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                   DG          L K  +T    +++ VM+ K +SP T  +  +   L R  
Sbjct: 504 --------DG----------LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 650 RIQAAIN 656
           R+   I 
Sbjct: 546 RVNKVIQ 552



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 202/379 (53%), Gaps = 4/379 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI +   +G F+ +  VL +M         + +  I     K   +E A  + + M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
              +  K  V  +N+VL  +     +  A E  + +      +   + +TFN+++   C+
Sbjct: 313 -PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF---QKDCPLDDVTFNILVDFFCQ 368

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLVD  I+L  +M    C PD+ TY T+++G CKE  +DEAV+LL  M   GC P  V+
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + +++ GLC  G    A +L+  M  +GC PN VT+NTLI+ LC KG +++A+ LL +M+
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C P+ ++Y T+I+GL K G+  +   +L  M  +    N  IYS++   L +EG+  
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
             ++++  + +   + + V+Y+A+I  LC+  + D A +    M++NGC  N  TY+ L+
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608

Query: 445 KGFFESGKGHKAVEIWKDM 463
           KG    G   +A E+  ++
Sbjct: 609 KGLASEGLAKEAQELLSEL 627



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 31/212 (14%)

Query: 407 ALIDGLCRVGKPDEAEEILF------------EMINNGCAA-----------------NA 437
           ALI  LC  G+  EA   L              M+   C A                 NA
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           +T+  +++G    G+   A+E+  +M+   C      Y V++   C  G  R +  V   
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M ++GC  D    + +++ +C  G V+EA+ L  ++       + D+ +YN +L  LC  
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF--GCEADIVSYNAVLKGLCMA 229

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                  +L++ M+   C P++VT N  +  L
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 34/118 (28%)

Query: 507 VVAYSSM--------------------------------IHGLCNAGSVEEALKLFNEML 534
           VVAY++M                                + GLC  G + +AL++ +EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
                  P +  Y+++L A C+     +S+ +L +M  +GC  D   CN+ L A+ E+
Sbjct: 139 FKGCAPIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 267/538 (49%), Gaps = 42/538 (7%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           ++ +++    SG F++   VL  M  +   +   +   +  A  +   V+EA+ L   + 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
             F C+  + S+N+VL  +     +    E  + +V    ++  PN +TFN +I  +CR 
Sbjct: 209 -FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV---RVDCAPNIVTFNTLIGYLCRN 264

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           GL +   ++  +M    C PDI  Y T++DG+CKE  L+ A  +L+ M   G  P  V +
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N ++ GLC       A +L+  MF K C  ++VT+N L+   C  G +D+ + LL++M++
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
             CMP+ +TY                                   +T+I+G  KEG  ++
Sbjct: 385 HGCMPDVITY-----------------------------------TTVINGFCKEGLIDE 409

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A+ L K M   GCKPNTV Y+ ++ GLC  G+  +AEE++ +MI  GC  N  T+++L+ 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
              + G   +A+E+ K M  N C  + + YS +I GL + GK  EA  +   M+++G  P
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           + + YSS+   L   G V + +++F+ +   +   + D   YN ++++LCK+     +ID
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIK--DTTIRSDAVLYNAVISSLCKRWETDRAID 587

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
               M+  GC P+  T  + +  L  +  A ++  + L+EL  R   R+     F IV
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLA-KEAQELLSELCSRGALRKHLMRHFGIV 644



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 247/487 (50%), Gaps = 23/487 (4%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +       A  + + PN  TF  V++ +C  G + +A+++  EM  + C P    
Sbjct: 89  YCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM 148

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  +++  C+      +V +L+ M   GC       N+++N +C+ G +  A  L+  + 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC  + V+YN ++ GLC+         L+D MV   C PN VT+ T+I  L + G   
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               VL  M E     +  +Y+T+I G+ KEG  E A ++  +M   G KPN V Y+ ++
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   +  EAEE+L EM    C  +  T++ L+  F ++G   + +E+ + M  + C+
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + + Y+ +I+G C++G + EA M+   M S GCKP+ V+Y+ ++ GLC+AG   +A +L
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++M  ++    P+  T+N L+N LCK+  +  +I+LL  M+  GC PDL++ +  +   
Sbjct: 449 MSQM--IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI--- 503

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                   DG          L K  +T    +++ VM+ K +SP T  +  +   L R  
Sbjct: 504 --------DG----------LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 650 RIQAAIN 656
           R+   I 
Sbjct: 546 RVNKVIQ 552



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 202/379 (53%), Gaps = 4/379 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI +   +G F+ +  VL +M         + +  I     K   +E A  + + M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
              +  K  V  +N+VL  +     +  A E  + +      +   + +TFN+++   C+
Sbjct: 313 -PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF---QKDCPLDDVTFNILVDFFCQ 368

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLVD  I+L  +M    C PD+ TY T+++G CKE  +DEAV+LL  M   GC P  V+
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + +++ GLC  G    A +L+  M  +GC PN VT+NTLI+ LC KG +++A+ LL +M+
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C P+ ++Y T+I+GL K G+  +   +L  M  +    N  IYS++   L +EG+  
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
             ++++  + +   + + V+Y+A+I  LC+  + D A +    M++NGC  N  TY+ L+
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608

Query: 445 KGFFESGKGHKAVEIWKDM 463
           KG    G   +A E+  ++
Sbjct: 609 KGLASEGLAKEAQELLSEL 627



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 31/212 (14%)

Query: 407 ALIDGLCRVGKPDEAEEILF------------EMINNGCAA-----------------NA 437
           ALI  LC  G+  EA   L              M+   C A                 NA
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           +T+  +++G    G+   A+E+  +M+   C      Y V++   C  G  R +  V   
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M ++GC  D    + +++ +C  G V+EA+ L  ++       + D+ +YN +L  LC  
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF--GCEADIVSYNAVLKGLCMA 229

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                  +L++ M+   C P++VT N  +  L
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 34/118 (28%)

Query: 507 VVAYSSM--------------------------------IHGLCNAGSVEEALKLFNEML 534
           VVAY++M                                + GLC  G + +AL++ +EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
                  P +  Y+++L A C+     +S+ +L +M  +GC  D   CN+ L A+ E+
Sbjct: 139 FKGCAPIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 151/537 (28%), Positives = 262/537 (48%), Gaps = 27/537 (5%)

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII 165
            YRM R         F     ++ K       + L + M D F     V S N ++N + 
Sbjct: 76  FYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQM-DLFGVTHNVYSLNVLINCLC 134

Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP 225
           +      A+     +     + I P   TFN +I  +C  G +  A++LF EM  R  EP
Sbjct: 135 RLNHVDFAVSILGKMFK---LGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEP 191

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           ++ +Y T+++GLCK      AV +  +M+ +GC P  VT+N +I+ LCK+  +  A + +
Sbjct: 192 NVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFL 251

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M  +G  PN  TYN ++HG C+ G L++A  L   MV    MP+ VT   +++GL K 
Sbjct: 252 SEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKE 311

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           G   +   V  +M E+    N   Y+ L+ G   +    +A K+++ M+ +GC P    Y
Sbjct: 312 GMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSY 371

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + LI+G C+  + DEA+ +L EM +     +  TYS+LM+G  + G+  +A+ I+K+M  
Sbjct: 372 NILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCS 431

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
              + N V YS+L+ G C+ G L EA  +   M  +  +P++V ++ +I G+  AG +E 
Sbjct: 432 YGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEV 491

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A +LF+++       +P + TY +++  L K+     + DL   M D G  P+  + N+ 
Sbjct: 492 AKELFSKLFA--DGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVM 549

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           +                         + Q +S   ++++ M+ K  S   ST++ ++
Sbjct: 550 IQG---------------------FLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 144/514 (28%), Positives = 235/514 (45%), Gaps = 68/514 (13%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D+A+  F  M   N  P +  +   +    K+ +    V L ++M + G      + NV
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LIN LC+   +  A  ++  MF  G  P   T+N LI+GLC +G + +AV L + MV   
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN ++Y TIINGL K G       V   ME+     +   Y+T+I  L K+    DAM
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 388 KLWKQMMEKGCKPN-----------------------------------TVVYSALIDGL 412
           +   +M+++G  PN                                   TV  + L+DGL
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G   EA  +   M   G   N  TY++LM G+      ++A ++++ M +  C    
Sbjct: 309 CKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGV 368

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y++LI+G C+  ++ EA+ +  +M  +   PD V YS+++ GLC  G  +EAL +F E
Sbjct: 369 HSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKE 428

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--K 590
           M        P++ TY+ILL+  CK  ++  ++ LL SM ++  +P++V   I +  +   
Sbjct: 429 MCSY--GLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIA 486

Query: 591 EKLEAPQ--------DGT----------------DFLNELAIRLFKRQRTSGGFK---IV 623
            KLE  +        DG                 + L++ A  LF++    G        
Sbjct: 487 GKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSY 546

Query: 624 EVMLQKFLSPQ-TSTWERVVQELCRPKRIQAAIN 656
            VM+Q FL  Q +ST  R++ E+   KR  A ++
Sbjct: 547 NVMIQGFLQNQDSSTAIRLIDEMV-GKRFSANLS 579



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 175/361 (48%), Gaps = 20/361 (5%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           ++D A++   RMV     P+   +G  +    K  +      +   M+      N Y  +
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+ L +    + A+ +  +M + G  P    ++ALI+GLC  GK  EA E+  EM+  
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRR 187

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  +Y++++ G  ++G    AV+++K M +N C  + V Y+ +I  LC+D  + +A
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
               ++ML RG  P+V  Y+ M+HG C  G + EA +LF EM+  +    PD  T  IL+
Sbjct: 248 MEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD--VMPDTVTLTILV 305

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLE-------A 595
           + LCK+  +S +  +  +M ++G +P++ T N  +            K+  E       A
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           P  G    N L     K +R      ++  M  K L+P T T+  ++Q LC+  R + A+
Sbjct: 366 P--GVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEAL 423

Query: 656 N 656
           N
Sbjct: 424 N 424



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 140/281 (49%), Gaps = 4/281 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K  +V EA  +F TM ++   +  + ++N++++    + L + A + +  ++        
Sbjct: 310 KEGMVSEARLVFETMTEK-GVEPNISTYNALMDGYCLQRLMNEAKKVFEIMI---RQGCA 365

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P   ++N++I   C+   +D A  L  EM  +   PD  TY TLM GLC+  R  EA+ +
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNI 425

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM   G  P  VT+++L++G CK+G L  A KL+ +M  K   PN V +  LI G+ +
Sbjct: 426 FKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFI 485

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L+ A  L  ++ A    P   TY  +I GL+K G + +   +   ME+  F  N   
Sbjct: 486 AGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCS 545

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
           Y+ +I G  +   +  A++L  +M+ K    N   +  L+D
Sbjct: 546 YNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 230/432 (53%), Gaps = 3/432 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P  +TF  ++  +C    + +A++LF E+      P + TY T++ GLCK      
Sbjct: 135 LGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTN 194

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ LL +M+  GC P  V +N +I+ LCK+     A      M  +G  PN VTY++++H
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILH 254

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C  G L++A SL  +M+    MPN VT+  +++GL K G  ++  RV   M E     
Sbjct: 255 GFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEP 314

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + Y YS L+ G   + + ++A KL+  M+ KG  P+  VY+ LI+G C+  + +EA+ +L
Sbjct: 315 DAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLL 374

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM +     +  TYS+LM+GF ++G+   A +++K+M     + + + YS+L+ GLC+ 
Sbjct: 375 SEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKH 434

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L EA  +   M     +P +  Y+ +I G+CN G +E A +LF+ +       QP V 
Sbjct: 435 GHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFV--KGIQPSVV 492

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           TY ++++ L K+   + + ++   M+  GC P+  T N+ +       + P +    + E
Sbjct: 493 TYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGD-PSNAVRLIEE 551

Query: 606 LAIRLFKRQRTS 617
           +  R F    ++
Sbjct: 552 MVGRGFSADSST 563



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/414 (33%), Positives = 218/414 (52%), Gaps = 6/414 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR--LDEA 246
           LP  + FN ++ ++ +       I L ++M + N  P++YT   L++ LC  NR  +  A
Sbjct: 66  LPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFA 125

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
              L +M   G  PT VTF  L+NGLC   ++  A KL D +   G  P+ +TY T+I G
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC  G+   A+ LL +M    C P+ V Y T+I+ L K  RA +       M ++    N
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              YS+++ G    G+  +A  L+KQM+ +   PNTV ++ L+DGLC+ G   EA  +  
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFE 305

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            M  NG   +A+TYS+LM G+    +  +A +++  M       +   Y++LI+G C+  
Sbjct: 306 MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSR 365

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           +L EA+ + ++M  R   PD V YS+++ G C AG  + A KLF EM        PD  T
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY--GLLPDSIT 423

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQD 598
           Y+ILL+ LCK  ++  +  LL +M +   +P +   NI +  +    KLEA ++
Sbjct: 424 YSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARE 477



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/429 (31%), Positives = 212/429 (49%), Gaps = 23/429 (5%)

Query: 254 QVDGCFPTP--VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL-- 309
           Q+ G  P P  V FN L+  L K         L   M L    PN  T   LI+ LC   
Sbjct: 59  QLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSN 118

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           + ++  A S L +M      P  VT+GT++NGL    + +D  ++   + +  F  +   
Sbjct: 119 RDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLIT 178

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+T+I GL K G   +A++L K+M EKGCKP+ V Y+ +ID LC+  + +EA     EM+
Sbjct: 179 YTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMV 238

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   N  TYSS++ GF   G+ ++A  ++K M   N + N V +++L+ GLC++G + 
Sbjct: 239 DQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMIL 298

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EAR V+  M   G +PD   YS+++ G C    ++EA KLF+ M  +     P V  YNI
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM--VGKGFAPSVRVYNI 356

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE---- 605
           L+N  CK   ++ +  LL+ M DR   PD VT +  +    +    PQ       E    
Sbjct: 357 LINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQA-GRPQVAQKLFKEMCSY 415

Query: 606 -----------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      L   L K       F++++ M +  + P    +  ++Q +C   +++AA
Sbjct: 416 GLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAA 475

Query: 655 INKCWSNLY 663
             + +SNL+
Sbjct: 476 -RELFSNLF 483



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 201/395 (50%), Gaps = 4/395 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I K   K      A++L   M +E  CK  V ++N+V++ + ++   + A+ F++ 
Sbjct: 178 TYTTIIKGLCKIGHTTNALQLLKKM-EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSE 236

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V+     I PN +T++ ++   C LG ++ A  LF++M  RN  P+  T+  L+DGLCK
Sbjct: 237 MVDQ---GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCK 293

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E  + EA  + + M  +G  P   T++ L++G C   ++  A KL D M  KG  P+   
Sbjct: 294 EGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRV 353

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN LI+G C    L++A +LL  M      P+ VTY T++ G  + GR     ++   M 
Sbjct: 354 YNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMC 413

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 +   YS L+ GL K G  ++A +L K M E   +P+  +Y+ LI G+C  GK +
Sbjct: 414 SYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLE 473

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A E+   +   G   +  TY+ ++ G  + G  ++A E+++ M  N C+ N   Y+V I
Sbjct: 474 AARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAI 533

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            G   +G    A  +  +M+ RG   D   +  ++
Sbjct: 534 QGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/417 (32%), Positives = 227/417 (54%), Gaps = 6/417 (1%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           + +N ++   C  G +D A +L  EMPV   EPD YTY TL+ GLC   R   A+ +LDE
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M    C P  VT+ +L+   CK     +A KL+D M  KGC P+ VTYN +++G+C +G 
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +D A+  L  + +  C PN V+Y  ++ GL    R  D   ++  M ++    N   ++ 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LIS L ++G  E A+++ +Q+ + GC PN++ Y+ L+   C+  K D+A   L  M++ G
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C  +  +Y++L+     SG+   AVE+   +    C    + Y+ +I GL + GK +EA 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M+S+G +PD++ YS++  GLC    +E+A++ F ++   +   +P+   YN ++ 
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQ--DMGIRPNTVLYNAIIL 355

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            LCK+     +IDL   M+  GC P+  T  I +  L  +    ++  D L+EL  R
Sbjct: 356 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYE-GLIKEARDLLDELCSR 411



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 208/393 (52%), Gaps = 8/393 (2%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
            M + P+  T+N +I+ +C  G   NA+ +  EM  R C PD+ TY  L++  CK +   
Sbjct: 25  EMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYK 84

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +A+ LLDEM+  GC P  VT+NV++NG+C+ G +  A + + N+   GC PN V+YN ++
Sbjct: 85  QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 144

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLC     + A  L+  M    C PN VT+  +I+ L + G       VL  + +    
Sbjct: 145 KGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCT 204

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            N   Y+ L+    K+ K + AM     M+ +GC P+ V Y+ L+  LCR G+ D A E+
Sbjct: 205 PNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVEL 264

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L ++ + GCA    +Y++++ G  ++GK  +A+E+  +M       + + YS +  GLC 
Sbjct: 265 LHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCR 324

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQ 541
           + ++ +A   + ++   G +P+ V Y+++I GLC       A+ LF  M+   C+     
Sbjct: 325 EDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCM----- 379

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           P+  TY IL+  L  +  I  + DLL+ +  R 
Sbjct: 380 PNESTYTILIEGLAYEGLIKEARDLLDELCSRA 412



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/426 (30%), Positives = 205/426 (48%), Gaps = 26/426 (6%)

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
            Y  ++ G C   +LD A  L+ EM V+   P   T+N LI GLC  G    A  ++D M
Sbjct: 2   AYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             + C+P+ VTY  L+   C +    +A+ LLD M    C P+ VTY  ++NG+ + GR 
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            D    L ++       N   Y+ ++ GL    + EDA +L  +M +KGC PN V ++ L
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I  LCR G  + A E+L ++   GC  N+ +Y+ L+  F +  K  KA+     M    C
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + V Y+ L+  LC  G++  A  +  Q+  +GC P +++Y+++I GL  AG  +EAL+
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L NEM+      QPD+ TY+ +   LC++  I  +I     + D G  P+ V        
Sbjct: 299 LLNEMV--SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV-------- 348

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                          N + + L KR+ T     +   M+     P  ST+  +++ L   
Sbjct: 349 -------------LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYE 395

Query: 649 KRIQAA 654
             I+ A
Sbjct: 396 GLIKEA 401



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 210/379 (55%), Gaps = 4/379 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI+     G   +   VL  M R + V    ++  + +A  K    ++A++L   M
Sbjct: 34  TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 93

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D+  C   + ++N V+N I QEG    A+EF   + N       PNT+++N+V+K +C 
Sbjct: 94  RDK-GCTPDIVTYNVVVNGICQEGRVDDAIEF---LKNLPSYGCEPNTVSYNIVLKGLCT 149

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               ++A +L  EM  + C P++ T+  L+  LC++  ++ A+ +L+++   GC P  ++
Sbjct: 150 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLS 209

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++  CK  ++ +A   +D M  +GC P+ V+YNTL+  LC  G +D AV LL ++ 
Sbjct: 210 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 269

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C P  ++Y T+I+GL K G+  +   +L  M  +    +   YST+ +GL +E + E
Sbjct: 270 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 329

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA++ + ++ + G +PNTV+Y+A+I GLC+  +   A ++   MI NGC  N  TY+ L+
Sbjct: 330 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 389

Query: 445 KGFFESGKGHKAVEIWKDM 463
           +G    G   +A ++  ++
Sbjct: 390 EGLAYEGLIKEARDLLDEL 408



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 178/358 (49%), Gaps = 26/358 (7%)

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           + YN ++ G C  G LD A  L+  M      P+  TY T+I GL   GR  +   VL  
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M  R+   +   Y+ L+    K    + AMKL  +M +KGC P+ V Y+ +++G+C+ G+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            D+A E L  + + GC  N  +Y+ ++KG   + +   A E+  +M +  C  N V +++
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI  LC  G +  A  V  Q+   GC P+ ++Y+ ++H  C    +++A+   + M+   
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV--S 235

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               PD+ +YN LL ALC+   +  +++LL+ + D+GC P L++ N  +           
Sbjct: 236 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI----------- 284

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           DG          L K  +T    +++  M+ K L P   T+  +   LCR  RI+ AI
Sbjct: 285 DG----------LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 332


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 273/540 (50%), Gaps = 33/540 (6%)

Query: 106 LYRMRR--EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
            YRM R   +  V+E  F     ++ K       + L + M D F     V S N ++N 
Sbjct: 81  FYRMVRINPRPSVVE--FGKFLGSFAKKKQYSTVVSLCNQM-DLFRVTHNVYSLNILINC 137

Query: 164 IIQEGLYHRALEFYNHIVNAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
           + +  L H  ++F   ++     + I P+ +TFN +I  +C  G +  A++LF EM  R 
Sbjct: 138 LCR--LNH--VDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
            EP++ +Y T+++GLCK      AV +  +M+ +GC P  VT++ +I+ LCK+  +  A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           + +  M  +G  PN  TYN+++HG C  G L++A  L   MV    MPN VT+  +++GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K G   +   V  +M E+    +   Y+ L+ G   +    +A K+++ M+ KGC P  
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
             Y+ LI+G C+  + DEA+ +L EM +     +  TYS+LM+G  + G+  +A+ ++K+
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M       N V Y +L+ G C+ G L EA  +   M  +  +P++V Y+ +I G+  AG 
Sbjct: 434 MCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGK 493

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           +E A +LF+++      ++PD+ TY +++  L K+     + DL   M D G  P+  + 
Sbjct: 494 LEVAKELFSKL--FGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSY 551

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           N+ +                         + Q +S   ++++ M+ K  S   ST++ ++
Sbjct: 552 NVMIQG---------------------FLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 150/490 (30%), Positives = 250/490 (51%), Gaps = 32/490 (6%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           +N  P+ + F   + +  +       + L  +M +     ++Y+   L++ LC+ N +D 
Sbjct: 87  INPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDF 146

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           +V +L +M   G  P  +TFN LINGLC  G++  A +L + M  +G  PN ++Y T+I+
Sbjct: 147 SVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVIN 206

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  GN   AV +  +M  + C PN VTY TII+ L K     D    L  M ER    
Sbjct: 207 GLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPP 266

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N + Y++++ G    G+  +A +L+K+M+ +   PNTV ++ L+DGLC+ G   EA  + 
Sbjct: 267 NVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVF 326

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M   G   +  TY++LM G+      ++A ++++ M +  C      Y++LI+G C+ 
Sbjct: 327 ETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKS 386

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            ++ EA+ +  +M  +   PD V YS+++ GLC  G  +EAL LF EM    P   P++ 
Sbjct: 387 RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGP--HPNLV 444

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQ------ 597
           TY ILL+  CK  ++  ++ LL SM ++  +P++V   I +  +    KLE  +      
Sbjct: 445 TYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKL 504

Query: 598 --DGT----------------DFLNELAIRLFKRQRTSGGFK---IVEVMLQKFLSPQ-T 635
             DGT                + L++ A  LF++    G         VM+Q FL  Q +
Sbjct: 505 FGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDS 564

Query: 636 STWERVVQEL 645
           ST  R++ E+
Sbjct: 565 STAIRLIDEM 574



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 181/360 (50%), Gaps = 20/360 (5%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +D A++   RMV     P+ V +G  +    K  +      +   M+  +   N Y  + 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI+ L +    + ++ +  +M + G  P+ + ++ALI+GLC  GK  EA E+  EM+  G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  +Y++++ G  ++G    AV+++K M +N C  N V YS +I  LC+D  + +A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
              ++M+ RG  P+V  Y+S++HG CN G + EA +LF EM+  +    P+  T+ IL++
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD--VMPNTVTFTILVD 311

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLE-------AP 596
            LCK+  +S +  +  +M ++G +PD+ T N  +            K+  E       AP
Sbjct: 312 GLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAP 371

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             G    N L     K +R      ++  M  K L+P T T+  ++Q LC+  R + A+N
Sbjct: 372 --GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALN 429



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 4/326 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ S++  + N G       +   M     +    +F  +     K  +V EA  +F TM
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++   +  + ++N++++    + L + A + +  ++        P   ++N++I   C+
Sbjct: 330 TEK-GVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRK---GCAPGAHSYNILINGYCK 385

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A  L  EM  +   PD  TY TLM GLC+  R  EA+ L  EM   G  P  VT
Sbjct: 386 SRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVT 445

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + +L++G CK+G L  A KL+ +M  K   PN V Y  LI G+ + G L+ A  L  ++ 
Sbjct: 446 YVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLF 505

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+  TY  +I GL+K G + +   +   ME+  F  N   Y+ +I G  +   + 
Sbjct: 506 GDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSS 565

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALID 410
            A++L  +M+ K    N   +  L+D
Sbjct: 566 TAIRLIDEMVGKRFSVNLSTFQMLLD 591


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 242/485 (49%), Gaps = 46/485 (9%)

Query: 111 REKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY 170
           + + ++  + FI + + Y  A L+E+++     M +   C  T  ++NS+++  ++ G  
Sbjct: 47  KSRYILQPRIFIELARGYASAGLLEKSVEALKRM-EGHRCALTASAYNSLIDAFVKAGYT 105

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
            +                                      A+ ++R M      PD YT+
Sbjct: 106 QK--------------------------------------ALAVYRVMGQSGLRPDTYTF 127

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             LM+   K  R+D    L +EMQ   C P  +T+++LI+ +CK G + +A K+  +M  
Sbjct: 128 NVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKS 187

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +GC PN  TY ++I GL   G++DKA  L + M +   +   V Y ++I+GL + GRA  
Sbjct: 188 RGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADA 247

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
            A++   M  +    +   +++L+ GL   G+A +A +++++  + GC  +  +Y+ LID
Sbjct: 248 AAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLID 307

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
            LC+  + DEA EI  E+  +G   + +T+++LM G  +SG+ H A  +  DM +  C  
Sbjct: 308 TLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTP 367

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +   Y+ LI GL + G++ EA  +  +M S G +PDVV Y+++I   C  G +E+AL+LF
Sbjct: 368 DVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLF 427

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM----MDRGCDPDLVTCNIFL 586
            E   +  K   +  TYN +LN LC    +  +  L N M    +D   DPD VT    L
Sbjct: 428 EE---ISAKGFANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLL 484

Query: 587 TALKE 591
              ++
Sbjct: 485 NGARQ 489



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 182/394 (46%), Gaps = 23/394 (5%)

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
           P  F  L  G    G L ++ + +  M    C      YN+LI      G   KA+++  
Sbjct: 54  PRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYR 113

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M  S   P+  T+  ++N   K  R     ++   M+ +    N   YS LI  + K G
Sbjct: 114 VMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCG 173

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             E A+K++  M  +GC+PN   Y+++IDGL + G  D+A  +  EM + G  A    Y+
Sbjct: 174 GVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYN 233

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           SL+ G   SG+   A +++++M       + V ++ L++GL   G+  EAR ++ +    
Sbjct: 234 SLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDV 293

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC  DV  Y+ +I  LC +  ++EA ++F E+   E    PDV+T+N L++ LCK   I 
Sbjct: 294 GCALDVNLYNVLIDTLCKSKRLDEAWEIFGEL--EEDGLVPDVYTFNALMDGLCKSGRIH 351

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFK 621
            +  LL  M   GC PD+   N  +  L++     + G   L          +  S G++
Sbjct: 352 DAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLL----------EMQSLGYE 401

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                      P   T+  ++ E C+  RI+ A+
Sbjct: 402 -----------PDVVTYNTLIDESCKGGRIEDAL 424



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 157/365 (43%), Gaps = 23/365 (6%)

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G +P+     TL+  L +    ++A  +L  +  S+ +     +  +  G    G    
Sbjct: 13  RGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEK 72

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
               L  ME  +  +    Y++LI    K G  + A+ +++ M + G +P+T  ++ L++
Sbjct: 73  SVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMN 132

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
              +  + D   ++  EM N  C+ N  TYS L+    + G   KA++++ DM    C  
Sbjct: 133 AFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRP 192

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N   Y+ +I GL + G + +A  ++ +M S G     V Y+S+IHGL  +G  + A KLF
Sbjct: 193 NIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLF 252

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
            EM  L    QPD  T+  L+  L      S +  +     D GC  D+   N+ +    
Sbjct: 253 REM--LSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT-- 308

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                              L K +R    ++I   + +  L P   T+  ++  LC+  R
Sbjct: 309 -------------------LCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGR 349

Query: 651 IQAAI 655
           I  A 
Sbjct: 350 IHDAF 354


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 166/566 (29%), Positives = 267/566 (47%), Gaps = 69/566 (12%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDE--FHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           S+  + K +   +  EEA+ L H M D     C   + S+N+V+N    EG   +A   Y
Sbjct: 168 SYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKA---Y 224

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           N  ++     I PN +T+ +VI  +C+  +VD A  +F++M  +   P+I TY  L+ G 
Sbjct: 225 NLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGY 284

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
               +  E V +L EM   G  P   T+ +L++ LCK G+   A KL D+M  KG  P+ 
Sbjct: 285 LSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDV 344

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK---LGRAVDGARV 354
             Y  ++HG   KG L +  S LD MV +   PN   +  +     K   +G A+D   +
Sbjct: 345 SIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMD---I 401

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M ++    N   Y+TLI  L K G+ +DA   + QM+ +G  PN VV+++L+ GLC 
Sbjct: 402 FNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCT 461

Query: 415 VGKPDEAEEILFEMINNGCAANA-----------------------------------FT 439
           + K ++A E+ FEM+N G   N                                     +
Sbjct: 462 IDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIIS 521

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y++L++G    GK  +A ++   M       NE  Y+ L+HG C DG++ +A  V+ +ML
Sbjct: 522 YNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEML 581

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           S G  P VV Y++++HGL       EA +L+  M  +    Q  ++TYNI+LN L K + 
Sbjct: 582 SNGITPVVVTYNTILHGLFKTRRFSEAKELYLNM--ITSGKQWSIYTYNIILNGLSKNNC 639

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +  ++ +  S+  +    D++T NI + AL       +DG     E A+ LF     +G 
Sbjct: 640 VDEALKMFQSLCSKDLQVDIITFNIMIGAL------LKDGR---KEDAMNLFATISANG- 689

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQEL 645
                      L P  +T+  + + L
Sbjct: 690 -----------LVPDVTTYRLIAENL 704



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 141/466 (30%), Positives = 228/466 (48%), Gaps = 2/466 (0%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K    A  V EA+ +    + E  C   V S+N++L     E     ALE  + + + 
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +  +  PN +++N VI      G VD A  LF +M  +   P++ TY  ++DGLCK   +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A  +  +M   G  P  VT+  LI+G    G+     +++  M   G  P+  TY  L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +  LC KG   +A  L D M+     P+   YG I++G    G   +    L  M     
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N YI++ +     K+    +AM ++ +M ++G  PN V Y+ LID LC++G+ D+AE 
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
              +MIN G A N   ++SL+ G     K  KA E++ +M       N V ++ ++  LC
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
            +G++ +A+ +   M   G +PD+++Y+++I G C  G  +EA KL + ML +  K  P+
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLK--PN 553

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             TYN LL+  C+   I  +  +   M+  G  P +VT N  L  L
Sbjct: 554 ECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGL 599



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 269/587 (45%), Gaps = 76/587 (12%)

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCKR--TVKSFNSVLNVIIQEGLYHR- 172
           LE   I   +A   +  V++A++LF    DEF H  R  ++ +FN +L  +         
Sbjct: 14  LELERIIGARARAGSLSVDDALKLF----DEFLHHARPASIIAFNQLLAAVSSASRRGSS 69

Query: 173 -----ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF------------ 215
                 +  +N ++      + P+  T+++++   CR+G +++    F            
Sbjct: 70  STSELVVSCFNRMIRDCCSKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVND 129

Query: 216 -------------------------REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
                                    R M    C P++ +Y TL+ G C ENR +EA+ LL
Sbjct: 130 VVVVNRLLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELL 189

Query: 251 DEM---QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
             M   QV  C P  V++N +ING    G++ +A  L  +M  +G  PN VTY  +I GL
Sbjct: 190 HMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGL 249

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C    +D+A  +  +M+     PN VTY  +I+G + +G+  +  R+L  M       + 
Sbjct: 250 CKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDC 309

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + Y  L+  L K+GK  +A KL+  M+ KG KP+  +Y  ++ G    G   E    L  
Sbjct: 310 FTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDL 369

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M+ NG + N + ++ +   F +     +A++I+  M +     N V Y+ LI  LC+ G+
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + +A + + QM++ G  P++V ++S+++GLC     E+A +LF EM+       P+V  +
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMV--NQGIHPNVVFF 487

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           N ++  LC +  +  +  L++ M   G  PD+++ N  +            G   +    
Sbjct: 488 NTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIR-----------GHCLVG--- 533

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  +T    K++++ML   L P   T+  ++   CR  RI  A
Sbjct: 534 -------KTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDA 573



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 132/525 (25%), Positives = 259/525 (49%), Gaps = 11/525 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y + G +K +  +L  M          ++  +     K     EA +LF +M
Sbjct: 276 TYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSM 335

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIKTVC 203
           +     ++ +K   S+  +I+       AL   +  ++    N I PN   FN+V     
Sbjct: 336 I-----RKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFA 390

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +  ++  A+ +F +M  +   P++  Y TL+D LCK  R+D+A L  ++M  +G  P  V
Sbjct: 391 KKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIV 450

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            F  L+ GLC   +  +A +L   M  +G  PN V +NT++  LC +G + KA  L+D M
Sbjct: 451 VFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLM 510

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                 P+ ++Y  +I G   +G+  + +++L  M       NE  Y+TL+ G  ++G+ 
Sbjct: 511 ERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRI 570

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +DA  ++++M+  G  P  V Y+ ++ GL +  +  EA+E+   MI +G   + +TY+ +
Sbjct: 571 DDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNII 630

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  ++    +A+++++ +   +   + + ++++I  L +DG+  +A  ++  + + G 
Sbjct: 631 LNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGL 690

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PDV  Y  +   L   GS+EE   +F+EM   +    P+    N L+  L  + +IS +
Sbjct: 691 VPDVTTYRLIAENLIEEGSLEEFDGMFSEM--EKSGCAPNSLMLNFLVRRLLLRGDISRA 748

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQ--DGTDFLNE 605
              L+ + ++    +  T ++ ++   +E+ +A    +   FLNE
Sbjct: 749 GAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYHFLNE 793


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 158/563 (28%), Positives = 262/563 (46%), Gaps = 72/563 (12%)

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA-KHMNILPNTLTFNLVI 199
           F      F   R  +S + + +++I +      LE Y   + A K+  I  +   F ++I
Sbjct: 78  FFIWASNFKRFRAWESCDLITDLLINQN----GLELYCQTLEALKNGGIKVHNDAFFVLI 133

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           K   ++GL D A++ F  M   +C PD+YTY  ++D L ++N L  A+ +   M    C 
Sbjct: 134 KVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCL 193

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   TF++LI+GLCK+G +  A  L D M  +G LP+  TY  +I GLC    +D A  L
Sbjct: 194 PNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRL 253

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            D+M  S   P+ VT   ++NG   L R  +   +L   E+  + ++   YS LI GLF+
Sbjct: 254 FDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFR 313

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             + ED   L+++M+E   KP+  +Y+ ++ GL   GK  +A E+L EM  +G   +   
Sbjct: 314 AKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVC 373

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ L+KGF + G   +A  +  ++++++C  N   YS+LI G+C +G  R+A+ ++ +M 
Sbjct: 374 YNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEME 433

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM-------------------------- 533
             GC P  V ++S+I GLC  G +E+A  LF +M                          
Sbjct: 434 KLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQ 493

Query: 534 -----LC---------------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
                LC                +    P ++TYNIL+N  CK  N + +  L   M  +
Sbjct: 494 KMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFK 553

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           G  PD VT    +                       L + QR    +K+ + M +   +P
Sbjct: 554 GLSPDTVTYGTLING---------------------LLRFQREEDAYKVFDQMEKNGCTP 592

Query: 634 QTSTWERVVQELCRPKRIQAAIN 656
             + +  ++  +CR   +  A +
Sbjct: 593 DAAVYRTMMTWMCRRMELPRAFS 615



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 250/577 (43%), Gaps = 72/577 (12%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLF 141
           +TF  LI     SG+ K    +   M   +R +L  +F +  +     ++  V++A RLF
Sbjct: 197 ATFSILIDGLCKSGNVKDALHLFDEM--TQRGILPDAFTYCVVISGLCRSKRVDDAYRLF 254

Query: 142 HTM------------------------VDE-FHCKRTVKSFNSVLNV----IIQEGLYHR 172
             M                        VDE F   R  +    VL+V     +  GL+ R
Sbjct: 255 DKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLF-R 313

Query: 173 ALEFYNHIVNAKHM---NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           A  + +  +  + M   N+ P+   + +++K +   G V +A++L  EM      PD   
Sbjct: 314 AKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVC 373

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  L+ G C    L EA  L  E+    CFP   T+++LI+G+C+NG    A ++ + M 
Sbjct: 374 YNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEME 433

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM---------PNEV----TYG 336
             GC P+ VT+N+LI GLC  G L+KA  L  +M   +           P+ V    +  
Sbjct: 434 KLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQ 493

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++  L   G      R+LM + +       Y Y+ L++G  K G    A KL+++M  K
Sbjct: 494 KMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFK 553

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+TV Y  LI+GL R  + ++A ++  +M  NGC  +A  Y ++M       +  +A
Sbjct: 554 GLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRA 613

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
             +W    +N     +      I G  E  ++ +A     +M  +    D+  Y+  + G
Sbjct: 614 FSLWLKYLRNIRSQEDEAIKA-IEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIG 672

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC---------KQSNISHSIDLL 567
           LC    V EALK+F   L LE         Y +++   C         K+ ++  +ID+ 
Sbjct: 673 LCQTRRVGEALKIF---LILE--------EYKVVITPPCCVKLIYFLLKEGDLDRAIDVF 721

Query: 568 NSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQDGTDFL 603
              +++G        N  LT L + K E  +D   +L
Sbjct: 722 LYTIEKGYLLRRRVANRILTKLVRRKGEMGKDRAIYL 758



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 146/332 (43%), Gaps = 28/332 (8%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           + EIFN   KLG Y     TF SLI     +G  +   ++ Y+M      +     +F+ 
Sbjct: 425 AQEIFNEMEKLGCYP-SAVTFNSLIDGLCKTGQLEKAHLLFYKME-----IGRNPSLFLR 478

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
            + G +H+++ A                  S   ++  +   GL H+A      + ++  
Sbjct: 479 LSQGPSHVLDSA------------------SLQKMVEQLCDSGLIHKAYRILMQLADSGD 520

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
               P   T+N+++   C+LG  + A +LFREM  +   PD  TY TL++GL +  R ++
Sbjct: 521 A---PGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREED 577

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  + D+M+ +GC P    +  ++  +C+  EL RA  L    +L+     E      I 
Sbjct: 578 AYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLK-YLRNIRSQEDEAIKAIE 636

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G   K  ++KAV  L  M       +   Y   + GL +  R  +  ++ + +EE K  +
Sbjct: 637 GYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKVVI 696

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
                  LI  L KEG  + A+ ++   +EKG
Sbjct: 697 TPPCCVKLIYFLLKEGDLDRAIDVFLYTIEKG 728


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 172/591 (29%), Positives = 285/591 (48%), Gaps = 65/591 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   +     + +A+    TM   F       ++N++LN   ++G+   A      
Sbjct: 206 TFNLLVHTHCSKGTLADALSTLSTM-QGFGLSPDAVTYNTLLNAHCRKGMLGEARAL--- 261

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   K   + P   T+N ++    RLG +  A ++   M     EPD++TY  L  GLC+
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321

Query: 240 ENRLDEAVLLLDEMQ---------------VDGCF---------------------PTPV 263
             ++DEA  L DEM+                D CF                      T V
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T N++I GLCK+GEL  A   ++ M   G  P+ +TYNTLIH  C  GN+ KA +L+D M
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V      +  T  T++  L K  R  +   +L S  +R F  +E  Y T+++  FKE  +
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS 501

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E A++LW +M+EK   P+   Y+ LI GL R+G+  EA + L E++  G   +  TY+ +
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +  + + G    A +    M +N+   + V  + L++GLC +GKL +A  ++   + +G 
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISH 562
           K DV+ Y+++I  +C  G V+ AL  F +M   E +  QPD FTYN++L+AL +      
Sbjct: 622 KVDVITYNTLIQTMCKDGDVDTALHFFADM---EARGLQPDAFTYNVVLSALSEAGRTEE 678

Query: 563 SIDLLNSMMDRG------CDPDLVTCNI-------FLTALKEKLEAPQDGTDFLNELAIR 609
           + ++L+ + + G        P L   ++            +E +E PQD     +E   +
Sbjct: 679 AQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSA---SEAYTK 735

Query: 610 LFKRQRTSGGFK----IVEVMLQKFLSPQTSTWERVVQELC-RPKRIQAAI 655
           L     TSG FK    I++ M+QK +S  +ST+  +++ L  R KR+  A+
Sbjct: 736 LVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQKRLTHAV 786



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/537 (26%), Positives = 262/537 (48%), Gaps = 33/537 (6%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY--HRALEFYNHIVN 182
             AY +  L   A +L H++      + ++++ N+VL+ + +        +L+ +  IV 
Sbjct: 138 LSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVA 197

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
              + + PN  TFNL++ T C  G + +A+     M      PD  TY TL++  C++  
Sbjct: 198 ---LRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGM 254

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L EA  LL  M+ DG  PT  T+N L++   + G + +A K+V+ M   G  P+  TYN 
Sbjct: 255 LGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNV 314

Query: 303 LIHGLCLKGNLDKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           L  GLC  G +D+A  L D M      +P+ VTY T+ +   K   + D  R+L  M E+
Sbjct: 315 LAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREK 374

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
                   ++ +I GL K+G+ E A+    +M + G  P+ + Y+ LI   C+ G   +A
Sbjct: 375 GVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKA 434

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             ++ EM+  G   + FT ++++    +  +  +A  + +   +   + +EV Y  ++  
Sbjct: 435 YTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAA 494

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
             ++     A  +W +M+ +   P +  Y+++I GL   G ++EA+   NE+  +E    
Sbjct: 495 YFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNEL--MEKGLV 552

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDG 599
           PD  TYNI+++A CK+ ++ ++    N M++    PD+VTCN  +    L  KL+     
Sbjct: 553 PDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDK---- 608

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                  A++LF+     G  K V+V+          T+  ++Q +C+   +  A++
Sbjct: 609 -------ALKLFESWVEKG--KKVDVI----------TYNTLIQTMCKDGDVDTALH 646



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 174/364 (47%), Gaps = 24/364 (6%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN  T+N L+H  C KG L  A+S L  M      P+ VTY T++N   + G   +   +
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M++         Y+TL+S   + G  + A K+ + M   G +P+   Y+ L  GLC+
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321

Query: 415 VGKPDEAEEILFEMINNGCA-ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
            GK DEA  +  EM   G    +  TY++L    F+      A+ + ++M +       V
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            ++++I GLC+DG+L  A     +M   G  PDV+ Y+++IH  C AG++ +A  L +EM
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
           +    K   D FT N +L  LCK+     +  LL S   RG  PD V+    + A     
Sbjct: 442 VRRGLKL--DTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAY---- 495

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                            FK   +    ++ + M++K L+P  ST+  +++ L R  R++ 
Sbjct: 496 -----------------FKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKE 538

Query: 654 AINK 657
           AI+K
Sbjct: 539 AIDK 542



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 166/350 (47%), Gaps = 23/350 (6%)

Query: 87  YSLIQHYANSG---DFKSLEMVLYRMRREKR----------------VVLEKSFIFIFKA 127
           Y+L+      G   D  +L  VLY + +EKR                +  E S+  +  A
Sbjct: 435 YTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAA 494

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y K +  E A+RL+  M+ E     ++ ++N+++  + + G    A++  N ++      
Sbjct: 495 YFKEYNSEPALRLWDEMI-EKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEK---G 550

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           ++P+  T+N++I   C+ G ++NA Q   +M   + +PD+ T  TLM+GLC   +LD+A+
Sbjct: 551 LVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKAL 610

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L +     G     +T+N LI  +CK+G++  A     +M  +G  P+  TYN ++  L
Sbjct: 611 KLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSAL 670

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
              G  ++A ++L ++  S  +    +   +    V    +   A+      E       
Sbjct: 671 SEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSAS 730

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
             Y+ L++GL   G+ ++A  +  +MM+KG   ++  Y  L++GL +  K
Sbjct: 731 EAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQK 780


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 218/396 (55%), Gaps = 2/396 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT ++N++I ++CRLG V  A +L  +M  R+  PD+ +Y T++DG C    L +A+ L+
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+MQ+ G  P   T+N +I  LCK G+   A K++  M  +  +P+ V Y TLIHG    
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G++  A    D M++ K  P+ +TY T+I G  + G+ ++   +   M  R    +E  Y
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI    K G+  +A  L  +M++ G  PN V Y ALIDGLC+ G+ D A E+L EM  
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N   Y+S++ G  ++G   +A+++ K+M       + + Y+ +I   C  G + +
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +ML RG +P VV ++ +++G C  G +E+  +L   M  LE    PD  TYN L
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM--LEKGIVPDAITYNTL 614

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +   C +++++ +  +   M ++G  PD  T NI +
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/453 (30%), Positives = 218/453 (48%), Gaps = 6/453 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA RL   M D       V S+++V++     G   +AL+  +   + +   + PN  
Sbjct: 274 VKEAHRLLMQM-DFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD---DMQIKGLKPNRY 329

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +I  +C++G    A ++ REM  +   PD   Y TL+ G  K   +  A    DEM
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  +T+  LI G  + G++     L   M  +G  P+EVTY TLI   C  G +
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEM 449

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A SL + MV     PN VTYG +I+GL K G       +L  M ++   +N  IY+++
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ++G+ K G  E A+KL K+M   G  P+ + Y+ +ID  CR+G  D+A ++L EM++ G 
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                T++ LM GF   G       +   M +   V + + Y+ L+   C    +     
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M ++G  PD   Y+ +I G C A +++EA  L+ EM  +E    P V +YN L+  
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM--IEKGYVPTVTSYNALIKR 687

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             K+     + +L   M   G   D    N F+
Sbjct: 688 FYKKRKFXEARELFEEMRGHGLVADGEIYNFFV 720



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 211/478 (44%), Gaps = 86/478 (17%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVD--------------NMFLK-------------- 291
           P P+ F++    L + G L  A KL+D              N FL               
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 292 -----GCLPNEVTYNTLIH-----------------------------------GLCLKG 311
                G   N  +YN +I+                                   G C  G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            L KA+ L+D M      PN  TY +II  L K+G++ +  +VL  M  +K   +  +Y+
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           TLI G FK G    A K + +M+ K   P+ + Y+ LI G  + GK  E + +  EMI+ 
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  TY++L+  + ++G+   A  +  +M +     N V Y  LI GLC+ G+L  A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +  +M  +G + +V  Y+SM++G+C AG++E+A+KL  EM        PD  TY  ++
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV--AGIDPDAITYTTVI 545

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL-------- 603
           +A C+  +I  +  LL  M+DRG  P +VT N+ +      L   +DG   L        
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC-MLGMLEDGDRLLGWMLEKGI 604

Query: 604 -------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  N L  +   R   +   KI + M  + ++P ++T+  +++  C+ + ++ A
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEA 662



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 225/471 (47%), Gaps = 25/471 (5%)

Query: 71  NSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMR----REKRVVLEKSFIFIFK 126
           +STP + SY        ++I  Y + G+ K    ++  M+    +  R     S I +  
Sbjct: 288 SSTPDVVSYS-------TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTY-NSIILLLC 339

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKS---FNSVLNVIIQEGLYHRALEFYNHIVNA 183
             GK+   E+ +R       E   ++ +     + ++++   + G    A ++++ +++ 
Sbjct: 340 KIGKSFEAEKVLR-------EMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSK 392

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I P+ +T+  +I+   + G V     LF EM  R  +PD  TY TL+D  CK   +
Sbjct: 393 K---ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEM 449

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
             A  L +EM   G  P  VT+  LI+GLCK+GEL  A +L+D M  KG   N   YN++
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++G+C  GN+++A+ L+  M  +   P+ +TY T+I+   +LG      ++L  M +R  
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
                 ++ L++G    G  ED  +L   M+EKG  P+ + Y+ L+   C     +   +
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           I   M N G A ++ TY+ L+KG  ++    +A  ++K+M +   V     Y+ LI    
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           +  K  EAR ++ +M   G   D   Y+  +      G VE  L L +E +
Sbjct: 690 KKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAI 740



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 147/347 (42%), Gaps = 39/347 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LIQ +   G     + + + M        E ++  +   Y KA  +  A  L + M
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +      + ++ ++++ + + G    A E  + +   +   +  N   +N ++  +C+
Sbjct: 460 V-QMGMTPNIVTYGALIDGLCKHGELDTANELLDEM---RKKGLQLNVCIYNSMVNGICK 515

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ AI+L +EM V   +PD  TY T++D  C+   +D+A  LL EM   G  PT VT
Sbjct: 516 AGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL--------------------- 303
           FNVL+NG C  G L    +L+  M  KG +P+ +TYNTL                     
Sbjct: 576 FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635

Query: 304 --------------IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
                         I G C   NL +A  L   M+    +P   +Y  +I    K  +  
Sbjct: 636 NQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFX 695

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           +   +   M       +  IY+  +   ++EG  E  + L  + +EK
Sbjct: 696 EARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 153/537 (28%), Positives = 266/537 (49%), Gaps = 42/537 (7%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           ++ +++    SG F++   VL  M  +   +   +   +  A  +   V+EA+ L   + 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
             F C+  + S+N+VL  +     +    E  + +V    ++  PN +TFN +I  +CR 
Sbjct: 209 -FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMV---RVDCAPNIVTFNTLIGYLCRN 264

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           GL +   ++  +M    C PDI  Y T++DG+CKE  L+ A  +L+ M   G  P  V +
Sbjct: 265 GLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCY 324

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N ++ GLC       A +L+  MF K C  ++VT+N L+   C  G +D+ + LL++M++
Sbjct: 325 NTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLS 384

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
             CMP+ +TY                                   +T+I+G  KEG  ++
Sbjct: 385 HGCMPDVITY-----------------------------------TTVINGFCKEGLIDE 409

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A+ L K M   GCKPNTV Y+ ++ GLC  G+  +AEE++ +MI  GC  N  T+++L+ 
Sbjct: 410 AVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLIN 469

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
              + G   +A+E+ K M  N C  + + YS +I GL + GK  EA  +   M+++G  P
Sbjct: 470 FLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISP 529

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           + + YSS+   L   G V + +++F+ +   +   + D   YN ++++LCK+     +ID
Sbjct: 530 NTIIYSSIACALSREGRVNKVIQMFDNIK--DTTIRSDAVLYNAVISSLCKRWETDRAID 587

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
               M+  GC P+  T  + +  L  +  A ++  + L+EL  R   R+     F I
Sbjct: 588 FFAYMVSNGCMPNESTYTMLIKGLASEGLA-KEAQELLSELCSRGALRKHLMRHFGI 643



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 144/486 (29%), Positives = 247/486 (50%), Gaps = 23/486 (4%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +       A  + + PN  TF  V++ +C  G + +A+++  EM  + C P    
Sbjct: 89  YCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPM 148

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  +++  C+      +V +L+ M   GC       N+++N +C+ G +  A  L+  + 
Sbjct: 149 YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLA 208

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC  + V+YN ++ GLC+         L+D MV   C PN VT+ T+I  L + G   
Sbjct: 209 FFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFE 268

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               VL  M E     +  +Y+T+I G+ KEG  E A ++  +M   G KPN V Y+ ++
Sbjct: 269 RVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVL 328

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   +  EAEE+L EM    C  +  T++ L+  F ++G   + +E+ + M  + C+
Sbjct: 329 KGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCM 388

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + + Y+ +I+G C++G + EA M+   M S GCKP+ V+Y+ ++ GLC+AG   +A +L
Sbjct: 389 PDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEEL 448

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++M  ++    P+  T+N L+N LCK+  +  +I+LL  M+  GC PDL++ +  +   
Sbjct: 449 MSQM--IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI--- 503

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                   DG          L K  +T    +++ VM+ K +SP T  +  +   L R  
Sbjct: 504 --------DG----------LGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 650 RIQAAI 655
           R+   I
Sbjct: 546 RVNKVI 551



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 202/379 (53%), Gaps = 4/379 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI +   +G F+ +  VL +M         + +  I     K   +E A  + + M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
              +  K  V  +N+VL  +     +  A E  + +      +   + +TFN+++   C+
Sbjct: 313 -PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF---QKDCPLDDVTFNILVDFFCQ 368

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLVD  I+L  +M    C PD+ TY T+++G CKE  +DEAV+LL  M   GC P  V+
Sbjct: 369 NGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVS 428

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + +++ GLC  G    A +L+  M  +GC PN VT+NTLI+ LC KG +++A+ LL +M+
Sbjct: 429 YTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 488

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C P+ ++Y T+I+GL K G+  +   +L  M  +    N  IYS++   L +EG+  
Sbjct: 489 VNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVN 548

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
             ++++  + +   + + V+Y+A+I  LC+  + D A +    M++NGC  N  TY+ L+
Sbjct: 549 KVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLI 608

Query: 445 KGFFESGKGHKAVEIWKDM 463
           KG    G   +A E+  ++
Sbjct: 609 KGLASEGLAKEAQELLSEL 627



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 31/212 (14%)

Query: 407 ALIDGLCRVGKPDEAEEILF------------EMINNGCAA-----------------NA 437
           ALI  LC  G+  EA   L              M+   C A                 NA
Sbjct: 52  ALIRSLCSAGRTAEAARALADAGDAAGVVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNA 111

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           +T+  +++G    G+   A+E+  +M+   C      Y V++   C  G  R +  V   
Sbjct: 112 YTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEA 171

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M ++GC  D    + +++ +C  G V+EA+ L  ++       + D+ +YN +L  LC  
Sbjct: 172 MHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF--GCEADIVSYNAVLKGLCMA 229

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                  +L++ M+   C P++VT N  +  L
Sbjct: 230 KRWGDVEELMDEMVRVDCAPNIVTFNTLIGYL 261



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 34/118 (28%)

Query: 507 VVAYSSM--------------------------------IHGLCNAGSVEEALKLFNEML 534
           VVAY++M                                + GLC  G + +AL++ +EM 
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
                  P +  Y+++L A C+     +S+ +L +M  +GC  D   CN+ L A+ E+
Sbjct: 139 FKGCAPIPPM--YHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQ 194


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/396 (33%), Positives = 218/396 (55%), Gaps = 2/396 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT ++N++I ++CRLG V  A +L  +M  R+  PD+ +Y T++DG C    L +A+ L+
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+MQ+ G  P   T+N +I  LCK G+   A K++  M  +  +P+ V Y TLIHG    
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G++  A    D M++ K  P+ +TY T+I G  + G+ ++   +   M  R    +E  Y
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI    K G+  +A  L  +M++ G  PN V Y ALIDGLC+ G+ D A E+L EM  
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N   Y+S++ G  ++G   +A+++ K+M       + + Y+ +I   C  G + +
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +ML RG +P VV ++ +++G C  G +E+  +L   M  LE    PD  TYN L
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWM--LEKGIVPDAITYNTL 614

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +   C +++++ +  +   M ++G  PD  T NI +
Sbjct: 615 MKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILI 650



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 219/453 (48%), Gaps = 6/453 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA RL   M D       V S+++V++     G   +AL+  +   + +   + PN  
Sbjct: 274 VKEAHRLLMQM-DFRSSTPDVVSYSTVIDGYCHLGELKKALKLMD---DMQIKGLKPNRY 329

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +I  +C++G    A ++ REM  +   PD   Y TL+ G  K   +  A    DEM
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  +T+  LI G  + G++     L   M  +G  P+EVTY TLI   C  G +
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEM 449

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A SL + MV     PN VTYG +I+GL K G       +L  M ++   +N  IY+++
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ++G+ K G  E A+KL K+M   G  P+ + Y+ +ID  CR+G  D+A ++L EM++ G 
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                T++ LM GF   G       +   M +   V + + Y+ L+   C    +     
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M ++G  PD   Y+ +I G C A +++EA  L+ EM  +E    P V +YN L+  
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEM--IEKGYVPTVTSYNALIKR 687

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             K+  I  + +L   M   G   D    N F+
Sbjct: 688 FYKKKKILEARELFEEMRGHGLVADGEIYNFFV 720



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 211/478 (44%), Gaps = 86/478 (17%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVD--------------NMFLK-------------- 291
           P P+ F++    L + G L  A KL+D              N FL               
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIK 247

Query: 292 -----GCLPNEVTYNTLIH-----------------------------------GLCLKG 311
                G   N  +YN +I+                                   G C  G
Sbjct: 248 VFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLG 307

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            L KA+ L+D M      PN  TY +II  L K+G++ +  +VL  M  +K   +  +Y+
Sbjct: 308 ELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYT 367

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           TLI G FK G    A K + +M+ K   P+ + Y+ LI G  + GK  E + +  EMI+ 
Sbjct: 368 TLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISR 427

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  TY++L+  + ++G+   A  +  +M +     N V Y  LI GLC+ G+L  A
Sbjct: 428 GLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTA 487

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +  +M  +G + +V  Y+SM++G+C AG++E+A+KL  EM        PD  TY  ++
Sbjct: 488 NELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV--AGIDPDAITYTTVI 545

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL-------- 603
           +A C+  +I  +  LL  M+DRG  P +VT N+ +      L   +DG   L        
Sbjct: 546 DAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC-MLGMLEDGDRLLGWMLEKGI 604

Query: 604 -------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  N L  +   R   +   KI + M  + ++P ++T+  +++  C+ + ++ A
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEA 662



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 226/471 (47%), Gaps = 25/471 (5%)

Query: 71  NSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMR----REKRVVLEKSFIFIFK 126
           +STP + SY        ++I  Y + G+ K    ++  M+    +  R     S I +  
Sbjct: 288 SSTPDVVSYS-------TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTY-NSIILLLC 339

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKS---FNSVLNVIIQEGLYHRALEFYNHIVNA 183
             GK+   E+ +R       E   ++ +     + ++++   + G    A ++++ +++ 
Sbjct: 340 KIGKSFEAEKVLR-------EMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSK 392

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I P+ +T+  +I+   + G V     LF EM  R  +PD  TY TL+D  CK   +
Sbjct: 393 K---ISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEM 449

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
             A  L +EM   G  P  VT+  LI+GLCK+GEL  A +L+D M  KG   N   YN++
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++G+C  GN+++A+ L+  M  +   P+ +TY T+I+   +LG      ++L  M +R  
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
                 ++ L++G    G  ED  +L   M+EKG  P+ + Y+ L+   C     +   +
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           I   M N G A ++ TY+ L+KG  ++    +A  ++K+M +   V     Y+ LI    
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           +  K+ EAR ++ +M   G   D   Y+  +      G VE  L L +E +
Sbjct: 690 KKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAI 740



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/347 (24%), Positives = 148/347 (42%), Gaps = 39/347 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LIQ +   G     + + + M        E ++  +   Y KA  +  A  L + M
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +      + ++ ++++ + + G    A E  + +   +   +  N   +N ++  +C+
Sbjct: 460 V-QMGMTPNIVTYGALIDGLCKHGELDTANELLDEM---RKKGLQLNVCIYNSMVNGICK 515

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ AI+L +EM V   +PD  TY T++D  C+   +D+A  LL EM   G  PT VT
Sbjct: 516 AGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVT 575

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL--------------------- 303
           FNVL+NG C  G L    +L+  M  KG +P+ +TYNTL                     
Sbjct: 576 FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635

Query: 304 --------------IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
                         I G C   NL +A  L   M+    +P   +Y  +I    K  + +
Sbjct: 636 NQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKIL 695

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           +   +   M       +  IY+  +   ++EG  E  + L  + +EK
Sbjct: 696 EARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 157/490 (32%), Positives = 253/490 (51%), Gaps = 14/490 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF  +I      G+      +  RM+       VV   S I     YGK   +EE + L 
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLI---DGYGKCGELEE-VELL 256

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            + + +  C   V ++N+++N   + G   +A  ++  +   K + ++ N +T +  +  
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEM---KRLGVMANVVTLSTFVDA 313

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+ GLV  A++LF +M VR   P+ +TY +L+DG CK  RLD+A++LLDEM   G  P 
Sbjct: 314 FCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 373

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+ V+++GLCK G++  A  ++  M   G   NE+ Y TLIHG  +  N ++A+ LL+
Sbjct: 374 VVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLN 433

Query: 322 RMVASKCMPNEVT-YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            M  +K M  +V+ YGT+I GL K+ +  +   +L  M++     N  IY+T++   FK 
Sbjct: 434 EM-KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKA 492

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK  +A+ L  ++ + G +PN V Y ALIDGLC+ G   EA     +M   G   N   Y
Sbjct: 493 GKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVY 552

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++L+ GF + G   KAV +  +M       ++V Y+ LI G  + G L+ A  +  +M+ 
Sbjct: 553 TTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIE 612

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G + D+  Y+  I G CN   ++EA  + +EM  +     PD   YN L+    K  N+
Sbjct: 613 TGLQLDLYCYTCFISGFCNMNMMQEARGVLSEM--IGTGITPDKTAYNCLIRKYQKLGNM 670

Query: 561 SHSIDLLNSM 570
             +  L N M
Sbjct: 671 EEASSLQNEM 680



 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 163/514 (31%), Positives = 241/514 (46%), Gaps = 51/514 (9%)

Query: 114 RVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII---QEGLY 170
           R  L   F  +        L+++A+R     V +       ++ N +L  +    Q GL 
Sbjct: 129 RSALPSVFDTLLSLLADHGLLDDAVRAL-ARVRQLRVPPNTRTCNHILLRLARNRQGGLV 187

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
            R  E         H+   PN  TFN+VI  +C+ G +  A  LF  M    C PD+ TY
Sbjct: 188 RRLFE---------HLPA-PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTY 237

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN-------------------- 270
            +L+DG  K   L+E  LL+ EM+  GC    VT+N LIN                    
Sbjct: 238 NSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKR 297

Query: 271 ---------------GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
                            CK G +  A KL   M ++G +PNE TY +L+ G C  G LD 
Sbjct: 298 LGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDD 357

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+ LLD MV    +PN VTY  +++GL K G+      VL  ME      NE +Y+TLI 
Sbjct: 358 AIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIH 417

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G F    +E A+ L  +M  KG + +  +Y  LI GLC+V K DEA+ +L +M + G   
Sbjct: 418 GHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRP 477

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N   Y+++M  FF++GK  +AV +   +  +    N V Y  LI GLC+ G + EA   +
Sbjct: 478 NTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHF 537

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M   G  P+V  Y+++I G C  GS+ +A+ L NEM  ++     D   Y  L++   
Sbjct: 538 DKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEM--VDKGMSLDKVVYTSLIDGHM 595

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           KQ ++  +  L   M++ G   DL     F++  
Sbjct: 596 KQGDLQGAFALKAKMIETGLQLDLYCYTCFISGF 629



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 196/438 (44%), Gaps = 29/438 (6%)

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
           P R+  P ++   TL+  L     LD+AV  L  ++     P   T N ++  L +N   
Sbjct: 127 PHRSALPSVFD--TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARN--- 181

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
            R   LV  +F     PN  T+N +I  LC +G L +A +L  RM A  C P+ VTY ++
Sbjct: 182 -RQGGLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSL 240

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+G  K G   +   ++  M +     +   Y+ LI+   K G  E A   + +M   G 
Sbjct: 241 IDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGV 300

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
             N V  S  +D  C+ G   EA ++  +M   G   N FTY+SL+ G  ++G+   A+ 
Sbjct: 301 MANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIV 360

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +  +M     V N V Y+V++ GLC++GK+  A  V + M   G K + + Y+++IHG  
Sbjct: 361 LLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHF 420

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
              + E AL L NEM       + DV  Y  L+  LCK   +  +  LL+ M D G  P+
Sbjct: 421 MNKNSERALDLLNEM--KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPN 478

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
            V     + A                      FK  + S    ++  +    L P   T+
Sbjct: 479 TVIYTTIMDA---------------------FFKAGKESEAVALLHKIPDSGLQPNVVTY 517

Query: 639 ERVVQELCRPKRIQAAIN 656
             ++  LC+   I  AI+
Sbjct: 518 CALIDGLCKAGSIYEAIS 535


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 164/597 (27%), Positives = 289/597 (48%), Gaps = 27/597 (4%)

Query: 74  PKLGSYQLGDSTFYSL--IQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKA 131
           P L +Y +    F  L  I+H      F +  ++L    R   VV+ +    +      A
Sbjct: 88  PDLCTYSILTGCFCRLGRIEH-----GFAAFGLILKTGWRVNEVVINQ----LLNGLCDA 138

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
             V+EA+ +    + EF C   V S N++L  +  E     ALE  + +      N  PN
Sbjct: 139 KRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPN 198

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +T+N +I  +C+   VD A  + + M  +  + D+ TY T++DGLCK   +D A  +L 
Sbjct: 199 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQ 258

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            M   G  P  VT+N +I+GLCK   + RA  ++ +M  KG  P+ VTYNT+I GLC   
Sbjct: 259 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQ 318

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            +D+A  +L  M+     P+  TY  +I+G +  G   +  R L  M  R    +   YS
Sbjct: 319 AVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYS 378

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            L+  L K GK  +A K++  M+ KG KPN  +Y  L+ G    G   +  ++L  M+ N
Sbjct: 379 LLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVAN 438

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G + N + ++ ++  + +     +A+ I+  M+++    + V Y +LI  LC+ G++ +A
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
            + + QM++ G  P+ V ++S+++GLC     E+A +LF EM   +   +P+V  +N ++
Sbjct: 499 VLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM--WDQGVRPNVVFFNTIM 556

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIR 609
             LC +  +  +  L++SM   G  P++++ N  +    L  + +      D +  + ++
Sbjct: 557 CNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLK 616

Query: 610 ------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                         K  R    + +   ML+K ++P   T+  ++Q L   +R   A
Sbjct: 617 PDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEA 673



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 152/495 (30%), Positives = 238/495 (48%), Gaps = 36/495 (7%)

Query: 173 ALEFYNHIV-NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC----EPDI 227
           AL+ ++ ++ +A+  ++       N+V +  C     + A+ LF  M  R C     PD+
Sbjct: 33  ALKLFDELLPHARPASVRAFNHLLNVVARARCS-STSELAVSLFNRMA-RACSNKVRPDL 90

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK-LVD 286
            TY  L    C+  R++        +   G     V  N L+NGLC    +  A   L+ 
Sbjct: 91  CTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLR 150

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV---ASKCMPNEVTYGTIINGLV 343
            M   GC+PN V+ NTL+ GLC +  +++A+ LL  M       C PN VTY TII+GL 
Sbjct: 151 RMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLC 210

Query: 344 KLGRAVDGAR-VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
           K  +AVD A  VL  M ++   ++   YST+I GL K    + A  + + M++KG KP+ 
Sbjct: 211 K-AQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V Y+ +IDGLC+    D AE +L  MI+ G   +  TY++++ G  ++    +A  + + 
Sbjct: 270 VTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQH 329

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M   +   +   Y+ LIHG    G+ +E      +M +RG  PDVV YS ++  LC  G 
Sbjct: 330 MIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGK 389

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
             EA K+F  M+      +P+V  Y ILL+    +  I+   DLL+ M+  G  P+    
Sbjct: 390 CTEARKIFYCMI--RKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           NI L A  +K    +         A+ +F R            M Q  LSP   T+  ++
Sbjct: 448 NIVLCAYAKKAMIDE---------AMHIFSR------------MSQHGLSPDVVTYGILI 486

Query: 643 QELCRPKRIQAAINK 657
             LC+  R+  A+ K
Sbjct: 487 DALCKLGRVDDAVLK 501



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 226/466 (48%), Gaps = 6/466 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I     KA  V+ A  +   M+D+   K  V ++N++++ + +     RA     H+++ 
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDK-GVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDK 333

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
              ++ P+  T+N +I      G     ++   EM  R  +PD+ TY  L+D LCK  + 
Sbjct: 334 ---DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKC 390

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  +   M   G  P    + +L++G    G +     L+D M   G  PN   +N +
Sbjct: 391 TEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIV 450

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +     K  +D+A+ +  RM      P+ VTYG +I+ L KLGR  D       M     
Sbjct: 451 LCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGV 510

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N  ++++L+ GL    + E A +L+ +M ++G +PN V ++ ++  LC  G+   A+ 
Sbjct: 511 TPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQR 570

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++  M   G   N  +Y++L+ G   +G+  +A ++   M       + + Y  L+ G C
Sbjct: 571 LIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G++  A  ++ +ML +G  P  V YS+++ GL +     EA +L+  M  ++   Q D
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNM--IKSGQQWD 688

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           ++TYNI+LN LCK + +  +  +  S+  +   P+++T  I +  L
Sbjct: 689 IYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVL 734



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 234/478 (48%), Gaps = 10/478 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y ++G++K +   L  M          ++  +     K     EA ++F+ M
Sbjct: 341 TYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCM 400

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIKTVC 203
           +     ++ +K   ++  +++       A+     +++    N I PN   FN+V+    
Sbjct: 401 I-----RKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYA 455

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +  ++D A+ +F  M      PD+ TY  L+D LCK  R+D+AVL  ++M  DG  P  V
Sbjct: 456 KKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSV 515

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            FN L+ GLC      +A +L   M+ +G  PN V +NT++  LC +G +  A  L+D M
Sbjct: 516 VFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                 PN ++Y T+I G    GR  + A++L  M       +   Y TL+ G  K G+ 
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A  L+++M+ KG  P  V YS ++ GL    +  EA+E+   MI +G   + +TY+ +
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  ++    +A +I++ +   +   N + ++++I  L + G+ ++A  ++  + S G 
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNI 560
            P+VV Y  M+  +   G ++E   LF   L +E     PD    N ++ +L  +  I
Sbjct: 756 VPNVVTYCIMMKNIIQEGLLDEFDNLF---LAMEKSGCTPDSVMLNAIIRSLLGRGEI 810



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 131/514 (25%), Positives = 244/514 (47%), Gaps = 45/514 (8%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I     KA  V+ A  +   M+D+   K  ++++N +++  +  G +   +     +  A
Sbjct: 310 IIDGLCKAQAVDRADGVLQHMIDK-DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMY-A 367

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG------- 236
           + ++  P+ +T++L++  +C+ G    A ++F  M  +  +P++  Y  L+ G       
Sbjct: 368 RGLD--PDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAI 425

Query: 237 -------------------------LC---KENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
                                    LC   K+  +DEA+ +   M   G  P  VT+ +L
Sbjct: 426 ADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGIL 485

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+ LCK G +  A    + M   G  PN V +N+L++GLC     +KA  L   M     
Sbjct: 486 IDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGV 545

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            PN V + TI+  L   G+ +   R++ SME      N   Y+TLI G    G+ ++A +
Sbjct: 546 RPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQ 605

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L   M+  G KP+ + Y  L+ G C+ G+ D A  +  EM+  G    A TYS++++G F
Sbjct: 606 LLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLF 665

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            + +  +A E++ +M K+   ++   Y+++++GLC+   + EA  ++  + S+  +P+++
Sbjct: 666 HTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNII 725

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDL 566
            ++ MI  L   G  ++A+ LF  +    P     P+V TY I++  + ++  +    +L
Sbjct: 726 TFTIMIDVLFKGGRKKDAMDLFASI----PSHGLVPNVVTYCIMMKNIIQEGLLDEFDNL 781

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
             +M   GC PD V  N  + +L  + E  + G 
Sbjct: 782 FLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGA 815



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 146/313 (46%), Gaps = 4/313 (1%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A  LF  M D+   +  V  FN+++  +  EG    A    + +   + + + PN ++
Sbjct: 531 EKAEELFFEMWDQ-GVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM---ERVGVRPNVIS 586

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I   C  G  D A QL   M     +PD+ +Y TL+ G CK  R+D A  L  EM 
Sbjct: 587 YNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREML 646

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  VT++ ++ GL        A +L  NM   G   +  TYN +++GLC    +D
Sbjct: 647 RKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVD 706

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A  +   + +    PN +T+  +I+ L K GR  D   +  S+       N   Y  ++
Sbjct: 707 EAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMM 766

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             + +EG  ++   L+  M + GC P++V+ +A+I  L   G+   A   L ++     +
Sbjct: 767 KNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFS 826

Query: 435 ANAFTYSSLMKGF 447
             A T S L+  F
Sbjct: 827 LEASTTSLLISLF 839



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 121/279 (43%), Gaps = 39/279 (13%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A RL  +M +    +  V S+N+++      G    A +  + +V+   + + P+ ++++
Sbjct: 568 AQRLIDSM-ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS---VGLKPDLISYD 623

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEP------------------------------- 225
            +++  C+ G +DNA  LFREM  +   P                               
Sbjct: 624 TLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKS 683

Query: 226 ----DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
               DIYTY  +++GLCK N +DEA  +   +      P  +TF ++I+ L K G    A
Sbjct: 684 GQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDA 743

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
             L  ++   G +PN VTY  ++  +  +G LD+  +L   M  S C P+ V    II  
Sbjct: 744 MDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRS 803

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           L+  G  +     L  ++E  F +     S LIS   +E
Sbjct: 804 LLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSRE 842



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 49/224 (21%), Positives = 87/224 (38%), Gaps = 57/224 (25%)

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA---GSVEEALKLFNEML-CLEPKSQPD 543
           + +A  ++ ++L       V A++ +++ +  A    + E A+ LFN M      K +PD
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 544 VFTYNI-----------------------------------LLNALCKQSNISHSID-LL 567
           + TY+I                                   LLN LC    +  ++D LL
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149

Query: 568 NSMMDRGCDPDLVTCNIFLTAL------KEKLE----APQDGTD-------FLNELAIRL 610
             M + GC P++V+CN  L  L      +E LE      +DG           N +   L
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            K Q       +++ M+ K +     T+  ++  LC+ + +  A
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRA 253


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 254/522 (48%), Gaps = 42/522 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + +AY K   +E A ++   M  E  C   V ++N+++  + + G    A  +   
Sbjct: 245 TYSTLIEAYCKVRDLESAKKVVEEM-RETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKE 303

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   +   ++P+  T+  +I  +C+ G  D A  L  EM      P++  Y TL+DG  +
Sbjct: 304 M---EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMR 360

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM----------- 288
           +   DEA  ++ EM   G  P  +T++ LI GLCK G +GRA++++  M           
Sbjct: 361 QGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMT 420

Query: 289 -----------------FL-------KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
                            FL        G  PN  TY+ +I+GLC  G  ++A  LL++M+
Sbjct: 421 YNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMI 480

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A    PN   Y  +I+G  + G        L  M       + Y Y++LI GL   GK +
Sbjct: 481 ADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMD 540

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A++ + +M+EKG +PN   Y  LI G    G  ++AE++L +M+N+G   N F Y+ ++
Sbjct: 541 EAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQIL 600

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +G+F+S    K     K M +   + +   Y ++IH L   G ++ A  V + +   G  
Sbjct: 601 EGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLV 660

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD + Y S+I G C A  +E+A+ L +EM   +   +P +  YN L++  CK  +ISH+ 
Sbjct: 661 PDSLIYGSLISGFCKAADMEKAVGLLDEM--AKKGIEPGISCYNALIDGFCKSDDISHAR 718

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           ++ NS++ +G  P+ VT    +    +  +  +D  D  NE+
Sbjct: 719 NIFNSIICKGLPPNCVTYTTLIDGYCKAGDI-RDAIDLYNEM 759



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 134/392 (34%), Positives = 213/392 (54%), Gaps = 2/392 (0%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I P+  T++ +I+  C++  +++A ++  EM    C  ++ TY TL+ GLC+   ++EA
Sbjct: 238 GISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEA 297

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
                EM+  G  P   T+  +INGLCK G   +A  L+D M   G +PN V Y+TLI G
Sbjct: 298 FGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
              +GN D+A  ++  M A+   PN++TY  +I GL KLGR    +R+L  M +  +  +
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+ +I G  ++   E+A  L  +M + G  PN   YS +I+GLC++G+ + A  +L 
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +MI +G   NAF Y+ L+ G+   G    A E  K M + N   +  CY+ LI GL   G
Sbjct: 478 QMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVG 537

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ EA   + +ML +G +P+   Y  +IHG   AG++E+A +L ++M  L     P+ F 
Sbjct: 538 KMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQM--LNSGLNPNDFI 595

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           Y  +L    K  N+      L SM+++G  PD
Sbjct: 596 YAQILEGYFKSDNLEKVSSTLKSMLEKGLMPD 627



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 150/575 (26%), Positives = 255/575 (44%), Gaps = 45/575 (7%)

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           VV+  + I  F   G A   +EA ++   M      +    ++++++  + + G   RA 
Sbjct: 348 VVVYSTLIDGFMRQGNA---DEAFKIVKEM-SAAGVQPNKITYDNLIRGLCKLGRMGRAS 403

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
                +    +M    +T+T+NLVI+   R    + A  L  EM      P++YTY  ++
Sbjct: 404 RILKQMTKIGYM---ADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIII 460

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +GLC+    + A  LL++M  DG  P    +  LI+G C+ G    A + +  M  +   
Sbjct: 461 NGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLT 520

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+   YN+LI GL   G +D+A+   D M+     PN+ TYG +I+G    G      ++
Sbjct: 521 PDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQL 580

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M     + N++IY+ ++ G FK    E      K M+EKG  P+  +Y  +I  L  
Sbjct: 581 LHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSS 640

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G    A  +L  +  NG   ++  Y SL+ GF ++    KAV +  +MAK        C
Sbjct: 641 SGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISC 700

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ LI G C+   +  AR ++  ++ +G  P+ V Y+++I G C AG + +A+ L+NEM 
Sbjct: 701 YNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEM- 759

Query: 535 CLEPKSQPDVFTY----------------------------------NILLNALCKQSNI 560
            L     PD F Y                                  N L++  CK+  +
Sbjct: 760 -LTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKL 818

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             ++  L+ MMD+   P L+T    +  L E  +  +  T F+ EL  +    + T    
Sbjct: 819 QETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFV-ELQQKNASHRDTDHLS 877

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +   M+ + L P       ++Q  C+   +  A+
Sbjct: 878 SLFTDMINQGLVP-LDVIHNMIQSHCKQGYLDKAL 911



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 156/317 (49%), Gaps = 2/317 (0%)

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
           PV  +VL++   K G +   A++V  M   G  P+    N L+  L     LD    +  
Sbjct: 173 PVVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRG 232

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M  +   P+  TY T+I    K+       +V+  M E    +N   Y+TLI GL + G
Sbjct: 233 FMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAG 292

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             E+A    K+M + G  P+   Y A+I+GLC+ G+PD+A+ +L EM   G   N   YS
Sbjct: 293 AIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYS 352

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ GF   G   +A +I K+M+      N++ Y  LI GLC+ G++  A  +  QM   
Sbjct: 353 TLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKI 412

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G   D + Y+ +I G     + EEA  L NEM   +    P+V+TY+I++N LC+     
Sbjct: 413 GYMADTMTYNLVIEGHLRQHNKEEAFLLLNEM--RKGGISPNVYTYSIIINGLCQIGESE 470

Query: 562 HSIDLLNSMMDRGCDPD 578
            +  LL  M+  G  P+
Sbjct: 471 RASGLLEQMIADGLKPN 487



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 182/399 (45%), Gaps = 27/399 (6%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +NS++  +   G    A+E+Y+ ++        PN  T+  +I      G ++ A QL  
Sbjct: 526 YNSLIIGLSNVGKMDEAIEYYDEMLEK---GFQPNDFTYGGLIHGYSMAGNLEKAEQLLH 582

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M      P+ + Y  +++G  K + L++    L  M   G  P    + ++I+ L  +G
Sbjct: 583 QMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSG 642

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            +  A  ++  +   G +P+ + Y +LI G C   +++KAV LLD M      P    Y 
Sbjct: 643 HMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYN 702

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +I+G  K         +  S+  +    N   Y+TLI G  K G   DA+ L+ +M+ +
Sbjct: 703 ALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTE 762

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+  VYS L  G    G   +A  I  EMI  G A  + ++++L+ GF + GK  + 
Sbjct: 763 GVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIIS-SFNTLVHGFCKRGKLQET 821

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV--------------------WT 496
           V+    M   + V + +    ++ GL E GKL EA  +                    +T
Sbjct: 822 VKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFT 881

Query: 497 QMLSRGCKP-DVVAYSSMIHGLCNAGSVEEALKLFNEML 534
            M+++G  P DV+   +MI   C  G +++AL L + ++
Sbjct: 882 DMINQGLVPLDVI--HNMIQSHCKQGYLDKALMLHDALV 918


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 143/467 (30%), Positives = 244/467 (52%), Gaps = 14/467 (2%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R   ++  +L   +    ++ AL+ +  +V   H   LP+ + F  ++  + ++   D  
Sbjct: 45  RAFSNYRKILRNGLHNLQFNEALDLFTRMV---HSRPLPSIVDFTRLLSVIAKMKRFDVV 101

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           I LF +M +    P +YT   +M+ +C+ ++   A   L +M   G  P  VTF  L++G
Sbjct: 102 ISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHG 161

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            C    +  A  L D +   G  PN VTY TLIH LC   +L+ AV + ++M  +   PN
Sbjct: 162 FCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPN 221

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY ++++GL ++GR  D A +L  M +R    N   ++ LI    K GK  +A +L+K
Sbjct: 222 VVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYK 281

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M++    P+   Y+ALI+GLC  G+ DEA ++ + M +NG   N  TY++L+ GF +S 
Sbjct: 282 VMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSK 341

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +     +I+ +M++   V N + Y+VLI G C  G+   A+ V+ QM SR   PD+  Y+
Sbjct: 342 RVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYN 401

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            ++ GLC  G VE+AL +F  M   + +   ++ TY I++  +CK   +  + DL  S+ 
Sbjct: 402 VLLDGLCYNGYVEKALMIFKYM--RKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLF 459

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            +G  P+++T    ++    +         F++E A  LFK+ +  G
Sbjct: 460 SKGMKPNVITYTTMISGFCRR--------GFIHE-ADALFKKMKEDG 497



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 227/445 (51%), Gaps = 10/445 (2%)

Query: 136 EAIRLFHTMVDEFHCKR--TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           EA+ LF  MV   H +   ++  F  +L+VI +   +   +  +  +   + + I P   
Sbjct: 65  EALDLFTRMV---HSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQM---QILGISPVLY 118

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N+V+  VCR      A     +M     EPD+ T+ +L+ G C  NR+++A+ L D++
Sbjct: 119 TCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQI 178

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  VT+  LI+ LCKN  L  A ++ + M   G  PN VTYN+L+ GLC  G  
Sbjct: 179 VGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRW 238

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A  LL  M+     PN +T+  +I+  VK+G+ ++   +   M +   + + + Y+ L
Sbjct: 239 SDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+GL   G+ ++A +++  M   G  PN V Y+ LI G C+  + ++  +I +EM   G 
Sbjct: 299 INGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL 358

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
            AN  TY+ L++G+   G+   A E++  M       +   Y+VL+ GLC +G + +A M
Sbjct: 359 VANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALM 418

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  M  R    ++V Y+ +I G+C  G VE+A  LF  +       +P+V TY  +++ 
Sbjct: 419 IFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLF--SKGMKPNVITYTTMISG 476

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPD 578
            C++  I  +  L   M + G  P+
Sbjct: 477 FCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 176/353 (49%), Gaps = 4/353 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   +   + +E+A+ LF  +V     +  V ++ ++++ + +    + A+E +N 
Sbjct: 154 TFTSLLHGFCHWNRIEDALALFDQIVG-MGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQ 212

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + +     I PN +T+N ++  +C +G   +A  L R+M  R  +P++ T+  L+D   K
Sbjct: 213 MGDN---GIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVK 269

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             ++ EA  L   M     +P   T+  LINGLC  G L  A ++   M   G  PNEVT
Sbjct: 270 VGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVT 329

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y TLIHG C    ++    +   M     + N +TY  +I G   +GR      V   M 
Sbjct: 330 YTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMG 389

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            R+   +   Y+ L+ GL   G  E A+ ++K M ++    N V Y+ +I G+C+VGK +
Sbjct: 390 SRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVE 449

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           +A ++   + + G   N  TY++++ GF   G  H+A  ++K M ++  + NE
Sbjct: 450 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNE 502



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 125/251 (49%), Gaps = 3/251 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +F ++++  ++ G    A E Y  ++    M++ P+  T+  +I  +C  G +D A Q
Sbjct: 257 VITFTALIDAFVKVGKIMEAKELYKVMI---QMSVYPDVFTYTALINGLCTYGRLDEARQ 313

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F  M      P+  TY TL+ G CK  R+++   +  EM   G     +T+ VLI G C
Sbjct: 314 MFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYC 373

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G    A ++ + M  +   P+  TYN L+ GLC  G ++KA+ +   M   +   N V
Sbjct: 374 LVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIV 433

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  II G+ K+G+  D   +  S+  +    N   Y+T+ISG  + G   +A  L+K+M
Sbjct: 434 TYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKM 493

Query: 394 MEKGCKPNTVV 404
            E G  PN  V
Sbjct: 494 KEDGFLPNESV 504



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/270 (24%), Positives = 128/270 (47%), Gaps = 23/270 (8%)

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ L+ +M+     P+ V ++ L+  + ++ + D    +  +M   G +   +T + +M
Sbjct: 65  EALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVM 124

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
                S +  +A      M K     + V ++ L+HG C   ++ +A  ++ Q++  G +
Sbjct: 125 NCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFR 184

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P+VV Y+++IH LC    +  A+++FN+M   +   +P+V TYN L++ LC+    S + 
Sbjct: 185 PNVVTYTTLIHCLCKNRHLNHAVEIFNQMG--DNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
            LL  MM RG  P+++T     TAL +                    K  +     ++ +
Sbjct: 243 WLLRDMMKRGIQPNVIT----FTALIDAF-----------------VKVGKIMEAKELYK 281

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           VM+Q  + P   T+  ++  LC   R+  A
Sbjct: 282 VMIQMSVYPDVFTYTALINGLCTYGRLDEA 311


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/460 (30%), Positives = 235/460 (51%), Gaps = 37/460 (8%)

Query: 163 VIIQEGLYHRALEF--YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           V   +G   RA  F  Y  +V+     + P T TF +  + +CRLG  D A+ L R M  
Sbjct: 130 VSASQGGLPRARRFALYRRMVHRD--RVPPTTFTFGVAARALCRLGRADEALALLRGMAR 187

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
             C PD   Y T++  LC +  + EA  LL+EM + GC     TF+ ++ G+C  G +  
Sbjct: 188 HGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVRE 247

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLC-------------------------------L 309
           AA+LVD M  KGC+P  +TY  L+ GLC                                
Sbjct: 248 AARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLA 307

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G L +A  L + M    C P+  TY  +++GL KLGR     R+L  ME++ F  N   
Sbjct: 308 EGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVT 367

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ ++    K G  +D   L ++M  KG   N+  Y+ +I  LC+ G+ DEA  ++ EM 
Sbjct: 368 YTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMR 427

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + GC  +  +Y++++     + +  +A  +++++ +   V N + Y+ +IH L  DG+ +
Sbjct: 428 SQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQ 487

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  +  +M+  GC  DVV+Y+ +I  +C  G+V+ +L L  EM   E   +P+  +YNI
Sbjct: 488 DAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM--AEKGIKPNNVSYNI 545

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           L++ LCK+  +  +++L   M+++G  PD+VT N  +  L
Sbjct: 546 LISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGL 585



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 151/499 (30%), Positives = 247/499 (49%), Gaps = 18/499 (3%)

Query: 94  ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHL--VEEAIRLFHTMVDEFHCK 151
           +  G  ++    LYR    +  V   +F F   A     L   +EA+ L   M     C 
Sbjct: 133 SQGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMA-RHGCV 191

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
                + +V++ +  +G    A    N ++    M    +  TF+ V++ +C LG V  A
Sbjct: 192 PDAVLYQTVIHALCDQGGVTEAATLLNEML---LMGCAADVNTFDDVVRGMCGLGRVREA 248

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD---EMQVDGCFPTPVTFNVL 268
            +L   M  + C P + TY  L+ GLC+  + DEA  +L    E+ V       V FN +
Sbjct: 249 ARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNV-------VLFNTV 301

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I G    G+L  A +L + M LKGC P+  TY+ L+HGLC  G +  AV LL  M     
Sbjct: 302 IGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGF 361

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            PN VTY  +++   K G   D   +L  M  +   +N   Y+ +I  L K+G+ ++AM 
Sbjct: 362 APNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMG 421

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L ++M  +GC P+   Y+ +I  LC   + +EAE +   ++  G  AN  TY++++    
Sbjct: 422 LIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALL 481

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             G+   AV + K+M  + C  + V Y+ LI  +C+DG +  + ++  +M  +G KP+ V
Sbjct: 482 RDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNV 541

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +Y+ +I  LC    V +AL+L  +ML       PD+ TYN L+N LCK   +  +++LL 
Sbjct: 542 SYNILISELCKERRVRDALELSKQML--NQGLAPDIVTYNTLINGLCKMGWMHAALNLLE 599

Query: 569 SMMDRGCDPDLVTCNIFLT 587
            + +    PD++T NI ++
Sbjct: 600 KLHNENVHPDIITYNILIS 618



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 177/344 (51%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N + FN VI      G +  A +L+  M ++ C+PD +TY  LM GLCK  R+  AV LL
Sbjct: 294 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 353

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+  G  P  VT+ ++++  CKNG       L++ M  KG   N   YN +I+ LC  
Sbjct: 354 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKD 413

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D+A+ L+  M +  C P+  +Y TII  L    +  +   +  ++ E     N   Y
Sbjct: 414 GRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITY 473

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +T+I  L ++G+ +DA++L K+M+  GC  + V Y+ LI  +C+ G  D +  +L EM  
Sbjct: 474 NTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAE 533

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N  +Y+ L+    +  +   A+E+ K M       + V Y+ LI+GLC+ G +  
Sbjct: 534 KGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHA 593

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           A  +  ++ +    PD++ Y+ +I   C    +++A  L N  +
Sbjct: 594 ALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 637


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 145/534 (27%), Positives = 259/534 (48%), Gaps = 27/534 (5%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  + + Y +A  + E    F  +  +  C  ++ + NS+L  +++ G    A E Y  +
Sbjct: 30  FDLLVRTYVQARKLREGCEAFRVLKSKGLCV-SINACNSLLGGLVKVGWVDLAWEIYQEV 88

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V +    +  N  T N++I  +C+   ++N      +M  +   PD+ TY TL++  C++
Sbjct: 89  VRS---GVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQ 145

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             L+EA  L+D M   G  P   T+N +INGLCK G+  RA  ++D M   G  P+  TY
Sbjct: 146 GLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATY 205

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N L+   C   N+  A  + D M +   +P+ V++  +I  L K G      +    M+ 
Sbjct: 206 NILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKN 265

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                +  IY+ LI G  + G   +A+K+  +M+E+GC  + V Y+ +++GLC+     E
Sbjct: 266 AGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE 325

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A+E+  EM   G   + +T+++L+ G+ + G  +KAV +++ M + N   + V Y+ LI 
Sbjct: 326 ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLID 385

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C+  ++ +   +W  M+SR   P+ ++Y  +I+G CN G V EA +L++EM  +E   
Sbjct: 386 GFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM--VEKGF 443

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           +  + T N ++   C+  N   + + L++M+ +G  PD +T N  +              
Sbjct: 444 EATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLING------------ 491

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      K +     F +V  M    L P   T+  ++    R  R+Q A
Sbjct: 492 ---------FIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 536



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 234/455 (51%), Gaps = 6/455 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  AY +  L+EEA  L  +M  +   K  V ++N+++N + + G Y RA    + ++  
Sbjct: 138 LINAYCRQGLLEEAFELMDSMSGK-GLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML-- 194

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
             + + P+T T+N+++   CR   + +A ++F EMP +   PD+ ++  L+  L K   L
Sbjct: 195 -KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCL 253

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A+    +M+  G  P  V + +LI G C+NG +  A K+ D M  +GC+ + VTYNT+
Sbjct: 254 DQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTI 313

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++GLC +  L +A  L   M      P+  T+ T+ING  K G       +   M +R  
Sbjct: 314 LNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL 373

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TLI G  K  + E   +LW  M+ +   PN + Y  LI+G C +G   EA  
Sbjct: 374 KPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFR 433

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EM+  G  A   T ++++KG+  +G   KA E   +M     V + + Y+ LI+G  
Sbjct: 434 LWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 493

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           ++  +  A  +  +M + G  PDV+ Y+ +++G    G ++EA  +  +M  +E    PD
Sbjct: 494 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM--IERGVNPD 551

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             TY  L+N    Q+N+  +  + + M+ RG  PD
Sbjct: 552 RSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 13/271 (4%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKS----LEMVLYRMRREKRVVLEKSF 121
           +DE+F    + G +     TF +LI  Y+  G+        EM++ R  +   V    ++
Sbjct: 326 ADELFTEMTERGVFP-DFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVV----TY 380

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
             +   + K   +E+   L++ M+        + S+  ++N     G    A   ++ +V
Sbjct: 381 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHI-SYGILINGYCNMGCVSEAFRLWDEMV 439

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
                      +T N ++K  CR G    A +    M ++   PD  TY TL++G  KE 
Sbjct: 440 ---EKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEE 496

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            +D A  L+++M+  G  P  +T+NV++NG  + G +  A  ++  M  +G  P+  TY 
Sbjct: 497 NMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYT 556

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           +LI+G   + NL +A  + D M+    +P++
Sbjct: 557 SLINGHVTQNNLKEAFRVHDEMLQRGFVPDD 587


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 251/502 (50%), Gaps = 27/502 (5%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FN+VL+ + Q+G     +E    +       +  N  T N+ I+ +C  G ++ A+ 
Sbjct: 211 VATFNNVLHALCQKG---DVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVA 267

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L   M      PD+ TY TLM GLCK++++ EA   L  M   GC P   T+N +I+G C
Sbjct: 268 LVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYC 326

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K+G L  A +L+ +   KG +P+ VTY +LI+GLC +G++++A+ L +   A    P+ V
Sbjct: 327 KSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLV 386

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            Y +++ GL + G  +   +V+  M E   H + + Y+ +I+GL K G   DA  +    
Sbjct: 387 VYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDA 446

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + KG  P+   ++ LIDG C+  K D A +++  M   G A +  TY+S++ G  ++GK 
Sbjct: 447 IVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKA 506

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +  E +++M    C  N + Y++LI   C+  +L EA  V  +M   G  PD V+++++
Sbjct: 507 KEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTL 566

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           IHG C  G ++ A  LF ++   E        T+NIL+ A   + N+  +  +   M+ +
Sbjct: 567 IHGFCRNGDLDGAYLLFQKL--DEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK 624

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           G  PDL T  I +           DG          L K       +  +  M+ K   P
Sbjct: 625 GYKPDLYTYRILV-----------DG----------LCKAANVDRAYAHLAEMISKGFVP 663

Query: 634 QTSTWERVVQELCRPKRIQAAI 655
             +T+ R++  L    R+  A+
Sbjct: 664 SMATFGRMLNLLAMNHRVSEAV 685



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 154/571 (26%), Positives = 274/571 (47%), Gaps = 29/571 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
            + +LI+   ++G    ++  L   R       L+  ++   +AY +A  +  A+  F  
Sbjct: 37  AYRALIRELVSAGRLDDVDAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D F C     ++N++++ ++    + +A + Y  ++ A    + P+  T  + +K+ C
Sbjct: 97  M-DLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAA---GVAPDARTHTVRLKSFC 152

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G    A++L R +  R C+     YCT++ GL        A  L DEM     FP   
Sbjct: 153 LTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVA 212

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           TFN +++ LC+ G++  +  L+  +  +G   N+ T N  I GLC  G L++AV+L++RM
Sbjct: 213 TFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM 272

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             +   P+ VTY T++ GL K  +  + A+ L  M  +    +++ Y+T+I G  K G  
Sbjct: 273 -GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGML 331

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A +L K  + KG  P+ V Y +LI+GLC  G  + A E+  E        +   Y+SL
Sbjct: 332 QEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSL 391

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +KG    G    A+++  +M +  C  +   Y+++I+GLC+ G + +A +V    + +G 
Sbjct: 392 VKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY 451

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PDV  ++++I G C    ++ AL+L   M        PDV TYN +LN LCK       
Sbjct: 452 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWTY--GIAPDVITYNSVLNGLCKAGKAKEV 509

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
            +    M+ +GC P+ +T NI +    +           +N+L       +  SG   ++
Sbjct: 510 NETFEEMILKGCRPNAITYNILIENFCK-----------INQL-------EEASG---VI 548

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M Q  L P   ++  ++   CR   +  A
Sbjct: 549 VRMCQDGLVPDAVSFNTLIHGFCRNGDLDGA 579



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 245/464 (52%), Gaps = 43/464 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA +    M+++  C     ++N++++   + G+   A E    + +A     +P+ +
Sbjct: 296 VQEAAQYLGRMMNQ-GCIPDDFTYNTIIDGYCKSGMLQEATEL---LKDAVFKGFVPDRV 351

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  +I  +C  G ++ A++LF E   ++ +PD+  Y +L+ GLC++  +  A+ +++EM
Sbjct: 352 TYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 411

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +GC P   T+N++INGLCK G +  AA ++++  +KG LP+  T+NTLI G C +  L
Sbjct: 412 VEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKL 471

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A+ L++RM      P+ +TY +++NGL                               
Sbjct: 472 DSALQLVERMWTYGIAPDVITYNSVLNGLC------------------------------ 501

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
                K GKA++  + +++M+ KGC+PN + Y+ LI+  C++ + +EA  ++  M  +G 
Sbjct: 502 -----KAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGL 556

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +A ++++L+ GF  +G    A  +++ + +         +++LI        ++ A  
Sbjct: 557 VPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 616

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M+S+G KPD+  Y  ++ GLC A +V+ A     EM  +     P + T+  +LN 
Sbjct: 617 IFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEM--ISKGFVPSMATFGRMLNL 674

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
           L     +S ++ +++ M+  G  P++V  +  L+  K+++ AP+
Sbjct: 675 LAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILSTDKKEIAAPK 716


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 146/443 (32%), Positives = 225/443 (50%), Gaps = 5/443 (1%)

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
           E  CK  + ++N+ +  + Q G    ALE    ++      + P+  T+ L++   C+  
Sbjct: 269 EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEK---GLGPDGHTYTLLVDGFCKQK 325

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
               A  +F  MP     P+ +TY  L+DG  KE  ++EA+ + DEM   G     VT+N
Sbjct: 326 RSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYN 385

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
            +I G+ K GE+ +A  L + M + G  P+  TYN LI G     ++ KA  LL  M A 
Sbjct: 386 AMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
           K  P+  TY  +I+GL           VL  M       N ++Y TLI    +E + E A
Sbjct: 446 KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           ++L K M+  G  P+   Y+ LI GLCR  K +EA+ +L +M   G   NA TY + +  
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           + +SG+   A   +KDM  +  V N V Y++LI G C+ G   EA   +  ML +G  PD
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           + AYS++IH L   G  +EA+ +F +   L+    PDVF YN L++  CK+ +I  +  L
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKF--LKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683

Query: 567 LNSMMDRGCDPDLVTCNIFLTAL 589
            + M+  G +P++V  N  +  L
Sbjct: 684 YDEMLHNGINPNIVVYNTLINGL 706



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 163/618 (26%), Positives = 294/618 (47%), Gaps = 55/618 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---------------------------KRVVL 117
           T+ ++I+ +   GD    +MVL  M +E                           K++++
Sbjct: 244 TYTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMM 303

Query: 118 EK-------SFIFIFKAYGKAHLVEEAIRLFHTMVDE-FHCKRTVKSFNSVLNVIIQEGL 169
           EK       ++  +   + K    +EA  +F +M     +  R   ++ ++++  I+EG 
Sbjct: 304 EKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRF--TYTALIDGFIKEGN 361

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
              AL   + ++      +  N +T+N +I  + + G +  A+ LF EM +   EPD +T
Sbjct: 362 IEEALRIKDEMITR---GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWT 418

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  L+DG  K + + +A  LL EM+     P+P T++VLI+GLC + +L +A +++D M 
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMI 478

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             G  PN   Y TLI     +   + A+ LL  M+A+  +P+   Y  +I GL +  +  
Sbjct: 479 RNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVE 538

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +   +L+ M E+    N + Y   I+   K G+ + A + +K M+  G  PN V+Y+ LI
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILI 598

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            G C VG   EA      M+  G   +   YS+++    ++GK  +A+ ++    K   V
Sbjct: 599 KGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVV 658

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +   Y+ LI G C++G + +A  ++ +ML  G  P++V Y+++I+GLC  G V +A +L
Sbjct: 659 PDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAREL 718

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL--- 586
           F+E+   E    PDV TY+ +++  CK  N++ +  L + M+ +G  PD     I +   
Sbjct: 719 FDEI--EEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 776

Query: 587 -------TALKEKLEAPQDGTDFL---NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
                   AL    EA Q     L   N L     K  +     ++ + M+ K L+P   
Sbjct: 777 GKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIV 836

Query: 637 TWERVVQELCRPKRIQAA 654
           T+  ++    + + ++ A
Sbjct: 837 TYTILIDAYGKAEMMEEA 854



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 158/619 (25%), Positives = 271/619 (43%), Gaps = 54/619 (8%)

Query: 72  STPK-LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE--KSFIFIFKAY 128
           STP+ L SY +       L     NSG     + +L ++ + ++  LE   S +  ++ +
Sbjct: 115 STPQYLHSYSI-------LAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREF 167

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL-------------- 174
           G ++L      +F   +D+F     +   +SV    I EG +   +              
Sbjct: 168 GGSNLT-----VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANM 222

Query: 175 -----EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
                + Y  +V AK   I+P+  T+  VIK  C++G V     +  EM  + C+P+++T
Sbjct: 223 MGLFWKVYGSMVEAK---IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFT 278

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y   + GLC+   +DEA+ +   M   G  P   T+ +L++G CK      A  + ++M 
Sbjct: 279 YNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             G  PN  TY  LI G   +GN+++A+ + D M+      N VTY  +I G+ K G   
Sbjct: 339 SSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMA 398

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               +   M       + + Y+ LI G  K      A +L  +M  +   P+   YS LI
Sbjct: 399 KAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC      +A E+L +MI NG   N F Y +L+K + +  +   A+E+ K M  N  +
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +  CY+ LI GLC   K+ EA+M+   M  +G KP+   Y + I+    +G ++ A + 
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F +ML       P+   Y IL+   C   N   ++     M+++G  PD+   +  + +L
Sbjct: 579 FKDML--SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSL 636

Query: 590 KEKLEAPQDGTDFL--------------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            +  +  +    FL              N L     K        ++ + ML   ++P  
Sbjct: 637 SKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNI 696

Query: 636 STWERVVQELCRPKRIQAA 654
             +  ++  LC+   +  A
Sbjct: 697 VVYNTLINGLCKLGEVTKA 715



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 225/457 (49%), Gaps = 7/457 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +A  VEEA  L   M  E   K    ++ + +N+  + G    A  ++  ++++    I+
Sbjct: 533 RAKKVEEAKMLLVDM-GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS---GIV 588

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN + + ++IK  C +G    A+  F+ M  +   PDI  Y  ++  L K  +  EA+ +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             +    G  P    +N LI+G CK G++ +A++L D M   G  PN V YNTLI+GLC 
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCK 708

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G + KA  L D +     +P+ VTY TII+G  K G   +  ++   M  +    + YI
Sbjct: 709 LGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYI 768

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y  LI G  KEG  E A+ L+ +  +K    +   +++LID  C+ GK  EA E+  +M+
Sbjct: 769 YCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDMV 827

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +     N  TY+ L+  + ++    +A +++ DM   N + N + Y+ L+    + G   
Sbjct: 828 DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRF 887

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +   ++  M +RG   D +AY  M    C  G   EALKL N+ L    K + DVF  + 
Sbjct: 888 KMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVF--DA 945

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L+  LCK+  IS  ++LL+ M          TCN  L
Sbjct: 946 LIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 982



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 159/616 (25%), Positives = 286/616 (46%), Gaps = 30/616 (4%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
           +GN +      DE+     KL        T+ ++I   A +G+      +   M      
Sbjct: 359 EGNIEEALRIKDEMITRGLKLNVV-----TYNAMIGGIAKAGEMAKAMSLFNEMLMAGLE 413

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA-L 174
               ++  +   Y K+H + +A  L   M      K T   F    +V+I  GL H + L
Sbjct: 414 PDTWTYNLLIDGYLKSHDMAKACELLAEMKAR---KLTPSPF--TYSVLIS-GLCHSSDL 467

Query: 175 EFYNHIVNAKHMN-ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
           +  N +++    N + PN   +  +IK   +    + AI+L + M      PD++ Y  L
Sbjct: 468 QKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCL 527

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           + GLC+  +++EA +LL +M   G  P   T+   IN   K+GE+  A +   +M   G 
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGI 587

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           +PN V Y  LI G C  GN  +A+S    M+    +P+   Y  II+ L K G+  +   
Sbjct: 588 VPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMG 647

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           V +   +     + ++Y++LISG  KEG  E A +L+ +M+  G  PN VVY+ LI+GLC
Sbjct: 648 VFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLC 707

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           ++G+  +A E+  E+       +  TYS+++ G+ +SG   +A +++ +M       +  
Sbjct: 708 KLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGY 767

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y +LI G  ++G L +A  ++ +   +     + A++S+I   C  G V EA +LF++M
Sbjct: 768 IYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFDDM 826

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL------- 586
           +  + K  P++ TY IL++A  K   +  +  L   M  R   P+ +T    L       
Sbjct: 827 V--DKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG 884

Query: 587 -----TALKEKLEAPQDGTDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
                 +L + +EA     D +    +A    K  ++    K++   L + +  +   ++
Sbjct: 885 NRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 944

Query: 640 RVVQELCRPKRIQAAI 655
            ++  LC+ K+I   +
Sbjct: 945 ALIFHLCKEKQISTVL 960



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 215/488 (44%), Gaps = 35/488 (7%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N   F++ I     LG ++ A  +F         P +     LM  L K N +     + 
Sbjct: 171 NLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVY 230

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             M      P   T+  +I   CK G++ +  K+V +   K C PN  TYN  I GLC  
Sbjct: 231 GSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG-KMVLSEMEKECKPNLFTYNAFIGGLCQT 289

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D+A+ +   M+     P+  TY  +++G  K  R+ +   +  SM     + N + Y
Sbjct: 290 GAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTY 349

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI G  KEG  E+A+++  +M+ +G K N V Y+A+I G+ + G+  +A  +  EM+ 
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   + +TY+ L+ G+ +S    KA E+  +M       +   YSVLI GLC    L++
Sbjct: 410 AGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  V  QM+  G KP+V  Y ++I         E A++L   M+       PD+F YN L
Sbjct: 470 ANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA--NGVLPDLFCYNCL 527

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +  LC+   +  +  LL  M ++G  P+  T   F+    +  E          ++A R 
Sbjct: 528 IIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI---------QVAERY 578

Query: 611 FKRQRTSG-----------------------GFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           FK   +SG                            + ML+K L P    +  ++  L +
Sbjct: 579 FKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSK 638

Query: 648 PKRIQAAI 655
             + + A+
Sbjct: 639 NGKTKEAM 646



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 166/358 (46%), Gaps = 4/358 (1%)

Query: 157  FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
            +NS+++   +EG   +A + Y+ ++   H  I PN + +N +I  +C+LG V  A +LF 
Sbjct: 664  YNSLISGFCKEGDIEKASQLYDEML---HNGINPNIVVYNTLINGLCKLGEVTKARELFD 720

Query: 217  EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            E+  ++  PD+ TY T++DG CK   L EA  L DEM   G  P    + +LI+G  K G
Sbjct: 721  EIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG 780

Query: 277  ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
             L +A  L      K  + +   +N+LI   C  G + +A  L D MV  K  PN VTY 
Sbjct: 781  NLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYT 839

Query: 337  TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
             +I+   K     +  ++ + ME R    N   Y++L+    + G     + L+K M  +
Sbjct: 840  ILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 899

Query: 397  GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
            G   + + Y  +    C+ GK  EA ++L + +  G       + +L+    +  +    
Sbjct: 900  GIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTV 959

Query: 457  VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            +E+  +M K     +    + L+ G  + G   EA  V   M   G  P  ++ +  I
Sbjct: 960  LELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSI 1017



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 191/385 (49%), Gaps = 8/385 (2%)

Query: 83   DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRL 140
            D   YS I H + S + K+ E +   ++  K  V+   F++  +   + K   +E+A +L
Sbjct: 625  DIRAYSAIIH-SLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683

Query: 141  FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
            +  M+        +  +N+++N + + G   +A E ++ I   +  +++P+ +T++ +I 
Sbjct: 684  YDEMLHN-GINPNIVVYNTLINGLCKLGEVTKARELFDEI---EEKDLVPDVVTYSTIID 739

Query: 201  TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              C+ G +  A +LF EM  +   PD Y YC L+DG  KE  L++A+ L  E Q      
Sbjct: 740  GYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQ-QKSVG 798

Query: 261  TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
            +   FN LI+  CK+G++  A +L D+M  K   PN VTY  LI        +++A  L 
Sbjct: 799  SLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 858

Query: 321  DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
              M     +PN +TY +++    ++G       +   ME R    +   Y  + S   KE
Sbjct: 859  LDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKE 918

Query: 381  GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            GK+ +A+KL  + + +G K    V+ ALI  LC+  +     E+L EM     + ++ T 
Sbjct: 919  GKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTC 978

Query: 441  SSLMKGFFESGKGHKAVEIWKDMAK 465
            ++L+ GF++SG   +A ++   M +
Sbjct: 979  NTLLLGFYKSGNEDEASKVLGVMQR 1003



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 17/305 (5%)

Query: 124  IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII----QEGLYHRALEFYNH 179
            I   Y K+  + EA +LF  M+      + +     +  ++I    +EG   +AL  + H
Sbjct: 737  IIDGYCKSGNLTEAFKLFDEMI-----SKGISPDGYIYCILIDGCGKEGNLEKALSLF-H 790

Query: 180  IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
                K +  L     FN +I + C+ G V  A +LF +M  +   P+I TY  L+D   K
Sbjct: 791  EAQQKSVGSLS---AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGK 847

Query: 240  ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
               ++EA  L  +M+     P  +T+  L+    + G   +   L  +M  +G   + + 
Sbjct: 848  AEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIA 907

Query: 300  YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
            Y  +    C +G   +A+ LL++ +       +  +  +I  L K  +      +L  M 
Sbjct: 908  YGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMG 967

Query: 360  ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            + +  ++    +TL+ G +K G  ++A K+   M   G  P ++   +L D +   G+ D
Sbjct: 968  KEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSL---SLTDSI-STGRDD 1023

Query: 420  EAEEI 424
               +I
Sbjct: 1024 MKSDI 1028


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 125/344 (36%), Positives = 199/344 (57%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+ ++I+  C    V  A++L  EM  R C+PD+ TY  L++G+CKE RLDEA+  
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+ M   G  P  +T N+++  +C  G    A KL+  M  KGC P+ VT+N LI+ LC 
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           KG L +A+ +L++M    C PN ++Y  +++G  K  +     + L  M  R  + +   
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+T+++ L K+GK + A++L  Q+  KGC P  + Y+ +IDGL +VGK D+A E+L EM 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  TYSSL+ G    GK  +A++ + D+       N   Y+ ++ GLC+  +  
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            A      M+S+GCKP  V+Y+ +I G+ N G  +EAL+L NE+
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNEL 357



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 198/361 (54%), Gaps = 3/361 (0%)

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +LD      C+P  +T+ +LI   C    +G+A KL+D M  +GC P+ VTYN L++G+C
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +G LD+A+  L+ M +    PN +T+  I+  +   GR +D  ++L  M  +    +  
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVV 122

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ LI+ L ++G    A+ + ++M   GC PN++ Y+ L+ G C+  K D A + L  M
Sbjct: 123 TFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIM 182

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ GC  +  TY++++    + GK   AVE+   ++   C    + Y+ +I GL + GK 
Sbjct: 183 VSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKT 242

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A  +  +M  +G KPDV+ YSS+I GL   G VEEA+K F+++     K  P+ FTYN
Sbjct: 243 DQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVK--PNAFTYN 300

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            ++  LCK      +ID L  M+ +GC P  V+  I +  +  +  A ++  + LNEL  
Sbjct: 301 SIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLA-KEALELLNELCS 359

Query: 609 R 609
           R
Sbjct: 360 R 360



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 199/361 (55%), Gaps = 4/361 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + +A      V +A++L   M     CK  V ++N ++N + +EG    A++F N 
Sbjct: 18  TYTILIEATCAESGVGQAMKLLDEMGSR-GCKPDVVTYNVLVNGMCKEGRLDEAIKFLNS 76

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + +       PN +T N++++++C  G   +A +L  EM  + C P + T+  L++ LC+
Sbjct: 77  MPSYGSQ---PNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +  L  A+ +L++M   GC P  +++N L++G CK  ++ RA + ++ M  +GC P+ VT
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNT++  LC  G +D AV LL+++ +  C P  +TY T+I+GL K+G+      +L  M 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    +   YS+LI+GL +EGK E+A+K +  +   G KPN   Y++++ GLC+  + D
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A + L  MI+ GC     +Y+ L++G    G   +A+E+  ++     V       V++
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373

Query: 480 H 480
            
Sbjct: 374 R 374



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 177/374 (47%), Gaps = 58/374 (15%)

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +++D    K C P+ +TY  LI   C +  + +A+ LLD M +  C P+ VTY  ++N  
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVN-- 59

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
                                            G+ KEG+ ++A+K    M   G +PN 
Sbjct: 60  ---------------------------------GMCKEGRLDEAIKFLNSMPSYGSQPNV 86

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           + ++ ++  +C  G+  +AE++L EM+  GC+ +  T++ L+      G   +A++I + 
Sbjct: 87  ITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEK 146

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M  + C  N + Y+ L+HG C++ K+  A      M+SRGC PD+V Y++M+  LC  G 
Sbjct: 147 MPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGK 206

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           V+ A++L N++        P + TYN +++ L K      +++LL+ M  +G  PD++T 
Sbjct: 207 VDAAVELLNQL--SSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITY 264

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           +  +  L  + +          E AI+ F       GF +          P   T+  ++
Sbjct: 265 SSLIAGLSREGKV---------EEAIKFFHDVE---GFGV---------KPNAFTYNSIM 303

Query: 643 QELCRPKRIQAAIN 656
             LC+ ++   AI+
Sbjct: 304 FGLCKAQQTDRAID 317



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 106/213 (49%), Gaps = 16/213 (7%)

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           +E+     +  C  + + Y++LI   C +  + +A  +  +M SRGCKPDVV Y+ +++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           +C  G ++EA+K  N M      SQP+V T+NI+L ++C       +  LL  M+ +GC 
Sbjct: 61  MCKEGRLDEAIKFLNSMPSY--GSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCS 118

Query: 577 PDLVTCNIFLTALKEK---------LEA-PQDGTD----FLNELAIRLFKRQRTSGGFKI 622
           P +VT NI +  L  K         LE  P  G        N L     K ++     + 
Sbjct: 119 PSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQY 178

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +E+M+ +   P   T+  ++  LC+  ++ AA+
Sbjct: 179 LEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAV 211


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  246 bits (627), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 272/540 (50%), Gaps = 27/540 (5%)

Query: 67  DEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK 126
           D +F++  +LG  +     F  + + +      +S   +L+R+ +  R  L + F   FK
Sbjct: 189 DALFSALIELGMLEEASECFLKM-RKFRVFPKPRSCNALLHRLSKVGRGDLSRKF---FK 244

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             G A +                 KR+V ++N +++ + +EG    A   +  +   K  
Sbjct: 245 DMGAAGI-----------------KRSVFTYNIMIDYLCKEGDLEMARSLFTQM---KEA 284

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
              P+ +T+N +I    +LGL+D  I +F +M   +C+PD+ TY  L++  CK  R+ +A
Sbjct: 285 GFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKA 344

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
              L EM+ +G  P  VT++  I+  CK G L  A K   +M      PNE TY +LI  
Sbjct: 345 FEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDA 404

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C  GNL +A+ L++ ++ +    N VTY  +++GL + GR  +   V  +M       N
Sbjct: 405 NCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPN 464

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
           +  Y+ L+ G  K  + E A  + K+M EK  KP+ ++Y  ++ GLC   + +EA+ ++ 
Sbjct: 465 QETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIG 524

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E+  +G   NA  Y++LM  +F+SG+  +A+ + ++M     +  EV Y  LI GLC+ G
Sbjct: 525 EIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSG 584

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            ++EA   + +M   G +P+V  Y++++ GLC     E A KLF+EM  L+    PD   
Sbjct: 585 LVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEM--LDKGMMPDKIA 642

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           Y  L++   K  N+  +++L + M++ G + DL      +  L    +  Q   + L+E+
Sbjct: 643 YTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQV-QKARNLLDEM 701



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 243/490 (49%), Gaps = 6/490 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I +    GD +    +  +M+         ++  +   +GK  L++E I +F  M
Sbjct: 257 TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 316

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   C   V ++N+++N   +     +A EF + +   K   + PN +T++  I   C+
Sbjct: 317 KDA-DCDPDVITYNALINCFCKFERMPKAFEFLHEM---KANGLKPNVVTYSTFIDAFCK 372

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G++  AI+ F +M      P+ +TY +L+D  CK   L EA+ L++E+   G     VT
Sbjct: 373 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 432

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L++GLC+ G +  A ++   M   G  PN+ TY  L+HG      ++ A  +L  M 
Sbjct: 433 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 492

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ + YGTI+ GL    R  +   ++  ++E   + N  IY+TL+   FK G+A 
Sbjct: 493 EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 552

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ L ++M++ G     V Y ALIDGLC+ G   EA      M   G   N   Y++L+
Sbjct: 553 EALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALV 612

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++     A +++ +M     + +++ Y+ LI G  + G L+EA  +  +M+  G +
Sbjct: 613 DGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGME 672

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D+ AY+++I GL ++G V++A  L +EM  +     PD   Y  L+        +  ++
Sbjct: 673 LDLHAYTALIWGLSHSGQVQKARNLLDEM--IGKGVLPDEVVYMCLIKKYYALGKVDEAL 730

Query: 565 DLLNSMMDRG 574
           +L N M  RG
Sbjct: 731 ELQNEMAKRG 740



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 228/461 (49%), Gaps = 42/461 (9%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F+++ + +I+ G+   A E +   +  +   + P   + N ++  + ++G  D + + F+
Sbjct: 188 FDALFSALIELGMLEEASECF---LKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFK 244

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M     +  ++TY  ++D LCKE  L+ A  L  +M+  G  P  VT+N LI+G  K G
Sbjct: 245 DMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLG 304

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L     + + M    C P+ +TYN LI+  C    + KA   L  M A+   PN VTY 
Sbjct: 305 LLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYS 364

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T I+   K G   +  +  + M       NE+ Y++LI    K G   +A+KL +++++ 
Sbjct: 365 TFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQA 424

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G K N V Y+AL+DGLC  G+  EAEE+   M+N G A N  TY++L+ GF ++ +   A
Sbjct: 425 GIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYA 484

Query: 457 VEIWKDMAKNNCVYNEVC-YSVLIHGLCEDGKLREARM---------------VWT---- 496
            +I K+M K  C+  ++  Y  ++ GLC + +L EA++               ++T    
Sbjct: 485 KDILKEM-KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMD 543

Query: 497 ----------------QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
                           +ML  G     V Y ++I GLC +G V+EA+  F  M   E   
Sbjct: 544 AYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMS--EIGL 601

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           QP+V  Y  L++ LCK +    +  L + M+D+G  PD + 
Sbjct: 602 QPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIA 642



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 219/472 (46%), Gaps = 12/472 (2%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           VL  + ++ R+ L + F +     G  H  E    L H +     C R     N+VL  +
Sbjct: 104 VLVELCQDARLAL-RFFEWAKGRIGFQHTSEAYCILVHILF----CARFYSDANAVLKEL 158

Query: 165 IQEGLYHRALEFYN--HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
           I      R L  ++   ++ A     +P    F+ +   +  LG+++ A + F +M    
Sbjct: 159 I---CLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKMRKFR 215

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
             P   +   L+  L K  R D +     +M   G   +  T+N++I+ LCK G+L  A 
Sbjct: 216 VFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMAR 275

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
            L   M   G  P+ VTYN+LI G    G LD+ + + ++M  + C P+ +TY  +IN  
Sbjct: 276 SLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCF 335

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K  R       L  M+      N   YST I    KEG  ++A+K +  M      PN 
Sbjct: 336 CKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNE 395

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
             Y++LID  C+ G   EA +++ E++  G   N  TY++L+ G  E G+  +A E+++ 
Sbjct: 396 FTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRA 455

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M       N+  Y+ L+HG  +  ++  A+ +  +M  +  KPD++ Y +++ GLCN   
Sbjct: 456 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 515

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +EEA  L  E+   E     +   Y  L++A  K    + ++ LL  M+D G
Sbjct: 516 LEEAKLLIGEI--KESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLG 565



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 200/434 (46%), Gaps = 23/434 (5%)

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
           C P    +  L   L +   L+EA     +M+    FP P + N L++ L K G    + 
Sbjct: 181 CVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSR 240

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           K   +M   G   +  TYN +I  LC +G+L+ A SL  +M  +   P+ VTY ++I+G 
Sbjct: 241 KFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            KLG   +   +   M++     +   Y+ LI+   K  +   A +   +M   G KPN 
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNV 360

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V YS  ID  C+ G   EA +   +M       N FTY+SL+    ++G   +A+++ ++
Sbjct: 361 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 420

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           + +     N V Y+ L+ GLCE+G+++EA  V+  ML+ G  P+   Y++++HG   A  
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           +E A  +  EM   E   +PD+  Y  +L  LC +S +  +  L+  + + G + + V  
Sbjct: 481 MEYAKDILKEMK--EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 538

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
              + A                      FK  + +    ++E ML   L     T+  ++
Sbjct: 539 TTLMDA---------------------YFKSGQATEALTLLEEMLDLGLIATEVTYCALI 577

Query: 643 QELCRPKRIQAAIN 656
             LC+   +Q A++
Sbjct: 578 DGLCKSGLVQEAMH 591



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 189/385 (49%), Gaps = 4/385 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ + I  +   G  +        MRR      E ++  +  A  KA  + EA++L   +
Sbjct: 362 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 421

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +   K  V ++ ++L+ + +EG    A E +  ++NA    + PN  T+  ++    +
Sbjct: 422 L-QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA---GVAPNQETYTALVHGFIK 477

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              ++ A  + +EM  +  +PD+  Y T++ GLC E+RL+EA LL+ E++  G     V 
Sbjct: 478 AKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVI 537

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L++   K+G+   A  L++ M   G +  EVTY  LI GLC  G + +A+    RM 
Sbjct: 538 YTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMS 597

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PN   Y  +++GL K        ++   M ++    ++  Y+ LI G  K G  +
Sbjct: 598 EIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQ 657

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ L  +M+E G + +   Y+ALI GL   G+  +A  +L EMI  G   +   Y  L+
Sbjct: 658 EALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLI 717

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCV 469
           K ++  GK  +A+E+  +MAK   +
Sbjct: 718 KKYYALGKVDEALELQNEMAKRGMI 742


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 248/500 (49%), Gaps = 40/500 (8%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           + +  P+ G   +    ++ +++     G F+S   VL  +      +   +   +  A 
Sbjct: 144 VLDEMPRRGCAPI-PPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAI 202

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
                V+EA+ L   +   F C+  V S+N+VL  +     +    E    +V    M  
Sbjct: 203 CDQGSVDEALHLLRDL-PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV---RMAC 258

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN +TFN +I  +CR GL +   ++  +M    C PDI  Y T++DG+CKE  L+ A  
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 318

Query: 249 LLDEMQVDG------CFPT-----------------------------PVTFNVLINGLC 273
           +L+ M   G      C+ T                              VTFN+L++  C
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           +NG + R  +L++ M  +GC+P+ +TY T+I+G C +G +D+AV LL  M A  C PN +
Sbjct: 379 QNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 438

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           +Y  ++ GL    R VD   ++  M ++   +N   ++TLI+ L K+G  E A++L KQM
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +  GC P+ + YS +IDGL + GK DEA E+L  M+N G + N   YSS+       G+ 
Sbjct: 499 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           +K ++++ ++       + V Y+ +I  LC+ G+   A      M+S GC P+   Y+ +
Sbjct: 559 NKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTIL 618

Query: 514 IHGLCNAGSVEEALKLFNEM 533
           I GL + G V+EA ++  E+
Sbjct: 619 IRGLASEGFVKEAQEMLTEL 638



 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 249/487 (51%), Gaps = 23/487 (4%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +  +    A  + + PN  T+  V++ +C  G + +A+ +  EMP R C P    
Sbjct: 100 YCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPM 159

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  +++  C+      AV +L+++   GC       N+++N +C  G +  A  L+ ++ 
Sbjct: 160 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP 219

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC P+ V+YN ++ GLC+         L++ MV   C PN VT+ T+I+ L + G   
Sbjct: 220 SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFE 279

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               VL  M E     +  +Y+T+I G+ KEG  E A ++  +M   G KPN V Y+ L+
Sbjct: 280 RVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLL 339

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   + +E EE+L EM +  C  +  T++ L+  F ++G   + +E+ + M +  C+
Sbjct: 340 KGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCM 399

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + + Y+ +I+G C++G + EA M+   M + GCKP+ ++Y+ ++ GLC+A    +A  L
Sbjct: 400 PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDL 459

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++M  ++     +  T+N L+N LCK+  +  +I+LL  M+  GC PDL++ +  +   
Sbjct: 460 MSQM--IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI--- 514

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                   DG          L K  +T    +++ VM+ K +SP T  +  +   L R  
Sbjct: 515 --------DG----------LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556

Query: 650 RIQAAIN 656
           RI   I 
Sbjct: 557 RINKVIQ 563



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 237/448 (52%), Gaps = 14/448 (3%)

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           NLV+  +C  G VD A+ L R++P   CEPD+ +Y  ++ GLC   R      L++EM  
Sbjct: 196 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
             C P  VTFN LI+ LC+NG   R  +++  M   GC P+   Y T+I G+C +G+L+ 
Sbjct: 256 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 315

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +L+RM +    PN V Y T++ GL    R  +   +L  M ++   +++  ++ L+ 
Sbjct: 316 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              + G  +  ++L +QM+E+GC P+ + Y+ +I+G C+ G  DEA  +L  M   GC  
Sbjct: 376 FFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  +Y+ ++KG   + +   A ++   M +  C  N + ++ LI+ LC+ G + +A  + 
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            QML  GC PD+++YS++I GL  AG  +EAL+L N M  +     P+   Y+ + +AL 
Sbjct: 496 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM--VNKGMSPNTIIYSSIASALS 553

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL----------NE 605
           ++  I+  I + +++ D     D V  N  +++L ++ E  +   +FL          NE
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGET-ERAIEFLAYMVSSGCVPNE 612

Query: 606 LAIRLFKRQRTSGGF-KIVEVMLQKFLS 632
               +  R   S GF K  + ML +  S
Sbjct: 613 STYTILIRGLASEGFVKEAQEMLTELCS 640



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 160/358 (44%), Gaps = 30/358 (8%)

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN ++ G C  G L+ A  L     A    PN  TY  ++  L   GR  D   VL  M 
Sbjct: 93  YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            R       +Y  ++    + G    A+++ + +  +GC  +    + +++ +C  G  D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA  +L ++ + GC  +  +Y++++KG   + +     E+ ++M +  C  N V ++ LI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
             LC +G       V  QM+  GC PD+  Y+++I G+C  G +E A ++ N M     K
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             P+V  YN LL  LC       + +LL  M D+ C  D VT NI +             
Sbjct: 330 --PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILV------------- 374

Query: 600 TDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            DF   N L  R+          +++E ML++   P   T+  V+   C+   I  A+
Sbjct: 375 -DFFCQNGLVDRV---------IELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAV 422


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 148/456 (32%), Positives = 245/456 (53%), Gaps = 6/456 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++AI LF  M         ++ F+ +L+ I +   +   + F   +   + + I  N  
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIE-FSKLLSAIAKMNKFDLVISFGEKM---EILGISHNLY 114

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N++I   CR   +  A+ L  +M     EPDI T  +L++G C  NR+ +AV L+D+M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  VTF  LI+GL  + +   A  L+D M  +GC P+ VTY  +++GLC +G+ 
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A++LL++M A+K   N V Y T+I+ L K     D   +   ME +    N   YS+L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           IS L   G+  DA +L   M+E+   PN V +SALID   + GK  +AE++  EMI    
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N FTYSSL+ GF    +  +A ++ + M + +C+ N V Y+ LI+G C+  ++ +   
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M  RG   + V Y+++IHG   A   + A  +F +M+ +     P++ TYNILL+ 
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV--GVHPNILTYNILLDG 472

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           LCK   ++ ++ +   +     +PD+ T NI +  +
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 187/356 (52%), Gaps = 4/356 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + +A+ L   MV+  +   TV +F ++++ +    L+++A E    I         P+ +
Sbjct: 164 ISDAVALVDQMVEMGYKPDTV-TFTTLIHGLF---LHNKASEAVALIDRMVQRGCQPDLV 219

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  V+  +C+ G  D A+ L  +M     E ++  Y T++D LCK    D+A+ L  EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G  P  +T++ LI+ LC  G    A++L+ +M  +   PN VT++ LI     KG L
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            KA  L + M+     PN  TY ++ING   L R  +  ++L  M  +    N   Y+TL
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G  K  + +  M+L+++M ++G   NTV Y+ LI G  +    D A+ +  +M++ G 
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             N  TY+ L+ G  ++GK  KA+ +++ + ++    +   Y+++I G+C+ GK +
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 208/443 (46%), Gaps = 18/443 (4%)

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
           Y Y  ++     +  LD+A+ L   M     FP+ + F+ L++ + K  +        + 
Sbjct: 44  YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M + G   N  TYN LI+  C    L  A++LL +M+     P+ VT  +++NG     R
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             D   ++  M E  +  +   ++TLI GLF   KA +A+ L  +M+++GC+P+ V Y A
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +++GLC+ G  D A  +L +M      AN   YS+++    +      A+ ++ +M    
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              N + YS LI  LC  G+  +A  + + M+ R   P++V +S++I      G + +A 
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           KL+ EM  ++    P++FTY+ L+N  C    +  +  +L  M+ + C P++VT N  + 
Sbjct: 344 KLYEEM--IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401

Query: 588 ALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLS 632
               K +    G +   E++ R                F+ +       + + M+   + 
Sbjct: 402 GFC-KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460

Query: 633 PQTSTWERVVQELCRPKRIQAAI 655
           P   T+  ++  LC+  ++  A+
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAM 483



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 23/220 (10%)

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
           ++ Y  +++      +   A+ ++  MA++    + + +S L+  + +  K         
Sbjct: 43  SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 102

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M   G   ++  Y+ +I+  C    +  AL L  +M+ L    +PD+ T N LLN  C 
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKL--GYEPDIVTLNSLLNGFCH 160

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
            + IS ++ L++ M++ G  PD VT    +  L                     F   + 
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL---------------------FLHNKA 199

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           S    +++ M+Q+   P   T+  VV  LC+      A+N
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 157/481 (32%), Positives = 240/481 (49%), Gaps = 30/481 (6%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K T   F  ++    + GL   AL  Y        M++LP     N+V+  + + G  D 
Sbjct: 123 KFTPNVFGVLIIAFSEMGLVEEALWVY------YKMDVLPAMQACNMVLDGLVKKGRFDT 176

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
             +++ +M  R   P++ TY TL+DG C++    +A  L DEM     FPT V + +LI 
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLC    +  A  +   M   G LPN  TYNT++ G C   ++ KA+ L   M+    +P
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP 296

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N VT+G +I+GL K    V   + L+ M       N ++Y+ LI G  K G   +A+ L 
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            ++ +    P+   YS LI GLC V + +EA+ +L EM   G   NA TY++L+ G+ + 
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G   KA+E+   M +     N + +S LI G C+ GK+  A  ++T+M+ +G  PDVVAY
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL--- 567
           +++I G    G+ +EA +L  EM   E    P+VFT + L++ LCK   IS +I L    
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEM--QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAK 534

Query: 568 ---------NSMMDRG-CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
                     + +DR  C P+    ++  TAL + L    DG  F    A + F   R S
Sbjct: 535 TGTDTTGSKTNELDRSLCSPN----HVMYTALIQGL--CTDGRIF---KASKFFSDMRCS 585

Query: 618 G 618
           G
Sbjct: 586 G 586



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/482 (29%), Positives = 236/482 (48%), Gaps = 28/482 (5%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  +  A+ +  LVEEA+ +++ M         +++ N VL+ ++++G +    + Y  +
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKM----DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDM 184

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V A+  +  PN +T+  +I   CR G    A +LF EM  +   P +  Y  L+ GLC E
Sbjct: 185 V-ARGAS--PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGE 241

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +R+ EA  +   M+  G  P   T+N +++G CK   + +A +L   M   G LPN VT+
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTF 301

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
             LI GLC    +  A   L  M +   +PN   Y  +I+G  K G   +   +   +E+
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
            +   + + YS LI GL    + E+A  L ++M +KG  PN V Y+ LIDG C+ G  ++
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A E+  +M   G   N  T+S+L+ G+ ++GK   A+ ++ +M     + + V Y+ LI 
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF---------- 530
           G  +DG  +EA  +  +M   G  P+V   S +I GLC  G + +A+KLF          
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTG 541

Query: 531 ---NEM---LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
              NE+   LC      P+   Y  L+  LC    I  +    + M   G  PD+ TC +
Sbjct: 542 SKTNELDRSLC-----SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIV 596

Query: 585 FL 586
            +
Sbjct: 597 II 598



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 239/514 (46%), Gaps = 55/514 (10%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +FN   +L S +   + F  LI  ++  G  +    V Y+M     +   ++   +    
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKMDVLPAM---QACNMVLDGL 168

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            K    +   +++  MV        V ++ ++++   ++G + +A   ++ ++  K   I
Sbjct: 169 VKKGRFDTMWKVYGDMVAR-GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK---I 224

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P  + + ++I+ +C    +  A  +FR M      P++YTY T+MDG CK   + +A+ 
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L  EM  DG  P  VTF +LI+GLCK  E+  A K + +M   G +PN   YN LI G C
Sbjct: 285 LYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYC 344

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             GNL +A+SL   +   + +P+  TY  +I GL  + R  +   +L  M+++ F  N  
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+TLI G  KEG  E A+++  QM EKG +PN + +S LIDG C+ GK + A  +  EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM------------------------- 463
           +  G   +   Y++L+ G F+ G   +A  + K+M                         
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 464 -----------------AKNN------CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
                            +K N      C  N V Y+ LI GLC DG++ +A   ++ M  
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRC 584

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
            G +PDV     +I G   A  + + + L  ++L
Sbjct: 585 SGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL 618



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 190/381 (49%), Gaps = 17/381 (4%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y K   V++A+ L+  M+ +      V +F  +++ + +      A +F   +++ 
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVV-TFGILIDGLCKTDEMVSARKF---LIDM 324

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               ++PN   +N +I   C+ G +  A+ L  E+      PD++TY  L+ GLC  +R+
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA  LL EM+  G  P  VT+N LI+G CK G + +A ++   M  KG  PN +T++TL
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C  G ++ A+ L   MV    +P+ V Y  +I+G  K G   +  R+   M+E   
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLW-------------KQMMEKGCKPNTVVYSALID 410
           H N +  S LI GL K+G+  DA+KL+              ++    C PN V+Y+ALI 
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC  G+  +A +   +M  +G   + FT   +++G F +      + +  D+ K   + 
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624

Query: 471 NEVCYSVLIHGLCEDGKLREA 491
           N   Y VL  G  E G L+ A
Sbjct: 625 NSSVYRVLAKGYEESGYLKSA 645



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 159/354 (44%), Gaps = 23/354 (6%)

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           ++L R+ +SK  PN   +G +I    ++G   +   V   M+           + ++ GL
Sbjct: 114 NVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVLP---AMQACNMVLDGL 168

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K+G+ +   K++  M+ +G  PN V Y  LIDG CR G   +A  +  EMI        
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             Y+ L++G     +  +A  +++ M  +  + N   Y+ ++ G C+   +++A  ++ +
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQE 288

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           ML  G  P+VV +  +I GLC    +  A K   +M        P++F YN L++  CK 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF--GVVPNIFVYNCLIDGYCKA 346

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF------ 611
            N+S ++ L + +      PD+ T +I +  L   ++  ++    L E+  + F      
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLC-GVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 612 ---------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                    K        ++   M +K + P   T+  ++   C+  +++AA+ 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 17/246 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y   G+ +    V  +M  +       +F  +   Y KA  +E A+ L+  M
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +      V ++ ++++   ++G    A   +  +  A    + PN  T + +I  +C+
Sbjct: 465 VIKGLLPDVV-AYTALIDGHFKDGNTKEAFRLHKEMQEA---GLHPNVFTLSCLIDGLCK 520

Query: 205 LGLVDNAIQLF-------------REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            G + +AI+LF              E+    C P+   Y  L+ GLC + R+ +A     
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           +M+  G  P   T  V+I G  +   L     L  ++   G +PN   Y  L  G    G
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640

Query: 312 NLDKAV 317
            L  A+
Sbjct: 641 YLKSAL 646


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 141/417 (33%), Positives = 217/417 (52%), Gaps = 8/417 (1%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K T   F  ++    + GL   AL  Y        M++LP     N+V+  + + G  D 
Sbjct: 123 KFTPNVFGVLIIAFSEMGLVEEALWVY------YKMDVLPAMQACNMVLDGLVKKGRFDT 176

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
             +++ +M  R   P++ TY TL+DG C++    +A  L DEM     FPT V + +LI 
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLC    +  A  +   M   G LPN  TYNT++ G C   ++ KA+ L   M+    +P
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLP 296

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N VT+G +I+GL K    V   + L+ M       N ++Y+ LI G  K G   +A+ L 
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            ++ +    P+   YS LI GLC V + +EA+ +L EM   G   NA TY++L+ G+ + 
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G   KA+E+   M +     N + +S LI G C+ GK+  A  ++T+M+ +G  PDVVAY
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           +++I G    G+ +EA +L  EM   E    P+VFT + L++ LCK   IS +I L 
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEM--QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/421 (30%), Positives = 214/421 (50%), Gaps = 7/421 (1%)

Query: 110 RREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL 169
           R E        F  +  A+ +  LVEEA+ +++ M         +++ N VL+ ++++G 
Sbjct: 118 RLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM----DVLPAMQACNMVLDGLVKKGR 173

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           +    + Y  +V A+  +  PN +T+  +I   CR G    A +LF EM  +   P +  
Sbjct: 174 FDTMWKVYGDMV-ARGAS--PNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVI 230

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  L+ GLC E+R+ EA  +   M+  G  P   T+N +++G CK   + +A +L   M 
Sbjct: 231 YTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML 290

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             G LPN VT+  LI GLC    +  A   L  M +   +PN   Y  +I+G  K G   
Sbjct: 291 GDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLS 350

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +   +   +E+ +   + + YS LI GL    + E+A  L ++M +KG  PN V Y+ LI
Sbjct: 351 EALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLI 410

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG C+ G  ++A E+  +M   G   N  T+S+L+ G+ ++GK   A+ ++ +M     +
Sbjct: 411 DGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLL 470

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + V Y+ LI G  +DG  +EA  +  +M   G  P+V   S +I GLC  G + +A+KL
Sbjct: 471 PDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKL 530

Query: 530 F 530
           F
Sbjct: 531 F 531



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 190/412 (46%), Gaps = 25/412 (6%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           TP  F VLI    + G +  A  +   M     LP     N ++ GL  KG  D    + 
Sbjct: 125 TPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKVY 181

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             MVA    PN VTYGT+I+G  + G  +   R+   M E+K      IY+ LI GL  E
Sbjct: 182 GDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGE 241

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            +  +A  +++ M   G  PN   Y+ ++DG C++    +A E+  EM+ +G   N  T+
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTF 301

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
             L+ G  ++ +   A +   DMA    V N   Y+ LI G C+ G L EA  + +++  
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
               PDV  YS +I GLC    +EEA  L  EM   +    P+  TYN L++  CK+ N+
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK--KKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIR--------- 609
             +I++ + M ++G +P+++T +  +       K+EA         E+ I+         
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEA---AMGLYTEMVIKGLLPDVVAY 476

Query: 610 ------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  FK   T   F++ + M +  L P   T   ++  LC+  RI  AI
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAI 528



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 197/443 (44%), Gaps = 48/443 (10%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N +++   + G    AL  ++ I   KH  ILP+  T++++IK +C +  ++ A  L +
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEI--EKH-EILPDVFTYSILIKGLCGVDRMEEADGLLQ 392

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM  +   P+  TY TL+DG CKE  +++A+ +  +M   G  P  +TF+ LI+G CK G
Sbjct: 393 EMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAG 452

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           ++  A  L   M +KG LP+ V Y  LI G    GN  +A  L   M  +   PN  T  
Sbjct: 453 KMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLS 512

Query: 337 TIINGLVKLGRAVDGARVLMS---MEERKFHVNE-----YIYSTLISGLFKEGKAEDAMK 388
            +I+GL K GR  D  ++ ++    +      NE     Y   +L   LF+ G +E  + 
Sbjct: 513 CLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFR-GISEPCIC 571

Query: 389 LWK--QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           + +  ++     +P   +++ L        KP ++ + L                   K 
Sbjct: 572 VIRVTKLFATNNQPKAHLHTHL--------KPPKSNQTL-------------------KR 604

Query: 447 FFESGKGHKAVEIWKD-MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           + +S    K +  ++  + KN    +       +        L E + +   +++ G +P
Sbjct: 605 YLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEP 664

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
            +   +S+I      G+V +A  +F+E+         ++ ++  +++A       + ++ 
Sbjct: 665 IIFLQTSLISMYSATGNVADAHNMFDEI------PSKNLISWTSVISAYVDNQRPNKALQ 718

Query: 566 LLNSMMDRGCDPDLVTCNIFLTA 588
           L   M      PD+VT  + L+A
Sbjct: 719 LFRQMQMDDVQPDIVTVTVALSA 741



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 126/316 (39%), Gaps = 23/316 (7%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG-KAHLVEEAIRLFHTMVD 146
           +L ++  +S   K L      +R+    +   S +F  KA   K+ LVE   +  H +V 
Sbjct: 601 TLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEG--KQMHALVI 658

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
            F  +  +    S++++    G    A   ++ I +        N +++  VI       
Sbjct: 659 NFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK-------NLISWTSVISAYVDNQ 711

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
             + A+QLFR+M + + +PDI T    +        LD    +   ++  G        N
Sbjct: 712 RPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNN 771

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
            LIN   K GE+G A +          LPN+VT+  ++      G +++       M   
Sbjct: 772 SLINMYSKCGEIGTARR------FSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKED 825

Query: 327 KCM-PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
             + P    +G +++ L + G   +    ++ M  R    N  ++ TL+     +G  + 
Sbjct: 826 YSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVRP---NAVVWRTLLGACSLQGMWDK 882

Query: 386 AMKLWKQMMEK---GC 398
            M +  Q+ ++   GC
Sbjct: 883 KMLVRNQIKQRRDPGC 898


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 246/464 (53%), Gaps = 9/464 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K+  +E+A     TM +     + V  ++ ++ ++I+ G   +A E    I      NI 
Sbjct: 317 KSGKIEQAFEACRTMQESLSSSQPV--YDMLIRLLIESGRIDKAEEACLEIAG---RNIQ 371

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P++ T + VI+ +C+ G VD+A+ L   M  R   PD+ T+  L++ LCK +++ EA   
Sbjct: 372 PSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEF 431

Query: 250 LDEM--QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL-KGCLPNEVTYNTLIHG 306
           L  M  ++     +  ++N L+N LCK  ++ +A  +   M   +  +P+ V+Y+ LI G
Sbjct: 432 LQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDG 491

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C    L +A  L  +M+   C+PN  TY   +NGL++ GR  D   V   M       +
Sbjct: 492 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPD 551

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              YSTLI G     K + A +L++ M+ +GC+PN V Y+ L+ GLC+  KPDEA E+  
Sbjct: 552 VITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 611

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +M+  GC  +  TY++L+ GF   GK  +AVE++ +M       + V Y+ L+ G    G
Sbjct: 612 KMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 671

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K  EA+ ++  M+SR CKPD V+++ MI GL  A  +++A+++F  M   +    PD+ T
Sbjct: 672 KPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERME-QDHGCSPDLVT 730

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           YN L+  LC +  +S ++ +   +      PD    N+ L A+K
Sbjct: 731 YNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAIK 774



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 171/599 (28%), Positives = 268/599 (44%), Gaps = 109/599 (18%)

Query: 135 EEAIRLFHTMVDE-FHCKRTV-KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           +EA+R F  MVD+ F    T+ +     L    +EG + R          A  M +L   
Sbjct: 181 DEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEM-MLKKA 239

Query: 193 LTFNLVIKTVCRLGLVDNAIQ---LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           L  N VI+        D AI+   LFR M    C+PD   Y  ++   CK   LDEA  L
Sbjct: 240 LLVNFVIQ--------DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKL 291

Query: 250 LDEMQVDGCFP-TPVTFNVLINGLCKNGELGRA-------------AKLVDNMFLK---- 291
             EM V+   P   V +   ++GLCK+G++ +A             ++ V +M ++    
Sbjct: 292 FLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIE 351

Query: 292 ---------GCL--------PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
                     CL        P+  T +++I  LC  G +D A+SLL+ M+     P+  T
Sbjct: 352 SGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMAT 411

Query: 335 YGTIINGLVKLGRAVDGARVLMSME----------------------------------- 359
           +  +IN L K  +  +    L  M+                                   
Sbjct: 412 HSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFST 471

Query: 360 ---ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
              ER F  +   YS LI G  K  +   A KL+KQM++  C PN   Y+A ++GL R G
Sbjct: 472 MVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKG 531

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           +  +A+ +  EM+  GC+ +  TYS+L+ GF  + K  +A E+++ M    C  N V Y+
Sbjct: 532 RIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYN 591

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            L+HGLC++ K  EA  ++ +M+ RGC PD V Y+++++G CN G +E+A+++F+EM+  
Sbjct: 592 CLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMV-- 649

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                PDV  YN LL    +      +  L   M+ R C PD V+ NI +  L  K +  
Sbjct: 650 SKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGL-SKAKRL 708

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            D        A+ +F+R     G            SP   T+  ++  LC  +R+  A+
Sbjct: 709 DD--------AVEVFERMEQDHG-----------CSPDLVTYNSLIFGLCGEQRLSEAM 748



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 150/605 (24%), Positives = 250/605 (41%), Gaps = 127/605 (20%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL F+  +   +  N   +  T+N ++  + R   +  A Q+F +M  +   P+ +TY  
Sbjct: 113 ALTFFRWL---QARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAV 169

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL---INGLCKNGELGR--------- 280
           L+   C E   DEAV    EM   G  P+   +  +   +    K GE  R         
Sbjct: 170 LVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKR 229

Query: 281 -----------------------AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
                                  A+KL   M   GC P+   Y+ ++   C   NLD+A 
Sbjct: 230 VAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAF 289

Query: 318 SL-LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE---------------- 360
            L L+  V SK   N V +   ++GL K G+         +M+E                
Sbjct: 290 KLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLL 349

Query: 361 ------------------RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
                             R    +     ++I  L K G+ + A+ L + M+++G  P+ 
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDM 409

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEM-----------------INNGCAA---------- 435
             +S LI+ LC+  K  EA+E L  M                 +N+ C A          
Sbjct: 410 ATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIF 469

Query: 436 -----------NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
                      +  +YS L+ GF +  +  +A +++K M   NCV N   Y+  ++GL  
Sbjct: 470 STMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMR 529

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G++ +A+ V+ +M++ GC PDV+ YS++IHG   A   ++A +LF  M  +    +P+ 
Sbjct: 530 KGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETM--ISRGCRPNA 587

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT--------CNI--FLTALKEKLE 594
            TYN LL+ LCK+S    + +L   M++RGCDPD VT        CN+     A++   E
Sbjct: 588 VTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDE 647

Query: 595 APQDGTD----FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
               G D      N L    F+  +     ++ +VM+ +   P T +   ++  L + KR
Sbjct: 648 MVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKR 707

Query: 651 IQAAI 655
           +  A+
Sbjct: 708 LDDAV 712



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/321 (22%), Positives = 133/321 (41%), Gaps = 55/321 (17%)

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+  ++ +  +  K +   Y+ L+D L R     +A ++  +M+  G   N FTY+ L+
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLV 171

Query: 445 ---------------------KGFFESGKGHKAVE---------------IWKDMAKNNC 468
                                KGF  S   ++ V                  +D+ K   
Sbjct: 172 QSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVA 231

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           V   +  ++L++ + +D K  EA  ++  M+  GCKPD   YS M+   C   +++EA K
Sbjct: 232 VEMMLKKALLVNFVIQD-KAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFK 290

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD--RGCDP--DLVTCNI 584
           LF EM  +E K+  +   +   L+ LCK   I  + +   +M +      P  D++   +
Sbjct: 291 LFLEM-AVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLL 349

Query: 585 FLTALKEKLE-----------APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
             +   +K E            P  GT   + +   L K  R      ++E M+++   P
Sbjct: 350 IESGRIDKAEEACLEIAGRNIQPSSGT--CHSVIQELCKAGRVDSALSLLETMIKRGYCP 407

Query: 634 QTSTWERVVQELCRPKRIQAA 654
             +T   ++ ELC+  +IQ A
Sbjct: 408 DMATHSMLINELCKADKIQEA 428



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 53/255 (20%), Positives = 98/255 (38%), Gaps = 51/255 (20%)

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
           G +A+  ++ +   N  ++   Y+ L+  L     L++A  V+ +M+++G  P+   Y+ 
Sbjct: 110 GGEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAV 169

Query: 513 MIHGLCNAGSVEEALKLFNEML----------------CLEPKSQPDVFTY--------- 547
           ++   C   + +EA++ F EM+                CL+   +   F+          
Sbjct: 170 LVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKR 229

Query: 548 ---------NILLNALCKQSNISHSIDLLNSMMDRGCDPD--------LVTCNI--FLTA 588
                     +L+N + +   I  S  L  +M+  GC PD        L  C +     A
Sbjct: 230 VAVEMMLKKALLVNFVIQDKAIEAS-KLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEA 288

Query: 589 LKEKLEAPQDGTDFLNELAIRLF-----KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
            K  LE   +    LN +A   F     K  +    F+    M Q+ LS     ++ +++
Sbjct: 289 FKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIR 347

Query: 644 ELCRPKRIQAAINKC 658
            L    RI  A   C
Sbjct: 348 LLIESGRIDKAEEAC 362


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 157/481 (32%), Positives = 240/481 (49%), Gaps = 30/481 (6%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K T   F  ++    + GL   AL  Y        M++LP     N+V+  + + G  D 
Sbjct: 123 KFTPNVFGVLIIAFSEMGLVEEALWVY------YKMDVLPAMQACNMVLDGLVKKGRFDT 176

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
             +++ +M  R   P++ TY TL+DG C++    +A  L DEM     FPT V + +LI 
Sbjct: 177 MWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIR 236

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLC    +  A  +   M   G LPN  TYNT++ G C   ++ KA+ L   M+    +P
Sbjct: 237 GLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLP 296

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N VT+G +I+GL K    V   + L+ M       N ++Y+ LI G  K G   +A+ L 
Sbjct: 297 NVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLH 356

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            ++ +    P+   YS LI GLC V + +EA+ +L EM   G   NA TY++L+ G+ + 
Sbjct: 357 SEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKE 416

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G   KA+E+   M +     N + +S LI G C+ GK+  A  ++T+M+ +G  PDVVAY
Sbjct: 417 GNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAY 476

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL--- 567
           +++I G    G+ +EA +L  EM   E    P+VFT + L++ LCK   IS +I L    
Sbjct: 477 TALIDGHFKDGNTKEAFRLHKEM--QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAK 534

Query: 568 ---------NSMMDRG-CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
                     + +DR  C P+    ++  TAL + L    DG  F    A + F   R S
Sbjct: 535 TGTDTTGSKTNELDRSLCSPN----HVMYTALIQGL--CTDGRIF---KASKFFSDMRCS 585

Query: 618 G 618
           G
Sbjct: 586 G 586



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 233/482 (48%), Gaps = 28/482 (5%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  +  A+ +  LVEEA+ +++ M         +++ N VL+ ++++G +    + Y  +
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKM----DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDM 184

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V        PN +T+  +I   CR G    A +LF EM  +   P +  Y  L+ GLC E
Sbjct: 185 VAR---GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGE 241

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +R+ EA  +   M+  G  P   T+N +++G CK   + +A +L   M   G LPN VT+
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTF 301

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
             LI GLC    +  A   L  M +   +PN   Y  +I+G  K G   +   +   +E+
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
            +   + + YS LI GL    + E+A  L ++M +KG  PN V Y+ LIDG C+ G  ++
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A E+  +M   G   N  T+S+L+ G+ ++GK   A+ ++ +M     + + V Y+ LI 
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF---------- 530
           G  +DG  +EA  +  +M   G  P+V   S +I GLC  G + +A+KLF          
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTG 541

Query: 531 ---NEM---LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
              NE+   LC      P+   Y  L+  LC    I  +    + M   G  PD+ TC +
Sbjct: 542 SKTNELDRSLC-----SPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIV 596

Query: 585 FL 586
            +
Sbjct: 597 II 598



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 143/514 (27%), Positives = 239/514 (46%), Gaps = 55/514 (10%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +FN   +L S +   + F  LI  ++  G  +    V Y+M     +   ++   +    
Sbjct: 112 VFNVLSRLESSKFTPNVFGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGL 168

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            K    +   +++  MV        V ++ ++++   ++G + +A   ++ ++  K   I
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVV-TYGTLIDGCCRQGDFLKAFRLFDEMIEKK---I 224

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P  + + ++I+ +C    +  A  +FR M      P++YTY T+MDG CK   + +A+ 
Sbjct: 225 FPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALE 284

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L  EM  DG  P  VTF +LI+GLCK  E+  A K + +M   G +PN   YN LI G C
Sbjct: 285 LYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYC 344

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             GNL +A+SL   +   + +P+  TY  +I GL  + R  +   +L  M+++ F  N  
Sbjct: 345 KAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAV 404

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+TLI G  KEG  E A+++  QM EKG +PN + +S LIDG C+ GK + A  +  EM
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM------------------------- 463
           +  G   +   Y++L+ G F+ G   +A  + K+M                         
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 464 -----------------AKNN------CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
                            +K N      C  N V Y+ LI GLC DG++ +A   ++ M  
Sbjct: 525 SDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRC 584

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
            G +PDV     +I G   A  + + + L  ++L
Sbjct: 585 SGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADIL 618



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 190/381 (49%), Gaps = 17/381 (4%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y K   V++A+ L+  M+ +      V +F  +++ + +      A +F   +++ 
Sbjct: 269 MMDGYCKIAHVKKALELYXEMLGDGLLPNVV-TFGILIDGLCKTDEMVSARKF---LIDM 324

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               ++PN   +N +I   C+ G +  A+ L  E+      PD++TY  L+ GLC  +R+
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA  LL EM+  G  P  VT+N LI+G CK G + +A ++   M  KG  PN +T++TL
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C  G ++ A+ L   MV    +P+ V Y  +I+G  K G   +  R+   M+E   
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLW-------------KQMMEKGCKPNTVVYSALID 410
           H N +  S LI GL K+G+  DA+KL+              ++    C PN V+Y+ALI 
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC  G+  +A +   +M  +G   + FT   +++G F +      + +  D+ K   + 
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624

Query: 471 NEVCYSVLIHGLCEDGKLREA 491
           N   Y VL  G  E G L+ A
Sbjct: 625 NSSVYRVLAKGYEESGYLKSA 645



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 159/354 (44%), Gaps = 23/354 (6%)

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           ++L R+ +SK  PN   +G +I    ++G   +   V   M+           + ++ GL
Sbjct: 114 NVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVLP---AMQACNMVLDGL 168

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K+G+ +   K++  M+ +G  PN V Y  LIDG CR G   +A  +  EMI        
Sbjct: 169 VKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTV 228

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             Y+ L++G     +  +A  +++ M  +  + N   Y+ ++ G C+   +++A  ++ +
Sbjct: 229 VIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXE 288

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           ML  G  P+VV +  +I GLC    +  A K   +M        P++F YN L++  CK 
Sbjct: 289 MLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF--GVVPNIFVYNCLIDGYCKA 346

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF------ 611
            N+S ++ L + +      PD+ T +I +  L   ++  ++    L E+  + F      
Sbjct: 347 GNLSEALSLHSEIEKHEILPDVFTYSILIKGLC-GVDRMEEADGLLQEMKKKGFLPNAVT 405

Query: 612 ---------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                    K        ++   M +K + P   T+  ++   C+  +++AA+ 
Sbjct: 406 YNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 112/552 (20%), Positives = 214/552 (38%), Gaps = 61/552 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y   G+ +    V  +M  +       +F  +   Y KA  +E A+ L+  M
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +      V ++ ++++   ++G    A   +  +  A    + PN  T + +I  +C+
Sbjct: 465 VIKGLLPDVV-AYTALIDGHFKDGNTKEAFRLHKEMQEA---GLHPNVFTLSCLIDGLCK 520

Query: 205 LGLVDNAIQLF-------------REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            G + +AI+LF              E+    C P+   Y  L+ GLC + R+ +A     
Sbjct: 521 DGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFS 580

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           +M+  G  P   T  V+I G  +   L     L  ++   G +PN   Y  L  G    G
Sbjct: 581 DMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESG 640

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGT-IINGLVKLGRAVDG----ARVLMSMEERKFHVN 366
            L  A+S     V      N   +G+  I    +L    +     +  L +     F + 
Sbjct: 641 YLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLL 700

Query: 367 EYIYSTL-------------ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
            Y ++ L               G   + +   A++L++QM     +P+ V  +  +    
Sbjct: 701 WYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACA 760

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
            +G  D  E I   + + G   +    +SL+  + + G+   A  ++    K +      
Sbjct: 761 DLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDV----T 816

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCK----------------PDVVAYSSMIHGL 517
            ++ +I G    G+  EA  ++T+M     +                P+ V +  ++   
Sbjct: 817 TWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMAC 876

Query: 518 CNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            +AG VEE  + F  M   E  S +P +  +  +++ LC+   ++ + + +  M  R   
Sbjct: 877 SHAGLVEEGKQHFRSM--KEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMPVR--- 931

Query: 577 PDLVTCNIFLTA 588
           P+ V     L A
Sbjct: 932 PNAVVWRTLLGA 943



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 27/223 (12%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           + A+QLFR+M + + +PDI T    +        LD    +   ++  G        N L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV---- 324
           IN   K GE+G A +L D    K    +  T+ ++I G  L G  ++A+ L   M     
Sbjct: 791 INMYSKCGEIGTARRLFDGTQKK----DVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 325 ------------ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI--Y 370
                       +S  +PN+VT+  ++      G   +G +   SM+E  + +   I  +
Sbjct: 847 RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKE-DYSLRPRISHF 905

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
             ++  L + G   +A   ++ +++   +PN VV+  L+ G C
Sbjct: 906 GCMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLL-GAC 944


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 141/435 (32%), Positives = 225/435 (51%), Gaps = 38/435 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA+RL   +   F C   V S+N+VL  +     + R  +    +V    +   PN +
Sbjct: 205 VDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMV---RVGCPPNVV 261

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN +I  +CR GL +   Q+  +M    C PDI  Y T++DG+CKE  L+ A  +LD M
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 254 QVDG------CFPT-----------------------------PVTFNVLINGLCKNGEL 278
              G      C+ T                              VTFN+L++  C+NG +
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLV 381

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
            R  +L++ M   GC+P+ +TY T+I+G C +G +D+AV LL  M A  C PN ++Y  +
Sbjct: 382 YRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIV 441

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           + GL    R VD   ++  M E+    N   ++T+I+ L K+G  E A++L KQM+  GC
Sbjct: 442 LKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGC 501

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ + YS +IDGL + GK DEA E+L  M+N G + N   YSS+     + G+ ++ ++
Sbjct: 502 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQ 561

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++ ++       + V Y+ +I  LC+ G    A      M+S GC P+   Y+ +I GL 
Sbjct: 562 MFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLA 621

Query: 519 NAGSVEEALKLFNEM 533
           + G V+EA ++  E+
Sbjct: 622 SEGFVKEAQEMLTEL 636



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 139/492 (28%), Positives = 254/492 (51%), Gaps = 28/492 (5%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +  +    A  + + PN  T+  V++ +C  G + +A+ +  EM  R C P    
Sbjct: 93  YCRAGQLASARRLAASVPVPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPM 152

Query: 230 YCTLMDGLCKE---NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC-KNGELGRAAKLV 285
           Y  +++  C          AV +L ++   GC       N+++N +C + G +  A +L+
Sbjct: 153 YHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLL 212

Query: 286 DNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
            ++    GC P+ V+YN ++ GLC+     +   L++ MV   C PN VT+ T+I  L +
Sbjct: 213 RDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCR 272

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G      +VL  M +     +  +Y+T++ G+ KEG  E A ++  +M   G KPN V 
Sbjct: 273 NGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVC 332

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ ++ GLC   + ++AEE+L EM +N C  +  T++ L+  F ++G  ++ +E+ + M 
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML 392

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           ++ CV + + Y+ +I+G C++G + EA M+   M + GC+P+ ++Y+ ++ GLC+A    
Sbjct: 393 EHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWV 452

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           +A  L ++M  +E    P+  T+N ++N LCK+  +  +I+LL  M+  GC PDL++ + 
Sbjct: 453 DAEDLMSQM--IEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYST 510

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            +           DG          L K  +T    +++ VM+ K +SP T  +  +   
Sbjct: 511 VI-----------DG----------LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASA 549

Query: 645 LCRPKRIQAAIN 656
           L +  RI   I 
Sbjct: 550 LSKEGRINRVIQ 561



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 232/463 (50%), Gaps = 36/463 (7%)

Query: 196 NLVIKTVC-RLGLVDNAIQLFREMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           NLV+  VC + G VD A++L R++P    C+PD+ +Y  ++ GLC   R      L++EM
Sbjct: 192 NLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEM 251

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              GC P  VTFN LI  LC+NG   R  +++  M   GC P+   Y T++ G+C +G+L
Sbjct: 252 VRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHL 311

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           + A  +LDRM +    PN V Y T++ GL    R      +L  M +    +++  ++ L
Sbjct: 312 EVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNIL 371

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +    + G     ++L +QM+E GC P+ + Y+ +I+G C+ G  DEA  +L  M   GC
Sbjct: 372 VDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGC 431

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  +Y+ ++KG   + +   A ++   M +  C  N V ++ +I+ LC+ G + +A  
Sbjct: 432 RPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIE 491

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKS----------- 540
           +  QML  GC PD+++YS++I GL  AG  +EAL+L N M+   + P +           
Sbjct: 492 LLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALS 551

Query: 541 --------------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
                               + D   YN ++++LCK+     +I+ L  M+  GC P+  
Sbjct: 552 KEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNES 611

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
           T  I +  L  +    ++  + L EL  +   R+     F IV
Sbjct: 612 TYTILIRGLASE-GFVKEAQEMLTELCSKGALRKHFMKHFGIV 653



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 202/380 (53%), Gaps = 6/380 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI +   +G F+ +  VL +M         + +  +     K   +E A  +   M
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP-NTLTFNLVIKTVC 203
              +  K  V  +N+VL  +     + +A E    + +    N  P + +TFN+++   C
Sbjct: 322 -PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFD----NDCPLDDVTFNILVDFFC 376

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + GLV   I+L  +M    C PD+ TY T+++G CKE  +DEAV+LL  M   GC P  +
Sbjct: 377 QNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTI 436

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           ++ +++ GLC       A  L+  M  +GC PN VT+NT+I+ LC KG +++A+ LL +M
Sbjct: 437 SYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQM 496

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           + + C P+ ++Y T+I+GL K G+  +   +L  M  +    N  IYS++ S L KEG+ 
Sbjct: 497 LLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRI 556

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
              ++++  + +   + + V+Y+A+I  LC+ G  D A E L  M+++GC  N  TY+ L
Sbjct: 557 NRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTIL 616

Query: 444 MKGFFESGKGHKAVEIWKDM 463
           ++G    G   +A E+  ++
Sbjct: 617 IRGLASEGFVKEAQEMLTEL 636



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 163/309 (52%), Gaps = 4/309 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K    A   E+A  L   M D   C     +FN +++   Q GL +R +E    ++  
Sbjct: 336 VLKGLCSAERWEQAEELLAEMFDN-DCPLDDVTFNILVDFFCQNGLVYRVIELLEQML-- 392

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +H   +P+ +T+  VI   C+ GL+D A+ L + M    C P+  +Y  ++ GLC   R 
Sbjct: 393 EH-GCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERW 451

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +A  L+ +M   GC P PVTFN +IN LCK G + +A +L+  M L GC P+ ++Y+T+
Sbjct: 452 VDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTV 511

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I GL   G  D+A+ LL+ MV     PN + Y +I + L K GR     ++  ++++   
Sbjct: 512 IDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTI 571

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +  +Y+ +IS L K G  + A++    M+  GC PN   Y+ LI GL   G   EA+E
Sbjct: 572 RSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQE 631

Query: 424 ILFEMINNG 432
           +L E+ + G
Sbjct: 632 MLTELCSKG 640



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 120/301 (39%), Gaps = 56/301 (18%)

Query: 406 SALIDGLCRVGKPDEAEEILF--------------EMINNGCAA---------------- 435
           SALI  LC  G+  EA   L                M++  C A                
Sbjct: 53  SALIRSLCAAGRTAEAARALSAAAARGGAGVVAYNAMVSGYCRAGQLASARRLAASVPVP 112

Query: 436 -NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE---DGKLREA 491
            NA+TY  +++     G+   A+ +  +M +  C      Y V++   C     G  R A
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCN-AGSVEEALKLFNEMLCLEPKS---QPDVFTY 547
             V   +  RGC  DV   + +++ +C+  GSV+EAL+L  ++    P S    PDV +Y
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDL----PTSFGCDPDVVSY 228

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL-----TALKEKL-EAPQDGTD 601
           N +L  LC         DL+  M+  GC P++VT N  +       L E++ +      D
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288

Query: 602 FLNELAIRLF--------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                 IR++        K        +I++ M    L P    +  V++ LC  +R + 
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348

Query: 654 A 654
           A
Sbjct: 349 A 349


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 167/601 (27%), Positives = 280/601 (46%), Gaps = 91/601 (15%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           S + +   + K++ +++A   F  +   F   K  +  +N +L   I+E    R +EF +
Sbjct: 77  SLLSVVSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRE----RRVEFVS 132

Query: 179 HIVNAKHM-NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
            +     +  I P T TFNL+I+ +C    VD A +LF EMP + C+P+ +T+  L+ G 
Sbjct: 133 WLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY 192

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CK    D+ + LL+ M+  G  P  V +N +++  C+ G    + KLV+ M  +G +P+ 
Sbjct: 193 CKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDI 252

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM----PNEVTYGTIINGLVKLGRAVDGAR 353
           VT+N+ I  LC +G +  A  +   M   + +    PN +TY  ++ G  K+G   D   
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +  S+ E    V+   Y+  + GL + GK  +A  + KQM++KG  P+   Y+ L+DGLC
Sbjct: 313 LFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLC 372

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           ++G   +A+ I+  M  NG + +A TY  L+ G+   GK   A  + ++M +NNC+ N  
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432

Query: 474 CYSVLIH-----------------------------------GLCEDGKLREA------- 491
             ++L+H                                   GLC  G+L +A       
Sbjct: 433 TCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492

Query: 492 ----------------RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
                            +V   ++   C PD++ YS++++GLC AG   EA  LF EM+ 
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMM- 551

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
              K QPD   YNI ++  CKQ  IS +  +L  M  +GC   L T N  +  L  K + 
Sbjct: 552 -GEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQ- 609

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                         +F+         +++ M +K +SP   T+   +Q LC   +++ A 
Sbjct: 610 --------------IFEIH------GLMDEMREKGISPNICTYNTAIQYLCEGGKVEDAT 649

Query: 656 N 656
           N
Sbjct: 650 N 650



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 258/516 (50%), Gaps = 34/516 (6%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSG-DFKSLEMVLYRMRREKRVVLEKSFIF--I 124
           E+F+  P+ G  +  + TF  L++ Y  +G   K LE++      E   VL    ++  I
Sbjct: 168 ELFDEMPEKGC-KPNEFTFGILVRGYCKAGLTDKGLELL---NSMESFGVLPNKVVYNTI 223

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             ++ +    +++ +L   M +E      V +FNS ++ + +EG    A   ++ +   +
Sbjct: 224 VSSFCREGRNDDSEKLVEKMREEGLVPDIV-TFNSRISALCKEGKVLDASRIFSDMELDE 282

Query: 185 HMNI-LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           ++ +  PN++T+NL++K  C++GL+++A  LF  +   +    + +Y   + GL +  + 
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKF 342

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  +L +M   G  P+  ++N+L++GLCK G L  A  +V  M   G  P+ VTY  L
Sbjct: 343 IEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCL 402

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +HG C  G +D A SLL  M+ + C+PN  T   +++ L  +GR  +   +L  M E+ +
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGY 462

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQM-----------------------MEKGCKP 400
            ++    + ++ GL   G+ + A+++ K M                       +E  C P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + + YS L++GLC+ G+  EA+ +  EM+      ++  Y+  +  F + GK   A  + 
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVL 582

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           KDM K  C  +   Y+ LI GL    ++ E   +  +M  +G  P++  Y++ I  LC  
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEG 642

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           G VE+A  L +EM  ++    P+VF++  L+ A CK
Sbjct: 643 GKVEDATNLLDEM--MQKNIAPNVFSFKYLIGAFCK 676



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 147/536 (27%), Positives = 257/536 (47%), Gaps = 37/536 (6%)

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           R+F +  +E H   ++ +  ++  ++++  ++    E +N I+++       ++L    V
Sbjct: 25  RIFSSPSEESH-GISLAATPTMACILVRAKMHEEIEELHNLILSSSIQKTKLSSLLS--V 81

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           +    +   +D A   F+ +  R  E  P IY Y  L++   +E R++    L  +M + 
Sbjct: 82  VSIFAKSNHIDKAFPQFQFVRSRFPENKPGIYLYNVLLESCIRERRVEFVSWLYKDMVLC 141

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P   TFN+LI  LC +  +  A +L D M  KGC PNE T+  L+ G C  G  DK 
Sbjct: 142 GISPETYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           + LL+ M +   +PN+V Y TI++   + GR  D  +++  M E     +   +++ IS 
Sbjct: 202 LELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISA 261

Query: 377 LFKEGKAEDAMKLWKQMMEKGC----KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L KEGK  DA +++  M         +PN++ Y+ ++ G C+VG  ++A+ +   +  N 
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              +  +Y+  ++G    GK  +A  + K M       +   Y++L+ GLC+ G L +A+
Sbjct: 322 DLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAK 381

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNI 549
            +   M   G  PD V Y  ++HG C+ G V+ A  L  EM+   CL     P+ +T NI
Sbjct: 382 TIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL-----PNAYTCNI 436

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           LL++L     IS + +LL  M ++G   D VTCNI +  L         G+  L++ AI 
Sbjct: 437 LLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC--------GSGELDK-AIE 487

Query: 610 LFKRQRTSGGFK-----------IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           + K  R  G              + + +++    P   T+  ++  LC+  R   A
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEA 543



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 126/546 (23%), Positives = 215/546 (39%), Gaps = 135/546 (24%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK----SFIFIFKAYGKAHLVEEAIRL 140
           TF S I      G       +   M  ++ + L +    ++  + K + K  L+E+A  L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F + + E     +++S+N  L  +++ G +  A      +++     I P+  ++N+++ 
Sbjct: 314 FES-IRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDK---GIGPSIYSYNILMD 369

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+LG++ +A  +   M      PD  TY  L+ G C   ++D A  LL EM  + C P
Sbjct: 370 GLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP 429

Query: 261 TP-----------------------------------VTFNVLINGLCKNGELGRAAKLV 285
                                                VT N++++GLC +GEL +A ++V
Sbjct: 430 NAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489

Query: 286 DNMFLKG-----------------------CLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             M + G                       CLP+ +TY+TL++GLC  G   +A +L   
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAE 549

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+  K  P+ + Y   I+   K G+     RVL  ME++  H +   Y++LI GL  + +
Sbjct: 550 MMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQ 609

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT--- 439
             +   L  +M EKG  PN   Y+  I  LC  GK ++A  +L EM+    A N F+   
Sbjct: 610 IFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKY 669

Query: 440 -------------------------------YSSLMKGFFESGKGHKAVEI--------- 459
                                          YS +      +G+  KA E+         
Sbjct: 670 LIGAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGF 729

Query: 460 ------WKDMAKNNCVYNE--VCYSVL------------------IHGLCEDGKLREARM 493
                 +KD+  + C  +E  V   +L                  I GL + G  +EA  
Sbjct: 730 ELGTFLYKDLVVSLCKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANN 789

Query: 494 VWTQML 499
              +M+
Sbjct: 790 FAEKMM 795



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 151/302 (50%), Gaps = 7/302 (2%)

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           I L    + E +C   + +++++LN + + G +  A   +  ++  K   + P++L +N+
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEK---LQPDSLAYNI 564

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
            I   C+ G + +A ++ ++M  + C   + TY +L+ GL  +N++ E   L+DEM+  G
Sbjct: 565 FIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKG 624

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P   T+N  I  LC+ G++  A  L+D M  K   PN  ++  LI   C   + D A 
Sbjct: 625 ISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQ 684

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            + +  V S C   E  Y  + N L+  G+ +    +L ++ +R F +  ++Y  L+  L
Sbjct: 685 EVFETAV-SICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSL 743

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE---EILFEMINNGCA 434
            K+ + E A  +  +M++KG   +      +IDGL ++G   EA    E + EM + G  
Sbjct: 744 CKKDELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEV 803

Query: 435 AN 436
           AN
Sbjct: 804 AN 805


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 160/578 (27%), Positives = 283/578 (48%), Gaps = 45/578 (7%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           S + +   + K++ +++A   F  +   F   K +V  +N +L   I+E    R +EF +
Sbjct: 77  SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKE----RRVEFVS 132

Query: 179 HIVNAKHM-NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
            +     +  I P T TFNL+I+ +C    VD A +LF EMP + C+P+ +T+  L+ G 
Sbjct: 133 WLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY 192

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CK    D+ + LL+ M+  G  P  V +N +++  C+ G    + K+V+ M  +G +P+ 
Sbjct: 193 CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDI 252

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM----PNEVTYGTIINGLVKLGRAVDGAR 353
           VT+N+ I  LC +G +  A  +   M   + +    PN +TY  ++ G  K+G   D   
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +  S+ E     +   Y+  + GL + GK  +A  + KQM +KG  P+   Y+ L+DGLC
Sbjct: 313 LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           ++G   +A+ I+  M  NG   +A TY  L+ G+   GK   A  + ++M +NNC+ N  
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             ++L+H L + G++ EA  +  +M  +G   D V  + ++ GLC +G +++A+++   M
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492

Query: 534 LC---------------------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
                                  +E    PD+ TY+ LLN LCK    + + +L   MM 
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552

Query: 573 RGCDPDLVTCNIFL----------TALKEKLEAPQDG----TDFLNELAIRLFKRQRTSG 618
               PD V  NIF+          +A +   +  + G     +  N L + L  + +   
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              +++ M +K +SP   T+   +Q LC  ++++ A N
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 258/516 (50%), Gaps = 34/516 (6%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSG-DFKSLEMVLYRMRREKRVVLEKSFIF--I 124
           E+F+  P+ G  +  + TF  L++ Y  +G   K LE++      E   VL    I+  I
Sbjct: 168 ELFDEMPEKGC-KPNEFTFGILVRGYCKAGLTDKGLELL---NAMESFGVLPNKVIYNTI 223

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             ++ +    +++ ++   M +E      V +FNS ++ + +EG    A   ++ +   +
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIV-TFNSRISALCKEGKVLDASRIFSDMELDE 282

Query: 185 HMNI-LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           ++ +  PN++T+NL++K  C++GL+++A  LF  +   +    + +Y   + GL +  + 
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  +L +M   G  P+  ++N+L++GLCK G L  A  +V  M   G  P+ VTY  L
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +HG C  G +D A SLL  M+ + C+PN  T   +++ L K+GR  +   +L  M E+ +
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQM-----------------------MEKGCKP 400
            ++    + ++ GL   G+ + A+++ K M                       +E  C P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + + YS L++GLC+ G+  EA+ +  EM+      ++  Y+  +  F + GK   A  + 
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           KDM K  C  +   Y+ LI GL    ++ E   +  +M  +G  P++  Y++ I  LC  
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
             VE+A  L +EM  ++    P+VF++  L+ A CK
Sbjct: 643 EKVEDATNLLDEM--MQKNIAPNVFSFKYLIEAFCK 676



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 260/538 (48%), Gaps = 37/538 (6%)

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           R+F +  +E H   ++ +  ++  ++++  ++    E +N I+++       ++L    V
Sbjct: 25  RIFSSPSEESH-GISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLS--V 81

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           +    +   +D A   F+ +  R  E  P +Y Y  L++   KE R++    L  +M + 
Sbjct: 82  VSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLC 141

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P   TFN+LI  LC +  +  A +L D M  KGC PNE T+  L+ G C  G  DK 
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           + LL+ M +   +PN+V Y TI++   + GR  D  +++  M E     +   +++ IS 
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261

Query: 377 LFKEGKAEDAMKLWKQMMEKGC----KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L KEGK  DA +++  M         +PN++ Y+ ++ G C+VG  ++A+ +   +  N 
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
             A+  +Y+  ++G    GK  +A  + K M       +   Y++L+ GLC+ G L +A+
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNI 549
            +   M   G  PD V Y  ++HG C+ G V+ A  L  EM+   CL     P+ +T NI
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL-----PNAYTCNI 436

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           LL++L K   IS + +LL  M ++G   D VTCNI +  L         G+  L++ AI 
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC--------GSGELDK-AIE 487

Query: 610 LFKRQRTSGGFK-----------IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           + K  R  G              + + +++    P   T+  ++  LC+  R   A N
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 229/509 (44%), Gaps = 61/509 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK----SFIFIFKAYGKAHLVEEAIRL 140
           TF S I      G       +   M  ++ + L +    ++  + K + K  L+E+A  L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA---------------LEFYNHIVNA-- 183
           F + + E     +++S+N  L  +++ G +  A               +  YN +++   
Sbjct: 314 FES-IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372

Query: 184 ---------------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
                          K   + P+ +T+  ++   C +G VD A  L +EM   NC P+ Y
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           T   L+  L K  R+ EA  LL +M   G     VT N++++GLC +GEL +A ++V  M
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492

Query: 289 FLKG-----------------------CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
            + G                       CLP+ +TY+TL++GLC  G   +A +L   M+ 
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
            K  P+ V Y   I+   K G+     RVL  ME++  H +   Y++LI GL  + +  +
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
              L  +M EKG  PN   Y+  I  LC   K ++A  +L EM+    A N F++  L++
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
            F +      A E++ + A + C   E  YS++ + L   G+L +A  +   +L RG + 
Sbjct: 673 AFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEML 534
               Y  ++  LC    +E A  + ++M+
Sbjct: 732 GTFLYKDLVESLCKKDELEVASGILHKMI 760


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  244 bits (624), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 145/440 (32%), Positives = 224/440 (50%), Gaps = 5/440 (1%)

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
           E  CK  + ++N+ +  + Q G    ALE    ++      + P+  T+ L++   C+  
Sbjct: 269 EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEK---GLGPDGHTYTLLVDGFCKQK 325

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
               A  +F  MP     P+ +TY  L+DG  KE  ++EA+ + DEM   G     VT+N
Sbjct: 326 RSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYN 385

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
            +I G+ K GE+ +A  L + M + G  P+  TYN LI G     ++ KA  LL  M A 
Sbjct: 386 AMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
           K  P+  TY  +I+GL           VL  M       N ++Y TLI    +E + E A
Sbjct: 446 KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           ++L K M+  G  P+   Y+ LI GLCR  K +EA+ +L +M   G   NA TY + +  
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           + +SG+   A   +KDM  +  V N V Y++LI G C+ G   EA   +  ML +G  PD
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           + AYS++IH L   G  +EA+ +F  +  L+    PDVF YN L++  CK+ +I  +  L
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQL 683

Query: 567 LNSMMDRGCDPDLVTCNIFL 586
            + M+  G +P++V  N  +
Sbjct: 684 YDEMLHNGINPNIVVYNTLI 703



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 232/471 (49%), Gaps = 9/471 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   + K   +EEA+R+   M+     K  V ++N+++  I + G   +A+  +N 
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITR-GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++ A    I P+T T+NL+I    +   +  A +L  EM  R   P  +TY  L+ GLC 
Sbjct: 407 MLMA---GIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCH 463

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            + L +A  +LD+M  +G  P    +  LI    +      A +L+  M   G LP+   
Sbjct: 464 SSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFC 523

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN LI GLC    +++A  LL  M      PN  TYG  IN   K G      R    M 
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 N  IY+ LI G    G   +A+  +K M+EKG  P+   YSA+I  L + GK  
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA  +  + +  G   + F Y+SL+ GF + G   KA +++ +M  N    N V Y+ LI
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703

Query: 480 --HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
             +G C+ G L EA  ++ +M+S+G  PD   Y  +I G    G++E+AL LF+E    +
Sbjct: 704 NDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEA---Q 760

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            KS   +  +N L+++ CK   +  + +L + M+D+   P++VT  I + A
Sbjct: 761 QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDA 811



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/530 (27%), Positives = 243/530 (45%), Gaps = 40/530 (7%)

Query: 72  STPK-LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE--KSFIFIFKAY 128
           STP+ L SY +       L     NSG     + +L ++ + ++  LE   S +  ++ +
Sbjct: 115 STPQYLHSYSI-------LAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREF 167

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL-------------- 174
           G ++L      +F   +D+F     +   +SV    I EG +   +              
Sbjct: 168 GGSNLT-----VFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANM 222

Query: 175 -----EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
                + Y  +V AK   I+P+  T+  VIK  C++G V     +  EM  + C+P+++T
Sbjct: 223 MGLFWKVYGSMVEAK---IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFT 278

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y   + GLC+   +DEA+ +   M   G  P   T+ +L++G CK      A  + ++M 
Sbjct: 279 YNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             G  PN  TY  LI G   +GN+++A+ + D M+      N VTY  +I G+ K G   
Sbjct: 339 SSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMA 398

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               +   M       + + Y+ LI G  K      A +L  +M  +   P+   YS LI
Sbjct: 399 KAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC      +A E+L +MI NG   N F Y +L+K + +  +   A+E+ K M  N  +
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +  CY+ LI GLC   K+ EA+M+   M  +G KP+   Y + I+    +G ++ A + 
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERY 578

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           F +ML       P+   Y IL+   C   N   ++     M+++G  PD+
Sbjct: 579 FKDML--SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDI 626



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 142/562 (25%), Positives = 242/562 (43%), Gaps = 52/562 (9%)

Query: 134 VEEAIRL---FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA--------------LEF 176
           +++++RL   FH    +    + + S++ +   +   GL H+A              LE 
Sbjct: 97  IDDSVRLQNFFHWSSSKMSTPQYLHSYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEI 156

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
            + +V         N   F++ I     LG ++ A  +F         P +     LM  
Sbjct: 157 LDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRD 216

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L K N +     +   M      P   T+  +I   CK G++ +  K+V +   K C PN
Sbjct: 217 LLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKG-KMVLSEMEKECKPN 275

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             TYN  I GLC  G +D+A+ +   M+     P+  TY  +++G  K  R+ +   +  
Sbjct: 276 LFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFE 335

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
           SM     + N + Y+ LI G  KEG  E+A+++  +M+ +G K N V Y+A+I G+ + G
Sbjct: 336 SMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAG 395

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           +  +A  +  EM+  G   + +TY+ L+ G+ +S    KA E+  +M       +   YS
Sbjct: 396 EMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYS 455

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           VLI GLC    L++A  V  QM+  G KP+V  Y ++I         E A++L   M+  
Sbjct: 456 VLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIA- 514

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                PD+F YN L+  LC+   +  +  LL  M ++G  P+  T   F+    +  E  
Sbjct: 515 -NGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI- 572

Query: 597 QDGTDFLNELAIRLFKRQRTSG-----------------------GFKIVEVMLQKFLSP 633
                   ++A R FK   +SG                            + ML+K L P
Sbjct: 573 --------QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIP 624

Query: 634 QTSTWERVVQELCRPKRIQAAI 655
               +  ++  L +  + + A+
Sbjct: 625 DIRAYSAIIHSLSKNGKTKEAM 646



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 214/454 (47%), Gaps = 17/454 (3%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +A  VEEA  L   M  E   K    ++ + +N+  + G    A  ++  ++++    I+
Sbjct: 533 RAKKVEEAKMLLVDM-GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS---GIV 588

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN + + ++IK  C +G    A+  F+ M  +   PDI  Y  ++  L K  +  EA+ +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI--HGL 307
             +    G  P    +N LI+G CK G++ +A++L D M   G  PN V YNTLI  +G 
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGY 708

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  GNL +A  L D M++    P+   Y  +I+G  K G  ++ A  L    ++K   + 
Sbjct: 709 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN-LEKALSLFHEAQQKSVGSL 767

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             +++LI    K GK  +A +L+  M++K   PN V Y+ LID   +    +EAE++  +
Sbjct: 768 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 827

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M       N  TY+SL+  + + G   K + ++KDM       + + Y V+    C++GK
Sbjct: 828 METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 887

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQPD 543
             EA  +  + L  G K +   + ++I  LC    +   L+L +EM    L L  K    
Sbjct: 888 SLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSK---- 943

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
             T N LL    K  N   +  +L  M   G  P
Sbjct: 944 --TCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/539 (25%), Positives = 232/539 (43%), Gaps = 44/539 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y  S D      +L  M+  K      ++  +      +  +++A  +   M
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +     K  V  + +++   +QE  Y  A+E    ++      +LP+   +N +I  +CR
Sbjct: 478 IRN-GVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN---GVLPDLFCYNCLIIGLCR 533

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V+ A  L  +M  +  +P+ +TY   ++   K   +  A     +M   G  P  V 
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593

Query: 265 FNVLINGLC-----------------------------------KNGELGRAAKLVDNMF 289
           + +LI G C                                   KNG+   A  +     
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN--GLVKLGR 347
             G +P+   YN+LI G C +G+++KA  L D M+ +   PN V Y T+IN  G  K G 
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGN 713

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +  ++   M  +    + YIY  LI G  KEG  E A+ L+ +  +K    +   +++
Sbjct: 714 LTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNS 772

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LID  C+ GK  EA E+  +M++     N  TY+ L+  + ++    +A +++ DM   N
Sbjct: 773 LIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRN 832

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            + N + Y+ L+    + G   +   ++  M +RG   D +AY  M    C  G   EAL
Sbjct: 833 IIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEAL 892

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           KL N+ L    K + DVF  + L+  LCK+  IS  ++LL+ M          TCN  L
Sbjct: 893 KLLNKSLVEGIKLEDDVF--DALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLL 949



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/432 (23%), Positives = 186/432 (43%), Gaps = 7/432 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ + I  Y+ SG+ +  E     M     V     +  + K +       EA+  F  M
Sbjct: 558 TYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCM 617

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +++      +++++++++ + + G    A+  +   +      ++P+   +N +I   C+
Sbjct: 618 LEK-GLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT---GVVPDVFLYNSLISGFCK 673

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMD--GLCKENRLDEAVLLLDEMQVDGCFPTP 262
            G ++ A QL+ EM      P+I  Y TL++  G CK   L EA  L DEM   G  P  
Sbjct: 674 EGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDG 733

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             + +LI+G  K G L +A  L      K  + +   +N+LI   C  G + +A  L D 
Sbjct: 734 YIYCILIDGCGKEGNLEKALSLFHEAQQKS-VGSLSAFNSLIDSFCKHGKVIEARELFDD 792

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MV  K  PN VTY  +I+   K     +  ++ + ME R    N   Y++L+    + G 
Sbjct: 793 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 852

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
               + L+K M  +G   + + Y  +    C+ GK  EA ++L + +  G       + +
Sbjct: 853 RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 912

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+    +  +    +E+  +M K     +    + L+ G  + G   EA  V   M   G
Sbjct: 913 LIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLG 972

Query: 503 CKPDVVAYSSMI 514
             P  ++ +  I
Sbjct: 973 WVPTSLSLTDSI 984



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 147/346 (42%), Gaps = 21/346 (6%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + SLI  +   GD +    +   M        +V+  + I  +  Y K+  + EA +LF 
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDY-GYCKSGNLTEAFKLFD 722

Query: 143 TMVDEFHCKRTVKSFNSVLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
            M+      + +     +  ++I    +EG   +AL  + H    K +  L     FN +
Sbjct: 723 EMI-----SKGISPDGYIYCILIDGCGKEGNLEKALSLF-HEAQQKSVGSLS---AFNSL 773

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           I + C+ G V  A +LF +M  +   P+I TY  L+D   K   ++EA  L  +M+    
Sbjct: 774 IDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNI 833

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  +T+  L+    + G   +   L  +M  +G   + + Y  +    C +G   +A+ 
Sbjct: 834 IPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALK 893

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           LL++ +       +  +  +I  L K  +      +L  M + +  ++    +TL+ G +
Sbjct: 894 LLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFY 953

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           K G  ++A K+   M   G  P ++   +L D +   G+ D   +I
Sbjct: 954 KSGNEDEASKVLGVMQRLGWVPTSL---SLTDSI-STGRDDMKSDI 995


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 244/480 (50%), Gaps = 16/480 (3%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP+   FN ++  + ++   D  I L  +M       ++YTY  L++  C+ +++  A+ 
Sbjct: 7   LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LL +M   G  P+ VT + L+NG C    +  A  LVD M   G  P+ +T+ TLIHGL 
Sbjct: 67  LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           L     +AV+L+DRMV   C PN VTYG ++NGL K G       +L  ME  K   +  
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           I++T+I  L K    +DA+ L+K+M  KG +PN V YS+LI  LC  G+  +A ++L +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I      N  T+++L+  F + GK  +A ++  DM K +   +   Y+ LI+G C   +L
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A+ ++  M+S+ C PD+  Y+++I G C +  VE+  +LF EM         D  TY 
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYT 364

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNEL 606
            L+  L    +  ++  +   M+  G  PD++T +I L  L    KLE   +  D++ + 
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424

Query: 607 AIRL------------FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            I+L             K  +   G+ +   +  K + P   T+  ++  LC  + +Q A
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/504 (29%), Positives = 248/504 (49%), Gaps = 71/504 (14%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++  FN +L+ I +   +   +     +   + + I  N  T+N++I   CR   +  A+
Sbjct: 9   SIFEFNKLLSAIAKMKKFDLVISLGEKM---QRLGISHNLYTYNILINCFCRRSQISLAL 65

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L  +M     EP I T  +L++G C   R+ +AV L+D+M   G  P  +TF  LI+GL
Sbjct: 66  ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC---- 328
             + +   A  LVD M  +GC PN VTY  +++GLC +G++D A +LL++M A+K     
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185

Query: 329 -------------------------------MPNEVTYGTIINGLVKLGRAVDGARVLMS 357
                                           PN VTY ++I+ L   GR  D +++L  
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M E+K + N   ++ LI    KEGK  +A KL   M+++   P+   Y++LI+G C   +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            D+A+++   M++  C  +  TY++L+KGF +S +     E++++M+    V + V Y+ 
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM---- 533
           LI GL  DG    A+ V+ QM+S G  PD++ YS ++ GLCN G +E+AL++F+ M    
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425

Query: 534 --------------LCLEPKS---------------QPDVFTYNILLNALCKQSNISHSI 564
                         +C   K                +P+V TYN +++ LC +  +  + 
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTA 588
            LL  M + G  PD  T N  + A
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRA 509



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/398 (32%), Positives = 207/398 (52%), Gaps = 4/398 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ L   MV +  C+  + ++  V+N + + G    A    N +  AK   I  + + F
Sbjct: 133 EAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK---IEADVVIF 188

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N +I ++C+   VD+A+ LF+EM  +   P++ TY +L+  LC   R  +A  LL +M  
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
               P  VTFN LI+   K G+   A KL D+M  +   P+  TYN+LI+G C+   LDK
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  + + MV+  C P+  TY T+I G  K  R  DG  +   M  R    +   Y+TLI 
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GLF +G  ++A K++KQM+  G  P+ + YS L+DGLC  GK ++A E+   M  +    
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           + + Y+++++G  ++GK     +++  ++      N V Y+ +I GLC    L+EA  + 
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +M   G  PD   Y+++I      G    + +L  EM
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 232/452 (51%), Gaps = 8/452 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y     + +A+ L   MV+  +   T+ +F ++++ +    L+++A E    +   
Sbjct: 86  LLNGYCHGKRISDAVALVDQMVEMGYRPDTI-TFTTLIHGLF---LHNKASEAVALVDRM 141

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 PN +T+ +V+  +C+ G +D A  L  +M     E D+  + T++D LCK   +
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A+ L  EM+  G  P  VT++ LI+ LC  G    A++L+ +M  K   PN VT+N L
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I     +G   +A  L D M+     P+  TY ++ING     R     ++   M  +  
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TLI G  K  + ED  +L+++M  +G   +TV Y+ LI GL   G  D A++
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  +M+++G   +  TYS L+ G   +GK  KA+E++  M K+    +   Y+ +I G+C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK+ +   ++  +  +G KP+VV Y++MI GLC+   ++EA  L  +M   E    PD
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK--EDGPLPD 499

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
             TYN L+ A  +  + + S +L+  M  R C
Sbjct: 500 SGTYNTLIRAHLRDGDKAASAELIREM--RSC 529



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 147/302 (48%), Gaps = 9/302 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF +LI  +   G F   E +   M   KR +    F +  +   +     +++A ++F 
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMI--KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV +  C   + ++N+++    +        E +  +    H  ++ +T+T+  +I+ +
Sbjct: 315 FMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREM---SHRGLVGDTVTYTTLIQGL 370

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
              G  DNA ++F++M      PDI TY  L+DGLC   +L++A+ + D MQ        
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             +  +I G+CK G++     L  ++ LKG  PN VTYNT+I GLC K  L +A +LL +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M     +P+  TY T+I   ++ G     A ++  M   +F V +     L++ +  +G+
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVANMLHDGR 549

Query: 383 AE 384
            +
Sbjct: 550 LD 551



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 16/241 (6%)

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M+ +    + F ++ L+    +  K    + + + M +    +N   Y++LI+  C   +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A  +  +M+  G +P +V  SS+++G C+   + +A+ L ++M  +E   +PD  T+
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM--VEMGYRPDTITF 118

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE------------KLEA 595
             L++ L   +  S ++ L++ M+ RGC P+LVT  + +  L +            K+EA
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178

Query: 596 PQDGTD--FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
            +   D    N +   L K +       + + M  K + P   T+  ++  LC   R   
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238

Query: 654 A 654
           A
Sbjct: 239 A 239



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 19/149 (12%)

Query: 527 LKLFNEMLCLEPKSQP-----DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +K F+ ++ L  K Q      +++TYNIL+N  C++S IS ++ LL  MM  G +P +VT
Sbjct: 23  MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 82

Query: 582 CNIFLTAL--KEKLEAPQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVML 627
            +  L      +++       D + E+  R            LF   + S    +V+ M+
Sbjct: 83  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 142

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           Q+   P   T+  VV  LC+   I  A N
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 259/514 (50%), Gaps = 44/514 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA+  F+ M+ +     TV  FN +L  I +   +   L     +       I P+  
Sbjct: 51  LDEALSTFNRMLHKQPPPSTV-DFNRLLTSIAKTKHHSTLLSLSRQM---DSFGIPPDVY 106

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T  +VI ++C L  VD A     ++     +PD  T+ TL+ GLC E ++ EA+ L D+M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  LINGLCK G    A +L+ +M    C PN V ++TLI  LC    +
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A ++   M+     PN VTY ++I+GL KL        ++  M + K   + +  +T+
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEG   +A  +   M+ +G +PN V Y+AL+DG C   + D A ++   M++  C
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
            AN  +Y++L+ G+ +     KA+ ++++M++     N V Y+ LIHGLC  G+L++A  
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 494 VWTQMLSRG---------------CK--------------------PDVVAYSSMIHGLC 518
           ++ +M++RG               CK                    PD+  Y++++ G+C
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466

Query: 519 NAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
            AG +E+A  LF+    L  K  QP+V+TYNI+++ LCKQ  ++ +  L + M   GC P
Sbjct: 467 RAGELEDARDLFSN---LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           +  T N+         EA +   + L E+  R F
Sbjct: 524 NDCTYNLITRGFLRNNEALRT-IELLEEMLARGF 556



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 232/446 (52%), Gaps = 11/446 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F +++  +  EG    AL  ++ ++        PN +T+  +I  +C++G    AI+L 
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGE---GFQPNVVTYGTLINGLCKVGNTSAAIRLL 198

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R M   NC+P++  + TL+D LCK+ ++ EA  +  EM   G  P  VT+N LI+GLCK 
Sbjct: 199 RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            E      L++ M     +P+  T NT++  LC +G + +A  ++D M+     PN VTY
Sbjct: 259 CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY 318

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +++G           +V  +M  +    N   Y+TLI+G  K    + AM L+++M  
Sbjct: 319 NALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSR 378

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +   PNTV Y+ LI GLC VG+  +A  +  EM+  G   +  TY +L     ++    K
Sbjct: 379 QELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDK 438

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ + K +  +N   +   Y+ ++ G+C  G+L +AR +++ + S+G +P+V  Y+ MIH
Sbjct: 439 AMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIH 498

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  G + EA KLF+EM   +    P+  TYN++     + +    +I+LL  M+ RG 
Sbjct: 499 GLCKQGLLAEASKLFSEM--NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGF 556

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTD 601
             D+ T  + +  L +      DG D
Sbjct: 557 SVDVSTTTLLVGMLSD------DGLD 576



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 213/412 (51%), Gaps = 12/412 (2%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVE 135
           +Q    T+ +LI      G+  +   +L  M +   +  VV+   F  +  +  K   V 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVV---FSTLIDSLCKDRQVT 227

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA  +F  M+ +      + ++NS+++ + +   +       N +V++K   I+P+  T 
Sbjct: 228 EAFNIFSEMITK-GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK---IMPDVFTL 283

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N V+  +C+ G+V  A  +   M  R  EP++ TY  LMDG C  N +D AV + D M  
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
             C    +++N LING CK   + +A  L + M  +   PN VTYNTLIHGLC  G L  
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEYIYSTLI 374
           A+SL   MVA   +P+ VTY T+ + L K  R +D A  L+ ++E   +  +  IY+T++
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTLSDYLCK-NRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G+ + G+ EDA  L+  +  KG +PN   Y+ +I GLC+ G   EA ++  EM  NGC+
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 522

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            N  TY+ + +GF  + +  + +E+ ++M       +    ++L+  L +DG
Sbjct: 523 PNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 234/461 (50%), Gaps = 9/461 (1%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
           KLG +Q   +TF +LI+     G       +  +M  E       ++  +     K    
Sbjct: 133 KLG-HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 191

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
             AIRL  +M ++ +C+  V  F+++++ + ++     A   ++ ++      I PN +T
Sbjct: 192 SAAIRLLRSM-EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITK---GISPNIVT 247

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I  +C+L    +   L  EM      PD++T  T++D LCKE  + EA  ++D M 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  VT+N L++G C   E+  A K+ D M  K C+ N ++YNTLI+G C   ++D
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA+ L + M   +  PN VTY T+I+GL  +GR  D   +   M  R    +   Y TL 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L K    + AM L K +      P+  +Y+ ++DG+CR G+ ++A ++   + + G  
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N +TY+ ++ G  + G   +A +++ +M KN C  N+  Y+++  G   + +      +
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
             +ML+RG   D V+ ++++ G+ +   +++++K   ++LC
Sbjct: 548 LEEMLARGFSVD-VSTTTLLVGMLSDDGLDQSVK---QILC 584



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 182/358 (50%), Gaps = 16/358 (4%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD+A+S  +RM+  +  P+ V +  ++  + K         +   M+      + Y  + 
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +I+ L    + + A     ++++ G +P+   ++ LI GLC  GK  EA  +  +MI  G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  TY +L+ G  + G    A+ + + M + NC  N V +S LI  LC+D ++ EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++++M+++G  P++V Y+S+IHGLC     +    L NEM+  + K  PDVFT N +++
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV--DSKIMPDVFTLNTVVD 288

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFL------- 603
           ALCK+  ++ + D+++ M+ RG +P++VT N  +    L+ +++      D +       
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 604 -----NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                N L     K Q       + E M ++ L+P T T+  ++  LC   R+Q AI+
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 197/437 (45%), Gaps = 19/437 (4%)

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           N LDEA+   + M      P+ V FN L+  + K         L   M   G  P+  T 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
             +I+ LC    +D A S L +++     P+  T+ T+I GL   G+  +   +   M  
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
             F  N   Y TLI+GL K G    A++L + M +  C+PN VV+S LID LC+  +  E
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  I  EMI  G + N  TY+SL+ G  +  +      +  +M  +  + +    + ++ 
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC++G + EA  V   M+ RG +P+VV Y++++ G C    V+ A+K+F+ M  +    
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM--VHKDC 346

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
             +V +YN L+N  CK  ++  ++ L   M  +   P+ VT N  +  L   +   QD  
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH-VGRLQDAI 405

Query: 601 DFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
              +E+  R               L K +       +++ +      P    +  ++  +
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 646 CRPKRIQAAINKCWSNL 662
           CR   ++ A    +SNL
Sbjct: 466 CRAGELEDA-RDLFSNL 481



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 162/345 (46%), Gaps = 4/345 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI       ++K +  ++  M   K +    +   +  A  K  +V EA  +   M
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 306

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +     +  V ++N++++          A++ ++ +V   H + + N +++N +I   C+
Sbjct: 307 IHR-GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV---HKDCVANVISYNTLINGYCK 362

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +  VD A+ LF EM  +   P+  TY TL+ GLC   RL +A+ L  EM   G  P  VT
Sbjct: 363 IQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVT 422

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L + LCKN  L +A  L+  +      P+   Y T++ G+C  G L+ A  L   + 
Sbjct: 423 YRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLS 482

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    PN  TY  +I+GL K G   + +++   M +     N+  Y+ +  G  +  +A 
Sbjct: 483 SKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEAL 542

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
             ++L ++M+ +G   +    + L+  L   G     ++IL +++
Sbjct: 543 RTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCKIV 587


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 160/494 (32%), Positives = 243/494 (49%), Gaps = 37/494 (7%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMR----REKRVVLEKSFIFIFKAYGKAHL-----VEE 136
           F SLI  Y  SGD+     +L +M     +   VV     I I    G   L     +E 
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN---ILIGGICGNEKLPSLDVLEL 428

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A + +  M+D  H      + +++   +   G + +A   Y+ I        +P+T T++
Sbjct: 429 AEKAYGEMLDA-HVVLNKVNVSNLARCLCGAGKFEKA---YSIIREMMSKGFIPDTSTYS 484

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            VI  +C    VDNA  LF EM   +  PD++TY  L+D  CK   L +A    DEM  D
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           GC P  VT+  LI+   K  ++  A +L + M  +GC+PN VTY  LI G C  G ++KA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             +  RM  +  +P+   Y  I +G ++                     N + Y  L+ G
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIR-------------------DPNIFTYGALVDG 645

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K  K ++A  L   M  +GC+PN +VY ALIDG C+VGK DEA+ +  +M   G   N
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            +TYSSL+   F+  +   A+++   M +N+C  N + Y+ +I GLC+ GK  EA  + +
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M  +GC P+VV Y++MI G   AG V++ L+L  +M        P+  TY +L+N  C 
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGA--KGCAPNFVTYRVLINHCCA 823

Query: 557 QSNISHSIDLLNSM 570
              +  +  LL+ M
Sbjct: 824 AGLLDDAHQLLDEM 837



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 153/572 (26%), Positives = 257/572 (44%), Gaps = 81/572 (14%)

Query: 157 FNSVLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
              +LNV+I++    GL++ ALE    +   K +   P+ LT+N +++       +D A 
Sbjct: 196 LGKLLNVLIRKCCRNGLWNVALEELGRL---KDLGYKPSRLTYNALVRVFLEADRLDTAY 252

Query: 213 QLFREMPVRNCEPDIYT--------------------------------YCTLMDGLCKE 240
            + REM       D YT                                Y  ++ GLC+ 
Sbjct: 253 LVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEA 312

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +  +EA+  L  M+   C P  VT+ +L+ G  +  +LGR  +++  M  +GC P+   +
Sbjct: 313 SLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIF 372

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+LIH  C  G+   A  LL +M    C P  V Y  +I G+   G     +  ++ + E
Sbjct: 373 NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLELAE 430

Query: 361 RKF------HV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           + +      HV  N+   S L   L   GK E A  + ++MM KG  P+T  YS +I  L
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   K D A  +  EM +N    + FTY+ L+  F + G   +A + + +M ++ C  N 
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LIH   +  K+  A  ++  MLS GC P+VV Y+++I G C +G +E+A +++  
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 533 M------------LCLEPKS--QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           M              ++  +   P++FTY  L++ LCK   +  + DLL+ M   GC+P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 579 LVT----------------CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
            +                   +  T + E+   P   T   + L  RLFK +R     K+
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT--YSSLIDRLFKDKRLDLALKV 728

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  ML+   +P    +  ++  LC+  +   A
Sbjct: 729 LSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 227/493 (46%), Gaps = 40/493 (8%)

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           Y  +++A   +++ N +  + + + +C  G  + A  + REM  +   PD  TY  ++  
Sbjct: 433 YGEMLDA---HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC  +++D A LL +EM+ +   P   T+ +LI+  CK G L +A K  D M   GC PN
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VTY  LIH       +  A  L + M++  C+PN VTY  +I+G  K G+     ++  
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M       +  +Y  +  G  ++                   PN   Y AL+DGLC+  
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRD-------------------PNIFTYGALVDGLCKAH 650

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K  EA ++L  M   GC  N   Y +L+ GF + GK  +A  ++  M++     N   YS
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            LI  L +D +L  A  V ++ML   C P+V+ Y+ MI GLC  G  +EA +L + M   
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME-- 768

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
           E    P+V TY  +++   K   +   ++L+  M  +GC P+ VT  + +          
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA-GLL 827

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL--------------SPQTSTWERVV 642
            D    L+E+  + +  +  +G  K++E   ++F+               P    +  ++
Sbjct: 828 DDAHQLLDEMK-QTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILI 886

Query: 643 QELCRPKRIQAAI 655
              C+  R++ A+
Sbjct: 887 DSFCKAGRLELAL 899



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 144/541 (26%), Positives = 263/541 (48%), Gaps = 41/541 (7%)

Query: 84   STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
            ST+  +I    N+    +  ++   M+    V    ++  +  ++ K  L+++A + F  
Sbjct: 481  STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 144  MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
            MV +  C   V ++ ++++  ++      A E +  +++      +PN +T+  +I   C
Sbjct: 541  MVRD-GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE---GCIPNVVTYTALIDGHC 596

Query: 204  RLGLVDNAIQLFREMP------------------VRNCEPDIYTYCTLMDGLCKENRLDE 245
            + G ++ A Q++  M                   +R+  P+I+TY  L+DGLCK +++ E
Sbjct: 597  KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRD--PNIFTYGALVDGLCKAHKVKE 654

Query: 246  AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
            A  LLD M V+GC P  + ++ LI+G CK G+L  A  +   M  +G  PN  TY++LI 
Sbjct: 655  ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 306  GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
             L     LD A+ +L RM+ + C PN + Y  +I+GL K+G+  +  R++  MEE+  H 
Sbjct: 715  RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 366  NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
            N   Y+ +I G  K GK +  ++L +QM  KGC PN V Y  LI+  C  G  D+A ++L
Sbjct: 775  NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 426  FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             EM       +   Y  +++GF  + +   ++ +  ++A+N  V     Y +LI   C+ 
Sbjct: 835  DEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKA 892

Query: 486  GKLREARMVWTQMLS--RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
            G+L  A  +  +M S       D   YSS+I  L  A  V++A +L+ +M  ++    P+
Sbjct: 893  GRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADM--IKRGGIPE 950

Query: 544  VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
            +  +  L+  L + +    ++ L + +           C + +  ++E         +FL
Sbjct: 951  LSIFFYLVKGLIRINRWEEALQLSDCI-----------CQMMVDFVREGFLGSSHDYEFL 999

Query: 604  N 604
            N
Sbjct: 1000 N 1000



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 211/485 (43%), Gaps = 98/485 (20%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +T+ +  +I  +C   L + A+     M   +C P++ TY  L+ G  ++ +L     +L
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG---- 306
             M  +GC+P+   FN LI+  C++G+   A KL+  M   GC P  V YN LI G    
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 307 -------------------------------------LCLKGNLDKAVSLLDRMVASKCM 329
                                                LC  G  +KA S++  M++   +
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV--NEYIYSTLISGLFKEGKAEDAM 387
           P+  TY  +I GL+     VD A +L   E +  HV  + + Y+ LI    K G  + A 
Sbjct: 478 PDTSTYSKVI-GLLCNASKVDNAFLLFE-EMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           K + +M+  GC PN V Y+ALI    +  K   A E+   M++ GC  N  TY++L+ G 
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 448 FESGKGHKAVEIWKDMAKN----------------------------------------- 466
            +SG+  KA +I+  M  N                                         
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 467 ----------NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
                      C  N + Y  LI G C+ GKL EA+MV+T+M  RG  P+V  YSS+I  
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           L     ++ ALK+ + ML  E    P+V  Y  +++ LCK      +  L++ M ++GC 
Sbjct: 716 LFKDKRLDLALKVLSRML--ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773

Query: 577 PDLVT 581
           P++VT
Sbjct: 774 PNVVT 778


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 160/494 (32%), Positives = 243/494 (49%), Gaps = 37/494 (7%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMR----REKRVVLEKSFIFIFKAYGKAHL-----VEE 136
           F SLI  Y  SGD+     +L +M     +   VV     I I    G   L     +E 
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN---ILIGGICGNEKLPSLDVLEL 428

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A + +  M+D  H      + +++   +   G + +A   Y+ I        +P+T T++
Sbjct: 429 AEKAYGEMLDA-HVVLNKVNVSNLARCLCGAGKFEKA---YSIIREMMSKGFIPDTSTYS 484

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            VI  +C    VDNA  LF EM   +  PD++TY  L+D  CK   L +A    DEM  D
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           GC P  VT+  LI+   K  ++  A +L + M  +GC+PN VTY  LI G C  G ++KA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             +  RM  +  +P+   Y  I +G ++                     N + Y  L+ G
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIR-------------------DPNIFTYGALVDG 645

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K  K ++A  L   M  +GC+PN +VY ALIDG C+VGK DEA+ +  +M   G   N
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            +TYSSL+   F+  +   A+++   M +N+C  N + Y+ +I GLC+ GK  EA  + +
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M  +GC P+VV Y++MI G   AG V++ L+L  +M        P+  TY +L+N  C 
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG--AKGCAPNFVTYRVLINHCCA 823

Query: 557 QSNISHSIDLLNSM 570
              +  +  LL+ M
Sbjct: 824 AGLLDDAHQLLDEM 837



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 153/572 (26%), Positives = 257/572 (44%), Gaps = 81/572 (14%)

Query: 157 FNSVLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
              +LNV+I++    GL++ ALE    +   K +   P+ LT+N +++       +D A 
Sbjct: 196 LGKLLNVLIRKCCRNGLWNVALEELGRL---KDLGYKPSRLTYNALVRVFLEADRLDTAY 252

Query: 213 QLFREMPVRNCEPDIYT--------------------------------YCTLMDGLCKE 240
            + REM       D YT                                Y  ++ GLC+ 
Sbjct: 253 LVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEA 312

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +  +EA+  L  M+   C P  VT+ +L+ G  +  +LGR  +++  M  +GC P+   +
Sbjct: 313 SLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIF 372

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+LIH  C  G+   A  LL +M    C P  V Y  +I G+   G     +  ++ + E
Sbjct: 373 NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLELAE 430

Query: 361 RKF------HV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           + +      HV  N+   S L   L   GK E A  + ++MM KG  P+T  YS +I  L
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   K D A  +  EM +N    + FTY+ L+  F + G   +A + + +M ++ C  N 
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LIH   +  K+  A  ++  MLS GC P+VV Y+++I G C +G +E+A +++  
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 533 M------------LCLEPKS--QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           M              ++  +   P++FTY  L++ LCK   +  + DLL+ M   GC+P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 579 LVT----------------CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
            +                   +  T + E+   P   T   + L  RLFK +R     K+
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT--YSSLIDRLFKDKRLDLALKV 728

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  ML+   +P    +  ++  LC+  +   A
Sbjct: 729 LSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 227/493 (46%), Gaps = 40/493 (8%)

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           Y  +++A   +++ N +  + + + +C  G  + A  + REM  +   PD  TY  ++  
Sbjct: 433 YGEMLDA---HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC  +++D A LL +EM+ +   P   T+ +LI+  CK G L +A K  D M   GC PN
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VTY  LIH       +  A  L + M++  C+PN VTY  +I+G  K G+     ++  
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M       +  +Y  +  G  ++                   PN   Y AL+DGLC+  
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRD-------------------PNIFTYGALVDGLCKAH 650

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K  EA ++L  M   GC  N   Y +L+ GF + GK  +A  ++  M++     N   YS
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            LI  L +D +L  A  V ++ML   C P+V+ Y+ MI GLC  G  +EA +L + M   
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME-- 768

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
           E    P+V TY  +++   K   +   ++L+  M  +GC P+ VT  + +          
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA-GLL 827

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL--------------SPQTSTWERVV 642
            D    L+E+  + +  +  +G  K++E   ++F+               P    +  ++
Sbjct: 828 DDAHQLLDEMK-QTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILI 886

Query: 643 QELCRPKRIQAAI 655
              C+  R++ A+
Sbjct: 887 DSFCKAGRLELAL 899



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 137/484 (28%), Positives = 241/484 (49%), Gaps = 28/484 (5%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           ST+  +I    N+    +  ++   M+    V    ++  +  ++ K  L+++A + F  
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV +  C   V ++ ++++  ++      A E +  +++      +PN +T+  +I   C
Sbjct: 541 MVRD-GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE---GCIPNVVTYTALIDGHC 596

Query: 204 RLGLVDNAIQLFREMP------------------VRNCEPDIYTYCTLMDGLCKENRLDE 245
           + G ++ A Q++  M                   +R  +P+I+TY  L+DGLCK +++ E
Sbjct: 597 KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR--DPNIFTYGALVDGLCKAHKVKE 654

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  LLD M V+GC P  + ++ LI+G CK G+L  A  +   M  +G  PN  TY++LI 
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
            L     LD A+ +L RM+ + C PN + Y  +I+GL K+G+  +  R++  MEE+  H 
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y+ +I G  K GK +  ++L +QM  KGC PN V Y  LI+  C  G  D+A ++L
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM       +   Y  +++GF  + +   ++ +  ++A+N  V     Y +LI   C+ 
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKA 892

Query: 486 GKLREARMVWTQMLS--RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           G+L  A  +   M S       D   YSS+I  L  A  V++A +L+ +M+      +  
Sbjct: 893 GRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELS 952

Query: 544 VFTY 547
           +F Y
Sbjct: 953 IFFY 956



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 211/485 (43%), Gaps = 98/485 (20%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +T+ +  +I  +C   L + A+     M   +C P++ TY  L+ G  ++ +L     +L
Sbjct: 298 DTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRIL 357

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG---- 306
             M  +GC+P+   FN LI+  C++G+   A KL+  M   GC P  V YN LI G    
Sbjct: 358 SMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGN 417

Query: 307 -------------------------------------LCLKGNLDKAVSLLDRMVASKCM 329
                                                LC  G  +KA S++  M++   +
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV--NEYIYSTLISGLFKEGKAEDAM 387
           P+  TY  +I GL+     VD A +L   E +  HV  + + Y+ LI    K G  + A 
Sbjct: 478 PDTSTYSKVI-GLLCNASKVDNAFLLFE-EMKSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           K + +M+  GC PN V Y+ALI    +  K   A E+   M++ GC  N  TY++L+ G 
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 448 FESGKGHKAVEIWKDMAKN----------------------------------------- 466
            +SG+  KA +I+  M  N                                         
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 467 ----------NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
                      C  N + Y  LI G C+ GKL EA+MV+T+M  RG  P+V  YSS+I  
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           L     ++ ALK+ + ML  E    P+V  Y  +++ LCK      +  L++ M ++GC 
Sbjct: 716 LFKDKRLDLALKVLSRML--ENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCH 773

Query: 577 PDLVT 581
           P++VT
Sbjct: 774 PNVVT 778



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 173/401 (43%), Gaps = 62/401 (15%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +  SG  +    +  RMR    +      + ++      ++ +  I  +  +
Sbjct: 587 TYTALIDGHCKSGQIEKACQIYARMRGNADI----PDVDMYFKIDDGNIRDPNIFTYGAL 642

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           VD       VK    +L+V+  EG                     PN + ++ +I   C+
Sbjct: 643 VDGLCKAHKVKEARDLLDVMSVEGCE-------------------PNHIVYDALIDGFCK 683

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G +D A  +F +M  R   P++YTY +L+D L K+ RLD A+ +L  M  + C P  + 
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVII 743

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +I+GLCK G+   A +L+  M  KGC PN VTY  +I G    G +DK + L+ +M 
Sbjct: 744 YTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG 803

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF--HVNEY-------------- 368
           A  C PN VTY  +IN     G   D  ++L  M++  +  H+  Y              
Sbjct: 804 AKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIIS 863

Query: 369 -----------------IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV----VYSA 407
                             Y  LI    K G+ E A++L K M    C   +     +YS+
Sbjct: 864 LGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXM--SSCTSYSAADKDLYSS 921

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           LI+ L    K D+A E+  +MI  G       +  L+KG  
Sbjct: 922 LIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLI 962



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 106/224 (47%), Gaps = 12/224 (5%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K    +EA RL  +M++E  C   V ++ ++++   + G   + LE    +  AK     
Sbjct: 753 KVGKTDEAYRLM-SMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQM-GAK--GCA 808

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T+ ++I   C  GL+D+A QL  EM        +  Y  +++G  +E  +  ++ L
Sbjct: 809 PNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFII--SLGL 866

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL----PNEVTYNTLIH 305
           LDE+  +   P    + +LI+  CK G L  A +L   M    C      ++  Y++LI 
Sbjct: 867 LDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXM--SSCTSYSAADKDLYSSLIE 924

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            L L   +DKA  L   M+    +P    +  ++ GL+++ R +
Sbjct: 925 SLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRTL 968


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/500 (29%), Positives = 247/500 (49%), Gaps = 40/500 (8%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           + +  P+ G   +    ++ +++     G F+S   VL  +      +   +   +  A 
Sbjct: 181 VLDEMPRRGCAPI-PPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAI 239

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
                V+EA+ L   +   F C+  V S+N+VL  +     +    E    +V    M  
Sbjct: 240 CDQGSVDEALHLLRDL-PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV---RMAC 295

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN +TFN +I  +CR GL +   ++  +M    C PDI  Y T++DG+CKE  L+ A  
Sbjct: 296 PPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHE 355

Query: 249 LLDEMQVDG------CFPT-----------------------------PVTFNVLINGLC 273
           +L+ M   G      C+ T                              VTFN+L++  C
Sbjct: 356 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 415

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           +NG + R  +L++ M   GC+P+ +TY T+I+G C +G +D+AV LL  M A  C PN +
Sbjct: 416 QNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 475

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           +Y  ++ GL    R VD   ++  M ++   +N   ++TLI+ L K+G  E A++L KQM
Sbjct: 476 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 535

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +  GC P+ + YS +IDGL + GK DEA E+L  M+N G + N   YSS+       G+ 
Sbjct: 536 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 595

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           +K ++++ ++       + V Y+ +I  LC+ G+   A      M+S GC P+   Y+ +
Sbjct: 596 NKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTIL 655

Query: 514 IHGLCNAGSVEEALKLFNEM 533
           I GL + G V+EA ++  E+
Sbjct: 656 IRGLASEGFVKEAQEMLTEL 675



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 250/487 (51%), Gaps = 23/487 (4%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +  +    A  + + PN  T+  V++ +C  G + +A+ +  EMP R C P    
Sbjct: 137 YCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPM 196

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  +++  C+      AV +L+++   GC       N+++N +C  G +  A  L+ ++ 
Sbjct: 197 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLP 256

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC P+ V+YN ++ GLC+         L++ MV   C PN VT+ T+I+ L + G   
Sbjct: 257 SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFE 316

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               VL  M E     +  +Y+T+I G+ KEG  E A ++  +M   G KPN V Y+ L+
Sbjct: 317 RVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLL 376

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   + +E EE+L EM +  C  +  T++ L+  F ++G   + +E+ + M ++ C+
Sbjct: 377 KGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCM 436

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + + Y+ +I+G C++G + EA M+   M + GCKP+ ++Y+ ++ GLC+A    +A  L
Sbjct: 437 PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDL 496

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++M  ++     +  T+N L+N LCK+  +  +I+LL  M+  GC PDL++ +  +   
Sbjct: 497 MSQM--IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI--- 551

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                   DG          L K  +T    +++ VM+ K +SP T  +  +   L R  
Sbjct: 552 --------DG----------LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 593

Query: 650 RIQAAIN 656
           RI   I 
Sbjct: 594 RINKVIQ 600



 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 140/448 (31%), Positives = 236/448 (52%), Gaps = 14/448 (3%)

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           NLV+  +C  G VD A+ L R++P   CEPD+ +Y  ++ GLC   R      L++EM  
Sbjct: 233 NLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 292

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
             C P  VTFN LI+ LC+NG   R  +++  M   GC P+   Y T+I G+C +G+L+ 
Sbjct: 293 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEV 352

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +L+RM +    PN V Y T++ GL    R  +   +L  M ++   +++  ++ L+ 
Sbjct: 353 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 412

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              + G  +  ++L +QM+E GC P+ + Y+ +I+G C+ G  DEA  +L  M   GC  
Sbjct: 413 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 472

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  +Y+ ++KG   + +   A ++   M +  C  N + ++ LI+ LC+ G + +A  + 
Sbjct: 473 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 532

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            QML  GC PD+++YS++I GL  AG  +EAL+L N M  +     P+   Y+ + +AL 
Sbjct: 533 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM--VNKGMSPNTIIYSSIASALS 590

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL----------NE 605
           ++  I+  I + +++ D     D V  N  +++L ++ E  +   +FL          NE
Sbjct: 591 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGET-ERAIEFLAYMVSSGCVPNE 649

Query: 606 LAIRLFKRQRTSGGF-KIVEVMLQKFLS 632
               +  R   S GF K  + ML +  S
Sbjct: 650 STYTILIRGLASEGFVKEAQEMLTELCS 677



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 159/358 (44%), Gaps = 30/358 (8%)

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN ++ G C  G L+ A  L     A    PN  TY  ++  L   GR  D   VL  M 
Sbjct: 130 YNAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            R       +Y  ++    + G    A+++ + +  +GC  +    + +++ +C  G  D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA  +L ++ + GC  +  +Y++++KG   + +     E+ ++M +  C  N V ++ LI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
             LC +G       V  QM+  GC PD+  Y+++I G+C  G +E A ++ N M     K
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             P+V  YN LL  LC       + +LL  M D+ C  D VT NI +             
Sbjct: 367 --PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILV------------- 411

Query: 600 TDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            DF   N L  R+          +++E ML+    P   T+  V+   C+   I  A+
Sbjct: 412 -DFFCQNGLVDRV---------IELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 459


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/572 (27%), Positives = 290/572 (50%), Gaps = 27/572 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I  +   G+ K  + VL  M  +       ++  I     +A L++EAI L  +M
Sbjct: 217 TYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSM 276

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           VD+      + +++ ++N    E    R+ E    ++    + + P  +T+N +I    R
Sbjct: 277 VDKGLVP-DLYTYDILINGFCME---KRSREAKLMLLEMIDVGLKPEPITYNALIDGFMR 332

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A ++  EM     E ++  + TL++G+CK  ++++A+ ++ EM   G  P   T
Sbjct: 333 QGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQT 392

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +++LI G C+   + RA +L+D M  +   P  +TY+ +I+GLC  GNL    ++L  MV
Sbjct: 393 YSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV 452

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +   PN V Y T++    K GR  +   +L  M E+    + + Y++LI G  K  + E
Sbjct: 453 MNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRME 512

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A     +M+E+  +PN   Y A IDG  + G+ + A+    EM++ G   N   Y++L+
Sbjct: 513 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALI 572

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +G  + G   +A  +++ +     + +   YSVLIHGL  +GK+ EA  +++++  +G  
Sbjct: 573 EGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLL 632

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P+   Y+S+I G C  G+V++A +L  EM C++    PD+ TYNIL++ LCK   I  + 
Sbjct: 633 PNAFTYNSLISGSCKQGNVDKASQLLEEM-CIK-GINPDIVTYNILIDGLCKAGEIERAK 690

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
           +L + +  RG  P+ VT             A  DG            K +  +  F+++E
Sbjct: 691 NLFDDIEGRGLTPNCVT-----------YAAMVDG----------YCKSKNPTAAFQLLE 729

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            ML + + P    +  ++   C+ ++ + A++
Sbjct: 730 EMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 761



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 154/504 (30%), Positives = 261/504 (51%), Gaps = 13/504 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
            + +L+  +A  G  +   M+L RMR +   +L   F +  +   + KA  +EEA     
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQG--ILPDVFCYNSLIIGFCKAKRMEEARTYLM 519

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+ E   +    ++ + ++   + G    A  ++N +++     +LPN   +  +I+  
Sbjct: 520 EML-ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC---GVLPNVGIYTALIEGH 575

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ G V  A  +FR +  R    D+ TY  L+ GL +  ++ EA  +  E+Q  G  P  
Sbjct: 576 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 635

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+N LI+G CK G + +A++L++ M +KG  P+ VTYN LI GLC  G +++A +L D 
Sbjct: 636 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 695

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           +      PN VTY  +++G  K        ++L  M  R    + +IY+ +++   KE K
Sbjct: 696 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEK 755

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            E A+ L+++M+EKG   +TV ++ LI+G C+ GK  EA  +L EMI      N  TY+S
Sbjct: 756 FEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 814

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+    ++G   +A  +W +M + N +     Y+ L+HG    G + E   ++ +M+++G
Sbjct: 815 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 874

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP-DVFTYNILLNALCKQSNIS 561
            +PD + Y  MI   C  G+V EA KL +E+L    K  P  V  Y+ L+ ALCK+    
Sbjct: 875 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILV---KGMPMSVAAYDALIQALCKKEEFF 931

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIF 585
             + LLN + + G    L TC++ 
Sbjct: 932 EVLKLLNEIGESGFRLGLPTCSVI 955



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 151/552 (27%), Positives = 260/552 (47%), Gaps = 24/552 (4%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  +  +Y K   + EA+ +F      F  + ++ S NS+L  +++        + ++ +
Sbjct: 148 FDMLMDSYRKMGFLVEAVNVFLG-PKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGM 206

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              K   +LP+  T+  +I   C++G V +A ++  EM  + C P++ TY  ++ GLC+ 
Sbjct: 207 CAHK---VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRA 263

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             LDEA+ L   M   G  P   T+++LING C       A  ++  M   G  P  +TY
Sbjct: 264 RLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITY 323

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N LI G   +G++++A  + D MVA     N + + T++NG+ K G+      ++  M E
Sbjct: 324 NALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMME 383

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    +   YS LI G  +      A +L  +M ++   P  + YS +I+GLCR G    
Sbjct: 384 KGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 443

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
              IL EM+ NG   NA  Y++LM    + G+  ++  I + M +   + +  CY+ LI 
Sbjct: 444 TNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLII 503

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C+  ++ EAR    +ML R  +P+   Y + I G   AG +E A + FNEML      
Sbjct: 504 GFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC--GV 561

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL-------------- 586
            P+V  Y  L+   CK+ N++ +  +   ++ R    D+ T ++ +              
Sbjct: 562 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 621

Query: 587 --TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
             + L+EK   P   T   N L     K+       +++E M  K ++P   T+  ++  
Sbjct: 622 IFSELQEKGLLPNAFT--YNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDG 679

Query: 645 LCRPKRIQAAIN 656
           LC+   I+ A N
Sbjct: 680 LCKAGEIERAKN 691



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 248/510 (48%), Gaps = 7/510 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I      G+ +    +L  M           +  +  A+ K   VEE+ R+    
Sbjct: 427 TYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES-RMILER 485

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E      V  +NS+   II      R  E   +++      + PN  T+   I    +
Sbjct: 486 MREQGILPDVFCYNSL---IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSK 542

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A + F EM      P++  Y  L++G CKE  + EA  +   +          T
Sbjct: 543 AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 602

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++VLI+GL +NG++  A  +   +  KG LPN  TYN+LI G C +GN+DKA  LL+ M 
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ VTY  +I+GL K G       +   +E R    N   Y+ ++ G  K     
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 722

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A +L ++M+ +G  P+  +Y+ +++  C+  K ++A ++  EM+  G A+   ++++L+
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLI 781

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +G+ +SGK  +A  + ++M +   + N V Y+ LI   C+ G + EA+ +W +M  R   
Sbjct: 782 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 841

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P    Y+S++HG  N G++ E   LF EM+      +PD  TY ++++A C++ N+  + 
Sbjct: 842 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVA--KGIEPDKMTYYVMIDAYCREGNVMEAC 899

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            L + ++ +G    +   +  + AL +K E
Sbjct: 900 KLKDEILVKGMPMSVAAYDALIQALCKKEE 929



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 210/429 (48%), Gaps = 11/429 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN++ F++++ +  ++G +  A+ +F         P + +  +L+  L K N+++    +
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D M      P   T+  +I+  CK G +  A +++  M  KGC PN VTYN +I GLC 
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              LD+A+ L   MV    +P+  TY  +ING     R+ +   +L+ M +         
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI G  ++G  E A ++  +M+  G + N ++++ L++G+C+ GK ++A EI+ EM+
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   ++ TYS L++G        +A E+  +M K       + YSV+I+GLC  G L+
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
               +  +M+  G KP+ V Y++++      G VEE+  +   M   E    PDVF YN 
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERM--REQGILPDVFCYNS 500

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+   CK   +  +   L  M++R   P+  T   F+    +  E          E+A R
Sbjct: 501 LIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEM---------EIADR 551

Query: 610 LFKRQRTSG 618
            F    + G
Sbjct: 552 YFNEMLSCG 560



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 123/490 (25%), Positives = 223/490 (45%), Gaps = 42/490 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ + I  Y+ +G+ +  +     M     +     +  + + + K   V EA  +F  +
Sbjct: 532 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 591

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +      + V++++ +++ + + G  H A   ++ +   +   +LPN  T+N +I   C+
Sbjct: 592 LSR-RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL---QEKGLLPNAFTYNSLISGSCK 647

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD A QL  EM ++   PDI TY  L+DGLCK   ++ A  L D+++  G  P  VT
Sbjct: 648 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 707

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +++G CK+     A +L++ M L+G  P+   YN +++  C +   +KA+ L   M+
Sbjct: 708 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 767

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
             K   + V++ T+I G  K G+  +   +L  M E++F  N   Y++LI    K G   
Sbjct: 768 -EKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMG 826

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +LW +M E+   P    Y++L+ G   +G   E   +  EM+  G   +  T     
Sbjct: 827 EAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMT----- 881

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
                                         Y V+I   C +G + EA  +  ++L +G  
Sbjct: 882 ------------------------------YYVMIDAYCREGNVMEACKLKDEILVKGMP 911

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
             V AY ++I  LC      E LKL NE+   E   +  + T +++        N+  + 
Sbjct: 912 MSVAAYDALIQALCKKEEFFEVLKLLNEI--GESGFRLGLPTCSVIARGFQIAGNMDEAA 969

Query: 565 DLLNSMMDRG 574
           ++L SM+  G
Sbjct: 970 EVLRSMVKFG 979



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 159/328 (48%), Gaps = 4/328 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + ++N +++ + + G   RA   ++ I   +   + PN +T+  ++   C+      A Q
Sbjct: 670 IVTYNILIDGLCKAGEIERAKNLFDDI---EGRGLTPNCVTYAAMVDGYCKSKNPTAAFQ 726

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L  EM +R   PD + Y  +++  CKE + ++A+ L  EM   G F + V+FN LI G C
Sbjct: 727 LLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLIEGYC 785

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K+G+L  A  L++ M  K  +PN VTY +LI   C  G + +A  L   M     MP   
Sbjct: 786 KSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAK 845

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY ++++G   +G   + + +   M  +    ++  Y  +I    +EG   +A KL  ++
Sbjct: 846 TYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 905

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + KG   +   Y ALI  LC+  +  E  ++L E+  +G      T S + +GF  +G  
Sbjct: 906 LVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNM 965

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            +A E+ + M K   V N      L+ G
Sbjct: 966 DEAAEVLRSMVKFGWVSNTTSLGDLVDG 993



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 132/275 (48%), Gaps = 1/275 (0%)

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            P+   +N+++   C+    + A+ LF+EM  +     + ++ TL++G CK  +L EA  L
Sbjct: 738  PDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHL 796

Query: 250  LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            L+EM      P  VT+  LI+  CK G +G A +L   M  +  +P   TY +L+HG   
Sbjct: 797  LEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHN 856

Query: 310  KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             GN+ +  +L + MVA    P+++TY  +I+   + G  ++  ++   +  +   ++   
Sbjct: 857  IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAA 916

Query: 370  YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            Y  LI  L K+ +  + +KL  ++ E G +      S +  G    G  DEA E+L  M+
Sbjct: 917  YDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMV 976

Query: 430  NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
              G  +N  +   L+ G         +  + K MA
Sbjct: 977  KFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 156/514 (30%), Positives = 259/514 (50%), Gaps = 44/514 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA+  F+ M+ +     TV  FN +L  I +   +   L     +       I P+  
Sbjct: 51  LDEALSTFNRMLHKQPPPSTV-DFNRLLTSIAKTKHHSTLLSLSRQM---DSFGIPPDVY 106

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T  +VI ++C L  VD A     ++     +PD  T+ TL+ GLC E ++ EA+ L D+M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  LINGLCK G    A +L+ +M    C PN V ++TLI  LC    +
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A ++   M+     PN VTY ++I+GL KL        ++  M + K   + +  +T+
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEG   +A  +   M+ +G +PN V Y+AL+DG C   + D A ++   M++  C
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
            AN  +Y++L+ G+ +     KA+ ++++M++     N V Y+ LIHGLC  G+L++A  
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 494 VWTQMLSRG---------------CK--------------------PDVVAYSSMIHGLC 518
           ++ +M++RG               CK                    PD+  Y++++ G+C
Sbjct: 407 LFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMC 466

Query: 519 NAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
            AG +E+A  LF+    L  K  QP+V+TYNI+++ LCKQ  ++ +  L + M   GC P
Sbjct: 467 RAGELEDARDLFSN---LSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           +  T N+         EA +   + L E+  R F
Sbjct: 524 NDCTYNLITRGFLRNNEALRT-IELLEEMLARGF 556



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/446 (30%), Positives = 232/446 (52%), Gaps = 11/446 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F +++  +  EG    AL  ++ ++        PN +T+  +I  +C++G    AI+L 
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGE---GFQPNVVTYGTLINGLCKVGNTSAAIRLL 198

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R M   NC+P++  + TL+D LCK+ ++ EA  +  EM   G  P  VT+N LI+GLCK 
Sbjct: 199 RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            E      L++ M     +P+  T NT++  LC +G + +A  ++D M+     PN VTY
Sbjct: 259 CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY 318

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +++G           +V  +M  +    N   Y+TLI+G  K    + AM L+++M  
Sbjct: 319 NALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSR 378

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +   PNTV Y+ LI GLC VG+  +A  +  EM+  G   +  TY +L     ++    K
Sbjct: 379 QELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDK 438

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ + K +  +N   +   Y+ ++ G+C  G+L +AR +++ + S+G +P+V  Y+ MIH
Sbjct: 439 AMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIH 498

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  G + EA KLF+EM   +    P+  TYN++     + +    +I+LL  M+ RG 
Sbjct: 499 GLCKQGLLAEASKLFSEM--NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGF 556

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTD 601
             D+ T  + +  L +      DG D
Sbjct: 557 SVDVSTTTLLVGMLSD------DGLD 576



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/412 (31%), Positives = 213/412 (51%), Gaps = 12/412 (2%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVE 135
           +Q    T+ +LI      G+  +   +L  M +   +  VV+   F  +  +  K   V 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVV---FSTLIDSLCKDRQVT 227

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA  +F  M+ +      + ++NS+++ + +   +       N +V++K   I+P+  T 
Sbjct: 228 EAFNIFSEMITK-GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK---IMPDVFTL 283

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N V+  +C+ G+V  A  +   M  R  EP++ TY  LMDG C  N +D AV + D M  
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
             C    +++N LING CK   + +A  L + M  +   PN VTYNTLIHGLC  G L  
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEYIYSTLI 374
           A+SL   MVA   +P+ VTY T+ + L K  R +D A  L+ ++E   +  +  IY+T++
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTLSDYLCK-NRHLDKAMALLKAIEGSNWDPDIQIYTTIL 462

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G+ + G+ EDA  L+  +  KG +PN   Y+ +I GLC+ G   EA ++  EM  NGC+
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 522

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            N  TY+ + +GF  + +  + +E+ ++M       +    ++L+  L +DG
Sbjct: 523 PNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 234/461 (50%), Gaps = 9/461 (1%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
           KLG +Q   +TF +LI+     G       +  +M  E       ++  +     K    
Sbjct: 133 KLG-HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 191

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
             AIRL  +M ++ +C+  V  F+++++ + ++     A   ++ ++      I PN +T
Sbjct: 192 SAAIRLLRSM-EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITK---GISPNIVT 247

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I  +C+L    +   L  EM      PD++T  T++D LCKE  + EA  ++D M 
Sbjct: 248 YNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMI 307

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  VT+N L++G C   E+  A K+ D M  K C+ N ++YNTLI+G C   ++D
Sbjct: 308 HRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVD 367

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA+ L + M   +  PN VTY T+I+GL  +GR  D   +   M  R    +   Y TL 
Sbjct: 368 KAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLS 427

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L K    + AM L K +      P+  +Y+ ++DG+CR G+ ++A ++   + + G  
Sbjct: 428 DYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQ 487

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N +TY+ ++ G  + G   +A +++ +M KN C  N+  Y+++  G   + +      +
Sbjct: 488 PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIEL 547

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
             +ML+RG   D V+ ++++ G+ +   +++++K   ++LC
Sbjct: 548 LEEMLARGFSVD-VSTTTLLVGMLSDDGLDQSVK---QILC 584



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 182/358 (50%), Gaps = 16/358 (4%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD+A+S  +RM+  +  P+ V +  ++  + K         +   M+      + Y  + 
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +I+ L    + + A     ++++ G +P+   ++ LI GLC  GK  EA  +  +MI  G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  TY +L+ G  + G    A+ + + M + NC  N V +S LI  LC+D ++ EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++++M+++G  P++V Y+S+IHGLC     +    L NEM+  + K  PDVFT N +++
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV--DSKIMPDVFTLNTVVD 288

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFL------- 603
           ALCK+  ++ + D+++ M+ RG +P++VT N  +    L+ +++      D +       
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVA 348

Query: 604 -----NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                N L     K Q       + E M ++ L+P T T+  ++  LC   R+Q AI+
Sbjct: 349 NVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 197/437 (45%), Gaps = 19/437 (4%)

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           N LDEA+   + M      P+ V FN L+  + K         L   M   G  P+  T 
Sbjct: 49  NTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTL 108

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
             +I+ LC    +D A S L +++     P+  T+ T+I GL   G+  +   +   M  
Sbjct: 109 AIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIG 168

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
             F  N   Y TLI+GL K G    A++L + M +  C+PN VV+S LID LC+  +  E
Sbjct: 169 EGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE 228

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  I  EMI  G + N  TY+SL+ G  +  +      +  +M  +  + +    + ++ 
Sbjct: 229 AFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVD 288

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC++G + EA  V   M+ RG +P+VV Y++++ G C    V+ A+K+F+ M  +    
Sbjct: 289 ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM--VHKDC 346

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
             +V +YN L+N  CK  ++  ++ L   M  +   P+ VT N  +  L   +   QD  
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCH-VGRLQDAI 405

Query: 601 DFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
              +E+  R               L K +       +++ +      P    +  ++  +
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 646 CRPKRIQAAINKCWSNL 662
           CR   ++ A    +SNL
Sbjct: 466 CRAGELEDA-RDLFSNL 481


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/500 (29%), Positives = 247/500 (49%), Gaps = 40/500 (8%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           + +  P+ G   +    ++ +++     G F+S   VL  +      +   +   +  A 
Sbjct: 144 VLDEMPRRGCAPI-PPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAI 202

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
                V++A+ L   +   F C+  V S+N+VL  +     +    E    +V    M  
Sbjct: 203 CDQGSVDKALHLLRDL-PSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMV---RMAC 258

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN +TFN +I  +CR GL +   ++  +M    C PDI  Y T++DG+CKE  L  A  
Sbjct: 259 PPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHE 318

Query: 249 LLDEMQVDG------CFPT-----------------------------PVTFNVLINGLC 273
           +L+ M   G      C+ T                              VTFN+L++  C
Sbjct: 319 ILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFC 378

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           +NG + R  +L++ M + GC+P+ +TY T+I+G C +G +D+AV LL  M A  C PN +
Sbjct: 379 QNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTI 438

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           +Y  ++ GL    R VD   ++  M ++   +N   ++TLI+ L K+G  E A++L KQM
Sbjct: 439 SYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQM 498

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +  GC P+ + YS +IDGL + GK DEA E+L  M+N G + N   YSS+       G+ 
Sbjct: 499 LVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRI 558

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           +K ++++ ++       + V Y+ +I  LC+ G+   A      M+S GC P+   Y+ +
Sbjct: 559 NKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTIL 618

Query: 514 IHGLCNAGSVEEALKLFNEM 533
           I GL + G V+EA ++  E+
Sbjct: 619 IRGLASEGFVKEAQEMLTEL 638



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 250/487 (51%), Gaps = 23/487 (4%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +  +    A  + + PN  T+  V++ +C  G + +A+ +  EMP R C P    
Sbjct: 100 YCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPM 159

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  +++  C+      AV +L+++   GC       N+++N +C  G + +A  L+ ++ 
Sbjct: 160 YHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLP 219

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC P+ V+YN ++ GLC+         L++ MV   C PN VT+ T+I+ L + G   
Sbjct: 220 SFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFE 279

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               VL  M E     +  +Y+T+I G+ KEG  + A ++  +M   G KPN V Y+ L+
Sbjct: 280 RVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLL 339

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   + +E EE+L EM +  C  +  T++ L+  F ++G   + +E+ + M  + C+
Sbjct: 340 KGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCM 399

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + + Y+ +I+G C++G + EA M+   M + GCKP+ ++Y+ ++ GLC+A    +A  L
Sbjct: 400 PDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDL 459

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++M  ++     +  T+N L+N LCK+  +  +I+LL  M+  GC PDL++ +  +   
Sbjct: 460 MSQM--IQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI--- 514

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                   DG          L K  +T    +++ VM+ K +SP T  +  +   L R  
Sbjct: 515 --------DG----------LGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556

Query: 650 RIQAAIN 656
           RI   I 
Sbjct: 557 RINKVIQ 563



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 234/448 (52%), Gaps = 14/448 (3%)

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           NLV+  +C  G VD A+ L R++P   CEPD+ +Y  ++ GLC   R      L++EM  
Sbjct: 196 NLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR 255

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
             C P  VTFN LI+ LC+NG   R  +++  M   GC P+   Y T+I G+C +G+L  
Sbjct: 256 MACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKV 315

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +L+RM +    PN V Y T++ GL    R  +   +L  M ++   +++  ++ L+ 
Sbjct: 316 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              + G  +  ++L +QM+  GC P+ + Y+ +I+G C+ G  DEA  +L  M   GC  
Sbjct: 376 FFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  +Y+ ++KG   + +   A ++   M +  C  N + ++ LI+ LC+ G + +A  + 
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            QML  GC PD+++YS++I GL  AG  +EAL+L N M  +     P+   Y+ + +AL 
Sbjct: 496 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVM--VNKGMSPNTIIYSSIASALS 553

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL----------NE 605
           ++  I+  I + +++ D     D V  N  +++L ++ E  +   +FL          NE
Sbjct: 554 REGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGET-ERAIEFLAYMVSSGCVPNE 612

Query: 606 LAIRLFKRQRTSGGF-KIVEVMLQKFLS 632
               +  R   S GF K  + ML +  S
Sbjct: 613 STYTILIRGLASEGFVKEAQEMLTELCS 640



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 150/315 (47%), Gaps = 36/315 (11%)

Query: 300 YNTLIHG--------------------------------LCLKGNLDKAVSLLDRMVASK 327
           YN ++ G                                LC +G +  A+++LD M    
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C P    Y  I+    + G      RVL  +  R   ++    + +++ +  +G  + A+
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKAL 212

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L + +   GC+P+ V Y+A++ GLC   +    +E++ EM+   C  N  T+++L+   
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
             +G   +  E+   MA++ C  +   Y+ +I G+C++G L+ A  +  +M S G KP+V
Sbjct: 273 CRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNV 332

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP-DVFTYNILLNALCKQSNISHSIDL 566
           V Y++++ GLC+A   EE  +L  EM     K  P D  T+NIL++  C+   +   I+L
Sbjct: 333 VCYNTLLKGLCSAERWEETEELLAEMF---DKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 567 LNSMMDRGCDPDLVT 581
           L  M+  GC PD++T
Sbjct: 390 LEQMLVHGCMPDVIT 404


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 142/427 (33%), Positives = 219/427 (51%), Gaps = 6/427 (1%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  ++N+++K +C  G V++A QLF EM      PD+ TY  L+ G C    L+ AV LL
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMA---SPPDVVTYGILIHGYCALGELENAVKLL 317

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+M   G  P    +  ++  LC  G +  A  +V++M     + +E  Y T++ G C K
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G+L  A    D M       + VTY T+INGL + G   +  +VL  M  R+  V+E  Y
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + L+ G  K GK  +A ++   M+++G  PN V Y+AL DGLC+ G    A E+L EM N
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   NA TY+SL+ G  ++G   +A+    DM       +   Y+ LI  LC+ G+L  
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +ML  G KP +V Y+ +++G C +G VE   KL   M  LE    P+  TYN L
Sbjct: 558 AHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWM--LEKNIHPNATTYNSL 615

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +   C  +N+  + ++   M  R  +P+  T NI +     K  + ++   F NE+  + 
Sbjct: 616 MKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKG-HCKARSMKEAQYFHNEMIEKG 674

Query: 611 FKRQRTS 617
           F+   +S
Sbjct: 675 FRLTASS 681



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 207/404 (51%), Gaps = 30/404 (7%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           LDEA+ L   +          ++N+L+  LC  G +  A +L D M      P+ VTY  
Sbjct: 247 LDEAIELFQGLPDKNV----CSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGI 299

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LIHG C  G L+ AV LLD MVA    PN   Y +++  L   GR  D   V+  M   K
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
             ++E +Y+T++SG   +G    A + + +M  KG   + V Y+ LI+GLCR G+  EAE
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAE 419

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           ++L EM+      +  TY+ L+ G+ + GK  +A ++   M +     N V Y+ L  GL
Sbjct: 420 KVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGL 479

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C+ G ++ A  +  +M ++G + +   Y+S+I+GLC AG +++A++   +M     K  P
Sbjct: 480 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLK--P 537

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           DV+TY  L++ALCK   +  + DLL  M+D G  P +VT N+ +                
Sbjct: 538 DVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGF------------- 584

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                       R  GG K++E ML+K + P  +T+  ++++ C
Sbjct: 585 --------CMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYC 620



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 230/441 (52%), Gaps = 13/441 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EAI LF  + D+  C     S+N +L V+   G    A + ++ + +       P+ +
Sbjct: 247 LDEAIELFQGLPDKNVC-----SYNILLKVLCGAGRVEDARQLFDEMASP------PDVV 295

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+ ++I   C LG ++NA++L  +M  R  EP+   Y +++  LC + R+ +A+ ++++M
Sbjct: 296 TYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDM 355

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                      +  +++G C  G+L  A +  D M  KG   + VTY TLI+GLC  G L
Sbjct: 356 VHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGEL 415

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  +L  M+A +   +EVTY  +++G  K G+  +  +V  +M +R    N   Y+ L
Sbjct: 416 KEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTAL 475

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
             GL K+G  + A +L  +M  KG + N   Y++LI+GLC+ G  D+A   + +M   G 
Sbjct: 476 SDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGL 535

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             + +TY++L+    +SG+  +A ++ ++M  N      V Y+VL++G C  G++   + 
Sbjct: 536 KPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKK 595

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   ML +   P+   Y+S++   C   +++   +++  M       +P+  TYNIL+  
Sbjct: 596 LLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSR--NVEPNENTYNILIKG 653

Query: 554 LCKQSNISHSIDLLNSMMDRG 574
            CK  ++  +    N M+++G
Sbjct: 654 HCKARSMKEAQYFHNEMIEKG 674



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 242/510 (47%), Gaps = 22/510 (4%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           L++    +G  +    +   M     VV     I  + A G+   +E A++L   MV   
Sbjct: 268 LLKVLCGAGRVEDARQLFDEMASPPDVVTYGILIHGYCALGE---LENAVKLLDDMVAR- 323

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
             +     + SV+ ++  +G    AL     +V   H  ++ +   +  V+   C  G +
Sbjct: 324 GVEPNATVYTSVVALLCDKGRVSDALTVVEDMV---HHKVILDEAVYTTVLSGFCNKGDL 380

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
            +A + F EM  +    D  TY TL++GLC+   L EA  +L EM         VT+ VL
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVL 440

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           ++G CK G++  A ++ + M  +G  PN VTY  L  GLC +G++  A  LL  M     
Sbjct: 441 VDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL 500

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             N  TY ++INGL K G      R +  M+      + Y Y+TLI  L K G+ + A  
Sbjct: 501 ELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHD 560

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L ++M++ G KP  V Y+ L++G C  G+ +  +++L  M+      NA TY+SLMK + 
Sbjct: 561 LLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYC 620

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
                    EI+K M   N   NE  Y++LI G C+   ++EA+    +M+ +G +    
Sbjct: 621 IGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTAS 680

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +YS++I  L       EA KLF++M      ++PDV+ + I  N    + N+  ++ L  
Sbjct: 681 SYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFN--FNEDNLEATLAL-- 736

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
                 CD +LV  +I    +K K E  QD
Sbjct: 737 ------CD-ELVEASI----VKSKAEMDQD 755



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 30/271 (11%)

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A++L++ + +K    N   Y+ L+  LC  G+ ++A ++  EM +     +  TY  L
Sbjct: 248 DEAIELFQGLPDK----NVCSYNILLKVLCGAGRVEDARQLFDEMAS---PPDVVTYGIL 300

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G+   G+   AV++  DM       N   Y+ ++  LC+ G++ +A  V   M+    
Sbjct: 301 IHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKV 360

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             D   Y++++ G CN G +  A + F+EM         D  TY  L+N LC+   +  +
Sbjct: 361 ILDEAVYTTVLSGFCNKGDLVSARRWFDEMQ--RKGLATDGVTYTTLINGLCRAGELKEA 418

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
             +L  M+ R  D D VT  + +           DG            KR + +  F++ 
Sbjct: 419 EKVLQEMLARRLDVDEVTYTVLV-----------DG----------YCKRGKMAEAFQVH 457

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M+Q+ ++P   T+  +   LC+   +QAA
Sbjct: 458 NTMVQRGVAPNVVTYTALSDGLCKQGDVQAA 488


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 160/494 (32%), Positives = 243/494 (49%), Gaps = 37/494 (7%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMR----REKRVVLEKSFIFIFKAYGKAHL-----VEE 136
           F SLI  Y  SGD+     +L +M     +   VV     I I    G   L     +E 
Sbjct: 372 FNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYN---ILIGGICGNEKLPSLDVLEL 428

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A + +  M+D  H      + +++   +   G + +A   Y+ I        +P+T T++
Sbjct: 429 AEKAYGEMLDA-HVVLNKVNVSNLARCLCGAGKFEKA---YSIIREMMSKGFIPDTSTYS 484

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            VI  +C    VDNA  LF EM   +  PD++TY  L+D  CK   L +A    DEM  D
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRD 544

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           GC P  VT+  LI+   K  ++  A +L + M  +GC+PN VTY  LI G C  G ++KA
Sbjct: 545 GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKA 604

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             +  RM  +  +P+   Y  I +G ++                     N + Y  L+ G
Sbjct: 605 CQIYARMRGNADIPDVDMYFKIDDGNIR-------------------DPNIFTYGALVDG 645

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K  K ++A  L   M  +GC+PN +VY ALIDG C+VGK DEA+ +  +M   G   N
Sbjct: 646 LCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPN 705

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            +TYSSL+   F+  +   A+++   M +N+C  N + Y+ +I GLC+ GK  EA  + +
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M  +GC P+VV Y++MI G   AG V++ L+L  +M        P+  TY +L+N  C 
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMG--AKGCAPNFVTYRVLINHCCA 823

Query: 557 QSNISHSIDLLNSM 570
              +  +  LL+ M
Sbjct: 824 AGLLDDAHQLLDEM 837



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 153/572 (26%), Positives = 257/572 (44%), Gaps = 81/572 (14%)

Query: 157 FNSVLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
              +LNV+I++    GL++ ALE    +   K +   P+ LT+N +++       +D A 
Sbjct: 196 LGKLLNVLIRKCCRNGLWNVALEELGRL---KDLGYKPSRLTYNALVRVFLEADRLDTAY 252

Query: 213 QLFREMPVRNCEPDIYT--------------------------------YCTLMDGLCKE 240
            + REM       D YT                                Y  ++ GLC+ 
Sbjct: 253 LVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEA 312

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +  +EA+  L  M+   C P  VT+ +L+ G  +  +LGR  +++  M  +GC P+   +
Sbjct: 313 SLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIF 372

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+LIH  C  G+   A  LL +M    C P  V Y  +I G+   G     +  ++ + E
Sbjct: 373 NSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGIC--GNEKLPSLDVLELAE 430

Query: 361 RKF------HV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           + +      HV  N+   S L   L   GK E A  + ++MM KG  P+T  YS +I  L
Sbjct: 431 KAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLL 490

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   K D A  +  EM +N    + FTY+ L+  F + G   +A + + +M ++ C  N 
Sbjct: 491 CNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNV 550

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LIH   +  K+  A  ++  MLS GC P+VV Y+++I G C +G +E+A +++  
Sbjct: 551 VTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR 610

Query: 533 M------------LCLEPKS--QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           M              ++  +   P++FTY  L++ LCK   +  + DLL+ M   GC+P+
Sbjct: 611 MRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPN 670

Query: 579 LVT----------------CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
            +                   +  T + E+   P   T   + L  RLFK +R     K+
Sbjct: 671 HIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYT--YSSLIDRLFKDKRLDLALKV 728

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  ML+   +P    +  ++  LC+  +   A
Sbjct: 729 LSRMLENSCAPNVIIYTEMIDGLCKVGKTDEA 760



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 227/493 (46%), Gaps = 40/493 (8%)

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           Y  +++A   +++ N +  + + + +C  G  + A  + REM  +   PD  TY  ++  
Sbjct: 433 YGEMLDA---HVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGL 489

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC  +++D A LL +EM+ +   P   T+ +LI+  CK G L +A K  D M   GC PN
Sbjct: 490 LCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPN 549

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VTY  LIH       +  A  L + M++  C+PN VTY  +I+G  K G+     ++  
Sbjct: 550 VVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYA 609

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M       +  +Y  +  G  ++                   PN   Y AL+DGLC+  
Sbjct: 610 RMRGNADIPDVDMYFKIDDGNIRD-------------------PNIFTYGALVDGLCKAH 650

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K  EA ++L  M   GC  N   Y +L+ GF + GK  +A  ++  M++     N   YS
Sbjct: 651 KVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYS 710

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            LI  L +D +L  A  V ++ML   C P+V+ Y+ MI GLC  G  +EA +L + M   
Sbjct: 711 SLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMME-- 768

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
           E    P+V TY  +++   K   +   ++L+  M  +GC P+ VT  + +          
Sbjct: 769 EKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAA-GLL 827

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL--------------SPQTSTWERVV 642
            D    L+E+  + +  +  +G  K++E   ++F+               P    +  ++
Sbjct: 828 DDAHQLLDEMK-QTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILI 886

Query: 643 QELCRPKRIQAAI 655
              C+  R++ A+
Sbjct: 887 DSFCKAGRLELAL 899



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 255/518 (49%), Gaps = 42/518 (8%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           ST+  +I    N+    +  ++   M+    V    ++  +  ++ K  L+++A + F  
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV +  C   V ++ ++++  ++      A E +  +++      +PN +T+  +I   C
Sbjct: 541 MVRD-GCAPNVVTYTALIHAYLKARKMSSANELFEMMLSE---GCIPNVVTYTALIDGHC 596

Query: 204 RLGLVDNAIQLFREMP------------------VRNCEPDIYTYCTLMDGLCKENRLDE 245
           + G ++ A Q++  M                   +R  +P+I+TY  L+DGLCK +++ E
Sbjct: 597 KSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIR--DPNIFTYGALVDGLCKAHKVKE 654

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  LLD M V+GC P  + ++ LI+G CK G+L  A  +   M  +G  PN  TY++LI 
Sbjct: 655 ARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLID 714

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
            L     LD A+ +L RM+ + C PN + Y  +I+GL K+G+  +  R++  MEE+  H 
Sbjct: 715 RLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHP 774

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y+ +I G  K GK +  ++L +QM  KGC PN V Y  LI+  C  G  D+A ++L
Sbjct: 775 NVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLL 834

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM       +   Y  +++GF  + +   ++ +  ++A+N  V     Y +LI   C+ 
Sbjct: 835 DEMKQTYWPKHMAGYRKVIEGF--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKA 892

Query: 486 GKLREARMVWTQMLS--RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           G+L  A  +  +M S       D   YSS+I  L  A  V++A +L+ +M+      +  
Sbjct: 893 GRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELS 952

Query: 544 VFTYNI--------------LLNALCKQSNISHSIDLL 567
           +F Y +              L + +C+  ++S+S  L+
Sbjct: 953 IFFYLVKGLIRINRWEEALQLSDCICQMVHVSNSSSLI 990



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 211/453 (46%), Gaps = 43/453 (9%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           KR +     +L+++I EG Y                   P+   FN +I   CR G    
Sbjct: 347 KRQLGRCKRILSMMITEGCY-------------------PSRRIFNSLIHAYCRSGDYSY 387

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA-VLLLDEMQVDGCFPTPVTFNV-- 267
           A +L ++M    C+P    Y  L+ G+C   +L    VL L E          V  N   
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVN 447

Query: 268 ---LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
              L   LC  G+  +A  ++  M  KG +P+  TY+ +I  LC    +D A  L + M 
Sbjct: 448 VSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMK 507

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           ++  +P+  TY  +I+   K+G      +    M       N   Y+ LI    K  K  
Sbjct: 508 SNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS 567

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM--------------IN 430
            A +L++ M+ +GC PN V Y+ALIDG C+ G+ ++A +I   M              I+
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKID 627

Query: 431 NGCA--ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +G     N FTY +L+ G  ++ K  +A ++   M+   C  N + Y  LI G C+ GKL
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EA+MV+T+M  RG  P+V  YSS+I  L     ++ ALK+ + ML  E    P+V  Y 
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRML--ENSCAPNVIIYT 745

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            +++ LCK      +  L++ M ++GC P++VT
Sbjct: 746 EMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/490 (30%), Positives = 251/490 (51%), Gaps = 31/490 (6%)

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++ A  ++   N +T+  +I   CR G + +A+ L   MPV    PD YTY T++ GLC
Sbjct: 165 RVLEAAKVSGAANVVTYTALINGYCRSGRLADALNLIASMPV---APDTYTYNTVLKGLC 221

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
              + ++A  L++EM  + C P  VTF   I   C+NG L  A +L++ M   GC P+ V
Sbjct: 222 GAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVV 281

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y+TL++G   +G +D A+ LL+ M+   C PN V Y   + GL    R  D   ++  M
Sbjct: 282 IYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGLCMAERWKDVGELIAEM 338

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             +    NE  +S L S L + G  + AM++ +QM + GC+P+ V+Y+ LI+     G+ 
Sbjct: 339 VRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRV 398

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A  +L  M+   C  +  ++++ +K    + + +   E+   M + +C   E+ +++L
Sbjct: 399 DDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNIL 455

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I  LC+ G +  A  V+ QM    C PD+V YSS+I+G    G VE A++LF  M C   
Sbjct: 456 IDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPC--- 512

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK------ 592
             +PD+F+YN +L  LC+ +    + +L+ +M  + C P+ +T NI + +L +K      
Sbjct: 513 --KPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRA 570

Query: 593 ----LEAPQDGTD---FLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
                + P+ G+    F     I  F  Q R      ++  M  K   P   ++   ++ 
Sbjct: 571 IEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCK---PDAISYNSTLKG 627

Query: 645 LCRPKRIQAA 654
           LCR +R + A
Sbjct: 628 LCRAERWKEA 637



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 256/528 (48%), Gaps = 55/528 (10%)

Query: 88  SLIQHYANSGDFKSLEMVL--YRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           +L+  Y   G     E VL   ++     VV   ++  +   Y ++  + +A+ L  +M 
Sbjct: 149 TLVAGYCRDGRLADAERVLEAAKVSGAANVV---TYTALINGYCRSGRLADALNLIASM- 204

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
                     ++N+VL  +     + +A E    ++     N  PN +TF   I++ C+ 
Sbjct: 205 ---PVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMI---RNNCHPNEVTFATQIRSFCQN 258

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           GL+D+A+QL   MP   C PD+  Y TL++G  ++ R+D+A++LL+ M    C P  V +
Sbjct: 259 GLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCY 315

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N  + GLC         +L+  M  K C PNE T++ L   LC  G +D A+ ++++M  
Sbjct: 316 NAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQK 375

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM------------------EERKFHVNE 367
             C P+ V Y T+IN   + GR  D   +L SM                   ER + V E
Sbjct: 376 YGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYDVEE 435

Query: 368 YI--------------YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
            I              ++ LI  L + G    A+++++QM +  C P+ V YS+LI+G  
Sbjct: 436 LIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFS 495

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
             G  + A E+   M    C  + F+Y++++KG   + +   A E+  +MA+ +C  NE+
Sbjct: 496 EQGLVESAIELFQSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEI 552

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +++LI+ LC+ G    A  V+ QM   G  PD+  Y+++I+G    G +++AL L + M
Sbjct: 553 TFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTM 612

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            C     +PD  +YN  L  LC+      + +++  M+ + C P+ VT
Sbjct: 613 SC-----KPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVT 655



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 190/423 (44%), Gaps = 80/423 (18%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF + I+ +  +G       +L RM R      VV+  + +  F   G+   V++A+ L 
Sbjct: 247 TFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQGR---VDDALVLL 303

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           +TM+    CK     +N+ L  +     +    E    +V     +  PN  TF+++   
Sbjct: 304 NTML----CKPNTVCYNAALKGLCMAERWKDVGELIAEMV---RKDCPPNEATFSMLTSC 356

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+ GLVD A+++  +M    C PD+  Y TL++   ++ R+D+A++LLD M    C P 
Sbjct: 357 LCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPD 413

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            ++FN  +  LC+        +L+  M  + C   E+T+N LI  LC  G ++ A+ + +
Sbjct: 414 TISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFE 473

Query: 322 RMVASKCMPNEVTYGTIING--------------------------------LVKLGRAV 349
           +M   +C P+ VTY ++ING                                L +  R  
Sbjct: 474 QMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMPCKPDIFSYNAVLKGLCRAARWE 533

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG------------ 397
           D   ++ +M  +    NE  ++ LI+ L ++G A+ A++++KQM E G            
Sbjct: 534 DAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALI 593

Query: 398 --------------------CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
                               CKP+ + Y++ + GLCR  +  EAEEI+ EM+   C  N 
Sbjct: 594 NGFSEQGRLDDALNLLSTMSCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNE 653

Query: 438 FTY 440
            T+
Sbjct: 654 VTF 656



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 172/354 (48%), Gaps = 30/354 (8%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           +LD A+ L+  M +S+  P  +    +I  L    R  D  RVL +++E     +   ++
Sbjct: 91  DLDAALRLVGSMPSSE-PPAVIACNILIKKLCAHRRLADAERVLDALKESG-SADAVSHN 148

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           TL++G  ++G+  DA ++ +     G   N V Y+ALI+G CR G+  +A  ++  M   
Sbjct: 149 TLVAGYCRDGRLADAERVLEAAKVSGAA-NVVTYTALINGYCRSGRLADALNLIASM--- 204

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
             A + +TY++++KG   + +  KA E+ ++M +NNC  NEV ++  I   C++G L  A
Sbjct: 205 PVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHA 264

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +  +M   GC PDVV YS++++G    G V++AL L N MLC     +P+   YN  L
Sbjct: 265 VQLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLC-----KPNTVCYNAAL 319

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPD---------------LVTCNIFLTALKEKLEAP 596
             LC         +L+  M+ + C P+               LV C + +    +K    
Sbjct: 320 KGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCR 379

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
            D   + N L     ++ R      +++ ML    +P T ++   ++ LCR +R
Sbjct: 380 PDVVIY-NTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTER 429


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/548 (27%), Positives = 253/548 (46%), Gaps = 65/548 (11%)

Query: 143 TMVDEFHC---KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            ++DE  C   K  V  + ++++  ++EG    A +    +V A    + PN +T++ ++
Sbjct: 208 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA---GVQPNKITYDNLV 264

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           + +C++G +D A  L ++M   +  PD  TY  +++G  + +   +A  LL EM+  G  
Sbjct: 265 RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGIS 324

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   T++++I+GLC++GE  +A+ L++ M  KG  PN   Y  LI G C +GN+  A  +
Sbjct: 325 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 384

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            D+M     +P+   Y ++I GL K+GR  +  +    M+ER    NE+ YS LI G  K
Sbjct: 385 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 444

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTV-----------------------------------V 404
            G  E A +L ++M++ G KPN V                                   +
Sbjct: 445 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRI 504

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y  LI  L   G  + A  +L E+  NG   +   YSSL+ G  ++    KA  I  +M+
Sbjct: 505 YGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 564

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           K     N VCY+ LI GLC+ G +  AR V+  +L++G  P+ V Y+S+I G C  G + 
Sbjct: 565 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDIS 624

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
            A  L+NEML       PD F Y++L        ++  ++ L+  M  RG          
Sbjct: 625 NAFYLYNEMLA--TGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG---------- 672

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
                              N L     KR +     K++ V++ + L P   T E ++  
Sbjct: 673 ------------HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISG 720

Query: 645 LCRPKRIQ 652
           L    ++ 
Sbjct: 721 LSEAGKLS 728



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 161/548 (29%), Positives = 260/548 (47%), Gaps = 22/548 (4%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y K+  V++A  +   M D      +++  N++L  +++        +    +V A
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDR-GLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               I P+  T++ +I+  C++   D A ++  EM  R C  +  TY  L+ GLC+   +
Sbjct: 112 ---GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 168

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA     +M+  G  P   T+  LINGLCK+     A  L+D M      PN V Y  L
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G   +GN D+A  ++  MVA+   PN++TY  ++ GL K+G+ +D A +L+    R  
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ-MDRASLLLKQMVRDS 287

Query: 364 HVNEYI-YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
           H  + I Y+ +I G F+    +DA +L  +M   G  PN   YS +I GLC+ G+P++A 
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           ++L EM   G   NAF Y+ L+ G+   G    A EI+  M K N + +  CY+ LI GL
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            + G++ E+   + QM  RG  P+   YS +IHG    G +E A +L   M  L+   +P
Sbjct: 408 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM--LDTGLKP 465

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL----------TALKEK 592
           +   Y  LL +  K  +I        SM+D+G   D     I +           A +  
Sbjct: 466 NDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 525

Query: 593 LEAPQDGT----DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
            E  ++G+       + L   L K       F I++ M +K + P    +  ++  LC+ 
Sbjct: 526 SEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 585

Query: 649 KRIQAAIN 656
             I  A N
Sbjct: 586 GDISYARN 593



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 200/411 (48%), Gaps = 12/411 (2%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
           HRAL    H   A            ++++ T  + G V +A ++   M  R   P I   
Sbjct: 36  HRALSDSGHRSPA----------VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCC 85

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             L+  L + + +     + + M   G  P   T++ LI   CK  E   A K++  M  
Sbjct: 86  NALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE 145

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +GC  N VTYN LI GLC  G +++A      M     +P+  TYG +INGL K  R+ +
Sbjct: 146 RGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNE 205

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +L  M   +   N  +Y+ LI G  +EG A++A K+ K+M+  G +PN + Y  L+ 
Sbjct: 206 AKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVR 265

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC++G+ D A  +L +M+ +    +  TY+ +++G F       A  +  +M       
Sbjct: 266 GLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISP 325

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N   YS++IHGLC+ G+  +A  +  +M ++G KP+   Y+ +I G C  G+V  A ++F
Sbjct: 326 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 385

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           ++M   +    PD++ YN L+  L K   +  S      M +RG  P+  T
Sbjct: 386 DKM--TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 434



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/451 (24%), Positives = 202/451 (44%), Gaps = 61/451 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y  +GD +S E ++ RM        +  +I + ++Y K+  +E+    F +M
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +D+                                        ++ +   + ++I  +  
Sbjct: 494 LDQ---------------------------------------GVMLDNRIYGILIHNLSS 514

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A ++  E+      PD++ Y +L+ GLCK    ++A  +LDEM   G  P  V 
Sbjct: 515 SGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 574

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+GLCK+G++  A  + +++  KG +PN VTY +LI G C  G++  A  L + M+
Sbjct: 575 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 634

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER--KFHVNEYIYSTLISGLFKEGK 382
           A+   P+   Y  +  G    G   D  + +  +EE   + H +   ++ L+ G  K GK
Sbjct: 635 ATGITPDAFVYSVLTTGCSSAG---DLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGK 691

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++ +KL   +M +G  PN +    +I GL   GK  E   I  E+      + A  +SS
Sbjct: 692 MQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 751

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L       GK    +++  DM +++               C++G L +A M+   ++++ 
Sbjct: 752 LFMDMINQGK--IPLDVVDDMIRDH---------------CKEGNLDKALMLRDVIVAKS 794

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
                 +Y +++  LC  G + EAL L  EM
Sbjct: 795 APMGCSSYLAIVDNLCRKGKLSEALNLLKEM 825



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 148/357 (41%), Gaps = 63/357 (17%)

Query: 338 IINGL-VKLGRAVDGARVLMSMEERKF----HVNEYIYSTLISGLFKEGKAEDAMK---- 388
           + NGL +K+ RA     V+++   R      H +  +   L+    K G+ +DA +    
Sbjct: 13  LANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLM 72

Query: 389 ----------------------------LWKQ---MMEKGCKPNTVVYSALIDGLCRVGK 417
                                       LWK    M+  G  P+   YS LI+  C+V +
Sbjct: 73  MRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVRE 132

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            D A+++L EM   GC  N  TY+ L+ G   SG   +A    KDM     V +   Y  
Sbjct: 133 FDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA 192

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI+GLC+  +  EA+ +  +M     KP+VV Y+++I G    G+ +EA K+  EM+   
Sbjct: 193 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVA-- 250

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
              QP+  TY+ L+  LCK   +  +  LL  M+     PD +T N+ +           
Sbjct: 251 AGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG--------- 301

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                        F+       F+++  M    +SP   T+  ++  LC+    + A
Sbjct: 302 ------------HFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKA 346



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 140/333 (42%), Gaps = 59/333 (17%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D+  Y  LI + ++SG+ ++   VL  + +   V     +  +     K    E+A  + 
Sbjct: 501 DNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 560

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  +      +  +N++++ + + G    A   +N I+ AK   ++PN +T+  +I  
Sbjct: 561 DEMSKK-GVDPNIVCYNALIDGLCKSGDISYARNVFNSIL-AK--GLVPNCVTYTSLIDG 616

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C++G + NA  L+ EM      PD + Y  L  G      L++A+ L++EM + G   +
Sbjct: 617 SCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HAS 675

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL-------------- 307
             +FN L++G CK G++    KL+  +  +G +PN +T   +I GL              
Sbjct: 676 ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFV 735

Query: 308 ---------------------------------------CLKGNLDKAVSLLDRMVASKC 328
                                                  C +GNLDKA+ L D +VA   
Sbjct: 736 ELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSA 795

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
                +Y  I++ L + G+  +   +L  M++R
Sbjct: 796 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 828


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  244 bits (622), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 145/470 (30%), Positives = 239/470 (50%), Gaps = 37/470 (7%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ +  +V ++     P+ + FN ++  V ++   +  I L  +M       D+YTY  
Sbjct: 67  AVDLFGDMVKSRP---FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
            ++  C+ ++L  A+ +L +M   G  P  VT + L+NG C +  +  A  LVD M   G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+  T+ TLIHGL L     +AV+L+D+MV   C P+ VTYGT++NGL K G      
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  ME+ K   +  IY+T+I GL K    +DA+ L+ +M  KG +P+   YS+LI  L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+  +A  +L +MI      N  T+S+L+  F + GK  +A +++ +M K +   + 
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             YS LI+G C   +L EA+ ++  M+S+ C P+VV YS++I G C A  VEE ++LF E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423

Query: 533 M---------------------------------LCLEPKSQPDVFTYNILLNALCKQSN 559
           M                                   +     P++ TYNILL+ LCK   
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           ++ ++ +   +     +PD+ T NI +  +  K    +DG +    L+++
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC-KAGKVEDGWELFCNLSLK 532



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 147/465 (31%), Positives = 239/465 (51%), Gaps = 14/465 (3%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + + +S+LN          A+   + +V    M   P+T TF  +I  +        A+ 
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMV---EMGYKPDTFTFTTLIHGLFLHNKASEAVA 209

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L  +M  R C+PD+ TY T+++GLCK   +D A+ LL +M+        V +N +I+GLC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K   +  A  L   M  KG  P+  TY++LI  LC  G    A  LL  M+  K  PN V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           T+  +I+  VK G+ V+  ++   M +R    + + YS+LI+G     + ++A  +++ M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + K C PN V YS LI G C+  + +E  E+  EM   G   N  TY++L+ GFF++   
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A  ++K M       N + Y++L+ GLC++GKL +A +V+  +     +PD+  Y+ M
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I G+C AG VE+  +LF   L L+  S P+V  YN +++  C++ +   +  LL  M + 
Sbjct: 510 IEGMCKAGKVEDGWELFCN-LSLKGVS-PNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           G  P+  T N   T ++ +L   +DG     E +  L K  R+ G
Sbjct: 568 GPLPNSGTYN---TLIRARL---RDGD---REASAELIKEMRSCG 603



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 235/468 (50%), Gaps = 6/468 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y  +  + +A+ L   MV E   K    +F ++++ +    L+++A E    +   
Sbjct: 159 LLNGYCHSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLF---LHNKASEAVALVDQM 214

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P+ +T+  V+  +C+ G +D A+ L ++M     E D+  Y T++DGLCK   +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A+ L  EM   G  P   T++ LI+ LC  G    A++L+ +M  +   PN VT++ L
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I     +G L +A  L D M+     P+  TY ++ING     R  +   +   M  +  
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   YSTLI G  K  + E+ M+L+++M ++G   NTV Y+ LI G  +    D A+ 
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  +M++ G   N  TY+ L+ G  ++GK  KA+ +++ + ++    +   Y+++I G+C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK+ +   ++  +  +G  P+V+AY++MI G C  GS EEA  L  +M   E    P+
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM--KEDGPLPN 572

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
             TYN L+ A  +  +   S +L+  M   G   D  T  +    L +
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 620



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 207/429 (48%), Gaps = 18/429 (4%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           ++D+AV L  +M     FP+ V FN L++ + K  +      L + M   G   +  TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
             I+  C +  L  A+++L +M+     P+ VT  +++NG     R  D   ++  M E 
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            +  + + ++TLI GLF   KA +A+ L  QM+++GC+P+ V Y  +++GLC+ G  D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +L +M      A+   Y++++ G  +      A+ ++ +M       +   YS LI  
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC  G+  +A  + + M+ R   P+VV +S++I      G + EA KL++EM  ++    
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM--IKRSID 360

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PD+FTY+ L+N  C    +  +  +   M+ + C P++VT +  +     K +  ++G +
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC-KAKRVEEGME 419

Query: 602 FLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              E++ R                F+ +       + + M+   + P   T+  ++  LC
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479

Query: 647 RPKRIQAAI 655
           +  ++  A+
Sbjct: 480 KNGKLAKAM 488



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 30/248 (12%)

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSS------LMKGFFESGKGHKAVEIWKDMAKNNC 468
           +G P       F +  +GC   +F  +S      L     +  K   AV+++ DM K+  
Sbjct: 21  IGNPPTVPS-FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRP 79

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + V ++ L+  + +  K      +  QM + G   D+  YS  I+  C    +  AL 
Sbjct: 80  FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +  +M+ L    +PD+ T + LLN  C    IS ++ L++ M++ G  PD  T    +  
Sbjct: 140 VLAKMMKL--GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
           L                     F   + S    +V+ M+Q+   P   T+  VV  LC+ 
Sbjct: 198 L---------------------FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 649 KRIQAAIN 656
             I  A++
Sbjct: 237 GDIDLALS 244


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 156/508 (30%), Positives = 261/508 (51%), Gaps = 54/508 (10%)

Query: 127 AYGKAHLVEEAIRLFHTMVD--------EFHCK------RTVKSFNSVLNVIIQEGLYHR 172
           A+ + H + +A+ LFH  +D        E  C       R  + +++V++V      YH+
Sbjct: 14  AHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSV------YHK 67

Query: 173 ALE------------FYNHIVNAKH----MNILP---------NTLTFNLVIKTVCRLGL 207
            +                  VN  H     ++L          N    NLV+K  CR G 
Sbjct: 68  MVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQ 127

Query: 208 VDNAIQLFREMPVRNCE---PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPV 263
            D A+ LF +M  RN +   PD  TY TL++G CK  RL EA +L + M+  G C P  V
Sbjct: 128 CDKAMSLFSQMK-RNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLV 186

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T++VLI+  CK+GE+G    L++ M  +G   +   Y++LI   C +G+++    L D M
Sbjct: 187 TYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEM 246

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +  K  PN VTY  ++ GL + GR  + + +L  M  R    +   Y+ L  GL K G+A
Sbjct: 247 LRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRA 306

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            DA+K+   M++KG +P T+ Y+ +++GLC+  + D+A  ++  M+  G   +A TY++L
Sbjct: 307 GDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTL 366

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV--LIHGLCEDGKLREARMVWTQMLSR 501
           +KG   +GK H+A+++WK +           ++   LI GLC++G++ +A  + + M+  
Sbjct: 367 LKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEM 426

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G + ++V Y+ +I G   A  + EALKL+     +E    P+  TY++++N LCK   +S
Sbjct: 427 GLQGNIVTYNFLIEGYLAARKLIEALKLWK--YAVESGFSPNSMTYSVMINGLCKMQMLS 484

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +  L   M D G  P ++  N  +T+L
Sbjct: 485 VARGLFCKMKDSGIRPTVIDYNALMTSL 512



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 236/467 (50%), Gaps = 7/467 (1%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCK-RTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
            + K + ++   ++A+ LF  M   + C      ++N+++N   +      A   +  + 
Sbjct: 117 LVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAM- 175

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
             K  +  PN +T++++I   C+ G V   + L  EM     + D++ Y +L+   C E 
Sbjct: 176 -KKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEG 234

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            ++    L DEM      P  VT++ L+ GL + G    A++++ +M  +G  P+ V Y 
Sbjct: 235 DIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYT 294

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            L  GLC  G    A+ +LD MV     P  +TY  ++NGL K  R  D   V+  M ++
Sbjct: 295 VLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG--CKPNTVVYSALIDGLCRVGKPD 419
               +   Y+TL+ GL   GK  +AM LWK ++ +    KP+    + LI GLC+ G+  
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVH 414

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A  I   M+  G   N  TY+ L++G+  + K  +A+++WK   ++    N + YSV+I
Sbjct: 415 DAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMI 474

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +GLC+   L  AR ++ +M   G +P V+ Y++++  LC   S+E+A  LF EM  +   
Sbjct: 475 NGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNV--N 532

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
              DV ++NI+++   K  ++  + +LL+ M      PD VT +I +
Sbjct: 533 HNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILI 579



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 229/456 (50%), Gaps = 8/456 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   Y K+  V E + L   M  E   K  V  ++S+++    EG      E ++ 
Sbjct: 187 TYSVLIDCYCKSGEVGEGLGLLEEMERE-GLKADVFVYSSLISAFCGEGDIETGRELFDE 245

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++  K   + PN +T++ +++ + R G    A ++ ++M  R   PD+  Y  L DGLCK
Sbjct: 246 MLRRK---VSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCK 302

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R  +A+ +LD M   G  P  +T+NV++NGLCK   +  A  +V+ M  KG  P+ VT
Sbjct: 303 NGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVT 362

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASK--CMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           YNTL+ GLC  G + +A+ L   +++ K    P+  T   +I GL K GR  D AR+  S
Sbjct: 363 YNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSS 422

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M E     N   Y+ LI G     K  +A+KLWK  +E G  PN++ YS +I+GLC++  
Sbjct: 423 MVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQM 482

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
              A  +  +M ++G       Y++LM          +A  ++++M   N   + V +++
Sbjct: 483 LSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNI 542

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           +I G  + G ++ A+ + ++M      PD V +S +I+     G ++EA+ L+ +M+   
Sbjct: 543 IIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSC- 601

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
               P V  ++ LL     +      I LL+ M D+
Sbjct: 602 -GHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADK 636



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 251/516 (48%), Gaps = 15/516 (2%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVD 146
           +++ +  SG       +  +M+R    V+     +  +   + KA  + EA  LF  M  
Sbjct: 118 VLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKK 177

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
              C+  + +++ +++   + G     L     +   +   +  +   ++ +I   C  G
Sbjct: 178 GGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM---EREGLKADVFVYSSLISAFCGEG 234

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
            ++   +LF EM  R   P++ TY  LM GL +  R  EA  +L +M   G  P  V + 
Sbjct: 235 DIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYT 294

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           VL +GLCKNG  G A K++D M  KG  P  +TYN +++GLC +  +D A  +++ MV  
Sbjct: 295 VLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKK 354

Query: 327 KCMPNEVTYGTIINGLVKLGR---AVDGARVLMSMEERKFHVNEYIYS--TLISGLFKEG 381
              P+ VTY T++ GL   G+   A+D  ++L+S    KFHV   +++   LI GL KEG
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLS---EKFHVKPDVFTCNNLIQGLCKEG 411

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           +  DA ++   M+E G + N V Y+ LI+G     K  EA ++    + +G + N+ TYS
Sbjct: 412 RVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYS 471

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            ++ G  +      A  ++  M  +      + Y+ L+  LC +  L +AR ++ +M + 
Sbjct: 472 VMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNV 531

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
               DVV+++ +I G   AG V+ A +L +EM  ++    PD  T++IL+N   K   + 
Sbjct: 532 NHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMD--LVPDAVTFSILINRFSKLGMLD 589

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
            ++ L   M+  G  P +V  +  L     K E  +
Sbjct: 590 EAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEK 625



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 218/452 (48%), Gaps = 30/452 (6%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D  + ++ +M      P   +   L +     +    A  +L  M   G        N++
Sbjct: 59  DAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLV 118

Query: 269 INGLCKNGELGRAAKLVDNMF--LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV-A 325
           + G C++G+  +A  L   M       +P+ VTYNTL++G C    L +A  L + M   
Sbjct: 119 LKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKG 178

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
             C PN VTY  +I+   K G   +G  +L  ME      + ++YS+LIS    EG  E 
Sbjct: 179 GDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIET 238

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
             +L+ +M+ +   PN V YS L+ GL R G+  EA E+L +M   G   +   Y+ L  
Sbjct: 239 GRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLAD 298

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G  ++G+   A+++   M +       + Y+V+++GLC++ ++ +A  V   M+ +G KP
Sbjct: 299 GLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKP 358

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           D V Y++++ GLC AG + EA+ L+  +L  +   +PDVFT N L+  LCK+  +  +  
Sbjct: 359 DAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAAR 418

Query: 566 LLNSMMDRGCDPDLVTCNIFLT---ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           + +SM++ G   ++VT N  +    A ++ +E            A++L+K    SG    
Sbjct: 419 IHSSMVEMGLQGNIVTYNFLIEGYLAARKLIE------------ALKLWKYAVESG---- 462

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    SP + T+  ++  LC+ + +  A
Sbjct: 463 --------FSPNSMTYSVMINGLCKMQMLSVA 486



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 179/399 (44%), Gaps = 61/399 (15%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+E   +TLI  L      D  VS+  +MV++  +P   +   +    V          V
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM--------------------- 393
           L  M +R F VN Y  + ++ G  + G+ + AM L+ QM                     
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 394 ---------------MEKG--CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
                          M+KG  C+PN V YS LID  C+ G+  E   +L EM   G  A+
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            F YSSL+  F   G      E++ +M +     N V YS L+ GL   G+ REA  +  
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M +RG +PDVVAY+ +  GLC  G   +A+K+ + M  ++   +P   TYN+++N LCK
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLM--VQKGEEPGTLTYNVVVNGLCK 337

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
           +  +  +  ++  M+ +G  PD VT N  L  L         G   ++E A+ L+K    
Sbjct: 338 EDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLC--------GAGKIHE-AMDLWKL--- 385

Query: 617 SGGFKIVEVMLQKF-LSPQTSTWERVVQELCRPKRIQAA 654
                   ++ +KF + P   T   ++Q LC+  R+  A
Sbjct: 386 --------LLSEKFHVKPDVFTCNNLIQGLCKEGRVHDA 416



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 204/456 (44%), Gaps = 15/456 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI  +   GD ++   +   M R K      ++  + +  G+     EA  +   M
Sbjct: 222 VYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDM 281

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                 +  V ++  + + + + G    A++  + +V        P TLT+N+V+  +C+
Sbjct: 282 TAR-GVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEE---PGTLTYNVVVNGLCK 337

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA-----VLLLDEMQVDGCF 259
              +D+A  +   M  +  +PD  TY TL+ GLC   ++ EA     +LL ++  V    
Sbjct: 338 EDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVK--- 394

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   T N LI GLCK G +  AA++  +M   G   N VTYN LI G      L +A+ L
Sbjct: 395 PDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKL 454

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
               V S   PN +TY  +INGL K+        +   M++         Y+ L++ L +
Sbjct: 455 WKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCR 514

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           E   E A  L+++M       + V ++ +IDG  + G    A+E+L EM       +A T
Sbjct: 515 EDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVT 574

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           +S L+  F + G   +A+ +++ M     V   V +  L+ G    G+  +   +  QM 
Sbjct: 575 FSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMA 634

Query: 500 SRGCKPDVVAYSSMIHGLCNAG---SVEEALKLFNE 532
            +    D    S+++  LC+      VE+ L  F++
Sbjct: 635 DKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQ 670



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 121/248 (48%), Gaps = 4/248 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++ F+ + Y  A  + EA++L+   V+      ++ +++ ++N + +  +   A   +  
Sbjct: 434 TYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSM-TYSVMINGLCKMQMLSVARGLF-- 490

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
               K   I P  + +N ++ ++CR   ++ A  LF+EM   N   D+ ++  ++DG  K
Sbjct: 491 -CKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLK 549

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              +  A  LL EM +    P  VTF++LIN   K G L  A  L + M   G +P  V 
Sbjct: 550 AGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVV 609

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +++L+ G  LKG  +K +SLL +M     + +     TI+  L  + R +D  ++L    
Sbjct: 610 FDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFS 669

Query: 360 ERKFHVNE 367
           ++  H ++
Sbjct: 670 QQSEHTSK 677


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 138/397 (34%), Positives = 210/397 (52%), Gaps = 7/397 (1%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  ++N+++K +C  G V +A QLF EM      PD+ TY  L+ G C    L+ AV LL
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMA---SAPDVVTYGILIHGHCALGELENAVKLL 314

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM   G  P    +  ++  LC  G +  A ++V++M  +  + +E  Y T++ G C K
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G+L  A    D M       + VTY T+INGL +     +  ++L  M  R+  V+E  Y
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI G  K GK  +A ++   M+++G  PN V Y+AL DGLC+ G    A E+L EM N
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV-CYSVLIHGLCEDGKLR 489
            G   NA TY+SL+ G  ++G   +A+    DM    C+  +V  Y+ LI  LC+ G L 
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADM-DTACLKPDVYTYTTLIDALCKSGDLD 553

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  +  +ML +G KP +V Y+ +++G C +G VE   KL + M  LE    P+  TYN 
Sbjct: 554 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWM--LEKNIHPNAATYNS 611

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L+   C ++N+  + ++   M  R   P+  T NI +
Sbjct: 612 LMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILI 648



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 212/406 (52%), Gaps = 34/406 (8%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           LDEA+ L  E+          ++N+L+  LC  G +  A +L D M      P+ VTY  
Sbjct: 244 LDEAIELFQELPHKNV----CSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGI 296

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LIHG C  G L+ AV LLD MVA    PN   Y +++  L   G   D  RV+  M +RK
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
             ++E +Y+T++SG   +G    A + + +M  KG   + V Y+ +I+GLCR  + +EAE
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAE 416

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           ++L EM       +  TY+ L+ G+ + GK  +A ++   M +     N V Y+ L  GL
Sbjct: 417 KLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGL 476

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCLEPKS 540
           C+ G ++ A  +  +M ++G + +   Y+S+I+GLC AG +E+A++   +M   CL    
Sbjct: 477 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACL---- 532

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           +PDV+TY  L++ALCK  ++  +  LL  M+D+G  P +VT N+ +              
Sbjct: 533 KPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNG------------ 580

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                         R  GG K+++ ML+K + P  +T+  ++++ C
Sbjct: 581 ---------FCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYC 617



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 233/484 (48%), Gaps = 9/484 (1%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           L++   ++G  K    +   M     VV     I    A G+   +E A++L   MV   
Sbjct: 265 LLKALCDAGRVKDARQLFDEMASAPDVVTYGILIHGHCALGE---LENAVKLLDEMV-AG 320

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
             +     + SV+ ++  +G    AL     +V  K   ++ +   +  V+   C  G +
Sbjct: 321 GVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK---VILDEALYTTVLSGFCNKGDL 377

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
            +A + F EM  +    D  TY T+++GLC+   L+EA  LL EM         VT+ VL
Sbjct: 378 VSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVL 437

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+G CK G++  A ++ + M  +G  PN VTY  L  GLC +G++  A  LL  M     
Sbjct: 438 IDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGL 497

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             N  TY ++INGL K G      R +  M+      + Y Y+TLI  L K G  + A  
Sbjct: 498 ELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHS 557

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L ++M++KG KP  V Y+ L++G C  G+ +  +++L  M+      NA TY+SLMK + 
Sbjct: 558 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYC 617

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
                    EI+K M   +   NE  Y++LI G C+   ++EA     +M+ +G +    
Sbjct: 618 IENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTAT 677

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +YS++I  L       EA +LF++M      ++ DV+ + I LN    + N+  ++ L +
Sbjct: 678 SYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYIDLN--FNEDNLESTLALCD 735

Query: 569 SMMD 572
            +++
Sbjct: 736 ELVE 739



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 168/366 (45%), Gaps = 16/366 (4%)

Query: 81  LGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           L ++ + +++  + N GD  S       M+R+       ++  +     +A  +EEA +L
Sbjct: 359 LDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKL 418

Query: 141 FHTM------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
              M      VDE        ++  +++   + G    A + +N +V      + PN +T
Sbjct: 419 LQEMWARRLDVDEV-------TYTVLIDGYCKRGKMAEAFQMHNAMVQ---RGVTPNVVT 468

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +  +   +C+ G V  A +L  EM  +  E +  TY +L++GLCK   L++A+  + +M 
Sbjct: 469 YTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMD 528

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
                P   T+  LI+ LCK+G+L RA  L+  M  KG  P  VTYN L++G C+ G ++
Sbjct: 529 TACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVE 588

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
               LLD M+     PN  TY +++              +   M  R    NE  Y+ LI
Sbjct: 589 GGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILI 648

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G  K    ++A+    +M++KG +     YSALI  L +  K  EA E+  +M   G  
Sbjct: 649 KGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLT 708

Query: 435 ANAFTY 440
           A +  Y
Sbjct: 709 AESDVY 714



 Score = 95.5 bits (236), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 122/271 (45%), Gaps = 30/271 (11%)

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A++L++++  K    N   Y+ L+  LC  G+  +A ++  EM +   A +  TY  L
Sbjct: 245 DEAIELFQELPHK----NVCSYNILLKALCDAGRVKDARQLFDEMAS---APDVVTYGIL 297

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G    G+   AV++  +M       N   Y+ ++  LC+ G + +A  V   M+ R  
Sbjct: 298 IHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKV 357

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             D   Y++++ G CN G +  A + F+EM         D  TY  ++N LC+   +  +
Sbjct: 358 ILDEALYTTVLSGFCNKGDLVSARRWFDEMQ--RKGLATDGVTYTTMINGLCRAVELEEA 415

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
             LL  M  R  D D VT  + +           DG            KR + +  F++ 
Sbjct: 416 EKLLQEMWARRLDVDEVTYTVLI-----------DG----------YCKRGKMAEAFQMH 454

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M+Q+ ++P   T+  +   LC+   +QAA
Sbjct: 455 NAMVQRGVTPNVVTYTALTDGLCKQGDVQAA 485


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 230/415 (55%), Gaps = 6/415 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V ++N+VL + + +     A  F++ +++     + PN  T+N++I+ +C  G    A+
Sbjct: 115 SVLAYNAVL-LALSDASLTSARRFFDSMLSD---GVAPNVYTYNILIRALCGRGHRKEAL 170

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            + R+M    C P++ TY TL+    +   +D A  L+  M   G  P  VTFN ++NG+
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G++  A K+ D M  +G  P+ V+YNTL+ G C  G   +A+S+   M     MP+ 
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VT+ ++I+ + K G       ++  M ER   +NE  ++ LI G  K+G  +DA+   + 
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M +   KP+ V Y+ALI+G C VG+ DEA E+L EM   G   +  TYS+++  + ++  
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 410

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            H A E+ + M +   + + + YS LI  LCE+ +L +A +++  M+  G +PD   Y+S
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           +I G C  G+VE AL L ++M  ++    PDV TY++L+N L K +    +  LL
Sbjct: 471 LIDGHCKEGNVERALSLHDKM--VKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 209/407 (51%), Gaps = 3/407 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P+ L +N V+  +    L  +A + F  M      P++YTY  L+  LC      EA+ 
Sbjct: 113 VPSVLAYNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALS 171

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L +M+  GC P  VT+N L+    + GE+  A +LV  M   G  PN VT+N++++G+C
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC 231

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G ++ A  + D M+     P+ V+Y T++ G  K G + +   V   M ++    +  
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            +++LI  + K G  E A+ L +QM E+G + N V ++ALIDG C+ G  D+A   +  M
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
                  +   Y++L+ G+   G+  +A E+  +M       + V YS +I   C++   
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  QML +G  PD + YSS+I  LC    + +A  LF  M+ L    QPD FTY 
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKL--GLQPDEFTYT 469

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
            L++  CK+ N+  ++ L + M+  G  PD+VT ++ +  L +   A
Sbjct: 470 SLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 516



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 147/501 (29%), Positives = 235/501 (46%), Gaps = 25/501 (4%)

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           I I    G+ H  +EA+ +   M     C   V ++N+++    + G    A      ++
Sbjct: 155 ILIRALCGRGHR-KEALSILRDMRGA-GCGPNVVTYNTLVAAFFRAGEVDGAERLVGMML 212

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           +     + PN +TFN ++  +C+ G +++A ++F EM      PD  +Y TL+ G CK  
Sbjct: 213 DG---GLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAG 269

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
              EA+ +  EM   G  P  VTF  LI+ +CK G L  A  LV  M  +G   NEVT+ 
Sbjct: 270 CSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFT 329

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI G C KG LD A+  +  M   +  P+ V Y  +ING   +GR  +   +L  ME +
Sbjct: 330 ALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAK 389

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               +   YST+IS   K      A +L +QM+EKG  P+ + YS+LI  LC   +  +A
Sbjct: 390 GLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDA 449

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +   MI  G   + FTY+SL+ G  + G   +A+ +   M K   + + V YSVLI+G
Sbjct: 450 HVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLING 509

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH---------------GLCNAGSVEEA 526
           L +  +  EA+ +  ++      P    Y +++H               G C  G + EA
Sbjct: 510 LSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEA 569

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            K++  ML  +     D   Y++L++  C+  N+  ++     M+ RG  P+  +    +
Sbjct: 570 DKVYQSML--DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLI 627

Query: 587 TALKEK---LEAPQDGTDFLN 604
             L E    +EA Q     LN
Sbjct: 628 RGLFENGMVVEADQVIQQLLN 648



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 145/510 (28%), Positives = 248/510 (48%), Gaps = 25/510 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  +  +G+    E ++  M          +F  +     KA  +E+A ++F  M
Sbjct: 187 TYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 246

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E      V S+N+++    + G  H AL  +  +       I+P+ +TF  +I  +C+
Sbjct: 247 MREGLAPDGV-SYNTLVGGYCKAGCSHEALSVFAEMTQK---GIMPDVVTFTSLIHVMCK 302

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A+ L R+M  R  + +  T+  L+DG CK+  LD+A+L +  M+     P+ V 
Sbjct: 303 AGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVC 362

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LING C  G +  A +L+  M  KG  P+ VTY+T+I   C   +   A  L  +M+
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 422

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+ +TY ++I  L +  R  D   +  +M +     +E+ Y++LI G  KEG  E
Sbjct: 423 EKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 482

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+ L  +M++ G  P+ V YS LI+GL +  +  EA+++LF++ +         Y +LM
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM 542

Query: 445 ---------------KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                          KGF   G  ++A ++++ M   N   +   YSVLIHG C  G + 
Sbjct: 543 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 602

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKSQPDVFTY 547
           +A     QML RG  P+  +  S+I GL   G V EA ++  ++L  C    S  D    
Sbjct: 603 KALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCC----SLADAEAS 658

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDP 577
             L++    + N+   +D+L+ M   G  P
Sbjct: 659 KALIDLNLNEGNVDAVLDVLHGMAKDGLLP 688



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 223/441 (50%), Gaps = 7/441 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +  A R F +M+ +      V ++N ++  +   G    AL     +  A      PN +
Sbjct: 131 LTSARRFFDSMLSD-GVAPNVYTYNILIRALCGRGHRKEALSILRDMRGA---GCGPNVV 186

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N ++    R G VD A +L   M     +P++ T+ ++++G+CK  ++++A  + DEM
Sbjct: 187 TYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 246

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  V++N L+ G CK G    A  +   M  KG +P+ VT+ +LIH +C  GNL
Sbjct: 247 MREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 306

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           + AV+L+ +M       NEVT+  +I+G  K G   D    +  M + +   +   Y+ L
Sbjct: 307 EWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNAL 366

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G    G+ ++A +L  +M  KG KP+ V YS +I   C+      A E+  +M+  G 
Sbjct: 367 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 426

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +A TYSSL++   E  +   A  ++K+M K     +E  Y+ LI G C++G +  A  
Sbjct: 427 LPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALS 486

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  +M+  G  PDVV YS +I+GL  +    EA +L  ++   EP   P    Y+ L++ 
Sbjct: 487 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPI--PANTKYDALMHC 544

Query: 554 LCKQSNISHSIDLLNSMMDRG 574
            C+++ +   + LL     +G
Sbjct: 545 -CRKAELKSVLALLKGFCMKG 564



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 222/448 (49%), Gaps = 34/448 (7%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A++L    P R  +  I +Y +L       NR   A   L   +  G  P+ + +N ++ 
Sbjct: 71  ALRLLPSSPPRPFDSLIKSYASL------PNRASLAAAALAFARSAGYVPSVLAYNAVLL 124

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            L  +  L  A +  D+M   G  PN  TYN LI  LC +G+  +A+S+L  M  + C P
Sbjct: 125 AL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGP 183

Query: 331 NEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           N VTY T++    + G  VDGA R++  M +     N   ++++++G+ K GK EDA K+
Sbjct: 184 NVVTYNTLVAAFFRAGE-VDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKV 242

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + +MM +G  P+ V Y+ L+ G C+ G   EA  +  EM   G   +  T++SL+    +
Sbjct: 243 FDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCK 302

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           +G    AV + + M +     NEV ++ LI G C+ G L +A +    M     KP VV 
Sbjct: 303 AGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVC 362

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLN 568
           Y+++I+G C  G ++EA +L +EM   E K  +PDV TY+ +++A CK  +   + +L  
Sbjct: 363 YNALINGYCMVGRMDEARELLHEM---EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQ 419

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
            M+++G  PD +T +  +  L E+                     +R S    + + M++
Sbjct: 420 QMLEKGVLPDAITYSSLIRVLCEE---------------------KRLSDAHVLFKNMIK 458

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAAIN 656
             L P   T+  ++   C+   ++ A++
Sbjct: 459 LGLQPDEFTYTSLIDGHCKEGNVERALS 486



 Score = 44.3 bits (103), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 61/134 (45%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           ++K  C  GL++ A ++++ M  RN   D   Y  L+ G C+   + +A+    +M   G
Sbjct: 556 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P   +   LI GL +NG +  A +++  +     L +      LI     +GN+D  +
Sbjct: 616 FAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVL 675

Query: 318 SLLDRMVASKCMPN 331
            +L  M     +P+
Sbjct: 676 DVLHGMAKDGLLPS 689


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 166/516 (32%), Positives = 255/516 (49%), Gaps = 27/516 (5%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           LF  M D+  C   V +FN ++N +  EG   +A    N +   +    +P  +T+N ++
Sbjct: 220 LFREMSDKGICP-NVGTFNILINGLCVEGNLKKA---GNLLKQMEENGFVPTIVTYNTLL 275

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
              C+ G    AI+L   M  +  E D+ TY   +D LC  +R  +A LLL +M+ +   
Sbjct: 276 NWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 335

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+N LING  K G++G AA++ + M      PN VTYN LI G C  G+ ++A+ L
Sbjct: 336 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 395

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           LD M A+    NEVTYGT++NGL K  +     R+L  M      V    Y+ LI GL K
Sbjct: 396 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCK 455

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G  ++A++L   M + G  P+ + YS+LI+G CRVG    A+EI+  M  +G   N   
Sbjct: 456 NGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKII 515

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YS+L+  F + G   +A++++  M  N    +    +VL+  LC DGKL EA      M 
Sbjct: 516 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 575

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G  P+ + Y  +I+G  + G    A   F++M  ++    P  FTY  LL  LCK  N
Sbjct: 576 RIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM--IKCGQHPSFFTYGSLLKGLCKGGN 633

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +  +   LN +      P  V   ++ T L E  ++       L+E A+ LF +      
Sbjct: 634 LVEAKKFLNRLH---YIPGAVDSVMYNTLLAETCKSGN-----LHE-AVALFDK------ 678

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                 M+Q  + P + T+  ++  LCR  +   A+
Sbjct: 679 ------MVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 708



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 225/441 (51%), Gaps = 11/441 (2%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM-NILPNTLTFNLVIKTVCRLGLVDN 210
           R   S  S+L  + Q G+  +++  +  +++   + N +P+   F+L+I+   + G++D 
Sbjct: 126 RMYDSAKSILRHLCQMGIGSKSI--FGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDY 181

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A++ F  + +   +P +YT   ++  + K+ R +    L  EM   G  P   TFN+LIN
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 241

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLC  G L +A  L+  M   G +P  VTYNTL++  C KG    A+ L+D M+      
Sbjct: 242 GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEA 301

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           +  TY   I+ L    R+     +L  M +     NE  Y+TLI+G  KEGK   A +++
Sbjct: 302 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF 361

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            +M +    PN V Y+ALI G C VG  +EA  +L  M   G   N  TY +L+ G  + 
Sbjct: 362 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 421

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            K   A  + + M  N+ V   + Y+VLI GLC++G L EA  +   M   G  PDV+ Y
Sbjct: 422 EKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITY 481

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLN 568
           SS+I+G C  G+++ A     E++C   +S    +   Y+ L+   C+  N++ ++ +  
Sbjct: 482 SSLINGFCRVGNIKSA----KEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYA 537

Query: 569 SMMDRGCDPDLVTCNIFLTAL 589
            M   G   D  TCN+ +++L
Sbjct: 538 VMNCNGHGADHFTCNVLVSSL 558



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 239/490 (48%), Gaps = 7/490 (1%)

Query: 104 MVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
           ++L +MR+E     E ++  +   + K   +  A ++F+ M  +F       ++N+++  
Sbjct: 324 LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEM-SKFDLSPNCVTYNALIGG 382

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
               G +  AL   +H+  A    +  N +T+  ++  +C+    + A +L   M V + 
Sbjct: 383 HCHVGDFEEALRLLDHMEAA---GLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM 439

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
                 Y  L+DGLCK   LDEAV L+  M  DG  P  +T++ LING C+ G +  A +
Sbjct: 440 VVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 499

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           ++  M+  G + N++ Y+TLI+  C  GN+ +A+ +   M  +    +  T   +++ L 
Sbjct: 500 IICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLC 559

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           + G+  +  + L  M       N   Y  +I+G    G   +A   +  M++ G  P+  
Sbjct: 560 RDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFF 619

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y +L+ GLC+ G   EA++ L  +     A ++  Y++L+    +SG  H+AV ++  M
Sbjct: 620 TYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM 679

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK-PDVVAYSSMIHGLCNAGS 522
            +NN + +   YS L+ GLC  GK   A  ++   + RG   P+ V Y+ ++ GL  AG 
Sbjct: 680 VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 739

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
            + A   F EM  ++  + PD   +N ++++  ++  +  + D  ++M   G  P+L T 
Sbjct: 740 PKAAFYFFEEM--MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATY 797

Query: 583 NIFLTALKEK 592
           NI L    +K
Sbjct: 798 NILLHGFSKK 807



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 148/576 (25%), Positives = 263/576 (45%), Gaps = 28/576 (4%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           +L + T+ +L+        F+  + +L RMR    VV   ++  +     K  +++EA++
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           L   M  +      V +++S++N   + G    A E    I       ++ N + ++ +I
Sbjct: 465 LVGNMYKD-GVNPDVITYSSLINGFCRVGNIKSAKEI---ICRMYRSGLVLNKIIYSTLI 520

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
              C+ G V  A++++  M       D +T   L+  LC++ +L EA   L  M   G  
Sbjct: 521 YNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLV 580

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  +T++ +ING    G+   A    D+M   G  P+  TY +L+ GLC  GNL +A   
Sbjct: 581 PNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKF 640

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L+R+       + V Y T++    K G   +   +   M +     + Y YS+L++GL +
Sbjct: 641 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 700

Query: 380 EGKAEDAMKLWKQMMEKGCK-PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           +GKA  A+ L+   M +G   PN V+Y+ L+DGL + G P  A     EM+  G   +  
Sbjct: 701 KGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTV 760

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            +++++      G+  KA + +  M       N   Y++L+HG  +   L     +++ M
Sbjct: 761 AFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTM 820

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +  G  PD + + S+I GL  +G  +  +KL  +M+     +  D FT+NIL+N   +  
Sbjct: 821 MREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIM--EGTLADQFTFNILINKYSESG 878

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            +  + DL+N M   G  PD  T N     L +K  A ++ T  L+E             
Sbjct: 879 KMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK-SAFRESTVVLHE------------- 924

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  ML+  + P+ + +  ++  +CR   IQ A
Sbjct: 925 -------MLENGVIPKHAQYITLINGMCRVGDIQGA 953



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 201/435 (46%), Gaps = 8/435 (1%)

Query: 157  FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
            +N++L    + G  H A+  ++ +V     N+LP++ T++ ++  +CR G    A+ LF 
Sbjct: 656  YNTLLAETCKSGNLHEAVALFDKMVQN---NVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 712

Query: 217  EMPVRNCE-PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                R    P+   Y  L+DGL K      A    +EM   G  P  V FN +I+   + 
Sbjct: 713  TAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRR 772

Query: 276  GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            G++ +A      M   G  PN  TYN L+HG   K  L + +SL   M+     P+++T+
Sbjct: 773  GQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTF 832

Query: 336  GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             ++I GL K G    G ++L  M       +++ ++ LI+   + GK   A  L   M  
Sbjct: 833  HSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNT 892

Query: 396  KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
             G  P+   Y+ + +GL +     E+  +L EM+ NG       Y +L+ G    G    
Sbjct: 893  LGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 952

Query: 456  AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
            A ++  +M       +EV  S ++ GL   GK  +A +V   ML     P +  +++++H
Sbjct: 953  AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 1012

Query: 516  GLCNAGSVEEALKLFNEM-LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
              C    + EALKL   M LC     + DV  YN+L+  +C   + + + +L   M  R 
Sbjct: 1013 RFCRDAKIAEALKLKGVMELC---GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1069

Query: 575  CDPDLVTCNIFLTAL 589
              P++ T  + + A+
Sbjct: 1070 LCPNITTYAVLVDAI 1084



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 163/344 (47%)

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            P+T+ FN +I +  R G +  A   F  M      P++ TY  L+ G  K+  L   + L
Sbjct: 757  PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 816

Query: 250  LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
               M  +G FP  +TF+ LI GL K+G      KL+  M ++G L ++ T+N LI+    
Sbjct: 817  YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 876

Query: 310  KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             G + KA  L++ M      P+  TY  I NGL K     +   VL  M E         
Sbjct: 877  SGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQ 936

Query: 370  YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            Y TLI+G+ + G  + A KL  +M   G   + V  SA++ GL   GK ++A  +L  M+
Sbjct: 937  YITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHML 996

Query: 430  NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                     T+++LM  F    K  +A+++   M       + V Y+VLI G+C +G   
Sbjct: 997  RMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSA 1056

Query: 490  EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             A  ++ +M  R   P++  Y+ ++  +  A ++ +  KL  ++
Sbjct: 1057 AAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDL 1100



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 175/373 (46%), Gaps = 4/373 (1%)

Query: 130  KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
            KA   + A   F  M+ +  C  TV +FN++++   + G   +A +F++ +   +   + 
Sbjct: 736  KAGHPKAAFYFFEEMMKKGTCPDTV-AFNAIIDSCSRRGQMMKANDFFSTM---RWWGVC 791

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            PN  T+N+++    +   +   + L+  M      PD  T+ +L+ GL K    D  V L
Sbjct: 792  PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 851

Query: 250  LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            L +M ++G      TFN+LIN   ++G++ +A  LV+ M   G  P+  TYN + +GL  
Sbjct: 852  LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 911

Query: 310  KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            K    ++  +L  M+ +  +P    Y T+ING+ ++G      ++   ME   F  +E  
Sbjct: 912  KSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVA 971

Query: 370  YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
             S ++ GL   GK EDAM +   M+     P    ++ L+   CR  K  EA ++   M 
Sbjct: 972  ESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 1031

Query: 430  NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
              G   +   Y+ L+ G   +G    A E++++M   +   N   Y+VL+  +     L 
Sbjct: 1032 LCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLI 1091

Query: 490  EARMVWTQMLSRG 502
            +   + T +  RG
Sbjct: 1092 QGEKLLTDLQERG 1104


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 226/425 (53%), Gaps = 7/425 (1%)

Query: 162 NVIIQEGLYHRALEFYNHIVNAKHMNIL-----PNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +VI+   L      F N    ++ M IL     P+   +N VI   C++  ++ A Q+  
Sbjct: 112 DVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLN 171

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M  R   PDI TY  ++  LC   +L  A+ +LD++ +D C PT +T+ +LI      G
Sbjct: 172 RMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEG 231

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            +  A KL++ M  +G LP+  TYN +I G+C +G +++A  L+  + +  C P+ ++Y 
Sbjct: 232 GINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYN 291

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++   +  G+  +G +++  M  R    N+  YS LIS L + G+ ++A+ + K M+EK
Sbjct: 292 ILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 351

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
              P+T  Y  LI  LC+ G+ D A  I+  MI+NGC  +   Y++++    ++G  ++A
Sbjct: 352 ELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQA 411

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           +EI+  +    C  N   Y+ +I  L   G    A  +   M+S+G  PD + Y+S+I  
Sbjct: 412 LEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISC 471

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC  G VEEA+ L ++M   +   +P V +YNI+L  LCK   I  +I +   M+++GC 
Sbjct: 472 LCRDGLVEEAIGLLDDM--EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCR 529

Query: 577 PDLVT 581
           P+  T
Sbjct: 530 PNETT 534



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 224/430 (52%), Gaps = 6/430 (1%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +LN   + G ++ +L F   +VN  +    P+ +    +IK       ++ A ++  E+ 
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYT---PDVILCTKLIKGFFNFKNIEKASRVM-EIL 139

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
             + EPD++ Y  ++ G CK N+++ A  +L+ M+  G  P  VT+N++I  LC   +LG
Sbjct: 140 ESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 199

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  ++D + L  C+P  +TY  LI    ++G +++A+ LL+ M+A   +P+  TY  II
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 259

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            G+ K G     A ++ S+  +    +   Y+ L+     +GK ++  KL  +M  +GC+
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN V YS LI  LCR G+ DEA  +L  MI      + ++Y  L+    + G+   A+ I
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
              M  N C+ + V Y+ ++  LC++G   +A  ++ ++   GC P+V +Y++MI  L +
Sbjct: 380 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 439

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G    AL +   M+       PD  TYN L++ LC+   +  +I LL+ M   G  P +
Sbjct: 440 CGDRSRALGMVPAMI--SKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 497

Query: 580 VTCNIFLTAL 589
           ++ NI L  L
Sbjct: 498 ISYNIVLLGL 507



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 142/534 (26%), Positives = 256/534 (47%), Gaps = 67/534 (12%)

Query: 63  QPFSDEIFNS--TPKLG-----------SYQLGDSTFYSLIQHYANSGDFKS----LEMV 105
            P  ++ +NS  +PK+G           SY   ++    L+     +G F      LE +
Sbjct: 45  NPNPNDGYNSRNSPKVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECL 104

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII 165
           + +      ++  K    + K +     +E+A R+   +  E H +  V ++N+V++   
Sbjct: 105 VNKGYTPDVILCTK----LIKGFFNFKNIEKASRVMEIL--ESHTEPDVFAYNAVISGFC 158

Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC---RLGLVDNAIQLFREMPVRN 222
           +      A +  N +   K    LP+ +T+N++I ++C   +LGL   A+ +  ++ + N
Sbjct: 159 KVNQIEAATQVLNRM---KARGFLPDIVTYNIMIGSLCNRRKLGL---ALTVLDQLLLDN 212

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
           C P + TY  L++    E  ++EA+ LL+EM   G  P   T+N +I G+CK G + RAA
Sbjct: 213 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAA 272

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +L+ ++  KGC P+ ++YN L+     +G  D+   L+  M +  C PN+VTY  +I+ L
Sbjct: 273 ELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 332

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            + GR  +   VL  M E++   + Y Y  LIS L KEG+ + A+ +   M+  GC P+ 
Sbjct: 333 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 392

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V Y+ ++  LC+ G  ++A EI  ++   GC  N  +Y++++   +  G   +A+ +   
Sbjct: 393 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 452

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREA------------------------------R 492
           M       +E+ Y+ LI  LC DG + EA                              R
Sbjct: 453 MISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 512

Query: 493 M-----VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           +     ++ +M+ +GC+P+   Y  +I G+  AG   EA++L N +   +  SQ
Sbjct: 513 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQ 566



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 193/373 (51%), Gaps = 10/373 (2%)

Query: 143 TMVDEF---HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           T++D+    +C  TV ++  ++   I EG  + A++    ++      +LP+  T+N +I
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEML---ARGLLPDMYTYNAII 259

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           + +C+ G+V+ A +L   +  + CEPD+ +Y  L+     + + DE   L+ EM   GC 
Sbjct: 260 RGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 319

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+++LI+ LC+ G +  A  ++  M  K   P+  +Y+ LI  LC +G LD A+ +
Sbjct: 320 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 379

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           +D M+++ C+P+ V Y TI+  L K G A     +   +       N   Y+T+IS L+ 
Sbjct: 380 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 439

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G    A+ +   M+ KG  P+ + Y++LI  LCR G  +EA  +L +M  +G      +
Sbjct: 440 CGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVIS 499

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ ++ G  +  +   A+ ++ +M +  C  NE  Y +LI G+   G   EA  +   + 
Sbjct: 500 YNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLF 559

Query: 500 SRGCKPDVVAYSS 512
           SR    DV++  S
Sbjct: 560 SR----DVISQDS 568



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 194/402 (48%), Gaps = 17/402 (4%)

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L+N  CK G+   +   ++ +  KG  P+ +    LI G     N++KA  +++ ++ S 
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESH 142

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+   Y  +I+G  K+ +     +VL  M+ R F  +   Y+ +I  L    K   A+
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            +  Q++   C P  + Y+ LI+     G  +EA ++L EM+  G   + +TY+++++G 
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + G   +A E+   +    C  + + Y++L+      GK  E   +  +M SRGC+P+ 
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 322

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V YS +I  LC  G ++EA+ +   M+  E +  PD ++Y+ L++ALCK+  +  +I ++
Sbjct: 323 VTYSILISSLCRFGRIDEAISVLKVMI--EKELTPDTYSYDPLISALCKEGRLDLAIGIM 380

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF--------------LNELAIRLFKR 613
           + M+  GC PD+V  N  L AL +   A Q    F               N +   L+  
Sbjct: 381 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 440

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              S    +V  M+ K + P   T+  ++  LCR   ++ AI
Sbjct: 441 GDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAI 482



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 160/326 (49%), Gaps = 24/326 (7%)

Query: 350 DGARVLMSMEERKFHVNEYIYS-----TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           +  +V +S E R  H+  Y +       L++   K GK  +++   + ++ KG  P+ ++
Sbjct: 56  NSPKVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVIL 115

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
            + LI G       ++A  ++ E++ +    + F Y++++ GF +  +   A ++   M 
Sbjct: 116 CTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMK 174

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
               + + V Y+++I  LC   KL  A  V  Q+L   C P V+ Y+ +I      G + 
Sbjct: 175 ARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGIN 234

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA+KL  EML       PD++TYN ++  +CK+  +  + +L+ S+  +GC+PD+++ NI
Sbjct: 235 EAMKLLEEMLAR--GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNI 292

Query: 585 FLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQK 629
            L A   + +   +G   + E+  R               L +  R      +++VM++K
Sbjct: 293 LLRAFLNQGKW-DEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 351

Query: 630 FLSPQTSTWERVVQELCRPKRIQAAI 655
            L+P T +++ ++  LC+  R+  AI
Sbjct: 352 ELTPDTYSYDPLISALCKEGRLDLAI 377


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 160/543 (29%), Positives = 277/543 (51%), Gaps = 51/543 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+ LFH MVD  H   ++  F  +L  I +   Y  A++ Y  +   ++  ++P T+
Sbjct: 35  IDDAVALFHRMVD-MHPLPSIVEFTKILGTIAKMRYYATAIDLYTLM---EYKGVVPFTV 90

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN++I   C +G +D A  +  ++    C P++ T+ TLM G C  +++ +A+ + DEM
Sbjct: 91  TFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEM 150

Query: 254 QVDGCFPTPVTFNVLINGLCKN--GELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLCLK 310
                    V +  LINGLCK+  G+   A +L+  M  +  + PN + YNT++HGLC  
Sbjct: 151 VARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKD 210

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR---------------AVDGARVL 355
           GN+++A  L  +M+     P+  TY ++I GL + G+                VD AR L
Sbjct: 211 GNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEAREL 270

Query: 356 MS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
            + M ER    +   Y+ L++G     K  +A KL+  M+E+G +P+T+ Y+ L+ G C 
Sbjct: 271 FNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCL 330

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           + K DEA  +   MI  G   + ++Y+ L+KG+ +  +  +A+ + +DM   N V N + 
Sbjct: 331 IDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIIT 390

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCK--PDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           Y+ ++ GLC+ G + +A  +  +M    C+  PDV  Y+ ++  LC    VE+A+  F  
Sbjct: 391 YNSVVDGLCKSGGILDAWKLVDEM-HYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKH 449

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           ++  E    P+V++YNIL++  CK   +  +I+L N M  +   PD+VT NI L A    
Sbjct: 450 LI-FERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDA---- 504

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL---CRPK 649
                            LF  Q+      ++  ++ + +SP   T+  ++  L    RPK
Sbjct: 505 -----------------LFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPK 547

Query: 650 RIQ 652
             Q
Sbjct: 548 TAQ 550



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 245/488 (50%), Gaps = 48/488 (9%)

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           ++ C+   +D+A+ LF  M   +  P I  +  ++  + K      A+ L   M+  G  
Sbjct: 27  QSTCKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVV 86

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VTFN+LIN  C  G++  A  ++  +   GC PN VT+ TL+ G C+   +  A+ +
Sbjct: 87  PFTVTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYI 146

Query: 320 LDRMVASKCMPNEVTYGTIINGLV--KLGRAVDGARVLMSMEERKF-HVNEYIYSTLISG 376
            D MVA +   ++V YGT+INGL   K+G+     ++L  MEER+    N  +Y+T++ G
Sbjct: 147 YDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHG 206

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K+G   +A  L  +M+ +G  P+   YS+LI GLCR G+  E                
Sbjct: 207 LCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEV--------------- 251

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
               +SL+ GF  + K  +A E++  M +    ++ + Y++L++G C + K+ EAR ++ 
Sbjct: 252 ----TSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFH 307

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M+ RG +PD + Y+ ++HG C    V+EA  LF+ M  +E    PDV++YNIL+   CK
Sbjct: 308 MMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGM--IERGLVPDVWSYNILIKGYCK 365

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK----------------LEAPQDGT 600
              +  +++LL  M  +   P+++T N  +  L +                  + P D T
Sbjct: 366 FERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVT 425

Query: 601 DF--LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN-- 656
            +  L E   R+   ++    FK   ++ ++  +P   ++  ++   C+ +R+  AIN  
Sbjct: 426 TYNILLESLCRIECVEKAIAFFK--HLIFERSFAPNVWSYNILISGCCKNRRLDEAINLF 483

Query: 657 --KCWSNL 662
              C+ NL
Sbjct: 484 NHMCFKNL 491



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 196/387 (50%), Gaps = 26/387 (6%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK---------- 239
           PN + +N V+  +C+ G ++ A  L  +M V+   PDI+TY +L+ GLC+          
Sbjct: 195 PNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSL 254

Query: 240 ------ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
                  N++DEA  L + M   G     + +N+L+NG C N ++G A KL   M  +G 
Sbjct: 255 LNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGE 314

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            P+ +TY  L+HG CL   +D+A +L   M+    +P+  +Y  +I G  K  R  +   
Sbjct: 315 QPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMN 374

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP--NTVVYSALIDG 411
           +L  M  +    N   Y++++ GL K G   DA KL  +M    C+P  +   Y+ L++ 
Sbjct: 375 LLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEM-HYCCQPPPDVTTYNILLES 433

Query: 412 LCRVGKPDEAEEILFEMI-NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           LCR+   ++A      +I     A N ++Y+ L+ G  ++ +  +A+ ++  M   N V 
Sbjct: 434 LCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVP 493

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           + V Y++L+  L    +L +A  +  Q++ +G  P++  Y+ +I+GL   G  + A K+ 
Sbjct: 494 DIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKI- 552

Query: 531 NEMLCLEPKS-QPDVFTYNILLNALCK 556
              L L  +   PDV TY  ++N LCK
Sbjct: 553 --SLYLSIRGYHPDVKTY--IINELCK 575



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 167/335 (49%), Gaps = 9/335 (2%)

Query: 155 KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
           K   S+LN          A E +N ++     +   + + +N+++   C    V  A +L
Sbjct: 249 KEVTSLLNGFCLNNKVDEARELFNVMIERGEQH---DIINYNILMNGYCLNNKVGEARKL 305

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           F  M  R  +PD  TY  LM G C  +++DEA  L   M   G  P   ++N+LI G CK
Sbjct: 306 FHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCK 365

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM-VASKCMPNEV 333
              +G A  L+++MFLK  +PN +TYN+++ GLC  G +  A  L+D M    +  P+  
Sbjct: 366 FERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVT 425

Query: 334 TYGTIINGLVKLGRAVDGARVLMS--MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
           TY  ++  L ++   V+ A       + ER F  N + Y+ LISG  K  + ++A+ L+ 
Sbjct: 426 TYNILLESLCRI-ECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFN 484

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M  K   P+ V Y+ L+D L    + D+A  +L ++++ G + N  TY+ L+ G  + G
Sbjct: 485 HMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGG 544

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +   A +I   ++     Y+    + +I+ LC+ G
Sbjct: 545 RPKTAQKISLYLSIRG--YHPDVKTYIINELCKGG 577



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 82/180 (45%), Gaps = 41/180 (22%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           VE+AI  F  ++ E       +SF                                PN  
Sbjct: 440 VEKAIAFFKHLIFE-------RSFA-------------------------------PNVW 461

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N++I   C+   +D AI LF  M  +N  PDI TY  L+D L    +LD+A+ LL ++
Sbjct: 462 SYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQI 521

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P   T+N+LINGL K G    A K+   + ++G  P+  TY  +I+ LC KG L
Sbjct: 522 VDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--IINELC-KGGL 578


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/425 (31%), Positives = 226/425 (53%), Gaps = 7/425 (1%)

Query: 162 NVIIQEGLYHRALEFYNHIVNAKHMNIL-----PNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +VI+   L      F N    ++ M IL     P+   +N VI   C++  ++ A Q+  
Sbjct: 102 DVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLN 161

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M  R   PDI TY  ++  LC   +L  A+ +LD++ +D C PT +T+ +LI      G
Sbjct: 162 RMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEG 221

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            +  A KL++ M  +G LP+  TYN +I G+C +G +++A  L+  + +  C P+ ++Y 
Sbjct: 222 GINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYN 281

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++   +  G+  +G +++  M  R    N+  YS LIS L + G+ ++A+ + K M+EK
Sbjct: 282 ILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 341

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
              P+T  Y  LI  LC+ G+ D A  I+  MI+NGC  +   Y++++    ++G  ++A
Sbjct: 342 ELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQA 401

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           +EI+  +    C  N   Y+ +I  L   G    A  +   M+S+G  PD + Y+S+I  
Sbjct: 402 LEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISC 461

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC  G VEEA+ L ++M   +   +P V +YNI+L  LCK   I  +I +   M+++GC 
Sbjct: 462 LCRDGLVEEAIGLLDDM--EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCR 519

Query: 577 PDLVT 581
           P+  T
Sbjct: 520 PNETT 524



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 225/430 (52%), Gaps = 6/430 (1%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +LN   + G ++ +L F   +VN  +    P+ +    +IK       ++ A ++  E+ 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYT---PDVILCTKLIKGFFNFKNIEKASRVM-EIL 129

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
             + EPD++ Y  ++ G CK NR++ A  +L+ M+  G  P  VT+N++I  LC   +LG
Sbjct: 130 ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 189

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A K++D + L  C+P  +TY  LI    ++G +++A+ LL+ M+A   +P+  TY  II
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAII 249

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            G+ K G     A ++ S+  +    +   Y+ L+     +GK ++  KL  +M  +GC+
Sbjct: 250 RGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCE 309

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN V YS LI  LCR G+ DEA  +L  MI      + ++Y  L+    + G+   A+ I
Sbjct: 310 PNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGI 369

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
              M  N C+ + V Y+ ++  LC++G   +A  ++ ++   GC P+V +Y++MI  L +
Sbjct: 370 MDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWS 429

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G    AL +   M+       PD  TYN L++ LC+   +  +I LL+ M   G  P +
Sbjct: 430 CGDRSRALGMVPAMI--SKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTV 487

Query: 580 VTCNIFLTAL 589
           ++ NI L  L
Sbjct: 488 ISYNIVLLGL 497



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/534 (26%), Positives = 256/534 (47%), Gaps = 67/534 (12%)

Query: 63  QPFSDEIFNS--TPKLG-----------SYQLGDSTFYSLIQHYANSGDFKS----LEMV 105
            P  ++ FNS   PK+G           SY   ++    L+     +G F      LE +
Sbjct: 35  NPNPNDGFNSRNAPKVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECL 94

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII 165
           + +      ++  K    + K +     +E+A R+   +  E H +  V ++N+V++   
Sbjct: 95  VNKGYTPDVILCTK----LIKGFFNFKNIEKASRVMEIL--ESHTEPDVFAYNAVISGFC 148

Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC---RLGLVDNAIQLFREMPVRN 222
           +      A +  N +   K    LP+ +T+N++I ++C   +LGL   A+++  ++ + N
Sbjct: 149 KVNRIEAATQVLNRM---KARGFLPDIVTYNIMIGSLCNRRKLGL---ALKVLDQLLLDN 202

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
           C P + TY  L++    E  ++EA+ LL+EM   G  P   T+N +I G+CK G + RAA
Sbjct: 203 CMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAA 262

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +L+ ++  KGC P+ ++YN L+     +G  D+   L+  M +  C PN+VTY  +I+ L
Sbjct: 263 ELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSL 322

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            + GR  +   VL  M E++   + Y Y  LIS L KEG+ + A+ +   M+  GC P+ 
Sbjct: 323 CRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDI 382

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V Y+ ++  LC+ G  ++A EI  ++   GC  N  +Y++++   +  G   +A+ +   
Sbjct: 383 VNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPA 442

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREA------------------------------R 492
           M       +E+ Y+ LI  LC DG + EA                              R
Sbjct: 443 MISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRR 502

Query: 493 M-----VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           +     ++ +M+ +GC+P+   Y  +I G+  AG   EA++L N +   +  SQ
Sbjct: 503 IDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSRDVISQ 556



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 188/364 (51%), Gaps = 7/364 (1%)

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
           +C  TV ++  ++   I EG  + A++    ++      +LP+  T+N +I+ +C+ G+V
Sbjct: 202 NCMPTVITYTILIEATIVEGGINEAMKLLEEML---ARGLLPDMYTYNAIIRGMCKEGMV 258

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           + A +L   +  + C+PD+ +Y  L+     + + DE   L+ EM   GC P  VT+++L
Sbjct: 259 ERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSIL 318

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+ LC+ G +  A  ++  M  K   P+  +Y+ LI  LC +G LD A+ ++D M+++ C
Sbjct: 319 ISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGC 378

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
           +P+ V Y TI+  L K G A     +   +       N   Y+T+IS L+  G    A+ 
Sbjct: 379 LPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALG 438

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           +   M+ KG  P+ + Y++LI  LCR G  +EA  +L +M  +G      +Y+ ++ G  
Sbjct: 439 MVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLC 498

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           +  +   A+ ++ +M +  C  NE  Y +LI G+   G   EA  +   + SR    DV+
Sbjct: 499 KVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFSR----DVI 554

Query: 509 AYSS 512
           +  S
Sbjct: 555 SQDS 558



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 195/402 (48%), Gaps = 17/402 (4%)

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L+N  CK G+   +   ++ +  KG  P+ +    LI G     N++KA  +++ ++ S 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVME-ILESH 132

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+   Y  +I+G  K+ R     +VL  M+ R F  +   Y+ +I  L    K   A+
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           K+  Q++   C P  + Y+ LI+     G  +EA ++L EM+  G   + +TY+++++G 
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + G   +A E+   +    C  + + Y++L+      GK  E   +  +M SRGC+P+ 
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNK 312

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V YS +I  LC  G ++EA+ +   M+  E +  PD ++Y+ L++ALCK+  +  +I ++
Sbjct: 313 VTYSILISSLCRFGRIDEAISVLKVMI--EKELTPDTYSYDPLISALCKEGRLDLAIGIM 370

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF--------------LNELAIRLFKR 613
           + M+  GC PD+V  N  L AL +   A Q    F               N +   L+  
Sbjct: 371 DYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSC 430

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              S    +V  M+ K + P   T+  ++  LCR   ++ AI
Sbjct: 431 GDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 159/326 (48%), Gaps = 24/326 (7%)

Query: 350 DGARVLMSMEERKFHVNEYIYS-----TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           +  +V +S E R  H+  Y +       L++   K GK  +++   + ++ KG  P+ ++
Sbjct: 46  NAPKVGVSAEARPAHLQSYDFRETHLMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVIL 105

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
            + LI G       ++A  ++ E++ +    + F Y++++ GF +  +   A ++   M 
Sbjct: 106 CTKLIKGFFNFKNIEKASRVM-EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMK 164

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
               + + V Y+++I  LC   KL  A  V  Q+L   C P V+ Y+ +I      G + 
Sbjct: 165 ARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGIN 224

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA+KL  EML       PD++TYN ++  +CK+  +  + +L+ S+  +GC PD+++ NI
Sbjct: 225 EAMKLLEEMLAR--GLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNI 282

Query: 585 FLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQK 629
            L A   + +   +G   + E+  R               L +  R      +++VM++K
Sbjct: 283 LLRAFLNQGKW-DEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEK 341

Query: 630 FLSPQTSTWERVVQELCRPKRIQAAI 655
            L+P T +++ ++  LC+  R+  AI
Sbjct: 342 ELTPDTYSYDPLISALCKEGRLDLAI 367


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 260/534 (48%), Gaps = 79/534 (14%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ +  +V ++    LP+ + F  ++  V R+G +D  I L R+M +R    + Y++  
Sbjct: 62  AIDLFGDMVRSRP---LPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           LM   C  ++L  A+    ++   G  PT VTF+ L++GLC    +  A  L   M    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---- 174

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN VT+ TL++GLC +G + +AV+LLDRM+     PN++TYGTI++G+ K+G  V   
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 353 RVLMSMEE------------------------------------------RKFHVNEYIY 370
            +L  MEE                                          +K   +   Y
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI+   KEGK  +A +L+ +M+ +G  P+T+ YS++IDG C+  + D AE + + M  
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT 354

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC+ +  T+++L+ G+  + +    +++  +M +   V N + Y+ LIHG C+ G L  
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 414

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKS-----Q 541
           A+ +  +M+S G  P+VV  ++++ GLC+ G +++AL++F  M    + ++        +
Sbjct: 415 AQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVE 474

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PDV TYNIL++ L  +     + +L   M  RG  PD +T N  +               
Sbjct: 475 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHG------------- 521

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                   L K+ R     ++ + M  K  SP   T+  ++   C+  R+   +
Sbjct: 522 --------LCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 567



 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/479 (31%), Positives = 243/479 (50%), Gaps = 28/479 (5%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EA+ LFH M     CK  V +F +++N + +EG    A+   + ++      + PN +
Sbjct: 164 ISEALDLFHQM-----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLED---GLQPNQI 215

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTY-----CTLMDGLCKENRLDEAV 247
           T+  ++  +C++G   +A+ L R+M  V + +P++  +       +++G C   R  EA 
Sbjct: 216 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQ 275

Query: 248 LLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
            LL EM +     P  VT+N LIN   K G+   A +L D M  +G +P+ +TY+++I G
Sbjct: 276 QLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDG 335

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C +  LD A  +   M    C P+ +T+ T+I G  +  R  DG ++L  M E     N
Sbjct: 336 FCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 395

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+TLI G  + G    A  L ++M+  G  PN V  + L+DGLC  GK  +A E+  
Sbjct: 396 TITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 455

Query: 427 EMIN-----------NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            M             NG   +  TY+ L+ G    GK  +A E++++M     V + + Y
Sbjct: 456 AMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 515

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + +IHGLC+  +L EA  ++  M S+   P+VV ++++I+G C AG V++ L+LF EM  
Sbjct: 516 NSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMG- 574

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
                  +  TY  L++   K  NI+ ++D+   MM  G  PD +T    LT L  K E
Sbjct: 575 -RRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEE 632



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 229/465 (49%), Gaps = 18/465 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +L+      G       +L RM  +     + ++  I     K      A+ L   M
Sbjct: 181 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM 240

Query: 145 VDEFHCKRTV-----KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            +  H K  V     +    ++N     G +  A +    ++  K   I P+ +T+N +I
Sbjct: 241 EEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERK--KISPDVVTYNALI 298

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
               + G    A +L+ EM  R   P   TY +++DG CK+NRLD A  +   M   GC 
Sbjct: 299 NAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCS 358

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  +TFN LI G C+   +    KL+  M   G + N +TY TLIHG C  G+L+ A  L
Sbjct: 359 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDL 418

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE-----------Y 368
           L  MV+S   PN VT  T+++GL   G+  D   +  +M++ K  ++             
Sbjct: 419 LQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQ 478

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ LISGL  EGK  +A +L+++M  +G  P+T+ Y+++I GLC+  + DEA ++   M
Sbjct: 479 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSM 538

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            +   + N  T+++L+ G+ ++G+    +E++ +M +   V N + Y  LIHG  + G +
Sbjct: 539 GSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNI 598

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             A  ++ +M++ G  PD +   +M+ GL +   ++ A+ +  ++
Sbjct: 599 NGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDL 643



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 237/479 (49%), Gaps = 38/479 (7%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +++AI LF +M      P +  +C LM  + +  RLD  + L  +M++        +F +
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L+   C   +L  A      +   G  P  VT++TL+HGLC++  + +A+ L  +M    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM---- 174

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C PN VT+ T++NGL + GR V+   +L  M E     N+  Y T++ G+ K G    A+
Sbjct: 175 CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 388 KLWKQMME-KGCKPNTVVY-----SALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTY 440
            L ++M E    KPN V++     + +I+G C  G+  EA+++L EM+     + +  TY
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++L+  F + GK  +A E++ +M     + + + YS +I G C+  +L  A  ++  M +
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT 354

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           +GC PD++ ++++I G C A  V++ +KL +EM   E     +  TY  L++  C+  ++
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEM--TEAGLVANTITYTTLIHGFCQVGDL 412

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTA------LKEKLEA---------------PQDG 599
           + + DLL  M+  G  P++VTCN  L        LK+ LE                P +G
Sbjct: 413 NAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNG 472

Query: 600 TD----FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            +      N L   L    +     ++ E M  + + P T T+  V+  LC+  R+  A
Sbjct: 473 VEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEA 531



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 162/353 (45%), Gaps = 33/353 (9%)

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           +KG L+ A+ L   MV S+ +P+ + +  ++  +V++GR      +   ME R+   N Y
Sbjct: 56  IKG-LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAY 114

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ L+       K   A+  + ++ + G  P  V +S L+ GLC   +  EA ++  +M
Sbjct: 115 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM 174

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
               C  N  T+++LM G    G+  +AV +   M ++    N++ Y  ++ G+C+ G  
Sbjct: 175 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 230

Query: 489 REARMVWTQMLSRG-CKPDVVAY-----SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
             A  +  +M      KP+VV +     + MI+G C++G   EA +L  EML    K  P
Sbjct: 231 VSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEML-ERKKISP 289

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           DV TYN L+NA  K+     + +L + M+ RG  P  +T +  +           DG   
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMI-----------DG--- 335

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                    K+ R      +  +M  K  SP   T+  ++   CR KR+   I
Sbjct: 336 -------FCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGI 381



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 126/255 (49%), Gaps = 19/255 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI  +   GD  + + +L  M        VV   + +      GK   +++A+ +F
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGK---LKDALEMF 454

Query: 142 HTM------VDEFH----CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
             M      +D  H     +  V+++N +++ +I EG +  A E Y  +    H  I+P+
Sbjct: 455 KAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM---PHRGIVPD 511

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T+T+N VI  +C+   +D A Q+F  M  ++  P++ T+ TL++G CK  R+D+ + L  
Sbjct: 512 TITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFC 571

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM   G     +T+  LI+G  K G +  A  +   M   G  P+ +T   ++ GL  K 
Sbjct: 572 EMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKE 631

Query: 312 NLDKAVSLLDRMVAS 326
            L +AV++L+ +  S
Sbjct: 632 ELKRAVAMLEDLQMS 646



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 27/303 (8%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L SG  +    EDA+ L+  M+     P+ + +  L+  + R+G+ D    +  +M    
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              NA++++ LMK F    K   A+  +  + K       V +S L+HGLC + ++ EA 
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++ QM    CKP+VV ++++++GLC  G V EA+ L + M  LE   QP+  TY  +++
Sbjct: 169 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRM--LEDGLQPNQITYGTIVD 222

Query: 553 ALCKQSNISHSIDLLNSMMDRG-CDPDLV-------TC--NIFLTA---------LKEKL 593
            +CK  +   +++LL  M +     P++V       TC  N F ++         L+E L
Sbjct: 223 GMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEML 282

Query: 594 EAPQDGTDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           E  +   D +  N L     K  +     ++ + ML + + P T T+  ++   C+  R+
Sbjct: 283 ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL 342

Query: 652 QAA 654
            AA
Sbjct: 343 DAA 345



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/214 (20%), Positives = 90/214 (42%), Gaps = 27/214 (12%)

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L  GF E      A++++ DM ++  + + + +  L+  +   G+L     +  +M  R 
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
              +  +++ ++   C+   +  AL  F ++  L     P V T++ LL+ LC +  IS 
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKL--GFHPTVVTFSTLLHGLCVEDRISE 166

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           ++DL + M    C P++VT    +  L                      +  R      +
Sbjct: 167 ALDLFHQM----CKPNVVTFTTLMNGL---------------------CREGRVVEAVAL 201

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           ++ ML+  L P   T+  +V  +C+     +A+N
Sbjct: 202 LDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 235


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 161/508 (31%), Positives = 244/508 (48%), Gaps = 44/508 (8%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE----------------- 147
           VL R+R+E  V L   F   FK+   ++L +     F  M+ +                 
Sbjct: 45  VLKRLRQESCVPLALHF---FKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQM 101

Query: 148 ----FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
               FHC   +  F SV++V  Q GL  RA+E +  I   K     P+   +N V+ T+ 
Sbjct: 102 KLQGFHCSEDL--FISVISVYRQVGLAERAVEMFYRI---KEFGCDPSVKIYNHVLDTL- 155

Query: 204 RLGLVDNAIQL----FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
              L +N IQ+    +R+M     EP+++TY  L+  LCK N++D A  LL EM   GC 
Sbjct: 156 ---LGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 212

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  V++  +I+ +C+ G +    +L +        P    YN LI+GLC + +    V L
Sbjct: 213 PNAVSYTTVISSMCEVGMVKEGRQLAERF-----EPVVSVYNALINGLCKERDYKGGVEL 267

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           +  MV     PN ++Y T+IN L   G+      +L  M +R  H N +  S+L+ G F 
Sbjct: 268 MSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFV 327

Query: 380 EGKAEDAMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
            G   DA+ +W QM+   G +PN V Y+ L+ G C  G  D+A  +   M   GC+ N  
Sbjct: 328 RGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIR 387

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TY SL+ GF + G    AV IW  M  + C  N V Y+ ++  LC   K +EA  +   M
Sbjct: 388 TYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIM 447

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
               C P V  +++ I GLC+AG ++ A K+F +M   + +  P++ TYN LL+ L K +
Sbjct: 448 SKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME-QQYRCPPNIVTYNELLDGLAKAN 506

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            I  +  L   +  RG +    T N  L
Sbjct: 507 RIEEAYGLTREIFMRGVEWSTSTYNTLL 534



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 154/583 (26%), Positives = 261/583 (44%), Gaps = 71/583 (12%)

Query: 64  PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF 123
           P +   F S      ++    TF  +I+  A  G   S++ +L +M+ +     E  FI 
Sbjct: 56  PLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFIS 115

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y +  L E A+ +F+  + EF C  +VK +N VL+ ++ E   +R    Y    + 
Sbjct: 116 VISVYRQVGLAERAVEMFYR-IKEFGCDPSVKIYNHVLDTLLGE---NRIQMIYMVYRDM 171

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT----------- 232
           K     PN  T+N+++K +C+   VD A +L  EM  + C P+  +Y T           
Sbjct: 172 KRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMV 231

Query: 233 -------------------LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
                              L++GLCKE      V L+ EM   G  P  ++++ LIN L 
Sbjct: 232 KEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELS 291

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS-KCMPNE 332
            +G++  A  L+  M  +GC PN  T ++L+ G  ++G    A+ + ++M+      PN 
Sbjct: 292 NSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNV 351

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           V Y T++ G    G       V + MEE     N   Y +LI+G  K G  E A+ +W +
Sbjct: 352 VAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNK 411

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+  GC PN VVY+++++ LCR  K  EAE ++  M    CA +  T+++ +KG  ++G+
Sbjct: 412 MLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGR 471

Query: 453 GHKAVEIWKDMAK------NNCVYNEV------------------------------CYS 476
              A ++++ M +      N   YNE+                               Y+
Sbjct: 472 LDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYN 531

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            L+HG C  G    A  +  +M+  G  PD +  + +I   C  G  E A+++ + + C 
Sbjct: 532 TLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCG 591

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
             K +PDV +Y  ++  LC+ +     + L   M+     P L
Sbjct: 592 RRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIPIL 634



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 140/508 (27%), Positives = 241/508 (47%), Gaps = 31/508 (6%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           ++VL  + QE     AL F+  I N+      P  LTF ++I+ +   G VD+   L ++
Sbjct: 43  SAVLKRLRQESCVPLALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQ 100

Query: 218 MPVR--NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           M ++  +C  D++   +++    +    + AV +   ++  GC P+   +N +++ L   
Sbjct: 101 MKLQGFHCSEDLFI--SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGE 158

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +     +  +M   G  PN  TYN L+  LC    +D A  LL  M    C PN V+Y
Sbjct: 159 NRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSY 218

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+I+ + ++G   +G ++       +F     +Y+ LI+GL KE   +  ++L  +M+E
Sbjct: 219 TTVISSMCEVGMVKEGRQL-----AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVE 273

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KG  PN + YS LI+ L   G+ + A  +L +M+  GC  N  T SSL+KG F  G    
Sbjct: 274 KGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFD 333

Query: 456 AVEIWKDMAKNNCVY-NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           A+++W  M +   +  N V Y+ L+ G C  G + +A  V+  M   GC P++  Y S+I
Sbjct: 334 ALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLI 393

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +G    GS+E A+ ++N+ML       P+V  Y  ++ ALC+ S    +  L+  M    
Sbjct: 394 NGFTKRGSLEGAVYIWNKML--TSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKEN 451

Query: 575 CDPDLVTCNIFLTAL----------------KEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           C P + T N F+  L                +++   P +   + NEL   L K  R   
Sbjct: 452 CAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTY-NELLDGLAKANRIEE 510

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELC 646
            + +   +  + +   TST+  ++   C
Sbjct: 511 AYGLTREIFMRGVEWSTSTYNTLLHGSC 538



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 190/425 (44%), Gaps = 54/425 (12%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           TP+TF V+I  L  +G++     L+  M L+G   +E  + ++I      G  ++AV + 
Sbjct: 74  TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 133

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            R+    C P+   Y  +++ L+   R      V   M+   F  N + Y+ L+  L K 
Sbjct: 134 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 193

Query: 381 GKAEDAMKLWKQMMEKGCKPNTV------------------------------VYSALID 410
            K + A KL  +M  KGC PN V                              VY+ALI+
Sbjct: 194 NKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALIN 253

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC+        E++ EM+  G + N  +YS+L+     SG+   A  +   M K  C  
Sbjct: 254 GLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHP 313

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKL 529
           N    S L+ G    G   +A  +W QM+   G +P+VVAY++++ G C+ G++++A+ +
Sbjct: 314 NIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSV 373

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F  M   E    P++ TY  L+N   K+ ++  ++ + N M+  GC P++V     + AL
Sbjct: 374 FLHME--EIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEAL 431

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
               +                FK   +     ++E+M ++  +P   T+   ++ LC   
Sbjct: 432 CRHSK----------------FKEAES-----LIEIMSKENCAPSVPTFNAFIKGLCDAG 470

Query: 650 RIQAA 654
           R+  A
Sbjct: 471 RLDWA 475



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 80/164 (48%), Gaps = 11/164 (6%)

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC P V  Y+ ++  L     ++    ++ +M       +P+VFTYN+LL ALCK + + 
Sbjct: 140 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK--RDGFEPNVFTYNVLLKALCKNNKVD 197

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQDGTDFLNELAIRLFK 612
            +  LL  M ++GC P+ V+    ++++         ++  E  +      N L   L K
Sbjct: 198 GAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCK 257

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +   GG +++  M++K +SP   ++  ++ EL    +I+ A +
Sbjct: 258 ERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFS 301


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 166/516 (32%), Positives = 255/516 (49%), Gaps = 27/516 (5%)

Query: 140  LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            LF  M D+  C   V +FN ++N +  EG   +A    N +   +    +P  +T+N ++
Sbjct: 971  LFREMSDKGICP-NVGTFNILINGLCVEGNLKKA---GNLLKQMEENGFVPTIVTYNTLL 1026

Query: 200  KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
               C+ G    AI+L   M  +  E D+ TY   +D LC  +R  +A LLL +M+ +   
Sbjct: 1027 NWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMIS 1086

Query: 260  PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
            P  VT+N LING  K G++G AA++ + M      PN VTYN LI G C  G+ ++A+ L
Sbjct: 1087 PNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRL 1146

Query: 320  LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            LD M A+    NEVTYGT++NGL K  +     R+L  M      V    Y+ LI GL K
Sbjct: 1147 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCK 1206

Query: 380  EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             G  ++A++L   M + G  P+ + YS+LI+G CRVG    A+EI+  M  +G   N   
Sbjct: 1207 NGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKII 1266

Query: 440  YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
            YS+L+  F + G   +A++++  M  N    +    +VL+  LC DGKL EA      M 
Sbjct: 1267 YSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMS 1326

Query: 500  SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
              G  P+ + Y  +I+G  + G    A   F++M  ++    P  FTY  LL  LCK  N
Sbjct: 1327 RIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDM--IKCGQHPSFFTYGSLLKGLCKGGN 1384

Query: 560  ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
            +  +   LN +      P  V   ++ T L E  ++       L+E A+ LF +      
Sbjct: 1385 LVEAKKFLNRLHYI---PGAVDSVMYNTLLAETCKSGN-----LHE-AVALFDK------ 1429

Query: 620  FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  M+Q  + P + T+  ++  LCR  +   A+
Sbjct: 1430 ------MVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 1459



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 138/441 (31%), Positives = 225/441 (51%), Gaps = 11/441 (2%)

Query: 152  RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM-NILPNTLTFNLVIKTVCRLGLVDN 210
            R   S  S+L  + Q G+  +++  +  +++   + N +P+   F+L+I+   + G++D 
Sbjct: 877  RMYDSAKSILRHLCQMGIGSKSI--FGALMDTYPLCNSIPSV--FDLLIRVYLKEGMIDY 932

Query: 211  AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
            A++ F  + +   +P +YT   ++  + K+ R +    L  EM   G  P   TFN+LIN
Sbjct: 933  AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILIN 992

Query: 271  GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            GLC  G L +A  L+  M   G +P  VTYNTL++  C KG    A+ L+D M+      
Sbjct: 993  GLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEA 1052

Query: 331  NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
            +  TY   I+ L    R+     +L  M +     NE  Y+TLI+G  KEGK   A +++
Sbjct: 1053 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF 1112

Query: 391  KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             +M +    PN V Y+ALI G C VG  +EA  +L  M   G   N  TY +L+ G  + 
Sbjct: 1113 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 1172

Query: 451  GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
             K   A  + + M  N+ V   + Y+VLI GLC++G L EA  +   M   G  PDV+ Y
Sbjct: 1173 EKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITY 1232

Query: 511  SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLN 568
            SS+I+G C  G+++ A     E++C   +S    +   Y+ L+   C+  N++ ++ +  
Sbjct: 1233 SSLINGFCRVGNIKSA----KEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYA 1288

Query: 569  SMMDRGCDPDLVTCNIFLTAL 589
             M   G   D  TCN+ +++L
Sbjct: 1289 VMNCNGHGADHFTCNVLVSSL 1309



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 239/490 (48%), Gaps = 7/490 (1%)

Query: 104  MVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
            ++L +MR+E     E ++  +   + K   +  A ++F+ M  +F       ++N+++  
Sbjct: 1075 LLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEM-SKFDLSPNCVTYNALIGG 1133

Query: 164  IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
                G +  AL   +H+  A    +  N +T+  ++  +C+    + A +L   M V + 
Sbjct: 1134 HCHVGDFEEALRLLDHMEAA---GLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDM 1190

Query: 224  EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
                  Y  L+DGLCK   LDEAV L+  M  DG  P  +T++ LING C+ G +  A +
Sbjct: 1191 VVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 1250

Query: 284  LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
            ++  M+  G + N++ Y+TLI+  C  GN+ +A+ +   M  +    +  T   +++ L 
Sbjct: 1251 IICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLC 1310

Query: 344  KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
            + G+  +  + L  M       N   Y  +I+G    G   +A   +  M++ G  P+  
Sbjct: 1311 RDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFF 1370

Query: 404  VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
             Y +L+ GLC+ G   EA++ L  +     A ++  Y++L+    +SG  H+AV ++  M
Sbjct: 1371 TYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKM 1430

Query: 464  AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK-PDVVAYSSMIHGLCNAGS 522
             +NN + +   YS L+ GLC  GK   A  ++   + RG   P+ V Y+ ++ GL  AG 
Sbjct: 1431 VQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGH 1490

Query: 523  VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
             + A   F EM  ++  + PD   +N ++++  ++  +  + D  ++M   G  P+L T 
Sbjct: 1491 PKAAFYFFEEM--MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATY 1548

Query: 583  NIFLTALKEK 592
            NI L    +K
Sbjct: 1549 NILLHGFSKK 1558



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 148/576 (25%), Positives = 263/576 (45%), Gaps = 28/576 (4%)

Query: 80   QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
            +L + T+ +L+        F+  + +L RMR    VV   ++  +     K  +++EA++
Sbjct: 1156 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 1215

Query: 140  LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            L   M  +      V +++S++N   + G    A E    I       ++ N + ++ +I
Sbjct: 1216 LVGNMYKD-GVNPDVITYSSLINGFCRVGNIKSAKEI---ICRMYRSGLVLNKIIYSTLI 1271

Query: 200  KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
               C+ G V  A++++  M       D +T   L+  LC++ +L EA   L  M   G  
Sbjct: 1272 YNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLV 1331

Query: 260  PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
            P  +T++ +ING    G+   A    D+M   G  P+  TY +L+ GLC  GNL +A   
Sbjct: 1332 PNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKF 1391

Query: 320  LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            L+R+       + V Y T++    K G   +   +   M +     + Y YS+L++GL +
Sbjct: 1392 LNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCR 1451

Query: 380  EGKAEDAMKLWKQMMEKGCK-PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
            +GKA  A+ L+   M +G   PN V+Y+ L+DGL + G P  A     EM+  G   +  
Sbjct: 1452 KGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTV 1511

Query: 439  TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
             +++++      G+  KA + +  M       N   Y++L+HG  +   L     +++ M
Sbjct: 1512 AFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTM 1571

Query: 499  LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
            +  G  PD + + S+I GL  +G  +  +KL  +M+     +  D FT+NIL+N   +  
Sbjct: 1572 MREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIM--EGTLADQFTFNILINKYSESG 1629

Query: 559  NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
             +  + DL+N M   G  PD  T N     L +K  A ++ T  L+E             
Sbjct: 1630 KMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK-SAFRESTVVLHE------------- 1675

Query: 619  GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   ML+  + P+ + +  ++  +CR   IQ A
Sbjct: 1676 -------MLENGVIPKHAQYITLINGMCRVGDIQGA 1704



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 207/455 (45%), Gaps = 9/455 (1%)

Query: 157  FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF- 215
            +N++L    + G  H A+  ++ +V     N+LP++ T++ ++  +CR G    A+ LF 
Sbjct: 1407 YNTLLAETCKSGNLHEAVALFDKMVQN---NVLPDSYTYSSLLTGLCRKGKAVTAVCLFG 1463

Query: 216  REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
              M      P+   Y  L+DGL K      A    +EM   G  P  V FN +I+   + 
Sbjct: 1464 TAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRR 1523

Query: 276  GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            G++ +A      M   G  PN  TYN L+HG   K  L + +SL   M+     P+++T+
Sbjct: 1524 GQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTF 1583

Query: 336  GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             ++I GL K G    G ++L  M       +++ ++ LI+   + GK   A  L   M  
Sbjct: 1584 HSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNT 1643

Query: 396  KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
             G  P+   Y+ + +GL +     E+  +L EM+ NG       Y +L+ G    G    
Sbjct: 1644 LGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQG 1703

Query: 456  AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
            A ++  +M       +EV  S ++ GL   GK  +A +V   ML     P +  +++++H
Sbjct: 1704 AFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMH 1763

Query: 516  GLCNAGSVEEALKLFNEM-LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
              C    + EALKL   M LC     + DV  YN+L+  +C   + + + +L   M  R 
Sbjct: 1764 RFCRDAKIAEALKLKGVMELC---GLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1820

Query: 575  CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
              P++ T  + + A+       Q G   L +L  R
Sbjct: 1821 LCPNITTYAVLVDAISAANNLIQ-GEKLLTDLQER 1854



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 175/373 (46%), Gaps = 4/373 (1%)

Query: 130  KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
            KA   + A   F  M+ +  C  TV +FN++++   + G   +A +F++ +   +   + 
Sbjct: 1487 KAGHPKAAFYFFEEMMKKGTCPDTV-AFNAIIDSCSRRGQMMKANDFFSTM---RWWGVC 1542

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            PN  T+N+++    +   +   + L+  M      PD  T+ +L+ GL K    D  V L
Sbjct: 1543 PNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKL 1602

Query: 250  LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            L +M ++G      TFN+LIN   ++G++ +A  LV+ M   G  P+  TYN + +GL  
Sbjct: 1603 LGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNK 1662

Query: 310  KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            K    ++  +L  M+ +  +P    Y T+ING+ ++G      ++   ME   F  +E  
Sbjct: 1663 KSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVA 1722

Query: 370  YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
             S ++ GL   GK EDAM +   M+     P    ++ L+   CR  K  EA ++   M 
Sbjct: 1723 ESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVME 1782

Query: 430  NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
              G   +   Y+ L+ G   +G    A E++++M   +   N   Y+VL+  +     L 
Sbjct: 1783 LCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLI 1842

Query: 490  EARMVWTQMLSRG 502
            +   + T +  RG
Sbjct: 1843 QGEKLLTDLQERG 1855


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 291/588 (49%), Gaps = 46/588 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI-------FIFKAYGKAHLVEEA 137
           T+ +L+  Y   G          R+   +R+V +  F         + K        ++A
Sbjct: 173 TYNTLVAGYCREG----------RLNDARRLVADMPFAPNSYTNSTLLKGLCSNKEWDDA 222

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
             L   M+    C     +F  +++ + Q GL  RA+   + +   +        + +N 
Sbjct: 223 EELLSEMI-RSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTR---GVIVYNE 278

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I  +  LG V+ A+ LF +MP   C+PDI++Y T+M GLC++ R ++A  L+  M    
Sbjct: 279 IISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKD 335

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C P  VTFN +I+ LC  G +  A ++V+ M   GC P+  TY+ L++ L  +G +D A+
Sbjct: 336 CPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDAL 395

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            LL R +  K  PN V Y +++ GL +  R  D  +++  M   + +++E  +  +I  L
Sbjct: 396 ELL-RTIPWK--PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCL 452

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            ++G  +   ++ ++M + GC P+ ++Y++LI+G    G  D+A E+   M    C  N 
Sbjct: 453 CQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNV 509

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY+ ++KG   + +   A ++  +M K+ C+ NEV +S LI  LC+ G +  A  V+ +
Sbjct: 510 VTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEK 569

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M    C P+V+ YS++I+GL +   V++ALKL N+M C     +PD   Y+  L  LC+ 
Sbjct: 570 MPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPC-----KPDTICYSAALKGLCRA 624

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAPQDGTDFL--NELAIRLFKR 613
                + +L+  M+ + C PD VT +I +  L  K  LE+  + ++ +   E    +F  
Sbjct: 625 ERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIY 684

Query: 614 QRTSGGF-------KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                GF         ++++      P T  +   ++ LCR KR + A
Sbjct: 685 SSLINGFAEQYRAEDALQLLRNMPCEPDTICYSAALKGLCRAKRWEDA 732



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 160/542 (29%), Positives = 265/542 (48%), Gaps = 56/542 (10%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRM---RREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           D TF  +I     +G       VL +M   R  + V++    I      G+   VEEA+ 
Sbjct: 238 DLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGR---VEEALH 294

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           LF    D+  CK  + S+N+V+  + ++G +  A      +V     +  P+ +TFN VI
Sbjct: 295 LF----DQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMV---RKDCPPDEVTFNTVI 347

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD------------------------ 235
             +C  GLVD A+++  +MP   C+PD +TY  L++                        
Sbjct: 348 SYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWKPNT 407

Query: 236 --------GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
                   GLC+ +R D+   L+ EM  +      VTF ++I+ LC+ G +   A+++  
Sbjct: 408 VCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLRE 467

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   GC P+ + YN+LI+G    G++D A+ L   M    C  N VTY  ++ GL +  +
Sbjct: 468 MTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQ 524

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             D  +++  M + +   NE  +STLIS L ++G  E A++++++M +  C PN ++YS 
Sbjct: 525 WEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYST 584

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI+GL      D+A ++L +M    C  +   YS+ +KG   + +   A E+  +M + N
Sbjct: 585 LINGLSDQECVDDALKLLNDM---PCKPDTICYSAALKGLCRAERWEDAGELILEMIRKN 641

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C+ +EV +S+LI+ LC  G L  A  V   ML   C P+V  YSS+I+G       E+AL
Sbjct: 642 CLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDAL 701

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           +L   M C     +PD   Y+  L  LC+      + +L+  M  + C  D  T ++ + 
Sbjct: 702 QLLRNMPC-----EPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEATFSMLIG 756

Query: 588 AL 589
           +L
Sbjct: 757 SL 758



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/494 (29%), Positives = 243/494 (49%), Gaps = 18/494 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++ ++++     G ++    ++  M R+     E +F  +        LV+ A+ +   M
Sbjct: 307 SYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQM 366

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             ++ CK    ++++++N + + G    ALE    I         PNT+ +  V+K +CR
Sbjct: 367 -PKYGCKPDNFTYSALVNALSERGCVDDALELLRTI------PWKPNTVCYRSVLKGLCR 419

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               D+  +L  EM       D  T+  ++D LC++  +D    +L EM   GC P  + 
Sbjct: 420 ADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIII 479

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LING  +NG +  A +L  NM    C  N VTYN ++ GLC     + A  L+  MV
Sbjct: 480 YNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYMLKGLCRAEQWEDAGKLVAEMV 536

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
             +C+PNEVT+ T+I+ L + G       V   M +     N  IYSTLI+GL  +   +
Sbjct: 537 KDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMPNVIIYSTLINGLSDQECVD 596

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA+KL   M    CKP+T+ YSA + GLCR  + ++A E++ EMI   C  +  T+S L+
Sbjct: 597 DALKLLNDM---PCKPDTICYSAALKGLCRAERWEDAGELILEMIRKNCLPDEVTFSILI 653

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
                 G    A E+ + M K  C+ N   YS LI+G  E  +  +A  +   M    C+
Sbjct: 654 NNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFAEQYRAEDALQLLRNM---PCE 710

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD + YS+ + GLC A   E+A +L  EM     +   D  T+++L+ +LC+   +  + 
Sbjct: 711 PDTICYSAALKGLCRAKRWEDARELIAEMF--RKQCPLDEATFSMLIGSLCQNGLVDMAT 768

Query: 565 DLLNSMMDRGCDPD 578
           ++   M   GC P+
Sbjct: 769 EVFEQMSVYGCSPN 782



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/486 (29%), Positives = 241/486 (49%), Gaps = 18/486 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF ++I +  + G       V+ +M +        ++  +  A  +   V++A+ L  T+
Sbjct: 342 TFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTI 401

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                 K     + SVL  + +   +    +    ++    +N+  + +TF L+I  +C+
Sbjct: 402 ----PWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIR-NQLNL--DEVTFGLIIDCLCQ 454

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLVD   ++ REM    C PDI  Y +L++G  +   +D+A+ L   M    C    VT
Sbjct: 455 KGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMS---CKRNVVT 511

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N ++ GLC+  +   A KLV  M    CLPNEVT++TLI  LC KG ++ A+ + ++M 
Sbjct: 512 YNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMP 571

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              CMPN + Y T+INGL       D  ++L  M  +    +   YS  + GL +  + E
Sbjct: 572 KYNCMPNVIIYSTLINGLSDQECVDDALKLLNDMPCKP---DTICYSAALKGLCRAERWE 628

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA +L  +M+ K C P+ V +S LI+ LC  G  + A E+   M+   C  N F YSSL+
Sbjct: 629 DAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLI 688

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            GF E  +   A+++ ++M    C  + +CYS  + GLC   +  +AR +  +M  + C 
Sbjct: 689 NGFAEQYRAEDALQLLRNMP---CEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCP 745

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D   +S +I  LC  G V+ A ++F +M        P+   ++ L+N   +Q  +   +
Sbjct: 746 LDEATFSMLIGSLCQNGLVDMATEVFEQMSVY--GCSPNRKIHSSLVNGYSEQRRVDEGL 803

Query: 565 DLLNSM 570
            LL+SM
Sbjct: 804 KLLSSM 809



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 222/452 (49%), Gaps = 45/452 (9%)

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG-LVDNAIQLFREMPVRNCEPDIYTYCT 232
           L+    ++ A       + +T N ++   CR G  + +A ++   + +     D+ TY T
Sbjct: 118 LDDAERVLGASERAGTADAVTRNTLVAGYCRAGGRLADAERMLASLALSG-SADVVTYNT 176

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+ G C+E RL++A  L+ +M      P   T + L+ GLC N E   A +L+  M   G
Sbjct: 177 LVAGYCREGRLNDARRLVADMPF---APNSYTNSTLLKGLCSNKEWDDAEELLSEMIRSG 233

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C PN++T+  +IH LC  G  D+A+ +LD+M   +C    + Y  II+ L +LGR  +  
Sbjct: 234 CPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCLAELGRVEEAL 293

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M  +    + + Y+T++ GL ++G+ EDA  L   M+ K C P+ V ++ +I  L
Sbjct: 294 HLFDQMPCKP---DIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDEVTFNTVISYL 350

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI-----WK------ 461
           C  G  D A E++ +M   GC  + FTYS+L+    E G    A+E+     WK      
Sbjct: 351 CHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRTIPWKPNTVCY 410

Query: 462 ---------------------DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
                                +M +N    +EV + ++I  LC+ G +     V  +M  
Sbjct: 411 RSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLVDYGAEVLREMTK 470

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            GC PD++ Y+S+I+G    GSV++AL+LF  M C     + +V TYN +L  LC+    
Sbjct: 471 FGCSPDIIIYNSLINGFSENGSVDDALELFKNMSC-----KRNVVTYNYMLKGLCRAEQW 525

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
             +  L+  M+   C P+ VT +  ++ L +K
Sbjct: 526 EDAGKLVAEMVKDECLPNEVTFSTLISYLCQK 557



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 161/316 (50%), Gaps = 19/316 (6%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  V   +LI  LC  G L  A +++      G   + VT NTL+ G C  G     ++ 
Sbjct: 100 PAAVPCTLLIKKLCAAGRLDDAERVLGASERAG-TADAVTRNTLVAGYCRAGG---RLAD 155

Query: 320 LDRMVASKCMPNE---VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
            +RM+AS  +      VTY T++ G  + GR  D  R++  M    F  N Y  STL+ G
Sbjct: 156 AERMLASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADM---PFAPNSYTNSTLLKG 212

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L    + +DA +L  +M+  GC PN + +  +I  LC+ G  D A  +L +M    C   
Sbjct: 213 LCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRG 272

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
              Y+ ++    E G+  +A+ ++  M    C  +   Y+ ++ GLC DG+  +A  +  
Sbjct: 273 VIVYNEIISCLAELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIA 329

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK--SQPDVFTYNILLNAL 554
            M+ + C PD V ++++I  LC+ G V+ A+++  +M    PK   +PD FTY+ L+NAL
Sbjct: 330 GMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQM----PKYGCKPDNFTYSALVNAL 385

Query: 555 CKQSNISHSIDLLNSM 570
            ++  +  +++LL ++
Sbjct: 386 SERGCVDDALELLRTI 401



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/332 (23%), Positives = 130/332 (39%), Gaps = 88/332 (26%)

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA------------------------ 434
           +P  V  + LI  LC  G+ D+AE +L      G A                        
Sbjct: 99  RPAAVPCTLLIKKLCAAGRLDDAERVLGASERAGTADAVTRNTLVAGYCRAGGRLADAER 158

Query: 435 ----------ANAFTYSSLMKGFFESGKGHKAVEI------------------------- 459
                     A+  TY++L+ G+   G+ + A  +                         
Sbjct: 159 MLASLALSGSADVVTYNTLVAGYCREGRLNDARRLVADMPFAPNSYTNSTLLKGLCSNKE 218

Query: 460 WKD-------MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
           W D       M ++ C  N++ + ++IH LC++G    A  V  QM    C   V+ Y+ 
Sbjct: 219 WDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNE 278

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I  L   G VEEAL LF++M C     +PD+F+YN ++  LC+      +  L+  M+ 
Sbjct: 279 IISCLAELGRVEEALHLFDQMPC-----KPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVR 333

Query: 573 RGCDPDLVTCNIFLT----------ALKEKLEAPQDGTDFLN----ELAIRLFKRQRTSG 618
           + C PD VT N  ++          A++   + P+ G    N     L   L +R     
Sbjct: 334 KDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDD 393

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
             +++  +  K   P T  +  V++ LCR  R
Sbjct: 394 ALELLRTIPWK---PNTVCYRSVLKGLCRADR 422


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/498 (31%), Positives = 254/498 (51%), Gaps = 36/498 (7%)

Query: 109 MRREKRVVLEKSFI-FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN----- 162
           MRR  R  L   F  +  +  G  H V     L   +V   H  RT K +  +L+     
Sbjct: 1   MRRSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSP 60

Query: 163 ------VII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
                 ++I    + G   RALEF   +      ++ P+   FN +I  + + G  D A+
Sbjct: 61  NLVTFKILIRGNCKAGQATRALEFLRAL---DEFSVAPDVYIFNFLIHGLFKDGNPDQAV 117

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP--VTFNVLIN 270
           +LF  M      PDI+TY T++ GLCK   L++A  LL+EM   G    P  VT+N LIN
Sbjct: 118 KLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLIN 177

Query: 271 -GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
            G+CK+G++  A +++D M L G  P+ +TYN++IH LC+ G + +A  +L  M    C 
Sbjct: 178 AGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCS 234

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+ VT+ T+++G  K G       VL  M       +   Y+ L++GL + G+ + A  L
Sbjct: 235 PDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYL 294

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE---------EILFEMINNGCAANAFTY 440
            ++++ +G  P+ + Y++L+DGLC+ G+ +EA          EIL EM++       FTY
Sbjct: 295 LEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTY 354

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  + G   KAV +  D+     V + V Y+ LI GLC+  ++REA  +  +M S
Sbjct: 355 NIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMAS 414

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            GC P+ V   S++ GLC  G V++A  L  EM     +  P+V  Y  L++ LCK   +
Sbjct: 415 LGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMS--RKRHAPNVVVYTSLIDGLCKSDRM 472

Query: 561 SHSIDLLNSMMDRGCDPD 578
             +  +L++M  +G   D
Sbjct: 473 DDACVVLDAMRGQGVALD 490



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 146/472 (30%), Positives = 248/472 (52%), Gaps = 30/472 (6%)

Query: 209 DNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           D AIQ F     ++  + D+++Y  L+D L K         +  ++   GC P  VTF +
Sbjct: 8   DLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKI 67

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI G CK G+  RA + +  +      P+   +N LIHGL   GN D+AV L + M +S+
Sbjct: 68  LIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSR 127

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER--KFHVNEYIYSTLI-SGLFKEGKAE 384
             P+  TY T+I+GL K G       +L  M  R  K   +   Y+TLI +G+ K+G  E
Sbjct: 128 VNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVE 187

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+++   M   G  P+ + Y+++I  LC  G+  EA EIL  M    C+ +  T+++L+
Sbjct: 188 EALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLL 244

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            GF ++G   +A+E+ ++M + N + + + Y++L++GLC  G+++ A  +  +++ +G  
Sbjct: 245 DGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI 304

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-------PDVFTYNILLNALCKQ 557
           PDV+AY+S++ GLC +G +EEA KL  EM   E  ++       P +FTYNI+L  L K 
Sbjct: 305 PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKD 364

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA---------- 607
            +IS ++ L++ ++ RG  PD+VT N  +  L  K    ++  D  +E+A          
Sbjct: 365 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLC-KANRVREACDLADEMASLGCFPNDVT 423

Query: 608 -----IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  L +  R    + +V  M +K  +P    +  ++  LC+  R+  A
Sbjct: 424 LGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDA 475



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 233/459 (50%), Gaps = 48/459 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + +   KA     A+     + DEF     V  FN +++ + ++G   +A++ + +
Sbjct: 64  TFKILIRGNCKAGQATRALEFLRAL-DEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFEN 122

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMD-G 236
           + +++   + P+  T+N VI  +C+ G ++ A +L  EM  R  +  PDI TY TL++ G
Sbjct: 123 MESSR---VNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAG 179

Query: 237 LCKENRLDEAVLLLDEMQVDG--------------------------------CFPTPVT 264
           +CK+  ++EA+ +LD M++ G                                C P  VT
Sbjct: 180 ICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVT 239

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN L++G CK G L RA ++++ M  +  LP+ +TY  L++GLC  G +  A  LL+ +V
Sbjct: 240 FNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIV 299

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF-----HVNE----YIYSTLIS 375
               +P+ + Y ++++GL K G   +  +++  M  R+       +N     + Y+ ++ 
Sbjct: 300 RQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLG 359

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL K+G    A+ L   ++ +G  P+ V Y+ LIDGLC+  +  EA ++  EM + GC  
Sbjct: 360 GLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFP 419

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  T  S++ G    G+   A  +  +M++     N V Y+ LI GLC+  ++ +A +V 
Sbjct: 420 NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVL 479

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
             M  +G   D  AY  +I  + + G V EA+ +++EM+
Sbjct: 480 DAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMV 518



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 189/363 (52%), Gaps = 16/363 (4%)

Query: 154 VKSFNSVLNV-IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           + ++N+++N  I ++G    ALE  + +   K     P+ +T+N +I  +C  G V  A 
Sbjct: 169 IVTYNTLINAGICKDGDVEEALEILDGM---KLAGPAPDVITYNSIIHALCVAGRVVEAA 225

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           ++ + M   +C PD+ T+ TL+DG CK   L  A+ +L+EM  +   P  +T+ +L+NGL
Sbjct: 226 EILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGL 282

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL---------LDRM 323
           C+ G++  A  L++ +  +G +P+ + Y +L+ GLC  G +++A  L         L  M
Sbjct: 283 CRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEM 342

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V+   +P   TY  ++ GL+K G       ++  +  R +  +   Y+TLI GL K  + 
Sbjct: 343 VSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRV 402

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +A  L  +M   GC PN V   +++ GLCRVG+ D+A  ++ EM     A N   Y+SL
Sbjct: 403 REACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSL 462

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  +S +   A  +   M       ++  Y  LI  +   G++ EA  ++ +M++RG 
Sbjct: 463 IDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGF 522

Query: 504 KPD 506
            PD
Sbjct: 523 LPD 525



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 176/352 (50%), Gaps = 21/352 (5%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  A   A  V EA  +  TM     C   + +FN++L+   + G+  RALE    +   
Sbjct: 211 IIHALCVAGRVVEAAEILKTM----SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 266

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
              NILP+ +T+ +++  +CR+G V  A  L  E+  +   PD+  Y +L+DGLCK   +
Sbjct: 267 ---NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 323

Query: 244 DEAVLLLDEMQVDGCF---------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +EA  L+ EM               P   T+N+++ GL K+G + +A  L+ ++  +G +
Sbjct: 324 EEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYV 383

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+ VTYNTLI GLC    + +A  L D M +  C PN+VT G+++ GL ++GR  D   +
Sbjct: 384 PDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSL 443

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           ++ M  ++   N  +Y++LI GL K  + +DA  +   M  +G   +   Y  LI  +  
Sbjct: 444 VVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIH 503

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            G+  EA  +  EM+  G   +  T  +L     E      +V  W ++ +N
Sbjct: 504 GGRVAEAMAMYDEMVARGFLPDGSTSKTL-----EEAAMSNSVFEWTNLEEN 550


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 144/563 (25%), Positives = 269/563 (47%), Gaps = 72/563 (12%)

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA-KHMNILPNTLTFNLVI 199
           F     +F   R+  S N +++++I++       E Y  ++   K      +   F ++I
Sbjct: 78  FFIWASKFRRLRSWVSHNMIIDMLIKDN----GFELYWQVLKEIKRCGFSISADAFTVLI 133

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           +   ++ +++ A++ F  M   +C+PD++TY T++  + ++  +  A+ + + M    C 
Sbjct: 134 QAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCL 193

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   TF++LI+G+CK+G+   A ++ D M  +  LPN++TY  +I GLC     D A  L
Sbjct: 194 PNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRL 253

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              M    C+P+ VTY  +++G  KLGR  +   +L   E+ ++ +++  YS LI GLF+
Sbjct: 254 FIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFR 313

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             + EDA   +++M E   KP+ ++Y+ ++ GL + GK  +A  +L EM   G   +   
Sbjct: 314 ARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHC 373

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y++L+KG+ + G   +A  +  +++KN+C  +   Y++LI G+C  G + +A+ ++ +M 
Sbjct: 374 YNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEME 433

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM-------------------------- 533
             GC P VV ++++I G C AG++E+A  LF +M                          
Sbjct: 434 KHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQ 493

Query: 534 -----LC---------------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
                LC                +    P++ TYNIL++  CK  NI+ +  L   +  +
Sbjct: 494 TMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLK 553

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           G  PD VT    +                       L    R    F +++ +L+   +P
Sbjct: 554 GLSPDSVTYGTLING---------------------LLSANREEDAFTVLDQILKNGCTP 592

Query: 634 QTSTWERVVQELCRPKRIQAAIN 656
            T  ++  +   CR  +I  A +
Sbjct: 593 ITEVYKSFMTWSCRRNKITLAFS 615



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 185/381 (48%), Gaps = 20/381 (5%)

Query: 167 EGLYHRALEFYNHIVNAKHM---NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           +GL+ RA  F +  V  + M   NI P+ + + +++K + + G   +A++L  EM  R  
Sbjct: 309 DGLF-RARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGL 367

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
            PD + Y  L+ G C    LDEA  L  E+  + CF +  T+ +LI G+C++G +G A +
Sbjct: 368 VPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQ 427

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM-------------VASKCMP 330
           + + M   GC P+ VT+N LI G C  GN++KA  L  +M               +  + 
Sbjct: 428 IFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVL 487

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           +  +  T++  L   G  +    +LM + +  F  N   Y+ LI G  K G    A KL+
Sbjct: 488 DTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLF 547

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           K++  KG  P++V Y  LI+GL    + ++A  +L +++ NGC      Y S M      
Sbjct: 548 KELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRR 607

Query: 451 GKGHKAVEIW-KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            K   A  +W K +       +EV  SV      E G++ EA     +M  +     +  
Sbjct: 608 NKITLAFSLWLKYLRSIPGRDSEVLKSV--EENFEKGEVEEAVRGLLEMDFKLNDFQLAP 665

Query: 510 YSSMIHGLCNAGSVEEALKLF 530
           Y+  + GLC AG +EEALK+F
Sbjct: 666 YTIWLIGLCQAGRLEEALKIF 686



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 89/392 (22%), Positives = 170/392 (43%), Gaps = 30/392 (7%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           + +IFN   K G Y     TF +LI  +  +G+ +  +++ Y+M   +   L     F+ 
Sbjct: 425 AQQIFNEMEKHGCYP-SVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSL-----FLR 478

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
            + G   +++ A     TMV++                +   GL  +A   YN ++    
Sbjct: 479 LSQGANRVLDTAS--LQTMVEQ----------------LCDSGLILKA---YNILMQLTD 517

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
               PN +T+N++I   C+ G ++ A +LF+E+ ++   PD  TY TL++GL   NR ++
Sbjct: 518 SGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREED 577

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  +LD++  +GC P    +   +   C+  ++  A  L    +L+     +      + 
Sbjct: 578 AFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLK-YLRSIPGRDSEVLKSVE 636

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
               KG +++AV  L  M           Y   + GL + GR  +  ++  ++EE    V
Sbjct: 637 ENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLV 696

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV-GKPDEAEEI 424
                  LI  L K G  + A +++   ++KG      + + L+  L R   K + A ++
Sbjct: 697 TPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLRSEDKRNRAFDL 756

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           L  M + G   ++  + +  K   +   GH+ 
Sbjct: 757 LSRMKSLGYDLDSHLHQT-TKFLLQGDAGHQV 787


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 159/558 (28%), Positives = 277/558 (49%), Gaps = 62/558 (11%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI--FIFK 126
           +F+S  ++ +Y     T   ++ +Y  + +F  ++ V+  M  EKR V         +  
Sbjct: 86  VFSSNSEVNTY-----TLNIMVHNYCKALEFDKVDAVISEM--EKRCVFPDVVTHNVMVD 138

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           A  +A   E A+ L  +MV +   K  + ++NSVL  + + G++ +A E +  + +    
Sbjct: 139 ARFRAGDAEAAMALVDSMVSK-GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDD---F 194

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT----------------- 229
            + P+  +F ++I   CR+G ++ A+++++EM  R  +PD+ +                 
Sbjct: 195 GVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA 254

Query: 230 ------------------YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
                             Y  ++ G C+   + +A+ + DEM   GC P  VT+N L+NG
Sbjct: 255 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 314

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK   L  A  L++ M  +G  P+  T+ TLIHG C++G LDKA+ L D M+  +  P+
Sbjct: 315 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 374

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY T+I+G+ + G       +   M  R+   N   YS LI    ++G+ EDA     
Sbjct: 375 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M+ KG  PN + Y+++I G CR G   + ++ L +M+ N  + +  TY++L+ G+ +  
Sbjct: 435 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           K H A ++   M K     + V Y++LI+G    G ++EA  ++ +M ++G +PD   Y 
Sbjct: 495 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 554

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM- 570
           SMI+G   AG+ +EA +L +EML    + +    T   +        NI +S + L  M 
Sbjct: 555 SMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFV--------NIQNSAESLKQMP 606

Query: 571 MDRGCDPDLVTCNIFLTA 588
           MD       VTC+I+  A
Sbjct: 607 MDLK-----VTCSIYFFA 619



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/474 (28%), Positives = 241/474 (50%), Gaps = 10/474 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V + N +++   + G    A+   + +V+     + P  +T+N V+K +CR G+ D A +
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSK---GLKPGIVTYNSVLKGLCRSGMWDKAWE 186

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F+EM      PD+ ++  L+ G C+   ++EA+ +  EM+  G  P  V+F+ LI    
Sbjct: 187 VFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFA 246

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           + G++  A   +  M   G +P+ V Y  +I G C  G +  A+ + D MV   C+P+ V
Sbjct: 247 RRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVV 306

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T++NGL K  R +D   +L  M ER    +   ++TLI G   EGK + A++L+  M
Sbjct: 307 TYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 366

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + +  +P+ V Y+ LIDG+CR G  D+A ++  +M +     N  TYS L+    E G+ 
Sbjct: 367 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQV 426

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A     +M     + N + Y+ +I G C  G + + +    +M+     PD++ Y+++
Sbjct: 427 EDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 486

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           IHG      + +A KL N M   + K QPDV TYN+L+N      N+  +  +   M  +
Sbjct: 487 IHGYIKEDKMHDAFKLLNMM--EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 544

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFL--NELAIRLFKRQRTSGGFKIVEV 625
           G +PD  T   +++ +   + A      F   +E+  R  +++R +G  + V +
Sbjct: 545 GIEPDRYT---YMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAAGTVQFVNI 595



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 228/464 (49%), Gaps = 15/464 (3%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN- 187
           G  HL  +A RL       F     V ++   LN+++    Y +ALEF         M  
Sbjct: 74  GWPHLAADAYRLV------FSSNSEVNTY--TLNIMVHN--YCKALEFDKVDAVISEMEK 123

Query: 188 --ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             + P+ +T N+++    R G  + A+ L   M  +  +P I TY +++ GLC+    D+
Sbjct: 124 RCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDK 183

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  +  EM   G  P   +F +LI G C+ GE+  A K+   M  +G  P+ V+++ LI 
Sbjct: 184 AWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIG 243

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
               +G +D A++ L  M     +P+ V Y  +I G  + G   D  RV   M       
Sbjct: 244 LFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLP 303

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   Y+TL++GL KE +  DA  L  +M E+G  P+   ++ LI G C  GK D+A ++ 
Sbjct: 304 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 363

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M+N     +  TY++L+ G    G   KA ++W DM       N V YS+LI   CE 
Sbjct: 364 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 423

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G++ +A     +M+++G  P+++ Y+S+I G C +G+V +  K   +M+    K  PD+ 
Sbjct: 424 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMV--NKVSPDLI 481

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           TYN L++   K+  +  +  LLN M      PD+VT N+ +   
Sbjct: 482 TYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGF 525



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 224/465 (48%), Gaps = 16/465 (3%)

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G    A   +R +   N E + YT   ++   CK    D+   ++ EM+    FP  V
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVV 131

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T NV+++   + G+   A  LVD+M  KG  P  VTYN+++ GLC  G  DKA  +   M
Sbjct: 132 THNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEM 191

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                 P+  ++  +I G  ++G   +  ++   M  R    +   +S LI    + GK 
Sbjct: 192 DDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKM 251

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + AM   ++M   G  P+ V+Y+ +I G CR G   +A  +  EM+  GC  +  TY++L
Sbjct: 252 DHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTL 311

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  +  +   A  +  +M +     +   ++ LIHG C +GKL +A  ++  ML++  
Sbjct: 312 LNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRL 371

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +PD+V Y+++I G+C  G +++A  L+++M   E    P+  TY+IL+++ C++  +  +
Sbjct: 372 RPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE--IFPNHVTYSILIDSHCEKGQVEDA 429

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDFL--NELAIR 609
              L+ M+++G  P+++T N  +                +K+   +   D +  N L   
Sbjct: 430 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 489

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             K  +    FK++ +M ++ + P   T+  ++        +Q A
Sbjct: 490 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 534



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 95/219 (43%), Gaps = 11/219 (5%)

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P   V+  LI    +  KP EA E    ++++     A   ++L+     +G  H A + 
Sbjct: 23  PQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHLAADA 82

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           ++ +  +N   N    ++++H  C+  +  +   V ++M  R   PDVV ++ M+     
Sbjct: 83  YRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFR 142

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           AG  E A+ L + M  +    +P + TYN +L  LC+      + ++   M D G  PD+
Sbjct: 143 AGDAEAAMALVDSM--VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV 200

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            +  I +       E          E A++++K  R  G
Sbjct: 201 RSFTILIGGFCRVGEI---------EEALKIYKEMRHRG 230


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/433 (32%), Positives = 224/433 (51%), Gaps = 35/433 (8%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +T++ +    CR+G +D A ++   MPV    P  Y Y  LM  LC   ++ +A++LLD
Sbjct: 120 AVTYSALADGYCRVGRLDEARRVVDGMPVL---PSAYAYNPLMHALCVRGQVRDALVLLD 176

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            M   GC P  VT+N+L+   CK     +A +L+D M ++GC P  VTYN ++ G+C +G
Sbjct: 177 NMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREG 236

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           ++D A  LL+ + +  C PN V Y T++ GL   GR  D   ++  M       +E   S
Sbjct: 237 DVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLS 296

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +IS L +EG  + A++L ++M +  C  N V Y+A++ GLC  G  D A  +L  M  +
Sbjct: 297 VVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTD 356

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           GC  N FTY+ L+KG   + +   A ++   M++ +C+ + + ++ +I  LC+ G   +A
Sbjct: 357 GCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQA 416

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM---------------LCL 536
             V+ QM  +GC P+ V YSS+I GL   G +E++L+L NEM                CL
Sbjct: 417 VEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAECL 476

Query: 537 EPKSQ-----------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
             + +                 P    YN +L  LC+      +ID+L++M+  GC PD 
Sbjct: 477 NEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDE 536

Query: 580 VTCNIFLTALKEK 592
            T +I +  L  +
Sbjct: 537 STYSILIQGLAHE 549



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 237/456 (51%), Gaps = 14/456 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   Y +   ++EA R+    VD      +  ++N +++ +   G    AL   ++
Sbjct: 122 TYSALADGYCRVGRLDEARRV----VDGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDN 177

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++   +    P+ +T+N++++  C+      A++L   M V  C P   TY  +MDG+C+
Sbjct: 178 ML---YRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCR 234

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E  +D A  LL+ +   GC P  V +N ++ GL   G      +L+  MF + C P+E T
Sbjct: 235 EGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEAT 294

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-M 358
            + +I  LC +G   +A+ LL++M    C  N VTY  +++GL + G  VDGA  L+S M
Sbjct: 295 LSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGH-VDGALYLLSNM 353

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           +      N + Y+ L+ GL    + EDA  L  +M +  C P+ + ++ +I  LC+ G  
Sbjct: 354 QTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLT 413

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN-EVCYSV 477
            +A E+  +M   GC  N+ TYSS+++G  ++GK  +++E+  +M      +N E+ Y +
Sbjct: 414 MQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKG--FNPEINYHL 471

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           L   L E+ KL EA  +  ++   G  P  V Y++++ GLC  G  ++A+ + + M  + 
Sbjct: 472 LAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNM--VS 529

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
               PD  TY+IL+  L  +  +  + +LL+++  R
Sbjct: 530 DGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSR 565



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 204/433 (47%), Gaps = 64/433 (14%)

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
           C PD+     L+  LC+  R  +A  +++     G   T VT++ L +G C+ G L  A 
Sbjct: 84  CPPDVALANRLVRDLCRRGRPADAARVVEAC---GSAATAVTYSALADGYCRVGRLDEAR 140

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           ++VD M +   LP+   YN L+H LC++G +  A+ LLD M+   C P+ VTY  ++   
Sbjct: 141 RVVDGMPV---LPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAA 197

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K GR   G R                                AM+L   M  +GC P  
Sbjct: 198 CK-GR---GYR-------------------------------QAMELIDLMRVEGCTPTN 222

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V Y+ ++DG+CR G  D A E+L  + + GC  N   Y++++KG   +G+     E+  +
Sbjct: 223 VTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAE 282

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M   NC  +E   SV+I  LC++G  + A  +  +M    C  ++V Y++++ GLC  G 
Sbjct: 283 MFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGH 342

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           V+ AL L + M       +P++FTYNIL+  LC       + DL+  M    C PD++T 
Sbjct: 343 VDGALYLLSNMQ--TDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTF 400

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           N  +  L +K          L   A+ +FK+            M +K   P + T+  V+
Sbjct: 401 NTIIGFLCQK---------GLTMQAVEVFKQ------------MPEKGCCPNSVTYSSVI 439

Query: 643 QELCRPKRIQAAI 655
           + L +  +++ ++
Sbjct: 440 EGLAKTGKMEQSL 452



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 196/389 (50%), Gaps = 5/389 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L++       ++    ++  MR E       ++  I     +   V+ A  L +++
Sbjct: 189 TYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSL 248

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
              + C     ++N+VL  +   G +    E    + +    N  P+  T ++VI ++C+
Sbjct: 249 -PSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSE---NCPPSEATLSVVISSLCQ 304

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GL   AI+L  +M   +C  +I TY  ++ GLC++  +D A+ LL  MQ DGC P   T
Sbjct: 305 EGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFT 364

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N+L+ GLC       A  L+  M    CLP+ +T+NT+I  LC KG   +AV +  +M 
Sbjct: 365 YNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMP 424

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C PN VTY ++I GL K G+      +L  M  + F+  E  Y  L   L +E K  
Sbjct: 425 EKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFN-PEINYHLLAECLNEEDKLV 483

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+++  ++ + G  P  V+Y+ ++ GLCR GK D+A +IL  M+++GC  +  TYS L+
Sbjct: 484 EAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILI 543

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           +G    G   +A E+   ++  + + + +
Sbjct: 544 QGLAHEGYMKEARELLSTLSSRDVIVDNL 572



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 164/337 (48%), Gaps = 35/337 (10%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           ++ E+ NS P  G        + ++++    +G ++ +E ++  M  E     E +   +
Sbjct: 240 YARELLNSLPSYGCTP-NTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVV 298

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF-------- 176
             +  +  L + AIRL   M  +  C   + ++N+V++ + ++G    AL          
Sbjct: 299 ISSLCQEGLFQRAIRLLEKM-SKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDG 357

Query: 177 -------YNHIV----NAK-------------HMNILPNTLTFNLVIKTVCRLGLVDNAI 212
                  YN +V    NA+               + LP+ LTFN +I  +C+ GL   A+
Sbjct: 358 CKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAV 417

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           ++F++MP + C P+  TY ++++GL K  ++++++ LL+EM   G F   + +++L   L
Sbjct: 418 EVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKG-FNPEINYHLLAECL 476

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            +  +L  A ++V  +   G  P  V YNT++ GLC  G  D+A+ +L  MV+  CMP+E
Sbjct: 477 NEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDE 536

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            TY  +I GL   G   +   +L ++  R   V+  I
Sbjct: 537 STYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLI 573



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 136/286 (47%), Gaps = 40/286 (13%)

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +S L   G+ + A+++ +  +   C P+  + + L+  LCR G+P +A  ++      G 
Sbjct: 63  LSSLVHRGELDAALRVVESSL---CPPDVALANRLVRDLCRRGRPADAARVVEAC---GS 116

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           AA A TYS+L  G+   G+  +A  +   M      Y    Y+ L+H LC  G++R+A +
Sbjct: 117 AATAVTYSALADGYCRVGRLDEARRVVDGMPVLPSAY---AYNPLMHALCVRGQVRDALV 173

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   ML RGC PDVV Y+ ++   C      +A++L + M        P   TYN++++ 
Sbjct: 174 LLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRV--EGCTPTNVTYNVIMDG 231

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
           +C++ ++ ++ +LLNS+   GC P+ V  N  L  L                        
Sbjct: 232 MCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGL------------------------ 267

Query: 614 QRTSGGFKIVEVMLQKFLS----PQTSTWERVVQELCRPKRIQAAI 655
            RT+G ++ VE ++ +  S    P  +T   V+  LC+    Q AI
Sbjct: 268 -RTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAI 312


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 230/415 (55%), Gaps = 6/415 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V ++N+VL + + +     A  F++ +++     + PN  T+N++++ +C  G    A+
Sbjct: 155 SVLAYNAVL-LALSDASLTSARRFFDSMLSD---GVAPNVYTYNILVRALCGRGHRKEAL 210

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            + R+M    C P++ TY TL+    +   +D A  L+  M+  G  P  VTFN ++NG+
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G++  A K+ D M  +G  P+ V+YNTL+ G C  G   +A+S+   M     MP+ 
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VT+ ++I+ + K G       ++  M ER   +NE  ++ LI G  K+G  +DA+   + 
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M +   KP+ V Y+ALI+G C VG+ DEA E+L EM   G   +  TYS+++  + ++  
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCD 450

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            H A E+ + M +   + + + YS LI  LC + +L +A +++  M+  G +PD   Y+S
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           +I G C  G+VE AL L ++M  ++    PDV TY++L+N L K +    +  LL
Sbjct: 511 LIDGHCKEGNVESALSLHDKM--VKAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 209/407 (51%), Gaps = 3/407 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P+ L +N V+  +    L  +A + F  M      P++YTY  L+  LC      EA+ 
Sbjct: 153 VPSVLAYNAVLLALSDASLT-SARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALS 211

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L +M+  GC P  VT+N L+    + GE+  A +LV  M   G  PN VT+N++++G+C
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC 271

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G ++ A  + D MV     P+ V+Y T++ G  K G + +   V   M ++    +  
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            +++LI  + K G  E A+ L +QM E+G + N V ++ALIDG C+ G  D+A   +  M
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
                  +   Y++L+ G+   G+  +A E+  +M       + V YS +I   C++   
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  QML +G  PD + YSS+I  LC    + +A  LF  M+ L    QPD FTY 
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKL--GLQPDEFTYT 509

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
            L++  CK+ N+  ++ L + M+  G  PD+VT ++ +  L +   A
Sbjct: 510 SLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARA 556



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 146/510 (28%), Positives = 247/510 (48%), Gaps = 25/510 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  +  +G+    E ++  MR         +F  +     KA  +E+A ++F  M
Sbjct: 227 TYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 286

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V E      V S+N+++    + G  H AL  +  +       I+P+ +TF  +I  +C+
Sbjct: 287 VREGLAPDGV-SYNTLVGGYCKAGCSHEALSVFAEMTQK---GIMPDVVTFTSLIHVMCK 342

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A+ L R+M  R  + +  T+  L+DG CK+  LD+A+L +  M+     P+ V 
Sbjct: 343 AGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVC 402

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LING C  G +  A +L+  M  KG  P+ VTY+T+I   C   +   A  L  +M+
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 462

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+ +TY ++I  L    R  D   +  +M +     +E+ Y++LI G  KEG  E
Sbjct: 463 EKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 522

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+ L  +M++ G  P+ V YS LI+GL +  +  EA+++LF++ +         Y +LM
Sbjct: 523 SALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM 582

Query: 445 ---------------KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                          KGF   G  ++A ++++ M   N   +   YSVLIHG C  G + 
Sbjct: 583 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 642

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKSQPDVFTY 547
           +A     QML  G  P+  +  S+I GL   G V EA ++  ++L  C    S  D    
Sbjct: 643 KALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYC----SLADAEAS 698

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDP 577
             L++    + N+   +D+L+ M   G  P
Sbjct: 699 KALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 224/441 (50%), Gaps = 7/441 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +  A R F +M+ +      V ++N ++  +   G    AL     +  A      PN +
Sbjct: 171 LTSARRFFDSMLSD-GVAPNVYTYNILVRALCGRGHRKEALSILRDMRGA---GCGPNVV 226

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N ++    R G VD A +L   M     +P++ T+ ++++G+CK  ++++A  + DEM
Sbjct: 227 TYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 286

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  V++N L+ G CK G    A  +   M  KG +P+ VT+ +LIH +C  GNL
Sbjct: 287 VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 346

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           ++AV+L+ +M       NEVT+  +I+G  K G   D    +  M++ +   +   Y+ L
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNAL 406

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G    G+ ++A +L  +M  KG KP+ V YS +I   C+      A E+  +M+  G 
Sbjct: 407 INGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 466

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +A TYSSL++      +   A  ++K+M K     +E  Y+ LI G C++G +  A  
Sbjct: 467 LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALS 526

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  +M+  G  PDVV YS +I+GL  +    EA +L  ++   +P   P    Y+ L++ 
Sbjct: 527 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPI--PANTKYDALMHC 584

Query: 554 LCKQSNISHSIDLLNSMMDRG 574
            C+++ +   + LL     +G
Sbjct: 585 -CRKAELKSVLALLKGFCMKG 604



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 212/444 (47%), Gaps = 65/444 (14%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A++L    P R  +  I +Y +L       NR   A   L   +  G  P+ + +N ++ 
Sbjct: 111 ALRLLPSSPPRPFDSLIKSYASL------PNRASLAAAALAFARSAGYVPSVLAYNAVLL 164

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            L  +  L  A +  D+M   G  PN  TYN L+  LC +G+  +A+S+L  M  + C P
Sbjct: 165 AL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGP 223

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N VTY                                   +TL++  F+ G+ + A +L 
Sbjct: 224 NVVTY-----------------------------------NTLVAAFFRAGEVDGAERLV 248

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M E G KPN V ++++++G+C+ GK ++A ++  EM+  G A +  +Y++L+ G+ ++
Sbjct: 249 GMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKA 308

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G  H+A+ ++ +M +   + + V ++ LIH +C+ G L  A  +  QM  RG + + V +
Sbjct: 309 GCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTF 368

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++I G C  G +++AL     M   + + +P V  YN L+N  C    +  + +LL+ M
Sbjct: 369 TALIDGFCKKGFLDDALLAVRGMK--QCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
             +G  PD+VT +  ++A  +  +                     T   F++ + ML+K 
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCD---------------------THSAFELNQQMLEKG 465

Query: 631 LSPQTSTWERVVQELCRPKRIQAA 654
           + P   T+  +++ LC  KR+  A
Sbjct: 466 VLPDAITYSSLIRVLCGEKRLSDA 489



 Score = 45.1 bits (105), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 94/229 (41%), Gaps = 19/229 (8%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E ++  +   + K   VE A+ L   MV        V +++ ++N + +     RA+E  
Sbjct: 505 EFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVV-TYSVLINGLSKSA---RAMEAQ 560

Query: 178 NHIVNAKHMNILPNTLTFNLV---------------IKTVCRLGLVDNAIQLFREMPVRN 222
             +    H + +P    ++ +               +K  C  GL++ A ++++ M  RN
Sbjct: 561 QLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 620

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
              D   Y  L+ G C+   + +A+    +M   G  P   +   LI GL +NG +  A 
Sbjct: 621 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEAD 680

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           +++  +     L +      LI     +GN+D  + +L  M     +P+
Sbjct: 681 QVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 729


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 254/526 (48%), Gaps = 21/526 (3%)

Query: 143 TMVDEFHC---KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            ++DE  C   K  V  + ++++  ++EG    A +    +V A    + PN +T++ ++
Sbjct: 313 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA---GVQPNKITYDNLV 369

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           + +C++G +D A  L ++M   +  PD  TY  +++G  + +   +A  LL EM+  G  
Sbjct: 370 RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGIS 429

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   T++++I+GLC++GE  +A+ L++ M  KG  PN   Y  LI G C +GN+  A  +
Sbjct: 430 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 489

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            D+M     +P+   Y ++I GL K+GR  +  +    M+ER    NE+ YS LI G  K
Sbjct: 490 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 549

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G  E A +L ++M++ G KPN V+Y  L++   +    ++       M++ G   +   
Sbjct: 550 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRI 609

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y  L+     SG    A  +   + KN  V +   YS LI GLC+     +A  +  +M 
Sbjct: 610 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 669

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            +G  P++V Y+++I GLC +G +  A  +FN +L       P+  TY  L++  CK  +
Sbjct: 670 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILA--KGLVPNCVTYTSLIDGSCKVGD 727

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTA-------------LKEKLEAPQDGTDFLNEL 606
           IS++  L N M+  G  PD    ++  T              ++E            N L
Sbjct: 728 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNL 787

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                KR +     K++ V++ + L P   T E ++  L    ++ 
Sbjct: 788 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLS 833



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/434 (32%), Positives = 215/434 (49%), Gaps = 37/434 (8%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT+T+N++I  +CR G V+ A    ++M      PD +TY  L++GLCK  R +EA  LL
Sbjct: 256 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 315

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM      P  V +  LI+G  + G    A K++  M   G  PN++TY+ L+ GLC  
Sbjct: 316 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 375

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D+A  LL +MV     P+ +TY  II G  +     D  R+L  ME      N Y Y
Sbjct: 376 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTY 435

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S +I GL + G+ E A  L ++M  KG KPN  VY+ LI G CR G    A EI  +M  
Sbjct: 436 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 495

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
                + + Y+SL+ G  + G+  ++ + +  M +   + NE  YS LIHG  ++G L  
Sbjct: 496 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 555

Query: 491 ARMVWTQMLSRGCKP-DVV----------------------------------AYSSMIH 515
           A  +  +ML  G KP DV+                                   Y  +IH
Sbjct: 556 AEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIH 615

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            L ++G++E A ++ + +   +  S PDV  Y+ L++ LCK ++   +  +L+ M  +G 
Sbjct: 616 NLSSSGNMEAAFRVLSGI--EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGV 673

Query: 576 DPDLVTCNIFLTAL 589
           DP++V  N  +  L
Sbjct: 674 DPNIVCYNALIDGL 687



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 229/474 (48%), Gaps = 18/474 (3%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
            ++  C++   D A ++  EM  R C  +  TY  L+ GLC+   ++EA     +M+  G
Sbjct: 228 ALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYG 287

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P   T+  LINGLCK+     A  L+D M      PN V Y  LI G   +GN D+A 
Sbjct: 288 LVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAF 347

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI-YSTLISG 376
            ++  MVA+   PN++TY  ++ GL K+G+ +D A +L+    R  H  + I Y+ +I G
Sbjct: 348 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQ-MDRASLLLKQMVRDSHRPDTITYNLIIEG 406

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
            F+    +DA +L  +M   G  PN   YS +I GLC+ G+P++A ++L EM   G   N
Sbjct: 407 HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPN 466

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
           AF Y+ L+ G+   G    A EI+  M K N + +  CY+ LI GL + G++ E+   + 
Sbjct: 467 AFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFA 526

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           QM  RG  P+   YS +IHG    G +E A +L   M  L+   +P+   Y  LL +  K
Sbjct: 527 QMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM--LDTGLKPNDVIYIDLLESYFK 584

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAP--------QDGT----DF 602
             +I        SM+D+G   D     I +  L     +EA         ++G+      
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 644

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            + L   L K       F I++ M +K + P    +  ++  LC+   I  A N
Sbjct: 645 YSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARN 698



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/492 (28%), Positives = 227/492 (46%), Gaps = 41/492 (8%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
            +AY K    + A ++   M  E  C     ++N ++  + + G    A  F     + +
Sbjct: 229 LEAYCKVREFDTAKKVLVEM-RERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKK---DME 284

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              ++P+  T+  +I  +C+    + A  L  EM     +P++  Y  L+DG  +E   D
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA---------------------- 282
           EA  ++ EM   G  P  +T++ L+ GLCK G++ RA+                      
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 283 -------------KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
                        +L+  M   G  PN  TY+ +IHGLC  G  +KA  LL+ M      
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PN   Y  +I+G  + G       +   M +     + Y Y++LI GL K G+ E++ K 
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + QM E+G  PN   YS LI G  + G  + AE+++  M++ G   N   Y  L++ +F+
Sbjct: 525 FAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFK 584

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           S    K    +K M     + +   Y +LIH L   G +  A  V + +   G  PDV  
Sbjct: 585 SDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHV 644

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           YSS+I GLC     E+A  + +EM   +    P++  YN L++ LCK  +IS++ ++ NS
Sbjct: 645 YSSLISGLCKTADREKAFGILDEM--SKKGVDPNIVCYNALIDGLCKSGDISYARNVFNS 702

Query: 570 MMDRGCDPDLVT 581
           ++ +G  P+ VT
Sbjct: 703 ILAKGLVPNCVT 714



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 201/451 (44%), Gaps = 61/451 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y  +GD +S E ++ RM        +  +I + ++Y K+  +E+    F +M
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +D+                                        ++ +   + ++I  +  
Sbjct: 599 LDQ---------------------------------------GVMLDNRIYGILIHNLSS 619

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A ++   +      PD++ Y +L+ GLCK    ++A  +LDEM   G  P  V 
Sbjct: 620 SGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 679

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+GLCK+G++  A  + +++  KG +PN VTY +LI G C  G++  A  L + M+
Sbjct: 680 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 739

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER--KFHVNEYIYSTLISGLFKEGK 382
           A+   P+   Y  +  G    G   D  + +  +EE   + H +   ++ L+ G  K GK
Sbjct: 740 ATGITPDAFVYSVLTTGCSSAG---DLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGK 796

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++ +KL   +M +G  PN +    +I GL   GK  E   I  E+      + A  +SS
Sbjct: 797 MQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 856

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L       GK    +++  DM +++               C++G L +A M+   ++++ 
Sbjct: 857 LFMDMINQGK--IPLDVVDDMIRDH---------------CKEGNLDKALMLRDVIVAKS 899

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
                 +Y +++  LC  G + EAL L  EM
Sbjct: 900 APMGCSSYLAIVDNLCRKGKLSEALNLLKEM 930



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 152/310 (49%), Gaps = 3/310 (0%)

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           + + +   C     D A  +L  M    C  N VTY  +I GL + G   +       ME
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +     + + Y  LI+GL K  ++ +A  L  +M     KPN VVY+ LIDG  R G  D
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA +++ EM+  G   N  TY +L++G  + G+  +A  + K M +++   + + Y+++I
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G       ++A  + ++M + G  P+V  YS MIHGLC +G  E+A  L  EM     K
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             P+ F Y  L++  C++ N+S + ++ + M      PDL   N  +  L  K+   ++ 
Sbjct: 465 --PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS-KVGRVEES 521

Query: 600 TDFLNELAIR 609
           T +  ++  R
Sbjct: 522 TKYFAQMQER 531



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 140/333 (42%), Gaps = 59/333 (17%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D+  Y  LI + ++SG+ ++   VL  + +   V     +  +     K    E+A  + 
Sbjct: 606 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 665

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  +      +  +N++++ + + G    A   +N I+ AK   ++PN +T+  +I  
Sbjct: 666 DEMSKK-GVDPNIVCYNALIDGLCKSGDISYARNVFNSIL-AK--GLVPNCVTYTSLIDG 721

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C++G + NA  L+ EM      PD + Y  L  G      L++A+ L++EM + G   +
Sbjct: 722 SCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HAS 780

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL-------------- 307
             +FN L++G CK G++    KL+  +  +G +PN +T   +I GL              
Sbjct: 781 ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFV 840

Query: 308 ---------------------------------------CLKGNLDKAVSLLDRMVASKC 328
                                                  C +GNLDKA+ L D +VA   
Sbjct: 841 ELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSA 900

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
                +Y  I++ L + G+  +   +L  M++R
Sbjct: 901 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKR 933


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 136/394 (34%), Positives = 215/394 (54%), Gaps = 3/394 (0%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I  +C+     +A++L   M     +  + TY TL+DGLCK   LD A  LL +M 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             GC P  VT+  LI+GLCK      A + V  M   GC P+ VTYN+LIHGLC+   +D
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 315 KA-VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            A + L + M+ S  +P+ VTY T I+GL K G+   G  +L  M+      +   + ++
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSI 192

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ISGL K  + +DA +++K M+E+GC P+++ YS ++D L R  + D  EE+L  M+ +G 
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGH 252

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
            A + TY+ L+     +G    A   ++   +  CV     ++  I  LC  GK   A+ 
Sbjct: 253 YALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKN 312

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   M+  G  P++++Y+ +I GLC +G+V++A KL  +ML      +PDV  +N L++ 
Sbjct: 313 ILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML-DSGCCKPDVIFFNTLISG 371

Query: 554 LCKQSNISHSIDLLNSMMDRG-CDPDLVTCNIFL 586
            CK   +S +  LL  M  +  C PD+VT N  +
Sbjct: 372 FCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMI 405



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 212/407 (52%), Gaps = 7/407 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA     A+ L H M    +   +V ++ ++++ + + G    A      + +A      
Sbjct: 22  KARKPRHALELLHVMAANGY-DASVVTYTTLIDGLCKSGDLDAAQALLQKMADA---GCA 77

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T+  +I  +C+     +AIQ  + M    CEPD+ TY +L+ GLC  NR+D+A L+
Sbjct: 78  PNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLV 137

Query: 250 LDEMQVD-GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L E+ ++ G  P  VT+N  I+GLCK G+L +  ++++ M   G  P+ VT+ ++I GLC
Sbjct: 138 LQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLC 197

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
               +D A  +   M+   C+P+ +TY  +++ L +  R      VL  M +   +    
Sbjct: 198 KANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSA 257

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ LI  L + G  E A   ++Q ME GC      ++A I  LCR GK   A+ IL  M
Sbjct: 258 TYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGM 317

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY-SVLIHGLCEDGK 487
           I +G   N  +Y+ ++ G  +SG    A ++ + M  + C   +V + + LI G C+ G+
Sbjct: 318 IESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGR 377

Query: 488 LREARMVWTQMLSRG-CKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           L +A+ +  +M ++  C PDVV Y++MI G    GS+++A  L  EM
Sbjct: 378 LSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 168/326 (51%), Gaps = 3/326 (0%)

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI GLCK  +   A +L+  M   G   + VTY TLI GLC  G+LD A +LL +M 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C PN VTY  +I+GL K  R  D  + +  M       +   Y++LI GL    + +
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMD 132

Query: 385 DA-MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           DA + L + M+E G  P+ V Y+  I GLC+ GK D+  E+L EM   G + +  T+ S+
Sbjct: 133 DAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSI 192

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  ++ +   A +++K M +  CV + + YS+++  L    +L     V   M+  G 
Sbjct: 193 ISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGH 252

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
                 Y+ +IH L  AG +E A   + +   +E     +V+T+N  + ALC+      +
Sbjct: 253 YALSATYAPLIHALIRAGDIESASWAYEQ--AMEAGCVMEVYTHNAFIGALCRSGKFPLA 310

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++L  M++ G  P+L++ N  +  L
Sbjct: 311 KNILLGMIESGSLPNLLSYNFVIDGL 336



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 86/233 (36%), Positives = 135/233 (57%), Gaps = 3/233 (1%)

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M  R F ++  IY+TLI+GL K  K   A++L   M   G   + V Y+ LIDGLC+ G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            D A+ +L +M + GCA N  TY++L+ G  ++ + H A++  K M ++ C  + V Y+ 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 478 LIHGLCEDGKLREARMVWTQ-MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           LIHGLC   ++ +A +V  + M+  G  PDVV Y++ I GLC AG +++ L++  EM   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM--D 178

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                PDV T+  +++ LCK + I  +  +   M++RGC PD +T +I L  L
Sbjct: 179 RGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNL 231



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 193/389 (49%), Gaps = 7/389 (1%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
            Y     T+ +LI     SGD  + + +L +M          ++  +     KA    +A
Sbjct: 40  GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDA 99

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLN-VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           I+    M+    C+  + ++NS+++ + +   +    L     ++ +     +P+ +T+N
Sbjct: 100 IQTVKRMLRS-GCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGR---IPDVVTYN 155

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
             I  +C+ G +D  +++  EM      PD+ T+C+++ GLCK NR+D+A  +   M   
Sbjct: 156 TFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLER 215

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           GC P  +T++++++ L +   L    +++++M   G      TY  LIH L   G+++ A
Sbjct: 216 GCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESA 275

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
               ++ + + C+    T+   I  L + G+      +L+ M E     N   Y+ +I G
Sbjct: 276 SWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDG 335

Query: 377 LFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLCRVGKPDEAEEILFEM-INNGCA 434
           L K G  +DA KL ++M++ G CKP+ + ++ LI G C+ G+  +A+++L EM   N C 
Sbjct: 336 LCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICV 395

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            +  TY++++ G  + G   +A  + ++M
Sbjct: 396 PDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 24/220 (10%)

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +A  Y++L+ G  ++ K   A+E+   MA N    + V Y+ LI GLC+ G L  A+ + 
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M   GC P+VV Y+++I GLC A    +A++    ML      +PD+ TYN L++ LC
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRML--RSGCEPDLVTYNSLIHGLC 126

Query: 556 KQSNISHSIDLLNSMM-DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
             + +  +  +L  +M + G  PD+VT N F++ L                      K  
Sbjct: 127 MANRMDDAGLVLQELMIESGRIPDVVTYNTFISGL---------------------CKAG 165

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +   G +++E M +  +SP   T+  ++  LC+  RI  A
Sbjct: 166 KLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDA 205



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 108/243 (44%), Gaps = 6/243 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF S+I     +        V   M     V    ++  +     +A+ ++    +   M
Sbjct: 188 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHM 247

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V   H   +  ++  +++ +I+ G    A   Y   + A     +    T N  I  +CR
Sbjct: 248 VKSGHYALSA-TYAPLIHALIRAGDIESASWAYEQAMEA---GCVMEVYTHNAFIGALCR 303

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF-PTPV 263
            G    A  +   M      P++ +Y  ++DGLCK   +D+A  L  +M   GC  P  +
Sbjct: 304 SGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVI 363

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            FN LI+G CK G L +A +L+  M  K  C+P+ VTYNT+I G    G+L +A  LL+ 
Sbjct: 364 FFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEE 423

Query: 323 MVA 325
           M A
Sbjct: 424 MQA 426



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 91/196 (46%), Gaps = 13/196 (6%)

Query: 67  DEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE----KSFI 122
           +E+     K G Y L  +T+  LI     +GD +S     Y    E   V+E     +FI
Sbjct: 241 EEVLEHMVKSGHYAL-SATYAPLIHALIRAGDIESASWA-YEQAMEAGCVMEVYTHNAFI 298

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
                 GK  L   A  +   M++       + S+N V++ + + G    A +    +++
Sbjct: 299 GALCRSGKFPL---AKNILLGMIESGSLPNLL-SYNFVIDGLCKSGNVDDAWKLSRKMLD 354

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDGLCKEN 241
           +      P+ + FN +I   C+ G +  A QL +EM  +N C PD+ TY T++DG  K  
Sbjct: 355 SGCCK--PDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFG 412

Query: 242 RLDEAVLLLDEMQVDG 257
            L +A LLL+EMQ  G
Sbjct: 413 SLKQAKLLLEEMQAVG 428


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 162/606 (26%), Positives = 287/606 (47%), Gaps = 39/606 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVV-----LEKSFI------------FIFKA 127
           T+ ++I  +   G+ K  + VL  M  + R++     L++S +             +   
Sbjct: 226 TYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILING 285

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           +       EA  +   M+D    K    ++N++++  +++G   +A    + +V      
Sbjct: 286 FCMEKRSREAKLMLLEMID-VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC---G 341

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I  N + +N ++  VC+ G ++ A+++ +EM  +  EPD  TY  L++G C+   +  A 
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 401

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LLDEM+     PT +T++V+INGLC+ G L     ++  M + G  PN V Y TL+   
Sbjct: 402 ELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAH 461

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
             +G ++++  +L+RM     +P+   Y ++I G  K  R  +    LM M ER+   N 
Sbjct: 462 AKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNA 521

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + Y   I G  K G+ E A + + +M+  G  PN  +Y+ALI+G C+ G   EA  +   
Sbjct: 522 HTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRF 581

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           +++     +  TYS L+ G   +GK H+A  I+ ++ +   + N   Y+ LI G C+ G 
Sbjct: 582 ILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGN 641

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFT 546
           + +A  +  +M  +G  PD+V Y+ +I GLC AG +E A  LF++   +E +   P+  T
Sbjct: 642 VDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD---IEGRGLTPNCVT 698

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT-------------ALKEKL 593
           Y  +++  CK  N + +  LL  M+ RG  PD    N+ L                +E L
Sbjct: 699 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 758

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
           E     T   N L     K  +      ++E M++K   P   T+  ++   C+   +  
Sbjct: 759 EKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 818

Query: 654 AINKCW 659
           A  + W
Sbjct: 819 A-KRLW 823



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/496 (29%), Positives = 255/496 (51%), Gaps = 13/496 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
            + +L+  +A  G  +   M+L RMR +   +L   F +  +   + KA  +EEA     
Sbjct: 453 VYTTLMTAHAKEGRVEESRMILERMREQG--ILPDVFCYNSLIIGFCKAKRMEEARTYLM 510

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+ E   +    ++ + ++   + G    A  ++N +++     +LPN   +  +I+  
Sbjct: 511 EML-ERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSC---GVLPNVGIYTALIEGH 566

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ G V  A  +FR +  R    D+ TY  L+ GL +  ++ EA  +  E+Q  G  P  
Sbjct: 567 CKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNA 626

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+N LI+G CK G + +A++L++ M +KG  P+ VTYN LI GLC  G +++A +L D 
Sbjct: 627 FTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDD 686

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           +      PN VTY  +++G  K        ++L  M  R    + +IY+ +++   KE K
Sbjct: 687 IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEK 746

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            E A+ L+++M+EKG   +TV ++ LI+G C+ GK  EA  +L EMI      N  TY+S
Sbjct: 747 FEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTS 805

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+    ++G   +A  +W +M + N +     Y+ L+HG    G + E   ++ +M+++G
Sbjct: 806 LIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKG 865

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC----LEPKSQPDVFTYNILLNALCKQS 558
            +PD + Y  MI   C  G+V EA KL +E+L     ++   +  + T +++        
Sbjct: 866 IEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAG 925

Query: 559 NISHSIDLLNSMMDRG 574
           N+  + ++L SM+  G
Sbjct: 926 NMDEAAEVLRSMVKFG 941



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 154/585 (26%), Positives = 255/585 (43%), Gaps = 105/585 (17%)

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT- 232
           +E  N  +  K+    P+ L+ N ++  + +   V+   ++F  M      PD+YTY   
Sbjct: 171 VEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNM 230

Query: 233 ---------------------------------------------------LMDGLCKEN 241
                                                              L++G C E 
Sbjct: 231 ISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEK 290

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLI-------------------------------- 269
           R  EA L+L EM   G  P P+T+N LI                                
Sbjct: 291 RSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 350

Query: 270 ---NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
              NG+CK G++ +A +++  M  KG  P+  TY+ LI G C   N+ +A  LLD M   
Sbjct: 351 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 410

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
           K  P  +TY  IINGL + G       +L  M       N  +Y+TL++   KEG+ E++
Sbjct: 411 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 470

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
             + ++M E+G  P+   Y++LI G C+  + +EA   L EM+      NA TY + + G
Sbjct: 471 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 530

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           + ++G+   A   + +M     + N   Y+ LI G C++G + EA  V+  +LSR    D
Sbjct: 531 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 590

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           V  YS +IHGL   G + EA  +F+E+   E    P+ FTYN L++  CKQ N+  +  L
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSEL--QEKGLLPNAFTYNSLISGSCKQGNVDKASQL 648

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF--------------- 611
           L  M  +G +PD+VT NI +  L +  E  +   +  +++  R                 
Sbjct: 649 LEEMCIKGINPDIVTYNILIDGLCKAGEI-ERAKNLFDDIEGRGLTPNCVTYAAMVDGYC 707

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           K +  +  F+++E ML + + P    +  ++   C+ ++ + A++
Sbjct: 708 KSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALD 752



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/577 (24%), Positives = 263/577 (45%), Gaps = 83/577 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVV-LEKSFIF---IFKAYGKAHLVEEAIRL 140
           T+ +LI  +   GD +      +R++ E     +E + I    +     KA  +E+A+ +
Sbjct: 313 TYNALIDGFMRQGDIEQA----FRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEI 368

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
              M+++   +   ++++ ++    +     RA E  + +   K   + P  LT++++I 
Sbjct: 369 MQEMMEK-GVEPDSQTYSLLIEGHCRGQNMARAFELLDEM---KKRKLAPTVLTYSVIIN 424

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +CR G +     + REM +   +P+   Y TLM    KE R++E+ ++L+ M+  G  P
Sbjct: 425 GLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 484

Query: 261 TPVTFNVLINGLCKN-----------------------------------GELGRAAKLV 285
               +N LI G CK                                    GE+  A +  
Sbjct: 485 DVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYF 544

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
           + M   G LPN   Y  LI G C +GN+ +A S+   +++ + + +  TY  +I+GL + 
Sbjct: 545 NEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRN 604

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           G+  +   +   ++E+    N + Y++LISG  K+G  + A +L ++M  KG  P+ V Y
Sbjct: 605 GKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTY 664

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM-- 463
           + LIDGLC+ G+ + A+ +  ++   G   N  TY++++ G+ +S     A ++ ++M  
Sbjct: 665 NILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLL 724

Query: 464 ---AKNNCVYN-----------------------------EVCYSVLIHGLCEDGKLREA 491
                +  +YN                              V ++ LI G C+ GKL+EA
Sbjct: 725 RGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEA 784

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +  +M+ +   P+ V Y+S+I   C AG + EA +L+ EM   E    P   TY  LL
Sbjct: 785 NHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ--ERNVMPTAKTYTSLL 842

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +      N+S    L   M+ +G +PD +T  + + A
Sbjct: 843 HGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDA 879



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 193/455 (42%), Gaps = 79/455 (17%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ + I  Y+ +G+ +  +     M     +     +  + + + K   V EA  +F  +
Sbjct: 523 TYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFI 582

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +      + V++++ +++ + + G  H A   ++ +   +   +LPN  T+N +I   C+
Sbjct: 583 LSR-RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL---QEKGLLPNAFTYNSLISGSCK 638

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD A QL  EM ++   PDI TY  L+DGLCK   ++ A  L D+++  G  P  VT
Sbjct: 639 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 698

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE--------------------------- 297
           +  +++G CK+     A +L++ M L+G  P+                            
Sbjct: 699 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 758

Query: 298 -------VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
                  V++NTLI G C  G L +A  LL+ M+  + +PN VTY ++I+   K G   +
Sbjct: 759 EKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 818

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
             R+ + M+ER        Y++L+ G    G   +   L+++M+ KG +P+ + Y  +ID
Sbjct: 819 AKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMID 878

Query: 411 GLCR-----------------------------------------VGKPDEAEEILFEMI 429
             CR                                          G  DEA E+L  M+
Sbjct: 879 AYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMV 938

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
             G  +N  +   L+ G         +  + K MA
Sbjct: 939 KFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 973



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 188/400 (47%), Gaps = 51/400 (12%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG----CLPNEVTYNTLIHGLCLKGN-LD 314
           P  V F++L++   K G L  A     N+FL        P+ ++ N+L+  L LKGN ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAV----NVFLGPKNFEFRPSLLSCNSLLGDL-LKGNKVE 206

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
               + D M A K +P+  TY  +I+   K+G   D  RVL+ M E+   ++E       
Sbjct: 207 LFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDE------- 259

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
                      A++L + M++KG  P+   Y  LI+G C   +  EA+ +L EMI+ G  
Sbjct: 260 -----------AIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLK 308

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
               TY++L+ GF   G   +A  I  +M       N + ++ L++G+C+ GK+ +A  +
Sbjct: 309 PEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEI 368

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M+ +G +PD   YS +I G C   ++  A +L +EM   + K  P V TY++++N L
Sbjct: 369 MQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEM--KKRKLAPTVLTYSVIINGL 426

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           C+  N+  +  +L  M+  G  P+ V     +TA                       K  
Sbjct: 427 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHA---------------------KEG 465

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           R      I+E M ++ + P    +  ++   C+ KR++ A
Sbjct: 466 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEA 505



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/352 (22%), Positives = 162/352 (46%), Gaps = 49/352 (13%)

Query: 308 CLKGNLDKAVSLLDRMVASKCM------PNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           C+  N D  +++L  +V  KC       PN V +  +++   K+G  V+   V +  +  
Sbjct: 126 CIIRNSDSPLAVLGSIV--KCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNF 183

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
           +F  +    ++L+  L K  K E   K++  M      P+   Y+ +I   C+VG   +A
Sbjct: 184 EFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDA 243

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           + +L EM   G  A                   +A+E+ + M     V +   Y +LI+G
Sbjct: 244 KRVLLEM---GEKARLL---------------DEAIELKRSMVDKGLVPDLYTYDILING 285

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C + + REA+++  +M+  G KP+ + Y+++I G    G +E+A ++ +EM+      +
Sbjct: 286 FCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVAC--GIE 343

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
            ++  +N LLN +CK   +  +++++  MM++G +PD  T ++ +               
Sbjct: 344 ANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEG------------- 390

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                     + Q  +  F++++ M ++ L+P   T+  ++  LCR   +Q 
Sbjct: 391 --------HCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQG 434


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 152/526 (28%), Positives = 252/526 (47%), Gaps = 44/526 (8%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
           F +  ++L    R   +V+ +    + K    A  V+EA  +    + EF C   V ++N
Sbjct: 110 FAAFGLILKTGWRVNVIVISQ----LLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYN 165

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           +V+N   +EG   +A   YN  +      I PN +T+  VI  +C+  +VD A  +F++M
Sbjct: 166 TVINGFFREGQVEKA---YNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQM 222

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             R  +PD  TY  L+ G     +  E V +L+EM   G  P  +T+ +L++ LCKNG  
Sbjct: 223 IDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRC 282

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A    D+MF KG  P+   Y  L+HG   KG L +  S LD MV +   PN   +  +
Sbjct: 283 REARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIM 342

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
                K     +   +   M ++    +   +  LI  L K G+ +DA+  + QM+ +G 
Sbjct: 343 FCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGV 402

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFE------------------------------- 427
            PN  V+S+L+ GLC VGK ++AEE+ FE                               
Sbjct: 403 TPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQR 462

Query: 428 ----MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
               MI  G   N  +Y++L+ G   +G+  +A ++   M  N    NE  Y++L+ G C
Sbjct: 463 LIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYC 522

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           +  ++ +A  ++ +ML +G  P V  Y++++HGL   G   EA +L+  M  +  +++ D
Sbjct: 523 KARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNM--INSRTKCD 580

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           ++TYNI+LN LCK + +  +  +   +  +    D VT NI + AL
Sbjct: 581 IYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGAL 626



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/549 (25%), Positives = 263/549 (47%), Gaps = 26/549 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKR--TVKSFNSVLNVIIQEG---LYHRALEFYNHIVNAKHMNI 188
           ++EA++LF  ++   HC R  +V++FN +L V+ + G      R +  +  +       +
Sbjct: 30  LDEALKLFDELL---HCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKV 86

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV- 247
            PN  T++++I   CR+G +++    F  +       ++     L+ GLC   R+DEA  
Sbjct: 87  APNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATD 146

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           +LL  M   GC P  V +N +ING  + G++ +A  L   M  +G  PN VTY T+I GL
Sbjct: 147 ILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGL 206

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C    +D+A  +  +M+     P+  TY  +I+G +  G+  +  ++L  M       + 
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ L+  L K G+  +A   +  M  KG KP+  +Y+ L+ G    G   E    L  
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M+ NG + N   ++ +   + +     +A+ I+  M +     + V +  LI  LC+ G+
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + +A + + QM++ G  P++  +SS+++GLC  G  E+A +LF E+  L+     D   +
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEV--LDQGICVDAVFF 444

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFL-- 603
           N L+  LC +  +  +  L++ M+  G  P++++ N  +    L  +++      D +  
Sbjct: 445 NTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS 504

Query: 604 -----NELAIRLF-----KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                NE    +      K +R    + +   ML K ++P  +T+  ++  L +  R   
Sbjct: 505 NGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSE 564

Query: 654 AINKCWSNL 662
           A N+ + N+
Sbjct: 565 A-NELYLNM 572



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 234/481 (48%), Gaps = 6/481 (1%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + T+  LI  Y ++G +K +  +L  M          ++  +     K     EA RLF 
Sbjct: 231 NGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREA-RLFF 289

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             +     K  V  +  +L+    +G       F + +V      + PN   FN++    
Sbjct: 290 DSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGN---GVSPNRRIFNIMFCAY 346

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            +  +++ A+ +F +M  +   PD+ ++  L+D LCK  R+D+AVL  ++M  +G  P  
Sbjct: 347 AKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNI 406

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             F+ L+ GLC  G+  +A +L   +  +G   + V +NTL+  LC +G + +A  L+D 
Sbjct: 407 FVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDL 466

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+     PN ++Y T++ G    GR  + A++L  M       NE+ Y+ L+ G  K  +
Sbjct: 467 MIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARR 526

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +DA  L+++M+ KG  P    Y+ ++ GL + G+  EA E+   MIN+    + +TY+ 
Sbjct: 527 VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNI 586

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G  ++    +A ++++ +   +   + V ++++I  L + G+  +A  ++  + + G
Sbjct: 587 ILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYG 646

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             PDVV Y  +   L   GS+ E   LF+ M   +  + P+    N L+  L  + +IS 
Sbjct: 647 LVPDVVTYRLIAENLIEEGSLGEFDGLFSAM--EKSGTAPNSHMLNALVRRLLHRGDISR 704

Query: 563 S 563
           +
Sbjct: 705 A 705



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 153/327 (46%), Gaps = 8/327 (2%)

Query: 122 IFIFKA--YGKAHLV--EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           IF+F +  YG   +   E+A  LF  ++D+  C   V  FN+++  +  EG   R +E  
Sbjct: 406 IFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAV-FFNTLMCNLCNEG---RVMEAQ 461

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
             I     + + PN +++N ++   C  G +D A +L   M     +P+ +TY  L+ G 
Sbjct: 462 RLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGY 521

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CK  R+D+A  L  EM + G  P   T+N +++GL + G    A +L  NM       + 
Sbjct: 522 CKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDI 581

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
            TYN +++GLC    +D+A  +  R+ +     + VT+  +I  L+K GR  D   +  +
Sbjct: 582 YTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFAT 641

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           +       +   Y  +   L +EG   +   L+  M + G  PN+ + +AL+  L   G 
Sbjct: 642 ISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGD 701

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLM 444
              A   L+++     +  A T S L+
Sbjct: 702 ISRAGVYLYKLDEKNFSLEASTTSMLI 728



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 120/294 (40%), Gaps = 48/294 (16%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA RL   M+     +  V S+N+++      G    A +  + +V+     + PN  
Sbjct: 457 VMEAQRLIDLMI-RVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSN---GLKPNEF 512

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP---------------------------- 225
           T+ ++++  C+   VD+A  LFREM ++   P                            
Sbjct: 513 TYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNM 572

Query: 226 -------DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP----VTFNVLINGLCK 274
                  DIYTY  +++GLCK N +DEA  +   +    C   P    VTFN++I  L K
Sbjct: 573 INSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRL----CSKDPQLDSVTFNIMIGALLK 628

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G    A  L   +   G +P+ VTY  +   L  +G+L +   L   M  S   PN   
Sbjct: 629 GGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHM 688

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
              ++  L+  G        L  ++E+ F +     S LIS L+  G+ +   K
Sbjct: 689 LNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLIS-LYSRGEYQPHAK 741


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 154/570 (27%), Positives = 273/570 (47%), Gaps = 31/570 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF ++I+   N G  +  E+++  +          ++  +   + K   ++ A  +F  M
Sbjct: 204 TFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRM 263

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +  C     ++++++N +  EG    A++    +++     I P    + + I ++C 
Sbjct: 264 VKD-GCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDK---GIEPTVHAYTIPIVSLCD 319

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G    A++L  +M  R C P++ TY  L+ GL ++ + + A+ +  +M  DG  PT VT
Sbjct: 320 AGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVT 379

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LIN L   G    A  + + M     LPN  TYN +I G C  G + KA ++ D+M+
Sbjct: 380 YSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML 439

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +   PN +TY  II+   K G   +  R+L  M+     ++ + Y+ LISG  + GK E
Sbjct: 440 KAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLE 499

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A  L+ +M+E G  PN V Y+A+I+G   V K D+A  + ++M+ +G   ++ TY+ ++
Sbjct: 500 HAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMI 559

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            GF ++ +  +A      M K   + N + Y+  I GLC++G+   A  ++ +M  R   
Sbjct: 560 SGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYF 619

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P++  YSS+I GLC  G  E+A +L      L+   +P+V TY  L+  LC +     + 
Sbjct: 620 PNLCTYSSLIDGLCQEGQAEDAERL------LDDGCEPNVDTYTTLVRGLCGKGRCYEAD 673

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
            L+ SM  +G  P        L    + LE          E A+++F    T+G      
Sbjct: 674 QLVESMKKKGLQPSEEIYRALLVGQCKNLEV---------ESALKIFDSMVTTG------ 718

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   P  S ++ ++  LC+    Q A
Sbjct: 719 ------FQPCLSDYKALICALCKANFRQKA 742



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 162/604 (26%), Positives = 272/604 (45%), Gaps = 51/604 (8%)

Query: 98  DFKSLEMVLYRMRREKRVVLEKSF-IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKS 156
           D      +L R+ R++  V   +  I + K+      V+  I++   +   +    T+ S
Sbjct: 110 DMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYDFGYTLYS 169

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F+++L  + +  +     + Y  ++N+    I PN  TFN +IK +C  G V  A  +  
Sbjct: 170 FSTLLIQLGKFDMDGLGRDVYIEMLNS---GIRPNLFTFNAMIKILCNKGKVQEAELIMG 226

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            +      PD +TY +L+ G CK   LD A  + D M  DGC P  VT++ LINGLC  G
Sbjct: 227 HIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEG 286

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L  A  +++ M  KG  P    Y   I  LC  G   +AV LL +M    C PN  TY 
Sbjct: 287 RLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYT 346

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +I+GL + G+      V   M           YS LI+ L+ EG+ E A+ +++ M+  
Sbjct: 347 ALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSH 406

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
              PNT  Y+ +I G C +G   +A  I  +M+  G + N  TY+ ++  +F+ G  + A
Sbjct: 407 DSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNA 466

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + + + M  N    +   Y+ LI G    GKL  A  ++ +M+  G  P+VV Y+++I+G
Sbjct: 467 MRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIING 526

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
                 V++AL LF +M+  E  + P   TYN++++   K + IS + +    M+ +G  
Sbjct: 527 YLTVAKVDDALALFWKMV--ESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLL 584

Query: 577 PDLVTCNIFLTAL----------------KEKLEAP-------------QDG-------- 599
           P+++T   F+  L                K++   P             Q+G        
Sbjct: 585 PNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERL 644

Query: 600 --------TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                    D    L   L  + R     ++VE M +K L P    +  ++   C+   +
Sbjct: 645 LDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEV 704

Query: 652 QAAI 655
           ++A+
Sbjct: 705 ESAL 708



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 254/556 (45%), Gaps = 40/556 (7%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ--------------------EGLYHRA 173
            E  +R FH +      K  +  F S+LN +++                    EG   R 
Sbjct: 91  TESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRV 150

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
           ++  + I             +F+ ++  + +  +      ++ EM      P+++T+  +
Sbjct: 151 IQVLSEINTTYDFGY--TLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAM 208

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +  LC + ++ EA L++  +   G  P   T+  LI G CKNG L  A ++ D M   GC
Sbjct: 209 IKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGC 268

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            PN VTY+ LI+GLC +G L++A+ +L+ M+     P    Y   I  L   GR+ +  +
Sbjct: 269 DPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVK 328

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +L  M++R    N   Y+ LISGL ++GK E A+ ++ +M+  G  P  V YSALI+ L 
Sbjct: 329 LLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLY 388

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
             G+ + A  I   M+++    N  TY+ ++KGF   G   KA  I+  M K     N +
Sbjct: 389 VEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVI 448

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y+++IH   + G +  A  +   M   G K D   Y+++I G    G +E A  LFNEM
Sbjct: 449 TYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEM 508

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             +E    P+V TYN ++N     + +  ++ L   M++ G  P   T N+ ++    K 
Sbjct: 509 --VEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGF-SKT 565

Query: 594 EAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
               +  +F  ++  +               L K  RTS  FKI   M ++   P   T+
Sbjct: 566 NRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTY 625

Query: 639 ERVVQELCRPKRIQAA 654
             ++  LC+  + + A
Sbjct: 626 SSLIDGLCQEGQAEDA 641



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 244/466 (52%), Gaps = 13/466 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E AI ++H M+ +      V ++++++N +  EG +  AL  +  +++    + LPNT T
Sbjct: 359 EVAIGVYHKMLADGLVPTAV-TYSALINQLYVEGRFETALTIFEWMLSH---DSLPNTET 414

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N++IK  C +G +  A  +F +M      P++ TY  ++    K+  ++ A+ LL+ M+
Sbjct: 415 YNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMK 474

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +G      T+  LI+G  + G+L  A  L + M   G  PN VTYN +I+G      +D
Sbjct: 475 GNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVD 534

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A++L  +MV S  +P+  TY  +I+G  K  R  +       M ++    N   Y++ I
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            GL K G+   A K++ +M ++   PN   YS+LIDGLC+ G+ ++AE +L    ++GC 
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLL----DDGCE 650

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  TY++L++G    G+ ++A ++ + M K     +E  Y  L+ G C++ ++  A  +
Sbjct: 651 PNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKI 710

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           +  M++ G +P +  Y ++I  LC A   ++A  +F  M  L+     D   + +LL+ L
Sbjct: 711 FDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTM--LKKHWNSDEVVWTVLLDGL 768

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIF---LTALKEKLEAPQ 597
            K+     S++LL+ M  R C  +  T  +    L+AL   +E PQ
Sbjct: 769 LKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQ 814



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 205/450 (45%), Gaps = 35/450 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI   +  G F+    V ++M  +  V    ++  +          E A+ +F  M
Sbjct: 344 TYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWM 403

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +       T +++N ++      G   +A   ++ ++ A      PN +T+N++I    +
Sbjct: 404 LSHDSLPNT-ETYNVIIKGFCSIGYIQKATAIFDQMLKAGPS---PNVITYNIIIHIYFK 459

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++NA++L   M     + D +TY  L+ G  +  +L+ A  L +EM   G  P  VT
Sbjct: 460 QGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVT 519

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N +ING     ++  A  L   M   G +P+  TYN +I G      + +A +   +MV
Sbjct: 520 YNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMV 579

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +PN +TY + I+GL K GR     ++   M++R +  N   YS+LI GL +EG+AE
Sbjct: 580 KQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAE 639

Query: 385 DAMKLW-------------------------------KQMMEKGCKPNTVVYSALIDGLC 413
           DA +L                                + M +KG +P+  +Y AL+ G C
Sbjct: 640 DAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQC 699

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           +  + + A +I   M+  G       Y +L+    ++    KA  +++ M K +   +EV
Sbjct: 700 KNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEV 759

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
            ++VL+ GL ++G+   +  +   M SR C
Sbjct: 760 VWTVLLDGLLKEGETDLSLELLHVMESRNC 789



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 179/387 (46%), Gaps = 8/387 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I+ + + G  +    +  +M +        ++  I   Y K   +  A+RL   M
Sbjct: 414 TYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMM 473

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                 K    ++ ++++   + G    A   +N +V      I PN +T+N +I     
Sbjct: 474 KGN-GLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEH---GISPNVVTYNAIINGYLT 529

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +  VD+A+ LF +M      P   TY  ++ G  K NR+ EA     +M   G  P  +T
Sbjct: 530 VAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVIT 589

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +   I+GLCKNG    A K+   M  +   PN  TY++LI GLC +G  + A  LLD   
Sbjct: 590 YTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD--- 646

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C PN  TY T++ GL   GR  +  +++ SM+++    +E IY  L+ G  K  + E
Sbjct: 647 -DGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVE 705

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+K++  M+  G +P    Y ALI  LC+     +A+ +   M+     ++   ++ L+
Sbjct: 706 SALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLL 765

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYN 471
            G  + G+   ++E+   M   NC  N
Sbjct: 766 DGLLKEGETDLSLELLHVMESRNCTLN 792



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 161/345 (46%), Gaps = 8/345 (2%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           +L   T+ +LI  ++  G  +    +   M          ++  I   Y     V++A+ 
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALA 538

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           LF  MV+  +   +  ++N +++   +      A  F   +V      +LPN +T+   I
Sbjct: 539 LFWKMVESGNVPSS-GTYNMMISGFSKTNRISEAENFCGKMVKQ---GLLPNVITYTSFI 594

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C+ G    A ++F EM  R+  P++ TY +L+DGLC+E + ++A  LLD    DGC 
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLD----DGCE 650

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   T+  L+ GLC  G    A +LV++M  KG  P+E  Y  L+ G C    ++ A+ +
Sbjct: 651 PNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKI 710

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            D MV +   P    Y  +I  L K         +  +M ++ ++ +E +++ L+ GL K
Sbjct: 711 FDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLK 770

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           EG+ + +++L   M  + C  N      L   L  +G   E  +I
Sbjct: 771 EGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQI 815


>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
          Length = 477

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/442 (31%), Positives = 240/442 (54%), Gaps = 16/442 (3%)

Query: 69  IFNSTPK--LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK 126
           IF+S        ++    TF  +I    ++  F+  E +L RM+ EK  + E  F+ I +
Sbjct: 34  IFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICR 93

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           AYG+ H   +A+R+F  M  E+ C+ + KS+ +V  +++ E     AL FY ++   + M
Sbjct: 94  AYGRVHKPLDAVRVFRKM-KEYECEPSQKSYITVFAILVGENQLKLALRFYRYM---REM 149

Query: 187 NILPNTLTFNLVIKTVCR-LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
            I P+  + N++IK +C+  G +D A+++FREMP R C P  YTY TL+ GLC+  ++ E
Sbjct: 150 GIPPSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGE 209

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  L  EM+   C PT VT+  LI+GLC++ +L  A +L++ M  KG  PN  TY++L+ 
Sbjct: 210 AKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMD 269

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C  G   +A+ LLD MV+ + +PN +TY T+++GL K G+  +   +L  M+ +    
Sbjct: 270 GHCKSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRP 329

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS-------ALIDGLCRVGKP 418
           +  +Y  +ISG     K  +A     +M+  G  PN + +S        ++ GLC    P
Sbjct: 330 DAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLC-TEHP 388

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           + A ++   M   G + +A T+ SL+  F   G  HKA  +  +M  + C+ +E  ++ +
Sbjct: 389 NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAV 448

Query: 479 IHGLCEDGKLRE-ARMVWTQML 499
           +    +  K+RE A +V  +++
Sbjct: 449 VCAFWDRRKVRESAELVQVELM 470



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/404 (28%), Positives = 177/404 (43%), Gaps = 40/404 (9%)

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           T+  ++  L   N    A  LL  M+ + C  T   F  +     +  +   A ++   M
Sbjct: 52  TFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLDAVRVFRKM 111

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
               C P++ +Y T+   L  +  L  A+     M      P+  +   +I  L K    
Sbjct: 112 KEYECEPSQKSYITVFAILVGENQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGT 171

Query: 349 VDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           +D A R+   M  R    + Y Y TLI GL + GK  +A +L+K+M  K C P  V Y +
Sbjct: 172 MDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXS 231

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI GLC+    D A  +L EM + G   N FTYSSLM G  +SG   +A+E+   M    
Sbjct: 232 LIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSRR 291

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            + N + YS L+HGLC++GKL+EA  +  +M  +G +PD   Y  +I G C+     EA 
Sbjct: 292 HLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAA 351

Query: 528 KLFNEM-------------------------LCLEPKSQP--------------DVFTYN 548
              +EM                         LC E  ++               D  T++
Sbjct: 352 NFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTEHPNRAFQLYLSMRTRGISIDAKTFD 411

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            L+N  C + ++  +  L++ M+  GC PD  T N  + A  ++
Sbjct: 412 SLVNYFCNKGDLHKAAHLVDEMVLDGCIPDEXTWNAVVCAFWDR 455


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 157/490 (32%), Positives = 253/490 (51%), Gaps = 14/490 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF  +I      GD      +L RM+       VV   S I     YGK   +EE  +L 
Sbjct: 196 TFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLI---DGYGKCGELEEVEKLV 252

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M     C+  V ++N+++N   + G   RA   Y++    K   ++ N +TF+  +  
Sbjct: 253 GEM-RGCGCRPDVVTYNALVNCFCKFGRMERA---YSYFAEMKREGVMANVVTFSTFVDA 308

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+ G+V  A++LF +M ++  +P+  TY  L+DG CK  RLD+A++L +EM   G    
Sbjct: 309 FCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLN 368

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+ VL++GLCK G++  A  +   M   G   NE+ Y TLIHG  +  N ++A+SLL 
Sbjct: 369 VVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLS 428

Query: 322 RMVASKCMPNEVT-YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            M   K M  +V+ YG +I GL  L +  +   +L  M+E     N  IY+ ++   FK 
Sbjct: 429 EM-KDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKA 487

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            K  +A+ L ++MM+ G +PN V Y AL+DGLC+ G  DEA     +M++ G   N   Y
Sbjct: 488 RKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAY 547

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++L+ G  ++G+  KAV +  +M       + V  + L+ G  + G L++A  +  +M++
Sbjct: 548 TALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMIN 607

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G + D+  Y+  + G CN   ++EA ++ +EM  +E    PD   YN L+N   K  N+
Sbjct: 608 SGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEM--IENGITPDAVVYNCLINKCQKLGNM 665

Query: 561 SHSIDLLNSM 570
             +  L N M
Sbjct: 666 EEAAILQNEM 675



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/503 (30%), Positives = 246/503 (48%), Gaps = 10/503 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           S   +L+   A+ G      + L R+R  +     ++   I     +    E A RLF  
Sbjct: 129 SVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQ 188

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           +         V +FN +++ + +EG    A      +   K +   P+ +T+N +I    
Sbjct: 189 LP-----APNVFTFNIMIDFLCKEGDLAEARAL---LARMKAIGCSPDVVTYNSLIDGYG 240

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G ++   +L  EM    C PD+ TY  L++  CK  R++ A     EM+ +G     V
Sbjct: 241 KCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVV 300

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           TF+  ++  CKNG +  A KL   M +KG  PNEVTY  L+ G C  G LD A+ L + M
Sbjct: 301 TFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEM 360

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V      N VTY  +++GL K G+  +   V   ME      NE +Y+TLI G F    +
Sbjct: 361 VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS 420

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E A+ L  +M +KG + +  +Y ALI GLC + K DEA+ +L +M   G   N   Y+++
Sbjct: 421 ERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNI 480

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           M   F++ K  +A+ + + M  +    N V Y  L+ GLC+ G + EA   + +M+  G 
Sbjct: 481 MDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGL 540

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +P+V AY++++ GLC  G +++A+ L +EM  ++     D      L++   KQ N+  +
Sbjct: 541 EPNVQAYTALVDGLCKNGRLDKAVLLLDEM--IDKGMSLDNVVCTSLMDGHLKQGNLQDA 598

Query: 564 IDLLNSMMDRGCDPDLVTCNIFL 586
             L   M++ G   DL     F+
Sbjct: 599 FALKAKMINSGLQLDLYGYTCFV 621



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 208/455 (45%), Gaps = 47/455 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ SLI  Y   G+ + +E ++  MR       VV   + +  F  +G+   +E A   F
Sbjct: 231 TYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGR---MERAYSYF 287

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  E      V +F++ ++   + G+   A++ +  +   +   + PN +T+  ++  
Sbjct: 288 AEMKRE-GVMANVVTFSTFVDAFCKNGMVREAMKLFAQM---RMKGMKPNEVTYTCLVDG 343

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA--------------- 246
            C+ G +D+A+ L  EM  +    ++ TY  L+DGLCKE ++ EA               
Sbjct: 344 TCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRAN 403

Query: 247 --------------------VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
                               + LL EM+  G       +  LI GLC   +L  A  L++
Sbjct: 404 ELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLN 463

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLD-KAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
            M   G  PN V Y  ++   C K   + +A++LL +M+ S   PN VTY  +++GL K 
Sbjct: 464 KMDECGLKPNNVIYTNIMDA-CFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKA 522

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           G   +       M +     N   Y+ L+ GL K G+ + A+ L  +M++KG   + VV 
Sbjct: 523 GSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVC 582

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           ++L+DG  + G   +A  +  +MIN+G   + + Y+  + GF       +A E+  +M +
Sbjct: 583 TSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIE 642

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           N    + V Y+ LI+   + G + EA ++  +M S
Sbjct: 643 NGITPDAVVYNCLINKCQKLGNMEEAAILQNEMES 677



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 193/415 (46%), Gaps = 57/415 (13%)

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +  LP+ V  +TL+  L  +G LD AV  L R+   +  PN  T   I+  L +   +  
Sbjct: 124 RSALPSVV--DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSEL 181

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
             R+     E+    N + ++ +I  L KEG   +A  L  +M   GC P+ V Y++LID
Sbjct: 182 AWRLF----EQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLID 237

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G  + G+ +E E+++ EM   GC  +  TY++L+  F + G+  +A   + +M +   + 
Sbjct: 238 GYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMA 297

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N V +S  +   C++G +REA  ++ QM  +G KP+ V Y+ ++ G C AG +++AL L 
Sbjct: 298 NVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLT 357

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID------------------------- 565
           NEM  ++     +V TY +L++ LCK+  ++ + D                         
Sbjct: 358 NEM--VQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHF 415

Query: 566 ----------LLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIR---- 609
                     LL+ M D+G + D+      +  L   +KL+  +   + ++E  ++    
Sbjct: 416 VYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNV 475

Query: 610 --------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                    FK ++ S    +++ M+     P   T+  +V  LC+   I  AI+
Sbjct: 476 IYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAIS 530


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 260/535 (48%), Gaps = 39/535 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL-EKSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+  LI+ Y         E VL  M+ E  +V  E+++  +   Y +   +++A+RL   
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+     K  +   NS++N   + G  H A      +V+    N+ P++ ++N ++   C
Sbjct: 324 ML-RLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVD---WNLKPDSYSYNTLLDGYC 379

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G    A  L  +M     EP + TY TL+ GLC+    D+A+ +   M   G  P  V
Sbjct: 380 REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEV 439

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            ++ L++GL K      A+ L  ++  +G   + +T+NT+I GLC  G + +A  + D+M
Sbjct: 440 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 499

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
               C P+ +TY T+I+G  K        +V  +ME      +  +Y++LISGLFK  + 
Sbjct: 500 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 559

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +   L  +M  +G  PN V Y ALIDG C+ G  D+A    FEM  NG +AN    S++
Sbjct: 560 VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 619

Query: 444 MKGFFESGK----------------------------GHKAVEIWKDMAKNNC----VYN 471
           + G +  G+                             + A++   D    +C    + N
Sbjct: 620 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPN 679

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + Y++ I GLC+ GK+ +AR  ++ +  +G  PD   Y ++IHG   AG+V+EA +L +
Sbjct: 680 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRD 739

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           EM  L     P++ TYN L+N LCK  N+  +  L + +  +G  P++VT N  +
Sbjct: 740 EM--LRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLI 792



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 225/446 (50%), Gaps = 22/446 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           VE  I  +H++++ +     V++   VL  + ++G+                     N +
Sbjct: 223 VEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSR-------------------NVV 263

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           T+ L+IK  C+   +D A ++ R M       PD   Y  L+DG C+  ++D+AV LLDE
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   G        N LING CK GE+  A  ++  M      P+  +YNTL+ G C +G+
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
             +A +L D+M+     P  +TY T++ GL ++G   D  ++   M +R    +E  YST
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ GLFK    E A  LWK ++ +G   + + ++ +I GLC++GK  EAEEI  +M + G
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C+ +  TY +L+ G+ ++    +A ++   M +     +   Y+ LI GL +  +L E  
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 563

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            + T+M  RG  P++V Y ++I G C  G +++A   + EM   E     ++   + +++
Sbjct: 564 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM--TENGLSANIIICSTMVS 621

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPD 578
            L +   I  +  L+  M+D G  PD
Sbjct: 622 GLYRLGRIDEANLLMQKMVDHGFFPD 647



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 236/531 (44%), Gaps = 38/531 (7%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           ++  F  +  + + +  VKS+  +++++ +  +Y     + N +V+        N +   
Sbjct: 51  SLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIW-- 108

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
                       D  + ++RE        D+     +  GL K      A+ + D M   
Sbjct: 109 ------------DELVGVYREFAFSPTVFDMILKVYVEKGLTKN-----ALYVFDNMGKC 151

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P+  + N L+N L KNGE   A  +   M   G +P+    + +++  C  G +D+A
Sbjct: 152 GRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEA 211

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
              + +M      PN VTY ++ING V LG       VL  M E+    N   Y+ LI G
Sbjct: 212 AGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKG 271

Query: 377 LFKEGKAEDAMKLWKQMMEKGC-KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
             K+ K ++A K+ + M E+    P+   Y  LIDG CR GK D+A  +L EM+  G   
Sbjct: 272 YCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKT 331

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N F  +SL+ G+ + G+ H+A  +   M   N   +   Y+ L+ G C +G   EA  + 
Sbjct: 332 NLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLC 391

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +ML  G +P V+ Y++++ GLC  G+ ++AL++++ M  ++    PD   Y+ LL+ L 
Sbjct: 392 DKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLM--MKRGVAPDEVGYSTLLDGLF 449

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---------------KEKLEAPQDGT 600
           K  N   +  L   ++ RG     +T N  ++ L                + L    DG 
Sbjct: 450 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 509

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
            +   L     K       FK+   M ++ +SP    +  ++  L + +R+
Sbjct: 510 TY-RTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 559



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 216/486 (44%), Gaps = 69/486 (14%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SLI  Y   G+    E V+ RM          S+  +   Y +     EA  L   M+ E
Sbjct: 338 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 397

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM--------------------- 186
              + TV ++N++L  + + G +  AL+ + H++  + +                     
Sbjct: 398 -GIEPTVLTYNTLLKGLCRVGAFDDALQIW-HLMMKRGVAPDEVGYSTLLDGLFKMENFE 455

Query: 187 -------NILP-----NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
                  +IL      + +TFN +I  +C++G +  A ++F +M    C PD  TY TL+
Sbjct: 456 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 515

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           DG CK + + +A  +   M+ +   P+   +N LI+GL K+  L     L+  M ++G  
Sbjct: 516 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 575

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN VTY  LI G C +G LDKA S    M  +    N +   T+++GL +LGR +D A +
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGR-IDEANL 634

Query: 355 LM------------------------------SMEE--RKFHV-NEYIYSTLISGLFKEG 381
           LM                              S++E  + F + N  +Y+  I+GL K G
Sbjct: 635 LMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTG 694

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K +DA + +  +  KG  P+   Y  LI G    G  DEA  +  EM+  G   N  TY+
Sbjct: 695 KVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYN 754

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ G  +S    +A  ++  + +     N V Y+ LI G C+ G +  A  +  +M+  
Sbjct: 755 ALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEE 814

Query: 502 GCKPDV 507
           G  P +
Sbjct: 815 GISPSI 820



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 156/349 (44%), Gaps = 36/349 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF ++I      G     E +  +M+         ++  +   Y KA  V +A ++   M
Sbjct: 475 TFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 534

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E     +++ +NS+++ + +     R +E  + +       + PN +T+  +I   C+
Sbjct: 535 ERE-PISPSIEMYNSLISGLFKS---RRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCK 590

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG------C 258
            G++D A   + EM       +I    T++ GL +  R+DEA LL+ +M   G      C
Sbjct: 591 EGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHEC 650

Query: 259 F--------------------------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           F                          P  + +N+ I GLCK G++  A +    + LKG
Sbjct: 651 FLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKG 710

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +P+  TY TLIHG    GN+D+A  L D M+    +PN VTY  +INGL K        
Sbjct: 711 FVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQ 770

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           R+   + ++    N   Y+TLI G  K G  + A KL  +M+E+G  P+
Sbjct: 771 RLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPS 819


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 148/496 (29%), Positives = 253/496 (51%), Gaps = 10/496 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK--SFIFIFKAYGKAHLVEEAIRLFH 142
           T   ++  Y  S +F   + V+  M  EKR V     +   +  A  +A  V+ AI L  
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEM--EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVD 216

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +M ++   K  + +FNSVL  + +   + +A E +  +      ++ P+  +FN++I   
Sbjct: 217 SMANK-GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM---DQCSVAPDVRSFNILIGGF 272

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CR+G V+ A++ ++EM  R   PD+ ++  L+       ++D A   L EM+  G  P  
Sbjct: 273 CRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDG 332

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V + ++I G C+ G +  A ++ D M   GCLP+ VTYNTL++GLC +  L  A  LL+ 
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNE 392

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M      P+  T+ T+I+G  + G      ++  ++  ++   +   Y++LI G+ ++G 
Sbjct: 393 MKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGD 452

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A +LW  M  +   PN V YS LID  C  G+ +EA   L EM++ G   N  TY+S
Sbjct: 453 LAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNS 512

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++KG+  SG   K  +  + M ++N + + + ++ LIHG  ++  +  A  V+  M    
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            +PD V Y+ +I+G    G++EEA ++F +M       +PD +TY  L+N      N   
Sbjct: 573 VQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGA--SGIEPDRYTYMSLINGHVTAGNSKE 630

Query: 563 SIDLLNSMMDRGCDPD 578
           +  L + MM RG  PD
Sbjct: 631 AFQLHDEMMHRGFAPD 646



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 239/493 (48%), Gaps = 24/493 (4%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN- 187
           G  HL EEA RL  +   E +           LN+++    Y ++LEF         M  
Sbjct: 136 GWPHLAEEAYRLVLSSDSEVNA--------YTLNIMVHS--YCKSLEFDKADTVISEMEK 185

Query: 188 --ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             + P+ +T N++I    R G VD AI L   M  +  +P I T+ +++ GLCK  R D+
Sbjct: 186 RCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDK 245

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  +   M      P   +FN+LI G C+ GE+  A K    M  +G  P+ V+++ LI 
Sbjct: 246 AKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIG 305

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
               +G +D A + L  M     +P+ V Y  +I G  + G   +  RV   M       
Sbjct: 306 LFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLP 365

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   Y+TL++GL K+ +  DA +L  +M E+G  P+   ++ LI G CR G  ++A ++ 
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             +++     +   Y+SL+ G    G   KA E+W DM       N V YS+LI   CE 
Sbjct: 426 DTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEK 485

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G++ EA     +M+S+G  P+++ Y+S+I G C +G+V++  +   +M+  +    PD+ 
Sbjct: 486 GQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMM--QDNILPDLI 543

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           T+N L++   K+ N+  + ++ N M      PD VT N+ +    E+    + G      
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAG------ 597

Query: 606 LAIRLFKRQRTSG 618
              R+FK+   SG
Sbjct: 598 ---RVFKKMGASG 607



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 220/428 (51%), Gaps = 5/428 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V + N +++   + G    A+   + + N     + P  +TFN V+K +C+    D A +
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANK---GLKPGIVTFNSVLKGLCKHRRFDKAKE 248

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +FR M   +  PD+ ++  L+ G C+   ++EA+    EMQ  G  P  V+F+ LI    
Sbjct: 249 VFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFS 308

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G++  AA  +  M   G +P+ V Y  +I G C  G++ +A+ + D MV   C+P+ V
Sbjct: 309 TRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVV 368

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T++NGL K  R +D   +L  M+ER    +   ++TLI G  ++G  E A++L+  +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL 428

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + +  +P+ V Y++LIDG+CR G   +A E+  +M       N  TYS L+    E G+ 
Sbjct: 429 LHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQV 488

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A     +M     + N + Y+ +I G C  G +++ +    +M+     PD++ ++++
Sbjct: 489 EEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTL 548

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           IHG     ++  A  +FN M   +   QPD  TYN+++N   +Q N+  +  +   M   
Sbjct: 549 IHGYIKEENMHGAFNVFNIM--EKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS 606

Query: 574 GCDPDLVT 581
           G +PD  T
Sbjct: 607 GIEPDRYT 614



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/534 (25%), Positives = 242/534 (45%), Gaps = 27/534 (5%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  + + Y ++    EA   F  ++D         + N++L  + + G  H A E Y  +
Sbjct: 90  FDLLIRTYTQSRKPREAFEAFRLLLDH-RVPVPASASNALLAALSRAGWPHLAEEAYRLV 148

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           +++   +   N  T N+++ + C+    D A  +  EM  R   PD+ T+  L+D   + 
Sbjct: 149 LSS---DSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRA 205

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             +D A+ L+D M   G  P  VTFN ++ GLCK+    +A ++   M      P+  ++
Sbjct: 206 GDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSF 265

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N LI G C  G +++A+     M      P+ V++  +I      G+    A  L  M+ 
Sbjct: 266 NILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKG 325

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                +  IY+ +I G  + G   +A+++  +M+  GC P+ V Y+ L++GLC+  +  +
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLD 385

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           AEE+L EM   G   +  T+++L+ G+   G   KA++++  +       + V Y+ LI 
Sbjct: 386 AEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLID 445

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G+C  G L +A  +W  M +R   P+ V YS +I   C  G VEEA    +EM  +   +
Sbjct: 446 GMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEM--VSKGN 503

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P++ TYN ++   C+  N+      L  MM     PDL+T N  +              
Sbjct: 504 LPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHG------------ 551

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      K +   G F +  +M ++ + P   T+  ++        ++ A
Sbjct: 552 ---------YIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEA 596



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 223/453 (49%), Gaps = 39/453 (8%)

Query: 82  GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           G  TF S+++       F   + V   M +       +SF  +   + +   VEEA++ +
Sbjct: 226 GIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFY 285

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  +      V SF+ ++ +    G    A  +   +   K + ++P+ + + +VI  
Sbjct: 286 KEM-QQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM---KGLGLVPDGVIYTMVIGG 341

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            CR G +  A+++  EM    C PD+ TY TL++GLCK++RL +A  LL+EM+  G  P 
Sbjct: 342 FCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPD 401

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             TF  LI+G C++G   +A +L D +  +   P+ V YN+LI G+C KG+L KA  L D
Sbjct: 402 LCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWD 461

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M A +  PN VT                                   YS LI    ++G
Sbjct: 462 DMHAREIFPNHVT-----------------------------------YSILIDSHCEKG 486

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + E+A     +M+ KG  PN + Y+++I G CR G   + ++ L +M+ +    +  T++
Sbjct: 487 QVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFN 546

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ G+ +    H A  ++  M K     + V Y+++I+G  E G + EA  V+ +M + 
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGAS 606

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           G +PD   Y S+I+G   AG+ +EA +L +EM+
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMM 639



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 16/254 (6%)

Query: 85  TFYSLIQHYANSGDF-KSLEM--VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF +LI  Y   G+F K+L++   L   R    VV   S I      G      E     
Sbjct: 404 TFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE----- 458

Query: 142 HTMVDEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
             + D+ H +       +++ +++   ++G    A  F + +V+  +   LPN +T+N +
Sbjct: 459 --LWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGN---LPNIMTYNSI 513

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           IK  CR G V    Q  ++M   N  PD+ T+ TL+ G  KE  +  A  + + M+ +  
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  VT+N++ING  + G +  A ++   M   G  P+  TY +LI+G    GN  +A  
Sbjct: 574 QPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQ 633

Query: 319 LLDRMVASKCMPNE 332
           L D M+     P++
Sbjct: 634 LHDEMMHRGFAPDD 647



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 138/330 (41%), Gaps = 53/330 (16%)

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           AE+A +L   ++    + N    + ++   C+  + D+A+ ++ EM       +  T++ 
Sbjct: 141 AEEAYRL---VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNV 197

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+   F +G    A+ +   MA        V ++ ++ GLC+  +  +A+ V+  M    
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEML------------CL-------------- 536
             PDV +++ +I G C  G VEEA+K + EM             CL              
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAA 317

Query: 537 ----EPKS---QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
               E K     PD   Y +++   C+  ++S ++ + + M+  GC PD+VT N  L  L
Sbjct: 318 AYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGL 377

Query: 590 KEKLEAPQDGTDFLNELAIR-----------LFKRQRTSGGF----KIVEVMLQKFLSPQ 634
             K     D  + LNE+  R           L       G F    ++ + +L + L P 
Sbjct: 378 C-KQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436

Query: 635 TSTWERVVQELCRPKRIQAAINKCWSNLYG 664
              +  ++  +CR   +  A N+ W +++ 
Sbjct: 437 VVAYNSLIDGMCRKGDLAKA-NELWDDMHA 465



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 46/235 (19%), Positives = 99/235 (42%), Gaps = 27/235 (11%)

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           EI+  ++ +        +  L++ + +S K  +A E ++ +  +         + L+  L
Sbjct: 73  EIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAAL 132

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCLEPKS 540
              G    A   +  +LS   + +    + M+H  C +   ++A  + +EM   C+    
Sbjct: 133 SRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCV---- 188

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            PDV T+N+L++A  +  ++  +I L++SM ++G  P +VT N  L              
Sbjct: 189 FPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKG------------ 236

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                    L K +R     ++   M Q  ++P   ++  ++   CR   ++ A+
Sbjct: 237 ---------LCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAM 282


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 146/485 (30%), Positives = 250/485 (51%), Gaps = 21/485 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  + + +  A  +E  +R F  M +   C   V ++N+V+    +     R  E +  
Sbjct: 205 SYNILIRGFCAAGNLEMGLRFFEEM-ERNRCLPNVVTYNTVIGAYCK---LKRIDEAFKL 260

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + +     + PN LT+N+VI  +CR+G ++    +  EM  +   PD  TY TL++G CK
Sbjct: 261 LRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCK 320

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
                +A++L  EM  +G  P  VT+  LIN +CK G L RA +  D M ++G  PN VT
Sbjct: 321 VGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVT 380

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y +LI+G   KG +D+A  + D M+ S   P  VTY  ++NG    GR  +   +L  ME
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME 440

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    +   YST+I+G  +  + + A ++  +M+EKG  P+ + YS+LI GLC   + +
Sbjct: 441 GKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLN 500

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA ++  EM+N     + FTY+SL+ G+ + G  ++A+ +  +M K   + + V Y+VLI
Sbjct: 501 EACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLI 560

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH---------------GLCNAGSVE 524
           +GL +  + REA+ +  ++      P+ + Y ++I                G C  G + 
Sbjct: 561 NGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMN 620

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA ++F  M+  +   +P+   YN++++  C+  N+  +  L   M+D G  P  VT   
Sbjct: 621 EADQVFESMI--KRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIA 678

Query: 585 FLTAL 589
            + AL
Sbjct: 679 LVKAL 683



 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 139/466 (29%), Positives = 246/466 (52%), Gaps = 12/466 (2%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  ++N++I+  C  G ++  ++ F EM    C P++ TY T++   CK  R+DEA  LL
Sbjct: 202 NVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLL 261

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             M ++G  P  +T+N++INGLC+ G +   + ++  M  KG  P+ VTYNTL++G C  
Sbjct: 262 RSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKV 321

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           GN  +A+ L   M+ +   P+ VTY ++IN + K G           M  R    N   Y
Sbjct: 322 GNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTY 381

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           ++LI+G  ++G  ++A ++W +M+  G  P  V Y+AL++G C  G+ +EA  +L  M  
Sbjct: 382 TSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEG 441

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G + +  +YS+++ GF    +  +A ++  +M +     + + YS LI GLCE  +L E
Sbjct: 442 KGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNE 501

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++ +ML++   PD   Y+S+I+G C  G + EAL L +EM  ++    PD  TYN+L
Sbjct: 502 ACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEM--IKKGFLPDTVTYNVL 559

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA-IR 609
           +N L KQ+    +  LL  +      P+ +T +  + +  +         +F + +A I+
Sbjct: 560 INGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSD--------IEFKSVVALIK 611

Query: 610 LF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            F  +   +   ++ E M+++   P  + +  ++   CR   +  A
Sbjct: 612 GFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKA 657



 Score =  235 bits (599), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 231/448 (51%), Gaps = 20/448 (4%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V S+N ++      G     L F+  +   +    LPN +T+N VI   C+L  +D A +
Sbjct: 203 VFSYNILIRGFCAAGNLEMGLRFFEEM---ERNRCLPNVVTYNTVIGAYCKLKRIDEAFK 259

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L R M +   EP++ TY  +++GLC+  R++E   +L EM   G  P  VT+N L+NG C
Sbjct: 260 LLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYC 319

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G   +A  L   M   G  P+ VTY +LI+ +C  GNL++A+   D+M      PN V
Sbjct: 320 KVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGV 379

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY ++ING  + G   +  R+   M    F      Y+ L++G    G+ E+A+ L + M
Sbjct: 380 TYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGM 439

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             KG  P+ V YS +I G CR  + D A ++  EM+  G + +A TYSSL++G  E  + 
Sbjct: 440 EGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRL 499

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           ++A +++++M   + + +E  Y+ LI+G C++G L EA  +  +M+ +G  PD V Y+ +
Sbjct: 500 NEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVL 559

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA---------------LCKQS 558
           I+GL       EA +L  ++   E  S P+  TY+ L+ +                C + 
Sbjct: 560 INGLNKQARTREAKRLLLKLFYDE--SIPNGITYDTLIESCSDIEFKSVVALIKGFCMKG 617

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            ++ +  +  SM+ R   P+    N+ +
Sbjct: 618 LMNEADQVFESMIKRNQKPNEAVYNVII 645



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 224/465 (48%), Gaps = 43/465 (9%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAI------------------------------------QL 214
           ++  F+LV+K+   L  ++ A+                                    ++
Sbjct: 131 SSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKV 190

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           +REM       ++++Y  L+ G C    L+  +   +EM+ + C P  VT+N +I   CK
Sbjct: 191 YREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCK 250

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
              +  A KL+ +M L+G  PN +TYN +I+GLC  G +++   +L  M      P+ VT
Sbjct: 251 LKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVT 310

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y T++NG  K+G       +   M       +   Y++LI+ + K G    AM+ + QM 
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMH 370

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            +G +PN V Y++LI+G  + G  DEA  I  EMI +G      TY++L+ G   SG+  
Sbjct: 371 VRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRME 430

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A+ + + M       + V YS +I G C   +L  A  +  +M+ +G  PD + YSS+I
Sbjct: 431 EAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLI 490

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GLC    + EA  LF EM  L     PD FTY  L+N  CK+ +++ +++L + M+ +G
Sbjct: 491 QGLCEQRRLNEACDLFQEM--LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKG 548

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
             PD VT N+ +  L +     Q  T     L ++LF  +    G
Sbjct: 549 FLPDTVTYNVLINGLNK-----QARTREAKRLLLKLFYDESIPNG 588



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 230/437 (52%), Gaps = 20/437 (4%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++N   + G +H+AL  ++ ++      + P+ +T+  +I T+C+ G ++ A++ F
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRN---GLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M VR   P+  TY +L++G  ++  +DEA  + DEM   G  PT VT+N L+NG C +
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G +  A  L+  M  KG  P+ V+Y+T+I G C    LD+A  +   MV     P+ +TY
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++I GL +  R  +   +   M  +    +E+ Y++LI+G  KEG   +A+ L  +M++
Sbjct: 487 SSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIK 546

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM----------- 444
           KG  P+TV Y+ LI+GL +  +  EA+ +L ++  +    N  TY +L+           
Sbjct: 547 KGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSV 606

Query: 445 ----KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
               KGF   G  ++A ++++ M K N   NE  Y+V+IHG C DG + +A  ++ +M+ 
Sbjct: 607 VALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVD 666

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  P  V   +++  L + G  E+   +  ++L     S  ++    + +N   K+ NI
Sbjct: 667 FGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINH--KEGNI 724

Query: 561 SHSIDLLNSMMDRGCDP 577
               +LL  M   G  P
Sbjct: 725 DAVFNLLTEMAKDGFLP 741



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 194/399 (48%), Gaps = 26/399 (6%)

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL--CLKGNLDK 315
           C  +   F++++        + +A  +VD   L G +P  ++YN ++  +  C K  +  
Sbjct: 128 CNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVI-F 186

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +   M+AS    N  +Y  +I G    G    G R    ME  +   N   Y+T+I 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              K  + ++A KL + M  +G +PN + Y+ +I+GLCRVG+ +E   +L EM   G A 
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  TY++L+ G+ + G  H+A+ +  +M +N    + V Y+ LI+ +C+ G L  A   +
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            QM  RG +P+ V Y+S+I+G    G ++EA ++++EM  +     P + TYN LLN  C
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEM--IRSGFPPTIVTYNALLNGHC 424

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
               +  +I LL  M  +G  PD+V+ +  +                         + Q 
Sbjct: 425 VSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAG---------------------FCRYQE 463

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               F++   M++K +SP   T+  ++Q LC  +R+  A
Sbjct: 464 LDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEA 502



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 206/443 (46%), Gaps = 25/443 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  Y   G+F    ++   M R        ++  +     KA  +  A+  F   
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF--- 366

Query: 145 VDEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            D+ H +       ++ S++N   Q+G    A   ++ ++ +      P  +T+N ++  
Sbjct: 367 -DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRS---GFPPTIVTYNALLNG 422

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C  G ++ AI L R M  +   PD+ +Y T++ G C+   LD A  +  EM   G  P 
Sbjct: 423 HCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPD 482

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            +T++ LI GLC+   L  A  L   M  K  LP+E TY +LI+G C +G+L++A++L D
Sbjct: 483 AITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHD 542

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS------ 375
            M+    +P+ VTY  +INGL K  R  +  R+L+ +   +   N   Y TLI       
Sbjct: 543 EMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIE 602

Query: 376 ---------GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
                    G   +G   +A ++++ M+++  KPN  VY+ +I G CR G   +A ++  
Sbjct: 603 FKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYK 662

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM++ G   +  T  +L+K  +  G   +   + +D+ ++  + +      L+    ++G
Sbjct: 663 EMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELSKALVQINHKEG 722

Query: 487 KLREARMVWTQMLSRGCKPDVVA 509
            +     + T+M   G  P   A
Sbjct: 723 NIDAVFNLLTEMAKDGFLPSGAA 745


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 140/446 (31%), Positives = 228/446 (51%), Gaps = 38/446 (8%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            + +A      V+EA+RL   ++  F C+  V S+N+VL  +     +    +    +V 
Sbjct: 186 LVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVA 245

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           A      PN +TF+ +I  +CR GL +   ++  +M    C PD+  Y T++DG+CKE R
Sbjct: 246 A---GCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEER 302

Query: 243 L-----------------------------------DEAVLLLDEMQVDGCFPTPVTFNV 267
           L                                   +EA  LL EM    C    VTFN+
Sbjct: 303 LEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNI 362

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L++ LC+NG + R  ++++ M   GC+P+ +TY T+I+G C +G +D+AV LL  M A  
Sbjct: 363 LVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACG 422

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C PN V+Y  ++ GL    R VD   ++  M ++    N   ++TLI+ L K+G  E A+
Sbjct: 423 CRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 482

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           +L KQM+  GC P+ + YS +IDGL + G  DEA E+L  M+  G + N   YSS+    
Sbjct: 483 ELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASAL 542

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
              G+ +K +++++++       + V Y+ +I  LC+ G+   A      M+S GC P+ 
Sbjct: 543 SGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNE 602

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEM 533
             Y+ +I GL + G V+EA ++  E+
Sbjct: 603 STYTILIRGLASEGFVKEAQEILTEL 628



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 234/462 (50%), Gaps = 35/462 (7%)

Query: 196 NLVIKTVCRLGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           NLV++ VC  G VD A++L R++ P   CEPD+ +Y  ++ GLC   R      L++EM 
Sbjct: 185 NLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMV 244

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             GC P  VTF+ LI  LC+NG   R  ++   M   GC P+   Y T+I G+C +  L+
Sbjct: 245 AAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLE 304

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A  +L+RM +    PN V Y T++ GL    R  +   +L  M ++   +++  ++ L+
Sbjct: 305 VARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILV 364

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L + G  +  +++ +QM+E GC P+ + Y+ +I+G C+ G  DEA  +L  M   GC 
Sbjct: 365 DFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCR 424

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  +Y+ ++KG   + +   A E+   M +  C  N V ++ LI+ LC+ G + +A  +
Sbjct: 425 PNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 484

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKS------------ 540
             QML  GC PD+++YS++I GL  AG+ +EAL+L N M+   + P +            
Sbjct: 485 LKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSG 544

Query: 541 -------------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
                              + D   YN ++++LCK+     +I+ L  M+  GC P+  T
Sbjct: 545 EGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNEST 604

Query: 582 CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
             I +  L  +    ++  + L EL  +   R+     F IV
Sbjct: 605 YTILIRGLASEGFV-KEAQEILTELCSKGALRKHLMKHFGIV 645



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 245/488 (50%), Gaps = 24/488 (4%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +       A  + + PN  T+  +++ +C  G + +A+ +  +M  R C P    
Sbjct: 89  YCRAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPM 148

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y   ++  C+ +    AV +L ++   GC       N+++  +C  G +  A +L+ ++ 
Sbjct: 149 YHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLL 208

Query: 290 LK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              GC P+ V+YN ++ GLC+         L++ MVA+ C PN VT+ T+I  L + G  
Sbjct: 209 PSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLF 268

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                V   M E     +  +Y+T+I G+ KE + E A  +  +M   G  PN V Y+ L
Sbjct: 269 ERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTL 328

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           + GLC   + +EAE +L EM +  C  +  T++ L+    ++G   + +E+ + M ++ C
Sbjct: 329 LKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGC 388

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           + + + Y+ +I+G C++G + EA M+   M + GC+P+ V+Y+ ++ GLC+A    +A +
Sbjct: 389 MPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEE 448

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L ++M  ++    P+  T+N L+N LCK+  +  +I+LL  M+  GC PDL++ +  +  
Sbjct: 449 LMSQM--IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI-- 504

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                    DG          L K   T    +++ VM++K +SP T  +  +   L   
Sbjct: 505 ---------DG----------LGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGE 545

Query: 649 KRIQAAIN 656
            RI   I 
Sbjct: 546 GRINKVIQ 553



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 202/379 (53%), Gaps = 4/379 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI H   +G F+ +  V  +M         + +  I     K   +E A  + + M
Sbjct: 254 TFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRM 313

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
              +     V  +N++L  +     +  A      + +    +   + +TFN+++  +C+
Sbjct: 314 -PSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDK---DCPLDDVTFNILVDFLCQ 369

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLVD  I++  +M    C PD+ TY T+++G CKE  +DEAV+LL  M   GC P  V+
Sbjct: 370 NGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVS 429

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + +++ GLC       A +L+  M  +GC PN VT+NTLI+ LC KG +++A+ LL +M+
Sbjct: 430 YTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 489

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C P+ ++Y T+I+GL K G   +   +L  M ++    N  IYS++ S L  EG+  
Sbjct: 490 VNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRIN 549

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
             +++++ + +   + + V+Y+A+I  LC+ G+ D A E L  M+++GC  N  TY+ L+
Sbjct: 550 KVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILI 609

Query: 445 KGFFESGKGHKAVEIWKDM 463
           +G    G   +A EI  ++
Sbjct: 610 RGLASEGFVKEAQEILTEL 628



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 181/406 (44%), Gaps = 55/406 (13%)

Query: 300 YNTLIHG--------------------------------LCLKGNLDKAVSLLDRMVASK 327
           YN ++ G                                LC +G +  A+++LD M    
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVPVAPNAYTYFPLVRALCARGRIADALAVLDDMARRG 141

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C P    Y   +    +         VL  +  R   ++    + ++  +  +G  ++A+
Sbjct: 142 CAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAV 201

Query: 388 KLWKQMMEK-GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           +L + ++   GC+P+ V Y+A++ GLC   +    ++++ EM+  GC  N  T+S+L+  
Sbjct: 202 RLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGH 261

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
              +G   +  E+   MA++ C  +   Y+ +I G+C++ +L  AR +  +M S G  P+
Sbjct: 262 LCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPN 321

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP-DVFTYNILLNALCKQSNISHSID 565
           VV Y++++ GLC+A   EEA  L  EM     K  P D  T+NIL++ LC+   +   I+
Sbjct: 322 VVCYNTLLKGLCSADRWEEAEGLLAEMF---DKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 566 LLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQDGTDFLNELAI---------------R 609
           +L  M++ GC PD++T    +    KE L    +    L  +A                 
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLI--DEAVMLLRSMAACGCRPNTVSYTIVLKG 436

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           L   +R     +++  M+Q+   P   T+  ++  LC+   ++ AI
Sbjct: 437 LCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAI 482


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 245/453 (54%), Gaps = 7/453 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + +A++LF  M ++       K++  ++N + +      A++ +  +      N   +  
Sbjct: 93  IPDAVQLFDEMTEK-GLFGDAKTYGILINGLCKARKTGLAIKLHEKMKG----NCKGDVF 147

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+ ++I ++C+ G+   A+ +F EM      PD+  Y +LMDGLC+  RL EA+    EM
Sbjct: 148 TYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM 207

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G      T+N LI+GL + G        ++ M  +G  P+  T+  LI GLC +G +
Sbjct: 208 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKV 267

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  +L+ M      P+ +TY T++NGL  +G+  D  ++  S+ +R   +N + Y+ L
Sbjct: 268 GEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNIL 327

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G  K+ K ++A +L+++M  KG KP+TV Y+ LI  LC+ G+   A+++  EM   G 
Sbjct: 328 INGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQ 387

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                TY  L+ G  ++G   +A+++++ + K     N   +S+L+ G+C  GKL EA  
Sbjct: 388 FLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 447

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
            + ++   G +PD +AY+ +I+GLCN G + EA+KL  +M   E    PD  T+N+++  
Sbjct: 448 QFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM--EEKGCLPDSITFNVIIQN 505

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L K++ I  +I LL  M +R   PD    ++ L
Sbjct: 506 LLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/451 (31%), Positives = 228/451 (50%), Gaps = 19/451 (4%)

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           R  EPD  T  TL+ G+  EN + +AV L DEM   G F    T+ +LINGLCK  + G 
Sbjct: 71  RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGL 130

Query: 281 AAKLVDNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           A KL + M  KG C  +  TY  +I  LC  G   +A+ +   M+ +  +P+ V Y +++
Sbjct: 131 AIKLHEKM--KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +GL + GR  +       ME R    + Y Y++LI GL + G  ++       M+++G  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+   ++ LIDGLC+ GK  EA++IL  M + G   +  TY++LM G    G+   A ++
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           ++ +A      N   Y++LI+G C+D K+ EA  ++ +M  +G KP  V Y+++I  LC 
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           +G V  A KLF EM       +  + TY +LL+ LCK  ++  +IDL  S+      P++
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLK--LSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNI 426

Query: 580 VTCNIFLT----------ALKEKLEAPQDG----TDFLNELAIRLFKRQRTSGGFKIVEV 625
              +I L           A K+  E  ++G    T   N L   L  +   S   K++  
Sbjct: 427 EVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 486

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           M +K   P + T+  ++Q L +   I  AI 
Sbjct: 487 MEEKGCLPDSITFNVIIQNLLKENEIHEAIQ 517



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%), Gaps = 23/312 (7%)

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R F  +    +TL+ G++ E    DA++L+ +M EKG   +   Y  LI+GLC+  K  
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A + L E +   C  + FTY  ++    + G   +A++++ +M     + + V YS L+
Sbjct: 130 LAIK-LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GLC  G+L+EA   + +M  RG   DV  Y+S+IHGL  AG  +E     N  L ++  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLN--LMVDRG 246

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQ 597
             PD FT+ IL++ LCK+  +  +  +L  M  +G +PD++T N  +    L  +LE   
Sbjct: 247 FSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLE--- 303

Query: 598 DGTDFLNELAIRLF---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           D T     LA R                 K Q+    F++ E M  K L P T T+  ++
Sbjct: 304 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLI 363

Query: 643 QELCRPKRIQAA 654
             LC+  R++ A
Sbjct: 364 GALCQSGRVRTA 375



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 114/220 (51%), Gaps = 4/220 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +   Y K   ++EA RLF  M  +   K +  ++N+++  + Q G    A + +  
Sbjct: 323 SYNILINGYCKDQKIDEAFRLFEEMRPK-GLKPSTVTYNTLIGALCQSGRVRTAQKLFVE 381

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +        L    T+ +++  +C+ G ++ AI LF+ +     +P+I  +  L+DG+C+
Sbjct: 382 MQTCGQFLKLS---TYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCR 438

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             +L+EA    DE+  +G  P  + +N+LINGLC  G L  A KL+  M  KGCLP+ +T
Sbjct: 439 AGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSIT 498

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           +N +I  L  +  + +A+ LL+ M      P+E     ++
Sbjct: 499 FNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 87/203 (42%), Gaps = 48/203 (23%)

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------LCLEPKS 540
           L RG +PD V  ++++ G+     + +A++LF+EM                  LC   K+
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 541 --------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
                         + DVFTY +++++LCK    + ++D+ + M+  G  PD+V  +  +
Sbjct: 129 GLAIKLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 587 TALKEKLEAPQDGTDFLNELAIR-----------LFKRQRTSGGFKIV----EVMLQKFL 631
             L  +    ++  +F  E+  R           L      +G +K V     +M+ +  
Sbjct: 189 DGLC-RFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 632 SPQTSTWERVVQELCRPKRIQAA 654
           SP   T+  ++  LC+  ++  A
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEA 270


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 137/434 (31%), Positives = 228/434 (52%), Gaps = 14/434 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T TF  +I+ +C  G +  A+QLF +M     +PD+ TY TL++GLCK      A+  
Sbjct: 122 PSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRF 181

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M+   C PT V ++ +I+ LCK+ +L  A  L  +M  KG  PN  TY++LIHGLC+
Sbjct: 182 LRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCI 241

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+  +A+ L   M+  K MP+++T+ T+++ L K G  V    V+  M +     +   
Sbjct: 242 LGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVT 301

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++L+ G     +    + ++  M+ KGC P+ + Y+ LI+G C++   D+A  +  EM 
Sbjct: 302 YNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMS 361

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  TY++L+ G    G+   A+ ++ +M     + + V Y +L   LC++ +L 
Sbjct: 362 QQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLA 421

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYN 548
           EA ++   +      PD+  YS ++ G+C AG +E A  LF++   L  K   PDV TY 
Sbjct: 422 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSK---LSSKGLHPDVRTYT 478

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           I++N LC+Q  ++ +  L   M + GC P+  T N+         E  +         AI
Sbjct: 479 IMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLR---------AI 529

Query: 609 RLFKRQRTSGGFKI 622
           +LF+ +  S GF I
Sbjct: 530 QLFQ-EMLSRGFSI 542



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 219/447 (48%), Gaps = 23/447 (5%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D+A+ LF  M      P I  +  L+  + +       + L  +M   G      T N+
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LIN  C    LG A  ++ ++   G  P+  T+ TLI GLC++G + +A+ L D+M    
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+ +TYGT+INGL K+G      R L SME+R       +YST+I  L K+ +  +A+
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+  M+ KG  PN   YS+LI GLC +G   EA  + + MI+     +  T+++L+   
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + G   KA  +   M +++   + V Y+ L+ G C   ++ +   V+  M+ +GC P V
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           ++Y+++I+G C    +++A+ LF EM   +    PD  TYN L++ LC    +  +I L 
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMS--QQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 392

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVML 627
           + M+  G  PDLVT  I                D+L        K  R +    +++V+ 
Sbjct: 393 HEMVVYGQIPDLVTYRILF--------------DYL-------CKNHRLAEAMVLLKVIE 431

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAA 654
              L P    +  V+  +CR   ++AA
Sbjct: 432 GTNLDPDIHIYSIVMDGMCRAGELEAA 458



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 132/471 (28%), Positives = 237/471 (50%), Gaps = 9/471 (1%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           F+  +     KLG YQ   +TF +LI+     G       +  +M  E       ++  +
Sbjct: 107 FAFSVLGDILKLG-YQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTL 165

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
                K      AIR   +M ++ +C+ TV  ++++++ + ++     AL  ++ ++ AK
Sbjct: 166 INGLCKVGNTSTAIRFLRSM-EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDML-AK 223

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              I PN  T++ +I  +C LG    AI+LF  M  R   PD  T+ TL+D LCKE  + 
Sbjct: 224 --GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVV 281

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +A  ++D M      P  VT+N L++G C   E+G+   + D M  KGC+P+ ++Y TLI
Sbjct: 282 KAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLI 341

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +G C    +DKA+ L + M     +P+ VTY T+I+GL  +GR  D   +   M      
Sbjct: 342 NGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQI 401

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y  L   L K  +  +AM L K +      P+  +YS ++DG+CR G+ + A ++
Sbjct: 402 PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDL 461

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             ++ + G   +  TY+ ++ G  + G   +A +++ +M +N C  N   Y+++  G   
Sbjct: 462 FSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLR 521

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + +   A  ++ +MLSRG   DV   + ++  L + G +++++K   ++LC
Sbjct: 522 NNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG-LDQSVK---QILC 568



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 173/362 (47%), Gaps = 24/362 (6%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            +D A+SL +RM+  +  P+ V +  ++  + ++        +   M+      N Y  +
Sbjct: 34  TIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLN 93

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+      +   A  +   +++ G +P+T  ++ LI GLC  GK  EA ++  +M   
Sbjct: 94  ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  TY +L+ G  + G    A+   + M + NC    V YS +I  LC+D +L EA
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEA 213

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +++ ML++G  P+   YSS+IHGLC  G  +EA++LF  M+    K  PD  T+N L+
Sbjct: 214 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI--HRKIMPDQLTFNTLV 271

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVT-----------------CNIFLTALKEK-L 593
           +ALCK+  +  +  +++ M+     PD+VT                  N+F T +++  +
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV 331

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
            +    T  +N       K Q       + E M Q+ L P T T+  ++  LC   R++ 
Sbjct: 332 PSVISYTTLINGYC----KIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 387

Query: 654 AI 655
           AI
Sbjct: 388 AI 389



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 164/346 (47%), Gaps = 4/346 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI      G +K    + Y M   K +  + +F  +  A  K  +V +A  +   M
Sbjct: 231 TYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVM 290

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +     K  V ++NS+++         + +  ++ +V       +P+ +++  +I   C+
Sbjct: 291 IQS-DLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK---GCVPSVISYTTLINGYCK 346

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           + ++D A+ LF EM  +   PD  TY TL+ GLC   RL +A+ L  EM V G  P  VT
Sbjct: 347 IQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVT 406

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + +L + LCKN  L  A  L+  +      P+   Y+ ++ G+C  G L+ A  L  ++ 
Sbjct: 407 YRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLS 466

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    P+  TY  +INGL + G   + +++   M+E     N   Y+ +  G  +  +  
Sbjct: 467 SKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETL 526

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
            A++L+++M+ +G   +    + L++ L   G     ++IL E + 
Sbjct: 527 RAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQILCEFVQ 572


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 221/396 (55%), Gaps = 2/396 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT+++N+++  +C+LG V  A  L  +M  R   PD+ +Y  ++DG C+  +L + + L+
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           +E+Q  G  P   T+N +I+ LCK G +  A +++  M  +   P+ V Y TLI G    
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           GN+     L D M   K +P+ VTY ++I+GL + G+ V+  ++   M  +    +E  Y
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI G  K G+ ++A  L  QM+EKG  PN V Y+AL+DGLC+ G+ D A E+L EM  
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N  TY++L+ G  + G   +AV++ ++M       + + Y+ ++   C+ G++ +
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +   ML +G +P +V ++ +++G C +G +E+  +L   M  L+    P+  T+N L
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWM--LDKGIMPNATTFNSL 608

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +   C ++N+  +I++   M  +G  PD  T NI +
Sbjct: 609 MKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILI 644



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 240/488 (49%), Gaps = 7/488 (1%)

Query: 87  YSLIQHY-ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           Y++I H     G  K    +L +M     V    S+  I   Y +   + + ++L   + 
Sbjct: 255 YNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQ 314

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            +   K    ++NS+++ + + G   R +E    +   K+  I P+ + +  +I    + 
Sbjct: 315 RK-GLKPNQYTYNSIISFLCKTG---RVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G V    +LF EM  +   PD  TY +++ GLC+  ++ EA  L  EM   G  P  VT+
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             LI+G CK GE+  A  L + M  KG  PN VTY  L+ GLC  G +D A  LL  M  
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               PN  TY  +INGL K+G      +++  M+   F  +   Y+T++    K G+   
Sbjct: 491 KGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAK 550

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A +L + M++KG +P  V ++ L++G C  G  ++ E ++  M++ G   NA T++SLMK
Sbjct: 551 AHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMK 610

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
            +         +EI+K M     V +   Y++LI G C+   ++EA  +  +M+ +G   
Sbjct: 611 QYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSL 670

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
              +Y+S+I G       EEA KLF EM      ++ ++  Y+I ++   ++ N  ++++
Sbjct: 671 TAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEI--YDIFVDVNYEEGNWENTLE 728

Query: 566 LLNSMMDR 573
           L +  +++
Sbjct: 729 LCDEAIEK 736



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 205/458 (44%), Gaps = 41/458 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ S+I     +G     E VL  M+ ++       +  +   +GK+  V    +LF  M
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                                                  K   I+P+ +T+  +I  +C+
Sbjct: 384 ---------------------------------------KRKKIVPDFVTYTSMIHGLCQ 404

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A +LF EM  +  +PD  TY  L+DG CK   + EA  L ++M   G  P  VT
Sbjct: 405 AGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVT 464

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L++GLCK GE+  A +L+  M  KG  PN  TYN LI+GLC  GN+++AV L++ M 
Sbjct: 465 YTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMD 524

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +   P+ +TY TI++   K+G       +L  M ++        ++ L++G    G  E
Sbjct: 525 LAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLE 584

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           D  +L K M++KG  PN   +++L+   C         EI   M   G   +  TY+ L+
Sbjct: 585 DGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILI 644

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           KG  ++    +A  + K+M +         Y+ LI G  +  K  EAR ++ +M + G  
Sbjct: 645 KGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFI 704

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKS 540
            +   Y   +      G+ E  L+L +E +  CL  K+
Sbjct: 705 AEKEIYDIFVDVNYEEGNWENTLELCDEAIEKCLVKKT 742



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 210/444 (47%), Gaps = 52/444 (11%)

Query: 262 PVTFNVLINGLCKNGELGRAAKLVD--------------NMFLK---------------- 291
           P+ F+V    L + G L  A KL D              N+FL                 
Sbjct: 181 PLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVF 240

Query: 292 ------GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
                 G   N V+YN ++H LC  G + +A SLL +M     +P+ V+Y  I++G  ++
Sbjct: 241 REYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQV 300

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
            +     +++  ++ +    N+Y Y+++IS L K G+  +A ++ + M  +   P+ VVY
Sbjct: 301 EQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVY 360

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + LI G  + G      ++  EM       +  TY+S++ G  ++GK  +A +++ +M  
Sbjct: 361 TTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLS 420

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                +EV Y+ LI G C+ G+++EA  +  QM+ +G  P+VV Y++++ GLC  G V+ 
Sbjct: 421 KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDI 480

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A +L +EM   E   QP+V TYN L+N LCK  NI  ++ L+  M   G  PD +T    
Sbjct: 481 ANELLHEMS--EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTI 538

Query: 586 LTA---LKEKLEAP-----------QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
           + A   + E  +A            Q      N L            G ++++ ML K +
Sbjct: 539 MDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGI 598

Query: 632 SPQTSTWERVVQELCRPKRIQAAI 655
            P  +T+  ++++ C    ++A I
Sbjct: 599 MPNATTFNSLMKQYCIRNNMRATI 622


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  242 bits (617), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 134/401 (33%), Positives = 217/401 (54%), Gaps = 3/401 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+   +N VI   C+   VD+A ++   M  R  EPD+ TY  L+   C   RLD A+ +
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           +D++  D C PT +T+ +LI      G +  A KL+D M  +G  P+  TYN +++G+C 
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G LD+A   L R+  + C+    TY  ++  L+  G+   G +++  M  +    N   
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YSTLI+ L ++GK ++A  + K M EK   P+   Y  LI  LCR GK D A E L +MI
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG-KL 488
           + G   +  +Y+S++    ++G   +A+ I++ + +  C  N   Y+ L   L   G K+
Sbjct: 384 SGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKI 443

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           R   M+  +MLS G  PD + Y+S+I  LC  G V++A++L  +M   E K QP V +YN
Sbjct: 444 RALGMIL-EMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESE-KCQPTVISYN 501

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +L  LCK   I  +I++L +M++ GC P+  T  + +  +
Sbjct: 502 TVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 248/504 (49%), Gaps = 49/504 (9%)

Query: 78  SYQLGDSTFYSLIQHYANSGDF-KSLEMVLYRMRR--EKRVVLEKSFIFIFKAYGKAHLV 134
            Y   D+ F   +     S  + +SL  + + + R  +  V+L    I   K +     +
Sbjct: 72  DYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLI---KGFFNMKKI 128

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+AI++   +  E H K  V ++N+V++   +      A +  + +   K     P+ +T
Sbjct: 129 EKAIQVMEIL--EKHGKPDVFAYNAVISGFCKADRVDHASKVLDRM---KKRGFEPDVVT 183

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N++I   C  G +D A+++  ++   NC+P + TY  L++    +  +DEA+ LLDEM 
Sbjct: 184 YNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEML 243

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRA--------------------------------- 281
             G  P   T+NV++NG+CK G L RA                                 
Sbjct: 244 SRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWE 303

Query: 282 --AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
              KL+ +M +KGC PN +TY+TLI  LC  G +D+A ++L  M      P+  +Y  +I
Sbjct: 304 YGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLI 363

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYI-YSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           + L + G+ VD A   +       H+ + + Y+++++ L K G A++A+ +++++ E GC
Sbjct: 364 SALCREGK-VDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGC 422

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PN   Y+ L   L   G    A  ++ EM++NG   +  TY+SL+      G   +A+E
Sbjct: 423 PPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIE 482

Query: 459 IWKDMAKN-NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           +  DM ++  C    + Y+ ++ GLC+  ++ +A  V   M++ GC P+   Y+ +I G+
Sbjct: 483 LLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQ 541
             AG   +A++L N ++ ++  S+
Sbjct: 543 GFAGWRYDAMELANLLVNMDAISE 566



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/301 (26%), Positives = 148/301 (49%), Gaps = 24/301 (7%)

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M  R +  +  + + LI G F   K E A+++  +++EK  KP+   Y+A+I G C+
Sbjct: 100 LQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVM-EILEKHGKPDVFAYNAVISGFCK 158

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
             + D A ++L  M   G   +  TY+ L+  F   G+   A+ +   + K+NC    + 
Sbjct: 159 ADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVIT 218

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y++LI      G + EA  +  +MLSRG +PD   Y+ +++G+C  G ++ A +  + + 
Sbjct: 219 YTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRIS 278

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
             +      V TYNILL  L  +    +   L++ M+ +GC+P+ +T +  +TAL     
Sbjct: 279 --KNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITAL----- 331

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             +DG               +      +++VM +K L+P   +++ ++  LCR  ++  A
Sbjct: 332 -CRDG---------------KIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLA 375

Query: 655 I 655
           I
Sbjct: 376 I 376



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 17/186 (9%)

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C+  K  E+      M++RG KPDV+  + +I G  N   +E+A+++   M  LE   +P
Sbjct: 88  CKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQV---MEILEKHGKP 144

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT----------ALKEK 592
           DVF YN +++  CK   + H+  +L+ M  RG +PD+VT NI +           AL+  
Sbjct: 145 DVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVM 204

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGF----KIVEVMLQKFLSPQTSTWERVVQELCRP 648
            +  +D           L +   T GG     K+++ ML + L P   T+  VV  +C+ 
Sbjct: 205 DQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKE 264

Query: 649 KRIQAA 654
             +  A
Sbjct: 265 GMLDRA 270


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 236/427 (55%), Gaps = 7/427 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V ++N+VL + + +     A  F + ++  +H  + PN  T+N++++ +C  G ++ A+
Sbjct: 117 SVPAYNAVL-LALSDASLPSARRFLSSML--RH-GVAPNVYTYNILVRALCARGRLEEAV 172

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPVTFNVLING 271
            +  +M    C P+  TY TL+   C+   LD A  ++  M+ +G   P  VTFN ++NG
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK G +  A K+ D M  +G  P+ V+YNTL+ G C  G L +++++   M     +P+
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VT+ ++I+   K G       ++  M ER   +NE  ++ LI G  K+G  +DA+   +
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M + G +P+ V Y+ALI+G C++G+ D A E++ EM       +  TYS+++ G+ + G
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
               A ++ + M K   + + + YS LI GLCE+ +L +A  ++  ML  G +PD   Y+
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYT 472

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           ++I G C  G+VE+AL L +EM  +     PDV TY++L+N L K +    +  LL  + 
Sbjct: 473 TLIDGHCKEGNVEKALSLHDEM--IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530

Query: 572 DRGCDPD 578
                PD
Sbjct: 531 HEDPVPD 537



 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 134/403 (33%), Positives = 217/403 (53%), Gaps = 4/403 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+   +N V+  +    L  +A +    M      P++YTY  L+  LC   RL+EAV +
Sbjct: 116 PSVPAYNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGLC 308
           + +M+  GC P  VT+N L+   C+ GEL  A ++V  M  +G   PN VT+N++++GLC
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G ++ A  + D MV     P+ V+Y T+++G  K+G   +   V   M +R    +  
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            +++LI    K G  E A+ L  QM E+G + N V ++ALIDG C+ G  D+A   + EM
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G   +   Y++L+ G+ + G+   A E+ ++M       + V YS +I G C+ G L
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  +ML +G  PD + YSS+I GLC    + +A +LF  ML L    QPD FTY 
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL--GVQPDEFTYT 472

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            L++  CK+ N+  ++ L + M+ +G  PD+VT ++ +  L +
Sbjct: 473 TLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 515



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/484 (30%), Positives = 241/484 (49%), Gaps = 20/484 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ +L+  +  +G+    E V+  MR E        +F  +     KA  +E A ++F  
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV E      V S+N++L+   + G  H +L  ++ +       ++P+ +TF  +I   C
Sbjct: 249 MVREGLAPDVV-SYNTLLSGYCKVGCLHESLAVFSEMT---QRGLVPDVVTFTSLIHATC 304

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G ++ A+ L  +M  R    +  T+  L+DG CK+  LD+A+L ++EM+  G  P+ V
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 364

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N LING CK G +  A +L+  M  K   P+ VTY+T+I G C  GNLD A  L  +M
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +    +P+ +TY ++I GL +  R  D   +  +M +     +E+ Y+TLI G  KEG  
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E A+ L  +M+ KG  P+ V YS LI+GL +  +  EA  +LF++ +     +   Y +L
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 544

Query: 444 M---------------KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           M               KGF   G   +A ++++ M   N   +   YS+LIHG C  G +
Sbjct: 545 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 604

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           R+A     QML  G  P+  +  S++ GL   G V EA     ++L   P +  +     
Sbjct: 605 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 664

Query: 549 ILLN 552
           I LN
Sbjct: 665 IDLN 668



 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 215/408 (52%), Gaps = 19/408 (4%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N  PN +TFN ++  +C+ G ++ A ++F EM      PD+ +Y TL+ G CK   L E+
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + +  EM   G  P  VTF  LI+  CK G L +A  LV  M  +G   NEVT+  LI G
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHV 365
            C KG LD A+  ++ M      P+ V Y  +ING  KLGR +D AR L+  ME ++   
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR-MDLARELIREMEAKRVKP 396

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   YST+ISG  K G  + A +L ++M++KG  P+ + YS+LI GLC   + ++A E+ 
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M+  G   + FTY++L+ G  + G   KA+ +  +M +   + + V YSVLI+GL + 
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYS---------------SMIHGLCNAGSVEEALKLF 530
            + +EA  +  ++      PD + Y                +++ G C  G ++EA K++
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVY 576

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             M  L+   + D   Y+IL++  C+  N+  ++     M+  G  P+
Sbjct: 577 QSM--LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 203/402 (50%), Gaps = 27/402 (6%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P+   +N ++  L  +  L  A + + +M   G  PN  TYN L+  LC +G L++A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM--EERKFHVNEYIYSTLI 374
           V ++  M  + C PN VTY T++    + G  +DGA  ++S+  EE     N   +++++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE-LDGAERVVSLMREEGNAKPNLVTFNSMV 230

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +GL K G+ E A K++ +M+ +G  P+ V Y+ L+ G C+VG   E+  +  EM   G  
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  T++SL+    ++G   +AV +   M +     NEV ++ LI G C+ G L +A + 
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M   G +P VV Y+++I+G C  G ++ A +L  EM     + +PDV TY+ +++  
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA--KRVKPDVVTYSTIISGY 408

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           CK  N+  +  L   M+ +G  PD +T +  +  L E+                     +
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE---------------------K 447

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           R +   ++ E MLQ  + P   T+  ++   C+   ++ A++
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 159/535 (29%), Positives = 268/535 (50%), Gaps = 50/535 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++ AI  F+ M+       TV  FN +L  I +   +H  L   +H +++    I PN  
Sbjct: 42  IDGAISSFNRMLRMQPPPSTV-DFNKLLTSIAKMK-HHSTLLSLSHQMDS--FGIPPNIY 97

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T +++I + C L  V  A  +  ++     +PD  T+ TL+ G+C E ++ EA+ L D+M
Sbjct: 98  TLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKM 157

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  LINGLCK G    A +L+ +M  K C PN   YNT+I  LC    +
Sbjct: 158 IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 217

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +L   MV     P+  TY ++I+ L  L      A +L  M + K   +   ++T+
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEGK  +A  +  +M+++G +PN V Y+AL+DG C + + DEA ++   M+  GC
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337

Query: 434 AANAFTYSSLMKGFFESGKGHK-------------------AVEIWKDMAKNNCVYNEVC 474
             N  +Y++L+ G+ +  +  K                   AV+++  M    C+ N + 
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVIS 397

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ LI+G C+  ++ +A  ++ +M  +   PD V YS++IHGLC+   +++A+ LF+EM+
Sbjct: 398 YNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEK 592
                  P++ TY ILL+ LCK   ++ ++ LL ++     DPD+   NI +  +    +
Sbjct: 458 ACS--QIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGE 515

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           LEA +D           LF    + G            L P   T+  ++  LCR
Sbjct: 516 LEAARD-----------LFSNLSSKG------------LQPDVWTYSIMINGLCR 547



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 240/488 (49%), Gaps = 33/488 (6%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EA+ LF  M+ E   +  V ++ +++N + + G    A+     +V     N  PN  
Sbjct: 147 IGEALHLFDKMIGEGF-RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK---NCQPNVF 202

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N +I ++C+   V  A  LF EM  +   PDI+TY +L+  LC          LL+EM
Sbjct: 203 AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  V+FN +++ LCK G++  A  +VD M  +G  PN VTY  L+ G CL   +
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA--------------------R 353
           D+AV + D MV   CMPN ++Y T+ING  K+ R +D A                    +
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR-IDKAIHYTXLMDXXCCYLNMDEAVK 381

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           V  +M  +    N   Y+TLI+G  K  + + AM L+ +M  +   P+TV YS LI GLC
Sbjct: 382 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 441

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
            V +  +A  +  EM+      N  TY  L+    ++    +A+ + K +  +N   +  
Sbjct: 442 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 501

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             ++ I G+C  G+L  AR +++ + S+G +PDV  YS MI+GLC  G ++EA KLF EM
Sbjct: 502 VNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 561

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
              E     +   YN +     + +  S +I LL  M+ RG   D  T  +F+  L +  
Sbjct: 562 --DENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD-- 617

Query: 594 EAPQDGTD 601
               DG D
Sbjct: 618 ----DGLD 621



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 206/424 (48%), Gaps = 24/424 (5%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  +  K   V EA  LF  MV +      + ++NS+++ +     +       N +V++
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTK-GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I+P+ ++FN V+  +C+ G V  A  +  +M  R  EP++ TY  LMDG C  + +
Sbjct: 266 K---IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA-------------------AKL 284
           DEAV + D M   GC P  +++N LING CK   + +A                    K+
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKV 382

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
            D M  KGC+PN ++YNTLI+G C    +DKA+ L   M   + +P+ VTY T+I+GL  
Sbjct: 383 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 442

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           + R  D   +   M       N   Y  L+  L K     +AM L K +      P+  V
Sbjct: 443 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 502

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
            +  IDG+CR G+ + A ++   + + G   + +TYS ++ G    G   +A +++++M 
Sbjct: 503 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 562

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +N C  N   Y+ +  G   + +   A  +  +M++RG   D    +  +  L + G ++
Sbjct: 563 ENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG-LD 621

Query: 525 EALK 528
           ++LK
Sbjct: 622 QSLK 625



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 189/370 (51%), Gaps = 26/370 (7%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V SFN+V++ + +EG    A +  + ++      + PN +T+  ++   C L  +D A++
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQR---GVEPNVVTYTALMDGHCLLSEMDEAVK 327

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENR-------------------LDEAVLLLDEMQ 254
           +F  M  + C P++ +Y TL++G CK  R                   +DEAV + D M 
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMV 387

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             GC P  +++N LING CK   + +A  L   M  +  +P+ VTY+TLIHGLC    L 
Sbjct: 388 CKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 447

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A++L   MVA   +PN VTY  +++ L K     +   +L ++E      +  + +  I
Sbjct: 448 DAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAI 507

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G+ + G+ E A  L+  +  KG +P+   YS +I+GLCR G  DEA ++  EM  NGC 
Sbjct: 508 DGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCT 567

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N   Y+++ +GF  + +  +A+++ ++M       +    ++ +  L +DG  +  +  
Sbjct: 568 LNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLK-- 625

Query: 495 WTQMLSRGCK 504
             Q+L  GCK
Sbjct: 626 --QILRNGCK 633



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 218/503 (43%), Gaps = 87/503 (17%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
           + L    H ++  H      +L FN +          D AI  F  M      P    + 
Sbjct: 16  QMLSLLPHFLSLSHNRFHSKSLHFNTI----------DGAISSFNRMLRMQPPPSTVDFN 65

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L+  + K       + L  +M   G  P   T ++LIN  C    +G A  ++  +   
Sbjct: 66  KLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL 125

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+  T+ TLI G+C++G + +A+ L D+M+     P+ VTYG               
Sbjct: 126 GHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYG--------------- 170

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
                               TLI+GL K G    A++L   M++K C+PN   Y+ +ID 
Sbjct: 171 --------------------TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDS 210

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC+  +  EA  +  EM+  G + + FTY+SL+       +      +  +M  +  + +
Sbjct: 211 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 270

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V ++ ++  LC++GK+ EA  V  +M+ RG +P+VV Y++++ G C    ++EA+K+F+
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQS-------------------NISHSIDLLNSMMD 572
            M+C      P+V +YN L+N  CK                     N+  ++ + ++M+ 
Sbjct: 331 TMVC--KGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVC 388

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
           +GC P++++ N  +                         K QR      +   M ++ L 
Sbjct: 389 KGCMPNVISYNTLINGY---------------------CKIQRIDKAMYLFGEMCRQELI 427

Query: 633 PQTSTWERVVQELCRPKRIQAAI 655
           P T T+  ++  LC  +R+Q AI
Sbjct: 428 PDTVTYSTLIHGLCHVERLQDAI 450



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           QM S G  P++     +I+  C+   V  A  +  ++L L    QPD  T+  L+  +C 
Sbjct: 86  QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL--GHQPDTATFTTLIRGICV 143

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
           +  I  ++ L + M+  G  PD+VT    +  L                      K   T
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGL---------------------CKVGNT 182

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           S   +++  M+QK   P    +  ++  LC+ +++  A N
Sbjct: 183 SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 152/580 (26%), Positives = 274/580 (47%), Gaps = 56/580 (9%)

Query: 96  SGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK 155
           +GD   ++  L  MR       E + +    A+ +A   + A++ F+   D       V+
Sbjct: 11  AGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVR 70

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
            +N +L+ +++E +    +  Y+   N +   + PN  T+NL+I+ +C+   VD A ++ 
Sbjct: 71  VYNHLLDALLRENMVGAVVPVYD---NMRKAGVDPNVYTYNLLIRALCQNDRVDAARKML 127

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEA----------------------------- 246
            EM  + C PD  ++ T++ G+CK  R++EA                             
Sbjct: 128 DEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWE 187

Query: 247 -VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
              +++EM   G  P  VT+  +++  CK  EL  A  ++  M   GC PN +T+  L+ 
Sbjct: 188 VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVK 247

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G    G +  A+S+   MV     P+ ++Y  +I GL  +G          SM+      
Sbjct: 248 GFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLP 307

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   YSTL+ G    G  + AM +W +M   GCKPN VVY+ +ID LC+    D+AE ++
Sbjct: 308 NATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLI 367

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            +M+ + C  N  T+++L+    + G+  +A+ ++  M +N C  N+  Y+ L+HGL  +
Sbjct: 368 DKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFRE 427

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G  ++A  +  +ML+ G +  +V Y+++I+ LC     + A+ L   M+      QPD F
Sbjct: 428 GNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMV--QGIQPDAF 485

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           T+N +++A CK+  +S +  LL  M    C  ++V   I ++ L  + +        L+ 
Sbjct: 486 TFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGK--------LSN 537

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
             + L K             ML + + P  +TW  +V+ +
Sbjct: 538 AMVYLLK-------------MLYEGICPNEATWNVLVRAI 564



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 135/487 (27%), Positives = 222/487 (45%), Gaps = 54/487 (11%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           I    R G  D A++ F       C +P +  Y  L+D L +EN +   V + D M+  G
Sbjct: 40  IGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAG 99

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA- 316
             P   T+N+LI  LC+N  +  A K++D M  KGC P+EV++ T++ G+C  G +++A 
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 159

Query: 317 -----------------------------VSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                                         S+++ MV     PN VTY TI++   K   
Sbjct: 160 GFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARE 219

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                 +L  M       N   ++ L+ G F++GK  DA+ +W  M+++G  P+T+ Y+ 
Sbjct: 220 LRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNV 279

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI GLC +G    A +    M  N    NA TYS+L+ GF  +G    A+ IW +M  + 
Sbjct: 280 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 339

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  N V Y+ +I  LC+     +A  +  +ML   C P+ V ++++I  LC+ G V  AL
Sbjct: 340 CKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRAL 399

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            +F+ M        P+  TYN LL+ L ++ N   +  ++  M++ G +  LVT N  + 
Sbjct: 400 NVFHGM--RRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVIN 457

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            L +           + + A+ L  R    G            + P   T+  ++   C+
Sbjct: 458 CLCQMC---------MRKHAMLLLGRMMVQG------------IQPDAFTFNAIIHAYCK 496

Query: 648 PKRIQAA 654
             ++  A
Sbjct: 497 EGKVSIA 503



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 191/402 (47%), Gaps = 23/402 (5%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA---------------- 183
           + H +  EF   R  + F SV+N ++Q GL    +  Y  IV+A                
Sbjct: 175 VVHALCGEF---RMWEVF-SVVNEMVQRGLQPNVVT-YTTIVDAFCKARELRMACAILAR 229

Query: 184 -KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
              M   PN LTF  ++K     G V +A+ ++  M      P   +Y  L+ GLC    
Sbjct: 230 MVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGD 289

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L  A+   + M+ +   P   T++ L++G    G+L  A  + + M   GC PN V Y  
Sbjct: 290 LKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 349

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I  LC K   D+A SL+D+M+   C PN VT+ T+I  L   GR      V   M    
Sbjct: 350 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
            H N+  Y+ L+ GLF+EG  +DA  +  +M+  G + + V Y+ +I+ LC++     A 
Sbjct: 410 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAM 469

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +L  M+  G   +AFT+++++  + + GK   A  +   M   NC  N V Y++LI  L
Sbjct: 470 LLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISEL 529

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL-CNAGSV 523
           C  GKL  A +   +ML  G  P+   ++ ++  +  N G++
Sbjct: 530 CNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTI 571



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 183/423 (43%), Gaps = 31/423 (7%)

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL- 294
           GL     +D     L EM++ G   T       I    + G   RA K        GC  
Sbjct: 7   GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P    YN L+  L  +  +   V + D M  +   PN  TY  +I  L +  R VD AR 
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDR-VDAARK 125

Query: 355 LMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           ++  M  +  H +E  + T++SG+ K G+ E+A     + +     P    Y+A++  LC
Sbjct: 126 MLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV-----PVQASYNAVVHALC 180

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
              +  E   ++ EM+  G   N  TY++++  F ++ +   A  I   M    C  N +
Sbjct: 181 GEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 240

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            ++ L+ G  EDGK+ +A  +W  M+  G  P  ++Y+ +I GLC  G ++ AL  FN M
Sbjct: 241 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 300

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
                   P+  TY+ L++      ++  ++ + N M   GC P++V     +  L +K+
Sbjct: 301 K--RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 358

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                           +F +  +     +++ ML     P T T+  ++  LC   R+  
Sbjct: 359 ----------------MFDQAES-----LIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGR 397

Query: 654 AIN 656
           A+N
Sbjct: 398 ALN 400



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 147/311 (47%), Gaps = 4/311 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++  LI+     GD K        M+R   +    ++  +   +  A  ++ A+ +++ M
Sbjct: 276 SYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEM 335

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                CK  V  + ++++V+ ++ ++ +A    + ++     N  PNT+TFN +I  +C 
Sbjct: 336 KSS-GCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD---NCPPNTVTFNTLIGRLCD 391

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A+ +F  M    C P+  TY  L+ GL +E    +A  ++ EM  +G   + VT
Sbjct: 392 CGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVT 451

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N +IN LC+      A  L+  M ++G  P+  T+N +IH  C +G +  A  LL +M 
Sbjct: 452 YNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMN 511

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A  C  N V Y  +I+ L   G+  +    L+ M       NE  ++ L+  +F      
Sbjct: 512 AVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTI 571

Query: 385 DAMKLWKQMME 395
             + L+K ++E
Sbjct: 572 GPIHLFKYIVE 582


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 254/498 (51%), Gaps = 10/498 (2%)

Query: 103 EMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN 162
           E+ L R R + +  L   F  + +AY +     EA+  F+ ++ E      +++ N +L+
Sbjct: 133 ELALARDRVDAKTTL--IFDLLVRAYCELKKPNEALECFY-LIKEKGFVPNIETCNQMLS 189

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
           + ++      A   Y  +     MNI  +  TFN++I  +C+ G +  A +    M    
Sbjct: 190 LFLKLNRTQMAWVLYAEMF---RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLG 246

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
            +P++ TY T++ G C   +   A ++   M+  G  P   T+N  I+GLCK G L  A+
Sbjct: 247 VKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEAS 306

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
            L+  M   G +PN VTYN LI G C KG+LDKA +  D M++   M + VTY   I+ L
Sbjct: 307 GLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHAL 366

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
              GR  D   ++  M E+    +   ++ LI+G  + G A+ A  L  +M+ KG +P  
Sbjct: 367 FMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTL 426

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V Y++LI  L +  +  EA+ +  ++   G   +   +++L+ G   +G   +A ++ K+
Sbjct: 427 VTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKE 486

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M     + +E+ Y+ L+ G C +GK+ EAR +  +M  RG KPD ++Y+++I G    G 
Sbjct: 487 MDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGD 546

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           +++A ++ +EM+       P + TYN L+  LCK     H+ +LL  M+ +G  PD  T 
Sbjct: 547 MKDAFRVRDEMMT--TGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTY 604

Query: 583 NIFLTALK--EKLEAPQD 598
              + A++  + LE   D
Sbjct: 605 LSIIEAMETVDDLEGNDD 622



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 221/463 (47%), Gaps = 23/463 (4%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           TL F+L+++  C L   + A++ F  +  +   P+I T   ++    K NR   A +L  
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM       +  TFN++IN LCK G+L +A + + +M   G  PN VTYNT+IHG CL+G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
              +A  +   M      P+  TY + I+GL K GR  + + ++  M E     N   Y+
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI G   +G  + A     +M+ KG   + V Y+  I  L   G+  +A+ ++ EM   
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +A T++ L+ G+   G   +A  +  +M         V Y+ LI+ L +  +++EA
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +++++   G  PD++ ++++I G C  G+++ A +L  EM  +  K  PD  TYN L+
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNM--KVLPDEITYNTLM 503

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
              C++  +  +  LL+ M  RG  PD ++ N  ++                        
Sbjct: 504 QGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYS--------------------- 542

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           KR      F++ + M+     P   T+  ++Q LC+ +  + A
Sbjct: 543 KRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHA 585


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 133/420 (31%), Positives = 231/420 (55%), Gaps = 5/420 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           +L+ + H+V  +    LP+   F+ ++  + ++   D  I L+ +M +     ++ T   
Sbjct: 65  SLDLFFHMVQCRP---LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C+ ++L  A+  L +M   G  P  VTF  L+NG C+   +  A  + D M   G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN V YNT+I GLC    +D A+ LL+RM      P+ VTY ++I+GL   GR  D  
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R++  M +R+ + + + ++ LI    KEG+  +A +L+++M+ +   P+ V YS LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   + DEAE++   M++ GC  +  TYS L+ G+ +S K    ++++ +M++   V N 
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+VLI G C  GKL  A  ++  M+  G  P+++ Y+ ++HGLC+ G +E+AL +  +
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   +     D+ TYNI++  +CK   ++ + DL  S+  +G  PD+ T    +  L +K
Sbjct: 422 M--QKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKK 479



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 233/448 (52%), Gaps = 12/448 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKR--TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           +++++ LF  MV    C+   ++  F+ +L+ I +   Y   +  +  +   + + I  N
Sbjct: 62  LDDSLDLFFHMV---QCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM---QMLGIPHN 115

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             T N+++   CR   +  A+    +M     EPDI T+ +L++G C+ +R+ +A+ + D
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFD 175

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            M   G  P  V +N +I+GLCK+ ++  A  L++ M + G  P+ VTYN+LI GLC  G
Sbjct: 176 RMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSG 235

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
             D A  ++  M   +  P+  T+  +I+  VK GR  +   +   M  R    +   YS
Sbjct: 236 RWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYS 295

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI GL    + ++A +++  M+ KGC P+ V YS LI+G C+  K +   ++  EM   
Sbjct: 296 LLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  TY+ L++G+  +GK + A EI+K M       N + Y+VL+HGLC++GK+ +A
Sbjct: 356 GVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKA 415

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNIL 550
            ++   M   G   D+V Y+ +I G+C AG V +A  L+     L  K   PD++TY  +
Sbjct: 416 LVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCS---LNLKGLTPDIWTYTAM 472

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPD 578
           +  L K+     +  L   M + G  P+
Sbjct: 473 MLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 194/383 (50%), Gaps = 4/383 (1%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D+++ LF  M      P I  +  L+  + K  + D  + L ++MQ+ G      T N+
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L+N  C+  +L  A   +  M   G  P+ VT+ +L++G C    +  A+ + DRMV   
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN V Y TII+GL K  +  +   +L  ME      +   Y++LISGL   G+ +DA 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           ++   M ++   P+   ++ALID   + G+  EAEE+  EMI      +  TYS L+ G 
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
               +  +A +++  M    C  + V YS+LI+G C+  K+     ++ +M  RG   + 
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEML-CLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           V Y+ +I G C AG +  A ++F  M+ C  P   P++ TYN+LL+ LC    I  ++ +
Sbjct: 362 VTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVP---PNIITYNVLLHGLCDNGKIEKALVI 418

Query: 567 LNSMMDRGCDPDLVTCNIFLTAL 589
           L  M   G D D+VT NI +  +
Sbjct: 419 LADMQKSGMDADIVTYNIIIRGM 441



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 168/357 (47%), Gaps = 39/357 (10%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + +F S+LN   +    + AL  ++ +V    M   PN + +N +I  +C+   VDNA+ 
Sbjct: 151 IVTFGSLLNGFCRGDRIYDALYMFDRMV---EMGYEPNVVIYNTIIDGLCKSKQVDNALD 207

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L   M V    PD  TY +L+ GLC   R D+A  ++  M     +P   TFN LI+   
Sbjct: 208 LLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACV 267

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G +  A +L + M  +   P+ VTY+ LI+GLC+   LD+A  +   MV+  C P+ V
Sbjct: 268 KEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVV 327

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +ING  K  +   G ++   M +R    N   Y+ LI G  + GK   A +++K M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387

Query: 394 MEKGCKPNTVVYSAL-----------------------------------IDGLCRVGKP 418
           +  G  PN + Y+ L                                   I G+C+ G+ 
Sbjct: 388 VFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEV 447

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            +A ++   +   G   + +TY+++M G ++ G   +A  +++ M ++  + NE CY
Sbjct: 448 ADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE-CY 503



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 147/299 (49%), Gaps = 16/299 (5%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S L+S + K  K +  + LW+QM   G   N    + L++  CR  +   A   L +M+
Sbjct: 84  FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMM 143

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  T+ SL+ GF    + + A+ ++  M +     N V Y+ +I GLC+  ++ 
Sbjct: 144 KLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVD 203

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  +  +M   G +PD V Y+S+I GLCN+G  ++A ++ + M   + +  PDVFT+N 
Sbjct: 204 NALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMT--KREIYPDVFTFNA 261

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFL---- 603
           L++A  K+  IS + +L   M+ R  DPD+VT ++ +  L    +L+  +    F+    
Sbjct: 262 LIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKG 321

Query: 604 --------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   + L     K ++   G K+   M Q+ +   T T+  ++Q  CR  ++  A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVA 380



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 126/251 (50%), Gaps = 10/251 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF +LI      G     E +   M R   +  +V     I+    Y +   ++EA ++F
Sbjct: 258 TFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSR---LDEAEQMF 314

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             MV +  C   V +++ ++N   +       ++ +  +       ++ NT+T+ ++I+ 
Sbjct: 315 GFMVSK-GCFPDVVTYSILINGYCKSKKVEHGMKLFCEM---SQRGVVRNTVTYTVLIQG 370

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            CR G ++ A ++F+ M      P+I TY  L+ GLC   ++++A+++L +MQ  G    
Sbjct: 371 YCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDAD 430

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+N++I G+CK GE+  A  L  ++ LKG  P+  TY  ++ GL  KG   +A +L  
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFR 490

Query: 322 RMVASKCMPNE 332
           +M     +PNE
Sbjct: 491 KMKEDGILPNE 501


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 245/489 (50%), Gaps = 41/489 (8%)

Query: 131 AHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA------- 183
            H VE  I  +     + H       F+    V+++ GL + A +F++ ++N        
Sbjct: 22  THFVERLIYTYKDWGSDPHV------FDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAG 75

Query: 184 --------------------------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
                                       + +  NT ++N+++ ++ RLG +  A  L   
Sbjct: 76  SCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMR 135

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M  + C PD+ +Y T++DG C    L + V L+ EMQ+ G  P   T++ +I  LCK+G+
Sbjct: 136 MEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGK 195

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +    K++  M  +G  P+ V Y TLI G C  GN   A  L   M A + +P+ + +  
Sbjct: 196 VVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSA 255

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I GL   G+ V+  ++   M ++ F  +E  Y+ LI G  K G+ + A  L  QM++ G
Sbjct: 256 LICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIG 315

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             PN V Y+AL DGLC+ G+ D A E+L EM   G   N  TY++++ G  ++G   +AV
Sbjct: 316 LTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAV 375

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           ++ ++M +     + + Y+ L+    + G++ +AR +  +ML RG +P VV ++ +++GL
Sbjct: 376 KLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGL 435

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C +G +E+  +L   M  LE    P+  TYN ++   C ++N+  S ++   M  +G  P
Sbjct: 436 CMSGKLEDGERLLKWM--LEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVP 493

Query: 578 DLVTCNIFL 586
           D  T NI +
Sbjct: 494 DSNTYNILI 502



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/512 (26%), Positives = 250/512 (48%), Gaps = 19/512 (3%)

Query: 68  EIFNSTPKLG------SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF 121
           ++F+  P+LG      SY +  ++ + L       G  +    +L RM  +  +    S+
Sbjct: 96  KVFSEFPQLGVCWNTESYNILMNSLFRL-------GKIREAHHLLMRMEFKGCIPDVVSY 148

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
             I   Y     +++ ++L   M  +   K  + +++S++ ++ + G   + +E    + 
Sbjct: 149 TTIIDGYCHVGELQKVVQLVKEMQLK-GLKPNLYTYSSIILLLCKSG---KVVEGEKVLR 204

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
                 + P+ + +  +I   C+LG    A +LF EM  R   PD   +  L+ GL    
Sbjct: 205 EMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSG 264

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           ++ EA  L +EM   G  P  VT+  LI+G CK GE+ +A  L + M   G  PN VTY 
Sbjct: 265 KVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYT 324

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            L  GLC  G LD A  LL  M       N  TY TI+NGL K G  +   +++  M+E 
Sbjct: 325 ALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
             H +   Y+TL+   +K G+   A +L ++M+++G +P  V ++ L++GLC  GK ++ 
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDG 444

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           E +L  M+  G   NA TY+S+MK +        + EI++ M     V +   Y++LI G
Sbjct: 445 ERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKG 504

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C+   ++EA  +  +M+ +       +Y+++I G      + EA +LF EM      + 
Sbjct: 505 HCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVAS 564

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
            ++  YN+ ++   ++ N+  +++L +  +++
Sbjct: 565 AEI--YNLFVDMNYEEGNMETTLELCDEAIEK 594



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 218/436 (50%), Gaps = 17/436 (3%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC-KNGELGRAAKL 284
           D + +      L +   L+EA    D++   G   +  + N+ +  L  K   LG   K+
Sbjct: 38  DPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKV 97

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
                  G   N  +YN L++ L   G + +A  LL RM    C+P+ V+Y TII+G   
Sbjct: 98  FSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCH 157

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           +G      +++  M+ +    N Y YS++I  L K GK  +  K+ ++MM++G  P+ V+
Sbjct: 158 VGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVI 217

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ LIDG C++G    A ++  EM       ++  +S+L+ G   SGK  +A +++ +M 
Sbjct: 218 YTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI 277

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           K     +EV Y+ LI G C+ G++++A  +  QM+  G  P+VV Y+++  GLC +G ++
Sbjct: 278 KKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELD 337

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
            A +L +EM       Q ++ TYN ++N LCK  NI  ++ L+  M + G  PD +T   
Sbjct: 338 TANELLHEMC--RKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTT 395

Query: 585 FLTA-------------LKEKLE-APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
            + A             L+E L+   Q      N L   L    +   G ++++ ML+K 
Sbjct: 396 LMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKG 455

Query: 631 LSPQTSTWERVVQELC 646
           + P  +T+  ++++ C
Sbjct: 456 IMPNAATYNSIMKQYC 471



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 147/286 (51%), Gaps = 23/286 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ L++ LF+ GK  +A  L  +M  KGC P+ V Y+ +IDG C VG+  +  +++ EM 
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   N +TYSS++    +SGK  +  ++ ++M K     + V Y+ LI G C+ G  +
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  ++++M +R   PD +A+S++I GL  +G V EA KLFNEM+  +   +PD  TY  
Sbjct: 233 AAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMI--KKGFEPDEVTYTA 290

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L++  CK   +  +  L N M+  G  P++VT     TAL + L       D  NEL   
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVT----YTALADGL-CKSGELDTANEL--- 342

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                        +  M +K L    ST+  +V  LC+   I  A+
Sbjct: 343 -------------LHEMCRKGLQLNISTYNTIVNGLCKAGNILQAV 375


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 150/527 (28%), Positives = 266/527 (50%), Gaps = 22/527 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+  F+ ++   H   ++  F  +L  I +   Y   L     +       + PN  
Sbjct: 37  LDDALSSFNRLL-HMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM---DSFGVPPNVY 92

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I + C L  V  A  +  ++     +PD  T+ TL+ GLC E ++ EA+ L D+M
Sbjct: 93  TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 152

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  LINGLCK G    A +L+ +M    C P+ V Y ++I  LC    +
Sbjct: 153 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +L  +MV     P+  TY ++++ L  L        +L  M   K   +  I+ST+
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEGK  +A ++   M+++G +P+ V Y+ L+DG C   + DEA ++   M+  G 
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A +  +Y++L+ G+ +  K  KA+ ++++M +   + +   Y+ L+HGLC  G+L++A  
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           ++ +M++RG  PD+V YS ++  LC    +EEA+ L      +E  +  PD+  YNI+++
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLK---AIEASNLNPDIQVYNIIID 449

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--------KEKLEAPQDGTD--- 601
            +C+   +  + DL +++  +G  P + T NI +  L          KL    DG D   
Sbjct: 450 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 509

Query: 602 ---FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
                N +A    +   T    +++E ML +  S   ST   +V+ L
Sbjct: 510 DGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 228/446 (51%), Gaps = 11/446 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F +++  +  EG    AL  ++ +++       PN +T+  +I  +C++G    AI+L 
Sbjct: 128 TFTTLIRGLCVEGKIGEALHLFDKMIDE---GFQPNVVTYGTLINGLCKVGNTSAAIRLL 184

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R M   NC+PD+  Y +++D LCK+ ++ EA  L  +M   G  P   T+  L++ LC  
Sbjct: 185 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 244

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            E      L++ M     LP+ V ++T++  LC +G + +A  ++D M+     P+ VTY
Sbjct: 245 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 304

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G        +  +V   M  + F  +   Y+TLI+G  K  K + AM L+++M  
Sbjct: 305 TTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCR 364

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P+T  Y+ L+ GLC VG+  +A  +  EM+  G   +  TYS L+    ++    +
Sbjct: 365 KEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEE 424

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ + K +  +N   +   Y+++I G+C  G+L  AR +++ + S+G  P V  Y+ MIH
Sbjct: 425 AMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIH 484

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  G + EA KLF EM   +    PD  TYN +     + +    +I LL  M+ RG 
Sbjct: 485 GLCKRGLLNEANKLFMEMDGND--CSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 542

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTD 601
             D+ T  + +  L +      DG D
Sbjct: 543 SADVSTTTLLVEMLSD------DGLD 562



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 213/411 (51%), Gaps = 10/411 (2%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVE 135
           +Q    T+ +LI      G+  +   +L  M +   +  VV+  S I    +  K   V 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSII---DSLCKDRQVT 213

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA  LF  MV +      + ++ S+++ +     +       N +VN+K   ILP+ + F
Sbjct: 214 EAFNLFSQMVGQ-GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK---ILPDVVIF 269

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           + V+  +C+ G V  A ++   M  R  EPD+ TY TLMDG C ++ +DEAV + D M  
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P  +++  LING CK  ++ +A  L + M  K  +P+  TYNTL+HGLC  G L  
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQD 389

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A++L   MVA   MP+ VTY  +++ L K     +   +L ++E    + +  +Y+ +I 
Sbjct: 390 AIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIID 449

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G+ + G+ E A  L+  +  KG  P+   Y+ +I GLC+ G  +EA ++  EM  N C+ 
Sbjct: 450 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 509

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +  TY+++ +GF ++ +  +A+++ ++M       +    ++L+  L +DG
Sbjct: 510 DGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 220/457 (48%), Gaps = 5/457 (1%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           F+  +     KLG +Q   +TF +LI+     G       +  +M  E       ++  +
Sbjct: 109 FAFSVLAKILKLG-HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTL 167

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
                K      AIRL  +M ++ +C+  V  + S+++ + ++     A   ++ +V   
Sbjct: 168 INGLCKVGNTSAAIRLLRSM-EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG-- 224

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              I P+  T+  ++  +C L    +   L  +M      PD+  + T++D LCKE ++ 
Sbjct: 225 -QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 283

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  ++D M   G  P  VT+  L++G C   E+  A K+ D M  KG  P+ ++Y TLI
Sbjct: 284 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 343

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +G C    +DKA+ L + M   + +P+  TY T+++GL  +GR  D   +   M  R   
Sbjct: 344 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQM 403

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   YS L+  L K    E+AM L K +      P+  VY+ +IDG+CR G+ + A ++
Sbjct: 404 PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 463

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              + + G   + +TY+ ++ G  + G  ++A +++ +M  N+C  +   Y+ +  G  +
Sbjct: 464 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 523

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           + +   A  +  +ML+RG   DV   + ++  L + G
Sbjct: 524 NNETLRAIQLLEEMLARGFSADVSTTTLLVEMLSDDG 560



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 173/359 (48%), Gaps = 20/359 (5%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A+S  +R++     P+ V +  ++  + K+        +   M+      N Y  + 
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI+      +   A  +  ++++ G +P+   ++ LI GLC  GK  EA  +  +MI+ G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  TY +L+ G  + G    A+ + + M + NC  + V Y+ +I  LC+D ++ EA 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +++QM+ +G  PD+  Y+S++H LCN    +    L N+M+    K  PDV  ++ +++
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV--NSKILPDVVIFSTVVD 274

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR--- 609
           ALCK+  ++ + ++++ M+ RG +PD+VT    +      L++  D    + ++ +R   
Sbjct: 275 ALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG--HCLQSEMDEAVKVFDMMVRKGF 332

Query: 610 -------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                          K  +      + E M +K   P T T+  ++  LC   R+Q AI
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAI 391


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 275/566 (48%), Gaps = 44/566 (7%)

Query: 59  AKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE 118
           ++ ++  + + F    +   Y+     +Y+++   + +   +    +L  M R       
Sbjct: 173 SQDDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSP 232

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           ++F ++  +Y +A ++  A+R+  T++ +   +  +   N+ + V+++     +AL F  
Sbjct: 233 EAFSYVMVSYSRAGMLRNALRIL-TLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLE 291

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +   K   I P+ +++N +IK  C +  +D+A++L  EMP + C PD  +Y T+M  LC
Sbjct: 292 RM---KVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLC 348

Query: 239 KENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGL------------------------- 272
           K+ +++E   L++ M Q     P  VT+N LI  L                         
Sbjct: 349 KDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDK 408

Query: 273 ----------CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
                     CKN  + +A  LV +M+ KGC P+ VTY  +I G C  G +D+A  +L +
Sbjct: 409 VGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQ 468

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C PN VTY  ++NGL   G++++   ++   EE  +  N   YS ++ GL +EGK
Sbjct: 469 MYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGK 528

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             +A  L ++M+EKG  PN V  + LI  LCR      A++ L E ++ GCA N   ++S
Sbjct: 529 LSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTS 588

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ GF + G    A+ + +DM  +N   + + Y+ L   L +  +L EA  +  +ML +G
Sbjct: 589 VIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKG 648

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P  V Y ++IH  C  G V++ +KL  +M+      QP    YN ++  LC   N   
Sbjct: 649 IDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIA----RQPFKTVYNQVIEKLCYFGNREE 704

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +  LL  ++      D  TC+I + +
Sbjct: 705 AEKLLGKVLRTASKLDAKTCHILIES 730



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 179/651 (27%), Positives = 301/651 (46%), Gaps = 88/651 (13%)

Query: 33  ERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLG-DSTFYSLIQ 91
           + S  F S      SNKQ E   +     E  F   I     +L S +   +  F   ++
Sbjct: 98  DESFEFISSFDGNGSNKQRENIARFEI-DESEFRHPIVREVCRLISLRSNWNPKFEENLR 156

Query: 92  HYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK 151
           H   S + + +  VL R + ++R+ L+    F + A  +     +AI +++TM+D     
Sbjct: 157 HLLRSLNPRLVCAVL-RSQDDERIALD----FFYWADRQWRYRHDAI-VYYTMLDILSKT 210

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R  +    +L ++ + G+  R+ E                   F+ V+ +  R G++ NA
Sbjct: 211 RLCQGARRILRLMTRRGI-ERSPE------------------AFSYVMVSYSRAGMLRNA 251

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           +++   M     EPD+    T +  L K N+L++A+  L+ M+V G  P  V++N LI G
Sbjct: 252 LRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKG 311

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA-SKCMP 330
            C    +  A +L+  M  KGC P++V+Y T++  LC    +++   L++ MV  S  +P
Sbjct: 312 YCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIP 371

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           ++VTY T+I  L K G A D    L   EE+ FH+++  YS ++    K    + A  L 
Sbjct: 372 DQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLV 431

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M  KGC P+ V Y+A+IDG CRVGK DEA+++L +M  +GC  N  TY+ L+ G   +
Sbjct: 432 IDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHN 491

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM------------ 498
           GK  +A E+     ++    N + YS ++HGL  +GKL EA  +  +M            
Sbjct: 492 GKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDI 551

Query: 499 -----------------------LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
                                  L +GC  +VV ++S+I+G C  G ++ AL +  +M  
Sbjct: 552 NLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYL 611

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
                 PD  TY  L +AL K+S +  + +L+  M+ +G DP  VT    +         
Sbjct: 612 --SNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIH-------- 661

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                        R  +  R     K++E M+ +   P  + + +V+++LC
Sbjct: 662 -------------RFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLC 697



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 165/352 (46%), Gaps = 37/352 (10%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC----------- 238
           P+ +T+  +I   CR+G +D A ++ ++M    C+P+  TY  L++GLC           
Sbjct: 441 PDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREM 500

Query: 239 ------------------------KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
                                   +E +L EA  L  EM   G  P PV  N+LI  LC+
Sbjct: 501 INVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCR 560

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
           N  +  A K ++    KGC  N V + ++I+G C  G+LD A+S+L+ M  S   P+ +T
Sbjct: 561 NQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAIT 620

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y T+ + L K  R  + + +++ M  +        Y  +I    + G+ +D MKL ++M+
Sbjct: 621 YTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMI 680

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            +  +P   VY+ +I+ LC  G  +EAE++L +++      +A T   L++ +   G   
Sbjct: 681 AR--QPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLIDGNAL 738

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
            A ++   M + N + +      +   L  DG   EA  +  + + RG + +
Sbjct: 739 SAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEADDLMLRFVERGIQTE 790


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 169/637 (26%), Positives = 299/637 (46%), Gaps = 56/637 (8%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +F+S  +   Y      ++ +++  + +     +  ++  +R ++    E   + + K Y
Sbjct: 29  LFDSATRHPGYAHSAVVYHHILRRLSEARMVTHVGRIVELIRSQECKCDEDVALSVIKTY 88

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           GK  + + A+ +F  M + F C+  ++S+N++LN  ++   + +    + +   A    +
Sbjct: 89  GKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETA---GV 145

Query: 189 LPNTLTFNLVIKTVCR-----------------------------------LGLVDNAIQ 213
            PN  T+N++IK  C+                                    G +D+A++
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALE 205

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPVTFNVLINGL 272
           LF EM  R   PD+  Y  L+DG  KE     A+ L D++  D   +P   T N++I+GL
Sbjct: 206 LFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGL 265

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            K G +    K+ D M       +  TY++LIHGLC +GN+DKA S+ + +V  K   + 
Sbjct: 266 SKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDV 325

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY T++ G  + G+  +   +   ME+R   VN   Y+ LI GL + GK ++A  +W+ 
Sbjct: 326 VTYNTMLGGFCRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRL 384

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M  KG   +   Y   I GLC  G  ++A  ++ E+ + G   + + Y+S++    +  +
Sbjct: 385 MPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRR 444

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A  + K+M+K+    N    + LI GL  D +L +A ++   M   GC P VV+Y+ 
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNI 504

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I GLC AG   EA     EML  E   +PD+ TY+ILL  LC+   I  +++L +  + 
Sbjct: 505 LICGLCEAGKFGEASAFVKEML--ENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQ 562

Query: 573 RGCDPDLVTCNIFLTAL------------KEKLEAPQDGTDFL--NELAIRLFKRQRTSG 618
            G +PD++  NI +  L               +E      + +  N L    FK + ++ 
Sbjct: 563 SGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNR 622

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              I   M +  L P   ++  +++ LC   R+  AI
Sbjct: 623 ATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAI 659



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 262/538 (48%), Gaps = 37/538 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI+      +F+     L  M +E       S+  +     K   +++A+ LF  M
Sbjct: 151 TYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEM 210

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E      V  +N +++  ++E  +  A++ ++ ++  +  ++ PN  T N++I  + +
Sbjct: 211 -SERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLL--EDSSVYPNVKTHNIMISGLSK 267

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD+ ++++  M     E D+YTY +L+ GLC E  +D+A  + +E+     F   VT
Sbjct: 268 CGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVT 327

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N ++ G C+ G++  + +L   M  +  + N V+YN LI GL   G +D+A  +   M 
Sbjct: 328 YNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLENGKIDEATMIWRLMP 386

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A     +  TYG  I+GL   G       V+  +E +  H++ Y Y+++I  L K+ + E
Sbjct: 387 AKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLE 446

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A  L K+M + G + N+ V +ALI GL R  +  +A  ++  M  NGC     +Y+ L+
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILI 506

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  E+GK  +A    K+M +N    +   YS+L+ GLC D K+  A  +W Q L  G +
Sbjct: 507 CGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLE 566

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------------------- 533
           PDV+ ++ +IHGLC+ G +++A+ +   M                               
Sbjct: 567 PDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVI 626

Query: 534 --LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                +   QPD+ +YN +L  LC    +S++I+  +   + G  P + T NI + A+
Sbjct: 627 WGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILVRAV 684



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 194/386 (50%), Gaps = 5/386 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++A  +F+ +V E      V ++N++L    + G    +LE +  +     +NI+    
Sbjct: 306 VDKAESVFNELV-ERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSVNIV---- 360

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N++IK +   G +D A  ++R MP +    D  TY   + GLC    +++A+ ++ E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEV 420

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G       +  +I+ LCK   L  A+ LV  M   G   N    N LI GL     L
Sbjct: 421 ESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A  L+  M  + C+P  V+Y  +I GL + G+  + +  +  M E     +   YS L
Sbjct: 481 SDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSIL 540

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL ++ K E A++LW Q ++ G +P+ ++++ LI GLC VGK D+A  ++  M +  C
Sbjct: 541 LGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
            AN  TY++LM+G+F+    ++A  IW  M K     + + Y+ ++ GLC   ++  A  
Sbjct: 601 TANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIE 660

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCN 519
            +    + G  P V  ++ ++  + N
Sbjct: 661 FFDDARNHGIFPTVYTWNILVRAVVN 686


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  241 bits (616), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 145/553 (26%), Positives = 262/553 (47%), Gaps = 59/553 (10%)

Query: 156  SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
            +++ V+  +       +A   +  +   K   I+P+  T+ ++I + C+ GL+  A + F
Sbjct: 462  TYSKVIGFLCDASKVEKAFSLFEEM---KRNGIVPSVYTYTILIDSFCKAGLIQQARKWF 518

Query: 216  REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             EM  + C P++ TY  L+    K  ++  A  L + M ++GC P  VT+  LI+G CK 
Sbjct: 519  DEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKA 578

Query: 276  GELGRAAKLVDNMFLKGCL------------------PNEVTYNTLIHGLCLKGNLDKAV 317
            G++ +A ++   M  +G +                  PN +TY  L+ GLC    + +A 
Sbjct: 579  GQIEKACQIYARM--RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAH 636

Query: 318  SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
             LLD M+A  C PN++ Y  +I+G  K+G+  D   V   M ER +  N Y YS+ I  L
Sbjct: 637  ELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCL 696

Query: 378  FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            FK+ + +  +K+  +M+E  C PN V+Y+ ++DGLC++GK DEA +++ +M   GC  N 
Sbjct: 697  FKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNV 756

Query: 438  FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             TY++++ GF +SGK  + +E+++DM    C  N + Y VLI+  C +G L EA  +  +
Sbjct: 757  VTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDE 816

Query: 498  MLSRGCKPDVVAYSSMIHGLCN---------------------------------AGSVE 524
            M        ++++  +I G                                    AG +E
Sbjct: 817  MKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLE 876

Query: 525  EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
             AL L  E+      +  + + Y  L+  L   S +  +++L  SM+ +   P+L     
Sbjct: 877  VALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVH 936

Query: 585  FLTAL--KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
             +  L   +K +     +D + ++ I   + + T    ++V++++   +  +T   E ++
Sbjct: 937  LIKGLIKVDKWQEALQLSDSICQMDIHWLQEKATGRTEEMVKLVIAAMVEAETGVSEEIL 996

Query: 643  QELCRPKRIQAAI 655
             E C    I   I
Sbjct: 997  -ERCSSYSINVRI 1008



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 208/401 (51%), Gaps = 18/401 (4%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + ++ N +  +   + +C  G  D A ++  EM  +   PD  TY  ++  LC  +++++
Sbjct: 419 LGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEK 478

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  L +EM+ +G  P+  T+ +LI+  CK G + +A K  D M  KGC PN VTY  LIH
Sbjct: 479 AFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIH 538

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME------ 359
                  +  A  L + M+   C PN VTY  +I+G  K G+     ++   M       
Sbjct: 539 AYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESS 598

Query: 360 --ERKFHV--------NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
             ++ F +        N   Y  L+ GL K  + ++A +L   M+  GC+PN +VY A+I
Sbjct: 599 DMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVI 658

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG C++GK  +A+E+  +M   G + N +TYSS +   F+  +    +++   M +N+C 
Sbjct: 659 DGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCT 718

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N V Y+ ++ GLC+ GK  EA  +  +M  +GC P+VV Y++MI G   +G +E+ L+L
Sbjct: 719 PNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLEL 778

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           F +M        P+  TY +L+N  C    +  +  LL+ M
Sbjct: 779 FRDM--CSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM 817



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/498 (26%), Positives = 229/498 (45%), Gaps = 42/498 (8%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T +    ++C+ G    A  L  E    +  PD   Y  ++ GLC+ +  +EA+ +L  M
Sbjct: 248 TLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRM 305

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +   C P  VT+ +L++G  + G+LGR  +++  M  +GC PN   +N+LIH  C   + 
Sbjct: 306 RSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDY 365

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH--------V 365
             A  L  +M+   C P  + Y   I  +         +  ++ + E+ +         +
Sbjct: 366 SYAYKLFKKMIKCGCQPGYLVYNIFIGSVC--SNEEQPSSDILDLVEKAYSEMLDLGVVL 423

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N+   S     L   GK + A K+  +MM KG  P+   YS +I  LC   K ++A  + 
Sbjct: 424 NKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLF 483

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM  NG   + +TY+ L+  F ++G   +A + + +M    C  N V Y+ LIH   + 
Sbjct: 484 EEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKA 543

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---- 541
            ++  A  ++  ML  GCKP+VV Y+++I G C AG +E+A +++  M      S     
Sbjct: 544 KQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKY 603

Query: 542 ----------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
                     P+V TY  L++ LCK + +  + +LL++M+  GC+P+ +  +  +     
Sbjct: 604 FKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFC- 662

Query: 592 KLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           K+   QD  +   +++ R               LFK  R     K++  ML+   +P   
Sbjct: 663 KIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVV 722

Query: 637 TWERVVQELCRPKRIQAA 654
            +  +V  LC+  +   A
Sbjct: 723 IYTEMVDGLCKIGKTDEA 740



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 237/470 (50%), Gaps = 24/470 (5%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           DST+  +I    ++   +    +   M+R   V    ++  +  ++ KA L+++A + F 
Sbjct: 460 DSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFD 519

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+ +  C   V ++ ++++  ++      A E +  ++        PN +T+  +I   
Sbjct: 520 EMLHK-GCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLE---GCKPNVVTYTALIDGH 575

Query: 203 CRLGLVDNAIQLFREM---------------PVRNCE-PDIYTYCTLMDGLCKENRLDEA 246
           C+ G ++ A Q++  M                  NCE P++ TY  L+DGLCK NR+ EA
Sbjct: 576 CKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEA 635

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             LLD M   GC P  + ++ +I+G CK G+L  A ++   M  +G  PN  TY++ I  
Sbjct: 636 HELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDC 695

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           L     LD  + +L +M+ + C PN V Y  +++GL K+G+  +  ++++ MEE+  + N
Sbjct: 696 LFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPN 755

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+ +I G  K GK E  ++L++ M  KGC PN + Y  LI+  C  G  DEA ++L 
Sbjct: 756 VVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLD 815

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM       +  ++  +++GF  S +   ++ +  ++++N  V  +  Y +LI    + G
Sbjct: 816 EMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAG 873

Query: 487 KLREARMVWTQMLSRGCKP--DVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           +L  A  +  ++ S       +   Y+S+I  L +A  V++AL+L+  M+
Sbjct: 874 RLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMI 923



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 142/324 (43%), Gaps = 24/324 (7%)

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           + LM +++    +   + + L+    + G    A++   ++ + G KP+   Y+ALI   
Sbjct: 162 KFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVF 221

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            R  K D A  +  EM++     + +T S       + GK  +A ++  +    + V + 
Sbjct: 222 LRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AEDFVPDT 279

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ ++ GLCE     EA  +  +M S  C P+VV Y  ++ G    G +    ++ + 
Sbjct: 280 VFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSM 339

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M  +     P+   +N L++A CK  + S++  L   M+  GC P  +  NIF+ ++   
Sbjct: 340 M--ITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSN 397

Query: 593 LEAPQ---------------DGTDFLNELAIRLFKRQRTSGG-----FKIVEVMLQKFLS 632
            E P                D    LN++ +  F R     G     FKI+  M+ K   
Sbjct: 398 EEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFV 457

Query: 633 PQTSTWERVVQELCRPKRIQAAIN 656
           P  ST+ +V+  LC   +++ A +
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFS 481



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 107/233 (45%), Gaps = 8/233 (3%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
            +EA +L   M +E  C   V ++ ++++   + G   + LE +  + +       PN +
Sbjct: 737 TDEAYKLMLKM-EEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSK---GCAPNFI 792

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+ ++I   C  GL+D A +L  EM        I ++  +++G  +E     ++ LLDE+
Sbjct: 793 TYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE--FITSIGLLDEL 850

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK--GCLPNEVTYNTLIHGLCLKG 311
             +   P    + +LI+   K G L  A  L++ +       + N+  Y +LI  L    
Sbjct: 851 SENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHAS 910

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            +DKA+ L   M++   +P       +I GL+K+ +  +  ++  S+ +   H
Sbjct: 911 KVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMDIH 963


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 139/458 (30%), Positives = 238/458 (51%), Gaps = 19/458 (4%)

Query: 130 KAHLVEEAIRLFHTMVDEFH------CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +A    E++     MVD+ +      C + +K F +  N+    G   R +E        
Sbjct: 81  RAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNI----GKATRVMEILERYGK- 135

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P+   +N +I    +   ++NA ++   M  R   PD+ TY  ++   C   +L
Sbjct: 136 ------PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKL 189

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A+ + +E+  D C PT +T+ +LI     +G +  A KL+D M  KG  P+ +TYN +
Sbjct: 190 DLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAI 249

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G+C +  +DKA  LL  + +  C P+ +TY  ++  L+  G+  +G +++  M     
Sbjct: 250 IRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGC 309

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   +S LI  L ++GK E+A+ L + M EKG KP+   Y  LI G CR G+ D A E
Sbjct: 310 KPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATE 369

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
            L  MI++GC  +   Y+++M G   +GK  +A+E+++ + +  C  N   Y+ L   L 
Sbjct: 370 FLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALW 429

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
             G    A  +  ++L++G  PD + Y+S+I  LC  G V+EA++L  +M     + +P+
Sbjct: 430 SSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQ--SGRYRPN 487

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           V +YNI+L  LCK +  + +I++L +M ++GC P+  T
Sbjct: 488 VVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETT 525



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 243/448 (54%), Gaps = 9/448 (2%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN- 182
           + K +  +  + +A R+   +  E + K  V ++N++++  I+       LE  N +++ 
Sbjct: 110 LIKGFFNSRNIGKATRVMEIL--ERYGKPDVFAYNALISGFIKAN----QLENANRVLDR 163

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            K    LP+ +T+N++I + C  G +D A+++F E+   NCEP + TY  L++    +  
Sbjct: 164 MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGG 223

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           +D A+ LLDEM   G  P  +T+N +I G+CK   + +A +L+ ++  +GC P+ +TYN 
Sbjct: 224 IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           L+  L  +G   +   L+  M++  C PN VT+  +I  L + G+  +   +L SM+E+ 
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              + Y Y  LI+G  +EG+ + A +  + M+  GC P+ V Y+ ++ GLCR GK D+A 
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           E+  ++   GC  N  +Y++L    + SG  ++A+E+   +       +E+ Y+ LI  L
Sbjct: 404 EVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCL 463

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C DG + EA  +   M S   +P+VV+Y+ ++ GLC      +A+++   M   E   QP
Sbjct: 464 CRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAM--TEKGCQP 521

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSM 570
           +  TY +L+  +      + +++L NS+
Sbjct: 522 NETTYILLIEGIGFSGLRAEAMELANSL 549



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 236/488 (48%), Gaps = 35/488 (7%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +LN   + G Y+ +L F   +V+  +    P+ +    +IK       +  A ++  E+ 
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYT---PDVILCTKLIKGFFNSRNIGKATRVM-EIL 130

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
            R  +PD++ Y  L+ G  K N+L+ A  +LD M+  G  P  VT+N++I   C  G+L 
Sbjct: 131 ERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLD 190

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A ++ + +    C P  +TY  LI    L G +D A+ LLD M++    P+ +TY  II
Sbjct: 191 LALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAII 250

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            G+ K         +L S+  R    +   Y+ L+  L   GK  +  KL  +M+  GCK
Sbjct: 251 RGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCK 310

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN V +S LI  LCR GK +EA  +L  M   G   +A+ Y  L+ GF   G+   A E 
Sbjct: 311 PNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEF 370

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            + M  + C+ + V Y+ ++ GLC  GK  +A  V+ ++   GC P+V +Y+++   L +
Sbjct: 371 LEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWS 430

Query: 520 AG----SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           +G    ++E  LKL N+ +       PD  TYN L++ LC+   +  +I+LL  M     
Sbjct: 431 SGDRYRALEMILKLLNQGI------DPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRY 484

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            P++V+ NI L                     + L K  R +   +++  M +K   P  
Sbjct: 485 RPNVVSYNIIL---------------------LGLCKVNRANDAIEVLAAMTEKGCQPNE 523

Query: 636 STWERVVQ 643
           +T+  +++
Sbjct: 524 TTYILLIE 531



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 206/423 (48%), Gaps = 45/423 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
            + +LI  +  +   ++   VL RM+       VV     I  F + GK  L   A+ +F
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDL---ALEIF 196

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             ++ + +C+ TV ++  ++   I +G    A++  + +++     + P+TLT+N +I+ 
Sbjct: 197 EELLKD-NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSK---GLEPDTLTYNAIIRG 252

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTY------------------------------- 230
           +C+  +VD A +L R +  R C+PDI TY                               
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312

Query: 231 ----CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
                 L+  LC++ +++EAV LL  M+  G  P    ++ LI G C+ G L  A + ++
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M   GCLP+ V YNT++ GLC  G  D+A+ + +++    C PN  +Y T+ + L   G
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
                  +++ +  +    +E  Y++LIS L ++G  ++A++L   M     +PN V Y+
Sbjct: 433 DRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYN 492

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            ++ GLC+V + ++A E+L  M   GC  N  TY  L++G   SG   +A+E+   +   
Sbjct: 493 IILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGM 552

Query: 467 NCV 469
           N +
Sbjct: 553 NAI 555



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 198/402 (49%), Gaps = 17/402 (4%)

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L+N  C+ G+   +   ++ M  KG  P+ +    LI G     N+ KA  +++ ++   
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVME-ILERY 133

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+   Y  +I+G +K  +  +  RVL  M+ R F  +   Y+ +I      GK + A+
Sbjct: 134 GKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLAL 193

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           ++++++++  C+P  + Y+ LI+     G  D A ++L EM++ G   +  TY+++++G 
Sbjct: 194 EIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGM 253

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            +     KA E+ + ++   C  + + Y++L+  L   GK  E   + ++M+S GCKP+V
Sbjct: 254 CKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNV 313

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V +S +I  LC  G VEEA+ L   M   E   +PD + Y+ L+   C++  +  + + L
Sbjct: 314 VTHSILIGTLCRDGKVEEAVNLLRSMK--EKGLKPDAYCYDPLIAGFCREGRLDLATEFL 371

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF--LNELAI--------RLFKRQRTS 617
             M+  GC PD+V  N  +  L    +A Q    F  L+E+           LF    +S
Sbjct: 372 EYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSS 431

Query: 618 G----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           G      +++  +L + + P   T+  ++  LCR   +  AI
Sbjct: 432 GDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAI 473



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/309 (25%), Positives = 147/309 (47%), Gaps = 29/309 (9%)

Query: 353 RVLMSMEERKFHVNEYIYS-----TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           +V +S E R+ HV  + +       L++   + GK  +++   + M++KG  P+ ++ + 
Sbjct: 50  KVRVSAETRQTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTK 109

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI G        +A  ++ E++      + F Y++L+ GF ++ +   A  +   M    
Sbjct: 110 LIKGFFNSRNIGKATRVM-EILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRG 168

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            + + V Y+++I   C  GKL  A  ++ ++L   C+P V+ Y+ +I      G ++ A+
Sbjct: 169 FLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAM 228

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           KL +EML      +PD  TYN ++  +CK+  +  + +LL S+  RGC PD++T NI L 
Sbjct: 229 KLLDEML--SKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLR 286

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                                 L  R + S G K++  M+     P   T   ++  LCR
Sbjct: 287 T---------------------LLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCR 325

Query: 648 PKRIQAAIN 656
             +++ A+N
Sbjct: 326 DGKVEEAVN 334


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  241 bits (616), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 157/568 (27%), Positives = 279/568 (49%), Gaps = 49/568 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            +Y+++   + +   +    VL  M R       ++F ++  +Y +A  +  A+R+  T+
Sbjct: 202 VYYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVL-TL 260

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +   + ++   N+ + V+++ G   +AL+F   +   +   I P+ +T+N +IK  C 
Sbjct: 261 MQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERM---QVTGIKPDIVTYNSLIKGYCD 317

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPV 263
           L  +++A++L   +P + C PD  +Y T+M  LCKE +++E   L+++M  +    P  V
Sbjct: 318 LNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQV 377

Query: 264 TFNVLINGL-----------------------------------CKNGELGRAAKLVDNM 288
           T+N LI+ L                                   C+ G +  A  LV +M
Sbjct: 378 TYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDM 437

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
           + +GC P+ VTY  ++ G C  G +D+A  +L +M    C PN V+Y  ++NGL   G++
Sbjct: 438 YSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKS 497

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
           ++   ++   EE  +  N   Y  ++ GL +EGK  +A  L ++M+EKG  P  V  + L
Sbjct: 498 LEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLL 557

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I  LC+  K  EA++ L E +N GCA N   +++++ GF + G    A+ +  DM  +  
Sbjct: 558 IQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGK 617

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + V Y+ L   L + G+L EA  +  +MLS+G  P  V Y S+IH     G V++ L 
Sbjct: 618 HPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLN 677

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L  +ML    K QP    YN ++  LC   N+  +  LL  ++      D  TC++ + +
Sbjct: 678 LLEKML----KRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMES 733

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRT 616
             +K  A         ++A R+F+R  T
Sbjct: 734 YLKKGVAIS-----AYKVACRMFRRNLT 756



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 2/207 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N + F  VI   C++G ++ A+ +  +M +    PD  TY  L D L K+ RLDEA  L+
Sbjct: 585 NVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELI 644

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M   G  PTPVT+  +I+   + G +     L++ M  +   P    YN +I  LC  
Sbjct: 645 VKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQ--PFRTVYNQVIEKLCDF 702

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           GNL++A  LL +++ +    +  T   ++   +K G A+   +V   M  R    +  + 
Sbjct: 703 GNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLC 762

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKG 397
             +   L  +GK  +A  L  + +E+G
Sbjct: 763 EKVSKKLVLDGKLVEADNLMLRFVERG 789


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 147/524 (28%), Positives = 258/524 (49%), Gaps = 33/524 (6%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A  +F  MV +  C     ++++++N +  EG    A++    +       I P   
Sbjct: 248 LDKAFEVFDRMVKD-GCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEK---GIEPTVY 303

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+ + I ++C +G VD+AI L R M  + C P + TY  ++ GL +  +++ A+ +  +M
Sbjct: 304 TYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKM 363

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+N LIN LC  G  G A K+ D M   G L N  TYN +I GL    ++
Sbjct: 364 LKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDI 423

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           +KA+ + ++M+     P  VTY T+I   +K G   +  R L  M+E     +E  Y  L
Sbjct: 424 EKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCEL 483

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ISG  K GK + A   + +M++ G  PN   Y+A+IDG C+ GK D A  +   M  NGC
Sbjct: 484 ISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGC 543

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           +A+  TY++++ G  +  +  +A +    M +     N + Y+ LI+GLC++     A  
Sbjct: 544 SASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFK 603

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M  + C P+   Y+S+I+GLC  G V+ A +L       E   +P + TY+ L++ 
Sbjct: 604 IFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL------TENGCEPTIDTYSTLVSG 657

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDL-VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
           LC++   + +  L+ +M ++G  P + + C++ +   K                      
Sbjct: 658 LCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKS--------------------- 696

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             +     +I  +M  K   P    ++ ++  LC   R + A+N
Sbjct: 697 -LKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALN 739



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 160/550 (29%), Positives = 271/550 (49%), Gaps = 24/550 (4%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ----EGLYHRALEFYNHI 180
           F    K H  +  +  F +M++     + +   + V  ++I+    E    R  +F  H 
Sbjct: 91  FYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDFL-HG 149

Query: 181 VNAKHMNILPNTL-TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++    +   TL +FN ++  + +  +V +A  ++ ++     +P + T+ T+++ LCK
Sbjct: 150 ISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCK 209

Query: 240 ENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           + ++ EAVL+ +++ Q D C P   T+  LI G C+N +L +A ++ D M   GC PN V
Sbjct: 210 KGKVQEAVLVFNKIFQFDLC-PDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSV 268

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY+TLI+GLC +G + +A+ +L+ M      P   TY   I+ L  +GR  D   ++ SM
Sbjct: 269 TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSM 328

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            ++    +   Y+ +ISGLF+ GK E A+ ++ +M+++G  PNTV Y+ALI+ LC  G+ 
Sbjct: 329 GKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRF 388

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             A +I   M  +G  ANA TY+ ++KG F      KA+ ++  M K+      V Y+ L
Sbjct: 389 GIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I    + G L  A      M    C+PD   Y  +I G C  G ++ A   F EM  L+ 
Sbjct: 449 IVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEM--LKC 506

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK-------- 590
              P+ +TY  +++  CK+  I  ++ L   M + GC   + T N  ++ L         
Sbjct: 507 GISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEA 566

Query: 591 EKL------EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
           EK       +  Q  T     L   L K   T+  FKI   M +K   P   T+  ++  
Sbjct: 567 EKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYG 626

Query: 645 LCRPKRIQAA 654
           LC+  ++ AA
Sbjct: 627 LCQEGKVDAA 636



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 172/347 (49%), Gaps = 7/347 (2%)

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M+ E +C+   +++  +++   + G    A  F+  ++      I PN  T+  +I 
Sbjct: 464 FLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKC---GISPNQWTYTAMID 520

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C+ G +D A+ LF  M    C   I TY  ++ GL K NR  EA     +M   G  P
Sbjct: 521 GYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQP 580

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             +T+  LINGLCKN     A K+   M  K CLPN  TY +LI+GLC +G +D A    
Sbjct: 581 NTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA---- 636

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           +R+  + C P   TY T+++GL + GR+ + ++++ +M+E+    +  IY +L+    K 
Sbjct: 637 ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKS 696

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            K + A++++  M  KG +P+  +Y  LI  LC V + +EA  I   ++     ++   +
Sbjct: 697 LKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVW 756

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           + L+ G  + G     ++    M   NC  +   Y +L   L + GK
Sbjct: 757 TVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 172/342 (50%), Gaps = 8/342 (2%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + T+  LI  +   G   S     Y M +      + ++  +   Y K   ++ A+ LF 
Sbjct: 477 ERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFE 536

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M +E  C  +++++N++++ + +   +  A +F           + PNT+T+  +I  +
Sbjct: 537 RM-EENGCSASIETYNAIISGLSKGNRFSEAEKF---CAKMTEQGLQPNTITYTSLINGL 592

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+    + A ++F EM  +NC P+ +TY +L+ GLC+E ++D A    + +  +GC PT 
Sbjct: 593 CKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTI 648

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T++ L++GLC+ G    A++LV+NM  KG  P+   Y +L+   C    +D A+ + + 
Sbjct: 649 DTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNL 708

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M      P+   Y  +I  L  + RA +   +  S+ +++++ +  +++ L+ GL +EG 
Sbjct: 709 MAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGD 768

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           ++  MK    M  + C P+   Y  L   L +VGK    ++I
Sbjct: 769 SDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQI 810


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 145/526 (27%), Positives = 254/526 (48%), Gaps = 21/526 (3%)

Query: 143 TMVDEFHC---KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            ++DE  C   K  V  + ++++  ++EG    A +    +V A    + PN +T++ ++
Sbjct: 335 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA---GVQPNKITYDNLV 391

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           + +C++G +D A  L ++M   +  PD  TY  +++G  + +   +A  LL EM+  G  
Sbjct: 392 RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGIS 451

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   T++++I+GLC++GE  +A+ L++ M  KG  PN   Y  LI G C +GN+  A  +
Sbjct: 452 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 511

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            D+M     +P+   Y ++I GL K+GR  +  +    M+ER    NE+ YS LI G  K
Sbjct: 512 FDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLK 571

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G  E A +L ++M++ G KPN V+Y  L++   +    ++       M++ G   +   
Sbjct: 572 NGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRI 631

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y  L+     SG    A  +   + KN  V +   YS LI GLC+     +A  +  +M 
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMS 691

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            +G  P++V Y+++I GLC +G +  A  +FN +L       P+  TY  L++  CK  +
Sbjct: 692 KKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILA--KGLVPNCVTYTSLIDGSCKVGD 749

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTA-------------LKEKLEAPQDGTDFLNEL 606
           IS++  L N M+  G  PD    ++  T              ++E            N L
Sbjct: 750 ISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNL 809

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                KR +     K++ V++ + L P   T E ++  L    ++ 
Sbjct: 810 VDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLS 855



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/548 (29%), Positives = 261/548 (47%), Gaps = 22/548 (4%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y K+  V++A  +   M D      +++  N++L  +++        +    +V A
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAP-SIRCCNALLKDLLRADAMALLWKVREFMVGA 238

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               I P+  T++ +I+  C++   D A ++  EM  R C  +  TY  L+ GLC+   +
Sbjct: 239 ---GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAV 295

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA     +M+  G  P   T+  LINGLCK+     A  L+D M      PN V Y  L
Sbjct: 296 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 355

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G   +GN D+A  ++  MVA+   PN++TY  ++ GL K+G+ +D A +L+    R  
Sbjct: 356 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQ-MDRASLLLKQMVRDS 414

Query: 364 HVNEYI-YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
           H  + I Y+ +I G F+    +DA +L  +M   G  PN   YS +I GLC+ G+P++A 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           ++L EM   G   NAF Y+ L+ G+   G    A EI+  M K N + +  CY+ LI GL
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            + G++ E+   + QM  RG  P+   YS +IHG    G +E A +L   M  L+   +P
Sbjct: 535 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM--LDTGLKP 592

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAP---- 596
           +   Y  LL +  K  +I        SM+D+G   D     I +  L     +EA     
Sbjct: 593 NDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 652

Query: 597 ----QDGT----DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
               ++G+       + L   L K       F I++ M +K + P    +  ++  LC+ 
Sbjct: 653 SGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKS 712

Query: 649 KRIQAAIN 656
             I  A N
Sbjct: 713 GDISYARN 720



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/411 (29%), Positives = 200/411 (48%), Gaps = 12/411 (2%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
           HRAL    H   A            ++++ T  + G V +A ++   M  R   P I   
Sbjct: 163 HRALSDSGHRSPA----------VLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCC 212

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             L+  L + + +     + + M   G  P   T++ LI   CK  E   A K++  M  
Sbjct: 213 NALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRE 272

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +GC  N VTYN LI GLC  G +++A      M     +P+  TYG +INGL K  R+ +
Sbjct: 273 RGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNE 332

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +L  M   +   N  +Y+ LI G  +EG A++A K+ K+M+  G +PN + Y  L+ 
Sbjct: 333 AKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVR 392

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC++G+ D A  +L +M+ +    +  TY+ +++G F       A  +  +M       
Sbjct: 393 GLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISP 452

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N   YS++IHGLC+ G+  +A  +  +M ++G KP+   Y+ +I G C  G+V  A ++F
Sbjct: 453 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 512

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           ++M   +    PD++ YN L+  L K   +  S      M +RG  P+  T
Sbjct: 513 DKM--TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 561



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 201/451 (44%), Gaps = 61/451 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y  +GD +S E ++ RM        +  +I + ++Y K+  +E+    F +M
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +D+                                        ++ +   + ++I  +  
Sbjct: 621 LDQ---------------------------------------GVMLDNRIYGILIHNLSS 641

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A ++   +      PD++ Y +L+ GLCK    ++A  +LDEM   G  P  V 
Sbjct: 642 SGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVC 701

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+GLCK+G++  A  + +++  KG +PN VTY +LI G C  G++  A  L + M+
Sbjct: 702 YNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 761

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER--KFHVNEYIYSTLISGLFKEGK 382
           A+   P+   Y  +  G    G   D  + +  +EE   + H +   ++ L+ G  K GK
Sbjct: 762 ATGITPDAFVYSVLTTGCSSAG---DLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGK 818

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++ +KL   +M +G  PN +    +I GL   GK  E   I  E+      + A  +SS
Sbjct: 819 MQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSS 878

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L       GK    +++  DM +++               C++G L +A M+   ++++ 
Sbjct: 879 LFMDMINQGK--IPLDVVDDMIRDH---------------CKEGNLDKALMLRDVIVAKS 921

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
                 +Y +++  LC  G + EAL L  EM
Sbjct: 922 APMGCSSYLAIVDNLCRKGKLSEALNLLKEM 952



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 148/357 (41%), Gaps = 63/357 (17%)

Query: 338 IINGL-VKLGRAVDGARVLMSMEERKF----HVNEYIYSTLISGLFKEGKAEDAMK---- 388
           + NGL +K+ RA     V+++   R      H +  +   L+    K G+ +DA +    
Sbjct: 140 LANGLLIKMIRAYPSPPVVLASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLM 199

Query: 389 ----------------------------LWKQ---MMEKGCKPNTVVYSALIDGLCRVGK 417
                                       LWK    M+  G  P+   YS LI+  C+V +
Sbjct: 200 MRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVRE 259

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            D A+++L EM   GC  N  TY+ L+ G   SG   +A    KDM     V +   Y  
Sbjct: 260 FDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGA 319

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI+GLC+  +  EA+ +  +M     KP+VV Y+++I G    G+ +EA K+  EM+   
Sbjct: 320 LINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVA-- 377

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
              QP+  TY+ L+  LCK   +  +  LL  M+     PD +T N+ +           
Sbjct: 378 AGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEG--------- 428

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                        F+       F+++  M    +SP   T+  ++  LC+    + A
Sbjct: 429 ------------HFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKA 473



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/366 (22%), Positives = 152/366 (41%), Gaps = 59/366 (16%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D+  Y  LI + ++SG+ ++   VL  + +   V     +  +     K    E+A  + 
Sbjct: 628 DNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGIL 687

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  +      +  +N++++ + + G    A   +N I+ AK   ++PN +T+  +I  
Sbjct: 688 DEMSKK-GVDPNIVCYNALIDGLCKSGDISYARNVFNSIL-AK--GLVPNCVTYTSLIDG 743

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C++G + NA  L+ EM      PD + Y  L  G      L++A+ L++EM + G   +
Sbjct: 744 SCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HAS 802

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL-------------- 307
             +FN L++G CK G++    KL+  +  +G +PN +T   +I GL              
Sbjct: 803 ISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFV 862

Query: 308 ---------------------------------------CLKGNLDKAVSLLDRMVASKC 328
                                                  C +GNLDKA+ L D +VA   
Sbjct: 863 ELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSA 922

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
                +Y  I++ L + G+  +   +L  M++R    +E     L++ L   G  ++   
Sbjct: 923 PMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQEHNT 982

Query: 389 LWKQMM 394
           +   M+
Sbjct: 983 VLDNML 988



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/271 (21%), Positives = 113/271 (41%), Gaps = 27/271 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG--KAHLVEEAIRLFH 142
           T+ SLI      GD  +   +   M      +   +F++     G   A  +E+A+ L  
Sbjct: 736 TYTSLIDGSCKVGDISNAFYLYNEMLATG--ITPDAFVYSVLTTGCSSAGDLEQAMFLIE 793

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M    H   ++ SFN++++   + G     L+   H++  +   ++PN LT   +I  +
Sbjct: 794 EMFLRGHA--SISSFNNLVDGFCKRGKMQETLKLL-HVIMGR--GLVPNALTIENIISGL 848

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTL-MDGL-----------------CKENRLD 244
              G +     +F E+  +  E     + +L MD +                 CKE  LD
Sbjct: 849 SEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLD 908

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +A++L D +          ++  +++ LC+ G+L  A  L+  M  +G  P+E     L+
Sbjct: 909 KALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQCLILL 968

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             L   G + +  ++LD M+  K +  +  +
Sbjct: 969 TNLHTSGYIQEHNTVLDNMLCHKWLQKDSKF 999


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 148/491 (30%), Positives = 252/491 (51%), Gaps = 7/491 (1%)

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRT--VKSFN 158
           ++++VL RM     +    S   + K     +  +EA+ L H M D+        V S+ 
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYT 200

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           +V+N   +EG   +A   Y+ +++ +   I P+ +T++ +I  +C+   +D A+++   M
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRR---ISPDVVTYSSIIAALCKGQAMDKAMEVLTTM 257

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                 P+  TY +++ G C   +  EA+  L +M+ DG  P  VT+N L++ LCKNG  
Sbjct: 258 VKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRS 317

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A K+ D+M  +G  P+  TY TL+ G   KG L +  +LLD MV +   P+   +  +
Sbjct: 318 TEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNIL 377

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I    K  +  +   V   M +   + N   Y  +I  L K G  +DAM  ++QM+++G 
Sbjct: 378 ICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGL 437

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PN +VY++LI  LC   K D+AEE++ EM++ G   N   ++S++    + G+  ++ +
Sbjct: 438 TPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEK 497

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++  M +     N + YS LI G C  GK+ EA  + + M S G KPD V Y+++I+G C
Sbjct: 498 LFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYC 557

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
               +++AL LF EM  +     P++ TYNI+L  L      + + +L   +   G   +
Sbjct: 558 RVSRMDDALALFKEM--VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLE 615

Query: 579 LVTCNIFLTAL 589
           L T NI L  L
Sbjct: 616 LSTYNIILHGL 626



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 147/547 (26%), Positives = 256/547 (46%), Gaps = 27/547 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + K         +A+ +    + E  C   V S   +L  +  E     ALE  + 
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 183

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + + +     P+ +++  VI    + G  D A   + EM  R   PD+ TY +++  LCK
Sbjct: 184 MADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              +D+A+ +L  M  +G  P  +T+N +++G C + +   A   +  M   G  P+ VT
Sbjct: 244 GQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVT 303

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN+L+  LC  G   +A  + D M      P+  TY T++ G    G  V+   +L  M 
Sbjct: 304 YNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMV 363

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
               H + ++++ LI    K+ K ++AM ++ +M + G  PN V Y A+I  LC+ G  D
Sbjct: 364 RNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVD 423

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A     +MI+ G   N   Y+SL+       K  KA E+  +M       N + ++ +I
Sbjct: 424 DAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSII 483

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           H  C++G++ E+  ++  M+  G KP+V+ YS++I G C AG ++EA KL + M  +  K
Sbjct: 484 HSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMK 543

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             PD  TYN L+N  C+ S +  ++ L   M+  G  P+++T NI L             
Sbjct: 544 --PDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG----------- 590

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI---- 655
                     LF  +RT+   ++   + +     + ST+  ++  LC+      A+    
Sbjct: 591 ----------LFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ 640

Query: 656 NKCWSNL 662
           N C ++L
Sbjct: 641 NLCLTDL 647



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 144/528 (27%), Positives = 254/528 (48%), Gaps = 20/528 (3%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  A  K   +++A+ +  TMV          ++NS+L+          A+ F   +   
Sbjct: 237 IIAALCKGQAMDKAMEVLTTMVKN-GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKM--- 292

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   + P+ +T+N ++  +C+ G    A ++F  M  R  EPDI TYCTL+ G   +  L
Sbjct: 293 RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGAL 352

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            E   LLD M  +G  P    FN+LI    K  ++  A  +   M   G  PN VTY  +
Sbjct: 353 VEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAV 412

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  LC  G++D A+   ++M+     PN + Y ++I+ L    +      +++ M +R  
Sbjct: 413 IGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGI 472

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            +N   ++++I    KEG+  ++ KL+  M+  G KPN + YS LIDG C  GK DEA +
Sbjct: 473 CLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATK 532

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L  M + G   +  TY++L+ G+    +   A+ ++K+M  +    N + Y++++ GL 
Sbjct: 533 LLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLF 592

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
              +   A+ ++  +   G + ++  Y+ ++HGLC     +EAL++F   LCL    Q +
Sbjct: 593 HTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN-LCL-TDLQLE 650

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD-----LVTCNIFLTALKEKLE---- 594
             T+NI++ AL K      + DL  +    G  P+     L+  NI    L E+L+    
Sbjct: 651 TRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFF 710

Query: 595 APQDG-----TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           + +D      +  LN +   L +R   +     + ++ +K  S + ST
Sbjct: 711 SMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 758



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 235/496 (47%), Gaps = 30/496 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  YN +  A    + P   T+ ++I   CR G +D        +  +    +  T+  
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 233 LMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           L+ GLC + R  +A+ ++L  M    C P   +  +L+ GLC       A +L+  M   
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 187

Query: 292 ---GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              G  P+ V+Y T+I+G   +G+ DKA S    M+  +  P+ VTY +II  L K G+A
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK-GQA 246

Query: 349 VDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           +D A  VL +M +     N   Y++++ G     + ++A+   K+M   G +P+ V Y++
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           L+D LC+ G+  EA +I   M   G   +  TY +L++G+   G   +   +   M +N 
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              +   +++LI    +  K+ EA +V+++M   G  P+VV Y ++I  LC +GSV++A+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
             F +M  ++    P++  Y  L+++LC       + +L+  M+DRG     +  N    
Sbjct: 427 LYFEQM--IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG-----ICLN---- 475

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                       T F N +     K  R     K+ ++M++  + P   T+  ++   C 
Sbjct: 476 ------------TIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523

Query: 648 PKRIQAAINKCWSNLY 663
             ++  A  K  S+++
Sbjct: 524 AGKMDEA-TKLLSSMF 538



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/466 (22%), Positives = 223/466 (47%), Gaps = 22/466 (4%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           IF +  K  L E  I  + T++  +  K  +   +++L+++++ G++             
Sbjct: 323 IFDSMTKRGL-EPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIH------------- 368

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P+   FN++I    +   VD A+ +F +M      P++ TY  ++  LCK   +
Sbjct: 369 ------PDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSV 422

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A+L  ++M  +G  P  + +  LI+ LC   +  +A +L+  M  +G   N + +N++
Sbjct: 423 DDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSI 482

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           IH  C +G + ++  L D MV     PN +TY T+I+G    G+  +  ++L SM     
Sbjct: 483 IHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGM 542

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TLI+G  +  + +DA+ L+K+M+  G  PN + Y+ ++ GL    +   A+E
Sbjct: 543 KPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +   +  +G      TY+ ++ G  ++    +A+ +++++   +       ++++I  L 
Sbjct: 603 LYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALL 662

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G+  EA+ ++    S G  P+   Y  M   +   G +EE  +LF  M   +     D
Sbjct: 663 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSM--EDNGCTVD 720

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
               N ++  L ++  I+ +   L+ + ++    +  T ++F+  L
Sbjct: 721 SGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 766


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 149/470 (31%), Positives = 238/470 (50%), Gaps = 23/470 (4%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            ++PNT T+ ++   +CR   ++ A   F EM     +PD      L+DG  +E  +DE 
Sbjct: 5   GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + + D M   G     +T+NVLI+GLCK G++ +AA+++  M   GC PN  T+  LI G
Sbjct: 65  LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C + N+ +A+ LLD M     +P+ V+YG +INGL          ++L  M       N
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             +YSTLI G   EG+ E+A +L   M   G  P+   Y+A+I  L + GK +EA   L 
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 244

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E+   G   +A T+ + + G+ ++GK  +A + + +M  +  + N   Y+VLI+G  + G
Sbjct: 245 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 304

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            L EA  ++  + + G  PDV   S+ IHGL   G V+EALK+F+E+   E    PDVFT
Sbjct: 305 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL--KEKGLVPDVFT 362

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           Y+ L++  CKQ  +  + +L + M  +G  P     NIF+                 N L
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEMCLKGIAP-----NIFI----------------YNAL 401

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              L K        K+ + M +K L P + T+  ++   C+ + +  A +
Sbjct: 402 VDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 158/570 (27%), Positives = 270/570 (47%), Gaps = 63/570 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I     +A  + EA   F  M  +   K    + +++++  ++EG     L   + 
Sbjct: 12  TYTIITAGLCRAKRMNEAKLTFEEM-QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDV 70

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V+     I  N +T+N++I  +C+ G ++ A ++ + M    C+P+  T+C L++G C+
Sbjct: 71  MVSC---GIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCR 127

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E+ +  A+ LLDEM+     P+ V++  +INGLC   +L  A KL++ M   G  PN V 
Sbjct: 128 EHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVV 187

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVAS-------------KCM----------------- 329
           Y+TLI G   +G +++A  LLD M  S              C+                 
Sbjct: 188 YSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQ 247

Query: 330 -----PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ VT+G  I G  K G+  + A+    M +     N  +Y+ LI+G FK G   
Sbjct: 248 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 307

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ +++ +   G  P+    SA I GL + G+  EA ++  E+   G   + FTYSSL+
Sbjct: 308 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 367

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            GF + G+  KA E+  +M       N   Y+ L+ GLC+ G ++ AR ++  M  +G +
Sbjct: 368 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 427

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD V YS+MI G C + +V EA  LF+EM       QP  F YN L++  CK+ ++  ++
Sbjct: 428 PDSVTYSTMIDGYCKSENVAEAFSLFHEM--PSKGVQPHSFVYNALVHGCCKEGDMEKAM 485

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
           +L   M+ +G          F T L              N L     K  +     ++ +
Sbjct: 486 NLFREMLQKG----------FATTLS------------FNTLIDGYCKSCKIQEASQLFQ 523

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            M+ K + P   T+  V+   C+  +++ A
Sbjct: 524 EMIAKQIMPDHVTYTTVIDWHCKAGKMEEA 553



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 145/559 (25%), Positives = 251/559 (44%), Gaps = 92/559 (16%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH-RALEFY 177
           ++F  + + Y + H +  A+ L   M ++ +   +  S+ +++N     GL H + L   
Sbjct: 116 RTFCLLIEGYCREHNMGRALELLDEM-EKRNLVPSAVSYGAMIN-----GLCHCKDLSLA 169

Query: 178 NHIVNAKHMNIL-PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           N ++     + L PN + ++ +I      G ++ A +L   M      PDI+ Y  ++  
Sbjct: 170 NKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 229

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L K  +++EA   L E+Q  G  P  VTF   I G  K G++  AAK  D M   G +PN
Sbjct: 230 LSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPN 289

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              Y  LI+G    GNL +A+S+   + A   +P+  T    I+GL+K GR  +  +V  
Sbjct: 290 NPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFS 349

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            ++E+    + + YS+LISG  K+G+ E A +L  +M  KG  PN  +Y+AL+DGLC+ G
Sbjct: 350 ELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSG 409

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
               A ++   M   G   ++ TYS+++ G+ +S    +A  ++ +M       +   Y+
Sbjct: 410 DIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYN 469

Query: 477 VLIHGLCEDG----------------------------------KLREARMVWTQMLSRG 502
            L+HG C++G                                  K++EA  ++ +M+++ 
Sbjct: 470 ALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ 529

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---------------CLEPKSQPDVFTY 547
             PD V Y+++I   C AG +EEA  LF EM                 +    +PD  TY
Sbjct: 530 IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTY 589

Query: 548 -----------------------------------NILLNALCKQSNISHSIDLLNSMMD 572
                                              ++L+ ALCK+ +++ +  LL+ M +
Sbjct: 590 GLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 649

Query: 573 RGCDPDLVTCNIFLTALKE 591
            G  P L  C+  + +  E
Sbjct: 650 LGLKPSLAACSTLVRSFHE 668



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 213/467 (45%), Gaps = 22/467 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF + I  Y+ +G           M     +     +  +   + KA  + EA+ +F  +
Sbjct: 257 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 316

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    V++ ++ ++ +++ G    AL+ ++ +   K   ++P+  T++ +I   C+
Sbjct: 317 -HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL---KEKGLVPDVFTYSSLISGFCK 372

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V+ A +L  EM ++   P+I+ Y  L+DGLCK   +  A  L D M   G  P  VT
Sbjct: 373 QGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVT 432

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ +I+G CK+  +  A  L   M  KG  P+   YN L+HG C +G+++KA++L   M+
Sbjct: 433 YSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREML 492

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
             K     +++ T+I+G  K  +  + +++   M  ++   +   Y+T+I    K GK E
Sbjct: 493 -QKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKME 551

Query: 385 DAMKLWKQMME-----------------KGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           +A  L+K+M E                 KG KP+ V Y  +I   C+     EA ++  E
Sbjct: 552 EANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 611

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           ++  G       +  L+    +     +A ++  +M +     +    S L+    E GK
Sbjct: 612 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 671

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           + EA  V+  + S G  PD      +++G  N    E+A  L  +++
Sbjct: 672 MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 176/415 (42%), Gaps = 55/415 (13%)

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           KG +PN  TY  +  GLC    +++A    + M  +   P+      +I+G ++ G   +
Sbjct: 4   KGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDE 63

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT-------- 402
             R+   M      +N   Y+ LI GL K GK E A ++ K M+  GCKPN+        
Sbjct: 64  VLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIE 123

Query: 403 ---------------------------VVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
                                      V Y A+I+GLC       A ++L +M  +G   
Sbjct: 124 GYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKP 183

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N   YS+L+ G+   G+  +A  +   M+ +    +  CY+ +I  L + GK+ EA    
Sbjct: 184 NVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYL 243

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            ++  RG KPD V + + I G    G + EA K F+EM  L+    P+   Y +L+N   
Sbjct: 244 LEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM--LDHGLMPNNPLYTVLINGHF 301

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFL----------------TALKEKLEAPQDG 599
           K  N+  ++ +   +   G  PD+ TC+ F+                + LKEK   P   
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           T   + L     K+      F++ + M  K ++P    +  +V  LC+   IQ A
Sbjct: 362 T--YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRA 414



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 115/264 (43%), Gaps = 37/264 (14%)

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M E+    N Y Y+ + +GL +  +  +A   +++M + G KP+    SALIDG  R G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            DE   I   M++ G   N  TY+ L+ G  + GK  KA EI K M    C  N   + +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA----------------- 520
           LI G C +  +  A  +  +M  R   P  V+Y +MI+GLC+                  
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 521 ------------------GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
                             G +EEA +L + M C      PD+F YN +++ L K   +  
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSC--SGVAPDIFCYNAIISCLSKAGKMEE 238

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFL 586
           +   L  +  RG  PD VT   F+
Sbjct: 239 ASTYLLEIQGRGLKPDAVTFGAFI 262



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 134/293 (45%), Gaps = 27/293 (9%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           ++F+  P+ G  +    T+ ++I  Y  S +      + + M    + V   SF++    
Sbjct: 416 KLFDGMPEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLFHEM--PSKGVQPHSFVYNALV 472

Query: 128 YG--KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           +G  K   +E+A+ LF  M+ +     T  SFN++++   +      A + +  ++  + 
Sbjct: 473 HGCCKEGDMEKAMNLFREMLQKGFA--TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQ- 529

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-----------------CEPDIY 228
             I+P+ +T+  VI   C+ G ++ A  LF+EM  RN                  +PD  
Sbjct: 530 --IMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEV 587

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY  ++   CKE+ L EA  L DE+   G        ++LI  LCK  +L  A+KL+D M
Sbjct: 588 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 647

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
              G  P+    +TL+      G +D+A  + + + +   +P+  T   ++NG
Sbjct: 648 GELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 150/528 (28%), Positives = 263/528 (49%), Gaps = 55/528 (10%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +L+  Y   G     E V+   R      +  ++  +   Y ++  + +A+RL  +M   
Sbjct: 155 TLVAGYCRDGSLGDAERVVEAARASGTANV-VTYTALIDGYCRSGRLADALRLIASM--- 210

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV-NAKHMNILPNTLTFNLVIKTVCRLG 206
                   ++N+VL  +     + +A E    ++ N+ H    PN +TF   I+  C+ G
Sbjct: 211 -PVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCH----PNEVTFATQIRAFCQNG 265

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
           L+D A++L  +MP   C PD+  Y TL++G  +  R+DEA+ LL+ M    C P  V +N
Sbjct: 266 LLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYN 322

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
             + GLC  G      +L+  M  K C PN+ T++TLI+ LC    ++ AV +L++M   
Sbjct: 323 AALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKY 382

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-----------------EERKFH----- 364
             MP+ V+Y TII+      RA D  ++L SM                 + ++++     
Sbjct: 383 GYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVEL 442

Query: 365 ----------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
                     +NE  ++ LI  L + G+ +DA+++++ M +  C P+ V YS+LI+G   
Sbjct: 443 VAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSE 502

Query: 415 VGKPDEAEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
            G     +E+ F++  +  C A+ F+Y++ +KG   + +   A E+  DM   +C+ NEV
Sbjct: 503 QG----LDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEV 558

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +++LI  LC+ G +  A  V+ QM   G  PD+  Y+++I+G    G +++ALK  + M
Sbjct: 559 TFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM 618

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            C     +PD  +YN +L  LC+      +  L+  M+ + C P+ VT
Sbjct: 619 PC-----EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVT 661



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 148/490 (30%), Positives = 251/490 (51%), Gaps = 31/490 (6%)

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +V A   +   N +T+  +I   CR G + +A++L   MPV    PD YTY T++ GLC
Sbjct: 171 RVVEAARASGTANVVTYTALIDGYCRSGRLADALRLIASMPV---APDTYTYNTVLKGLC 227

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
              + ++A  L+ EM  + C P  VTF   I   C+NG L RA +L++ M   GC P+ +
Sbjct: 228 CAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVI 287

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y+TL++G    G +D+A+ LL+ M+   C PN V Y   + GL   GR  +   ++  M
Sbjct: 288 IYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEM 344

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             +    N+  +STLI+ L +    E A+++ +QM + G  P+ V Y+ +I       + 
Sbjct: 345 VRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARA 404

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A ++L  M+   C  +  ++++++K   ++ + + AVE+   M K +C  NE+ +++L
Sbjct: 405 DDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNIL 461

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I  LC++G++++A  V+  M    C PD+V YSS+I+G    G  E A  LF  M C   
Sbjct: 462 IDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPC--- 518

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK------ 592
             + D+F+YN  L  LC  +    + +L+  M+   C P+ VT NI +++L +K      
Sbjct: 519 --RADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRA 576

Query: 593 ----LEAPQDGTD---FLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
                + P+ G     F     I  +  Q R     K +  M      P T ++  +++ 
Sbjct: 577 IDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKG 633

Query: 645 LCRPKRIQAA 654
           LCR +R + A
Sbjct: 634 LCRAERWKDA 643



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 214/429 (49%), Gaps = 22/429 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF + I+ +  +G       +L +M +      V++  + +  F  +G+   V+EA++L 
Sbjct: 253 TFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGR---VDEALKLL 309

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           +TM+    C+     +N+ L  +   G +    E    +V     +  PN  TF+ +I +
Sbjct: 310 NTML----CRPNTVCYNAALKGLCIAGRWEEVGELIAEMV---RKDCPPNDATFSTLINS 362

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+  LV+ A+++  +M      PD+ +Y T++     + R D+A+ LL  M    C P 
Sbjct: 363 LCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPD 419

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            ++FN ++  LCK      A +LV  M  K C  NE+T+N LI  LC  G +  A+ + +
Sbjct: 420 TISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFE 479

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M   +CMP+ VTY ++ING  + G       +  SM  R    + + Y+  + GL    
Sbjct: 480 LMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCR---ADIFSYNATLKGLCMAA 536

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + +DA +L   M+ + C PN V ++ LI  LC+ G  + A ++  +M   G   + FTY+
Sbjct: 537 RWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYN 596

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ G+ E G+   A++    M    C  + + Y+ ++ GLC   + ++A  + T+ML +
Sbjct: 597 ALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRK 653

Query: 502 GCKPDVVAY 510
            C P+ V +
Sbjct: 654 NCTPNEVTF 662



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 193/396 (48%), Gaps = 34/396 (8%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  ++ N+LI  LC    L  A ++++ +   G   + V++NTL+ G C  G+L  A  +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           ++   AS    N VTY  +I+G  + GR  D  R++ SM       + Y Y+T++ GL  
Sbjct: 173 VEAARASG-TANVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCC 228

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             + E A +L ++M+   C PN V ++  I   C+ G  D A E+L +M   GC  +   
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YS+L+ GF E G+  +A+++   M    C  N VCY+  + GLC  G+  E   +  +M+
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMV 345

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            + C P+   +S++I+ LC    VE A+++  +M   +    PDV +YN +++    Q+ 
Sbjct: 346 RKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQM--QKYGYMPDVVSYNTIISCFSDQAR 403

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
              ++ LL SM+   C PD ++ N  L                       L K +R    
Sbjct: 404 ADDALKLLKSML---CKPDTISFNAVLKC---------------------LCKAKRWYDA 439

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            ++V  ML+K       T+  ++  LC+  +++ AI
Sbjct: 440 VELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAI 475


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  241 bits (615), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 155/540 (28%), Positives = 262/540 (48%), Gaps = 44/540 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEF---HCKRTVKSFNSVLNVIIQEGLYHRALEF 176
           ++  I ++     L+ +A+    T++DE     C  T    + +L    + G +  A+  
Sbjct: 110 TYFPIVRSLCARGLIADAL----TVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
              +++AK   +  ++   NLV+  +C  G VD  ++L R++P   CEPDI +Y  ++ G
Sbjct: 166 L-QVLHAKGCTL--DSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKG 222

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC   R D+   L+ EM   GC P   TFN LI  LC+NG   +  + +  M   GC P+
Sbjct: 223 LCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPD 282

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              Y T+I G+C  G+ + A  +L RM +    PN V Y T++ GL    R  +   +L 
Sbjct: 283 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 342

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +    +++  ++ L+    + G  +  ++L +QM+E GC P+ + Y+ +I+G C+ G
Sbjct: 343 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 402

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
             DEA  +L  M   GC  N  +Y+ ++KG   + +   A E+   M +  C+ N V ++
Sbjct: 403 LVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFN 462

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML-- 534
            LI+ +C+ G + +A  +  QML  GC PD+++YS++I GL  AG  EEAL+L N M+  
Sbjct: 463 TLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINK 522

Query: 535 CLEPKS-------------------------------QPDVFTYNILLNALCKQSNISHS 563
            + P +                               + D   YN ++++LCK+     +
Sbjct: 523 GITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRA 582

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
           ID    M+  GC P+  T  I +  L  +    ++  D L+EL  R   R+     F IV
Sbjct: 583 IDFFAYMVSNGCMPNESTYTILIRGLASE-GLVREAQDLLSELCSRRAVRKHLVRHFGIV 641



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 233/482 (48%), Gaps = 39/482 (8%)

Query: 87  YSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVD 146
           + +++     G F+S    L  +  +   +   +   +  A  +   V+E + L   +  
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKL-P 205

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
            F C+  + S+N+VL  +     +    E    +V    +   PN  TFN +I  +CR G
Sbjct: 206 SFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMV---RVGCPPNVATFNTLIAYLCRNG 262

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN------------------------- 241
           L +   +   +MP   C PD+  Y T++DG+CK+                          
Sbjct: 263 LFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYN 322

Query: 242 ----------RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
                     R +EA  LL EM  + C    VTFN+L++  C+NG + R  +L++ M   
Sbjct: 323 TVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 382

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           GC+P+ +TY T+I+G C +G +D+AV LL  M A  C PN ++Y  ++ GL +  R VD 
Sbjct: 383 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 442

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             ++  M ++    N   ++TLI+ + K+G  E A++L KQM+  GC P+ + YS +IDG
Sbjct: 443 QELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDG 502

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L + GK +EA E+L  MIN G   N   YSS+       G+  K ++++  +       +
Sbjct: 503 LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSD 562

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y+ +I  LC+  +   A   +  M+S GC P+   Y+ +I GL + G V EA  L +
Sbjct: 563 AALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLS 622

Query: 532 EM 533
           E+
Sbjct: 623 EL 624



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 242/487 (49%), Gaps = 23/487 (4%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +       A  + + PN  T+  +++++C  GL+ +A+ +  EMP+R C      
Sbjct: 86  YCRAGQVAAARRLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPM 145

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
              +++  C+      AV  L  +   GC       N++++ +C+ G +    +L+  + 
Sbjct: 146 CHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLP 205

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC P+ V+YN ++ GLC+    D    L+  MV   C PN  T+ T+I  L + G   
Sbjct: 206 SFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFE 265

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
                L  M E     +  +Y+T+I G+ K+G  E A  +  +M   G KPN V Y+ ++
Sbjct: 266 QVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVL 325

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   + +EAE++L EM    C  +  T++ L+  F ++G   + +E+ + M ++ C+
Sbjct: 326 KGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCI 385

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + + Y+ +I+G C++G + EA M+   M + GCKP+ ++Y+ ++ GLC A    +A +L
Sbjct: 386 PDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQEL 445

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            + M  ++    P+  T+N L+N +CK+  +  +I+LL  M+  GC PDL++ +  +   
Sbjct: 446 ISHM--IQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVI--- 500

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                   DG          L K  +T    +++ VM+ K ++P T  +  +   L R  
Sbjct: 501 --------DG----------LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREG 542

Query: 650 RIQAAIN 656
           R    I 
Sbjct: 543 RTDKIIQ 549



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 203/386 (52%), Gaps = 4/386 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +TF +LI +   +G F+ +   L +M         + +  I     K    E A  +   
Sbjct: 249 ATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 308

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M   +  K  V  +N+VL  +     +  A +    +      +   + +TFN+++   C
Sbjct: 309 M-PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQE---DCPLDDVTFNILVDFFC 364

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + GLVD  I+L  +M    C PD+ TY T+++G CKE  +DEAV+LL  M   GC P  +
Sbjct: 365 QNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTI 424

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           ++ +++ GLC+      A +L+ +M  +GCLPN VT+NTLI+ +C KG +++A+ LL +M
Sbjct: 425 SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQM 484

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           + + C P+ ++Y T+I+GL K G+  +   +L  M  +    N  IYS++ S L +EG+ 
Sbjct: 485 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRT 544

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +  ++++  + +   + +  +Y+A+I  LC+  + D A +    M++NGC  N  TY+ L
Sbjct: 545 DKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTIL 604

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCV 469
           ++G    G   +A ++  ++     V
Sbjct: 605 IRGLASEGLVREAQDLLSELCSRRAV 630



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 187/419 (44%), Gaps = 60/419 (14%)

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG------------------ 306
            + LI  LC  G    AA+ +D     G     V YN +I G                  
Sbjct: 47  LSALIRSLCAAGRTADAARALDT---AGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103

Query: 307 --------------LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
                         LC +G +  A+++LD M    C         I+    + G      
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R L  +  +   ++    + ++S + ++G  ++ ++L +++   GC+P+ V Y+A++ GL
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   + D+ EE++ EM+  GC  N  T+++L+     +G   +  E    M ++ C  + 
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y+ +I G+C+DG    A  + ++M S G KP+VV Y++++ GLC+A   EEA  L  E
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KE 591
           M   +     D  T+NIL++  C+   +   I+LL  M++ GC PD++T    +    KE
Sbjct: 344 M--FQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKE 401

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
            L         ++E A+ L K     G              P T ++  V++ LCR +R
Sbjct: 402 GL---------VDE-AVMLLKNMSACG------------CKPNTISYTIVLKGLCRAER 438


>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Cucumis sativus]
          Length = 822

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 164/535 (30%), Positives = 271/535 (50%), Gaps = 18/535 (3%)

Query: 55  PQGNAKSEQ---PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEM-----VL 106
           P  N  SE+     ++ +F  T  +G ++   + F  LI  Y  S  F++L       V 
Sbjct: 141 PVLNLDSEKFHIEIANALFGLTSVVGRFEWTQA-FDLLIHVY--STQFRNLGFSCAVDVF 197

Query: 107 YRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ 166
           Y + R+      K+  F+  +  KA+  E+   +F  M  E  C   V SF +V+N + +
Sbjct: 198 YLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVM-SEGACP-DVFSFTNVINALCK 255

Query: 167 EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
            G    A+E +   +  + + I PN +T+N +I  +C+ G +DNA +L  +M V+  +P+
Sbjct: 256 GGKMENAIELF---MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPN 312

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
           + TY  L++GL K N  D+   +LDEM   G  P  V FN LI+G CK G +  A K+ D
Sbjct: 313 LKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKD 372

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M  K   P  VT  +L+ G C    ++ A + L+ +++S    +     ++++ L K  
Sbjct: 373 VMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKF 432

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           R     R    M  R F  ++ + + L+ GL K+GK  +A +LW +++EKG   + V  +
Sbjct: 433 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 492

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           ALI GLC  GK  EA  I+ EM+  G   +  TY++L+ GF   GK      + ++M K 
Sbjct: 493 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 552

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               +   Y+ L+ GLC  GKL +A  +W +  + G   ++  Y  M+ G C A  +E+ 
Sbjct: 553 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 612

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
             LFNE+  L  K + +   YNI++ A C+  N++ ++ LL +M  +G  P+  T
Sbjct: 613 ENLFNEL--LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT 665



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/502 (25%), Positives = 246/502 (49%), Gaps = 27/502 (5%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++K+ N +L+ +++   + +  E +  +         P+  +F  VI  +C+ G ++NAI
Sbjct: 208 SLKTCNFLLSSLVKANEFEKCCEVFRVMSEGA----CPDVFSFTNVINALCKGGKMENAI 263

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +LF +M      P++ TY  +++GLC+  RLD A  L ++M V G  P   T+  LINGL
Sbjct: 264 ELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGL 323

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            K     +   ++D M   G  PN V +N LI G C  GN++ A+ + D M++    P  
Sbjct: 324 IKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTS 383

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VT  +++ G  K  +       L  +      ++     +++  L K+ +   A +  K 
Sbjct: 384 VTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKM 443

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +  +P+ ++ + L+ GLC+ GK  EA E+ F ++  G  A+  T ++L+ G   +GK
Sbjct: 444 MLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGK 503

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A  I K+M +     + + Y+ LI G C +GK+     +  +M  RG +PD+  Y+ 
Sbjct: 504 LPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNF 563

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           ++ GLCN G +++A+KL++E       S  ++ TY I++   CK + I    +L N ++ 
Sbjct: 564 LLRGLCNVGKLDDAIKLWDEFKASGLIS--NIHTYGIMMEGYCKANRIEDVENLFNELLS 621

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
           +  + + +  NI + A        Q+G                 +   +++E M  K + 
Sbjct: 622 KKMELNSIVYNIIIKA------HCQNGN---------------VAAALQLLENMKSKGIL 660

Query: 633 PQTSTWERVVQELCRPKRIQAA 654
           P  +T+  ++  +C    ++ A
Sbjct: 661 PNCATYSSLIHGVCNIGLVEDA 682



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 244/533 (45%), Gaps = 70/533 (13%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF--- 176
           SF  +  A  K   +E AI LF  M ++      V ++N ++N + Q G    A E    
Sbjct: 245 SFTNVINALCKGGKMENAIELFMKM-EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEK 303

Query: 177 ------------YNHIVNA--------KHMNIL---------PNTLTFNLVIKTVCRLGL 207
                       Y  ++N         K  ++L         PN + FN +I   C++G 
Sbjct: 304 MTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGN 363

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-------QVDGCF- 259
           ++ A+++   M  +N  P   T  +LM G CK ++++ A   L+E+         D C+ 
Sbjct: 364 IEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYS 423

Query: 260 ---------------------------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
                                      P+ +   +L+ GLCK+G+   A +L   +  KG
Sbjct: 424 VVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKG 483

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              ++VT N LIHGLC  G L +A  ++  M+      + +TY  +I G    G+     
Sbjct: 484 SPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCF 543

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R+   M +R    + Y Y+ L+ GL   GK +DA+KLW +    G   N   Y  +++G 
Sbjct: 544 RLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGY 603

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+  + ++ E +  E+++     N+  Y+ ++K   ++G    A+++ ++M     + N 
Sbjct: 604 CKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNC 663

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             YS LIHG+C  G + +A+ +  +M   G  P+VV Y+++I G C  G ++ A   + E
Sbjct: 664 ATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLE 723

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           M+       P+ FTY ++++  CK  N+  + +LL  M + G  PD+VT N+ 
Sbjct: 724 MISFN--IHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVL 774



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 186/379 (49%), Gaps = 3/379 (0%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A+ +F  +  +   P + T   L+  L K N  ++   +   M    C P   +F  +IN
Sbjct: 193 AVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVIN 251

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            LCK G++  A +L   M   G  PN VTYN +I+GLC  G LD A  L ++M      P
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N  TYG +INGL+KL        VL  M    F+ N  +++ LI G  K G  E A+K+ 
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 371

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M+ K   P +V   +L+ G C+  + + AE  L E++++G + +     S++    + 
Sbjct: 372 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 431

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            + H A    K M   N   +++  ++L+ GLC+DGK  EA  +W ++L +G     V  
Sbjct: 432 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 491

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++IHGLC AG + EA ++  EML  E     D  TYN L+   C +  +     L   M
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEML--ERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 549

Query: 571 MDRGCDPDLVTCNIFLTAL 589
             RG  PD+ T N  L  L
Sbjct: 550 TKRGIQPDIYTYNFLLRGL 568



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 188/375 (50%), Gaps = 3/375 (0%)

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           SV++ + ++  YH A  F   +++    N  P+ L   +++  +C+ G    A +L+  +
Sbjct: 423 SVVHWLCKKFRYHSAFRFTKMMLSR---NFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 479

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             +       T   L+ GLC   +L EA  ++ EM   G     +T+N LI G C  G++
Sbjct: 480 LEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV 539

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
               +L + M  +G  P+  TYN L+ GLC  G LD A+ L D   AS  + N  TYG +
Sbjct: 540 EGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIM 599

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           + G  K  R  D   +   +  +K  +N  +Y+ +I    + G    A++L + M  KG 
Sbjct: 600 MEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGI 659

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PN   YS+LI G+C +G  ++A+ ++ EM   G   N   Y++L+ G+ + G+   A  
Sbjct: 660 LPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAES 719

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
            W +M   N   N+  Y+V+I G C+ G + +A  +  +M   G  PDVV Y+ + +G C
Sbjct: 720 TWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFC 779

Query: 519 NAGSVEEALKLFNEM 533
            A  ++ A K+ ++M
Sbjct: 780 KANDMDNAFKVCDQM 794



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 146/289 (50%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T+N +I   C  G V+   +L  EM  R  +PDIYTY  L+ GLC   +LD+A+ L DE
Sbjct: 524 ITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDE 583

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
            +  G      T+ +++ G CK   +     L + +  K    N + YN +I   C  GN
Sbjct: 584 FKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGN 643

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +  A+ LL+ M +   +PN  TY ++I+G+  +G   D   ++  M +  F  N   Y+ 
Sbjct: 644 VAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTA 703

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI G  K G+ + A   W +M+     PN   Y+ +IDG C++G  ++A  +L +M  +G
Sbjct: 704 LIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESG 763

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
              +  TY+ L  GF ++     A ++   MA      +E+ Y+ L+HG
Sbjct: 764 IVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 201/436 (46%), Gaps = 12/436 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T YSL+Q +  S   +  E  L  +      +   +   +     K      A R    M
Sbjct: 385 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMM 444

Query: 145 VDEFHCKRTVKSFNSVLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +      R  +  + +L +++    ++G +  A E +  ++         + +T N +I 
Sbjct: 445 LS-----RNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSP---ASKVTSNALIH 496

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C  G +  A ++ +EM  R    D  TY  L+ G C E +++    L +EM   G  P
Sbjct: 497 GLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQP 556

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T+N L+ GLC  G+L  A KL D     G + N  TY  ++ G C    ++   +L 
Sbjct: 557 DIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLF 616

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + +++ K   N + Y  II    + G      ++L +M+ +    N   YS+LI G+   
Sbjct: 617 NELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNI 676

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G  EDA  L  +M ++G  PN V Y+ALI G C++G+ D AE    EMI+     N FTY
Sbjct: 677 GLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTY 736

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G+ + G   KA  +   M ++  V + V Y+VL +G C+   +  A  V  QM +
Sbjct: 737 TVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMAT 796

Query: 501 RGCKPDVVAYSSMIHG 516
            G   D + Y++++HG
Sbjct: 797 EGLPVDEITYTTLVHG 812



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 141/260 (54%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I P+  T+N +++ +C +G +D+AI+L+ E        +I+TY  +M+G CK NR+++  
Sbjct: 554 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 613

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L +E+         + +N++I   C+NG +  A +L++NM  KG LPN  TY++LIHG+
Sbjct: 614 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 673

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G ++ A  L+D M     +PN V Y  +I G  KLG+        + M     H N+
Sbjct: 674 CNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNK 733

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + Y+ +I G  K G  E A  L  +M E G  P+ V Y+ L +G C+    D A ++  +
Sbjct: 734 FTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQ 793

Query: 428 MINNGCAANAFTYSSLMKGF 447
           M   G   +  TY++L+ G+
Sbjct: 794 MATEGLPVDEITYTTLVHGW 813



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/337 (21%), Positives = 156/337 (46%), Gaps = 37/337 (10%)

Query: 345 LGRAVDGARVLMSMEERKFHV---NEYIYSTLISGLFKEGKAED---------------- 385
           L R +DG   +++++  KFH+   N     T + G F+  +A D                
Sbjct: 132 LIRLIDGNLPVLNLDSEKFHIEIANALFGLTSVVGRFEWTQAFDLLIHVYSTQFRNLGFS 191

Query: 386 -AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+ ++  +  KG  P+    + L+  L +  + ++  E+ F +++ G   + F++++++
Sbjct: 192 CAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEV-FRVMSEGACPDVFSFTNVI 250

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
               + GK   A+E++  M K     N V Y+ +I+GLC++G+L  A  +  +M  +G +
Sbjct: 251 NALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQ 310

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P++  Y ++I+GL      ++   + +EM  +     P+V  +N L++  CK  NI  ++
Sbjct: 311 PNLKTYGALINGLIKLNFFDKVNHVLDEM--IGSGFNPNVVVFNNLIDGYCKMGNIEGAL 368

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFL--NELAIR----------L 610
            + + M+ +   P  VT    +      +++E  ++  + +  + L+I           L
Sbjct: 369 KIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWL 428

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            K+ R    F+  ++ML +   P       +V  LC+
Sbjct: 429 CKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCK 465


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/427 (31%), Positives = 236/427 (55%), Gaps = 7/427 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V ++N+VL + + +     A  F + ++  +H  + PN  T+N++++ +C  G ++ A+
Sbjct: 117 SVPAYNAVL-LALSDASLPSARRFLSSML--RH-GVAPNVYTYNILVRALCARGRLEEAV 172

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPVTFNVLING 271
            +  +M    C P+  TY TL+   C+   LD A  ++  M+ +G   P  VTFN ++NG
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK G +  A K+ D M  +G  P+ V+YNTL+ G C  G L +++++   M     +P+
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VT+ ++I+   K G       ++  M ER   +NE  ++ LI G  K+G  +DA+   +
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M + G +P+ V Y+ALI+G C++G+ D A E++ EM       +  TYS+++ G+ + G
Sbjct: 353 EMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVG 412

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
               A ++ + M K   + + + YS LI GLCE+ +L +A  ++  ML  G +PD   Y+
Sbjct: 413 NLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYT 472

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           ++I G C  G+VE+AL L +EM  +     PDV TY++L+N L K +    +  LL  + 
Sbjct: 473 TLIDGHCKEGNVEKALSLHDEM--IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLY 530

Query: 572 DRGCDPD 578
                PD
Sbjct: 531 HEDPVPD 537



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 157/509 (30%), Positives = 252/509 (49%), Gaps = 22/509 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ +L+  +  +G+    E V+  MR E        +F  +     KA  +E A ++F  
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV E      V S+N++L+   + G  H +L  ++ +       ++P+ +TF  +I   C
Sbjct: 249 MVREGLAPDVV-SYNTLLSGYCKVGCLHESLAVFSEMT---QRGLVPDVVTFTSLIHATC 304

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G ++ A+ L  +M  R    +  T+  L+DG CK+  LD+A+L ++EM+  G  P+ V
Sbjct: 305 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 364

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N LING CK G +  A +L+  M  K   P+ VTY+T+I G C  GNLD A  L  +M
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +    +P+ +TY ++I GL +  R  D   +  +M +     +E+ Y+TLI G  KEG  
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E A+ L  +M+ KG  P+ V YS LI+GL +  +  EA  +LF++ +     +   Y +L
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 544

Query: 444 M---------------KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           M               KGF   G   +A ++++ M   N   +   YS+LIHG C  G +
Sbjct: 545 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 604

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           R+A     QML  G  P+  +  S++ GL   G V EA     ++L   P +  +     
Sbjct: 605 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 664

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           I LN   K+ N+   ID+L  M   G  P
Sbjct: 665 IDLNR--KEGNVDALIDVLCGMARDGLLP 691



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 134/403 (33%), Positives = 217/403 (53%), Gaps = 4/403 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+   +N V+  +    L  +A +    M      P++YTY  L+  LC   RL+EAV +
Sbjct: 116 PSVPAYNAVLLALSDASL-PSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGLC 308
           + +M+  GC P  VT+N L+   C+ GEL  A ++V  M  +G   PN VT+N++++GLC
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G ++ A  + D MV     P+ V+Y T+++G  K+G   +   V   M +R    +  
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            +++LI    K G  E A+ L  QM E+G + N V ++ALIDG C+ G  D+A   + EM
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G   +   Y++L+ G+ + G+   A E+ ++M       + V YS +I G C+ G L
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  +ML +G  PD + YSS+I GLC    + +A +LF  ML L    QPD FTY 
Sbjct: 415 DSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQL--GVQPDEFTYT 472

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            L++  CK+ N+  ++ L + M+ +G  PD+VT ++ +  L +
Sbjct: 473 TLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSK 515



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 215/408 (52%), Gaps = 19/408 (4%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N  PN +TFN ++  +C+ G ++ A ++F EM      PD+ +Y TL+ G CK   L E+
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + +  EM   G  P  VTF  LI+  CK G L +A  LV  M  +G   NEVT+  LI G
Sbjct: 278 LAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDG 337

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHV 365
            C KG LD A+  ++ M      P+ V Y  +ING  KLGR +D AR L+  ME ++   
Sbjct: 338 FCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR-MDLARELIREMEAKRVKP 396

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   YST+ISG  K G  + A +L ++M++KG  P+ + YS+LI GLC   + ++A E+ 
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M+  G   + FTY++L+ G  + G   KA+ +  +M +   + + V YSVLI+GL + 
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYS---------------SMIHGLCNAGSVEEALKLF 530
            + +EA  +  ++      PD + Y                +++ G C  G ++EA K++
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVY 576

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             M  L+   + D   Y+IL++  C+  N+  ++     M+  G  P+
Sbjct: 577 QSM--LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 203/402 (50%), Gaps = 27/402 (6%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P+   +N ++  L  +  L  A + + +M   G  PN  TYN L+  LC +G L++A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM--EERKFHVNEYIYSTLI 374
           V ++  M  + C PN VTY T++    + G  +DGA  ++S+  EE     N   +++++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE-LDGAERVVSLMREEGNAKPNLVTFNSMV 230

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +GL K G+ E A K++ +M+ +G  P+ V Y+ L+ G C+VG   E+  +  EM   G  
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  T++SL+    ++G   +AV +   M +     NEV ++ LI G C+ G L +A + 
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M   G +P VV Y+++I+G C  G ++ A +L  EM     + +PDV TY+ +++  
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEA--KRVKPDVVTYSTIISGY 408

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           CK  N+  +  L   M+ +G  PD +T +  +  L E+                     +
Sbjct: 409 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE---------------------K 447

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           R +   ++ E MLQ  + P   T+  ++   C+   ++ A++
Sbjct: 448 RLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/376 (34%), Positives = 212/376 (56%), Gaps = 2/376 (0%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
            ++ F+EM    C P++ TY T++DG CK  R DEA   L  M + G  P  +TFN++IN
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLC++G L   ++++  M  KG +P+EVTYNTL++G C +GN  +A+ L   MV +   P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N VTY ++IN + K G           M  R    NE  Y+T+I+G  ++G  ++A ++ 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            +M   G  P+ V Y+ALI+G C +G+ +EA  +L +M+  G   +  +YS+++ GF  +
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            +  +A ++  +M   + + + V YS LI GLCE  +L EA  ++ +ML+    PD   Y
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++I+  C  G + +AL L +EM  ++    PD  TYN+L+N L KQ+    +  LL  +
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEM--IQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359

Query: 571 MDRGCDPDLVTCNIFL 586
                 P  VT N  +
Sbjct: 360 FYDDSIPSAVTYNTLI 375



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/367 (35%), Positives = 197/367 (53%), Gaps = 2/367 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LPN +T+N +I   C+L   D A    R M ++  EP++ T+  +++GLC++ RL E   
Sbjct: 15  LPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSE 74

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L EM   G  P  VT+N L+NG CK G   +A  L   M   G  PN VTY +LI+ +C
Sbjct: 75  VLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMC 134

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             GNL++A+   D+M      PNE TY TIING  + G   +  RVL  M    F  +  
Sbjct: 135 KAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIV 194

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ LI+G    G+ E+A+ L + M+ KG  P+ V YS +I G  R  + D A ++  EM
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM 254

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I      +A TYSSL++G  E  +  +A +++++M       +E  Y+ LI+  C++G L
Sbjct: 255 IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDL 314

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A  +  +M+ +G  PD V Y+ +I+GL      +EA +L  ++      S P   TYN
Sbjct: 315 NKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL--FYDDSIPSAVTYN 372

Query: 549 ILLNALC 555
            L+   C
Sbjct: 373 TLIENCC 379



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 217/415 (52%), Gaps = 17/415 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +TFN++I  +CR G +    ++  EM  +   PD  TY TL++G CKE    +A++L
Sbjct: 51  PNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVL 110

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM  +G  P  VT+  LIN +CK G L RA +  D M ++G  PNE TY T+I+G   
Sbjct: 111 HAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQ 170

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G LD+A  +L+ M  S  +P+ VTY  +ING   LGR  +   +L  M  +    +   
Sbjct: 171 QGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVS 230

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YST+ISG  +  + + A ++  +M+ K   P+ V YS+LI GLC   +  EA ++  EM+
Sbjct: 231 YSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEML 290

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                 + FTY++L+  + + G  +KA+ +  +M +   + + V Y+VLI+GL +  + +
Sbjct: 291 TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSK 350

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIH---------------GLCNAGSVEEALKLFNEML 534
           EAR +  ++      P  V Y+++I                G C  G ++EA ++F  M 
Sbjct: 351 EARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESM- 409

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +    +P+   YN++++  C+  N+  +  L   M+     P  VT    + AL
Sbjct: 410 -INKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKAL 463



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/346 (33%), Positives = 185/346 (53%), Gaps = 2/346 (0%)

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM+ +GC P  VT+N +I+G CK      A   + +M LKG  PN +T+N +I+GLC  G
Sbjct: 8   EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDG 67

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            L +   +L  M     +P+EVTY T++NG  K G       +   M       N   Y+
Sbjct: 68  RLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYT 127

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           +LI+ + K G    AM+ + QM  +G  PN   Y+ +I+G  + G  DEA  +L EM  +
Sbjct: 128 SLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRS 187

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  TY++L+ G    G+  +A+ + +DM     + + V YS +I G   + +L  A
Sbjct: 188 GFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRA 247

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +  +M+ +   PD V YSS+I GLC    + EA  +F EML +  K  PD FTY  L+
Sbjct: 248 FQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTI--KLPPDEFTYTTLI 305

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
           NA CK+ +++ ++ L + M+ +G  PD VT N+ +  L ++  + +
Sbjct: 306 NAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKE 351



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 224/441 (50%), Gaps = 20/441 (4%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++N   +EG +H+AL  +  +V      + PN +T+  +I ++C+ G ++ A++ F
Sbjct: 90  TYNTLVNGYCKEGNFHQALVLHAEMVRN---GLSPNVVTYTSLINSMCKAGNLNRAMEFF 146

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M VR   P+  TY T+++G  ++  LDEA  +L+EM   G  P+ VT+N LING C  
Sbjct: 147 DQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVL 206

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G +  A  L+ +M  KG LP+ V+Y+T+I G      LD+A  +   M+    +P+ VTY
Sbjct: 207 GRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTY 266

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++I GL +  R  +   +   M   K   +E+ Y+TLI+   KEG    A+ L  +M++
Sbjct: 267 SSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQ 326

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM----------- 444
           KG  P+ V Y+ LI+GL +  +  EA  +L ++  +    +A TY++L+           
Sbjct: 327 KGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSA 386

Query: 445 ----KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
               KGF   G   +A ++++ M   N   NE  Y+V+IHG C  G + +A  ++ +M+ 
Sbjct: 387 VALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVH 446

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
               P  V   +++  L   G   E  ++  ++  L      D     +L+    K+ N+
Sbjct: 447 VDFVPHTVTVLALVKALFTEGMDGELNEVIGDI--LRSCKLTDAELSKVLVEINQKEGNM 504

Query: 561 SHSIDLLNSMMDRGCDPDLVT 581
               +LL  M   G  P   T
Sbjct: 505 DMVFNLLTEMAKDGLIPSTGT 525



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 206/443 (46%), Gaps = 19/443 (4%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
            Y   + T+ +L+  Y   G+F    ++   M R        ++  +  +  KA  +  A
Sbjct: 83  GYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRA 142

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           +  F  M     C    +++ +++N   Q+GL   A    N +  +     +P+ +T+N 
Sbjct: 143 MEFFDQMHVRGLCPNE-RTYTTIINGFAQQGLLDEAYRVLNEMTRS---GFIPSIVTYNA 198

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I   C LG ++ AI L ++M  +   PD+ +Y T++ G  +   LD A  +  EM    
Sbjct: 199 LINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKS 258

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  VT++ LI GLC+   L  A  +   M      P+E TY TLI+  C +G+L+KA+
Sbjct: 259 VLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKAL 318

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS-- 375
            L D M+    +P+ VTY  +INGL K  R+ +  R+L+ +       +   Y+TLI   
Sbjct: 319 HLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENC 378

Query: 376 -------------GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
                        G   +G  ++A ++++ M+ K  KPN  +Y+ +I G CR+G   +A 
Sbjct: 379 CNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAY 438

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           ++  EM++     +  T  +L+K  F  G   +  E+  D+ ++  + +     VL+   
Sbjct: 439 KLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEIN 498

Query: 483 CEDGKLREARMVWTQMLSRGCKP 505
            ++G +     + T+M   G  P
Sbjct: 499 QKEGNMDMVFNLLTEMAKDGLIP 521



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 146/304 (48%), Gaps = 23/304 (7%)

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
           G R    ME      N   Y+T+I G  K  + ++A    + M  KG +PN + ++ +I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLCR G+  E  E+L EM   G   +  TY++L+ G+ + G  H+A+ +  +M +N    
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N V Y+ LI+ +C+ G L  A   + QM  RG  P+   Y+++I+G    G ++EA ++ 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           NEM        P + TYN L+N  C    +  +I LL  M+ +G  PD+V+ +  ++   
Sbjct: 182 NEM--TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFA 239

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                                + Q     F++   M+ K + P   T+  ++Q LC  +R
Sbjct: 240 ---------------------RNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRR 278

Query: 651 IQAA 654
           +  A
Sbjct: 279 LTEA 282



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 169/353 (47%), Gaps = 16/353 (4%)

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
            +     M  + C+PN VTY T+I+G  KL R  +    L SM  +    N   ++ +I+
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL ++G+ ++  ++  +M  KG  P+ V Y+ L++G C+ G   +A  +  EM+ NG + 
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  TY+SL+    ++G  ++A+E +  M       NE  Y+ +I+G  + G L EA  V 
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M   G  P +V Y+++I+G C  G +EEA+ L  +M+       PDV +Y+ +++   
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMV--GKGVLPDVVSYSTIISGFA 239

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           +   +  +  +   M+ +   PD VT +  +  L E+    +    F   L I+L   + 
Sbjct: 240 RNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEF 299

Query: 616 T--------------SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           T              +    + + M+QK   P   T+  ++  L +  R + A
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 23/161 (14%)

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           + +M   GC P+VV Y++MI G C     +EA      M       +P++ T+N+++N L
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGL--KGLEPNLITFNMIINGL 63

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           C+   +  + ++L  M  +G  PD VT N  +    ++        +F   L +      
Sbjct: 64  CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKE-------GNFHQALVLH----- 111

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                      M++  LSP   T+  ++  +C+   +  A+
Sbjct: 112 ---------AEMVRNGLSPNVVTYTSLINSMCKAGNLNRAM 143



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 104/242 (42%), Gaps = 22/242 (9%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E ++  +  AY K   + +A+ L   M+ +      V ++N ++N + ++    R+ E  
Sbjct: 298 EFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAV-TYNVLINGLNKQA---RSKEAR 353

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRL---------------GLVDNAIQLFREMPVRN 222
             ++   + + +P+ +T+N +I+  C +               GL+D A Q+F  M  +N
Sbjct: 354 RLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKN 413

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
            +P+   Y  ++ G C+   + +A  L  EM      P  VT   L+  L   G  G   
Sbjct: 414 HKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELN 473

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +++ ++     L +      L+     +GN+D   +LL  M     +P   + GT  N +
Sbjct: 474 EVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIP---STGTPTNAI 530

Query: 343 VK 344
            +
Sbjct: 531 AR 532


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 167/599 (27%), Positives = 273/599 (45%), Gaps = 53/599 (8%)

Query: 39  FSVRSAVSSNKQMETEPQGNAKSEQPFSDEI--FNSTPKLGSYQLGDSTFYSLIQHYANS 96
           F    A  SN       +GN  S     +++  F   P L  Y        +LI      
Sbjct: 316 FVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYN-------ALINSMCKD 368

Query: 97  GDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKS 156
           G     E +   M  +     + ++  +  ++ K   ++ A+     M  E   K TV  
Sbjct: 369 GKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT-EVGIKATVYP 427

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           ++S+++   + G    A   ++ ++      + PN + +  +I   C+ G + NA +L+ 
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIAN---GLKPNVVIYTSLISGYCKEGELHNAFRLYH 484

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM  +   P+ YT+  L+ GLC  NR+ EA  L  EM      P  VT+NVLI G CK G
Sbjct: 485 EMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEG 544

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
              RA +L+D M  KG +P+  TY  LI GLC  G + +A   ++ +   +   NE+ + 
Sbjct: 545 NTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFS 604

Query: 337 TIINGLVKLGR---AVDGAR--------------------------------VLMSMEER 361
            +++G  K GR   A+D  R                                +L  M ++
Sbjct: 605 ALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQ 664

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               +  +Y+T+I    K G  + A  LW  M+ +GC PN V Y+ALI+GLC++G  D+A
Sbjct: 665 GLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKA 724

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           E +  EM+ +    N  TY+  +      G   KA+++  D+     + N V Y++LI G
Sbjct: 725 ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRG 783

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C+ G+++EA  V   M+  G  PD ++YS++I+  C  G ++EA+KL+  ML       
Sbjct: 784 FCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML--NRGVN 841

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN--IFLTALKEKLEAPQD 598
           PD   YN L+   C    ++ + +L + MM RG  P+  T N  I  T L   + +  D
Sbjct: 842 PDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 900



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 156/519 (30%), Positives = 250/519 (48%), Gaps = 30/519 (5%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +F    ++  +N+++N + ++G    A   +N   N  H  + PN +T++++I + C+
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFN---NMGHKGLFPNDVTYSILIDSFCK 402

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +D A+    +M     +  +Y Y +L+ G CK  +L  A  L DEM  +G  P  V 
Sbjct: 403 RGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVI 462

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+G CK GEL  A +L   M  KG  PN  T+  LI GLC    + +A  L   MV
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +PNEVTY  +I G  K G  V    +L  M E+    + Y Y  LISGL   G+  
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +    +  +  K N + +SAL+ G C+ G+ D+A +   EM+  G A +   YS L+
Sbjct: 583 EAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLI 642

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G          +++ K M       + V Y+ +I    + G L+ A  +W  M+S GC 
Sbjct: 643 YGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCL 702

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P+VV Y+++I+GLC  G +++A  L  EML     S P+  TY   L+ L  + NI  +I
Sbjct: 703 PNVVTYTALINGLCKIGLMDKAELLCREMLA--SNSLPNQNTYACFLDYLTSEGNIEKAI 760

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF-KRQRTSGGFKIV 623
            L + +++ G   + VT NI                       IR F K  R     +++
Sbjct: 761 QLHDVLLE-GFLANTVTYNIL----------------------IRGFCKLGRIQEAAEVL 797

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
             M+   +SP   ++  ++ E CR   ++ AI K W ++
Sbjct: 798 VNMIDSGISPDCISYSTIIYEYCRRGDLKEAI-KLWESM 835



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/468 (29%), Positives = 233/468 (49%), Gaps = 16/468 (3%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N+ I+ +C+   V  A+++   +  +    D+ TYCTL+ GLCK    +    +++EM
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P+    + L++GL K G +G A  LV+ +   G  P+   YN LI+ +C  G L
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A SL + M      PN+VTY  +I+   K G+       L  M E       Y YS+L
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ISG  K GK   A  L+ +M+  G KPN V+Y++LI G C+ G+   A  +  EM   G 
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           + N +T+++L+ G   + +  +A +++ +M + N + NEV Y+VLI G C++G    A  
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  +M+ +G  PD   Y  +I GLC+ G V EA +  N++   + K     F+   LL+ 
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFS--ALLHG 609

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK---------LEAPQD-GTDFL 603
            CK+  +  ++D    M+ RG   DLV  ++ +  +  +         L+   D G    
Sbjct: 610 YCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPD 669

Query: 604 NELAIRLFKRQRTSGGFKIV----EVMLQKFLSPQTSTWERVVQELCR 647
           N L   +      +G  K+     ++M+ +   P   T+  ++  LC+
Sbjct: 670 NVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCK 717



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 151/574 (26%), Positives = 257/574 (44%), Gaps = 51/574 (8%)

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHLVEE-----------AIRLFHTMVDEFHCKRTV 154
           + R  +  RV L  SFI       K H VE+           A+R F+ +    +   + 
Sbjct: 37  IVRGNQSWRVALNNSFI---SQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHST 93

Query: 155 KSFNSVLNVIIQEGLYHRALE--------------FYNHIVNAKHMNILPNTLTFNLVIK 200
            SF  +++ ++Q  LY  A                 +   +++        TL F+L+I+
Sbjct: 94  TSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQ 153

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
           T  +     + + + R M      P I T   +++GL +  +   A+ L DE+   G  P
Sbjct: 154 TYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRP 213

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
               +  ++  LC+  +  RA +++  M   GC  +  TYN  I GLC    + +AV + 
Sbjct: 214 DVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIK 273

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + +       +  TY T++ GL K+     G  ++  M E  F  +E   S L+ GL K+
Sbjct: 274 NLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKK 333

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G    A  L  ++ + G  P+  VY+ALI+ +C+ GK DEAE +   M + G   N  TY
Sbjct: 334 GNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           S L+  F + GK   A+     M +         YS LI G C+ GKLR A+ ++ +M++
Sbjct: 394 SILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G KP+VV Y+S+I G C  G +  A +L++EM        P+ +T+  L++ LC  + +
Sbjct: 454 NGLKPNVVIYTSLISGYCKEGELHNAFRLYHEM--TGKGISPNTYTFTALISGLCHANRM 511

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
           + +  L   M++    P+ VT N+ +                         K   T   F
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEG---------------------HCKEGNTVRAF 550

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           ++++ M++K L P T T+  ++  LC   R+  A
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 243/444 (54%), Gaps = 11/444 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + ++N+++  +  E   HR  E     +  + +   P+ +T+  +IK +C  G ++ A++
Sbjct: 139 IVTYNTLIKGLCME---HRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALK 195

Query: 214 LFREMPVR------NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           L +EM         NC+P++ TY  ++DGLCK  R DEA  L +EM+  G  P+ +++N 
Sbjct: 196 LHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNS 255

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI+G C  G+   + +L+D M  +G  P+ VT+N LI  LC +G + +A  LL  M+ S 
Sbjct: 256 LIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG 315

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
            +P+ VTY ++I G   +G       + +SM  +    +   Y+ LI+G  K  K E+AM
Sbjct: 316 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 375

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           KL+ +M+  G +PN + Y +L+ G+   GK D+A+++   M  +G A N++TY   + G 
Sbjct: 376 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 435

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            ++    +A++++ ++  +N        + LI GLC+ GKL  A  ++ ++ + G +P+V
Sbjct: 436 CKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 495

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V Y+ MIHG C  G V++A  L  +M        PD+ TYN L+    + + +   + LL
Sbjct: 496 VTYTIMIHGFCREGQVDKANVLIQKMEA--NGCTPDIITYNTLMRGFYESNKLEEVVQLL 553

Query: 568 NSMMDRGCDPDLVTCNIFLTALKE 591
           + M  +   PD +TC+I +  L +
Sbjct: 554 HRMAQKDVSPDAITCSIVVDMLSK 577



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 258/540 (47%), Gaps = 60/540 (11%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            AL F++ ++ +      P+  +FN ++  + ++        L+ +M +     D  T  
Sbjct: 52  HALHFFHLMMRSTPT---PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLN 108

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L++ LC  NRL E       +   G  P  VT+N LI GLC    +  A +L   M   
Sbjct: 109 ILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKL 168

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS------KCMPNEVTYGTIINGLVKL 345
           GC P+ VTY TLI GLC  GN++ A+ L   M+         C PN +TY  I++GL K+
Sbjct: 169 GCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKV 228

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           GR  +  ++   M+ +    +   Y++LI G    GK E++ +L  +M+++G +P+ V +
Sbjct: 229 GREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTF 288

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + LID LC+ GK  EA+++L  MI +G   +  TY+SL++GF   G  + A E++  M  
Sbjct: 289 NVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 348

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
             C  + + Y+VLI+G  +  K+ EA  ++ +ML  G +P+V+ Y S++ G+  AG V++
Sbjct: 349 KGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDD 408

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALC---------------KQSNISHSIDLLNSM 570
           A KLF+ M         + +TY I L+ LC               K SN    I+ LN +
Sbjct: 409 AKKLFSVMKA--HGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCL 466

Query: 571 MD--------------------RGCDPDLVTCNIFL------------TALKEKLEAPQD 598
           +D                     G +P++VT  I +              L +K+EA   
Sbjct: 467 IDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGC 526

Query: 599 GTDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             D +  N L    ++  +     +++  M QK +SP   T   VV  L + ++ Q  ++
Sbjct: 527 TPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLH 586



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 211/445 (47%), Gaps = 39/445 (8%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN- 182
           + K     H + EA RLF  M  +  C   V ++ +++  +   G  + AL+ +  ++N 
Sbjct: 145 LIKGLCMEHRISEATRLFLRM-QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLND 203

Query: 183 --AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
                +N  PN +T+N+++  +C++G  D A QLF EM  +   P I +Y +L+ G C  
Sbjct: 204 ISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCA 263

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            + +E+  LLDEM   G  P  VTFNVLI+ LCK G++  A KL+  M   G +P+ VTY
Sbjct: 264 GKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTY 323

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+LI G C+ G+L+ A  L   M +  C P+ ++Y  +ING  K  +  +  ++   M  
Sbjct: 324 NSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLL 383

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY--------------- 405
                N   Y +L+ G+F  GK +DA KL+  M   G   N+  Y               
Sbjct: 384 VGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFE 443

Query: 406 --------------------SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
                               + LIDGLC+ GK + A E+  ++ N G   N  TY+ ++ 
Sbjct: 444 AMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIH 503

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           GF   G+  KA  + + M  N C  + + Y+ L+ G  E  KL E   +  +M  +   P
Sbjct: 504 GFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSP 563

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLF 530
           D +  S ++  L      +E L L 
Sbjct: 564 DAITCSIVVDMLSKDEKYQECLHLL 588



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 233/474 (49%), Gaps = 24/474 (5%)

Query: 203 CRLGLVD--NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
           C+ G V   +A+  F  M      P + ++  L+ GL K     +   L ++M++ G   
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T N+L+N LC    L         +  +G  PN VTYNTLI GLC++  + +A  L 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM--EERKFHV----NEYIYSTLI 374
            RM    C P+ VTYGT+I GL   G      ++   M  +  ++ +    N   Y+ ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            GL K G+ ++A +L+++M  +G  P+ + Y++LI G C  GK +E++ +L EM++ G  
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  T++ L+    + GK  +A ++   M ++  V + V Y+ LI G C  G L  AR +
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           +  M S+GC+PDV++Y+ +I+G      VEEA+KL+NEML +    +P+V TY+ LL  +
Sbjct: 343 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLV--GKRPNVITYDSLLKGI 400

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--------KLEAPQDGTDF---- 602
                +  +  L + M   G   +  T  IFL  L +        KL      ++F    
Sbjct: 401 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEI 460

Query: 603 --LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             LN L   L K  +    +++ E +  +   P   T+  ++   CR  ++  A
Sbjct: 461 ENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKA 514



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 46/317 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ SLI+ +   GD  S   +   M     E  V+   S+  +   Y K   VEEA++L+
Sbjct: 322 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVI---SYNVLINGYSKTLKVEEAMKLY 378

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           + M+                                  +V  +     PN +T++ ++K 
Sbjct: 379 NEML----------------------------------LVGKR-----PNVITYDSLLKG 399

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +   G VD+A +LF  M       + YTY   +DGLCK + L EA+ L  E++       
Sbjct: 400 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 459

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
               N LI+GLCK G+L  A +L + +  +G  PN VTY  +IHG C +G +DKA  L+ 
Sbjct: 460 IENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 519

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +M A+ C P+ +TY T++ G  +  +  +  ++L  M ++    +    S ++  L K+ 
Sbjct: 520 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDE 579

Query: 382 KAEDAMKLWKQM-MEKG 397
           K ++ + L  +  ++KG
Sbjct: 580 KYQECLHLLPRFPIQKG 596


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 166/628 (26%), Positives = 283/628 (45%), Gaps = 62/628 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ + ++ +  + DF + + V   MRR    + E ++  +     ++  VEEA      M
Sbjct: 247 TYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEM 306

Query: 145 VD-------------------------------EFHC---KRTVKSFNSVLNVIIQEGLY 170
           VD                               E  C   K  V  + ++++  ++EG  
Sbjct: 307 VDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKA 366

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
             A +  N +++A    + PN + ++ +I+ +C++G +  A +L  EM      PD +TY
Sbjct: 367 AEAFDILNEMISA---GVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTY 423

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             LM G  +    D A  LL+EM+  G  P   T+ ++INGLC+NGE   A  L++ M  
Sbjct: 424 HPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMIS 483

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G  PN   Y  LI G   +G++  A   L+ M  +  +P+   Y ++I GL  +GR  +
Sbjct: 484 EGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEE 543

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
                  +++R    +E+ YS LI G  K    E A +L +QM+  G KPN   Y+ L++
Sbjct: 544 AEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLE 603

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G  +    ++   IL  M+ +G   +   Y  +++    S     A  +  ++ KN  V 
Sbjct: 604 GYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVP 663

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +   YS LI GLC+   + +A  +  +M   G +P +V Y+++I G C +G +  A  +F
Sbjct: 664 DLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVF 723

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           + +L       P+  TY  L++  CK  +I+ + DL   M+DRG  PD    N+  T   
Sbjct: 724 DSILA--KGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCS 781

Query: 591 EKLEAPQDGTDFLNE-------LAIRLF--------KRQRTSGGFKIVEVMLQKFLSPQT 635
           +  +  Q    FL E         + LF        KR R     K++ VM+ + + P  
Sbjct: 782 DAADLEQ--ALFLTEEMFNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNA 839

Query: 636 STWERVVQE------LCRPKRIQAAINK 657
            T E V+ E      LC   R+ A + +
Sbjct: 840 QTVENVITEFGKAGKLCEAHRVFAELQQ 867



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/392 (32%), Positives = 202/392 (51%), Gaps = 2/392 (0%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I P+  T++  ++  C+    D A ++F EM  R+C  +  TY  ++ GLC+   ++EA
Sbjct: 240 GIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEA 299

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
               +EM   G  P   T+  L+NGLCK G L  A  L+D M   G  PN V Y TL+ G
Sbjct: 300 FGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
              +G   +A  +L+ M+++   PN++ Y  +I GL K+G+    +++L  M +     +
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + Y  L+ G F+    + A +L  +M   G  PN   Y  +I+GLC+ G+  EA  +L 
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EMI+ G   NAF Y+ L+ G  + G    A E  ++M K N + +  CY+ LI GL   G
Sbjct: 480 EMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVG 539

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           ++ EA   + Q+  RG  PD   YS +IHG C   ++E+A +L  +M  L    +P+  T
Sbjct: 540 RIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQM--LNSGLKPNADT 597

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           Y  LL    K ++      +L SM+  G  PD
Sbjct: 598 YTDLLEGYFKSNDHEKVSSILQSMLGSGDKPD 629



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 154/317 (48%), Gaps = 4/317 (1%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
              +VL++   KNG +  AA++V  M   G  P     N L+  L     ++    L   
Sbjct: 176 AVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGF 235

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEERKFHVNEYIYSTLISGLFKEG 381
           M  +   P+  TY T +    K  R  D A+ V   M  R   +NE  Y+ +ISGL + G
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCK-ARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             E+A    ++M++ G  P+   Y AL++GLC+ G+  EA+ +L EM  +G   N   Y+
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ GF + GK  +A +I  +M       N++ Y  LI GLC+ G+L  A  +  +M+  
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKV 414

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G +PD   Y  ++ G       + A +L NEM        P+ +TY I++N LC+     
Sbjct: 415 GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM--RNSGILPNAYTYGIMINGLCQNGESK 472

Query: 562 HSIDLLNSMMDRGCDPD 578
            + +LL  M+  G  P+
Sbjct: 473 EAGNLLEEMISEGLKPN 489



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 206/496 (41%), Gaps = 89/496 (17%)

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           + VL++ ++   G  PT    N L+  L +   +    KL   M   G  P+  TY+T +
Sbjct: 196 QVVLMMGDL---GLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFL 252

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
              C   + D A  + + M    C  NEVTY  +I+GL + G   +       M +    
Sbjct: 253 EAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLS 312

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            + + Y  L++GL K G+ ++A  L  +M   G KPN VVY+ L+DG  + GK  EA +I
Sbjct: 313 PDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDI 372

Query: 425 LFEMINNGCAAN-----------------------------------AFTYSSLMKGFFE 449
           L EMI+ G   N                                    FTY  LM+G F+
Sbjct: 373 LNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQ 432

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK----- 504
                 A E+  +M  +  + N   Y ++I+GLC++G+ +EA  +  +M+S G K     
Sbjct: 433 HYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFM 492

Query: 505 ------------------------------PDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
                                         PD+  Y+S+I GL   G +EEA + + ++ 
Sbjct: 493 YAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQV- 551

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL-------- 586
             +    PD FTY+ L++  CK  N+  +  LL  M++ G  P+  T    L        
Sbjct: 552 -QKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSND 610

Query: 587 -----TALKEKLEAPQDGTDFLNELAIR-LFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
                + L+  L +     + +  + IR L + +     F ++  + +  L P    +  
Sbjct: 611 HEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSS 670

Query: 641 VVQELCRPKRIQAAIN 656
           ++  LC+   ++ A+ 
Sbjct: 671 LISGLCKMADMEKAVG 686



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 163/382 (42%), Gaps = 38/382 (9%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+   +  L   LC   +  +A  LL +M+ +   P  V        L  + RA+  +  
Sbjct: 113 PSADAFARLAASLCAASHFPQANGLLHQMILAHPHPPLV--------LASIQRAIQDSDA 164

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
                         +   L+    K G    A ++   M + G  P     + L+  L R
Sbjct: 165 RSPSPSPSHSTA--VLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLR 222

Query: 415 VGKPDEAEEILFE----MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
                +A E++++    M   G   + +TYS+ ++   ++     A +++++M + +C  
Sbjct: 223 A----DAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAM 278

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           NEV Y+V+I GLC  G + EA     +M+  G  PD   Y ++++GLC  G ++EA  L 
Sbjct: 279 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALL 338

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           +EM C   K  P+V  Y  L++   K+   + + D+LN M+  G  P+ +  +  +  L 
Sbjct: 339 DEMSCSGLK--PNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLC 396

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRT----------------SGGFKIVEVMLQKFLSPQ 634
            K+      +  LNE+ I++  R  T                 G F+++  M    + P 
Sbjct: 397 -KIGQLGRASKLLNEM-IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPN 454

Query: 635 TSTWERVVQELCRPKRIQAAIN 656
             T+  ++  LC+    + A N
Sbjct: 455 AYTYGIMINGLCQNGESKEAGN 476



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 129/313 (41%), Gaps = 40/313 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y  + + +  + +L +M          ++  + + Y K++  E+   +  +M
Sbjct: 562 TYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM 621

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIKTVC 203
           +         K  N +  ++I+       +E    ++     N ++P+   ++ +I  +C
Sbjct: 622 LGSGD-----KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLC 676

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           ++  ++ A+ L  EM     EP I  Y  L+DG C+   +  A  + D +   G  P  V
Sbjct: 677 KMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCV 736

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN---------------------- 301
           T+  LI+G CKNG++  A  L  +M  +G  P+   YN                      
Sbjct: 737 TYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM 796

Query: 302 ------------TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
                       TL+ G C +G L +   LL  M+  + +PN  T   +I    K G+  
Sbjct: 797 FNRGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLC 856

Query: 350 DGARVLMSMEERK 362
           +  RV   ++++K
Sbjct: 857 EAHRVFAELQQKK 869


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 162/545 (29%), Positives = 265/545 (48%), Gaps = 19/545 (3%)

Query: 49  KQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYR 108
           K+++   +   +S  P +   F S      ++    TF  +I+  A  G   S++ +L +
Sbjct: 42  KELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQ 101

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
           M+ +     E  FI +   Y +  L E A+ +F+  + EF C  +VK +N VL+ ++ E 
Sbjct: 102 MKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR-IKEFGCDPSVKIYNHVLDTLLGE- 159

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
             +R    Y    + K     PN  T+N+++K +C+   VD A +L  EM  + C PD  
Sbjct: 160 --NRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAV 217

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           +Y T++  +C+   + E   L +  +     P    +N LINGLCK  +   A +L+  M
Sbjct: 218 SYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREM 272

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             KG  PN ++Y+TLI+ LC  G ++ A S L +M+   C PN  T  +++ G    G  
Sbjct: 273 VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTT 332

Query: 349 VDGARVLMSMEERKFHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
            D   +   M  R F +  N   Y+TL+ G    G    A+ ++  M E GC PN   Y 
Sbjct: 333 FDALDLWNQMI-RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           +LI+G  + G  D A  I  +M+ +GC  N   Y+++++      K  +A  + + M+K 
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG-CKPDVVAYSSMIHGLCNAGSVEE 525
           NC  +   ++  I GLC+ G+L  A  V+ QM  +  C P++V Y+ ++ GL  A  +EE
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511

Query: 526 ALKLFNE--MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           A  L  E  M  +E  S     TYN LL+  C       ++ L+  MM  G  PD +T N
Sbjct: 512 AYGLTREIFMRGVEWSSS----TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMN 567

Query: 584 IFLTA 588
           + + A
Sbjct: 568 MIILA 572



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 165/524 (31%), Positives = 249/524 (47%), Gaps = 45/524 (8%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE- 147
           L+    N  + K L+ V+ R+R+E  V L   F   FK+   ++L +     F  M+ + 
Sbjct: 31  LLTESPNHAEIKELD-VVKRLRQESCVPLALHF---FKSIANSNLFKHTPLTFEVMIRKL 86

Query: 148 --------------------FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
                               FHC   +  F SV++V  Q GL  RA+E +  I   K   
Sbjct: 87  AMDGQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVGLAERAVEMFYRI---KEFG 141

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQL----FREMPVRNCEPDIYTYCTLMDGLCKENRL 243
             P+   +N V+ T+    L +N IQ+    +R+M     EP+++TY  L+  LCK N++
Sbjct: 142 CDPSVKIYNHVLDTL----LGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A  LL EM   GC P  V++  +I+ +C+ G +    +L +        P    YN L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNAL 252

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I+GLC + +   A  L+  MV     PN ++Y T+IN L   G+       L  M +R  
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKPDEAE 422
           H N Y  S+L+ G F  G   DA+ LW QM+   G +PN V Y+ L+ G C  G   +A 
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +   M   GC+ N  TY SL+ GF + G    AV IW  M  + C  N V Y+ ++  L
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C   K +EA  +   M    C P V  +++ I GLC+AG ++ A K+F +M   + +  P
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME-QQHRCPP 491

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           ++ TYN LL+ L K + I  +  L   +  RG +    T N  L
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 238/500 (47%), Gaps = 31/500 (6%)

Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR--NC 223
           QE     AL F+  I N+      P  LTF ++I+ +   G VD+   L ++M ++  +C
Sbjct: 52  QESCVPLALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
             D++   +++    +    + AV +   ++  GC P+   +N +++ L     +     
Sbjct: 110 SEDLFI--SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYM 167

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           +  +M   G  PN  TYN L+  LC    +D A  LL  M    C P+ V+Y T+I+ + 
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           ++G   +G  +       +F     +Y+ LI+GL KE   + A +L ++M+EKG  PN +
Sbjct: 228 EVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            YS LI+ LC  G+ + A   L +M+  GC  N +T SSL+KG F  G    A+++W  M
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342

Query: 464 AKNNCVY-NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
            +   +  N V Y+ L+ G C  G + +A  V++ M   GC P++  Y S+I+G    GS
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           ++ A+ ++N+ML       P+V  Y  ++ ALC+ S    +  L+  M    C P + T 
Sbjct: 403 LDGAVYIWNKML--TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460

Query: 583 NIFLTAL----------------KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           N F+  L                +++   P +   + NEL   L K  R    + +   +
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTY-NELLDGLAKANRIEEAYGLTREI 519

Query: 627 LQKFLSPQTSTWERVVQELC 646
             + +   +ST+  ++   C
Sbjct: 520 FMRGVEWSSSTYNTLLHGSC 539



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 179/402 (44%), Gaps = 42/402 (10%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
            V  +N+++N + +E  Y  A E    +V      I PN ++++ +I  +C  G ++ A 
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEK---GISPNVISYSTLINVLCNSGQIELAF 301

Query: 213 QLFREMPVRNCEPDIYT------------------------------------YCTLMDG 236
               +M  R C P+IYT                                    Y TL+ G
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C    + +AV +   M+  GC P   T+  LING  K G L  A  + + M   GC PN
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            V Y  ++  LC      +A SL++ M    C P+  T+   I GL   GR     +V  
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481

Query: 357 SMEER-KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
            ME++ +   N   Y+ L+ GL K  + E+A  L +++  +G + ++  Y+ L+ G C  
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK--DMAKNNCVYNEV 473
           G P  A +++ +M+ +G + +  T + ++  + + GK  +A ++       +     + +
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI 601

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
            Y+ +I GLC      +  ++  +M+S G  P +  +S +I+
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 191/419 (45%), Gaps = 42/419 (10%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           TP+TF V+I  L  +G++     L+  M L+G   +E  + ++I      G  ++AV + 
Sbjct: 75  TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            R+    C P+   Y  +++ L+   R      V   M+   F  N + Y+ L+  L K 
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL--FEMINNGCAANAF 438
            K + A KL  +M  KGC P+ V Y+ +I  +C VG   E  E+   FE +         
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV-------VS 247

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            Y++L+ G  +      A E+ ++M +     N + YS LI+ LC  G++  A    TQM
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           L RGC P++   SS++ G    G+  +AL L+N+M+      QP+V  YN L+   C   
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQPNVVAYNTLVQGFCSHG 366

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           NI  ++ + + M + GC P++ T    +    ++     DG       A+ ++ +  TSG
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR--GSLDG-------AVYIWNKMLTSG 417

Query: 619 -------------------GFK----IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                               FK    ++E+M ++  +P   T+   ++ LC   R+  A
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 154/346 (44%), Gaps = 40/346 (11%)

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F T + +  C   + + +S++      G    AL+ +N ++  +   + PN + +N +++
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI--RGFGLQPNVVAYNTLVQ 360

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C  G +  A+ +F  M    C P+I TY +L++G  K   LD AV + ++M   GC P
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             V +  ++  LC++ +   A  L++ M  + C P+  T+N  I GLC  G LD A  + 
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480

Query: 321 DRMVAS-KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            +M    +C PN VTY  +++GL K  R  +   +   +  R    +   Y+TL+ G   
Sbjct: 481 RQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540

Query: 380 EGKAEDAMKLWKQMMEKG---------------CK----------------------PNT 402
            G    A++L  +MM  G               CK                      P+ 
Sbjct: 541 AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDV 600

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           + Y+ +I GLCR    ++   +L  MI+ G   +  T+S L+  F 
Sbjct: 601 ISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 149/302 (49%), Gaps = 10/302 (3%)

Query: 112 EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
           +  VV   + +  F ++G    + +A+ +F  M +E  C   ++++ S++N   + G   
Sbjct: 349 QPNVVAYNTLVQGFCSHGN---IVKAVSVFSHM-EEIGCSPNIRTYGSLINGFAKRGSLD 404

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            A+  +N ++ +      PN + +  +++ +CR      A  L   M   NC P + T+ 
Sbjct: 405 GAVYIWNKMLTS---GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 461

Query: 232 TLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             + GLC   RLD A  +  +M Q   C P  VT+N L++GL K   +  A  L   +F+
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G   +  TYNTL+HG C  G    A+ L+ +M+     P+E+T   II    K G+A  
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581

Query: 351 GARVL--MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            A++L  +S   RK+  +   Y+ +I GL +    ED + L ++M+  G  P+   +S L
Sbjct: 582 AAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVL 641

Query: 409 ID 410
           I+
Sbjct: 642 IN 643



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 11/164 (6%)

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC P V  Y+ ++  L     ++    ++ +M       +P+VFTYN+LL ALCK + + 
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK--RDGFEPNVFTYNVLLKALCKNNKVD 198

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQDGTDFLNELAIRLFK 612
            +  LL  M ++GC PD V+    ++++         +E  E  +      N L   L K
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCK 258

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                G F+++  M++K +SP   ++  ++  LC   +I+ A +
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHT 143
           TF + I+   ++G     E V  +M ++ R      ++  +     KA+ +EEA  L   
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI-VNAKHMNILPNTLTFNLVIKTV 202
           +      + +  ++N++L+     GL   AL+    + V+ K     P+ +T N++I   
Sbjct: 519 IFMR-GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKS----PDEITMNMIILAY 573

Query: 203 CRLGLVDNAIQLFREMPV--RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
           C+ G  + A Q+   +    R   PD+ +Y  ++ GLC+ N  ++ V+LL+ M   G  P
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633

Query: 261 TPVTFNVLIN 270
           +  T++VLIN
Sbjct: 634 SIATWSVLIN 643


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 152/508 (29%), Positives = 259/508 (50%), Gaps = 8/508 (1%)

Query: 85  TFYSLIQHY-ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           TF  L++   A+     ++++VL RM     +    S   + K     +  +EA+ L H 
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 183

Query: 144 MVDEFHCKRT--VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           M D+        V S+ +V+N   +EG   +A   Y+ +++ +   I P+ +T++ +I  
Sbjct: 184 MADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRR---ISPDVVTYSSIIAA 240

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+   +D A+++   M      P+  TY +++ G C   +  EA+  L +M+ DG  P 
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+N L++ LCKNG    A K+ D+M  +G  P+  TY TL+ G   KG L +  +LLD
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            MV +   P+   +  +I    K  +  +   V   M +   + N   Y  +I  L K G
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             +DAM  ++QM+++G  PN +VY++LI  LC   K D+AEE++ EM++ G   N   ++
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           S++    + G+  ++ +++  M +     N + YS LI G C  GK+ EA  + + M S 
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSV 540

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G KPD V Y+++I+G C    +++AL LF EM  +     P++ TYNI+L  L      +
Sbjct: 541 GMKPDCVTYNTLINGYCRVSRMDDALALFKEM--VSSGVSPNIITYNIILQGLFHTRRTA 598

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            + +L   +   G   +L T NI L  L
Sbjct: 599 AAKELYVGITKSGTQLELSTYNIILHGL 626



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 235/473 (49%), Gaps = 6/473 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I  A  K   +++A+ +  TMV          ++NS+L+          A+ F   
Sbjct: 233 TYSSIIAALCKGQAMDKAMEVLTTMVKN-GVMPNCMTYNSILHGYCSSEQPKEAIGFLKK 291

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   +   + P+ +T+N ++  +C+ G    A ++F  M  R  EPDI TYCTL+ G   
Sbjct: 292 M---RSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYAT 348

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +  L E   LLD M  +G  P    FN+LI    K  ++  A  +   M   G  PN VT
Sbjct: 349 KGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVT 408

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y  +I  LC  G++D A+   ++M+     PN + Y ++I+ L    +      +++ M 
Sbjct: 409 YGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEML 468

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R   +N   ++++I    KEG+  ++ KL+  M+  G KPN + YS LIDG C  GK D
Sbjct: 469 DRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMD 528

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA ++L  M + G   +  TY++L+ G+    +   A+ ++K+M  +    N + Y++++
Sbjct: 529 EATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIIL 588

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GL    +   A+ ++  +   G + ++  Y+ ++HGLC     +EAL++F   LCL   
Sbjct: 589 QGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN-LCL-TD 646

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            Q +  T+NI++ AL K      + DL  ++   G  PD+ T ++    L E+
Sbjct: 647 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQ 699



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/496 (26%), Positives = 235/496 (47%), Gaps = 30/496 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  YN +  A    + P   T+ ++I   CR G +D        +  +    +  T+  
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 233 LMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           L+ GLC + R  +A+ ++L  M    C P   +  +L+ GLC       A +L+  M   
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADD 187

Query: 292 ---GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              G  P+ V+Y T+I+G   +G+ DKA S    M+  +  P+ VTY +II  L K G+A
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK-GQA 246

Query: 349 VDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           +D A  VL +M +     N   Y++++ G     + ++A+   K+M   G +P+ V Y++
Sbjct: 247 MDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNS 306

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           L+D LC+ G+  EA +I   M   G   +  TY +L++G+   G   +   +   M +N 
Sbjct: 307 LMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNG 366

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              +   +++LI    +  K+ EA +V+++M   G  P+VV Y ++I  LC +GSV++A+
Sbjct: 367 IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAM 426

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
             F +M  ++    P++  Y  L+++LC       + +L+  M+DRG     +  N    
Sbjct: 427 LYFEQM--IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG-----ICLN---- 475

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                       T F N +     K  R     K+ ++M++  + P   T+  ++   C 
Sbjct: 476 ------------TIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCL 523

Query: 648 PKRIQAAINKCWSNLY 663
             ++  A  K  S+++
Sbjct: 524 AGKMDEA-TKLLSSMF 538



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 112/254 (44%), Gaps = 4/254 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   Y  A  ++EA +L  +M      K    ++N+++N   +      AL  +  
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMF-SVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V++    + PN +T+N++++ +        A +L+  +     + ++ TY  ++ GLCK
Sbjct: 572 MVSS---GVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCK 628

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            N  DEA+ +   + +        TFN++I  L K G    A  L   +   G +P+  T
Sbjct: 629 NNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRT 688

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+ +   L  +G L++   L   M  + C  N     +I+  L++ G        L  ++
Sbjct: 689 YSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMID 748

Query: 360 ERKFHVNEYIYSTL 373
           E+ F +     S L
Sbjct: 749 EKHFSLEASTASLL 762


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 243/503 (48%), Gaps = 26/503 (5%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++K+ N+ L  +++ G    A E ++ +  ++  N+  N  ++  +IK +C+ G VD   
Sbjct: 184 SIKTCNAFLEALVRAGQLDAAREVFDEMRESR--NVALNEYSYTAMIKALCKAGKVDAGF 241

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           ++  E+     +P + TY  LMD LCK  R++EA  L   M+  G  P+ VTF +LINGL
Sbjct: 242 EMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGL 301

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            +    G    ++  M   G  PNEV YN LI   C KG+  +A+ L D MV  K  P  
Sbjct: 302 ARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTA 361

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA-EDAMKLWK 391
           VTY  I   L K G      R+L  M      V+  +++T+++ L +  +  E  + +  
Sbjct: 362 VTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITN 421

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M+ +G +PN  + +A +  LC+ GK  EA  I F+ +N G   N  T ++L+ G  E  
Sbjct: 422 EMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGK 481

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              +A ++ + M       + + Y+++I G C+D K+ EA  +   M  RG KPD+  ++
Sbjct: 482 YMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFN 541

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +++H  CN G +EE   L ++M       QPD+ +Y  +++  CK  +I  + + L  +M
Sbjct: 542 TLLHAYCNLGKMEETFHLLDQMKT--EGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELM 599

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
           DRG  P     N+F+                 N L     +    SG    VE M    +
Sbjct: 600 DRGLKP-----NVFI----------------YNALIGGYGRNGDISGAIDAVETMKSNGI 638

Query: 632 SPQTSTWERVVQELCRPKRIQAA 654
            P   T+  ++  +C    ++ A
Sbjct: 639 QPTNVTYGSLMYWMCHAGLVEEA 661



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 209/456 (45%), Gaps = 18/456 (3%)

Query: 103 EMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVD---EFHCKRTVKSFNS 159
           EMVL +M+         ++  I KA  K   +E A R+   M+      HC      FN+
Sbjct: 351 EMVLKKMKPTA-----VTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL----FNT 401

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           V+  ++Q     R LE    I N      + PN       ++ +C+ G    A+ ++ + 
Sbjct: 402 VVAWLLQR---TRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKT 458

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             +    ++ T   L+ GLC+   + EA  ++  M   G     +T+N++I G CK+ ++
Sbjct: 459 LNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKM 518

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A KL  +M  +G  P+  T+NTL+H  C  G +++   LLD+M      P+ V+YGTI
Sbjct: 519 EEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTI 578

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+G  K          L  + +R    N +IY+ LI G  + G    A+   + M   G 
Sbjct: 579 IDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGI 638

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
           +P  V Y +L+  +C  G  +EA+ I  +   N        Y+ +++G+ + GK  +AV 
Sbjct: 639 QPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVA 698

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
            +++M       N++ Y+ L++   + G   EA  ++ +M+  G  PD + Y ++I    
Sbjct: 699 YFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCS 758

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
              S+++ +    E+         D   YNIL N +
Sbjct: 759 EVNSLDKDIGHTAEL--SSGALTKDDRMYNILSNGI 792



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 83/217 (38%), Gaps = 48/217 (22%)

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------ 533
           G L  A   +  + SRG  P +   ++ +  L  AG ++ A ++F+EM            
Sbjct: 164 GSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYS 223

Query: 534 -------LCLEPKS---------------QPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
                  LC   K                QP V TYN+L++ALCK   +  +  L   M 
Sbjct: 224 YTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRME 283

Query: 572 DRGCDPDLVTCNIFLTALK--EKL--------EAPQDGTD----FLNELAIRLFKRQRTS 617
             G  P +VT  I +  L   E+         E  Q G        NEL     ++   S
Sbjct: 284 QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCS 343

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              ++ + M+ K + P   T+  + + LC+   ++ A
Sbjct: 344 QALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERA 380



 Score = 41.2 bits (95), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 15/113 (13%)

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNE--------- 605
           Q ++  + D    +  RG  P + TCN FL AL    +L+A ++  D + E         
Sbjct: 163 QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEY 222

Query: 606 ----LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               +   L K  +   GF+++  + +  L P   T+  ++  LC+  R++ A
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEA 275


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/401 (31%), Positives = 224/401 (55%), Gaps = 2/401 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P  +TF  +I  + ++G    A++LF +M  R C+PD YTY T+++GLCK      
Sbjct: 39  LGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETAL 98

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  L  +M+  GC    VT++ LI+ LCK   +  A  +   M  K   P   TY +LI 
Sbjct: 99  AAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQ 158

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC      +A +LL+ M +   MPN VT+  +++   K G+ +    VL +M E     
Sbjct: 159 GLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEP 218

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   Y++L+ G     +  +A KL+  M+ KGCKP+   YS LI+G C+  + DEA+++ 
Sbjct: 219 DVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLF 278

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EMI+ G   N  +Y++L+ G  + G+  +A +++K+M  N  + N   Y++L+ G C+ 
Sbjct: 279 NEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQ 338

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L +A  ++  M S   KP++V Y+ +++ +C +G++++A +LF+E+  +    QP+V 
Sbjct: 339 GYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVI--GLQPNVQ 396

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            Y  ++N LCK+  +  +++   +M D GC PD  + N+ +
Sbjct: 397 IYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVII 437



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 233/429 (54%), Gaps = 5/429 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T+ +F +++N + + G + +A+E ++ +V        P+  T+  +I  +C++G    A 
Sbjct: 44  TIVTFTTLINGLGKVGKFAQAVELFDDMV---ARGCQPDDYTYTTIINGLCKIGETALAA 100

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            LF++M    C+ ++ TY TL+  LCK  R++EA+ +   M+     PT  T+  LI GL
Sbjct: 101 GLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGL 160

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C       A+ L++ M     +PN VT+N L+   C +G +  A  +L  M      P+ 
Sbjct: 161 CNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDV 220

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY +++ G       V+  ++   M  +    + + YS LI+G  K  + ++A +L+ +
Sbjct: 221 VTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNE 280

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +G  PN V Y+ LI GLC++G+  EA+++   M  NG   N +TY+ L+ GF + G 
Sbjct: 281 MIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGY 340

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             KA  +++ M       N V Y++L++ +C+ G L++AR +++++   G +P+V  Y++
Sbjct: 341 LGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTT 400

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I+GLC  G ++EAL+ F  M   +    PD F+YN+++    +  + S ++ L+  M D
Sbjct: 401 IINGLCKEGLLDEALEAFRNME--DDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRD 458

Query: 573 RGCDPDLVT 581
           RG   D  T
Sbjct: 459 RGFITDAGT 467



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/372 (32%), Positives = 195/372 (52%), Gaps = 2/372 (0%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M +    P+  T   L++  C+  R+D    +L +    G  PT VTF  LINGL K G+
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
             +A +L D+M  +GC P++ TY T+I+GLC  G    A  L  +M  + C  N VTY T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I+ L K  R  +   +   M+ +      + Y++LI GL    + ++A  L  +M    
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             PN V ++ L+D  C+ GK   AE +L  M   G   +  TY+SLM G+    +  +A 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           +++  M    C  +   YS+LI+G C+  ++ EA+ ++ +M+ +G  P+ V+Y+++IHGL
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C  G + EA  LF  M      + P+++TY ILL+  CKQ  +  +  L  +M      P
Sbjct: 301 CQLGRLREAQDLFKNM--HTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKP 358

Query: 578 DLVTCNIFLTAL 589
           +LV  NI + A+
Sbjct: 359 NLVMYNILVNAM 370



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 201/414 (48%), Gaps = 4/414 (0%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +    GK     +A+ LF  MV    C+    ++ +++N + + G    A   +  
Sbjct: 47  TFTTLINGLGKVGKFAQAVELFDDMVAR-GCQPDDYTYTTIINGLCKIGETALAAGLFKK 105

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  A       N +T++ +I ++C+   V+ A+ +F  M  ++  P I+TY +L+ GLC 
Sbjct: 106 MEEA---GCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCN 162

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            +R  EA  LL+EM      P  VTFNVL++  CK G++  A  ++  M   G  P+ VT
Sbjct: 163 FSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN+L++G  +   + +A  L D M+   C P+  +Y  +ING  K  R  +  ++   M 
Sbjct: 223 YNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    N   Y+TLI GL + G+  +A  L+K M   G  PN   Y+ L+DG C+ G   
Sbjct: 283 HQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLG 342

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A  +   M +     N   Y+ L+    +SG    A E++ ++       N   Y+ +I
Sbjct: 343 KAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTII 402

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +GLC++G L EA   +  M   GC PD  +Y+ +I G         A+ L  EM
Sbjct: 403 NGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEM 456



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 187/408 (45%), Gaps = 42/408 (10%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFK 126
           E+F+     G  Q  D T+ ++I      G+  +L   L++   E    L   ++  +  
Sbjct: 66  ELFDDMVARGC-QPDDYTYTTIINGLCKIGE-TALAAGLFKKMEEAGCQLNVVTYSTLIH 123

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           +  K   V EA+ +F  M  +     T+ ++ S++  +     +  A    N + +   +
Sbjct: 124 SLCKYRRVNEALDIFSYMKAK-DISPTIFTYTSLIQGLCNFSRWKEASALLNEMTS---L 179

Query: 187 NILPNTLTFNLVIKTVCRLGLV-----------------------------------DNA 211
           NI+PN +TFN+++ T C+ G V                                     A
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEA 239

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
            +LF  M  + C+PD+++Y  L++G CK  R+DEA  L +EM   G  P  V++N LI+G
Sbjct: 240 RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LC+ G L  A  L  NM   G LPN  TY  L+ G C +G L KA  L   M ++   PN
Sbjct: 300 LCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 359

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            V Y  ++N + K G   D   +   +       N  IY+T+I+GL KEG  ++A++ ++
Sbjct: 360 LVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFR 419

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            M + GC P+   Y+ +I G  +      A  ++ EM + G   +A T
Sbjct: 420 NMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 133/258 (51%), Gaps = 23/258 (8%)

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G +P  V ++ LI+GL +VGK  +A E+  +M+  GC  + +TY++++ G  + G+   A
Sbjct: 40  GLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALA 99

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
             ++K M +  C  N V YS LIH LC+  ++ EA  +++ M ++   P +  Y+S+I G
Sbjct: 100 AGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQG 159

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LCN    +EA  L NEM  L     P+V T+N+L++  CK+  +  +  +L +M + G +
Sbjct: 160 LCNFSRWKEASALLNEMTSL--NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVE 217

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           PD+VT N  +       E  +         A +LF            +VM+ K   P   
Sbjct: 218 PDVVTYNSLMYGYSMWTEVVE---------ARKLF------------DVMITKGCKPDVF 256

Query: 637 TWERVVQELCRPKRIQAA 654
           ++  ++   C+ KRI  A
Sbjct: 257 SYSILINGYCKAKRIDEA 274


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 256/512 (50%), Gaps = 15/512 (2%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI--FIFK 126
           + +S  ++ +Y     T   ++  Y  +  F  ++ V+  M  EKR V         +  
Sbjct: 150 VLSSNSEVNTY-----TLNIMVHSYCKTLQFGEVDTVISEM--EKRCVFPDVVTHNVMVD 202

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           A  +A  VE A+ L  +MV +   K  + ++NSVL  +++ G + +A E +  +      
Sbjct: 203 ARFRAGDVEAAMALIDSMVSK-GIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM---DAC 258

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            + P+  +FN++I   CR G ++ A++ ++EM  R   PD+ ++  L+    +   +D A
Sbjct: 259 GVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHA 318

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
              L EM+  G  P  V + ++I G C+ G +  A ++ D M   GCLP+ VTYNTL++G
Sbjct: 319 AEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNG 378

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC +  L  A  LL+ M      P+  T+ T+I+G  + G      +   ++ +++   +
Sbjct: 379 LCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPD 438

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+TLI G+ ++G    A +LW  M  +   PN V YS LID  C  G+ D A   L 
Sbjct: 439 IVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLD 498

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM+N G   N  TY+S++KG+  SG   K  +    M  +  + + + Y+ LIHG  ++G
Sbjct: 499 EMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEG 558

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ EA  +   M +   +PD V Y+ +I G    G+++EA  ++ +M       +PD +T
Sbjct: 559 KMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGAR--GIEPDRYT 616

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           Y  ++N      N   S  L + M+ +G  PD
Sbjct: 617 YMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 218/429 (50%), Gaps = 7/429 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V + N +++   + G    A+   + +V+     I P  +T+N V+K + R G  D A +
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSK---GIKPGLVTYNSVLKGLLRNGRWDKARE 250

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +FR M      PD+ ++  L+ G C+   L+EA+    EM+     P  V+F+ LI    
Sbjct: 251 VFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFT 310

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           + GE+  AA+ +  M   G +P+ V Y  +I G C  G + +A+ + D MVA  C+P+ V
Sbjct: 311 RRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVV 370

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T++NGL K  R  D   +L  M+ER    +   ++TLI G  ++G  E A++ +  +
Sbjct: 371 TYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTI 430

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            ++  +P+ V Y+ LIDG+CR G   +A E+  +M +     N  TYS L+    E G+ 
Sbjct: 431 SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQV 490

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A     +M     V N + Y+ +I G C  G + + +    +M      PD++ Y+++
Sbjct: 491 DNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTL 550

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           IHG    G + EA   FN +  +E ++ QPD  TYN++++      N+  +  +   M  
Sbjct: 551 IHGYVKEGKMHEA---FNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGA 607

Query: 573 RGCDPDLVT 581
           RG +PD  T
Sbjct: 608 RGIEPDRYT 616



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/464 (28%), Positives = 222/464 (47%), Gaps = 15/464 (3%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN- 187
           G  HL  +A RL  +   E +           LN+++    Y + L+F         M  
Sbjct: 138 GWPHLTADAYRLVLSSNSEVN--------TYTLNIMVHS--YCKTLQFGEVDTVISEMEK 187

Query: 188 --ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             + P+ +T N+++    R G V+ A+ L   M  +  +P + TY +++ GL +  R D+
Sbjct: 188 RCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDK 247

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  +   M   G  P   +FN+LI G C+ GEL  A +    M  +   P+ V+++ LI 
Sbjct: 248 AREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIG 307

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
               +G +D A   L  M     MP+ V Y  +I G  + G  ++  RV   M       
Sbjct: 308 LFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLP 367

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   Y+TL++GL KE +  DA +L  +M E+G  P+   ++ LI G CR G  ++A +  
Sbjct: 368 DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFF 427

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             + +     +  TY++L+ G    G   KA E+W DM       N V YS+LI   CE 
Sbjct: 428 DTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEK 487

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G++  A     +M+++G  P+++ Y+S+I G C +G+V +  +   +M     K  PD+ 
Sbjct: 488 GQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMR--HDKVMPDLI 545

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           TYN L++   K+  +  + +LL  M +    PD VT N+ ++  
Sbjct: 546 TYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGF 589



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 116/245 (47%), Gaps = 33/245 (13%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE---- 175
           +F  +   Y +   +E+A++ F T+ D+   +  + ++N++++ + ++G   +A E    
Sbjct: 406 TFTTLIHGYCRDGNIEKALQFFDTISDQ-RLRPDIVTYNTLIDGMCRQGDLGKANELWDD 464

Query: 176 ------FYNHIVNAKHMN----------------------ILPNTLTFNLVIKTVCRLGL 207
                 F NH+  +  ++                      I+PN +T+N +IK  CR G 
Sbjct: 465 MHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGN 524

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V    Q   +M      PD+ TY TL+ G  KE ++ EA  LL  M+ +   P  VT+N+
Sbjct: 525 VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNM 584

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           +I+G   +G +  A  +   M  +G  P+  TY ++I+G  + GN  K+  L D M+   
Sbjct: 585 IISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKG 644

Query: 328 CMPNE 332
             P++
Sbjct: 645 LAPDD 649



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/304 (20%), Positives = 131/304 (43%), Gaps = 24/304 (7%)

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           ++  LI    +  K  +A + ++ +++          +AL+  L R G P    +    +
Sbjct: 91  VFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADAYRLV 150

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIHGLCEDGK 487
           +++    N +T + ++  + ++ +  +   +  +M K  CV+ +V  ++V++      G 
Sbjct: 151 LSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKR-CVFPDVVTHNVMVDARFRAGD 209

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A  +   M+S+G KP +V Y+S++ GL   G  ++A ++F  M        PDV ++
Sbjct: 210 VEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDAC--GVAPDVRSF 267

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           N+L+   C+   +  ++     M  R   PD+V+ +  +     + E      ++L E+ 
Sbjct: 268 NMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDH-AAEYLREM- 325

Query: 608 IRLFKRQRTS-------GGFKIVEVMLQKFLS----------PQTSTWERVVQELCRPKR 650
            R F             GGF    +ML+              P   T+  ++  LC+ +R
Sbjct: 326 -REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR 384

Query: 651 IQAA 654
           +  A
Sbjct: 385 LSDA 388



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 97/229 (42%), Gaps = 11/229 (4%)

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           + +   ++     P   V+  LI    +  KP EA E    ++++     A   ++L+  
Sbjct: 74  LDIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAA 133

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
              +G  H   + ++ +  +N   N    ++++H  C+  +  E   V ++M  R   PD
Sbjct: 134 LSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPD 193

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           VV ++ M+     AG VE A+ L + M+    K  P + TYN +L  L +      + ++
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSKGIK--PGLVTYNSVLKGLLRNGRWDKAREV 251

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
             +M   G  PD+ + N+ +       E          E A+R +K  R
Sbjct: 252 FRAMDACGVAPDVRSFNMLIGGFCRAGEL---------EEALRFYKEMR 291


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/551 (26%), Positives = 268/551 (48%), Gaps = 70/551 (12%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R+  + N V++++ ++  +     ++  +   K+ NI     TF+++I    + G+ + A
Sbjct: 94  RSWVTHNLVIDMLAKDDGFD---TYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKA 150

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           ++ F +M    C+PD++TY +++  + ++     A+ + ++M      P   TF +L+NG
Sbjct: 151 VESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNG 210

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCKNG+   A K+ D M  KG  PN + Y  ++ GLC     D    LL+ M  S C P+
Sbjct: 211 LCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPD 270

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            +T   +++G  KLG+  +   +L   E+  + +    YS+LI GLF+  + ++  +  +
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCR 330

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M + G +P+ V+Y+ LI G C VG  D A  +L +M   G + + + Y++L+KGF + G
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG 390

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              KA  +  +++KN+C      Y++LI G+C +G L EAR ++ QM + GC P ++ ++
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450

Query: 512 SMIHGLCNAGSVEEALKLFNEM-------------------------------LC----- 535
           ++I GLC AG +EEA  LF +M                               LC     
Sbjct: 451 ALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLI 510

Query: 536 ----------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
                      +    PD+ TYN+L+N  CK  NI+ +  L   +  +G  PD VT    
Sbjct: 511 LKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTL 570

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
           +           DG            +  R    F++++ M++   +P ++ ++ ++   
Sbjct: 571 I-----------DG----------FHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWS 609

Query: 646 CRPKRIQAAIN 656
           CR  ++  A +
Sbjct: 610 CRKGKLSVAFS 620



 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 167/592 (28%), Positives = 283/592 (47%), Gaps = 47/592 (7%)

Query: 27  LTTIPSERSHR------FFSVRSAVSSNKQ---MET-EPQGNAKSE-QPF-SDEIFNST- 73
           L  IP +   R      F + + A  SN+    MET  P  +A  +  PF S EI N   
Sbjct: 12  LHFIPKQSRFRCLHANLFTTAQGAAISNEVLTVMETVNPMEDALEKLAPFLSSEIVNDVM 71

Query: 74  -----PKLG----SYQLGDSTFYSLIQH------YANSGDFKSLEMVLYRMRREKRVVLE 118
                P+LG     +     +F S + H       A    F +   +L  ++     +  
Sbjct: 72  REQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPP 131

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
            +F  +  AY K+ + E+A+  F  M D F CK  V ++NS+L+V++Q+ ++  AL  YN
Sbjct: 132 PTFSVLIAAYAKSGMAEKAVESFGKMKD-FGCKPDVFTYNSILHVMVQKEVFLLALAVYN 190

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++    +N  PN  TF +++  +C+ G  D+A+++F EM  +   P+   Y  ++ GLC
Sbjct: 191 QMLK---LNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLC 247

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           +  R D+   LL+ M+V GC P  +T N L++G CK G++  A  L+     +G +    
Sbjct: 248 QAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIK 307

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y++LI GL      D+      +M  +   P+ V Y  +I G  ++G       +L  M
Sbjct: 308 GYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDM 367

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +R    + Y Y+ LI G    G  + A  L  ++ +  C P +  Y+ LI G+CR G  
Sbjct: 368 TQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLL 427

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM--AKNNCVY------ 470
           DEA +I  +M N GC+ +  T+++L+ G  ++G+  +A  ++  M   KN  ++      
Sbjct: 428 DEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQG 487

Query: 471 -----NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                +      ++  LCE G + +A  +  Q+   G  PD++ Y+ +I+G C A ++  
Sbjct: 488 ADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNING 547

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           A KLF E L L+  S PD  TY  L++   +      +  +L+ M+  GC P
Sbjct: 548 AFKLFRE-LQLKGHS-PDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTP 597



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 141/561 (25%), Positives = 243/561 (43%), Gaps = 76/561 (13%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   + K   ++EA  L      E +    +K ++S+++ + +   Y    E+   +  A
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYV-LGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKA 335

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               I P+ + + ++I+  C +G+VD A+ +  +M  R   PD Y Y  L+ G C    L
Sbjct: 336 ---GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLL 392

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A  L  E+  + CFPT  T+ +LI G+C+NG L  A ++ + M   GC P+ +T+N L
Sbjct: 393 DKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNAL 452

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I GLC  G L++A  L  +M   K   N   +  +  G     R +D A +         
Sbjct: 453 IDGLCKAGELEEARHLFYKMEIGK---NPSLFLRLSQGA---DRVMDTASL--------- 497

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
                   T++  L + G    A KL  Q+ + G  P+ + Y+ LI+G C+    + A +
Sbjct: 498 -------QTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFK 550

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  E+   G + ++ TY +L+ GF    +   A  +   M KN C  +   Y  L+   C
Sbjct: 551 LFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSC 610

Query: 484 EDGKLREARMVWTQML-SRGCKPD---------------------------------VVA 509
             GKL  A  +W + L S   + D                                 +  
Sbjct: 611 RKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAP 670

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+  + GLC A   EEALK+F  ++  E +   +  +  +L+N LCK  N+  ++D+   
Sbjct: 671 YTIWLIGLCQARRSEEALKIF--LVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLY 728

Query: 570 MMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVML 627
            +++G       CN  L +  L++K+   +   D LN +          S G+ + E + 
Sbjct: 729 TLEKGFMLMPRICNQLLRSLILQDKM---KHALDLLNRM---------NSAGYDLDEYLH 776

Query: 628 QKFLSPQTSTWERVVQELCRP 648
            +  S   S W+    E   P
Sbjct: 777 HRIKSYLLSVWKAQEMENVAP 797


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 239/431 (55%), Gaps = 9/431 (2%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K ++ +FN+++N +  EG    A+E  ++I++  +    P   T  +++  +C++G    
Sbjct: 171 KPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ---PTVYTHTMIVNGLCKIGKTSA 227

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           AI   ++M   +CEP++ +Y  ++D LCK   ++EAV L   M+  G  PT VT+N LI 
Sbjct: 228 AIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIY 287

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           G+C +G+  +A+ L   M      P+ VT++ L+  LC +G + +A+S+  +M+     P
Sbjct: 288 GMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEP 347

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + VTY ++I+G+ K     + + +L  M  R    +   +S  +    K+G   +A  + 
Sbjct: 348 DIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSII 407

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M+E+G +PN V Y++L+DG C   + DEA ++   M+N GCA +  +Y+ L+KG+ +S
Sbjct: 408 NLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKS 467

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            +  +A +++ +M+      N + ++ LI GLC+ G+   A+ ++ +M S GC PD++ Y
Sbjct: 468 ERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITY 527

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLN 568
           S+++ G C  G ++EAL LF  +     KSQ  P+     ILL  +CK   +  + +L +
Sbjct: 528 STLLSGFCKHGHLDEALALFEAL----KKSQLKPNHVICKILLGGMCKAGKLEDAKELFS 583

Query: 569 SMMDRGCDPDL 579
           S+      PD+
Sbjct: 584 SLSIEELQPDV 594



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/510 (26%), Positives = 248/510 (48%), Gaps = 44/510 (8%)

Query: 135 EEAIRLFHTMV--DEFHCKRTVKSFNSVLNVIIQEGLY------HRALEFYNHIVNAKHM 186
           ++A+  F+ MV  + F C   +  FN +L  +++   Y      +R +EF+    +   +
Sbjct: 86  DDALAYFNQMVHMNPFPC---ITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 187 NIL--------------------------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
            IL                          P+ +TFN +I  +C  G +  A++    +  
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           R  +P +YT+  +++GLCK  +   A++ + +M    C P  V+++++I+ LCKN  +  
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNE 262

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A  L  +M   G  P  VTYN+LI+G+C  G   +A  L   M+     P+ VT+  +++
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
            L K G  ++   V   M +     +   YS+LI G+ K    +++  L  +M+ +  +P
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRP 382

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + V +S  +D  C+ G   EA+ I+  MI  G   N  TY+SLM G+    +  +A +++
Sbjct: 383 DVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVF 442

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
             M    C  + + Y++LI G C+  ++ EA+ ++ +M  +G  P+ + ++++I GLC A
Sbjct: 443 DIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQA 502

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           G    A +LF +M        PD+ TY+ LL+  CK  ++  ++ L  ++      P+ V
Sbjct: 503 GRPYAAKELFKKMG--SHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHV 560

Query: 581 TCNIFLTAL--KEKLEAPQDGTDFLNELAI 608
            C I L  +    KLE   D  +  + L+I
Sbjct: 561 ICKILLGGMCKAGKLE---DAKELFSSLSI 587



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 214/428 (50%), Gaps = 16/428 (3%)

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +  D+A+   ++M     FP    FN L+  L +         +   M   G   +  T 
Sbjct: 83  SNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTL 142

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
             LI+ LC    +    S+L ++      P+ +T+ T+INGL   GR V+    L  +  
Sbjct: 143 TILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMS 202

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R +    Y ++ +++GL K GK   A+   K+M+E  C+P  V YS +ID LC+    +E
Sbjct: 203 RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNE 262

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A ++ + M + G +    TY+SL+ G   SG+  +A  ++K+M + N   + V +S+L+ 
Sbjct: 263 AVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVD 322

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC++G + EA  V+ +M+    +PD+V YSS+IHG+C +   +E+  L NEM  L    
Sbjct: 323 ALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEM--LSRNI 380

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQD 598
           +PDV T++I ++  CK+  +S +  ++N M++RG  P++VT N  +    L  +++  + 
Sbjct: 381 RPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARK 440

Query: 599 GTDFL------------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
             D +            N L     K +R     ++ + M  K L+P + T   ++  LC
Sbjct: 441 VFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLC 500

Query: 647 RPKRIQAA 654
           +  R  AA
Sbjct: 501 QAGRPYAA 508



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 194/388 (50%), Gaps = 39/388 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  I  +  K  LV EA+ LF+ M        TV ++NS++  +   G + +A   +  
Sbjct: 246 SYSIIIDSLCKNRLVNEAVDLFYHM-RSIGISPTVVTYNSLIYGMCNSGQWKQASILFKE 304

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++     N+ P+ +TF++++  +C+ G+V  A+ +F +M     EPDI TY +L+ G+CK
Sbjct: 305 MLE---WNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCK 361

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            +   E+  LL+EM      P  VTF++ ++  CK G +  A  +++ M  +G  PN VT
Sbjct: 362 SSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVT 421

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN+L+ G CL   +D+A  + D MV   C P+ ++Y  +I G  K  R  +  ++   M 
Sbjct: 422 YNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMS 481

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    N   ++TLISGL + G+   A +L+K+M   GC P+ + YS L+ G C+ G  D
Sbjct: 482 HKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLD 541

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           E                                   A+ +++ + K+    N V   +L+
Sbjct: 542 E-----------------------------------ALALFEALKKSQLKPNHVICKILL 566

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDV 507
            G+C+ GKL +A+ +++ +     +PDV
Sbjct: 567 GGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/163 (19%), Positives = 69/163 (42%), Gaps = 23/163 (14%)

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M   G    V   + +I+ LC+   V     +  ++  L  K  P + T+N L+N 
Sbjct: 126 IYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFK--PSIITFNTLING 183

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
           LC +  I  +++ L+ +M RG  P + T  + +  L                      K 
Sbjct: 184 LCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGL---------------------CKI 222

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +TS     ++ M++    P+  ++  ++  LC+ + +  A++
Sbjct: 223 GKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/452 (30%), Positives = 236/452 (52%), Gaps = 5/452 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA    E++     +V++ H K  V     +++ +       +A++  + + N  H    
Sbjct: 69  KAGNFNESLYFLRHLVNKGH-KPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH---- 123

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ + +N +I   CR   +D+A Q+   M  +   PDI TY  L+  LC    LD A+  
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            +++  + C PT VT+ +LI      G +  A KL+D M      P+  TYN++I G+C 
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G +D+A  ++  + +    P+ +TY  ++ GL+  G+   G  ++  M  R    N   
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS LIS + ++GK E+ + L K M +KG KP+   Y  LI  LC+ G+ D A E+L  MI
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           ++GC  +   Y++++    +  +  +A+ I++ + +  C  N   Y+ +   L   G   
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKV 423

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  +  +ML +G  PD + Y+S+I  LC  G V+EA++L  +M     + +P V +YNI
Sbjct: 424 RALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNI 483

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +L  LCK S +S +I++L +M+D+GC P+  T
Sbjct: 484 VLLGLCKVSRVSDAIEVLAAMVDKGCRPNETT 515



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 226/457 (49%), Gaps = 19/457 (4%)

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ G  + ++   R +  +  +PD+     L+ GL     +D+A+ ++  ++  G  P  
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           + +N +I G C+   +  A +++D M  KG  P+ VTYN LI  LC +G LD A+   ++
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           ++   C P  VTY  +I   +  G   +  ++L  M E     + + Y+++I G+ +EG 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A ++   +  KG  P+ + Y+ L+ GL   GK +   E++ +M+  GC AN  TYS 
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+      GK  + V + KDM K     +  CY  LI  LC++G++  A  V   M+S G
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDG 366

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C PD+V Y++++  LC     +EAL +F ++   E    P+  +YN + +AL    +   
Sbjct: 367 CVPDIVNYNTILACLCKQKRADEALSIFEKL--GEVGCSPNASSYNSMFSALWSTGHKVR 424

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL------KEKLEAPQD----------GTDFLNEL 606
           ++ ++  M+D+G DPD +T N  ++ L       E +E   D               N +
Sbjct: 425 ALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIV 484

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
            + L K  R S   +++  M+ K   P  +T+  +++
Sbjct: 485 LLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIE 521



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 250/526 (47%), Gaps = 61/526 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T  S+ +   ++ DFK   ++    R  K     +S  F+     K H  +  + L   +
Sbjct: 41  TLSSVSKPQTHTLDFKDTHLLKSLSRSCKAGNFNESLYFLRHLVNKGH--KPDVVLCTKL 98

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA-----------------KHMN 187
           +      +T+     V++++   G  H  L  YN I+                   K+  
Sbjct: 99  IHGLFTSKTIDKAIQVMHILENHG--HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKG 156

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             P+ +T+N++I ++C  G++D+A++   ++   NC+P + TY  L++    +  +DEA+
Sbjct: 157 FSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAM 216

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LLDEM      P   T+N +I G+C+ G + RA +++ ++  KG  P+ +TYN L+ GL
Sbjct: 217 KLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGL 276

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
             +G  +    L+  MVA  C  N VTY  +I+ + + G+  +G  +L  M+++    + 
Sbjct: 277 LNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDG 336

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           Y Y  LI+ L KEG+ + A+++   M+  GC P+ V Y+ ++  LC+  + DEA  I  +
Sbjct: 337 YCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEK 396

Query: 428 MINNGCAANAFTYSSLMKGFFESG--------------KG-------------------- 453
           +   GC+ NA +Y+S+    + +G              KG                    
Sbjct: 397 LGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGM 456

Query: 454 -HKAVEIWKDMA--KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
             +A+E+  DM    + C  + V Y++++ GLC+  ++ +A  V   M+ +GC+P+   Y
Sbjct: 457 VDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTY 516

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           + +I G+   G + +A  L   ++ ++  S+    ++  L    CK
Sbjct: 517 TFLIEGIGFGGCLNDARDLATTLVNMDAISE---HSFERLYKTFCK 559



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 191/397 (48%), Gaps = 17/397 (4%)

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G    +   + ++  KG  P+ V    LIHGL     +DKA+ ++  ++ +   P+ 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVM-HILENHGHPDL 126

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           + Y  II G  +  R     +VL  M+ + F  +   Y+ LI  L   G  + A++   Q
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           ++++ CKP  V Y+ LI+     G  DEA ++L EM+      + FTY+S+++G    G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A +I   ++      + + Y++L+ GL   GK      + + M++RGC+ +VV YS 
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I  +C  G VEE + L  +M   +   +PD + Y+ L+ ALCK+  +  +I++L+ M+ 
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMK--KKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMIS 364

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDF--------------LNELAIRLFKRQRTSG 618
            GC PD+V  N  L  L ++  A +  + F               N +   L+       
Sbjct: 365 DGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVR 424

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              ++  ML K + P   T+  ++  LCR   +  AI
Sbjct: 425 ALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAI 461



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 162/349 (46%), Gaps = 24/349 (6%)

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  GN ++++  L  +V     P+ V    +I+GL    + +D A  +M + E   H + 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFT-SKTIDKAIQVMHILENHGHPDL 126

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ +I+G  +  + + A ++  +M  KG  P+ V Y+ LI  LC  G  D A E   +
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           ++   C     TY+ L++     G   +A+++  +M + N   +   Y+ +I G+C +G 
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A  + + + S+G  PDV+ Y+ ++ GL N G  E   +L ++M+      + +V TY
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVA--RGCEANVVTY 304

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           ++L++++C+   +   + LL  M  +G  PD    +  + AL                  
Sbjct: 305 SVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAAL------------------ 346

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
               K  R     ++++VM+     P    +  ++  LC+ KR   A++
Sbjct: 347 ---CKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALS 392


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 245/471 (52%), Gaps = 18/471 (3%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K  LVEEA+ ++H    +     T+++ N +L V+++ G +      Y  +++     + 
Sbjct: 127 KMELVEEALSMYH----KVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISN---GLS 179

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +TF  +I   CR G +  A ++F EM V+   P +  Y  L+ GLC +N+++EA  +
Sbjct: 180 PSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESM 239

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
              M+  G +P   T+N L++G CK     +A +L  +M  +G +P+ VT+  LI GLC 
Sbjct: 240 HRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCK 299

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +  A +L   M+     PN   Y ++I+   K+G   +   + + +E  +   + + 
Sbjct: 300 FGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFT 359

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS LI GL    + E+A  ++++M ++G   N+V Y++LIDG C+ GK D+A EI  +M 
Sbjct: 360 YSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMT 419

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            NG   N  T+S+L+ G+ +      A+ I+ +M   +   + V Y+ +I G C+ G ++
Sbjct: 420 ENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMK 479

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE-PK-------SQ 541
           EA  +++ ML  G  P+    S ++ GLC  G + +AL+LF E +  + P+       S+
Sbjct: 480 EALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSK 539

Query: 542 PDV---FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           P +     Y  L++ LC+    S ++ L + M   G  PD V   + L  L
Sbjct: 540 PSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGL 590



 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 154/477 (32%), Positives = 240/477 (50%), Gaps = 22/477 (4%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K T   +  ++ V+ +  L   AL  Y H V A       N L + LV     + G  + 
Sbjct: 112 KFTPNVYGELIIVLCKMELVEEALSMY-HKVGAALTIQACNVLLYVLV-----KTGRFEL 165

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
             +++ EM      P + T+ TL+DG C++  L  A  + DEM+V G  PT + + +LI 
Sbjct: 166 LWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIR 225

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLC + ++  A  +   M   G  PN  TYNTL+ G C   N  +A+ L   M+    +P
Sbjct: 226 GLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVP 285

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + VT+G +I+GL K G       + ++M +     N  +Y++LI    K G   +AM L+
Sbjct: 286 DVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALF 345

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            ++      P+   YS LI GLC V + +EA  I  +M   G  AN+ TY+SL+ G  + 
Sbjct: 346 LELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKE 405

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           GK  KA+EI   M +N    N + +S LI G C+   L+ A  ++++M+ +   PDVV Y
Sbjct: 406 GKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTY 465

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           ++MI G C  GS++EALKL+++M  L+    P+ +T + LL+ LCK   IS +++L    
Sbjct: 466 TAMIDGHCKYGSMKEALKLYSDM--LDNGITPNCYTISCLLDGLCKDGKISDALELFTEK 523

Query: 571 M---------DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           +         D G     +T ++  TAL   L   QDG       A++LF   R  G
Sbjct: 524 IEFQTPRCNVDAGGSKPSLTNHVAYTALIHGL--CQDGQ---FSKAVKLFSDMRRYG 575



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 188/382 (49%), Gaps = 19/382 (4%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y K    ++A+RL+  M+ E      V +F  +++ + + G    A    N  VN 
Sbjct: 258 LMDGYCKLANAKQALRLYQDMLGEGLVPDVV-TFGILIDGLCKFGEMKAA---RNLFVNM 313

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
              ++ PN   +N +I   C++G V  A+ LF E+      PD++TY  L+ GLC  +R 
Sbjct: 314 IKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRT 373

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA  + ++M  +G     VT+N LI+G CK G++ +A ++   M   G  PN +T++TL
Sbjct: 374 EEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTL 433

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C   NL  A+ +   MV     P+ VTY  +I+G  K G   +  ++   M +   
Sbjct: 434 IDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGI 493

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMME----------KGCKP---NTVVYSALID 410
             N Y  S L+ GL K+GK  DA++L+ + +E           G KP   N V Y+ALI 
Sbjct: 494 TPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIH 553

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC+ G+  +A ++  +M   G   +   Y  +++G F+    +  + +  DM K   + 
Sbjct: 554 GLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV--KYILMMLHADMLKFGVIP 611

Query: 471 NEVCYSVLIHGLCEDGKLREAR 492
           N   + +L     E G L+ A+
Sbjct: 612 NSAVHVILCECYQESGFLKSAQ 633



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 134/289 (46%), Gaps = 24/289 (8%)

Query: 70  FNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG 129
           F+ TP +  Y        SLI  Y   GD      +   + R +      ++  + +   
Sbjct: 316 FSVTPNIAVYN-------SLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLC 368

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
                EEA  +F  M  E     +V ++NS+++   +EG   +ALE  + +       + 
Sbjct: 369 SVSRTEEAGNIFEKMTKEGILANSV-TYNSLIDGCCKEGKMDKALEICSQMTEN---GVE 424

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +TF+ +I   C++  +  A+ ++ EM +++  PD+ TY  ++DG CK   + EA+ L
Sbjct: 425 PNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKL 484

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL-------------VDNMFLKGCLPN 296
             +M  +G  P   T + L++GLCK+G++  A +L             VD    K  L N
Sbjct: 485 YSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTN 544

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
            V Y  LIHGLC  G   KAV L   M      P+EV Y  ++ GL ++
Sbjct: 545 HVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV 593


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 152/527 (28%), Positives = 248/527 (47%), Gaps = 42/527 (7%)

Query: 100 KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF--HCKRTVKSF 157
           ++++++L RM     +    S+  + K        EEA+ L H M D+    C   V S+
Sbjct: 143 EAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSY 202

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           + V+N    EG   +    YN  +      I P+ +T+  VI  +C+  L D A  +F++
Sbjct: 203 SIVINGFFTEGQVDKP---YNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQ 259

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M     +P+ YTY  L+ G     +  E V +L+EM   G  P   T+  L+N LCKNG 
Sbjct: 260 MIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGR 319

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
              A    D+M  KG  P   TY  LIHG   KG L +  S LD MV +   P+   +  
Sbjct: 320 CREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNI 379

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
             +   K G       +   M +     N   Y  LI  L K G+ +DA   + QM+ +G
Sbjct: 380 FFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEG 439

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA-------------------- 437
             PN VV+++L+ GLC V K + AEE+++EM++ G   NA                    
Sbjct: 440 VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGR 499

Query: 438 ---------------FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
                          F+Y+ L+ G+  +G+  +A +++  M        EV Y+ L+HG 
Sbjct: 500 RLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGY 559

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C   ++ +A  ++ +ML +G  P VV Y++++HGL       EA +L+  M  +   ++ 
Sbjct: 560 CSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNM--INSGTKC 617

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           D++TYNI+LN LCK + +  +  +  S+  +G   +++T  I + AL
Sbjct: 618 DIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGAL 664



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 217/456 (47%), Gaps = 2/456 (0%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ +    + E  C     S+  +L  +  E     ALE  + + +       PN +
Sbjct: 141 VGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVV 200

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++++VI      G VD    LF EM  R   PD+ TY T++DGLCK    D A  +  +M
Sbjct: 201 SYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQM 260

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P   T+N LI+G    G+     ++++ M  +G  P+  TY +L++ LC  G  
Sbjct: 261 IDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRC 320

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A    D M+     P   TYG +I+G    G   +    L  M E     + +I++  
Sbjct: 321 REARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIF 380

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
            S   K G  + AM ++ +M + G  PN V Y ALID LC++G+ D+AE    +MIN G 
Sbjct: 381 FSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGV 440

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N   ++SL+ G     K  +A E+  +M       N V ++ LI  LC  G++ E R 
Sbjct: 441 TPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRR 500

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   M   G +PD  +Y+ +I G C  G  +EA K+F+ M+ +     P   TYN LL+ 
Sbjct: 501 LIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSI--GLSPTEVTYNTLLHG 558

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            C  S I  +  L   M+ +G  P +VT N  L  L
Sbjct: 559 YCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 152/596 (25%), Positives = 265/596 (44%), Gaps = 63/596 (10%)

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKR--TVKSFNSVLNVIIQ---EGLYH 171
           LE   I   +A  ++  +++A++LF  ++   H  R  +V++FN +L  + +        
Sbjct: 13  LELERIIAERARSRSLGLDDALKLFDELL---HHARPASVRAFNHLLTAVSRARCSSASE 69

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF---------------- 215
            A+  +N +V      + PN  T++++I   CR+G +++    F                
Sbjct: 70  LAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAIN 129

Query: 216 --------------------REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
                               + MP   C PD  +Y  L+ GLC E R +EA+ LL  M  
Sbjct: 130 QLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMAD 189

Query: 256 DG---CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           D    C P  V+++++ING    G++ +   L   M  +G  P+ VTY T+I GLC    
Sbjct: 190 DHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQL 249

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
            D+A  +  +M+ +   PN  TY  +I+G + +G+  +  ++L  M  R    + Y Y +
Sbjct: 250 FDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGS 309

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L++ L K G+  +A   +  M+ KG KP    Y  LI G    G   E    L  M+ NG
Sbjct: 310 LLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENG 369

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
            + +   ++     + + G   KA++I+  M ++    N V Y  LI  LC+ G++ +A 
Sbjct: 370 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 429

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
           + + QM++ G  P++V ++S+++GLC     E A +L  EM  L+    P+   +N L+ 
Sbjct: 430 VKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEM--LDQGICPNAVFFNTLIC 487

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF-----LTALKEKLEAPQDGTDFL---- 603
            LC    +     L++ M   G  PD  +         LT   ++ E   DG   +    
Sbjct: 488 NLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSP 547

Query: 604 -----NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                N L        R    + +   ML+K ++P   T+  ++  L + KR   A
Sbjct: 548 TEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEA 603



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 219/454 (48%), Gaps = 21/454 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++  +  +  ++  +  K  +   +S L+++++ GL                    P+  
Sbjct: 335 IKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLS-------------------PDHH 375

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            FN+      + G++D A+ +F +M      P++  Y  L+D LCK  R+D+A +  ++M
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  V FN L+ GLC   +  RA +LV  M  +G  PN V +NTLI  LC  G +
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +   L+D M      P+  +Y  +I+G    GR  +  +V   M        E  Y+TL
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL 555

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + G     + +DA  L+++M+ KG  P  V Y+ ++ GL +  +  EA+E+   MIN+G 
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             + +TY+ ++ G  +S    +A ++++ +       N + ++++I  L + G+  +A  
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  + + G  P+VV Y  +   L   GS+EE   LF+ M   +  + P+    N L+  
Sbjct: 676 LFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAM--EKNGTAPNSQMLNALVRR 733

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           L  + +IS +   L+ + +R    +  T ++ ++
Sbjct: 734 LLHRGDISRAGAYLSKLDERNFSVEASTTSLLMS 767



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 151/345 (43%), Gaps = 8/345 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E A  L + M+D+  C   V  FN+++  +   G   R +E    I   +H+ + P+  +
Sbjct: 461 ERAEELVYEMLDQGICPNAV-FFNTLICNLCNVG---RVMEGRRLIDLMEHVGVRPDAFS 516

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +  +I   C  G  D A ++F  M      P   TY TL+ G C  +R+D+A  L  EM 
Sbjct: 517 YTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 576

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  VT+N +++GL +      A +L  NM   G   +  TYN +++GLC    +D
Sbjct: 577 RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVD 636

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A  +   + +     N +T+  +I  L+K GR  D   +  ++       N   Y  + 
Sbjct: 637 EAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVA 696

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L +EG  E+   L+  M + G  PN+ + +AL+  L   G    A   L ++     +
Sbjct: 697 ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 756

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
             A T S LM  F      H A    K + +     NE   S LI
Sbjct: 757 VEASTTSLLMSIFTSDEYQHHA----KSLPEKYHFLNEANSSALI 797


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/631 (25%), Positives = 288/631 (45%), Gaps = 90/631 (14%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
           F  +E +L  M+ +  +   ++F  +   +    LV+ A+  + T +   HC   V S N
Sbjct: 82  FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCN 141

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           S+LNV+++ G    A + Y+ +V+    N   +  T  +++K +C+ G V++  +L  + 
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMVDR---NGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKR 198

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             R C P+I  Y TL+DG CK+   + A +L  E+++ G  PT  T+  +ING CK G+ 
Sbjct: 199 WGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKF 258

Query: 279 G-----------------------------------RAAKLVDNMFLKGCLPNEVTYNTL 303
                                                AA  V  M   GC P+  TYN L
Sbjct: 259 EVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNIL 318

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C  G + KA  LL++ +    +PN+V+Y  +I+   K G  +    +L+ M ER  
Sbjct: 319 ITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGH 378

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+ LI GL   G+ + A+ +  +M+EKG  P+  +Y+ L+ GLC+ G+   A+ 
Sbjct: 379 KPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKV 438

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L EM++   A +AF  ++L+ GF   G   +A ++++   +       V Y+ +I G C
Sbjct: 439 LLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYC 498

Query: 484 EDGKLREARMVWTQMLS-----------------------------------RGCKPDVV 508
           + G +++A + + +M+                                      CKP+VV
Sbjct: 499 KFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVV 558

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +I+G C +G +  A K F +ML L  K  P+V TY IL+   CK  N++ +     
Sbjct: 559 TYTLLINGFCLSGDINRAEKTFKQMLSLRLK--PNVVTYTILIGCFCKGVNLTKACSFFE 616

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLE---APQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
            M+   C P+ VT N  +  L   ++   + Q      N L +  F             +
Sbjct: 617 QMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFG------------M 664

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           M+      + +++  ++  LC+ K ++ A++
Sbjct: 665 MISDGWDRRAASYNSILICLCQHKMVKHALH 695



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/538 (23%), Positives = 227/538 (42%), Gaps = 57/538 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I  +   G F+ ++ +L  M      V    +  I  A  K     EA      M
Sbjct: 244 TYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWM 303

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C   + ++N ++      G  H+A +     +      +LPN +++  +I   C+
Sbjct: 304 IKS-GCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKR---GLLPNKVSYTPLIHNYCK 359

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G    A+ L  +M  R  +PD+ TY  L+ GL     +D A+ + ++M   G  P    
Sbjct: 360 QGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANI 419

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NVL++GLCK G L  A  L+  M  +   P+     TL+ G    G+ ++A  L +  +
Sbjct: 420 YNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTI 479

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P  V Y  +I G  K G   D       M +     +E+ YST+I G  K     
Sbjct: 480 EKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLH 539

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A++++  M++  CKPN V Y+ LI+G C  G  + AE+   +M++     N  TY+ L+
Sbjct: 540 GALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILI 599

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL---------------------- 482
             F +     KA   ++ M    C+ N+V Y+ L++GL                      
Sbjct: 600 GCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVL 659

Query: 483 -------------------------CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
                                    C+   ++ A  +  +M+S+G  PD V+  +++HGL
Sbjct: 660 ESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGL 719

Query: 518 CNAGSVEEALKLFNEMLC--LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           C  G  ++    +N ++   L  +       Y+  L+A   Q   S +  +L+S+ D+
Sbjct: 720 CLEGRSQD----WNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLILHSLADQ 773


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  239 bits (611), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 162/553 (29%), Positives = 263/553 (47%), Gaps = 30/553 (5%)

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR-LFHTMVDEFHCKRTVKSFNSVLNVI 164
           L R     R +   +F+   K    A   +EA+  L H M D   C     S+N+V+  +
Sbjct: 182 LLRAGLRTRTIEANTFL---KCLCHAKRTDEAVDVLLHRMSD-LGCVPNAISYNTVIKSL 237

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
             +     AL+    +   +     P+ ++FN VI    + G V  A  L  EM  +  E
Sbjct: 238 CGDSRSQEALDMVQRMAK-EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVE 296

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           PD+ TY +++D LCK   +D+A L+L +M   G  P  +T+  +I+G   +G    +AK+
Sbjct: 297 PDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKM 356

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
              M  KG +P  VT+N+ +  LC  G    A  +   M     MP+ V+Y  +++G   
Sbjct: 357 FRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYAT 416

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            GR  D   +  SM ++    N + ++ LIS   K G  ++AM ++ +M  +G +P+ V 
Sbjct: 417 EGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVT 476

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD-M 463
           YS LI   CR+G+  +A E   +MI+ G   N   Y SL+ GF   G   KA E+  + M
Sbjct: 477 YSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMM 536

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
           +K     N V +S +IH LC +G++ +A  V+  ++  G +P +V ++S+I G C  G +
Sbjct: 537 SKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKM 596

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           E+A  + + M+ +    +PDV TYN L++  CK   I   + L   M+ +   P  VT +
Sbjct: 597 EKAFGVLDAMVSV--GIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYS 654

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           I L           DG          LF   RTS   K+   M+    +    T++ +++
Sbjct: 655 IVL-----------DG----------LFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLK 693

Query: 644 ELCRPKRIQAAIN 656
            LCR      AI 
Sbjct: 694 GLCRNDLTDEAIT 706



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 234/453 (51%), Gaps = 11/453 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ ++I  Y+ SG +K    +  +M  +     +V   SF+     +G++   EE   +F
Sbjct: 336 TYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEE---IF 392

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  + H    V S++ +L+    EG +      ++ + +     I+ N   FN++I  
Sbjct: 393 QYMTTKGHMPDLV-SYSILLHGYATEGRFADMNNLFHSMADK---GIVANCHCFNILISA 448

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G++D A+ +F EM  +   PD+ TY TL+   C+  RL +A+    +M   G  P 
Sbjct: 449 HAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPN 508

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-LPNEVTYNTLIHGLCLKGNLDKAVSLL 320
            V ++ LI+G C +G+L +A +LV  M  KG   PN V ++++IH LC +G +  A  + 
Sbjct: 509 TVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVF 568

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + ++     P  VT+ ++I+G   +G+      VL +M       +   Y+TL+SG  K 
Sbjct: 569 NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKS 628

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK +D + L+++M+ K  KP TV YS ++DGL   G+   A+++  EMI++G A +  TY
Sbjct: 629 GKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTY 688

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
             L+KG   +    +A+ ++  +   +C ++    + +I+ L +  +  EA  ++  + +
Sbjct: 689 KILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAIST 748

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            G  P+V  Y  MIH L   GSVEEA  +F+ M
Sbjct: 749 SGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSM 781



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/485 (26%), Positives = 228/485 (47%), Gaps = 61/485 (12%)

Query: 227 IYTYCTLMD-----------------------------------GLCKENRLDEAV-LLL 250
           ++TY  LMD                                    LC   R DEAV +LL
Sbjct: 156 VHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLL 215

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHGLC 308
             M   GC P  +++N +I  LC +     A  +V  M  +G  C P+ V++NT+IHG  
Sbjct: 216 HRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFF 275

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEERKFHVNE 367
            +G + KA +L++ MV     P+ VTY +I++ L K  RA+D A  VL  M ++    + 
Sbjct: 276 KQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCK-ARAMDKAELVLRQMVDKGVEPDG 334

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ +I G    G  +++ K++++M  KG  P  V +++ +  LC+ G+  +AEEI   
Sbjct: 335 LTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQY 394

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M   G   +  +YS L+ G+   G+      ++  MA    V N  C+++LI    + G 
Sbjct: 395 MTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGM 454

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + EA +V+T+M  +G +PDVV YS++I   C  G + +A++ F++M+ +    +P+   Y
Sbjct: 455 MDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISI--GLEPNTVVY 512

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCD-PDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           + L++  C   ++  + +L++ MM +G   P++V  +  + +L  +     D  D  N L
Sbjct: 513 HSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRV-MDAHDVFN-L 570

Query: 607 AIRLFKRQ----------------RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
            I +  R                 +    F +++ M+   + P   T+  +V   C+  +
Sbjct: 571 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGK 630

Query: 651 IQAAI 655
           I   +
Sbjct: 631 IDDGL 635



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 246/519 (47%), Gaps = 13/519 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ S++     +      E+VL +M  +       ++  I   Y  +   +E+ ++F  M
Sbjct: 301 TYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKM 360

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V +FNS ++ + + G    A E + ++    HM   P+ +++++++     
Sbjct: 361 TSKGLIPGIV-TFNSFMSSLCKHGRSKDAEEIFQYMTTKGHM---PDLVSYSILLHGYAT 416

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G   +   LF  M  +    + + +  L+    K   +DEA+L+  EMQ  G  P  VT
Sbjct: 417 EGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVT 476

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LI+  C+ G L  A +    M   G  PN V Y++LIHG C+ G+L KA  L+  M+
Sbjct: 477 YSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMM 536

Query: 325 ASKC-MPNEVTYGTIINGLVKLGRAVDGARV---LMSMEERKFHVNEYIYSTLISGLFKE 380
           +     PN V + +II+ L   GR +D   V   ++ + +R   V    +++LI G    
Sbjct: 537 SKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVT---FNSLIDGYCLV 593

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK E A  +   M+  G +P+ V Y+ L+ G C+ GK D+   +  EM++        TY
Sbjct: 594 GKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTY 653

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           S ++ G F +G+   A +++ +M  +    +   Y +L+ GLC +    EA  ++ ++ +
Sbjct: 654 SIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGA 713

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
             CK D+   +++I+ L      EEA  LF  +        P+V TY ++++ L K+ ++
Sbjct: 714 MDCKFDITILNTVINALYKVRRREEANDLFAAIS--TSGLVPNVSTYGVMIHNLLKEGSV 771

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             +  + +SM   GC P     N  +  L +K +  + G
Sbjct: 772 EEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKAG 810



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 137/575 (23%), Positives = 250/575 (43%), Gaps = 77/575 (13%)

Query: 100 KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCKRTVKSFN 158
           ++++++L+RM     V    S+  + K+       +EA+ +   M  E   C   V SFN
Sbjct: 209 EAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFN 268

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           +V++   ++G   +A    N +V      + P+ +T+N ++  +C+   +D A  + R+M
Sbjct: 269 TVIHGFFKQGEVSKACNLINEMVQK---GVEPDVVTYNSIVDALCKARAMDKAELVLRQM 325

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             +  EPD  TY  ++ G        E+  +  +M   G  P  VTFN  ++ LCK+G  
Sbjct: 326 VDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRS 385

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN-------------------------- 312
             A ++   M  KG +P+ V+Y+ L+HG   +G                           
Sbjct: 386 KDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNIL 445

Query: 313 ---------LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
                    +D+A+ +   M      P+ VTY T+I+   ++GR  D       M     
Sbjct: 446 ISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGL 505

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC------------------------- 398
             N  +Y +LI G    G    A +L  +MM KG                          
Sbjct: 506 EPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAH 565

Query: 399 -----------KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
                      +P  V +++LIDG C VGK ++A  +L  M++ G   +  TY++L+ G+
Sbjct: 566 DVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGY 625

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            +SGK    + ++++M         V YS+++ GL   G+   A+ ++ +M+  G   D+
Sbjct: 626 CKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDI 685

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
             Y  ++ GLC     +EA+ LF+++  ++ K   D+   N ++NAL K      + DL 
Sbjct: 686 DTYKILLKGLCRNDLTDEAITLFHKLGAMDCKF--DITILNTVINALYKVRRREEANDLF 743

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
            ++   G  P++ T  + +  L ++    +  T F
Sbjct: 744 AAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMF 778



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/347 (26%), Positives = 163/347 (46%), Gaps = 6/347 (1%)

Query: 112 EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
           E   V+  S I  F  +G    + +A  L   M+ +   +  +  F+S+++ +  EG   
Sbjct: 506 EPNTVVYHSLIHGFCMHGD---LVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVM 562

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            A + +N ++   H+   P  +TFN +I   C +G ++ A  +   M     EPD+ TY 
Sbjct: 563 DAHDVFNLVI---HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYN 619

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           TL+ G CK  ++D+ ++L  EM      PT VT++++++GL   G    A K+   M   
Sbjct: 620 TLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDS 679

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G   +  TY  L+ GLC     D+A++L  ++ A  C  +     T+IN L K+ R  + 
Sbjct: 680 GTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEA 739

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +  ++       N   Y  +I  L KEG  E+A  ++  M + GC P++ + + +I  
Sbjct: 740 NDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRM 799

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
           L + G   +A   + ++     +  A T S LM  F   GK  + ++
Sbjct: 800 LLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIK 846


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/420 (31%), Positives = 232/420 (55%), Gaps = 5/420 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           +L+ + H+V  +    LP+   F+ ++  + ++   D  I L+ +M +     ++ T   
Sbjct: 65  SLDLFFHMVQCRP---LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C+ ++L  A+  L +M   G  P+ VTF  L+NG C+   +  A  + D M   G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN V YNT+I GLC    +D A+ LL+RM      P+ VTY ++I+GL   GR  D  
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R++  M +R+ + + + ++ LI    KEG+  +A + +++M+ +   P+ V YS LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   + DEAEE+   M++ GC  +  TYS L+ G+ +S K    ++++ +M++   V N 
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y++LI G C  GKL  A  ++ +M+  G  P+++ Y+ ++HGLC+ G +E+AL +  +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   +     D+ TYNI++  +CK   ++ + D+  S+  +G  PD+ T    +  L +K
Sbjct: 422 M--QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/447 (29%), Positives = 230/447 (51%), Gaps = 10/447 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKR--TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           +++++ LF  MV    C+   ++  F+ +L+ I +   Y   +  +  +   + + I  N
Sbjct: 62  LDDSLDLFFHMV---QCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM---QMLGIPHN 115

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             T N+++   CR   +  A+    +M     EP I T+ +L++G C+ +R+ +A+ + D
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           +M   G  P  V +N +I+GLCK+ ++  A  L++ M   G  P+ VTYN+LI GLC  G
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
               A  ++  M   +  P+  T+  +I+  VK GR  +       M  R    +   YS
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI GL    + ++A +++  M+ KGC P+ V YS LI+G C+  K +   ++  EM   
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  TY+ L++G+  +GK + A EI++ M       N + Y+VL+HGLC++GK+ +A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
            ++   M   G   D+V Y+ +I G+C AG V +A  ++  + C      PD++TY  ++
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNC--QGLMPDIWTYTTMM 473

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPD 578
             L K+     +  L   M + G  P+
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 192/386 (49%), Gaps = 2/386 (0%)

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R   +D+++ LF  M      P I  +  L+  + K  + D  + L ++MQ+ G      
Sbjct: 58  RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T N+L+N  C+  +L  A   +  M   G  P+ VT+ +L++G C    +  A+ + D+M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V     PN V Y TII+GL K  +  +   +L  ME+     +   Y++LISGL   G+ 
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            DA ++   M ++   P+   ++ALID   + G+  EAEE   EMI      +  TYS L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G     +  +A E++  M    C  + V YS+LI+G C+  K+     ++ +M  RG 
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             + V Y+ +I G C AG +  A ++F  M+       P++ TYN+LL+ LC    I  +
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC--GVHPNIITYNVLLHGLCDNGKIEKA 415

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + +L  M   G D D+VT NI +  +
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGM 441



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 5/356 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   + +   V +A+ +F  MV   + K  V  +N++++ + +      AL+  N 
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGY-KPNVVIYNTIIDGLCKSKQVDNALDLLNR 211

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   +   I P+ +T+N +I  +C  G   +A ++   M  R   PD++T+  L+D   K
Sbjct: 212 M---EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E R+ EA    +EM      P  VT+++LI GLC    L  A ++   M  KGC P+ VT
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+ LI+G C    ++  + L   M     + N VTY  +I G  + G+      +   M 
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
               H N   Y+ L+ GL   GK E A+ +   M + G   + V Y+ +I G+C+ G+  
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           +A +I   +   G   + +TY+++M G ++ G   +A  +++ M ++  + NE CY
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE-CY 503



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 145/299 (48%), Gaps = 16/299 (5%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S L+S + K  K +  + LW+QM   G   N    + L++  CR  +   A   L +MI
Sbjct: 84  FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  T+ SL+ GF    + + A+ ++  M       N V Y+ +I GLC+  ++ 
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  +  +M   G  PDVV Y+S+I GLC++G   +A ++ + M   + +  PDVFT+N 
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT--KREIYPDVFTFNA 261

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFL---- 603
           L++A  K+  +S + +    M+ R  DPD+VT ++ +  L    +L+  ++   F+    
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321

Query: 604 --------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   + L     K ++   G K+   M Q+ +   T T+  ++Q  CR  ++  A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380


>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g19440, chloroplastic-like [Cucumis sativus]
          Length = 799

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 164/535 (30%), Positives = 270/535 (50%), Gaps = 18/535 (3%)

Query: 55  PQGNAKSEQ---PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEM-----VL 106
           P  N  SE+     ++ +F  T  +G ++   + F  LI  Y  S  F++L       V 
Sbjct: 118 PVLNLDSEKFHIEIANALFGLTSVVGRFEWTQA-FDLLIHVY--STQFRNLGFSCAVDVF 174

Query: 107 YRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ 166
           Y + R+      K+  F   +  KA+  E+   +F  M  E  C   V SF +V+N + +
Sbjct: 175 YLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVM-SEGACP-DVFSFTNVINALCK 232

Query: 167 EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
            G    A+E +   +  + + I PN +T+N +I  +C+ G +DNA +L  +M V+  +P+
Sbjct: 233 GGKMENAIELF---MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPN 289

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
           + TY  L++GL K N  D+   +LDEM   G  P  V FN LI+G CK G +  A K+ D
Sbjct: 290 LKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKD 349

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M  K   P  VT  +L+ G C    ++ A + L+ +++S    +     ++++ L K  
Sbjct: 350 VMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKF 409

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           R     R    M  R F  ++ + + L+ GL K+GK  +A +LW +++EKG   + V  +
Sbjct: 410 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 469

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           ALI GLC  GK  EA  I+ EM+  G   +  TY++L+ GF   GK      + ++M K 
Sbjct: 470 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 529

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               +   Y+ L+ GLC  GKL +A  +W +  + G   ++  Y  M+ G C A  +E+ 
Sbjct: 530 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
             LFNE+  L  K + +   YNI++ A C+  N++ ++ LL +M  +G  P+  T
Sbjct: 590 ENLFNEL--LSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCAT 642



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 230/465 (49%), Gaps = 23/465 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  +F  VI  +C+ G ++NAI+LF +M      P++ TY  +++GLC+  RLD A  L
Sbjct: 218 PDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFEL 277

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            ++M V G  P   T+  LINGL K     +   ++D M   G  PN V +N LI G C 
Sbjct: 278 KEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCK 337

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            GN++ A+ + D M++    P  VT  +++ G  K  +       L  +      ++   
Sbjct: 338 MGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDN 397

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
             +++  L K+ +   A +  K M+ +  +P+ ++ + L+ GLC+ GK  EA E+ F ++
Sbjct: 398 CYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLL 457

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G  A+  T ++L+ G   +GK  +A  I K+M +     + + Y+ LI G C +GK+ 
Sbjct: 458 EKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVE 517

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
               +  +M  RG +PD+  Y+ ++ GLCN G +++A+KL++E       S  ++ TY I
Sbjct: 518 GCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLIS--NIHTYGI 575

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           ++   CK + I    +L N ++ +  + + +  NI + A        Q+G          
Sbjct: 576 MMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKA------HCQNG---------- 619

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  +   +++E M  K + P  +T+  ++  +C    ++ A
Sbjct: 620 -----NVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDA 659



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 142/547 (25%), Positives = 249/547 (45%), Gaps = 70/547 (12%)

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII 165
           ++R+  E       SF  +  A  K   +E AI LF  M ++      V ++N ++N + 
Sbjct: 208 VFRVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKM-EKLGISPNVVTYNCIINGLC 266

Query: 166 QEGLYHRALEF---------------YNHIVNA--------KHMNIL---------PNTL 193
           Q G    A E                Y  ++N         K  +IL         PN +
Sbjct: 267 QNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVV 326

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            FN +I   C++G ++ A+++   M  +N  P   T  +LM G CK ++++ A   L+E+
Sbjct: 327 VFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEI 386

Query: 254 -------QVDGCF----------------------------PTPVTFNVLINGLCKNGEL 278
                    D C+                            P+ +   +L+ GLCK+G+ 
Sbjct: 387 LSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKH 446

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A +L   +  KG   ++VT N LIHGLC  G L +A  ++  M+      + +TY  +
Sbjct: 447 LEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNAL 506

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I G    G+     R+   M +R    + Y Y+ L+ GL   GK +DA+KLW +    G 
Sbjct: 507 ILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGL 566

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
             N   Y  +++G C+  + ++ E +  E+++     N+  Y+ ++K   ++G    A++
Sbjct: 567 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ 626

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           + ++M     + N   YS LIHG+C  G + +A+ +  +M   G  P+VV Y+++I G C
Sbjct: 627 LLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC 686

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G ++ A   + EM+       P+ FTY ++++  CK  N+  + +LL  M + G  PD
Sbjct: 687 KLGQMDTAESTWLEMISF--NIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPD 744

Query: 579 LVTCNIF 585
           +VT N+ 
Sbjct: 745 VVTYNVL 751



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 185/379 (48%), Gaps = 3/379 (0%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A+ +F  +  +   P + T    +  L K N  ++   +   M    C P   +F  +IN
Sbjct: 170 AVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGAC-PDVFSFTNVIN 228

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            LCK G++  A +L   M   G  PN VTYN +I+GLC  G LD A  L ++M      P
Sbjct: 229 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 288

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N  TYG +INGL+KL        +L  M    F+ N  +++ LI G  K G  E A+K+ 
Sbjct: 289 NLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIK 348

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M+ K   P +V   +L+ G C+  + + AE  L E++++G + +     S++    + 
Sbjct: 349 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 408

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            + H A    K M   N   +++  ++L+ GLC+DGK  EA  +W ++L +G     V  
Sbjct: 409 FRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTS 468

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++IHGLC AG + EA ++  EML  E     D  TYN L+   C +  +     L   M
Sbjct: 469 NALIHGLCGAGKLPEASRIVKEML--ERGLPMDRITYNALILGFCNEGKVEGCFRLREEM 526

Query: 571 MDRGCDPDLVTCNIFLTAL 589
             RG  PD+ T N  L  L
Sbjct: 527 TKRGIQPDIYTYNFLLRGL 545



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 111/375 (29%), Positives = 188/375 (50%), Gaps = 3/375 (0%)

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           SV++ + ++  YH A  F   +++    N  P+ L   +++  +C+ G    A +L+  +
Sbjct: 400 SVVHWLCKKFRYHSAFRFTKMMLSR---NFRPSDLLLTMLVCGLCKDGKHLEATELWFRL 456

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             +       T   L+ GLC   +L EA  ++ EM   G     +T+N LI G C  G++
Sbjct: 457 LEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKV 516

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
               +L + M  +G  P+  TYN L+ GLC  G LD A+ L D   AS  + N  TYG +
Sbjct: 517 EGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIM 576

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           + G  K  R  D   +   +  +K  +N  +Y+ +I    + G    A++L + M  KG 
Sbjct: 577 MEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGI 636

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PN   YS+LI G+C +G  ++A+ ++ EM   G   N   Y++L+ G+ + G+   A  
Sbjct: 637 LPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAES 696

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
            W +M   N   N+  Y+V+I G C+ G + +A  +  +M   G  PDVV Y+ + +G C
Sbjct: 697 TWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFC 756

Query: 519 NAGSVEEALKLFNEM 533
            A  ++ A K+ ++M
Sbjct: 757 KANDMDNAFKVCDQM 771



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 201/436 (46%), Gaps = 12/436 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T YSL+Q +  S   +  E  L  +      +   +   +     K      A R    M
Sbjct: 362 TLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMM 421

Query: 145 VDEFHCKRTVKSFNSVLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +      R  +  + +L +++    ++G +  A E +  ++         + +T N +I 
Sbjct: 422 LS-----RNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSP---ASKVTSNALIH 473

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C  G +  A ++ +EM  R    D  TY  L+ G C E +++    L +EM   G  P
Sbjct: 474 GLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQP 533

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T+N L+ GLC  G+L  A KL D     G + N  TY  ++ G C    ++   +L 
Sbjct: 534 DIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLF 593

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + +++ K   N + Y  II    + G      ++L +M+ +    N   YS+LI G+   
Sbjct: 594 NELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNI 653

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G  EDA  L  +M ++G  PN V Y+ALI G C++G+ D AE    EMI+     N FTY
Sbjct: 654 GLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTY 713

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G+ + G   KA  +   M ++  V + V Y+VL +G C+   +  A  V  QM +
Sbjct: 714 TVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMAT 773

Query: 501 RGCKPDVVAYSSMIHG 516
            G   D + Y++++HG
Sbjct: 774 EGLPVDEITYTTLVHG 789



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 141/260 (54%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I P+  T+N +++ +C +G +D+AI+L+ E        +I+TY  +M+G CK NR+++  
Sbjct: 531 IQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVE 590

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L +E+         + +N++I   C+NG +  A +L++NM  KG LPN  TY++LIHG+
Sbjct: 591 NLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGV 650

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G ++ A  L+D M     +PN V Y  +I G  KLG+        + M     H N+
Sbjct: 651 CNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNK 710

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + Y+ +I G  K G  E A  L  +M E G  P+ V Y+ L +G C+    D A ++  +
Sbjct: 711 FTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQ 770

Query: 428 MINNGCAANAFTYSSLMKGF 447
           M   G   +  TY++L+ G+
Sbjct: 771 MATEGLPVDEITYTTLVHGW 790



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 28/219 (12%)

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           F  SSL+K    + +  K  E+++ M++  C  +   ++ +I+ LC+ GK+  A  ++ +
Sbjct: 191 FXLSSLVK----ANEFEKCCEVFRVMSEGACP-DVFSFTNVINALCKGGKMENAIELFMK 245

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M   G  P+VV Y+ +I+GLC  G ++ A +L  +M       QP++ TY  L+N L K 
Sbjct: 246 MEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTV--KGVQPNLKTYGALINGLIKL 303

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
           +       +L+ M+  G +P++V                       N L     K     
Sbjct: 304 NFFDKVNHILDEMIGAGFNPNVVV---------------------FNNLIDGYCKMGNIE 342

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           G  KI +VM+ K ++P + T   ++Q  C+  +I+ A N
Sbjct: 343 GALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAEN 381


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 173/622 (27%), Positives = 286/622 (45%), Gaps = 76/622 (12%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           F +LI  Y  +G+      ++ RMR+E  +    S+  +   + K    ++A  L H + 
Sbjct: 150 FNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEIS 209

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN---HIVNAKHMNILPNTLTFNLVIKTV 202
           +    K +V                     F+N    I    ++N+  + +T+  +I T 
Sbjct: 210 ESRGVKDSV---------------------FFNIDDRIKKDDNLNLEADLITYTTIISTY 248

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+   ++ A  L+ EM +    PD+ TY ++++GLCK+ RL EA  LL EM+  G  P  
Sbjct: 249 CKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNH 308

Query: 263 VTFNVLINGLCKNGELGRA-------------------AKLVDNMFLKG----------- 292
           V +  LI+ L K G    A                     LVD +F              
Sbjct: 309 VAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRA 368

Query: 293 -----CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                 +PN +TY  LI G C  G++++  SLL  M      PN +TY +IING  K G 
Sbjct: 369 LSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGI 428

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +   V+  M ++    N Y+Y+ LI G  K GK E A  L+ +M   G K N V++  
Sbjct: 429 LDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDV 488

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           L++ L R  + DEAEE+L ++ + G   +   Y+SLM GFF++GK   A+ + ++M + +
Sbjct: 489 LVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKS 548

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
             ++ V Y+VLI+GL E GK  EA+ V++ M+  G  P+   Y+ MI   C  G ++ AL
Sbjct: 549 IPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNAL 607

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           +L+NEM     K  P   T N L+  L +   I  ++++LN M   G  P+LV   + L 
Sbjct: 608 ELWNEM--KSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLN 665

Query: 588 ALKEK------LEAPQDGTDF--------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           A  +       L+  +   D          N L +   + + T     +++ M++     
Sbjct: 666 ASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVA 725

Query: 634 QTSTWERVVQELCRPKRIQAAI 655
            T T+  +++  C    ++ A+
Sbjct: 726 DTVTYNALIRGYCESSHVKKAL 747



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 166/600 (27%), Positives = 280/600 (46%), Gaps = 18/600 (3%)

Query: 56  QGNAKSEQPF-SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKR 114
            G  KS +P  ++++F +  KL        T+ +LI  Y   GD + +E +L  M  +  
Sbjct: 351 DGLFKSSKPKEAEDMFRALSKLNLIP-NSITYTALIDGYCKVGDMERVESLLQEMEEKHI 409

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
                ++  I   Y K  +++EAI +   M+D+ +       +  +++   + G    A 
Sbjct: 410 NPNVITYSSIINGYTKKGILDEAINVMKKMLDQ-NIIPNAYVYAILIDGYCKAGKQEIAT 468

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           + YN +   K   +  N + F++++  + R   +D A +L +++  R    D   Y +LM
Sbjct: 469 DLYNEM---KLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLM 525

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           DG  K  +   A+ +++EM         VT+NVLINGL ++G+   A  +   M   G  
Sbjct: 526 DGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EAKSVYSGMIEMGLA 584

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN+ TYN +I   C +G LD A+ L + M + K MP+ +T  T++ GL + G       V
Sbjct: 585 PNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNV 644

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M     H N  I+  L++   K GKA   +++ +Q+++ G K N   Y+ LI   CR
Sbjct: 645 LNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCR 704

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +    +A  +L  MI +G  A+  TY++L++G+ ES    KA+  +  M       N V 
Sbjct: 705 LRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVT 764

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y++L+ GL   G + E   ++ +M   G  PD   Y ++I G    G+ +E+++L+ EM+
Sbjct: 765 YNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMV 824

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
                  P   TYN+L++   K   +  + +LLN M  RG  P   T +I +       +
Sbjct: 825 A--QGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWCNLSK 882

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            P        +L   L K  RT     I E M  K   P  ST   +     RP ++  A
Sbjct: 883 HP--------DLDRTLKKIYRTDAKNLITE-MNDKGFVPCKSTIACISSTFARPGKMLDA 933



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/506 (27%), Positives = 243/506 (48%), Gaps = 39/506 (7%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +++++  +T+T+N VI   C+ GLV+ A      M  ++   D  T   L+ G C+    
Sbjct: 69  RNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLA 128

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
                ++D +   G     + FN LI+G CK GE+  A  LV+ M  +G L + V+YNTL
Sbjct: 129 KYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTL 188

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEV---------------------TYGTIINGL 342
           I+G C +G  DKA SLL  +  S+ + + V                     TY TII+  
Sbjct: 189 INGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTY 248

Query: 343 VKLGRAVDGARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
            K    ++ AR L   M    F  +   YS++++GL K+G+  +A +L ++M + G  PN
Sbjct: 249 CK-QHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPN 307

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V Y+ LID L + G   EA     +++  G   +    ++L+ G F+S K  +A ++++
Sbjct: 308 HVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFR 367

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            ++K N + N + Y+ LI G C+ G +     +  +M  +   P+V+ YSS+I+G    G
Sbjct: 368 ALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKG 427

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            ++EA+ +  +M  L+    P+ + Y IL++  CK      + DL N M   G   + V 
Sbjct: 428 ILDEAINVMKKM--LDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVL 485

Query: 582 CNIFLTALK------EKLEAPQDGT------DFLNELAIR--LFKRQRTSGGFKIVEVML 627
            ++ +  LK      E  E  +D T      D +N  ++    FK  + S    +VE M 
Sbjct: 486 FDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMT 545

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQA 653
           +K +     T+  ++  L    + +A
Sbjct: 546 EKSIPFDVVTYNVLINGLLEHGKYEA 571



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 193/440 (43%), Gaps = 42/440 (9%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M+     PT + +N LI      G + +   +   M      PN  T+N L+H  C  GN
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           L  A+ LL R V  +   + VTY T+I G  + G        L  M ++    +    + 
Sbjct: 61  LILALDLL-RNVDVEV--DTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ G  + G A+   ++   ++  G   + + ++ LIDG C+ G+   A +++  M   G
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV------------------- 473
             ++  +Y++L+ GF + G+  KA  +  +++++  V + V                   
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237

Query: 474 --CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y+ +I   C+   L EAR ++ +M+  G  PDVV YSS+++GLC  G + EA +L  
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           EM  +     P+   Y  L+++L K  +   +    + ++ RG   DLV C   +  L  
Sbjct: 298 EMKKM--GVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLF- 354

Query: 592 KLEAPQDGTDFLNELA-IRLFKRQRT----------SGGFKIVEVMLQ----KFLSPQTS 636
           K   P++  D    L+ + L     T           G  + VE +LQ    K ++P   
Sbjct: 355 KSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVI 414

Query: 637 TWERVVQELCRPKRIQAAIN 656
           T+  ++    +   +  AIN
Sbjct: 415 TYSSIINGYTKKGILDEAIN 434


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 231/443 (52%), Gaps = 5/443 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA R+F  M  E +C+    +++ +++ + + G    A +    +V        P+T T+
Sbjct: 247 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK---GCQPSTRTY 303

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
            ++IK  C +G+ D A+++  EM  + C P+++TY  L+D LC+E +++EA  +  +M  
Sbjct: 304 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 363

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P  +TFN LING CK G +  A +L+  M    C PN  TYN L+ GLC      K
Sbjct: 364 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 423

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  LL R+V +  +P+ VTY  +++G  K G+      +  SM       + + ++ LI 
Sbjct: 424 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 483

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL K G+ E A  +   M++KG   + V ++ALIDG C++GK  +   +   M+ N C  
Sbjct: 484 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 543

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
            A T++  +    +  K ++A  +   M K   V + V +++LI G C  G+   +  + 
Sbjct: 544 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 603

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M   GC P+V  Y+ +I+GLCN G VEEA  +   M        P+ FTY +L+ A  
Sbjct: 604 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSF--GVSPNHFTYAVLVKAHV 661

Query: 556 KQSNISHSIDLLNSMMDRGCDPD 578
           K   +  +  ++++M+  GC P+
Sbjct: 662 KAGRLDRAFQIVSTMVKNGCQPN 684



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 211/406 (51%), Gaps = 2/406 (0%)

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           +K  N  PN++T++++I  +C  G ++ A QL +EM  + C+P   TY  L+   C    
Sbjct: 256 SKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 315

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            D+A+ +LDEM    C P   T+ +LI+ LC+ G++  A  +   M   G  P  +T+N 
Sbjct: 316 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 375

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI+G C +G +  A  LL  M    C PN  TY  ++ GL ++ ++     +L  + +  
Sbjct: 376 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 435

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              +   Y+ L+ G  KEG+   A  ++  M   G +P+   ++ALIDGLC++G+ ++A 
Sbjct: 436 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 495

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            IL  M+  G + +  T+++L+ G  + GK      ++++M +N C+     ++  +  L
Sbjct: 496 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 555

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            +D KL EA  +  +M+  G  P VV ++ +I G C AG    +LK+   M   +    P
Sbjct: 556 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK--QAGCSP 613

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +V+TY I++N LC    +  +  +L SM   G  P+  T  + + A
Sbjct: 614 NVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 659



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 239/478 (50%), Gaps = 22/478 (4%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           +++  + KA     + ++A+++   M  +  C   V ++  +++ + +EG    A   + 
Sbjct: 301 RTYTVLIKAKCDIGMTDKAMKMLDEMATK-ACVPNVHTYTILIDRLCREGKIEEANGVFR 359

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++  KH  + P  +TFN +I   C+ G V +A QL   M   NC+P+I TY  LM+GLC
Sbjct: 360 KML--KH-GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 416

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           + ++  +A LLL  +  +G  P  VT+N+L++G CK G+L  A  + ++M   G  P+  
Sbjct: 417 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 476

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T+  LI GLC  G L++A  +L  MV      +EVT+  +I+G  K+G+A D   +  +M
Sbjct: 477 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E +     + ++  +  L K+ K  +A  +  +MM+ G  P+ V ++ LI+G CR G+ 
Sbjct: 537 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 596

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             + ++L  M   GC+ N +TY+ ++ G   +G+  +A  I   M+      N   Y+VL
Sbjct: 597 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 656

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF-------- 530
           +    + G+L  A  + + M+  GC+P+   YS+++ G   + +   A  L         
Sbjct: 657 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDAR 716

Query: 531 ------NEMLCLEPKSQ----PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
                 N+  CL  + +    P    YN L+  LCK+  I  +  L   M+  G  PD
Sbjct: 717 SLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD 774



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 222/463 (47%), Gaps = 24/463 (5%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           + +  V+  +C+ G V  A     ++       D +   +L+   C+ + L EA  + ++
Sbjct: 195 IDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEK 254

Query: 253 M-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           M + + C P  VT+++LI+GLC+ G L  A +L   M  KGC P+  TY  LI   C  G
Sbjct: 255 MSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIG 314

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
             DKA+ +LD M    C+PN  TY  +I+ L + G+  +   V   M +         ++
Sbjct: 315 MTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFN 374

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+G  KEG    A +L   M +  CKPN   Y+ L++GLCRV K  +A  +L  +++N
Sbjct: 375 ALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN 434

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  TY+ L+ GF + G+ + A  I+  M       +   ++ LI GLC+ G+L +A
Sbjct: 435 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQA 494

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +   M+ +G   D V ++++I G C  G  ++   LF  M+  E +      T+N  L
Sbjct: 495 NGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV--ENRCLTTAHTFNCFL 552

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           +AL K   ++ +  +L  MM  G  P +VT  I +           +G     E A+ L 
Sbjct: 553 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI-----------EGHCRAGETALSL- 600

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    K++E M Q   SP   T+  ++  LC   R++ A
Sbjct: 601 ---------KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEA 634



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 219/454 (48%), Gaps = 7/454 (1%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A  ++  MV+E      +  + +V+N + + G    A  F   ++    +    +T    
Sbjct: 178 AFLVYRRMVNEGFVLGGI-DYRTVVNALCKNGFVQAAEMFCCKVL---RLGFGLDTHVCT 233

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
            ++   CR   +  A ++F +M    NC P+  TY  L+ GLC+  RL+EA  L  EM  
Sbjct: 234 SLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVE 293

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            GC P+  T+ VLI   C  G   +A K++D M  K C+PN  TY  LI  LC +G +++
Sbjct: 294 KGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEE 353

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +  +M+     P  +T+  +ING  K G  V   ++L  ME+     N   Y+ L+ 
Sbjct: 354 ANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELME 413

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL +  K+  A  L +++++ G  P+ V Y+ L+DG C+ G+ + A  I   M + G   
Sbjct: 414 GLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEP 473

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           + FT+++L+ G  + G+  +A  I   M K     +EV ++ LI G C+ GK ++   ++
Sbjct: 474 DGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLF 533

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M+   C      ++  +  L     + EA  +  +M+  +    P V T+ IL+   C
Sbjct: 534 ENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM--KYGLVPSVVTHTILIEGHC 591

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +    + S+ +L  M   GC P++ T  I +  L
Sbjct: 592 RAGETALSLKMLERMKQAGCSPNVYTYTIIINGL 625



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 38/361 (10%)

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y TL+  L K N    A L+   M  +G     + +  ++N LCKNG +  A      + 
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 221

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLGRA 348
             G   +     +L+   C + +L +A  + ++M   + C PN VTY             
Sbjct: 222 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTY------------- 268

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                                 S LI GL + G+ E+A +L ++M+EKGC+P+T  Y+ L
Sbjct: 269 ----------------------SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 306

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I   C +G  D+A ++L EM    C  N  TY+ L+      GK  +A  +++ M K+  
Sbjct: 307 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 366

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
               + ++ LI+G C++G +  A  + + M    CKP++  Y+ ++ GLC      +A  
Sbjct: 367 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 426

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L   ++  +    PD  TYNIL++  CK+  ++ + ++ NSM   G +PD  T    +  
Sbjct: 427 LLRRVV--DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 484

Query: 589 L 589
           L
Sbjct: 485 L 485



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 135/326 (41%), Gaps = 58/326 (17%)

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           NG+VKL  A+DG      M E  F ++   YSTL+  L K      A  ++++M+ +G  
Sbjct: 138 NGVVKLMGALDG------MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFV 191

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
              + Y  +++ LC+ G    AE               F    L  GF            
Sbjct: 192 LGGIDYRTVVNALCKNGFVQAAE--------------MFCCKVLRLGFG----------- 226

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML-SRGCKPDVVAYSSMIHGLC 518
                    +   VC S+++   C    L EA  V+ +M     C+P+ V YS +IHGLC
Sbjct: 227 ---------LDTHVCTSLVLAN-CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLC 276

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
            AG +EEA +L  EM  +E   QP   TY +L+ A C       ++ +L+ M  + C P+
Sbjct: 277 EAGRLEEAFQLKQEM--VEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPN 334

Query: 579 LVTCNIFLTAL--KEKLEAPQD------------GTDFLNELAIRLFKRQRTSGGFKIVE 624
           + T  I +  L  + K+E                G    N L     K       F+++ 
Sbjct: 335 VHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS 394

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKR 650
           VM +    P   T+  +++ LCR  +
Sbjct: 395 VMEKGNCKPNIRTYNELMEGLCRVSK 420



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 139/358 (38%), Gaps = 54/358 (15%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           ++ I  S  K G   L + TF +LI  +   G  K +  +   M   + +    +F    
Sbjct: 494 ANGILGSMVKKG-ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 552

Query: 126 KAYGKAHLVEEAIRLF--------------HTMVDEFHC---------------KRTVKS 156
            A GK + + EA  +               HT++ E HC               K+   S
Sbjct: 553 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 612

Query: 157 FNSVLNVIIQEGLYH--RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
            N     II  GL +  R  E    + +     + PN  T+ +++K   + G +D A Q+
Sbjct: 613 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQI 672

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-----------CF---- 259
              M    C+P+ + Y  L+ G    N    A  L     +D            C     
Sbjct: 673 VSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEI 732

Query: 260 -----PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
                PT   +N L+ GLCK G +  A +L  +M   G  P++   +++I   C     D
Sbjct: 733 KKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKYD 791

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
             +  +  ++ +K +P+  +Y  +I+GL   GR V  A+ L+S   R   + E +  T
Sbjct: 792 NCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGR-VQEAQKLVSDLVRHTGIEEEVEVT 848


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/423 (32%), Positives = 231/423 (54%), Gaps = 8/423 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
           + N++L  +   G    AL F++H++  + H++     +++  +I  +C+ G    A+QL
Sbjct: 125 TVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLD----QVSYGTLINGLCKSGETRAALQL 180

Query: 215 FREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
            R++  +    PD+  Y  ++D  CK+  + +A  L  EM V   +P  VTFN LI G C
Sbjct: 181 LRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFC 240

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G+L  A  L++ M L    PN  T+N LI GLC +G + KA S+L  M+     PN V
Sbjct: 241 IVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVV 300

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY ++++G   +        V  ++  R    N + YS +I+GL K    ++A+KL+K+M
Sbjct: 301 TYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEM 360

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             K   PNTV YS+LIDGLC+ G+  +  +++ E+ N G  AN  TY+SL+ G  ++ + 
Sbjct: 361 HLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQV 420

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            KA+ +   M       +   Y+ L+ GLC++G+L++A+ ++  +L +G   ++  Y+ M
Sbjct: 421 DKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVM 480

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I+GLC  G  +EAL L ++M   +    PD  TY  L++AL K +    ++ LL  M+ R
Sbjct: 481 INGLCKEGFFDEALSLLSQM--EDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538

Query: 574 GCD 576
             D
Sbjct: 539 ESD 541



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 214/404 (52%), Gaps = 9/404 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T+T N +++ +C  G V  A+     +  +    D  +Y TL++GLCK      A+ L
Sbjct: 121 PDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQL 180

Query: 250 LDEMQVDGCF---PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           L   +++G     P  + +  +I+  CK+  +  A  L   M +K   PN VT+N+LI+G
Sbjct: 181 LR--KIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYG 238

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C+ G L +AV LL+ M  +   PN  T+  +I+GL K G       VL  M ++    N
Sbjct: 239 FCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPN 298

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y++L+ G F   +   A  ++  +  +G  PN   YS +I+GLC+    DEA ++  
Sbjct: 299 VVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFK 358

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM       N  TYSSL+ G  +SG+     ++  ++       N + Y+ L++GLC++ 
Sbjct: 359 EMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNH 418

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP-DVF 545
           ++ +A  + T+M   G +PD+  Y++++ GLC  G +++A +++ ++LC   K  P ++ 
Sbjct: 419 QVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLC---KGYPLNIR 475

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            Y +++N LCK+     ++ LL+ M D GC PD VT    ++AL
Sbjct: 476 MYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISAL 519



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 219/420 (52%), Gaps = 9/420 (2%)

Query: 173 ALEFYNHIVNAKHMN-ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
           A+  +NHI+   HMN   P    FN ++ ++ ++     AI   ++M ++  +P+++T+ 
Sbjct: 36  AVSSFNHIL---HMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L++      +L+ A  ++ ++   G  P  VT N L+ GLC NG++  A    D++  K
Sbjct: 93  ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVD 350
               ++V+Y TLI+GLC  G    A+ LL ++     + P+ + Y  II+   K    +D
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVID 212

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +   M  +K + N   +++LI G    G+ ++A+ L  +M      PN   ++ LID
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC+ G+  +A  +L  MI  G   N  TY+SLM G+F   + +KA  ++  ++      
Sbjct: 273 GLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTP 332

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N   YSV+I+GLC++  + EA  ++ +M  +   P+ V YSS+I GLC +G + +   L 
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLI 392

Query: 531 NEMLCLEPKSQP-DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +E   +  + QP ++ TYN LLN LCK   +  +I LL  M D G  PD+ T    +  L
Sbjct: 393 DE---INNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGL 449



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/449 (30%), Positives = 223/449 (49%), Gaps = 25/449 (5%)

Query: 208 VDNAIQLFRE-MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
           +D+A+  F   + + N  P I+ +  ++  L K N    A+    +M++ G  P   TFN
Sbjct: 33  LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +LIN      +L  A  +V  +   G  P+ VT NTL+ GLCL G + +A++  D ++  
Sbjct: 93  ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI-YSTLISGLFKEGKAED 385
           +   ++V+YGT+INGL K G      ++L  +E       + I Y+ +I    K+    D
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVID 212

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A  L+ +M+ K   PN V +++LI G C VG+  EA  +L EM  N    N +T++ L+ 
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G  + G+  KA  +   M K     N V Y+ L+ G     ++ +A+ V+  +  RG  P
Sbjct: 273 GLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTP 332

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           +V +YS MI+GLC    V+EA+KLF EM        P+  TY+ L++ LCK   IS   D
Sbjct: 333 NVHSYSVMINGLCKNKMVDEAVKLFKEMHL--KNMTPNTVTYSSLIDGLCKSGRISDVWD 390

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
           L++ + +RG   +++T N  L  L +  +  +         AI L  + +  G       
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDK---------AIALLTKMKDEG------- 434

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                + P  ST+  +V  LC+  R++ A
Sbjct: 435 -----IQPDMSTYTTLVDGLCKNGRLKDA 458



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 148/279 (53%), Gaps = 16/279 (5%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL------YHRALEFY---NHIVNAK 184
           V   +  F+ ++D    +  VK   SVL+V+I++G+      Y   ++ Y     +  AK
Sbjct: 260 VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAK 319

Query: 185 HM-------NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           H+        + PN  +++++I  +C+  +VD A++LF+EM ++N  P+  TY +L+DGL
Sbjct: 320 HVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGL 379

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CK  R+ +   L+DE+   G     +T+N L+NGLCKN ++ +A  L+  M  +G  P+ 
Sbjct: 380 CKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDM 439

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
            TY TL+ GLC  G L  A  +   ++      N   Y  +INGL K G   +   +L  
Sbjct: 440 STYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQ 499

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           ME+     +   Y TLIS LFK  K   A+KL ++M+ +
Sbjct: 500 MEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 155/534 (29%), Positives = 258/534 (48%), Gaps = 62/534 (11%)

Query: 113 KRVVLEKSFIFIFKAYGKAHL-------------------VEEAIRLFHTMVDEFHCKRT 153
           K+ +LEK  +  +K   K  L                   ++ A  +++ MV E   + T
Sbjct: 131 KKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMV-ECGIRPT 189

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++N++L+   ++G    AL+    ++  + M  LPN +T+N+++  +   G ++ A +
Sbjct: 190 VVTYNTMLDSFCKQGKVQEALQL---LLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKE 246

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L +EM     E   YTY  L+ G C++ +LDEA  L +EM   G  PT VT+N ++ GLC
Sbjct: 247 LIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLC 306

Query: 274 KNGELGRAAKLVDNMF-----------------------------------LKGCLPNEV 298
           K G +  A KL+D M                                     +G +P+ V
Sbjct: 307 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVV 366

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TYNTLI GLC  G+LD A+ L D M+     P+  T+  ++ G  KLG       +   M
Sbjct: 367 TYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEM 426

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             R    + + Y T I G  K G    A  + ++M+ +G  P+ + Y+  IDGL ++G  
Sbjct: 427 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 486

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA E++ +M+ NG   +  TY+S++     +G   KA  ++ +M       + V Y+VL
Sbjct: 487 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVL 546

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           IH     G+L+ A + + +M  +G  P+V+ Y+++I+GLC    +++A K F EM   + 
Sbjct: 547 IHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEM---QA 603

Query: 539 KS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           K   P+ +TY IL+N  C   +   ++ L   M+DR   PD  T +  L  L +
Sbjct: 604 KGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHSALLKHLNK 657



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 149/483 (30%), Positives = 241/483 (49%), Gaps = 17/483 (3%)

Query: 188 ILPNTLTFNLVIKTVC-RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           +LP+    N V++ +  R   +D A +++  M      P + TY T++D  CK+ ++ EA
Sbjct: 150 MLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEA 209

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + LL +MQ  GC P  VT+NVL+NGL  +GEL +A +L+  M   G   +  TY+ LI G
Sbjct: 210 LQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRG 269

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C KG LD+A  L + M++   +P  VTY TI+ GL K GR  D  ++L  M  +    +
Sbjct: 270 YCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPD 329

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+TLI G  + G   +A  L+ ++  +G  P+ V Y+ LIDGLCR+G  D A  +  
Sbjct: 330 LVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKD 389

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EMI +G   + FT++ L++GF + G    A E++ +M       +   Y   I G  + G
Sbjct: 390 EMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLG 449

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
              +A  +  +ML+RG  PD++ Y+  I GL   G+++EA +L  +ML       PD  T
Sbjct: 450 DPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLY--NGLVPDHVT 507

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL----------TALKEKLEAP 596
           Y  +++A     ++  +  +   M+ +G  P +VT  + +           A+    E  
Sbjct: 508 YTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 567

Query: 597 QDGTD----FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           + G        N L   L K ++    +K    M  K +SP   T+  ++ E C     Q
Sbjct: 568 EKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQ 627

Query: 653 AAI 655
            A+
Sbjct: 628 EAL 630



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/386 (31%), Positives = 203/386 (52%), Gaps = 3/386 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P  +T+N ++  +C+ G V +A +L   M  +N  PD+ +Y TL+ G  +   + EA L
Sbjct: 292 VPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFL 351

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L  E++  G  P+ VT+N LI+GLC+ G+L  A +L D M   G  P+  T+  L+ G C
Sbjct: 352 LFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFC 411

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             GNL  A  L D M+     P+   Y T I G +KLG       +   M  R F  +  
Sbjct: 412 KLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 471

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+  I GL K G  ++A +L K+M+  G  P+ V Y+++I      G   +A  +  EM
Sbjct: 472 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEM 531

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ G   +  TY+ L+  +   G+   A+  + +M +     N + Y+ LI+GLC+  K+
Sbjct: 532 LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 591

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A   +T+M ++G  P+   Y+ +I+  CN G  +EAL+L+ +M  L+ + QPD  T++
Sbjct: 592 DQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDM--LDREIQPDSCTHS 649

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRG 574
            LL  L K    SH +  L +++  G
Sbjct: 650 ALLKHLNKDYK-SHVVRHLENVIAAG 674


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 148/460 (32%), Positives = 241/460 (52%), Gaps = 7/460 (1%)

Query: 107 YRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII 165
           + M +EK VV + ++F  +   + K +  E    L+  M      K TV +FN ++NV+ 
Sbjct: 189 FDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMF-RLKIKSTVYTFNIMINVLC 247

Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP 225
           +EG   +A +F   + N   + + PN +T+N VI   C  G V+ A  +   M  R  EP
Sbjct: 248 KEGKLKKAKDFIGSMEN---LGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEP 304

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D YTY +L+ G+CK  +L+EA  +L++M+  G  PT VT+N LI+G C  G+L +A    
Sbjct: 305 DSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYR 364

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
           D M  +  LP   TYN LIH L L+G +D+A  ++  M  S  +P+ +TY  +ING  + 
Sbjct: 365 DEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRC 424

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           G A     +   M  +        Y++LI  L K  + + A  L+++++ +G  P+ +++
Sbjct: 425 GNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMF 484

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           +ALIDG C  G  D A  +L EM       +  TY++LM+G    GK  +A E+ K+M +
Sbjct: 485 NALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKR 544

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                + + Y+ LI G  + G + +A  +  +MLS G  P ++ Y+++I GLC     + 
Sbjct: 545 RGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDL 604

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           A +L  EM  +     PD  TY  L+  + K  + S + D
Sbjct: 605 AEELLKEM--VSKGITPDDSTYFSLIEGIGKVDDSSEASD 642



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 131/425 (30%), Positives = 224/425 (52%), Gaps = 5/425 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           +++FN++L++ ++          Y  +   K   I     TFN++I  +C+ G +  A  
Sbjct: 201 IETFNAMLSLFLKLNQTETVWVLYAEMFRLK---IKSTVYTFNIMINVLCKEGKLKKAKD 257

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
               M     +P++ TY T++ G C   R++ A ++LD M+  G  P   T+  LI+G+C
Sbjct: 258 FIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMC 317

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G+L  A+ +++ M   G LP  VTYNTLI G C KG+L KA    D MV    +P   
Sbjct: 318 KGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVS 377

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+ L   G+  +   ++  M +     +   Y+ LI+G  + G A+ A  L  +M
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + KG +P  V Y++LI  L +  +   A+++  ++I  G + +   +++L+ G   +G  
Sbjct: 438 ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNL 497

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A  + K+M K N V +EV Y+ L+ G C +GK+ EAR +  +M  RG +PD ++Y+++
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTL 557

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I G    G + +A  + +EML +     P + TYN L+  LCK      + +LL  M+ +
Sbjct: 558 ISGYSKRGDINDAFTIRDEMLSI--GFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSK 615

Query: 574 GCDPD 578
           G  PD
Sbjct: 616 GITPD 620



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 222/457 (48%), Gaps = 23/457 (5%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +++ F+++I+  C L   D+A + F  M  +   P I T+  ++    K N+ +   +L 
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM       T  TFN++IN LCK G+L +A   + +M   G  PN VTYNT+IHG C +
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G ++ A  +LD M      P+  TYG++I+G+ K G+  + + +L  M+E         Y
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI G   +G    A     +M+ +   P    Y+ LI  L   GK DEA+ ++ +M +
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +G   ++ TY+ L+ G+   G   KA  +  +M         V Y+ LI+ L +  +++ 
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 464

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++ +++  G  PD++ ++++I G C  G+++ A  L  EM   +    PD  TYN L
Sbjct: 465 ADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM--DKRNIVPDEVTYNTL 522

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +   C++  +  + +LL  M  RG  PD ++ N  ++                       
Sbjct: 523 MQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYS-------------------- 562

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            KR   +  F I + ML    +P   T+  ++Q LC+
Sbjct: 563 -KRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCK 598



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 171/377 (45%), Gaps = 24/377 (6%)

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           + + ++ LI   C     D A    D M     +P   T+  +++  +KL +      + 
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M   K     Y ++ +I+ L KEGK + A      M   G KPN V Y+ +I G C  
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G+ + A  +L  M N G   +++TY SL+ G  + GK  +A  I + M +   +   V Y
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + LI G C  G L +A     +M+ R   P V  Y+ +IH L   G ++EA  +  +M  
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDM-- 402

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN--IFLTALKEKL 593
            +    PD  TYNIL+N  C+  N   + +L + M+ +G  P LVT    I++ + + ++
Sbjct: 403 GDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRM 462

Query: 594 EAPQDGTDFLNELAIR------------LFKRQRTSG----GFKIVEVMLQKFLSPQTST 637
           +A  D    L E  IR            L      +G     F +++ M ++ + P   T
Sbjct: 463 KAADD----LFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVT 518

Query: 638 WERVVQELCRPKRIQAA 654
           +  ++Q  CR  +++ A
Sbjct: 519 YNTLMQGRCREGKVEEA 535


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 231/443 (52%), Gaps = 5/443 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA R+F  M  E +C+    +++ +++ + + G    A +    +V        P+T T+
Sbjct: 224 EAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK---GCQPSTRTY 280

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
            ++IK  C +G+ D A+++  EM  + C P+++TY  L+D LC+E +++EA  +  +M  
Sbjct: 281 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 340

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P  +TFN LING CK G +  A +L+  M    C PN  TYN L+ GLC      K
Sbjct: 341 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 400

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  LL R+V +  +P+ VTY  +++G  K G+      +  SM       + + ++ LI 
Sbjct: 401 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 460

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL K G+ E A  +   M++KG   + V ++ALIDG C++GK  +   +   M+ N C  
Sbjct: 461 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 520

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
            A T++  +    +  K ++A  +   M K   V + V +++LI G C  G+   +  + 
Sbjct: 521 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 580

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M   GC P+V  Y+ +I+GLCN G VEEA  +   M        P+ FTY +L+ A  
Sbjct: 581 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSF--GVSPNHFTYAVLVKAHV 638

Query: 556 KQSNISHSIDLLNSMMDRGCDPD 578
           K   +  +  ++++M+  GC P+
Sbjct: 639 KAGRLDRAFQIVSTMVKNGCQPN 661



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 211/406 (51%), Gaps = 2/406 (0%)

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           +K  N  PN++T++++I  +C  G ++ A QL +EM  + C+P   TY  L+   C    
Sbjct: 233 SKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 292

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            D+A+ +LDEM    C P   T+ +LI+ LC+ G++  A  +   M   G  P  +T+N 
Sbjct: 293 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 352

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI+G C +G +  A  LL  M    C PN  TY  ++ GL ++ ++     +L  + +  
Sbjct: 353 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 412

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              +   Y+ L+ G  KEG+   A  ++  M   G +P+   ++ALIDGLC++G+ ++A 
Sbjct: 413 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 472

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            IL  M+  G + +  T+++L+ G  + GK      ++++M +N C+     ++  +  L
Sbjct: 473 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 532

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            +D KL EA  +  +M+  G  P VV ++ +I G C AG    +LK+   M   +    P
Sbjct: 533 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK--QAGCSP 590

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +V+TY I++N LC    +  +  +L SM   G  P+  T  + + A
Sbjct: 591 NVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 636



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 242/497 (48%), Gaps = 44/497 (8%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           +++  + KA     + ++A+++   M  +  C   V ++  +++ + +EG    A   + 
Sbjct: 278 RTYTVLIKAKCDIGMTDKAMKMLDEMATK-ACVPNVHTYTILIDRLCREGKIEEANGVFR 336

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++  KH  + P  +TFN +I   C+ G V +A QL   M   NC+P+I TY  LM+GLC
Sbjct: 337 KML--KH-GLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLC 393

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           + ++  +A LLL  +  +G  P  VT+N+L++G CK G+L  A  + ++M   G  P+  
Sbjct: 394 RVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF 453

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T+  LI GLC  G L++A  +L  MV      +EVT+  +I+G  K+G+A D   +  +M
Sbjct: 454 TFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 513

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E +     + ++  +  L K+ K  +A  +  +MM+ G  P+ V ++ LI+G CR G+ 
Sbjct: 514 VENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGET 573

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             + ++L  M   GC+ N +TY+ ++ G   +G+  +A  I   M+      N   Y+VL
Sbjct: 574 ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVL 633

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG------------LCNAG----- 521
           +    + G+L  A  + + M+  GC+P+   YS+++ G            L + G     
Sbjct: 634 VKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDAR 693

Query: 522 --------------------SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
                                V+ ALK+ +E   ++    P    YN L+  LCK+  I 
Sbjct: 694 SLSSEENDNNCLSSHVFRLMDVDHALKIRDE---IKKCGVPTEDLYNFLVVGLCKEGRII 750

Query: 562 HSIDLLNSMMDRGCDPD 578
            +  L   M+  G  PD
Sbjct: 751 EADQLTQDMVKHGLFPD 767



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 228/483 (47%), Gaps = 27/483 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A   Y  +VN      +   + +  V+  +C+ G V  A     ++       D +   +
Sbjct: 155 AFLVYRRMVNE---GFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTS 211

Query: 233 LMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           L+   C+ + L EA  + ++M + + C P  VT+++LI+GLC+ G L  A +L   M  K
Sbjct: 212 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           GC P+  TY  LI   C  G  DKA+ +LD M    C+PN  TY  +I+ L + G+  + 
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             V   M +         ++ LI+G  KEG    A +L   M +  CKPN   Y+ L++G
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LCRV K  +A  +L  +++NG   +  TY+ L+ GF + G+ + A  I+  M       +
Sbjct: 392 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              ++ LI GLC+ G+L +A  +   M+ +G   D V ++++I G C  G  ++   LF 
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 511

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            M+  E +      T+N  L+AL K   ++ +  +L  MM  G  P +VT  I +     
Sbjct: 512 NMV--ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI----- 564

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                 +G     E A+ L          K++E M Q   SP   T+  ++  LC   R+
Sbjct: 565 ------EGHCRAGETALSL----------KMLERMKQAGCSPNVYTYTIIINGLCNNGRV 608

Query: 652 QAA 654
           + A
Sbjct: 609 EEA 611



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 211/434 (48%), Gaps = 6/434 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           + +V+N + + G    A  F   ++    +    +T     ++   CR   +  A ++F 
Sbjct: 174 YRTVVNALCKNGFVQAAEMFCCKVL---RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 230

Query: 217 EMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           +M    NC P+  TY  L+ GLC+  RL+EA  L  EM   GC P+  T+ VLI   C  
Sbjct: 231 KMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 290

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G   +A K++D M  K C+PN  TY  LI  LC +G +++A  +  +M+     P  +T+
Sbjct: 291 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 350

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +ING  K G  V   ++L  ME+     N   Y+ L+ GL +  K+  A  L +++++
Sbjct: 351 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 410

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G  P+ V Y+ L+DG C+ G+ + A  I   M + G   + FT+++L+ G  + G+  +
Sbjct: 411 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 470

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A  I   M K     +EV ++ LI G C+ GK ++   ++  M+   C      ++  + 
Sbjct: 471 ANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLD 530

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            L     + EA  +  +M+  +    P V T+ IL+   C+    + S+ +L  M   GC
Sbjct: 531 ALGKDYKLNEANAMLGKMM--KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 588

Query: 576 DPDLVTCNIFLTAL 589
            P++ T  I +  L
Sbjct: 589 SPNVYTYTIIINGL 602



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 237/523 (45%), Gaps = 43/523 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI      G  +    V  +M +        +F  +   Y K   V  A +L   M
Sbjct: 314 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 373

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++ +CK  ++++N ++  + +    ++A      +V+     +LP+ +T+N+++   C+
Sbjct: 374 -EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN---GLLPDRVTYNILVDGFCK 429

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A  +F  M     EPD +T+  L+DGLCK  RL++A  +L  M   G     VT
Sbjct: 430 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 489

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           F  LI+G CK G+      L +NM    CL    T+N  +  L     L++A ++L +M+
Sbjct: 490 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 549

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+ VT+  +I G  + G      ++L  M++     N Y Y+ +I+GL   G+ E
Sbjct: 550 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 609

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A  +   M   G  PN   Y+ L+    + G+ D A +I+  M+ NGC  N+  YS+L+
Sbjct: 610 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 669

Query: 445 KGFFESGK--GHKAVEIWKDMA---------KNNCVYNEV-------------------- 473
            GF  S    G +A+    D+           NNC+ + V                    
Sbjct: 670 SGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG 729

Query: 474 -----CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
                 Y+ L+ GLC++G++ EA  +   M+  G  PD  A SS+I   C     +  L+
Sbjct: 730 VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLE 788

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
                L L+ K  P   +Y  +++ L  +  +  +  L++ ++
Sbjct: 789 FMK--LVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 829



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 38/361 (10%)

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y TL+  L K N    A L+   M  +G     + +  ++N LCKNG +  A      + 
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 198

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLGRA 348
             G   +     +L+   C + +L +A  + ++M   + C PN VTY             
Sbjct: 199 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTY------------- 245

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                                 S LI GL + G+ E+A +L ++M+EKGC+P+T  Y+ L
Sbjct: 246 ----------------------SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 283

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I   C +G  D+A ++L EM    C  N  TY+ L+      GK  +A  +++ M K+  
Sbjct: 284 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 343

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
               + ++ LI+G C++G +  A  + + M    CKP++  Y+ ++ GLC      +A  
Sbjct: 344 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 403

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L   ++  +    PD  TYNIL++  CK+  ++ + ++ NSM   G +PD  T    +  
Sbjct: 404 LLRRVV--DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 461

Query: 589 L 589
           L
Sbjct: 462 L 462



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 135/326 (41%), Gaps = 58/326 (17%)

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           NG+VKL  A+DG      M E  F ++   YSTL+  L K      A  ++++M+ +G  
Sbjct: 115 NGVVKLMGALDG------MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFV 168

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
              + Y  +++ LC+ G    AE               F    L  GF            
Sbjct: 169 LGGIDYRTVVNALCKNGFVQAAE--------------MFCCKVLRLGFG----------- 203

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML-SRGCKPDVVAYSSMIHGLC 518
                    +   VC S+++   C    L EA  V+ +M     C+P+ V YS +IHGLC
Sbjct: 204 ---------LDTHVCTSLVLAN-CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLC 253

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
            AG +EEA +L  EM  +E   QP   TY +L+ A C       ++ +L+ M  + C P+
Sbjct: 254 EAGRLEEAFQLKQEM--VEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPN 311

Query: 579 LVTCNIFLTAL--KEKLEAPQD------------GTDFLNELAIRLFKRQRTSGGFKIVE 624
           + T  I +  L  + K+E                G    N L     K       F+++ 
Sbjct: 312 VHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS 371

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKR 650
           VM +    P   T+  +++ LCR  +
Sbjct: 372 VMEKGNCKPNIRTYNELMEGLCRVSK 397



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 144/375 (38%), Gaps = 72/375 (19%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           ++ I  S  K G   L + TF +LI  +   G  K +  +   M   + +    +F    
Sbjct: 471 ANGILGSMVKKG-ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 529

Query: 126 KAYGKAHLVEEAIRLF--------------HTMVDEFHC---------------KRTVKS 156
            A GK + + EA  +               HT++ E HC               K+   S
Sbjct: 530 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 589

Query: 157 FNSVLNVIIQEGLYH--RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
            N     II  GL +  R  E    + +     + PN  T+ +++K   + G +D A Q+
Sbjct: 590 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQI 649

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENR-------------------------------- 242
              M    C+P+ + Y  L+ G    N                                 
Sbjct: 650 VSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHV 709

Query: 243 -----LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
                +D A+ + DE++  G  PT   +N L+ GLCK G +  A +L  +M   G  P++
Sbjct: 710 FRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK 768

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
              +++I   C     D  +  +  ++ +K +P+  +Y  +I+GL   GR V  A+ L+S
Sbjct: 769 AI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGR-VQEAQKLVS 826

Query: 358 MEERKFHVNEYIYST 372
              R   + E +  T
Sbjct: 827 DLVRHTGIEEEVEVT 841



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 20/268 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I    N+G  +  E +L+ M          ++  + KA+ KA  ++ A ++  TM
Sbjct: 594 TYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 653

Query: 145 VDEFHCKRTVKSFNSVLN--VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           V    C+     ++++L+  V+    +  RAL     + +A+ ++   N    N +   V
Sbjct: 654 VKN-GCQPNSHIYSALLSGFVLSNTAIGARALSSTGDL-DARSLSSEEND--NNCLSSHV 709

Query: 203 CRLGLVDNAIQLFREMPVRNC---EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
            RL  VD+A+++  E  ++ C     D+Y +  L+ GLCKE R+ EA  L  +M   G F
Sbjct: 710 FRLMDVDHALKIRDE--IKKCGVPTEDLYNF--LVVGLCKEGRIIEADQLTQDMVKHGLF 765

Query: 260 PTPVTFNVLIN--GLCKNGELGRAAKLV-DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           P     +++ +    CK        KLV DN F+    P+  +Y  +IHGL  +G + +A
Sbjct: 766 PDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFV----PSFASYCWVIHGLRNEGRVQEA 821

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVK 344
             L+  +V    +  EV     I  L+K
Sbjct: 822 QKLVSDLVRHTGIEEEVEVTPSIEFLMK 849


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/430 (31%), Positives = 232/430 (53%), Gaps = 3/430 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PNT+T N ++K +C  G V  ++    ++  +  + D  +Y TL++GLCK      A+ L
Sbjct: 78  PNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKL 137

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  ++     P  V +N +I+GLCK+  +  A  L   M  +G  PN +TY+TLI+G CL
Sbjct: 138 LRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCL 197

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L +A  LL+ M+     PN  TY  +++ L K G+  +   +L  M +     N   
Sbjct: 198 AGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVS 257

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TL+ G    G+ ++A +++  M++KG  PN   Y+ +ID LC+  + DEA  +L E++
Sbjct: 258 YNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVL 317

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +     N  TYSSL+ GF + G+   A+++ K+M       + V Y+ L+  LC++  L 
Sbjct: 318 HKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLD 377

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  ++ +M  RG +P+   Y+++I GLC  G  + A KLF  +L      + +V+TYN+
Sbjct: 378 KATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLV--KGCRINVWTYNV 435

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +++ LCK+  +  ++ + + M + GC PD VT  I + +L EK +        L+E+  +
Sbjct: 436 MISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEK-DQNDKAEKLLHEMIAK 494

Query: 610 LFKRQRTSGG 619
              R R   G
Sbjct: 495 DLLRFRDFHG 504



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/418 (30%), Positives = 237/418 (56%), Gaps = 5/418 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           + N+++  +  +G   ++L F++ +V A+   +  + +++  ++  +C++G   +A++L 
Sbjct: 82  TLNTLMKGLCLKGEVKKSLHFHDKVV-AQGFQM--DQVSYATLLNGLCKIGETRSALKLL 138

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R +  R+  P++  Y T++DGLCK+  ++EA  L  EM   G FP  +T++ LI G C  
Sbjct: 139 RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLA 198

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A  L++ M LK   PN  TY  L+  LC +G + +A +LL  M      PN V+Y
Sbjct: 199 GQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSY 258

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G   +G   +  ++  +M ++  + N Y Y+ +I  L K  + ++AM L ++++ 
Sbjct: 259 NTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLH 318

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   PNTV YS+LIDG C++G+   A ++L EM + G  A+  TY+SL+    ++    K
Sbjct: 319 KNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDK 378

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A  ++  M +     N+  Y+ LI GLC+ G+ + A+ ++  +L +GC+ +V  Y+ MI 
Sbjct: 379 ATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMIS 438

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           GLC  G ++EAL + ++M   E    PD  T+ I++ +L ++     +  LL+ M+ +
Sbjct: 439 GLCKEGMLDEALAMKSKM--EENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK 494



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/494 (28%), Positives = 251/494 (50%), Gaps = 23/494 (4%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           +  FN ++  +++   Y  A+  +  +   +   I P+  T N++I   C LG +  +  
Sbjct: 10  IMEFNKIVGSLVKMKHYPTAISLFKQM---QVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  ++     +P+  T  TLM GLC +  + +++   D++   G     V++  L+NGLC
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K GE   A KL+  +  +   PN V YNT+I GLC    +++A  L   M A    PN +
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T+I G    G+ ++   +L  M  +  + N Y Y+ L+  L KEGK ++A  L   M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            ++G KPN V Y+ L+DG C +G+   A+++   M+  G   N ++Y+ ++    +S + 
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ + +++   N V N V YS LI G C+ G++  A  +  +M  RG   DVV Y+S+
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSL 366

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           +  LC   ++++A  LF +M   E   QP+ +TY  L++ LCK     ++  L   ++ +
Sbjct: 367 LDALCKNQNLDKATALFMKM--KERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVK 424

Query: 574 GCDPDLVTCNIFLT------------ALKEKLEAP---QDGTDFLNELAIR-LFKRQRTS 617
           GC  ++ T N+ ++            A+K K+E      D   F  E+ IR LF++ +  
Sbjct: 425 GCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTF--EIIIRSLFEKDQND 482

Query: 618 GGFKIVEVMLQKFL 631
              K++  M+ K L
Sbjct: 483 KAEKLLHEMIAKDL 496



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/430 (31%), Positives = 214/430 (49%), Gaps = 23/430 (5%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P I  +  ++  L K      A+ L  +MQV G  P   T N+LIN  C  G++  +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           +  +   G  PN +T NTL+ GLCLKG + K++   D++VA     ++V+Y T++NGL K
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           +G      ++L  +E+R    N  +Y+T+I GL K+    +A  L+ +M  +G  PN + 
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           YS LI G C  G+  EA  +L EMI      N +TY+ LM    + GK  +A  +   M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           K     N V Y+ L+ G C  G+++ A+ ++  M+ +G  P+V +Y+ MI  LC +  V+
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA+ L  E+  L     P+  TY+ L++  CK   I+ ++DLL  M  RG   D+VT   
Sbjct: 308 EAMNLLREV--LHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTS 365

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            L AL +     +         A  LF + +  G            + P   T+  ++  
Sbjct: 366 LLDALCKNQNLDK---------ATALFMKMKERG------------IQPNKYTYTALIDG 404

Query: 645 LCRPKRIQAA 654
           LC+  R + A
Sbjct: 405 LCKGGRHKNA 414



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/402 (32%), Positives = 207/402 (51%), Gaps = 6/402 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  + FN ++ ++ ++     AI LF++M V+  EPD++T   L++  C   ++  +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L ++   G  P  +T N L+ GLC  GE+ ++    D +  +G   ++V+Y TL++GLC 
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEY 368
            G    A+ LL  +      PN V Y TII+GL K  + V+ A  L S M+ R    N  
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCK-DKLVNEAYDLYSEMDARGIFPNVI 186

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YSTLI G    G+  +A  L  +M+ K   PN   Y+ L+D LC+ GK  EA+ +L  M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G   N  +Y++LM G+   G+   A +++  M +     N   Y+++I  LC+  ++
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRV 306

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP-DVFTY 547
            EA  +  ++L +   P+ V YSS+I G C  G +  AL L  EM     + QP DV TY
Sbjct: 307 DEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMY---HRGQPADVVTY 363

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             LL+ALCK  N+  +  L   M +RG  P+  T    +  L
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 245/474 (51%), Gaps = 10/474 (2%)

Query: 61  SEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS 120
            +  FS  +     KLG YQ    T  +L++     G+ K       ++  +   + + S
Sbjct: 59  GQMTFSFTVLGKILKLG-YQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVS 117

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +     K      A++L   M+++   +  V  +N++++ + ++ L + A + Y+ +
Sbjct: 118 YATLLNGLCKIGETRSALKLLR-MIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM 176

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
            +A+   I PN +T++ +I   C  G +  A  L  EM ++N  P++YTY  LMD LCKE
Sbjct: 177 -DAR--GIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKE 233

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            ++ EA  LL  M  +G  P  V++N L++G C  GE+  A ++   M  KG  PN  +Y
Sbjct: 234 GKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSY 293

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N +I  LC    +D+A++LL  ++    +PN VTY ++I+G  KLGR      +L  M  
Sbjct: 294 NIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYH 353

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R    +   Y++L+  L K    + A  L+ +M E+G +PN   Y+ALIDGLC+ G+   
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKN 413

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A+++   ++  GC  N +TY+ ++ G  + G   +A+ +   M +N C+ + V + ++I 
Sbjct: 414 AQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIR 473

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
            L E  +  +A  +  +M+++    D++ +    HG  +    ++A KL +EM+
Sbjct: 474 SLFEKDQNDKAEKLLHEMIAK----DLLRFRD-FHGERSPNENDKAEKLLHEMI 522


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 129/396 (32%), Positives = 219/396 (55%), Gaps = 2/396 (0%)

Query: 191  NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
            +  T+ ++I  +C+ G+   A+ +F EM      PD+  Y +LMDGLC+  RL EA+   
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143

Query: 251  DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             EM+  G      T+N LI+GL + G        ++ M  +G  P+  T+  LI GLC +
Sbjct: 1144 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 1203

Query: 311  GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
            G + +A  +L+ M      P+ +TY T++NGL  +G+  D  ++  S+ +R   +N + Y
Sbjct: 1204 GKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 1263

Query: 371  STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
            + LI+G  K+ K ++A + +++M  KG KP+TV Y+ LI  LC+ G+   A+++  EM  
Sbjct: 1264 NILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQT 1323

Query: 431  NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
             G      TY  L+ G  ++G   +A+++++ + K     N   +S+L+ G+C  GKL E
Sbjct: 1324 CGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEE 1383

Query: 491  ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
            A   + ++   G +PD +AY+ +I+GLCN G + EA+KL  +M   E    PD  T+N++
Sbjct: 1384 AWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQM--EEKGCLPDSITFNVI 1441

Query: 551  LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            +  L K++ I  +I LL  M +R   PD    ++ L
Sbjct: 1442 IQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 164/541 (30%), Positives = 262/541 (48%), Gaps = 29/541 (5%)

Query: 134  VEEAIRLFHTMVDEFHCKRTV---KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
            + +AI+LF    D   C   +    +FN +L  + + G Y      Y  I +   + I P
Sbjct: 927  LNDAIKLF----DRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKIND---VGIQP 979

Query: 191  NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
            +  T N++I   C L  V     +F     R  EPD  T  TL+ G+  EN + +AV L 
Sbjct: 980  DLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLF 1039

Query: 251  DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGLCL 309
            DEM   G      T+ +LINGLCK  + G A KL + M  KG C  +  TY  +I  LC 
Sbjct: 1040 DEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM--KGNCKGDVFTYGMIIDALCK 1097

Query: 310  KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             G   +A+ +   M+ +  +P+ V Y ++++GL + GR  +       ME R    + Y 
Sbjct: 1098 DGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYT 1157

Query: 370  YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            Y++LI GL + G  ++       M+++G  P+   ++ LIDGLC+ GK  EA++IL  M 
Sbjct: 1158 YNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMR 1217

Query: 430  NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            + G   +  TY++LM G    G+   A ++++ +A      N   Y++LI+G C+D K+ 
Sbjct: 1218 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 1277

Query: 490  EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            EA   + +M  +G KP  V Y+++I  LC +G V  A KLF EM       +  + TY +
Sbjct: 1278 EAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLK--LSTYCV 1335

Query: 550  LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT----------ALKEKLEAPQDG 599
            LL+ LCK  ++  ++DL  S+      P++   +I L           A K+  E  ++G
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395

Query: 600  ----TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                T   N L   L  +   S   K++  M +K   P + T+  ++Q L +   I  AI
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAI 1455

Query: 656  N 656
             
Sbjct: 1456 Q 1456



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 185/409 (45%), Gaps = 25/409 (6%)

Query: 265  FNVLINGLCKNG--ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            F   +   C+ G  +L  A KL D       +P   T+N L+  +   G       +  +
Sbjct: 912  FERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRK 971

Query: 323  MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
            +      P+  T   +I+    L     G  V     +R F  +    +TL+ G++ E  
Sbjct: 972  INDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENG 1031

Query: 383  AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              DA++L+ +M +KG   +   Y  LI+GLC+  K   A + L E +   C  + FTY  
Sbjct: 1032 IPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIK-LHEKMKGNCKGDVFTYGM 1090

Query: 443  LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
            ++    + G   +A++++ +M     + + V YS L+ GLC  G+L+EA   + +M  RG
Sbjct: 1091 IIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRG 1150

Query: 503  CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
               DV  Y+S+IHGL  AG  +E     N  L ++    PD FT+ IL++ LCK+  +  
Sbjct: 1151 ISADVYTYNSLIHGLSRAGLWKEVTWFLN--LMVDRGFSPDAFTFTILIDGLCKEGKVGE 1208

Query: 563  SIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIRLF--------- 611
            +  +L  M  +G +PD++T N  +    L  +LE   D T     LA R           
Sbjct: 1209 AQQILELMRHKGKEPDILTYNTLMNGLCLVGQLE---DATKLFESLADRGIKLNVFSYNI 1265

Query: 612  ------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  K Q+    F+  E M  K L P T T+  ++  LC+  R++ A
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTA 1314


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 146/437 (33%), Positives = 237/437 (54%), Gaps = 26/437 (5%)

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEF-YNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           ++  K ++ S N +L+ +++E   +  +EF Y  ++  K   I  N ++FN+V+  +C++
Sbjct: 113 DYGFKLSLISCNPLLSGLVKES-ENGDMEFVYREMIKRK---IELNVISFNIVVNGLCKV 168

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE---AVLLLDEMQVDGCFPTP 262
           G ++ A  +  +M V    P++ TY TL+DG CK  R+ +   A  +L EM   G  P  
Sbjct: 169 GKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNE 228

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N+LI+G CK+  +  A ++   M  +G  PN VTYN LI+GLC  G +D+AV+L D+
Sbjct: 229 VTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQ 288

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MV+S   PN VT+  +ING  K     +   +   ME++    N   Y+TLI    K+G+
Sbjct: 289 MVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGR 348

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            EDA  L+  M+++G  P    Y+ LI GLCR G    A  ++ EM++   +A+  TY+ 
Sbjct: 349 MEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNI 408

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+    + G+  KAV++  +M +     + V Y+ L+ G C +G LR A +V T+M  +G
Sbjct: 409 LIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKG 468

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            + +VV ++ +I G C  G +E+A  L NEM  LE    P+  TY I             
Sbjct: 469 KQANVVTHNVLIKGFCLKGRLEDANGLLNEM--LERGLVPNRTTYEI------------- 513

Query: 563 SIDLLNSMMDRGCDPDL 579
              +   MM++G  PD+
Sbjct: 514 ---IKEEMMEKGFVPDI 527



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/388 (31%), Positives = 198/388 (51%), Gaps = 7/388 (1%)

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           ++REM  R  E ++ ++  +++GLCK  +L+ A  ++++M+V G  P  +T+N LI+G C
Sbjct: 142 VYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYC 201

Query: 274 KNGELGR---AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           K G +G+   A  ++  M  KG  PNEVTYN LI G C   N+  A+ +   M      P
Sbjct: 202 KMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRP 261

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N VTY  +INGL   G+  +   +   M       N   ++ LI+G  K     +A+ L+
Sbjct: 262 NVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLF 321

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M ++G  PN + Y+ LID  C+ G+ ++A  +   MI+ G      TY+ L+ G    
Sbjct: 322 NDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRK 381

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G    A  +  +M       + V Y++LI  LC+ G+ R+A  +  +M  +G  P  V Y
Sbjct: 382 GDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTY 441

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNS 569
           ++++ G C  G++  AL +   M   E K  Q +V T+N+L+   C +  +  +  LLN 
Sbjct: 442 NTLMDGYCREGNLRAALIVRTRM---ERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNE 498

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
           M++RG  P+  T  I    + EK   P 
Sbjct: 499 MLERGLVPNRTTYEIIKEEMMEKGFVPD 526



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 208/400 (52%), Gaps = 19/400 (4%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           ++ N L++GL K  E G    +   M  +    N +++N +++GLC  G L++A  +++ 
Sbjct: 121 ISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIED 180

Query: 323 MVASKCMPNEVTYGTIINGLVKLGR---AVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           M      PN +TY T+I+G  K+GR         +L  M  +    NE  Y+ LI G  K
Sbjct: 181 MKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCK 240

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           +     AM+++ +M  +G +PN V Y+ LI+GLC  GK DEA  +  +M+++    N  T
Sbjct: 241 DENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVT 300

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           ++ L+ GF ++   ++A+ ++ DM K     N + Y+ LI   C+DG++ +A  ++  M+
Sbjct: 301 HNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMI 360

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            RG  P+V  Y+ +I GLC  G V+ A  L NEM+    K   DV TYNIL+++LCK+  
Sbjct: 361 DRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMV--SKKLSADVVTYNILIDSLCKKGE 418

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDFL--NE 605
              ++ LL+ M ++G +P  VT N  +              ++ ++E      + +  N 
Sbjct: 419 SRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNV 478

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
           L      + R      ++  ML++ L P  +T+E + +E+
Sbjct: 479 LIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEM 518



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 173/336 (51%), Gaps = 21/336 (6%)

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +++GLVK     D   V   M +RK  +N   ++ +++GL K GK   A  + + M   G
Sbjct: 126 LLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWG 185

Query: 398 CKPNTVVYSALIDGLC---RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
             PN + Y+ LIDG C   R+GK  +A+ IL EM+  G   N  TY+ L+ GF +     
Sbjct: 186 VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVS 245

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A+ ++ +M +     N V Y++LI+GLC DGK+ EA  +  QM+S   +P+VV ++ +I
Sbjct: 246 GAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLI 305

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +G C   +V EA+ LFN+M   +    P+  TY  L++A CK   +  +  L N M+DRG
Sbjct: 306 NGFCKNKTVNEAINLFNDME--KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGG 619
             P++ T N  +  L  K +  +     +NE+  +               L K+  +   
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDV-KAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKA 422

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            K+++ M +K L+P   T+  ++   CR   ++AA+
Sbjct: 423 VKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 103/231 (44%), Gaps = 39/231 (16%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  AY K   +E+A  L++ M+D                                 
Sbjct: 335 TYTTLIDAYCKDGRMEDAFALYNMMIDR-------------------------------- 362

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
                   I P   T+N +I  +CR G V  A  L  EM  +    D+ TY  L+D LCK
Sbjct: 363 -------GIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCK 415

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +    +AV LLDEM   G  P+ VT+N L++G C+ G L  A  +   M  KG   N VT
Sbjct: 416 KGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVT 475

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +N LI G CLKG L+ A  LL+ M+    +PN  TY  I   +++ G   D
Sbjct: 476 HNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFVPD 526



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 26/217 (11%)

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G  +  +      ++++M K     N + ++++++GLC+ GKL  A  V   M   G
Sbjct: 126 LLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWG 185

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALK---LFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             P+V+ Y+++I G C  G + +  K   +  EM+       P+  TYNIL++  CK  N
Sbjct: 186 VSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVA--KGICPNEVTYNILIDGFCKDEN 243

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +S ++ +   M  +G  P++VT NI +  L        DG               +    
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGL------CSDG---------------KVDEA 282

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             + + M+   L P   T   ++   C+ K +  AIN
Sbjct: 283 VALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAIN 319


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 261/513 (50%), Gaps = 31/513 (6%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FN ++NV+  EG   +A      +  + +   +P+ +T+N V+   C+ G    A++
Sbjct: 168 VSTFNILINVLCVEGKLKKAGYLLKKMEESGY---VPSVVTYNTVLNWYCKKGRYKAALE 224

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L  +M  +  E D  TY  L+D LCK NR  +  LLL +M+     P  +T+N +ING  
Sbjct: 225 LIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFV 284

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G++G A ++   M +   LPN VTYN LI G C  GN ++A+++L+ M A+   PNEV
Sbjct: 285 KEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEV 344

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           +Y  ++NGL +  +      +L  M      V    Y+ +I GL + G   +++KL  +M
Sbjct: 345 SYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKM 404

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           ++ G  P+ V +S LI+G CRVGK    +EI+ +M   G A N+  Y++L+  + ++G  
Sbjct: 405 LKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDV 464

Query: 454 HKAVEIWKDMAKNNCVYNEVCY--SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
            +A +++  M++    Y+  C+  +VL+  LC+DGK+  A   +  M   G  P+ + + 
Sbjct: 465 VEAFKVYVAMSRIG--YDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFD 522

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +I+G  N+G+  +A  +F+EM  ++    P  FTY  LL ALC+      +  LL+ + 
Sbjct: 523 CIINGYGNSGNGLKAFSMFDEM--IKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLH 580

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
                 D VT N  L                     +  FK    +    + + M+Q+ +
Sbjct: 581 YIPSAVDTVTYNTIL---------------------VETFKSGMLTDAVALFDEMVQRNV 619

Query: 632 SPQTSTWERVVQELCRPKRIQAAINKCWSNLYG 664
            P + T+  +   L R  ++ AA++  + NL G
Sbjct: 620 LPDSYTYAIIFAGLIRRGKMVAALH-FYGNLLG 651



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 220/443 (49%), Gaps = 19/443 (4%)

Query: 162 NVIIQEGLYHRALEFYNHI---------VNAKHMNILP----NTLTFNLVIKTVCRLGLV 208
           +++++  LY  A     H+         V    MN  P    N   F+L+I+   R G+V
Sbjct: 55  HILVRARLYENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFDLLIRVYLREGMV 114

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
            +A++ FR M +R   P +YT   L+  L KE ++    L   EM      P   TFN+L
Sbjct: 115 GDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARRVCPDVSTFNIL 174

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           IN LC  G+L +A  L+  M   G +P+ VTYNT+++  C KG    A+ L+D+M +   
Sbjct: 175 INVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAALELIDQMGSKGI 234

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             +  TY  +++ L K  R+  G  +L  M +R    NE  Y+++I+G  KEGK   A +
Sbjct: 235 EADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGKIGAATR 294

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           ++++M      PN V Y+ALIDG C  G  ++A  IL  M   G   N  +YS+L+ G  
Sbjct: 295 IFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLC 354

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
              K   +  I + M  N  +   + Y+ +I GLC +G L E+  +  +ML  G  PDVV
Sbjct: 355 RHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVV 414

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILLNALCKQSNISHSIDL 566
            +S +I+G C  G ++       E++C   K+   P+   Y  L+   CK  ++  +  +
Sbjct: 415 TFSVLINGFCRVGKIKNV----KEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKV 470

Query: 567 LNSMMDRGCDPDLVTCNIFLTAL 589
             +M   G D +   CN+ +++L
Sbjct: 471 YVAMSRIGYDANCFICNVLVSSL 493



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 123/515 (23%), Positives = 240/515 (46%), Gaps = 21/515 (4%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++ ++++ + + GL + +++  + ++      ++P+ +TF+++I   CR+G + N  ++ 
Sbjct: 380 AYTAMIDGLCRNGLLNESVKLLDKMLKD---GVVPDVVTFSVLINGFCRVGKIKNVKEII 436

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M      P+   Y TL+   CK   + EA  +   M   G        NVL++ LCK+
Sbjct: 437 CKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKD 496

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G++G A     +M   G +PN +T++ +I+G    GN  KA S+ D M+ +   P+  TY
Sbjct: 497 GKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTY 556

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
           G ++  L + G+  +  R+L  +      V+   Y+T++   FK G   DA+ L+ +M++
Sbjct: 557 GGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQ 616

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA-NAFTYSSLMKGFFESGKGH 454
           +   P++  Y+ +  GL R GK   A      ++  G  +     Y++ + G F +G+  
Sbjct: 617 RNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSK 676

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSM 513
            A+   +DM KN    + +  +V+++G    GK+ +A  ++T M S     P +  Y+ +
Sbjct: 677 AALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNIL 736

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           +HG     ++ +   L+N M  +     PD  T + L+   CK + +   + LL  M+  
Sbjct: 737 LHGYAKKKNLSKCSNLYNIM--MRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLD 794

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQ--DGTDFLN-----------ELAIRLFKRQRT-SGG 619
           G   D  T N+ +    E  E  +  D  + +N           +  I +  R  T    
Sbjct: 795 GVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQES 854

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             ++  ML++   P    +  +V  +CR   I  A
Sbjct: 855 HLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGA 889



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 137/562 (24%), Positives = 258/562 (45%), Gaps = 17/562 (3%)

Query: 66   SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGD-FKSLEMVLYRMRREKRVVLEKSFIFI 124
            ++  F+   K+G+      TF  +I  Y NSG+  K+  M    M +        ++  +
Sbjct: 502  AEYFFHHMSKIGNVP-NSITFDCIINGYGNSGNGLKAFSM-FDEMIKAGHHPSHFTYGGL 559

Query: 125  FKAYGKAHLVEEAIRLFHTMVDEFH---CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
             KA  +A   +EA RL    +D+ H         ++N++L    + G+   A+  ++ +V
Sbjct: 560  LKALCRAGKFKEAKRL----LDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMV 615

Query: 182  NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKE 240
                 N+LP++ T+ ++   + R G +  A+  +  +  +    P+   Y T +DGL + 
Sbjct: 616  ---QRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRA 672

Query: 241  NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVT 299
             +   A+   ++M+ +G     +  NV++NG  + G++ +A  +   M+    + P+  T
Sbjct: 673  GQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLAT 732

Query: 300  YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
            YN L+HG   K NL K  +L + M+ +   P+++T  ++I G  K      G ++L  M 
Sbjct: 733  YNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKML 792

Query: 360  ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 V++  ++ LI    +  +   A  L   M      P+   + ++I  L RV    
Sbjct: 793  LDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQ 852

Query: 420  EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            E+  +L EM+  GC  +   Y +L+      G  H A ++  +M        +V  S L+
Sbjct: 853  ESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALV 912

Query: 480  HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
             GL + GK+ EA++V   ML +   P +  +++++H  C   S+ EALKL + M   + K
Sbjct: 913  RGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVK 972

Query: 540  SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
               DV  YN+L++ LC   +++ ++ L   +  RG  P++ T  I + A+     +   G
Sbjct: 973  --LDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFTNDISLAKG 1030

Query: 600  TDFLNELAIRLFKRQRTSGGFK 621
               L +L  R        GG +
Sbjct: 1031 EVLLKDLQERGVISGHWCGGIR 1052


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 145/472 (30%), Positives = 245/472 (51%), Gaps = 9/472 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I K+  K    EE+ ++   M+    C   V +FN V+    +     +A E Y H
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAA-GCNPDVFAFNGVMQGFARSNNMEKAREVYQH 70

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V + +    P+ ++++++I  + ++G +D ++++  EM +R   P +  Y +L+  L K
Sbjct: 71  MVESGYK---PDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAK 127

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R+D A  L DEM   G  P  + F  LI GLC+ G++  A++    M   GC PN   
Sbjct: 128 ARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPV 187

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN L+HGLC  G L++A +L   M +  C P+ VTY T+++ + K  R  +G ++  +M 
Sbjct: 188 YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMR 247

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
              +  N   +STLI GL + G+ E A++++  M+E GCKPN   Y+ LI GLCR  K  
Sbjct: 248 AAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVI 307

Query: 420 EAEEILFEMINNGC-AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE-VCYSV 477
           +A E LFE +   C   +A  Y+SL+ G+ + G   +A +++++M+    +    V ++ 
Sbjct: 308 QARE-LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNT 366

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI G C+ GKL  A  +  +M ++G   D   Y  +I GL  A  ++EAL+++ +M   E
Sbjct: 367 LIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQM--RE 424

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            K   D  +    +  LCK  NI  +  +  +    G  P+  T  I   +L
Sbjct: 425 KKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESL 476



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 233/461 (50%), Gaps = 11/461 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            F  ++Q +A S + +    V   M          S+  +     K   ++E++++   M
Sbjct: 47  AFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEM 106

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V       ++++++S++  + +      A   ++ ++   H    P+ L F  +I  +C+
Sbjct: 107 VMRGQTP-SMQAYSSLVRALAKARRVDHASSLFDEMIRGGHH---PDRLMFYELILGLCQ 162

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V +A + F++MP   C+P++  Y  L+ GLC   +L++A  L  EM+   C P  VT
Sbjct: 163 AGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVT 222

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++ +CK   +    KL + M   G +PN +T++TLIHGLC  G L+KA+ +   M+
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSML 282

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C PN+ TY T+I+GL +  + +    +   M +     +   Y++LI+G  K G  +
Sbjct: 283 EAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMD 342

Query: 385 DAMKLWKQMME-KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +A KL+++M    G +P  V ++ LIDG C++GK   A E++ EM   G AA++ TY  L
Sbjct: 343 EAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRIL 402

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G   + K  +A+E++K M +   + + V     + GLC+ G + +A  V+      G 
Sbjct: 403 IAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGA 462

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            P+   +  +   L   G VE+A KL      +EP    D+
Sbjct: 463 VPNPETFRILSESLIKLGRVEDAQKL------MEPAKARDI 497



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 209/403 (51%), Gaps = 1/403 (0%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           NI  N  T++ +IK++ +    + + ++  EM    C PD++ +  +M G  + N +++A
Sbjct: 5   NIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKA 64

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             +   M   G  P  V++++LI+GL K G+L  + K++  M ++G  P+   Y++L+  
Sbjct: 65  REVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRA 124

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           L     +D A SL D M+     P+ + +  +I GL + G+  D +     M +     N
Sbjct: 125 LAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPN 184

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             +Y+ L+ GL   G+ E A  L+ +M    C P+ V Y+ L+D +C+  + +E  ++  
Sbjct: 185 VPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFE 244

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            M   G   N  T+S+L+ G   +G+  KA+E++  M +  C  N+  Y+ LI GLC   
Sbjct: 245 AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAE 304

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ +AR ++ +M      PD VAY+S+I G C  GS++EA KL+ EM       QP + T
Sbjct: 305 KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM-SGGAGLQPTIVT 363

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +N L++  CK   +  + +L+  M  +G   D  T  I +  L
Sbjct: 364 FNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGL 406



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 199/369 (53%), Gaps = 7/369 (1%)

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +N   +++TY +++  L KE + +E+  +L+EM   GC P    FN ++ G  ++  + +
Sbjct: 4   KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 63

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A ++  +M   G  P+ V+Y+ LIHGL   G LD+++ +L  MV     P+   Y +++ 
Sbjct: 64  AREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVR 123

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
            L K  R    + +   M     H +  ++  LI GL + GK +DA + +KQM + GC+P
Sbjct: 124 ALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQP 183

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           N  VY+ L+ GLC  G+ ++A  +  EM ++ C+ +  TY++L+    ++ +  +  +++
Sbjct: 184 NVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF 243

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           + M     V N + +S LIHGLC  G+L +A  V+  ML  GCKP+   Y+++I GLC A
Sbjct: 244 EAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRA 303

Query: 521 GSVEEALKLFNEM--LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM-DRGCDP 577
             V +A +LF +M   C+     PD   YN L+   CK+ ++  +  L   M    G  P
Sbjct: 304 EKVIQARELFEKMTQACI----PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359

Query: 578 DLVTCNIFL 586
            +VT N  +
Sbjct: 360 TIVTFNTLI 368



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 134/300 (44%), Gaps = 62/300 (20%)

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M +K    N   YS++I  L +  KP+E+ ++L EM+  GC  + F ++ +M+GF  S  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             KA E+++ M ++    + V Y +LIHGL + GKL E+  + ++M+ RG  P + AYSS
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 513 MIH-----------------------------------GLCNAGSVEEALKLFNEMLCLE 537
           ++                                    GLC AG V++A + F +M    
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQM---- 176

Query: 538 PKS--QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
           PK   QP+V  YN+LL+ LC    +  +  L   M    C PD+VT N  L A       
Sbjct: 177 PKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDA------- 229

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                         + K +R   G K+ E M      P   T+  ++  LCR   ++ A+
Sbjct: 230 --------------VCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKAL 275



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/328 (30%), Positives = 152/328 (46%), Gaps = 8/328 (2%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           + E F   PK G  Q     +  L+    +SG  +    +   M+         ++  + 
Sbjct: 169 ASERFKQMPKHGC-QPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
            A  KA  VEE  +LF  M    +    + +F+++++ + + G   +ALE +  ++ A  
Sbjct: 228 DAVCKARRVEEGCKLFEAMRAAGYVPNVI-TFSTLIHGLCRTGELEKALEVFGSMLEA-- 284

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
               PN  T+  +I  +CR   V  A +LF +M      PD   Y +L+ G CK   +DE
Sbjct: 285 -GCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 343

Query: 246 AVLLLDEMQVD-GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           A  L  EM    G  PT VTFN LI+G CK G+LGRA +LV  M  KG   +  TY  LI
Sbjct: 344 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILI 403

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GL     LD+A+ +  +M   K + + V+  + + GL K G  +D A  +     +   
Sbjct: 404 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGN-IDQAYAVFEATRKSGA 462

Query: 365 V-NEYIYSTLISGLFKEGKAEDAMKLWK 391
           V N   +  L   L K G+ EDA KL +
Sbjct: 463 VPNPETFRILSESLIKLGRVEDAQKLME 490


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 142/436 (32%), Positives = 231/436 (52%), Gaps = 6/436 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV +F +++N +  EG   RA  F + + +  H +   N+ T+  +I  +C+ G    AI
Sbjct: 140 TVVTFATLINGLCAEGNVARAARFADSLEDMGHQS---NSYTYGAIINGLCKAGDTSGAI 196

Query: 213 QLFREMPVRNCEPDIY-TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
               ++  RNC+ D+   Y T+MD LCK+  + EA+ L   M   G  P  V +N LI+G
Sbjct: 197 LYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHG 256

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LC  G    A  L+ NM  KG +PN  T+N L+   C  G + +A +++  MV     P+
Sbjct: 257 LCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPD 316

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY ++I+G   L +  D  +V   M  + F  N   YS+LI G  K      A+ L  
Sbjct: 317 VVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLG 376

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M+  G  P+ V +S LI G C+ GKP+ A+E+   M  +    N  T + ++ G F+  
Sbjct: 377 EMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQ 436

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              +A+ ++++M K N   N V Y++++ G+C  GKL +A+ +++ + S+G K DVVAY+
Sbjct: 437 FHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYT 496

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +MI GLC  G +++A  L  +M   E    P+ FTYN+ +  L ++ +IS S   L  M 
Sbjct: 497 TMIKGLCKEGLLDDAENLLMKM--EENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMK 554

Query: 572 DRGCDPDLVTCNIFLT 587
            +G   D  T  + ++
Sbjct: 555 GKGLSADATTTELLIS 570



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 204/418 (48%), Gaps = 6/418 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL F++ +V    MN LP    F  +   + ++      I L + +     +PD+YT   
Sbjct: 55  ALSFFHKMVV---MNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTI 111

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++ LC  N       +L  M   G  PT VTF  LINGLC  G + RAA+  D++   G
Sbjct: 112 IINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMG 171

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC-MPNEVTYGTIINGLVKLGRAVDG 351
              N  TY  +I+GLC  G+   A+  L+++    C +   + Y TI++ L K G   + 
Sbjct: 172 HQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEA 231

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +   M  +    +   Y++LI GL   G+ ++A  L   MM KG  PN   ++ L+D 
Sbjct: 232 LNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDN 291

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C+ G    A+ I+  M++ G   +  TY+S++ G     +   AV++++ M     + N
Sbjct: 292 FCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPN 351

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V YS LIHG C+   + +A  +  +M++ G  PDVV +S++I G C AG  E A +LF 
Sbjct: 352 LVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFC 411

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            M   E    P++ T  I+L+ L K    S +I L   M     + ++V  NI L  +
Sbjct: 412 TM--HEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGM 467



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/535 (27%), Positives = 257/535 (48%), Gaps = 25/535 (4%)

Query: 74  PKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHL 133
           P  GS  L +ST      H+ +S +F +    L  MR  K      SF            
Sbjct: 19  PHFGS--LSNST------HFRSSSNFTNRAQFLDSMRDLKSEEAALSFFHKMVVMNPLPR 70

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH-----RALEFYNHIVNAKH--- 185
            ++  +LF  +V   H   T+     + ++ I+  +Y        L   NH V       
Sbjct: 71  EKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLG 130

Query: 186 ----MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
               + + P  +TF  +I  +C  G V  A +    +     + + YTY  +++GLCK  
Sbjct: 131 VMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAG 190

Query: 242 RLDEAVLLLDEMQVDGC-FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
               A+L L++++   C     + ++ +++ LCK+G +  A  L   M  KG  P+ V Y
Sbjct: 191 DTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAY 250

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+LIHGLC  G   +A +LL  M+    MPN  T+  +++   K G       ++  M  
Sbjct: 251 NSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVH 310

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                +   Y+++ISG     +  DA+K+++ M+ KG  PN V YS+LI G C+    ++
Sbjct: 311 VGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINK 370

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  +L EM+N+G   +  T+S+L+ GF ++GK   A E++  M +++   N    ++++ 
Sbjct: 371 ALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILD 430

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           GL +     EA  ++ +M     + +VV Y+ ++ G+C+ G + +A +LF+   CL  K 
Sbjct: 431 GLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFS---CLPSKG 487

Query: 541 -QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            + DV  Y  ++  LCK+  +  + +LL  M + GC P+  T N+F+  L ++ +
Sbjct: 488 IKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYD 542



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 197/441 (44%), Gaps = 46/441 (10%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMR-REKR 114
           +GN      F+D + +   +  SY     T+ ++I     +GD     + L +++ R   
Sbjct: 154 EGNVARAARFADSLEDMGHQSNSY-----TYGAIINGLCKAGDTSGAILYLEKIKGRNCD 208

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           + +  ++  I  +  K  +V EA+ LF  M  +   +  + ++NS+++ +   G +  A 
Sbjct: 209 LDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSK-GIQPDLVAYNSLIHGLCNFGRWKEAT 267

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
                  N     I+PN  TFN+++   C+ G++  A  +   M     EPD+ TY +++
Sbjct: 268 TLLG---NMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVI 324

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            G C  +++ +AV + + M   G  P  VT++ LI+G CK   + +A  L+  M   G  
Sbjct: 325 SGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLN 384

Query: 295 PNEVTYNTLIHGLCLKGN--------------------------LD---------KAVSL 319
           P+ VT++TLI G C  G                           LD         +A+SL
Sbjct: 385 PDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISL 444

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              M       N V Y  +++G+   G+  D   +   +  +   ++   Y+T+I GL K
Sbjct: 445 FREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCK 504

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           EG  +DA  L  +M E GC PN   Y+  + GL +      + + L  M   G +A+A T
Sbjct: 505 EGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADA-T 563

Query: 440 YSSLMKGFFESGKGHKAVEIW 460
            + L+  +F + K + A+ ++
Sbjct: 564 TTELLISYFSANKENSALHVF 584


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 150/592 (25%), Positives = 271/592 (45%), Gaps = 58/592 (9%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           + ++  A +GD   +++ L  MR       E + +    A+ +A   + A++ F+  V +
Sbjct: 66  AAVRRLAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHD 125

Query: 148 FHCKRTV--KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
             C R    + +N +++ +++E +            N +   + PN  T+NL+++ +C+ 
Sbjct: 126 LGCARPTAPRLYNHLIDALLRENMVGAVALVCG---NMRKDGVQPNVFTYNLLVRALCQN 182

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD-------------- 251
             V  A ++  EM  + C PD  TY T++  LC   R+DEA  +L               
Sbjct: 183 HRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVIL 242

Query: 252 ----------------EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
                           +M   G  P  +T+  ++N  CK GEL  A  ++  M + GC P
Sbjct: 243 ALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTP 302

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N  T+  L+ GL   G +  A+ +   MVA    P+ V+Y  +I GL  +G     + VL
Sbjct: 303 NVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVL 362

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             ME+     N   YSTLI G  K G  + A+ +W  M   GCKPN VVY+ ++   C+ 
Sbjct: 363 NDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKK 422

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
              ++AE ++ +M+   C  N  T+++L++      +  +A+ ++ +M ++ C  N   Y
Sbjct: 423 LMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTY 482

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + L+HGL  +G   +A  +  +M + G +  +V Y++++ GLC      EA+     M+ 
Sbjct: 483 NELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIV 542

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
                QPD FT+  +++A CK+  +  +  +L +M    C  +++   I +  L  +   
Sbjct: 543 R--GIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQ--- 597

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                D L +  + L K             ML + + P T TW  +V+ + R
Sbjct: 598 -----DKLEDAMVYLLK-------------MLYEGIYPNTVTWNVLVRGVFR 631



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 186/424 (43%), Gaps = 33/424 (7%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK-LVDNMFLKGCLP 295
           L     +D   L L EM++ G   T       +    + G   RA K     +   GC  
Sbjct: 71  LAAAGDVDGVQLELQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCAR 130

Query: 296 NEVT--YNTLIHGLCLKGNLDKAVSLL-DRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
                 YN LI  L L+ N+  AV+L+   M      PN  TY  ++  L +  R     
Sbjct: 131 PTAPRLYNHLIDAL-LRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAAR 189

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           ++L  M  +    ++  Y T++S L   G+ ++A ++          P    Y+A+I  L
Sbjct: 190 KMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLS-----AAPPVAASYNAVILAL 244

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           CR  +  E   ++ +M+  G   N  TY++++  F ++G+   A  I   M    C  N 
Sbjct: 245 CREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNV 304

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             ++ L+ GL  DG++ +A  +W  M++ G  P  V+Y+ +I GLC+ G ++ A  + N+
Sbjct: 305 ATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLND 364

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   +    P+  TY+ L++   K  ++  +I + N M   GC P++V     +    +K
Sbjct: 365 ME--QHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKK 422

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           L                +F +  +     +++ ML +   P T T+  +++ LC  +R+ 
Sbjct: 423 L----------------MFNQAES-----LIDKMLVENCPPNTVTFNTLIRSLCNCRRVG 461

Query: 653 AAIN 656
            A+ 
Sbjct: 462 RALG 465



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 4/191 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI+   N         V + MRR       +++  +     +     +A+++   M
Sbjct: 446 TFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEM 505

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +    + ++ ++N+V++ + Q  +   A+ F   ++      I P+  TF  +I   C+
Sbjct: 506 QNH-GIELSLVTYNTVVSGLCQMRMGREAMFFVGRMI---VRGIQPDAFTFTAIIHAYCK 561

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A  +   M V NC  +I  Y  LM  LC +++L++A++ L +M  +G +P  VT
Sbjct: 562 EGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVT 621

Query: 265 FNVLINGLCKN 275
           +NVL+ G+ +N
Sbjct: 622 WNVLVRGVFRN 632


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  239 bits (609), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 137/442 (30%), Positives = 226/442 (51%), Gaps = 6/442 (1%)

Query: 151 KRTVKSFNSVLNVIIQEGL---YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
           +R V +      V+    L   Y RA    +       M + PN  T+N +I T+C  G 
Sbjct: 123 ERVVGACGPAATVVAYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQ 182

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V +A+ +  +M  R C PD+ TY  L++  CK     +A+ L+D M+ +GC P  VT+NV
Sbjct: 183 VRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNV 242

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L++G+C  G++  A +L+ N+   GC P+ V YNT++ GLC       A  L+  M+   
Sbjct: 243 LMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLREN 302

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C PNE T+  +I  L + G      ++L  M +     N   Y+ +I+GL ++   + AM
Sbjct: 303 CPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAM 362

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L  +M   GCKP+ V Y+ L+ GLC   +  +AEE++  M  NGC  +  T+++L+   
Sbjct: 363 GLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFL 422

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + G    A+E++K M    C  N + YS +I GL +  KL +A  ++ +M  +G  PD 
Sbjct: 423 CQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK 482

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           + Y  +   L +  ++EEA++   ++   +    P    YN +L  LC+      +ID++
Sbjct: 483 I-YQLLAECLNDDDTIEEAIQTVRKL--QDSGISPHTVLYNAILLGLCRNGKTEFAIDIM 539

Query: 568 NSMMDRGCDPDLVTCNIFLTAL 589
             M+  GC PD +T  I +  L
Sbjct: 540 AYMVSSGCMPDDLTYVILIEGL 561



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 228/446 (51%), Gaps = 8/446 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + +L   Y  +G       V+  M  +         I      G+   V +A+ +   M
Sbjct: 137 AYGALTDGYCRAGRLGDARRVVGGMPVQPNAYTYNPLIHTLCERGQ---VRDALSVLDDM 193

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C   V ++N +L    +   Y +A+E  + +   +     PN +T+N+++  +C 
Sbjct: 194 LCR-GCAPDVVTYNILLEATCKGRGYRQAMELIDLM---RAEGCTPNNVTYNVLMDGMCG 249

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD+A++L R +P   C+P    Y T++ GLC   R  +A  L+ EM  + C P   T
Sbjct: 250 EGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEAT 309

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FNV+I  LC+ G L +A +L++ M   GC  N VTYN +I+GLC + N+D A+ LL +M 
Sbjct: 310 FNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMK 369

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  C P+ VTY T++ GL    + VD   ++ +M +     +   ++TLI  L ++G   
Sbjct: 370 SYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMV 429

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA++++KQM +KGC PN++ YS +I GL +  K D+A E+  EM + G   +   Y  L 
Sbjct: 430 DAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLA 488

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +   +     +A++  + +  +    + V Y+ ++ GLC +GK   A  +   M+S GC 
Sbjct: 489 ECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCM 548

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLF 530
           PD + Y  +I GL   G + EA +L 
Sbjct: 549 PDDLTYVILIEGLAYEGYLNEARELL 574



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/343 (33%), Positives = 190/343 (55%), Gaps = 5/343 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++A+ L   +     CK +  ++N+VL  +     +  A E    ++     N  PN  
Sbjct: 253 VDDALELLRNL-PSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRE---NCPPNEA 308

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN+VI ++CR GL+  AIQL  +M    C  +I TY  +++GLC++  +D A+ LL +M
Sbjct: 309 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 368

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  GC P  VT+N L+ GLC   +   A +L+DNM   GCLP+ VT+NTLI  LC KG +
Sbjct: 369 KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 428

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A+ +  +M    C PN +TY TII+GL K  +      +   M  + F+ ++ IY  L
Sbjct: 429 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLL 487

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
              L  +   E+A++  +++ + G  P+TV+Y+A++ GLCR GK + A +I+  M+++GC
Sbjct: 488 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 547

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
             +  TY  L++G    G  ++A E+   +   + + N +  S
Sbjct: 548 MPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKS 590



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 189/398 (47%), Gaps = 33/398 (8%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE--VTYNTLIHGLCLKGNLDKAV 317
           P     N L+  LC+ G    A ++V       C P    V Y  L  G C  G L  A 
Sbjct: 101 PDAALANRLVRDLCRRGRPDDAERVV-----GACGPAATVVAYGALTDGYCRAGRLGDAR 155

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            ++  M      PN  TY  +I+ L + G+  D   VL  M  R    +   Y+ L+   
Sbjct: 156 RVVGGMPVQ---PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEAT 212

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K      AM+L   M  +GC PN V Y+ L+DG+C  G  D+A E+L  + ++GC  + 
Sbjct: 213 CKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPST 272

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             Y++++KG   + +   A E+  +M + NC  NE  ++V+I+ LC  G L++A  +  +
Sbjct: 273 VNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEK 332

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M   GC  ++V Y+++I+GLC   +V+ A+ L ++M       +PD+ TYN LL  LC  
Sbjct: 333 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSY--GCKPDIVTYNTLLKGLCSA 390

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
           +    + +L+++M   GC PD VT N  +  L +K          L   AI +FK+    
Sbjct: 391 AQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQK---------GLMVDAIEVFKQ---- 437

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                   M  K  +P + T+  ++  L +  ++  A+
Sbjct: 438 --------MPDKGCTPNSITYSTIISGLAKATKLDQAL 467



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 5/289 (1%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           ++TF  +I      G  +    +L +M +        ++  I     +   V+ A+ L  
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 366

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M   + CK  + ++N++L  +     +  A E  +   N      LP+ +TFN +I  +
Sbjct: 367 KM-KSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMD---NMTQNGCLPDNVTFNTLIGFL 422

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ GL+ +AI++F++MP + C P+  TY T++ GL K  +LD+A+ L +EM   G  P  
Sbjct: 423 CQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK 482

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           + + +L   L  +  +  A + V  +   G  P+ V YN ++ GLC  G  + A+ ++  
Sbjct: 483 I-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAY 541

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           MV+S CMP+++TY  +I GL   G   +   +L+ +  R   VN  I S
Sbjct: 542 MVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKS 590


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 157/509 (30%), Positives = 252/509 (49%), Gaps = 22/509 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ +L+  +  +G+    E V+  MR E        +F  +     KA  +E A ++F  
Sbjct: 47  TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 106

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV E      V S+N++L+   + G  H +L  ++ +       ++P+ +TF  +I   C
Sbjct: 107 MVREGLAPDVV-SYNTLLSGYCKVGCLHESLAVFSEMT---QRGLVPDVVTFTSLIHATC 162

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G ++ A+ L  +M  R    +  T+  L+DG CK+  LD+A+L ++EM+  G  P+ V
Sbjct: 163 KAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVV 222

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N LING CK G +  A +L+  M  K   P+ VTY+T+I G C  GNLD A  L  +M
Sbjct: 223 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +    +P+ +TY ++I GL +  R  D   +  +M +     +E+ Y+TLI G  KEG  
Sbjct: 283 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 342

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E A+ L  +M+ KG  P+ V YS LI+GL +  +  EA  +LF++ +     +   Y +L
Sbjct: 343 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 402

Query: 444 M---------------KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           M               KGF   G   +A ++++ M   N   +   YS+LIHG C  G +
Sbjct: 403 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 462

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           R+A     QML  G  P+  +  S++ GL   G V EA     ++L   P +  +     
Sbjct: 463 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 522

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           I LN   K+ N+   ID+L  M   G  P
Sbjct: 523 IDLNR--KEGNVDALIDVLCGMARDGLLP 549



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 218/393 (55%), Gaps = 3/393 (0%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            + PN  T+N++++ +C  G ++ A+ +  +M    C P+  TY TL+   C+   LD A
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64

Query: 247 VLLLDEMQVDG-CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
             ++  M+ +G   P  VTFN ++NGLCK G +  A K+ D M  +G  P+ V+YNTL+ 
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLS 124

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C  G L +++++   M     +P+ VT+ ++I+   K G       ++  M ER   +
Sbjct: 125 GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRM 184

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           NE  ++ LI G  K+G  +DA+   ++M + G +P+ V Y+ALI+G C++G+ D A E++
Sbjct: 185 NEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELI 244

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM       +  TYS+++ G+ + G    A ++ + M K   + + + YS LI GLCE+
Sbjct: 245 REMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEE 304

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            +L +A  ++  ML  G +PD   Y+++I G C  G+VE+AL L +EM  +     PDV 
Sbjct: 305 KRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM--IRKGVLPDVV 362

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           TY++L+N L K +    +  LL  +      PD
Sbjct: 363 TYSVLINGLSKSARTKEAHRLLFKLYHEDPVPD 395



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 205/368 (55%), Gaps = 3/368 (0%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P++YTY  L+  LC   RL+EAV ++ +M+  GC P  VT+N L+   C+ GEL  A ++
Sbjct: 8   PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67

Query: 285 VDNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           V  M  +G   PN VT+N++++GLC  G ++ A  + D MV     P+ V+Y T+++G  
Sbjct: 68  VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K+G   +   V   M +R    +   +++LI    K G  E A+ L  QM E+G + N V
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEV 187

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            ++ALIDG C+ G  D+A   + EM   G   +   Y++L+ G+ + G+   A E+ ++M
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
                  + V YS +I G C+ G L  A  +  +ML +G  PD + YSS+I GLC    +
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            +A +LF  ML L    QPD FTY  L++  CK+ N+  ++ L + M+ +G  PD+VT +
Sbjct: 308 NDACELFENMLQL--GVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYS 365

Query: 584 IFLTALKE 591
           + +  L +
Sbjct: 366 VLINGLSK 373



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 144/464 (31%), Positives = 235/464 (50%), Gaps = 28/464 (6%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY---HRALEFYNHIVNAKHMNILP 190
           +EEA+ +   M     C     ++N+++    + G      R +       NAK     P
Sbjct: 26  LEEAVGVVGDMRGA-GCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAK-----P 79

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N +TFN ++  +C+ G ++ A ++F EM      PD+ +Y TL+ G CK   L E++ + 
Sbjct: 80  NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 139

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM   G  P  VTF  LI+  CK G L +A  LV  M  +G   NEVT+  LI G C K
Sbjct: 140 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 199

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEYI 369
           G LD A+  ++ M      P+ V Y  +ING  KLGR +D AR L+  ME ++   +   
Sbjct: 200 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR-MDLARELIREMEAKRVKPDVVT 258

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YST+ISG  K G  + A +L ++M++KG  P+ + YS+LI GLC   + ++A E+   M+
Sbjct: 259 YSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENML 318

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   + FTY++L+ G  + G   KA+ +  +M +   + + V YSVLI+GL +  + +
Sbjct: 319 QLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTK 378

Query: 490 EARMVWTQMLSRGCKPDVVAYS---------------SMIHGLCNAGSVEEALKLFNEML 534
           EA  +  ++      PD + Y                +++ G C  G ++EA K++  M 
Sbjct: 379 EAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSM- 437

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
            L+   + D   Y+IL++  C+  N+  ++     M+  G  P+
Sbjct: 438 -LDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 480



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 189/371 (50%), Gaps = 26/371 (7%)

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   G  PN  TYN L+  LC +G L++AV ++  M  + C PN VTY T++    + G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 348 AVDGARVLMSM--EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
            +DGA  ++S+  EE     N   ++++++GL K G+ E A K++ +M+ +G  P+ V Y
Sbjct: 61  -LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + L+ G C+VG   E+  +  EM   G   +  T++SL+    ++G   +AV +   M +
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                NEV ++ LI G C+ G L +A +   +M   G +P VV Y+++I+G C  G ++ 
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A +L  EM     + +PDV TY+ +++  CK  N+  +  L   M+ +G  PD +T +  
Sbjct: 240 ARELIREM--EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 297

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
           +  L E+                     +R +   ++ E MLQ  + P   T+  ++   
Sbjct: 298 IRGLCEE---------------------KRLNDACELFENMLQLGVQPDEFTYTTLIDGH 336

Query: 646 CRPKRIQAAIN 656
           C+   ++ A++
Sbjct: 337 CKEGNVEKALS 347


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 147/527 (27%), Positives = 255/527 (48%), Gaps = 53/527 (10%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +L+  Y   G     E VL   R      +  ++  +   Y ++  + +A+RL  +M   
Sbjct: 158 TLVAGYCRDGSLWDAERVLEAARASGAANV-VTYTALIDGYCRSGRLTDALRLIASM--- 213

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
                   ++N+VL  +     +  A E    ++     N  PN +TF   I+  C+ GL
Sbjct: 214 -PVAPDTYTYNTVLKGLCFAKQWEEAEELMREMI---RNNCHPNEVTFATQIRAFCQNGL 269

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D A++L  +MP   C PD+  Y TL++G  +  R+D+A+ LL  M    C P  V +N 
Sbjct: 270 LDRAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNA 326

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
            + GLC  G      +L+  M  K C PN+ T++TLI+ LC     + A+ +L++M    
Sbjct: 327 ALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYG 386

Query: 328 CMPNEVTYGTIING--------------------------------LVKLGRAVDGARVL 355
            MP+ V+Y TII+                                 L +  R  D A ++
Sbjct: 387 YMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELM 446

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M +   H NE  ++ LI  L + G+ +DA+++++ M +  C P+ V YS+LI+G    
Sbjct: 447 AKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQ 506

Query: 416 GKPDEAEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           G     +++ F++  +  C A+ F+Y++ +KG   + +   A E+  DM   +C+ NEV 
Sbjct: 507 G----LDKVAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVT 562

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           +++LI+ LC+ G +  A  V+ QM   G  PD+  Y+++I+G    G +++ALK  + M 
Sbjct: 563 FNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMP 622

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           C     +PD  +YN +L  LC+      +  L+  M+ + C P+ VT
Sbjct: 623 C-----EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVT 664



 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 153/507 (30%), Positives = 258/507 (50%), Gaps = 31/507 (6%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R   + N V    + +G Y R+    + +     M + P+T T+N V+K +C     + A
Sbjct: 180 RASGAANVVTYTALIDG-YCRSGRLTDALRLIASMPVAPDTYTYNTVLKGLCFAKQWEEA 238

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
            +L REM   NC P+  T+ T +   C+   LD AV LL++M   GC P  V ++ L+NG
Sbjct: 239 EELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNG 298

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
             ++G +  A KL+  M    C PN V YN  + GLC+ G  D+   L+  MV   C PN
Sbjct: 299 FSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPN 355

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
           + T+ T+IN L +   A     VL  M++  +  +   Y+T+IS   ++  A+DA+KL  
Sbjct: 356 DATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLN 415

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M+   CKP+T+ ++A++  LCR  +  +A E++ +M+   C  N  T++ L+    ++G
Sbjct: 416 SML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNG 472

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +   A+E+++ M K  C  + V YS LI+G  E G  + A  ++  M    C+ D+ +Y+
Sbjct: 473 QVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSM---PCRADIFSYN 529

Query: 512 SMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           + + GLC A   ++A +L  +M+   CL     P+  T+NIL+N+LC++  ++ +I++  
Sbjct: 530 ATLKGLCMAARWDDAGELIADMVTKDCL-----PNEVTFNILINSLCQKGLVNRAIEVYE 584

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL------------NELAIRLFKRQRT 616
            M   G  PD+ T N  +    E+     D   FL            N +   L + +R 
Sbjct: 585 QMPKYGITPDIFTYNALINGYSEQ-GCLDDALKFLSTMPCEPDTISYNSILKGLCRAERW 643

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQ 643
               K+V  ML+K  +P   T++   Q
Sbjct: 644 KDAEKLVTEMLRKNCTPNEVTFKYANQ 670



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/414 (31%), Positives = 222/414 (53%), Gaps = 14/414 (3%)

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++ A   +   N +T+  +I   CR G + +A++L   MPV    PD YTY T++ GLC
Sbjct: 174 RVLEAARASGAANVVTYTALIDGYCRSGRLTDALRLIASMPV---APDTYTYNTVLKGLC 230

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
              + +EA  L+ EM  + C P  VTF   I   C+NG L RA +L++ M   GC+P+ V
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVV 290

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y+TL++G    G +D A+ LL  M+   C PN V Y   + GL   GR  +   ++  M
Sbjct: 291 IYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEM 347

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             +    N+  +STLI+ L +   AE A+++ +QM + G  P+ V Y+ +I         
Sbjct: 348 VRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACA 407

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A ++L  M+   C  +  ++++++K    + + + A E+   M K +C  NE+ +++L
Sbjct: 408 DDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNIL 464

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I  LC++G++++A  ++  M    C PD+V YSS+I+G    G  + A  LF  M C   
Sbjct: 465 IDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPC--- 521

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
             + D+F+YN  L  LC  +    + +L+  M+ + C P+ VT NI + +L +K
Sbjct: 522 --RADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQK 573



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 172/330 (52%), Gaps = 13/330 (3%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  +T N+LI  LC    L  A ++++ +   G   + V++NTL+ G C  G+L  A  +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L+   AS    N VTY  +I+G  + GR  D  R++ SM       + Y Y+T++ GL  
Sbjct: 176 LEAARASG-AANVVTYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLKGLCF 231

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             + E+A +L ++M+   C PN V ++  I   C+ G  D A E+L +M   GC  +   
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YS+L+ GF E G+   A+++   M    C  N VCY+  + GLC  G+  E   +  +M+
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            + C P+   +S++I+ LC     E A+++  +M   +    PDV +YN +++   +Q+ 
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQM--QKYGYMPDVVSYNTIISCFSEQAC 406

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              ++ LLNSM+   C PD ++ N  L  L
Sbjct: 407 ADDALKLLNSML---CKPDTISFNAVLKCL 433



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 172/345 (49%), Gaps = 13/345 (3%)

Query: 96  SGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK 155
           +G +  +  ++  M R+     + +F  +  +  +  L E AI +   M  ++     V 
Sbjct: 334 AGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQM-QKYGYMPDVV 392

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+N++++   ++     AL+  N ++        P+T++FN V+K +CR     +A +L 
Sbjct: 393 SYNTIISCFSEQACADDALKLLNSML------CKPDTISFNAVLKCLCRAERWYDAAELM 446

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M   +C  +  T+  L+D LC+  ++ +A+ + + M    C P  VT++ LING  + 
Sbjct: 447 AKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQ 506

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G    A  L  +M    C  +  +YN  + GLC+    D A  L+  MV   C+PNEVT+
Sbjct: 507 GLDKVAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTF 563

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +IN L + G       V   M +     + + Y+ LI+G  ++G  +DA+K    M  
Sbjct: 564 NILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTM-- 621

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
             C+P+T+ Y++++ GLCR  +  +AE+++ EM+   C  N  T+
Sbjct: 622 -PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 154/540 (28%), Positives = 267/540 (49%), Gaps = 24/540 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+  F+ M+   H   ++  F  +L  I +   Y   L     +       I  N  
Sbjct: 55  LDDALSSFNRML-HMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKM---DSFGIPHNVY 110

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I + C L  V+ A  +  ++    C+PD  ++ TL+ GLC E ++ EA+ L D+M
Sbjct: 111 TLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKM 170

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  V +  LINGLCK G    A +L+ +M    C P+ V Y TLIH LC     
Sbjct: 171 IWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQ 230

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +L   M+     PN VT  +++  L  LG       +L  M + K   N    +T+
Sbjct: 231 TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTV 290

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEG    A  +   M + G +P+ V Y+ALIDG C   + DEA ++   M++ GC
Sbjct: 291 VDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGC 350

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A N F+Y++L+ G+ +  +  KA+ ++++M +   + N V Y+ LIHGLC  G+L++A  
Sbjct: 351 APNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIA 410

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           ++ +M++ G  PD+V Y  ++  LC    +++A+ L      +E  +  PD+  Y I+++
Sbjct: 411 LFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA---IEGSNLDPDIQIYTIVID 467

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK----------LEAPQ----- 597
            +C+   +  + DL +++  +G  P++ T NI    L ++          +E  +     
Sbjct: 468 GMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSA 527

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
           DG  + N +     +   TS   +++E ML +  S   ST   +V  L      Q+  +K
Sbjct: 528 DGCTY-NTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHK 586



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 209/421 (49%), Gaps = 5/421 (1%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           AIRL  +M ++ +C+  V  + ++++ + ++    +A   ++ ++      I PN +T N
Sbjct: 198 AIRLLRSM-EKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITK---GISPNIVTCN 253

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            ++  +C LG   +   L  EM      P+  +  T++D LCKE  + +A  ++D M   
Sbjct: 254 SLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQS 313

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P  VT+  LI+G C   E+  A K+ D M  KGC PN  +YNTLI+G C    +DKA
Sbjct: 314 GVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKA 373

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           + L + M   K +PN VTY T+I+GL  +GR  D   +   M       +   Y  L+  
Sbjct: 374 MYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDY 433

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K    + AM L K +      P+  +Y+ +IDG+CR G+ ++A ++   + + G   N
Sbjct: 434 LCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPN 493

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            +TY+ +  G  + G   +A +++ +M +N C  +   Y+ +  G   + +   A  +  
Sbjct: 494 VWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLE 553

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAG-SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
           +ML+RG   DV   + ++  L + G    EA KL +    L  + +  VF     +NAL 
Sbjct: 554 EMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMFPHLRIQVKDTVFCKEDDINALG 613

Query: 556 K 556
           K
Sbjct: 614 K 614


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 236/455 (51%), Gaps = 11/455 (2%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C+ +V ++  +L  + +   +  A+   + +   +     PN +T+N++I  +CR G VD
Sbjct: 183 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM---RAKGCTPNIVTYNVIINGMCREGRVD 239

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +A ++   +     +PDI +Y T++ GLC   R D+  +L  EM    C P  VTF++L+
Sbjct: 240 DAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 299

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
              C+ G + RA +++  M   GC PN    N +I+ +C +G +D A   L+ M    C 
Sbjct: 300 RFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCN 359

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+ ++Y T++ GL + GR      +L  M  +    NE  ++T I  L ++G  E A+KL
Sbjct: 360 PDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKL 419

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN-GCAANAFTYSSLMKGFF 448
            + M E GC    V Y+AL+ G C  G+ D A     E+ NN  C  N  TY++L+ G  
Sbjct: 420 IELMPEYGCSVGIVTYNALVHGFCVQGRVDSA----LELFNNLPCEPNTITYTTLLTGLC 475

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            + +   A E+  +M + +C  N V ++VL+   C+ G + EA  +  QM+  GC P+++
Sbjct: 476 HAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLI 535

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            +++++ G+    + EEAL+L + +  +      D  TY+ +++ L ++     +I +L+
Sbjct: 536 TFNTLLDGITKDCNSEEALELLHGL--VSKGVSLDTITYSSVVDVLSREDRTEEAIQMLH 593

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
           ++ D G  P +   N  L AL ++ E  Q   DF 
Sbjct: 594 AVQDMGMRPKVGMYNKILFALCKRCETDQ-AIDFF 627



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 239/452 (52%), Gaps = 23/452 (5%)

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           R C+P + TY  L++ +CK +   EA+ +LDEM+  GC P  VT+NV+ING+C+ G +  
Sbjct: 181 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 240

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A ++++ +   G  P+ V+Y T++ GLC     D    L   MV  KC+PNEVT+  ++ 
Sbjct: 241 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 300

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
              + G      +VL  M +     N  + + +I+ + K+G+ +DA      M   GC P
Sbjct: 301 FFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNP 360

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           +T+ Y+ ++ GLCR G+ + A+E+L EM+   C  N  T+++ +    + G   +A+++ 
Sbjct: 361 DTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLI 420

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           + M +  C    V Y+ L+HG C  G++  A  ++  +    C+P+ + Y++++ GLC+A
Sbjct: 421 ELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLTGLCHA 477

Query: 521 GSVEEALKLFNEMLCLEPKSQP-DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
             ++ A +L  EM+    K  P +  T+N+L++  C++  +  +++L+N MM+ GC P+L
Sbjct: 478 ERLDAAAELLAEMI---QKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNL 534

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVE 624
           +T N  L  + +   + ++  + L+ L  +               L +  RT    +++ 
Sbjct: 535 ITFNTLLDGITKDCNS-EEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLH 593

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +    + P+   + +++  LC+      AI+
Sbjct: 594 AVQDMGMRPKVGMYNKILFALCKRCETDQAID 625



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 244/508 (48%), Gaps = 44/508 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L++    S  F     VL  MR +       ++  I     +   V++A  + + +
Sbjct: 189 TYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRL 248

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
              +  +  + S+ +VL  +     +      +  +V+ K    +PN +TF+++++  CR
Sbjct: 249 -SSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK---CVPNEVTFDMLVRFFCR 304

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G+V+ AIQ+ ++M    C P+      +++ +CK+ R+D+A   L+ M + GC P  ++
Sbjct: 305 GGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTIS 364

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  ++ GLC+ G    A +L+  M  K C PNEVT+NT I  LC KG +++A+ L++ M 
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 424

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C    VTY  +++G    GR VD A  L +        N   Y+TL++GL    + +
Sbjct: 425 EYGCSVGIVTYNALVHGFCVQGR-VDSALELFN--NLPCEPNTITYTTLLTGLCHAERLD 481

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A +L  +M++K C  N V ++ L+   C+ G  +EA E++ +M+ +GC  N  T+++L+
Sbjct: 482 AAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 541

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  +     +A+E                   L+HGL                +S+G  
Sbjct: 542 DGITKDCNSEEALE-------------------LLHGL----------------VSKGVS 566

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D + YSS++  L      EEA+++ + +   +   +P V  YN +L ALCK+     +I
Sbjct: 567 LDTITYSSVVDVLSREDRTEEAIQMLHAV--QDMGMRPKVGMYNKILFALCKRCETDQAI 624

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           D    M+  GC P+  T  I +  L  +
Sbjct: 625 DFFAYMVSNGCMPNESTYIILIEGLAHE 652



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 227/437 (51%), Gaps = 8/437 (1%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           + EI N     G +Q    ++ ++++    +  +  ++++   M  +K V  E +F  + 
Sbjct: 241 AKEILNRLSSYG-FQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLV 299

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           + + +  +VE AI++   M  +  C       N V+N I ++G    A +F N   N   
Sbjct: 300 RFFCRGGMVERAIQVLQQM-SQHGCTPNTTLCNIVINAICKQGRVDDAYDFLN---NMGM 355

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
               P+T+++  V++ +CR G  ++A +L  EM  +NC P+  T+ T +  LC++  +++
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ L++ M   GC    VT+N L++G C  G +  A +L +N+    C PN +TY TL+ 
Sbjct: 416 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNL---PCEPNTITYTTLLT 472

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC    LD A  LL  M+   C  N VT+  +++   + G   +   ++  M E     
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   ++TL+ G+ K+  +E+A++L   ++ KG   +T+ YS+++D L R  + +EA ++L
Sbjct: 533 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQML 592

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             + + G       Y+ ++    +  +  +A++ +  M  N C+ NE  Y +LI GL  +
Sbjct: 593 HAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHE 652

Query: 486 GKLREARMVWTQMLSRG 502
           G L+EAR V +++ ++G
Sbjct: 653 GLLKEARYVLSELYAKG 669



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 204/446 (45%), Gaps = 55/446 (12%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           PTP T     +G     E          M  +GC P+ VTY  L+  +C      +A+++
Sbjct: 151 PTP-TPTRPSSGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNV 209

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG--- 376
           LD M A  C PN VTY  IING+ + GR  D   +L  +    F  +   Y+T++ G   
Sbjct: 210 LDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCA 269

Query: 377 ---------LFKE-----------------------GKAEDAMKLWKQMMEKGCKPNTVV 404
                    LF E                       G  E A+++ +QM + GC PNT +
Sbjct: 270 ARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTL 329

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
            + +I+ +C+ G+ D+A + L  M   GC  +  +Y+++++G   +G+   A E+  +M 
Sbjct: 330 CNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMV 389

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           + NC  NEV ++  I  LC+ G + +A  +   M   GC   +V Y++++HG C  G V+
Sbjct: 390 RKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVD 449

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
            AL+LFN + C     +P+  TY  LL  LC    +  + +LL  M+ + C  + VT N+
Sbjct: 450 SALELFNNLPC-----EPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNV 504

Query: 585 FLT------ALKEKLEAPQDGTDF--------LNELAIRLFKRQRTSGGFKIVEVMLQKF 630
            ++       ++E +E      +          N L   + K   +    +++  ++ K 
Sbjct: 505 LVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKG 564

Query: 631 LSPQTSTWERVVQELCRPKRIQAAIN 656
           +S  T T+  VV  L R  R + AI 
Sbjct: 565 VSLDTITYSSVVDVLSREDRTEEAIQ 590



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 109/227 (48%), Gaps = 8/227 (3%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E+FN+ P     +    T+ +L+    ++    +   +L  M ++   +   +F  +   
Sbjct: 453 ELFNNLP----CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSF 508

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           + +   VEEA+ L + M+ E  C   + +FN++L+ I ++     ALE  + +V +K ++
Sbjct: 509 FCQKGFVEEAMELVNQMM-EHGCTPNLITFNTLLDGITKDCNSEEALELLHGLV-SKGVS 566

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           +  +T+T++ V+  + R    + AIQ+   +      P +  Y  ++  LCK    D+A+
Sbjct: 567 L--DTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAI 624

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
                M  +GC P   T+ +LI GL   G L  A  ++  ++ KG L
Sbjct: 625 DFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 671


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  238 bits (607), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 246/493 (49%), Gaps = 6/493 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T   LI  Y N         VL  M R        +F  + K       + EA  L   M
Sbjct: 129 TLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKM 188

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH---MNILPNTLTFNLVIKT 201
           V     +  V ++ ++LN +   G    A++ +  ++N      + I PN + +  +I +
Sbjct: 189 V-RMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDS 247

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+ GL+D   +LF EM  R   PD+  Y +++ G+C   R + A  L +EM  +G  P 
Sbjct: 248 LCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPN 307

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VTFNVLI+ LCK G++  A  L+  M  +G  P+  TYNTLI G CL+G +D A  L  
Sbjct: 308 VVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFV 367

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M +     + V+Y  +ING  K GR V+  ++   M  ++       Y+TL++GLF+EG
Sbjct: 368 SMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREG 427

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K  DA  L+ +M      P +  Y+ L+DGLC+     EA E+   + N+    +   ++
Sbjct: 428 KVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFN 487

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            L+ G  ++ K   A E++  ++      N + Y+V+IHGLC+ G+L  A+ ++  M  +
Sbjct: 488 CLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEK 547

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GC P++V +++++ G C    +++ ++L  EM   E    PD  T +I+++ L K     
Sbjct: 548 GCAPNLVTFNTLMRGFCQNDEMQKVVELLQEM--AEKDFSPDASTISIVVDLLSKDEKYR 605

Query: 562 HSIDLLNSMMDRG 574
             + LL +   +G
Sbjct: 606 EYLHLLPTFPAQG 618



 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 245/488 (50%), Gaps = 32/488 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A   +NH+++   M   P   +FN ++  V ++    + I L++ M +    PD  T   
Sbjct: 76  AFSVFNHLID---MQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNI 132

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C  N++D  + +L EM   G  P  VTF  L+ GLC    +  A  L+  M   G
Sbjct: 133 LINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMG 192

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV------ASKCMPNEVTYGTIINGLVKLG 346
             PN VTY TL++GLC+ GN   AV L + M+           PN V Y TII+ L K G
Sbjct: 193 YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDG 252

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
               G  + + M+ R    +   YS++I G+   G+ E A  L+ +M+++G  PN V ++
Sbjct: 253 LIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFN 312

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            LID LC+ GK +EA  +L  MI  G + + FTY++L+ GF   G+   A +++  M   
Sbjct: 313 VLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESK 372

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               + V Y+VLI+G C+ G++ EA+ ++ +M+ +   P V+ Y++++ GL   G V +A
Sbjct: 373 GIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDA 432

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             LF EM   +    P+  TYNILL+ LCK +++S +++L + + +    P +   N  +
Sbjct: 433 WNLFGEMKVHD--LTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLI 490

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
             L +  +          E+A  LF R    G            L P   T+  ++  LC
Sbjct: 491 DGLCKARKI---------EIARELFNRLSHEG------------LEPNVITYTVMIHGLC 529

Query: 647 RPKRIQAA 654
           +  +++ A
Sbjct: 530 KSGQLENA 537



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 152/535 (28%), Positives = 257/535 (48%), Gaps = 50/535 (9%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA  +F+ ++D       + SFN++L  + +   Y   +  Y  +     + + P+ +T 
Sbjct: 75  EAFSVFNHLID-MQPTPPISSFNTLLGAVAKIKRYFDVISLYKRM---SLIGLAPDFITL 130

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N++I   C L  VD  + +  EM  R   P+  T+ +L+ GLC  +R+ EA  LL +M  
Sbjct: 131 NILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVR 190

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM--------------------------- 288
            G  P  VT+  L+NGLC  G    A KL + M                           
Sbjct: 191 MGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCK 250

Query: 289 ----------FL----KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
                     FL    +G  P+ V Y+++IHG+C  G  + A  L + MV     PN VT
Sbjct: 251 DGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVT 310

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           +  +I+ L K G+  +   +L  M +R    + + Y+TLI G   EG+ +DA  L+  M 
Sbjct: 311 FNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSME 370

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            KG + + V Y+ LI+G C+ G+  EA+++  EM+         TY++L+ G F  GK  
Sbjct: 371 SKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVR 430

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A  ++ +M  ++       Y++L+ GLC++  L EA  ++  + +   +P +  ++ +I
Sbjct: 431 DAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLI 490

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GLC A  +E A +LFN +       +P+V TY ++++ LCK   + ++ DL   M ++G
Sbjct: 491 DGLCKARKIEIARELFNRLS--HEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQK 629
           C P+LVT N  +    +  E  Q   + L E+A + F    ++    IV  +L K
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEM-QKVVELLQEMAEKDFSPDAST--ISIVVDLLSK 600



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 159/561 (28%), Positives = 268/561 (47%), Gaps = 22/561 (3%)

Query: 43  SAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGD--STFYSLIQHYANSGDFK 100
           S      Q+E   + N KS      E F+    L   Q     S+F +L+   A     K
Sbjct: 50  SNAPDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAK---IK 106

Query: 101 SLEMVLYRMRREKRVVLEKSFI---FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSF 157
               V+   +R   + L   FI    +   Y   + V+  + +   M+   H   TV +F
Sbjct: 107 RYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTV-TF 165

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
            S++  +    L  R  E    +     M   PN +T+  ++  +C  G    A++L  E
Sbjct: 166 TSLVKGLC---LGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEE 222

Query: 218 MPVRN------CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           M   N       +P++  YCT++D LCK+  +D+   L  EM+  G  P  V ++ +I+G
Sbjct: 223 MLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHG 282

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           +C  G    A  L + M  +G  PN VT+N LI  LC  G +++A  LL  M+     P+
Sbjct: 283 MCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPD 342

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             TY T+I+G    GR  D   + +SME +    +   Y+ LI+G  K G+  +A KL++
Sbjct: 343 TFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYR 402

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +MM K   P  + Y+ L+ GL R GK  +A  +  EM  +     + TY+ L+ G  ++ 
Sbjct: 403 EMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNN 462

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              +A+E++  +  ++   +   ++ LI GLC+  K+  AR ++ ++   G +P+V+ Y+
Sbjct: 463 HLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYT 522

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSM 570
            MIHGLC +G +E A  LF   L +E K   P++ T+N L+   C+   +   ++LL  M
Sbjct: 523 VMIHGLCKSGQLENAKDLF---LGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEM 579

Query: 571 MDRGCDPDLVTCNIFLTALKE 591
            ++   PD  T +I +  L +
Sbjct: 580 AEKDFSPDASTISIVVDLLSK 600



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 185/405 (45%), Gaps = 33/405 (8%)

Query: 260 PTP--VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           PTP   +FN L+  + K         L   M L G  P+ +T N LI+  C    +D  +
Sbjct: 88  PTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGL 147

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           ++L  M+     PN VT+ +++ GL    R  +   +L  M    +  N   Y TL++GL
Sbjct: 148 AVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGL 207

Query: 378 FKEGKAEDAMKLWKQMMEKG------CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
              G    A+KL ++M+          KPN V Y  +ID LC+ G  D+ +E+  EM   
Sbjct: 208 CMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGR 267

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G + +   YSS++ G   +G+   A  ++ +M       N V ++VLI  LC+ GK+ EA
Sbjct: 268 GISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEA 327

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNIL 550
             +   M+ RG  PD   Y+++I G C  G +++A  LF  M   E K  + D  +YN+L
Sbjct: 328 NHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSM---ESKGIETDAVSYNVL 384

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +N  CK   +  +  L   MM +   P ++T N  LT L                     
Sbjct: 385 INGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL--------------------- 423

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           F+  +    + +   M    L+P++ T+  ++  LC+   +  A+
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAM 468


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 130/404 (32%), Positives = 215/404 (53%), Gaps = 3/404 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M + PN  T+N +I T+C  G V +A+ +  +M  R C PD+ TY  L++  CK     +
Sbjct: 1   MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ L+D M+ +GC P  VT+NVL++G+C  G++  A +L+ N+   GC P+ V YNT++ 
Sbjct: 61  AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC       A  L+  M+   C PNE T+  +I  L + G      ++L  M +     
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 180

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y+ +I+GL ++   + AM L  +M   GCKP+ V Y+ L+ GLC   +  +AEE++
Sbjct: 181 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELM 240

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M  NGC  +  T+++L+    + G    A+E++K M    C  N + YS +I GL + 
Sbjct: 241 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 300

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            KL +A  ++ +M  +G  PD + Y  +   L +  ++EEA++   ++   +    P   
Sbjct: 301 TKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKL--QDSGISPHTV 357

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            YN +L  LC+      +ID++  M+  GC PD +T  I +  L
Sbjct: 358 LYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGL 401



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 215/397 (54%), Gaps = 5/397 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V +A+ +   M+    C   V ++N +L    +   Y +A+E  + +   +     PN +
Sbjct: 23  VRDALSVLDDMLCR-GCAPDVVTYNILLEATCKGRGYRQAMELIDLM---RAEGCTPNNV 78

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N+++  +C  G VD+A++L R +P   C+P    Y T++ GLC   R  +A  L+ EM
Sbjct: 79  TYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEM 138

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             + C P   TFNV+I  LC+ G L +A +L++ M   GC  N VTYN +I+GLC + N+
Sbjct: 139 LRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNV 198

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A+ LL +M +  C P+ VTY T++ GL    R VD   ++ +M +     +   ++TL
Sbjct: 199 DGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTL 258

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I  L ++G   DA++++KQM +KGC PN++ YS +I GL +  K D+A E+  EM + G 
Sbjct: 259 IGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGF 318

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +   Y  L +   +     +A++  + +  +    + V Y+ ++ GLC +GK   A  
Sbjct: 319 NPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAID 377

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +   M+S GC PD + Y  +I GL   G + EA +L 
Sbjct: 378 IMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 114/340 (33%), Positives = 188/340 (55%), Gaps = 5/340 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++A+ L   +     CK +  ++N+VL  +     +  A E    ++     N  PN  
Sbjct: 93  VDDALELLRNL-PSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRE---NCPPNEA 148

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN+VI ++CR GL+  AIQL  +M    C  +I TY  +++GLC++  +D A+ LL +M
Sbjct: 149 TFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKM 208

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  GC P  VT+N L+ GLC       A +L+DNM   GCLP+ VT+NTLI  LC KG +
Sbjct: 209 KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLM 268

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A+ +  +M    C PN +TY TII+GL K  +      +   M  + F+ ++ IY  L
Sbjct: 269 VDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLL 327

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
              L  +   E+A++  +++ + G  P+TV+Y+A++ GLCR GK + A +I+  M+++GC
Sbjct: 328 AECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGC 387

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
             +  TY  L++G    G  ++A E+   +   + + N +
Sbjct: 388 MPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSL 427



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 176/361 (48%), Gaps = 58/361 (16%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN  TYN LIH LC +G +  A+S+LD M+   C P+ VTY  ++    K GR   G R 
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCK-GR---GYR- 59

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
                                          AM+L   M  +GC PN V Y+ L+DG+C 
Sbjct: 60  ------------------------------QAMELIDLMRAEGCTPNNVTYNVLMDGMCG 89

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G  D+A E+L  + ++GC  +   Y++++KG   + +   A E+  +M + NC  NE  
Sbjct: 90  EGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEAT 149

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           ++V+I+ LC  G L++A  +  +M   GC  ++V Y+++I+GLC   +V+ A+ L ++M 
Sbjct: 150 FNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMK 209

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
               K  PD+ TYN LL  LC  +    + +L+++M   GC PD VT N  +  L +K  
Sbjct: 210 SYGCK--PDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQK-- 265

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   L   AI +FK+            M  K  +P + T+  ++  L +  ++  A
Sbjct: 266 -------GLMVDAIEVFKQ------------MPDKGCTPNSITYSTIISGLAKATKLDQA 306

Query: 655 I 655
           +
Sbjct: 307 L 307



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 143/289 (49%), Gaps = 5/289 (1%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           ++TF  +I      G  +    +L +M +        ++  I     +   V+ A+ L  
Sbjct: 147 EATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLS 206

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M   + CK  + ++N++L  +     +  A E  +   N      LP+ +TFN +I  +
Sbjct: 207 KM-KSYGCKPDIVTYNTLLKGLCSAARWVDAEELMD---NMTQNGCLPDNVTFNTLIGFL 262

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ GL+ +AI++F++MP + C P+  TY T++ GL K  +LD+A+ L +EM   G  P  
Sbjct: 263 CQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK 322

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           + + +L   L  +  +  A + V  +   G  P+ V YN ++ GLC  G  + A+ ++  
Sbjct: 323 I-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAY 381

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           MV+S CMP+++TY  +I GL   G   +   +L+ +  R   VN  I S
Sbjct: 382 MVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKS 430


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  238 bits (607), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 148/433 (34%), Positives = 223/433 (51%), Gaps = 15/433 (3%)

Query: 172 RALEFYNH---IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-----C 223
           RA EF      +   K M+I PN +TF ++I  +C+   VD A+++F +M          
Sbjct: 317 RAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLV 376

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPVTFNVLINGLCKNGELGRAA 282
           EPD+ TY TL+DGLCK  R +E + L++ M+    C P  VT+N LI+G CK   +  A 
Sbjct: 377 EPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAR 436

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +L D M   G  PN VT NTL+ G+C  G ++ AV   + M       N VTY  +I   
Sbjct: 437 ELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAF 496

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
             +        +   M E     +  +Y TLISGL + GK + A  +  +M E G  P+ 
Sbjct: 497 CNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDI 556

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V ++ LI+G CR  K DEA E+L EM N G   +  TY++L+  F ++G    A  + K 
Sbjct: 557 VSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKK 616

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG-CKPDVVAYSSMIHGLCNAG 521
           M K   V   V Y  LIH  C +G L EA  ++  M S     P+ V Y+ +I+ LC   
Sbjct: 617 MVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKN 676

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            V+ AL L ++M     K  P+  T+N +   L +++ +S + +L++ M +  C+PD +T
Sbjct: 677 QVDLALSLMDDMKVKGVK--PNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYIT 734

Query: 582 CNI---FLTALKE 591
             I   +L+A+ E
Sbjct: 735 MEILTEWLSAVGE 747



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 150/590 (25%), Positives = 266/590 (45%), Gaps = 86/590 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHT 143
           T  ++ +H +   +  +  + L++  +  ++ L   +   + + +G+A +V+E+  +++ 
Sbjct: 125 TLEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNE 184

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV----------NAKHM------- 186
           +      +R     N +++V+ ++G    AL   + ++          N  H+       
Sbjct: 185 LCPS---RRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSK 241

Query: 187 -----------------------NILPNTLTFNLVIKTVCRLGLVDNAIQ---------- 213
                                   + PN++    +I  +CR G  D A            
Sbjct: 242 RDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGG 301

Query: 214 -------------------------LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
                                    L  EM   + +P++ T+  L++ LCK  R+DEA+ 
Sbjct: 302 VMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALE 361

Query: 249 LLDEM---QVDGCF--PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNT 302
           + ++M   + +G    P  +T+N LI+GLCK G       LV+ M  +  C+PN VTYN 
Sbjct: 362 VFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNC 421

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI G C    ++ A  L D+M      PN VT  T+++G+ K GR          M+ + 
Sbjct: 422 LIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKG 481

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              N   Y+ LI         E AM+L+ +M+E GC P+ +VY  LI GL + GK D A 
Sbjct: 482 LKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRAS 541

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +L +M   G + +  +++ L+ GF    K  +A E+ K+M       + V Y+ LI   
Sbjct: 542 FVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHF 601

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            + G    A  +  +M+  G  P VV Y ++IH  C  G+++EA+K+F +M     K  P
Sbjct: 602 SKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTS-KVPP 660

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +   YNIL+N+LC+++ +  ++ L++ M  +G  P+  T N     L+EK
Sbjct: 661 NTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEK 710



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 240/490 (48%), Gaps = 9/490 (1%)

Query: 67  DEIFNSTPKLGSYQLGDSTFY--SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           +EI     K   +++  ++ +   LI     SG       VL+ + +   V+   S   +
Sbjct: 252 EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNAL 311

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             A G+A   +    L   M  E   +  V +F  ++N + +      ALE +  +   +
Sbjct: 312 LTALGRAREFKRMNTLLAEM-KEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGE 370

Query: 185 HMNIL--PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR-NCEPDIYTYCTLMDGLCKEN 241
               L  P+ +T+N +I  +C++G  +  + L   M  +  C P+  TY  L+DG CK +
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            ++ A  L D+M  DG  P  VT N L++G+CK+G +  A +  + M  KG   N VTY 
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LI   C   N++KA+ L D M+ + C P+ + Y T+I+GL + G+    + VL  M+E 
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            F  +   ++ LI+G  ++ K ++A ++ K+M   G KP+ V Y+ LI    + G    A
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV-YNEVCYSVLIH 480
             ++ +M+  G      TY +L+  +  +G   +A++I++DM+  + V  N V Y++LI+
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC   ++  A  +   M  +G KP+   +++M  GL     + +A +L + M   E   
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRM--TEHAC 728

Query: 541 QPDVFTYNIL 550
            PD  T  IL
Sbjct: 729 NPDYITMEIL 738



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 173/354 (48%), Gaps = 4/354 (1%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           EE + L   M  +  C     ++N +++   +  +   A E ++ +       + PN +T
Sbjct: 397 EEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQM---NKDGVPPNVVT 453

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N ++  +C+ G ++ A++ F EM  +  + +  TY  L+   C  N +++A+ L DEM 
Sbjct: 454 LNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEML 513

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             GC P  + +  LI+GL + G+L RA+ ++  M   G  P+ V++N LI+G C K  LD
Sbjct: 514 EAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLD 573

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A  +L  M  +   P+ VTY T+I+   K G      R++  M +         Y  LI
Sbjct: 574 EAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALI 633

Query: 375 SGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
                 G  ++AMK+++ M       PNTV+Y+ LI+ LCR  + D A  ++ +M   G 
Sbjct: 634 HAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGV 693

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
             N  T++++ KG  E     KA E+   M ++ C  + +   +L   L   G+
Sbjct: 694 KPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGE 747



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 6/373 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ +LI      G  +    ++ RMR + R +    ++  +   Y KA ++E A  LF  
Sbjct: 382 TYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQ 441

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M ++      V + N++++ + + G  + A+EF+N +   +   +  N +T+  +I+  C
Sbjct: 442 M-NKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEM---QGKGLKGNAVTYTALIRAFC 497

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
            +  ++ A++LF EM    C PD   Y TL+ GL +  +LD A  +L +M+  G  P  V
Sbjct: 498 NVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIV 557

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           +FNVLING C+  +L  A +++  M   G  P+ VTYNTLI      G+   A  L+ +M
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE-RKFHVNEYIYSTLISGLFKEGK 382
           V    +P  VTYG +I+     G   +  ++   M    K   N  IY+ LI+ L ++ +
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQ 677

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A+ L   M  KG KPNT  ++A+  GL       +A E++  M  + C  +  T   
Sbjct: 678 VDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEI 737

Query: 443 LMKGFFESGKGHK 455
           L +     G+  K
Sbjct: 738 LTEWLSAVGETAK 750



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 143/336 (42%), Gaps = 70/336 (20%)

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK---------------------------- 399
           +I + LI  LF++G+ +DA+ L  +M++   +                            
Sbjct: 193 HIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEE 252

Query: 400 ---------------PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
                          PN++  + LI  LCR G+ D A ++L  ++  G    A + ++L+
Sbjct: 253 EIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALL 312

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM---LSR 501
                + +  +   +  +M + +   N V + +LI+ LC+  ++ EA  V+ +M    S 
Sbjct: 313 TALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESN 372

Query: 502 G--CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           G   +PDV+ Y+++I GLC  G  EE L L   M   +P+  P+  TYN L++  CK S 
Sbjct: 373 GFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRS-QPRCMPNTVTYNCLIDGYCKASM 431

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           I  + +L + M   G  P++VT N  +           DG          + K  R +G 
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLV-----------DG----------MCKHGRINGA 470

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +    M  K L     T+  +++  C    I+ A+
Sbjct: 471 VEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAM 506



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 111/236 (47%), Gaps = 5/236 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           +Y+LI   + +G       VL +M+         SF  +   + + + ++EA  +   M 
Sbjct: 524 YYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM- 582

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           +    K    ++N++++   + G +  A      +V      ++P  +T+  +I   C  
Sbjct: 583 ENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKE---GLVPTVVTYGALIHAYCLN 639

Query: 206 GLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           G +D A+++FR+M       P+   Y  L++ LC++N++D A+ L+D+M+V G  P   T
Sbjct: 640 GNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNT 699

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           FN +  GL +   L +A +L+D M    C P+ +T   L   L   G   K  S +
Sbjct: 700 FNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFV 755



 Score = 40.0 bits (92), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 37/202 (18%)

Query: 469 VYNEVCYS--------VLIHGLCEDGKLREARMVWTQMLSRGCK--PDVVAYSSMIHGLC 518
           VYNE+C S        +LI  L   G++ +A  +  +ML    +  P+      +   L 
Sbjct: 181 VYNELCPSRRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALS 240

Query: 519 NAGSVEEALKLFNEMLCLEPK-SQPDVFTYNI----LLNALCKQSNISHSIDLLNSMMDR 573
               V  A+    E++ L  K ++ +VF  +I    L++ LC+      + D+L+ +M  
Sbjct: 241 KRDKVGRAVDE-EEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKL 299

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           G   +  +CN  LTAL                   R FKR  T     ++  M +  + P
Sbjct: 300 GGVMEAASCNALLTALGRA----------------REFKRMNT-----LLAEMKEMDIQP 338

Query: 634 QTSTWERVVQELCRPKRIQAAI 655
              T+  ++  LC+ +R+  A+
Sbjct: 339 NVVTFGILINHLCKFRRVDEAL 360


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 172/607 (28%), Positives = 277/607 (45%), Gaps = 109/607 (17%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRR----EKRVVLEKSFIFIFKAYGK-----AHLV 134
           S F SL+  Y N  D+     +L RM         VV     IFI    G+       L+
Sbjct: 178 SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN---IFIGSICGQEKLPSPDLL 234

Query: 135 EEAIRLFHTMVDEFHC---KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           + A +++  M+   +C   K  V +F   L  +   G + +A +    ++       +P+
Sbjct: 235 DLAEKIYGEMLAA-NCVLNKVNVANFARCLCGV---GKFDKAFQLIKEMMRK---GFVPD 287

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T T++ VI  +C    V+ A  LF+EM +    PD+YTY  L+D  CK   +++A  L +
Sbjct: 288 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 347

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM+  GC PT VT+  LI+   K  ++ +A  +   M   GC PN+VTY  L+ GLC  G
Sbjct: 348 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 407

Query: 312 NLDKAV---------------------------------------------------SLL 320
           N+ KA                                                     LL
Sbjct: 408 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 467

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D M++S C PN + Y  +I+G  K G+      V + M +  +  + + Y++LI  +FK+
Sbjct: 468 DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKD 527

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ + AMK+  QM++  C PN V Y+A+IDGLCR+G+ ++A ++L  M   GC+ N  TY
Sbjct: 528 GRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTY 587

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV------ 494
           ++L+ G  ++GK   +++++  M++  C  N V Y VLI+ LC  G L +AR++      
Sbjct: 588 TALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQ 647

Query: 495 --WTQML-------------------------SRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
             W + L                         S G  P    Y  +I     AG +E A+
Sbjct: 648 TYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 707

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           +L  EM+ +    + D   Y  L+ ALC  S +  +  L + M  RG  P+L   ++F+ 
Sbjct: 708 ELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL---SVFVC 764

Query: 588 ALKEKLE 594
            +K  +E
Sbjct: 765 LIKGLVE 771



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 132/540 (24%), Positives = 242/540 (44%), Gaps = 70/540 (12%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR- 242
           K     P+ +T+N +++ +   G VD   ++ +EM       D +T       LCKE R 
Sbjct: 32  KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRW 91

Query: 243 -------------------------------LDEAVLLLDEMQVDGCFPTPVTFNVLING 271
                                           DEA+  L  M+ + C P  VT+  L++G
Sbjct: 92  ADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
             K  +LG   ++++ M  +GC PN   +N+L+H  C + +   A  LL+RM    C P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFH--------VNEYIYSTLISGLFKEGKA 383
            V Y   I  +   G+    +  L+ + E+ +         +N+   +     L   GK 
Sbjct: 212 YVVYNIFIGSIC--GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A +L K+MM KG  P+T  YS +I  LC   K ++A  +  EM   G   + +TY+ L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +  F ++G   +A  ++++M    C    V Y+ LIH   +  ++ +A  ++ +M+  GC
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--------------PDVFTYNI 549
           +P+ V Y +++ GLC AG++ +A +++ +++     +               P+V TY  
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQD--------- 598
           L++ LCK   + H+ +LL++M+  GC+P+ +  +  +       K+++ Q+         
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 599 ---GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                     L  R+FK  R     K++  ML+   +P   T+  ++  LCR    + A+
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 199/493 (40%), Gaps = 94/493 (19%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +PN +T+  ++    +   +    ++   M    C P+   + +L+   C E     A  
Sbjct: 139 IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYK 198

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKN--------------------------------- 275
           LL+ M   GC P  V +N+ I  +C                                   
Sbjct: 199 LLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN 258

Query: 276 --------GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
                   G+  +A +L+  M  KG +P+  TY+ +I  LC    ++KA  L   M    
Sbjct: 259 FARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG 318

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+  TY  +I+   K G       +   M           Y+ LI    K  +   A 
Sbjct: 319 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 378

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVG------------------------------- 416
            ++ +M++ GC+PN V Y AL+DGLC+ G                               
Sbjct: 379 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 438

Query: 417 --------------------KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
                               K D A E+L  M+++GC  N   Y +L+ GF ++GK   A
Sbjct: 439 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSA 498

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            E++  M K   + +   Y+ LI  + +DG+L  A  V +QML   C P+VV Y++MI G
Sbjct: 499 QEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDG 558

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC  G  E+ALKL + M   E    P+V TY  L++ L K   I  S+DL   M  +GC 
Sbjct: 559 LCRIGESEKALKLLSLM--EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCS 616

Query: 577 PDLVTCNIFLTAL 589
           P+ VT  + +  L
Sbjct: 617 PNYVTYRVLINHL 629


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 139/448 (31%), Positives = 221/448 (49%), Gaps = 31/448 (6%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +IK +C  G   +A ++          PD+  Y  ++ G C   +LD A  L+ +M V+ 
Sbjct: 110 LIKKLCASGRTADARRVLAA-----SGPDVMVYNAMVAGYCGAGQLDAARRLVADMPVE- 163

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P   T+N LI GLC  G    A  ++++MF +GCLP+ VTY  L+   C +    +A+
Sbjct: 164 --PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAM 221

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            LLD M    C P+ VTY  ++NG+ + GR  D    L ++       N   Y+ ++ GL
Sbjct: 222 KLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGL 281

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
           F   + EDA KL ++M  KGC PN V ++ LI  LCR G  + A E+L +M   GC  N+
Sbjct: 282 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNS 341

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            +Y+ L+  F +  K HKA+E  + M    C  + V Y+ L+  LC +G++  A  +  Q
Sbjct: 342 LSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQ 401

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           +  +GC P +++Y+++I GL  AG  +EAL+L +EM       QPD+ TY+ + + LC++
Sbjct: 402 LKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMT--SKGLQPDIITYSTIASGLCRE 459

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
             I  ++     + D G  P     N  L                     + L KR+ T 
Sbjct: 460 DRIEEAVRTFCKVQDMGIRPTAALYNAIL---------------------LGLCKRRETH 498

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQEL 645
               +   M+     P  ST+  +V+ L
Sbjct: 499 NAIDLFAYMISSGCMPNESTYTILVEGL 526



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/389 (30%), Positives = 203/389 (52%), Gaps = 2/389 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M + P+  T+N +I+ +C  G   NA+ +  +M  R C PD+ TY  L++  CK +   +
Sbjct: 160 MPVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQ 219

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ LLDEM   GC P  VT+NV++NG+C+ G +  A + + N+   GC PN V+YN ++ 
Sbjct: 220 AMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLK 279

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GL      + A  L++ M    C PN VT+  +I+ L + G       VL  M +     
Sbjct: 280 GLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTP 339

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y+ L+    K+ K   AM+  + M+ +GC P+ V Y+ L+  LCR G+ D A E+L
Sbjct: 340 NSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELL 399

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            ++ + GC+    +Y++++ G  ++GK  +A+E+  +M       + + YS +  GLC +
Sbjct: 400 HQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCRE 459

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            ++ EA   + ++   G +P    Y++++ GLC       A+ LF  M  +     P+  
Sbjct: 460 DRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYM--ISSGCMPNES 517

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRG 574
           TY IL+  L  +  +  + +L   +  RG
Sbjct: 518 TYTILVEGLAYEGLVKEARELFAQLCSRG 546



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 207/385 (53%), Gaps = 4/385 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI+     G   +   VL  M R   +    ++  + +A  K    ++A++L   M
Sbjct: 168 TYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEM 227

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D+  C   + ++N VLN I QEG    A+EF   + N       PNT+++N+V+K +  
Sbjct: 228 HDK-GCAPDIVTYNVVLNGICQEGRVEDAMEF---LKNLPSYGCEPNTVSYNIVLKGLFT 283

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               ++A +L  EM  + C P++ T+  L+  LC+   ++ A+ +L++M   GC P  ++
Sbjct: 284 AERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLS 343

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++  CK  ++ +A + V+ M  +GC P+ V+YNTL+  LC  G +D A+ LL ++ 
Sbjct: 344 YNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLK 403

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C P  ++Y T+I+GL K G+  +   +L  M  +    +   YST+ SGL +E + E
Sbjct: 404 DKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIE 463

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A++ + ++ + G +P   +Y+A++ GLC+  +   A ++   MI++GC  N  TY+ L+
Sbjct: 464 EAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILV 523

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCV 469
           +G    G   +A E++  +     V
Sbjct: 524 EGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 199/401 (49%), Gaps = 28/401 (6%)

Query: 272 LCKNGELGRAAKLVDNMF-LKGCLPNEV-TYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           L + GEL  A +LVD++  L    P  V     LI  LC  G    A     R V +   
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRTADA-----RRVLAASG 131

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+ + Y  ++ G    G+ +D AR L++  +     + Y Y+TLI GL   G+  +A+ +
Sbjct: 132 PDVMVYNAMVAGYCGAGQ-LDAARRLVA--DMPVEPDAYTYNTLIRGLCGRGRTSNALAV 188

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            + M  +GC P+ V Y+ L++  C+     +A ++L EM + GCA +  TY+ ++ G  +
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G+   A+E  K++    C  N V Y++++ GL    +  +A  +  +M  +GC P+VV 
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVT 308

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           ++ +I  LC  G VE A+++  +M   +    P+  +YN LL+A CKQ  I  +++ +  
Sbjct: 309 FNMLISFLCRRGLVEPAMEVLEQMP--QYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVEL 366

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQ 614
           M+ RGC PD+V+ N  LTAL    E      + L++L  +               L K  
Sbjct: 367 MVSRGCYPDIVSYNTLLTALCRNGEV-DVAIELLHQLKDKGCSPVLISYNTVIDGLTKAG 425

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +T    ++++ M  K L P   T+  +   LCR  RI+ A+
Sbjct: 426 KTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAV 466


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 246/512 (48%), Gaps = 27/512 (5%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
           H     ++ + +A+   +  ++  F  ++      G   +A+Q F  M      P  + Y
Sbjct: 116 HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVY 175

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            T++  L     +  A+ L + M   GC P   T+NVL++GLCK G  G A K+ D M  
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G +PN   Y  L+  LC  G +D+AV LL  M    C+P+EVTY   ++GL K+GR  +
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNE 295

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
             + L+ +++  F +    YS LI GLF+  + ++    +K M+E+   P+ V+Y+ +I 
Sbjct: 296 AFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIR 355

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G    G+ ++A   L  M   G   + F Y++++K   + G   +A  +  +M +NN V 
Sbjct: 356 GCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL 415

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +    +++I GLC+ G + EA  ++ +M   GC P V+ Y+++I G    G +EEA  LF
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475

Query: 531 NEM-----------LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           ++M           L L      D  +   L++ +C+   +  +  LL S++D G  PD+
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVE 624
           VT N  +  L  K            EL ++               L +  R +    + +
Sbjct: 536 VTYNTLINGLC-KARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQ 594

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +LQ   SP  S +  +++ LCR K++  AIN
Sbjct: 595 NILQSGSSPSLSIYNSMMRSLCRMKKLSQAIN 626



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 206/458 (44%), Gaps = 81/458 (17%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P    +N ++K +   G++  A+ L+  M    C P+  TY  LMDGLCK+    +A+ +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            DEM   G  P    + VL++ LC  G++  A +L+ +M  KGCLP+EVTYN  + GLC 
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +++A   L  +           Y  +I+GL +  R  +G     +M ER    +  +
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA---------------------- 407
           Y+ +I G  + G+ EDA+     M +KG  P+T  Y+                       
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 408 -------------LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
                        +I GLC+ G  DEA +I  EM  +GC     TY++L+ GF+  G+  
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 455 KAVEIWKDMAKNN-------------CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +A  ++  M   N              V +      L+H +C+ G++ +A  +   ++  
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--------------------------- 534
           G  PDVV Y+++I+GLC A +++ A++LF E+                            
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 535 ------CLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
                  L+  S P +  YN ++ +LC+   +S +I+L
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 220/500 (44%), Gaps = 87/500 (17%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
             +F  +  A+  A    +A++ F  M DEF  + T   +N++L  ++  G+   AL  Y
Sbjct: 137 SSAFAALVAAHSSAGRHADAVQAFSRM-DEFQSRPTAFVYNTILKALVDSGVILLALALY 195

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           N +V A      PN  T+N+++  +C+ G+  +A+++F EM  R   P++  Y  L+  L
Sbjct: 196 NRMVAA---GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK----LVDNMF---L 290
           C   ++DEAV LL  M+  GC P  VT+N  ++GLCK G +  A +    L D  F   L
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 291 KG--CL--------------------------PNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           KG  CL                          P+ V Y  +I G    G ++ A+S LD 
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M     +P+   Y T++  L   G       +   M +    ++    + +I GL K G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-------------- 428
            ++AM+++ +M E GC P  + Y+ALIDG  R G+ +EA  +  +M              
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 429 ----------------------------------INNGCAANAFTYSSLMKGFFESGKGH 454
                                             I++G   +  TY++L+ G  ++    
Sbjct: 493 GANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            AV ++K++       +E+ Y  LI GL    +  +A M++  +L  G  P +  Y+SM+
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMM 612

Query: 515 HGLCNAGSVEEALKLFNEML 534
             LC    + +A+ L+ + L
Sbjct: 613 RSLCRMKKLSQAINLWLDYL 632



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 195/398 (48%), Gaps = 24/398 (6%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  + +   +A  +E+A+     M  +     T   +N+VL V+   G   RA    + +
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTF-CYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           +     N++ ++ T  ++I  +C+ GLVD A+Q+F EM    C+P + TY  L+DG  +E
Sbjct: 409 LQN---NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYRE 465

Query: 241 NRLDEAVLLLDEMQVDGCFPT--------------PVTFNVLINGLCKNGELGRAAKLVD 286
            RL+EA +L  +M++ G  P+                +   L++ +C++G++ +A KL+ 
Sbjct: 466 GRLEEARMLFHKMEM-GNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLR 524

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
           ++   G +P+ VTYNTLI+GLC   NLD AV L   +      P+E+TYGT+I+GL++  
Sbjct: 525 SIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAH 584

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           R  D   +  ++ +     +  IY++++  L +  K   A+ LW   + K  K N  V S
Sbjct: 585 RENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK--KYNFPVES 642

Query: 407 ALIDGLCRV---GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            ++    +    G  D+    L ++     + ++  Y+  + G  +  +   A+ I+  +
Sbjct: 643 EVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTL 702

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            +        C ++LI+ LC D  L  A  +    LS+
Sbjct: 703 QEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSK 740



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 134/627 (21%), Positives = 259/627 (41%), Gaps = 104/627 (16%)

Query: 29  TIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFS--DEIFNSTPKLGSYQLGDSTF 86
            +   R+    +  SA ++     +    +A + Q FS  DE F S P    Y       
Sbjct: 124 ALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDE-FQSRPTAFVYN------ 176

Query: 87  YSLIQHYANSGDFKSLEMVLY-RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
            ++++   +SG    L + LY RM          ++  +     K  +  +A+++F  M+
Sbjct: 177 -TILKALVDSGVIL-LALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           D       VK +  +L+ +   G    A++    +   K    LP+ +T+N  +  +C++
Sbjct: 235 DR-GIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM---KDKGCLPDEVTYNAFLSGLCKV 290

Query: 206 GLVDNAIQ-----------------------------------LFREMPVRNCEPDIYTY 230
           G V+ A Q                                    ++ M  RN  PD+  Y
Sbjct: 291 GRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLY 350

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             ++ G  +  R+++A+  LD M+  G  P    +N ++  LC +G+L RA  L   M  
Sbjct: 351 TIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQ 410

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
              + +  T   +I GLC +G +D+A+ + D M    C P  +TY  +I+G  + GR ++
Sbjct: 411 NNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGR-LE 469

Query: 351 GARVLMSMEERKFHVNEYIYSTL--------------ISGLFKEGKAEDAMKLWKQMMEK 396
            AR+L    E   + + ++  TL              +  + + G+   A KL + +++ 
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+ V Y+ LI+GLC+    D A  +  E+   G + +  TY +L+ G   + + + A
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR--------------- 501
           + +++++ ++    +   Y+ ++  LC   KL +A  +W   L +               
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAH 649

Query: 502 -----GCKPDVV----------------AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
                G   D V                 Y+  + GLC     ++AL++F+ +       
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDI 709

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLL 567
            P      +L+N LC   N++ ++D++
Sbjct: 710 TPACCA--LLINYLCWDRNLNAAVDIM 734


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 163/599 (27%), Positives = 286/599 (47%), Gaps = 56/599 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL-EKSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+  L++ Y   G  +  E V+  M+    +V+ E ++  +   Y +   +++A R+ + 
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 144 MVDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           M D   H    V  +N+++N + + G   R  E    +   + + + P+  ++N +I   
Sbjct: 350 MRDAGIHVNLFV--YNTMINGLCKLG---RMEEVQKVLQEMEDVGMRPDKYSYNTLIDGY 404

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CR G +  A ++ R M          TY TL+ G C  + +D+A+ L   M   G  P  
Sbjct: 405 CREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNE 464

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           ++ + L++GL K G+  +A  L      +G   N +T+NT+I+GLC  G + +A  LLDR
Sbjct: 465 ISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDR 524

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M   +C P+ +TY T+ +G  KLG+      ++  ME   F  +  ++++ I+G F   +
Sbjct: 525 MKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQ 584

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
                 +  +M  +G  PN V Y ALI G C+ G   EA  + FEM+NNG   N F  S+
Sbjct: 585 WHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSA 644

Query: 443 LMKGFFESGKGHKA--------------------VEIWK------DMAKNNCVYNEVCYS 476
           LM  F++ GK  +A                    +EI K       +A  N     V ++
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWN 704

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           V+I GLC+ G++ +A+ ++  + ++   PD   YSS+IHG   +GS++EA  L + ML  
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVML-- 762

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                P++ TYN L+  LCK   +S +++L N +  +G  P+ +T N  +          
Sbjct: 763 SAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLID--------- 813

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                          K  +T+  FK+ + M+++ + P   T+  ++  LC    ++ AI
Sbjct: 814 ------------EYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAI 860



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 268/577 (46%), Gaps = 49/577 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  + +A+  A  +  A+ +F  M  +  C+ +++S N +LN ++Q G    A   Y  
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGM-GKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  A    +LP+  T  ++ K  CR G V  A++   EM     E ++  Y  +MD  C 
Sbjct: 209 MRIA---GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCG 265

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEV 298
               ++A  +L+ +Q  G  P  VT+ +L+ G CK+G +  A ++V  M   G  + +EV
Sbjct: 266 MGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEV 325

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y  +I+G C +G +D A  + + M  +    N   Y T+INGL KLGR  +  +VL  M
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E+     ++Y Y+TLI G  +EG    A ++ + M+  G    T+ Y+ L+ G C +   
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A  + F M+  G A N  + S+L+ G F++GK  +A+ +WK+        N + ++ +
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCL 536
           I+GLC+ G++ EA  +  +M    C PD + Y ++  G C  G +  A  L N+M  L  
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 537 EPKSQ-------------------------------PDVFTYNILLNALCKQSNISHSID 565
            P  +                               P++ TY  L+   CK+ N+  + +
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD--------GTDFLNELAIRLFKRQRTS 617
           L   M++ G +P++  C+  ++   ++ +  +           D +   +I   +  + S
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS 685

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               +V+ +           W  ++  LC+  RI  A
Sbjct: 686 ---HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 244/524 (46%), Gaps = 42/524 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++ +LI  Y   G  +    +   M R        ++  + K +   H +++A+RL+  M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 145 VDEFHCKRTVK----SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +     KR V     S +++L+ + + G   +AL  +   +      +  N +TFN VI 
Sbjct: 456 L-----KRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLAR---GLAKNVITFNTVIN 507

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C++G +  A +L   M    C PD  TY TL DG CK  +L  A  L+++M+  G  P
Sbjct: 508 GLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAP 567

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +   FN  I G     +  +   +   M  +G  PN VTY  LI G C +GNL +A +L 
Sbjct: 568 SVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLY 627

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM------------------------ 356
             MV +   PN      +++   K G+ VD A +++                        
Sbjct: 628 FEMVNNGMNPNVFICSALMSCFYKEGK-VDEANLVLQKLVNIDMIPGCSISTIEIDKISH 686

Query: 357 ---SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
              ++ +   H    +++ +I GL K G+  DA  L++ +  K   P+   YS+LI G  
Sbjct: 687 VVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCA 746

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
             G  DEA  +   M++ G   N  TY+SL+ G  +SGK  +AV ++  +       N +
Sbjct: 747 ASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGI 806

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y+ LI   C++GK  EA  +  +M+  G +P V+ YS +I+GLC  G +EEA+KL ++M
Sbjct: 807 TYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
             +E    P+  TY  L++   K  N+     L + M  RG  P
Sbjct: 867 --IENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 207/434 (47%), Gaps = 38/434 (8%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + ++F+L+++     G + +A+ +F  M    C P + +   L++ L +      A ++ 
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M++ G  P   T  ++    C++G + +A + V+ M   G   N V Y+ ++   C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTY----------------------------------- 335
           G  + A  +L+ +      PN VTY                                   
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 336 -GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
            G +ING  + GR  D  RV   M +   HVN ++Y+T+I+GL K G+ E+  K+ ++M 
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           + G +P+   Y+ LIDG CR G   +A E+   M+ NG AA   TY++L+KGF       
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A+ +W  M K     NE+  S L+ GL + GK  +A  +W + L+RG   +V+ ++++I
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +GLC  G + EA +L + M   E +  PD  TY  L +  CK   +  +  L+N M   G
Sbjct: 507 NGLCKIGRMAEAEELLDRM--KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 575 CDPDLVTCNIFLTA 588
             P +   N F+T 
Sbjct: 565 FAPSVEMFNSFITG 578



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 201/460 (43%), Gaps = 40/460 (8%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM--QVDGCFP------ 260
           D A+ LFR  P R   P + ++  L+  L +  R  +A  LL  +    +  FP      
Sbjct: 85  DAALHLFRLAPSR---PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVY 141

Query: 261 -----TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
                + V+F++L+      G+L  A  + D M   GC P+  + N L++ L   G+   
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +  +M  +  +P+E T   +     + GR       +  ME     VN   Y  ++ 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CA 434
                G  EDA ++ + +  KG  PN V Y+ L+ G C+ G+ +EAE ++ EM   G   
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +   Y  ++ G+ + G+   A  +  +M       N   Y+ +I+GLC+ G++ E + V
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M   G +PD  +Y+++I G C  GS+ +A ++   M  +         TYN LL   
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM--VRNGLAATTLTYNTLLKGF 439

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           C    I  ++ L   M+ RG  P+ ++C+  L           DG          LFK  
Sbjct: 440 CSLHAIDDALRLWFLMLKRGVAPNEISCSTLL-----------DG----------LFKAG 478

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +T     + +  L + L+    T+  V+  LC+  R+  A
Sbjct: 479 KTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 10/180 (5%)

Query: 85  TFYSLIQHYANSGDFK---SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ SLI   A SG      SL  V+        ++   S I+     GK   +  A+ LF
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGK---LSRAVNLF 793

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           + +  +      + ++N++++   +EG    A +    +V      I P  +T++++I  
Sbjct: 794 NKLQSKGISPNGI-TYNTLIDEYCKEGKTTEAFKLKQKMVEE---GIQPTVITYSILIYG 849

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C  G ++ AI+L  +M   N +P+  TYCTL+ G  K   ++E   L DEM + G  PT
Sbjct: 850 LCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 909


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/443 (30%), Positives = 230/443 (51%), Gaps = 5/443 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA R+F  M  E  C+    +++ +++ + + G    A +    +V        P+T T+
Sbjct: 181 EAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK---GCQPSTRTY 237

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
            ++IK  C +G+ D A+++  EM  + C P+++TY  L+D LC+E +++EA  +  +M  
Sbjct: 238 TVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 297

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P  +TFN LING CK G +  A +L+  M    C PN  TYN L+ GLC      K
Sbjct: 298 HGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYK 357

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  LL R+V +  +P+ VTY  +++G  K G+      +  SM       + + ++ LI 
Sbjct: 358 AFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALID 417

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL K G+ E A  +   M++KG   + V ++ALIDG C++GK  +   +   M+ N C  
Sbjct: 418 GLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLT 477

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
            A T++  +    +  K ++A  +   M K   V + V +++LI G C  G+   +  + 
Sbjct: 478 TAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKML 537

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M   GC P+V  Y+ +I+GLCN G VEEA  +   M        P+ FTY +L+ A  
Sbjct: 538 ERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSF--GVSPNHFTYAVLVKAHV 595

Query: 556 KQSNISHSIDLLNSMMDRGCDPD 578
           K   +  +  ++++M+  GC P+
Sbjct: 596 KAGRLDRAFQIVSTMVKNGCQPN 618



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 211/406 (51%), Gaps = 2/406 (0%)

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           +K  +  PN++T++++I  +C  G ++ A QL +EM  + C+P   TY  L+   C    
Sbjct: 190 SKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGM 249

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            D+A+ +LDEM    C P   T+ +LI+ LC+ G++  A  +   M   G  P  +T+N 
Sbjct: 250 TDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNA 309

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI+G C +G +  A  LL  M    C PN  TY  ++ GL ++ ++     +L  + +  
Sbjct: 310 LINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNG 369

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              +   Y+ L+ G  KEG+   A  ++  M   G +P+   ++ALIDGLC++G+ ++A 
Sbjct: 370 LLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQAN 429

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            IL  M+  G + +  T+++L+ G  + GK      ++++M +N C+     ++  +  L
Sbjct: 430 GILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDAL 489

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            +D KL EA  +  +M+  G  P VV ++ +I G C AG    +LK+   M   +    P
Sbjct: 490 GKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK--QAGCSP 547

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +V+TY I++N LC    +  +  +L SM   G  P+  T  + + A
Sbjct: 548 NVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 593



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 145/547 (26%), Positives = 257/547 (46%), Gaps = 44/547 (8%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +F    K  S +    T+  LI     +G  +    +   M  +      +++  + KA 
Sbjct: 185 VFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 244

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
               + ++A+++   M  +  C   V ++  +++ + +EG    A   +  ++  KH  +
Sbjct: 245 CDIGMTDKAMKMLDEMATK-ACVPNVHTYTILIDRLCREGKIEEANGVFRKML--KH-GL 300

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P  +TFN +I   C+ G V +A QL   M   NC+P+I TY  LM+GLC+ ++  +A L
Sbjct: 301 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 360

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LL  +  +G  P  VT+N+L++G CK G+L  A  + ++M   G  P+  T+  LI GLC
Sbjct: 361 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLC 420

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G L++A  +L  MV      +EVT+  +I+G  K+G+A D   +  +M E +     +
Sbjct: 421 KLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAH 480

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++  +  L K+ K  +A  +  +MM+ G  P+ V ++ LI+G CR G+   + ++L  M
Sbjct: 481 TFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERM 540

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              GC+ N +TY+ ++ G   +G+  +A  I   M+      N   Y+VL+    + G+L
Sbjct: 541 KQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRL 600

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHG------------LCNAG--------------- 521
             A  + + M+  GC+P+   YS+++ G            L + G               
Sbjct: 601 DRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNN 660

Query: 522 ----------SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
                      V+ ALK+ +E   ++    P    YN L+  LCK+  I  +  L   M+
Sbjct: 661 CLSSHVFRLMDVDHALKIRDE---IKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMV 717

Query: 572 DRGCDPD 578
             G  PD
Sbjct: 718 KHGLFPD 724



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 228/483 (47%), Gaps = 27/483 (5%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A   Y  +VN      +   + +  V+  +C+ G V  A     ++       D +   +
Sbjct: 112 AFLVYRRMVNE---GFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTS 168

Query: 233 LMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           L+   C+ + L EA  + ++M + + C P  VT+++LI+GLC+ G L  A +L   M  K
Sbjct: 169 LVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 228

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           GC P+  TY  LI   C  G  DKA+ +LD M    C+PN  TY  +I+ L + G+  + 
Sbjct: 229 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             V   M +         ++ LI+G  KEG    A +L   M +  CKPN   Y+ L++G
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 348

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LCRV K  +A  +L  +++NG   +  TY+ L+ GF + G+ + A  I+  M       +
Sbjct: 349 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 408

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              ++ LI GLC+ G+L +A  +   M+ +G   D V ++++I G C  G  ++   LF 
Sbjct: 409 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFE 468

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            M+  E +      T+N  L+AL K   ++ +  +L  MM  G  P +VT  I +     
Sbjct: 469 NMV--ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI----- 521

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                 +G     E A+ L          K++E M Q   SP   T+  ++  LC   R+
Sbjct: 522 ------EGHCRAGETALSL----------KMLERMKQAGCSPNVYTYTIIINGLCNNGRV 565

Query: 652 QAA 654
           + A
Sbjct: 566 EEA 568



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 211/434 (48%), Gaps = 6/434 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           + +V+N + + G    A  F   ++    +    +T     ++   CR   +  A ++F 
Sbjct: 131 YRTVVNALCKNGFVQAAEMFCCKVL---RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 187

Query: 217 EMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           +M    +C P+  TY  L+ GLC+  RL+EA  L  EM   GC P+  T+ VLI   C  
Sbjct: 188 KMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 247

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G   +A K++D M  K C+PN  TY  LI  LC +G +++A  +  +M+     P  +T+
Sbjct: 248 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 307

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +ING  K G  V   ++L  ME+     N   Y+ L+ GL +  K+  A  L +++++
Sbjct: 308 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 367

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G  P+ V Y+ L+DG C+ G+ + A  I   M + G   + FT+++L+ G  + G+  +
Sbjct: 368 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 427

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A  I   M K     +EV ++ LI G C+ GK ++   ++  M+   C      ++  + 
Sbjct: 428 ANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLD 487

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            L     + EA  +  +M+  +    P V T+ IL+   C+    + S+ +L  M   GC
Sbjct: 488 ALGKDYKLNEANAMLGKMM--KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 545

Query: 576 DPDLVTCNIFLTAL 589
            P++ T  I +  L
Sbjct: 546 SPNVYTYTIIINGL 559



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 237/523 (45%), Gaps = 43/523 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI      G  +    V  +M +        +F  +   Y K   V  A +L   M
Sbjct: 271 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 330

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++ +CK  ++++N ++  + +    ++A      +V+     +LP+ +T+N+++   C+
Sbjct: 331 -EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDN---GLLPDRVTYNILVDGFCK 386

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A  +F  M     EPD +T+  L+DGLCK  RL++A  +L  M   G     VT
Sbjct: 387 EGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVT 446

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           F  LI+G CK G+      L +NM    CL    T+N  +  L     L++A ++L +M+
Sbjct: 447 FTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMM 506

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+ VT+  +I G  + G      ++L  M++     N Y Y+ +I+GL   G+ E
Sbjct: 507 KYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVE 566

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A  +   M   G  PN   Y+ L+    + G+ D A +I+  M+ NGC  N+  YS+L+
Sbjct: 567 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALL 626

Query: 445 KGFFESGK--GHKAVEIWKDMA---------KNNCVYNEV-------------------- 473
            GF  S    G +A+    D+           NNC+ + V                    
Sbjct: 627 SGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG 686

Query: 474 -----CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
                 Y+ L+ GLC++G++ EA  +   M+  G  PD  A SS+I   C     +  L+
Sbjct: 687 VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLE 745

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
                L L+ K  P   +Y  +++ L  +  +  +  L++ ++
Sbjct: 746 FMK--LVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLV 786



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 166/361 (45%), Gaps = 38/361 (10%)

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y TL+  L K N    A L+   M  +G     + +  ++N LCKNG +  A      + 
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVL 155

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLGRA 348
             G   +     +L+   C + +L +A  + ++M   + C PN VTY             
Sbjct: 156 RLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTY------------- 202

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                                 S LI GL + G+ E+A +L ++M+EKGC+P+T  Y+ L
Sbjct: 203 ----------------------SILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVL 240

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I   C +G  D+A ++L EM    C  N  TY+ L+      GK  +A  +++ M K+  
Sbjct: 241 IKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGL 300

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
               + ++ LI+G C++G +  A  + + M    CKP++  Y+ ++ GLC      +A  
Sbjct: 301 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 360

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L   ++  +    PD  TYNIL++  CK+  ++ + ++ NSM   G +PD  T    +  
Sbjct: 361 LLRRVV--DNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDG 418

Query: 589 L 589
           L
Sbjct: 419 L 419



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 135/326 (41%), Gaps = 58/326 (17%)

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           NG+VKL  A+DG      M E  F ++   YSTL+  L K      A  ++++M+ +G  
Sbjct: 72  NGVVKLMGALDG------MTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFV 125

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
              + Y  +++ LC+ G    AE               F    L  GF            
Sbjct: 126 LGGIDYRTVVNALCKNGFVQAAE--------------MFCCKVLRLGFG----------- 160

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML-SRGCKPDVVAYSSMIHGLC 518
                    +   VC S+++   C    L EA  V+ +M     C+P+ V YS +IHGLC
Sbjct: 161 ---------LDTHVCTSLVLAN-CRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLC 210

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
            AG +EEA +L  EM  +E   QP   TY +L+ A C       ++ +L+ M  + C P+
Sbjct: 211 EAGRLEEAFQLKQEM--VEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPN 268

Query: 579 LVTCNIFLTAL--KEKLEAPQD------------GTDFLNELAIRLFKRQRTSGGFKIVE 624
           + T  I +  L  + K+E                G    N L     K       F+++ 
Sbjct: 269 VHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLS 328

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKR 650
           VM +    P   T+  +++ LCR  +
Sbjct: 329 VMEKGNCKPNIRTYNELMEGLCRVSK 354



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 84/375 (22%), Positives = 144/375 (38%), Gaps = 72/375 (19%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           ++ I  S  K G   L + TF +LI  +   G  K +  +   M   + +    +F    
Sbjct: 428 ANGILGSMVKKG-ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFL 486

Query: 126 KAYGKAHLVEEAIRLF--------------HTMVDEFHC---------------KRTVKS 156
            A GK + + EA  +               HT++ E HC               K+   S
Sbjct: 487 DALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCS 546

Query: 157 FNSVLNVIIQEGLYH--RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
            N     II  GL +  R  E    + +     + PN  T+ +++K   + G +D A Q+
Sbjct: 547 PNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQI 606

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENR-------------------------------- 242
              M    C+P+ + Y  L+ G    N                                 
Sbjct: 607 VSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHV 666

Query: 243 -----LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
                +D A+ + DE++  G  PT   +N L+ GLCK G +  A +L  +M   G  P++
Sbjct: 667 FRLMDVDHALKIRDEIKKCG-VPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK 725

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
              +++I   C     D  +  +  ++ +K +P+  +Y  +I+GL   GR V  A+ L+S
Sbjct: 726 AI-SSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGR-VQEAQKLVS 783

Query: 358 MEERKFHVNEYIYST 372
              R   + E +  T
Sbjct: 784 DLVRHTGIEEEVEVT 798



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 125/268 (46%), Gaps = 20/268 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I    N+G  +  E +L+ M          ++  + KA+ KA  ++ A ++  TM
Sbjct: 551 TYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 610

Query: 145 VDEFHCKRTVKSFNSVLN--VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           V    C+     ++++L+  V+    +  RAL     + +A+ ++   N    N +   V
Sbjct: 611 VKN-GCQPNSHIYSALLSGFVLSNTAIGARALSSTGDL-DARSLSSEEND--NNCLSSHV 666

Query: 203 CRLGLVDNAIQLFREMPVRNC---EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
            RL  VD+A+++  E  ++ C     D+Y +  L+ GLCKE R+ EA  L  +M   G F
Sbjct: 667 FRLMDVDHALKIRDE--IKKCGVPTEDLYNF--LVVGLCKEGRIIEADQLTQDMVKHGLF 722

Query: 260 PTPVTFNVLIN--GLCKNGELGRAAKLV-DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           P     +++ +    CK        KLV DN F+    P+  +Y  +IHGL  +G + +A
Sbjct: 723 PDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFV----PSFASYCWVIHGLRNEGRVQEA 778

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVK 344
             L+  +V    +  EV     I  L+K
Sbjct: 779 QKLVSDLVRHTGIEEEVEVTPSIEFLMK 806


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 234/432 (54%), Gaps = 12/432 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V S N  L+++ +      AL  +    NA     +PN  T+ ++I+     G +D AIQ
Sbjct: 22  VFSCNCALDMLCRLNRRQEALALFR---NAMARICMPNKFTYGILIRGFSSAGDLDIAIQ 78

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L  EM     E +   + TLM GLC   R+ EA+     M  D C P  +T+  L++ LC
Sbjct: 79  LLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALC 137

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G+   A  ++  M  +GC P+ VT++TLI GLC  G+ ++A  +L+ ++      ++ 
Sbjct: 138 KAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDA 197

Query: 334 TYGTIINGLVKLGRAVD-GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            + TII  L     +V+  ++VL  +  + F     +++ +I+G  K    + A KL + 
Sbjct: 198 AFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEV 257

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+EKGC PN   ++ LI GLC+  +  EA+++L +M+  GC+ N  TYS+++ G  + G+
Sbjct: 258 MIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQ 317

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A E+++ M + NC  N V +++LI GLC+  ++ EAR ++ +M   GC PD++ Y+S
Sbjct: 318 VDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNS 377

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPK---SQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           +I GLC +  V+EA +LF  +    P+   S  +  TY+ L +       ++ +  + + 
Sbjct: 378 LIDGLCKSFQVDEAFQLFQTI----PESGVSAANAVTYSTLFHGYAALGRMADACRIFSM 433

Query: 570 MMDRGCDPDLVT 581
           ++D+G  PDL T
Sbjct: 434 LVDKGFSPDLAT 445



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/600 (27%), Positives = 279/600 (46%), Gaps = 69/600 (11%)

Query: 114 RVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL-- 169
           R+ +   F +  + + +  A  ++ AI+L   M      K +    N+V++  + +GL  
Sbjct: 51  RICMPNKFTYGILIRGFSSAGDLDIAIQLLEEM------KSSGFEGNAVVHTTLMKGLCD 104

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
             R +E   H   A   +  P+ +T+  ++  +C+ G  D A  + REM  + C PD  T
Sbjct: 105 AGRVVEALEHF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVT 163

Query: 230 YCTLMDGLCKENRLDEAVLLLDEM------QVDGCF------------------------ 259
           + TL+DGLCK    ++A  +L+++        D  F                        
Sbjct: 164 FSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVV 223

Query: 260 ------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 PT + FN++ING CK  +L  A KL++ M  KGC+PN  T+  LI GLC    +
Sbjct: 224 IAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRV 283

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  LL++MV   C PN VTY T+INGL K G+  D   +   ME R    N   ++ L
Sbjct: 284 GEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNIL 343

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I GL K  + E+A +L+ +M E GC P+ + Y++LIDGLC+  + DEA ++   +  +G 
Sbjct: 344 IDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGV 403

Query: 434 -AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
            AANA TYS+L  G+   G+   A  I+  +       +   Y+ LI   C+  +  E  
Sbjct: 404 SAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVV 463

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M S+G  P V   S+++ GL      E A++LF+ M         D   YN+++ 
Sbjct: 464 ELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM--AARGCTDDALIYNLVVE 521

Query: 553 ALCKQSNISHSIDLLNSMM---DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            + + S    ++ +L  ++   DR  +P     +  + +L + +    D    L++++ R
Sbjct: 522 GMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ-VGKTDDAKQLLHKMSER 580

Query: 610 LF---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            F               + QR     ++ E M+    +P+ ST   V+  LC   ++  A
Sbjct: 581 GFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDA 640



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 148/548 (27%), Positives = 264/548 (48%), Gaps = 58/548 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+     +G F   + +L  M  +       +F  +     K    E+A R+   +
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI-VNAKHMNIL------PNTLTFNL 197
           +     +R + + ++    IIQ     R    YN + + +K + ++      P  L FNL
Sbjct: 188 I-----QRGMGNSDAAFETIIQ-----RLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 237

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           VI   C+   +D+A +L   M  + C P+++T+  L+ GLCK NR+ EA  LL++M + G
Sbjct: 238 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGG 297

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C P  VT++ +INGLCK G++  A +L   M  + C PN VT+N LI GLC    +++A 
Sbjct: 298 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 357

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV-NEYIYSTLISG 376
            L  RM  + C P+ +TY ++I+GL K  +  +  ++  ++ E      N   YSTL  G
Sbjct: 358 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 417

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
               G+  DA +++  +++KG  P+   Y++LI   C+  +  E  E++ EM + G    
Sbjct: 418 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 477

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG--------------- 481
             T S+++ G FE     +A++++  MA   C  + + Y++++ G               
Sbjct: 478 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLE 537

Query: 482 -----------------------LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
                                  LC+ GK  +A+ +  +M  RG    V +Y+ ++ GL 
Sbjct: 538 QVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLS 597

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
                +EA ++F  M+   P   P++ T N++++ LC  + +  + +L+  M   GC PD
Sbjct: 598 RLQRWDEATQVFEAMVSAGPA--PEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 655

Query: 579 LVTCNIFL 586
           + TCN  +
Sbjct: 656 IETCNTLI 663



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 249/518 (48%), Gaps = 32/518 (6%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI-------FIFKAYGKAHLVE 135
           D+ F ++IQ   N   + S+E+      +   VV+ K F         +   + KA  ++
Sbjct: 196 DAAFETIIQRLCNK--YNSVELA----SKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLD 249

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
            A +L   M+++  C   V +F  ++  + +      A +    +V        PN +T+
Sbjct: 250 SAYKLLEVMIEK-GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMG---GCSPNVVTY 305

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           + VI  +C+ G VD+A +LF+ M  RNC P++ T+  L+DGLCK  R++EA  L   M+ 
Sbjct: 306 STVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE 365

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-LPNEVTYNTLIHGLCLKGNLD 314
            GC P  +T+N LI+GLCK+ ++  A +L   +   G    N VTY+TL HG    G + 
Sbjct: 366 TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMA 425

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A  +   +V     P+  TY ++I    K  RAV+   ++  M  + F       S ++
Sbjct: 426 DACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVL 485

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            GLF+    E A++L+  M  +GC  + ++Y+ +++G+ R  K D+A  +L ++I+    
Sbjct: 486 GGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDK--R 543

Query: 435 ANAFTYSS-----LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
              F  SS     L++   + GK   A ++   M++         Y+ L+ GL    +  
Sbjct: 544 DRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWD 603

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  V+  M+S G  P++   + +I  LC+A  V++A +L   M  L     PD+ T N 
Sbjct: 604 EATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKL--GCCPDIETCNT 661

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDP-----DLVTC 582
           L+   CK      +  LL  M + G +P     DL+ C
Sbjct: 662 LIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 699



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 208/436 (47%), Gaps = 54/436 (12%)

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N  ++ LC+      A  L  N   + C+PN+ TY  LI G    G+LD A+ LL+ M +
Sbjct: 26  NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           S    N V + T++ GL   GR V+      +M  +    +   Y+ L+  L K GK ++
Sbjct: 86  SGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDE 144

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA----------- 434
           A  + ++M+ +GC P+TV +S LIDGLC+ G  ++A  +L ++I  G             
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQ 204

Query: 435 --------------------ANAFTYSSLM-----KGFFESGKGHKAVEIWKDMAKNNCV 469
                               A  FT + LM      GF ++     A ++ + M +  CV
Sbjct: 205 RLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV 264

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N   +++LI GLC+  ++ EA+ +  +M+  GC P+VV YS++I+GLC  G V++A +L
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYEL 324

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F  M        P+V T+NIL++ LCK   I  +  L + M + GC PD++T N  +  L
Sbjct: 325 FQLM--ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGL 382

Query: 590 KEKLEA----------PQDGTDFLNELAIR-LFKR----QRTSGGFKIVEVMLQKFLSPQ 634
            +  +           P+ G    N +    LF       R +   +I  +++ K  SP 
Sbjct: 383 CKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPD 442

Query: 635 TSTWERVVQELCRPKR 650
            +T+  ++ E C+  R
Sbjct: 443 LATYTSLILEYCKTSR 458



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 160/322 (49%), Gaps = 51/322 (15%)

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + ++A+ L++  M + C PN   Y  LI G    G  D A ++L EM ++G   NA  ++
Sbjct: 37  RRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHT 96

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +LMKG  ++G+  +A+E ++ MAK +C  + + Y+ L+H LC+ GK  EA+ +  +M+++
Sbjct: 97  TLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQ 155

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------LC-----LEP 538
           GC PD V +S++I GLC  GS E+A ++  ++                  LC     +E 
Sbjct: 156 GCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVEL 215

Query: 539 KSQ-----------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            S+           P V  +N+++N  CK  ++  +  LL  M+++GC P++ T  I +T
Sbjct: 216 ASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILIT 275

Query: 588 ALKEKLEAPQDGTDFLNELAI---------------RLFKRQRTSGGFKIVEVMLQKFLS 632
            L  K     +    L ++ +                L K+ +    +++ ++M ++   
Sbjct: 276 GLC-KANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCP 334

Query: 633 PQTSTWERVVQELCRPKRIQAA 654
           P   T   ++  LC+ KRI+ A
Sbjct: 335 PNVVTHNILIDGLCKAKRIEEA 356


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 258/507 (50%), Gaps = 46/507 (9%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           ++F  +  +Y +A  +  A+++  TM+ +   +  +   N+ ++V++      +AL F  
Sbjct: 172 EAFAHVMVSYSRAGKLRNAMQVL-TMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLE 230

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +   + + I PN +T+N +IK  C L  V++A++L  EMP + C PD  +Y T+M  LC
Sbjct: 231 RM---QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLC 287

Query: 239 KENRLDEAVLLLDEMQVDG-CFPTPVTFNVLI---------------------------- 269
           ++ R+ E   L+++M  D   FP  VT+N L+                            
Sbjct: 288 QDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDK 347

Query: 270 -------NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
                  N  C  G + RA ++V+ M  KGC P+ VTY  +++GLC  G +++A  +L +
Sbjct: 348 VGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQ 407

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C PN V+Y  ++NGL + G +++   ++ + EE  +  N   YS ++ GL +EGK
Sbjct: 408 MYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGK 467

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             +A  + ++M+ KG  P  V  + LI  LC   K +EA++ + E +N GCA NA  +++
Sbjct: 468 LSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTT 527

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ GF +S     A+ +  DM  NN   + V ++ +I  L + G++ EA +   +ML +G
Sbjct: 528 VIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKG 587

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT-YNILLNALCKQSNIS 561
             P  V Y ++IH  C  G VEE +KL  +ML     S+    T YN ++  LC   N  
Sbjct: 588 LDPTPVTYRAVIHQYCKMGRVEELIKLLGKML-----SRSKCRTAYNQVIEKLCNFGNPE 642

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            +  ++  ++      D  TC++ + +
Sbjct: 643 AADKVVGLVLRTASRIDANTCHMLMES 669



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 132/463 (28%), Positives = 218/463 (47%), Gaps = 59/463 (12%)

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
            +  +M    +  +L  A+ +L  MQ  G  P  +  N  I+ L    +L +A + ++ M
Sbjct: 173 AFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERM 232

Query: 289 FLKGCLPNEVTYNTLIHGLC----------------LKGNLDKAVS-------------- 318
            L G  PN VTYN LI G C                 KG     VS              
Sbjct: 233 QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRI 292

Query: 319 -----LLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
                L+++MV  +K  P++VTY T+++ L K G A +    L   EER F V++  YS 
Sbjct: 293 KEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSA 352

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +++    +G+ + A ++  +M+ KGC P+ V Y+A+++GLC+VGK +EA+++L +M  +G
Sbjct: 353 IVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHG 412

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C  N  +Y++L+ G  + G   +A E+     ++    N + YSV++HGL  +GKL EA 
Sbjct: 413 CKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEAC 472

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            V  +ML++G  P  V  + +I  LC    + EA K   E  CL      +   +  +++
Sbjct: 473 DVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEE--CLNRGCAVNAVNFTTVIH 530

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             C+  NI  ++ LL+ M      PD VT    + AL +K          + E  +   K
Sbjct: 531 GFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKK--------GRIEEATVYTMK 582

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                        ML+K L P   T+  V+ + C+  R++  I
Sbjct: 583 -------------MLKKGLDPTPVTYRAVIHQYCKMGRVEELI 612



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 207/463 (44%), Gaps = 51/463 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRV----VLEKSFIFIFKAYGKAHLVEEAIRL 140
           ++Y+++         K +  ++ +M ++ ++    V   + + +   +G A    E +R 
Sbjct: 278 SYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLR- 336

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
             T    F   +    +++++N    +G   RA E  N ++        P+ +T+  V+ 
Sbjct: 337 -ETEERGFQVDKV--GYSAIVNSFCMQGRMDRAKEIVNEMITK---GCSPDVVTYTAVVN 390

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC---------------------- 238
            +C++G V+ A ++ ++M    C+P+  +Y  L++GLC                      
Sbjct: 391 GLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTP 450

Query: 239 -------------KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
                        +E +L EA  ++ EM   G FPTPV  N+LI  LC   ++  A K +
Sbjct: 451 NAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFM 510

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
           +    +GC  N V + T+IHG C   N+D A+SLLD M  +   P+ VT+  II+ L K 
Sbjct: 511 EECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKK 570

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVV 404
           GR  +     M M ++        Y  +I    K G+ E+ +KL  +M+ +  C+     
Sbjct: 571 GRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCR---TA 627

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ +I+ LC  G P+ A++++  ++      +A T   LM+ +   G    A ++   M 
Sbjct: 628 YNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMF 687

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG-CKPD 506
             N + +      L   L  +GKL EA  +  Q + RG   PD
Sbjct: 688 DRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNISPD 730



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 65/293 (22%), Positives = 123/293 (41%), Gaps = 22/293 (7%)

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
           ++  +  +Y  ++  L K    + A ++ + M+ +G       ++ ++    R GK   A
Sbjct: 131 RYRHDPIVYYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNA 190

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            ++L  M   G   N    ++ +     + K  KA+   + M       N V Y+ LI G
Sbjct: 191 MQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKG 250

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C+  ++  A  +  +M  +GC PD V+Y +++  LC    ++E   L  +M+  + K  
Sbjct: 251 YCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMV-KDNKLF 309

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PD  TYN L++ L K  +   +++ L    +RG   D V  +  + +             
Sbjct: 310 PDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNS------------- 356

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      + R     +IV  M+ K  SP   T+  VV  LC+  +++ A
Sbjct: 357 --------FCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEA 401


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/518 (29%), Positives = 252/518 (48%), Gaps = 10/518 (1%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           Y    S    +I     S  F S  ++ Y    E      + +  I  AY ++  ++ +I
Sbjct: 55  YSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSI 114

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
             F+ MVD+     +   FN++L  ++    +++   F+N       + ++ +  +F +V
Sbjct: 115 YYFNEMVDKGFVPGS-NCFNNLLTFVVGSSSFNQWWCFFNE----SKIKVVLDVYSFGIV 169

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           IK  C  G ++ +  L  E+      P++  Y TL+DG CK+  +++A  L  EM   G 
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL 229

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
                T+ VLI+GL KNG   +  ++ + M   G  PN  TYN +++ LC  G    A  
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFK 289

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           + D M       N VTY T+I GL +  +A +  +V+  M+    + N   Y+TLI G  
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFC 349

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
             GK   A+ L + +  +G  P+ V Y+ L+ G CR G    A +++ EM   G   +  
Sbjct: 350 SVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TY+ L+  F  S     A+++   M +   V +   YSVLIHG C  G++ EA  ++  M
Sbjct: 410 TYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           + +  +P+ V Y++MI G C  GS   AL+LF +M   E +  P+V +Y+ L+  LCK+ 
Sbjct: 470 VEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDM--EEKELAPNVASYSYLIRVLCKER 527

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
            +  + DL+  M+D G DP    CN+   A   K ++P
Sbjct: 528 KLKEAEDLVEKMIDSGIDPSDTICNLISRA---KTDSP 562



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 222/461 (48%), Gaps = 8/461 (1%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           L H + +    K   + +  ++N  +Q      ++ ++N +V+      +P +  FN ++
Sbjct: 80  LLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDK---GFVPGSNCFNNLL 136

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             V      +     F E  ++    D+Y++  ++ G C+   ++++  LL E++  G  
Sbjct: 137 TFVVGSSSFNQWWCFFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFS 195

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  V +  LI+G CK GE+ +A  L   M   G + NE TY  LIHGL   G   +   +
Sbjct: 196 PNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            ++M      PN  TY  ++N L K GR  D  +V   M ER    N   Y+TLI GL +
Sbjct: 256 YEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           E KA +A K+  QM      PN + Y+ LIDG C VGK  +A  +  ++ + G + +  T
Sbjct: 316 EMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVT 375

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ L+ GF   G    A ++ K+M +     ++V Y++LI        +  A  + + M 
Sbjct: 376 YNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME 435

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G  PDV  YS +IHG C  G + EA +LF  M+  E   +P+   YN ++   CK+ +
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV--EKMLEPNEVIYNTMILGYCKEGS 493

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQD 598
              ++ L   M ++   P++ + +  +  L  + KL+  +D
Sbjct: 494 SYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAED 534



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 231/460 (50%), Gaps = 24/460 (5%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           + ++I    +   +D++I  F EM  +   P    +  L+  +   +  ++     +E +
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           +        +F ++I G C+ GE+ ++  L+  +   G  PN V Y TLI G C KG ++
Sbjct: 157 IKVVLDV-YSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA  L   M     + NE TY  +I+GL K G    G  +   M+E     N Y Y+ ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           + L K+G+ +DA K++ +M E+G   N V Y+ LI GLCR  K +EA +++ +M +    
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  TY++L+ GF   GK  KA+ + +D+       + V Y+VL+ G C  G    A  +
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M  RG KP  V Y+ +I     + ++E A++L + M   E    PDV TY++L++  
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME--ELGLVPDVHTYSVLIHGF 453

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           C +  ++ +  L  SM+++  +P+ V  N  +      L   ++G+ +    A+RLF+  
Sbjct: 454 CIKGQMNEASRLFKSMVEKMLEPNEVIYNTMI------LGYCKEGSSYR---ALRLFRD- 503

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      M +K L+P  +++  +++ LC+ ++++ A
Sbjct: 504 -----------MEEKELAPNVASYSYLIRVLCKERKLKEA 532



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/359 (25%), Positives = 175/359 (48%), Gaps = 30/359 (8%)

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y  +I+      +LD ++   + MV    +P    +  ++  +V    + +      +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVG-SSSFNQWWCFFNES 155

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           + K  ++ Y +  +I G  + G+ E +  L  ++ E G  PN V+Y+ LIDG C+ G+ +
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A+++ FEM   G  AN +TY+ L+ G F++G   +  E+++ M ++    N   Y+ ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           + LC+DG+ ++A  V+ +M  RG   ++V Y+++I GLC      EA K+ ++M     K
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM-----K 330

Query: 540 S---QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
           S    P++ TYN L++  C    +  ++ L   +  RG  P LVT N+ ++    K +  
Sbjct: 331 SYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGD-- 388

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                              TSG  K+V+ M ++ + P   T+  ++    R   ++ AI
Sbjct: 389 -------------------TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAI 428



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/291 (19%), Positives = 134/291 (46%), Gaps = 26/291 (8%)

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE-ILFE 427
           +Y  +I+   +    + ++  + +M++KG  P +  ++ L+  +  VG     +    F 
Sbjct: 96  LYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFV--VGSSSFNQWWCFFN 153

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
                   + +++  ++KG  E+G+  K+ ++  ++ +     N V Y+ LI G C+ G+
Sbjct: 154 ESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGE 213

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + +A+ ++ +M   G   +   Y+ +IHGL   G  ++  +++ +M   E    P+++TY
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQ--EHGVFPNLYTY 271

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           N ++N LCK      +  + + M +RG   ++VT N  +  L  +++A +          
Sbjct: 272 NCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEAN-------- 323

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
                        K+++ M    ++P   T+  ++   C   ++  A++ C
Sbjct: 324 -------------KVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLC 361


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 248/515 (48%), Gaps = 33/515 (6%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
           H     ++ + +A+   +  ++  F  ++      G   +A+Q F  M      P  + Y
Sbjct: 116 HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVY 175

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            T++  L     +  A+ L + M   GC P   T+NVL++GLCK G  G A K+ D M  
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G +PN   Y  L+  LC  G +D+AV LL  M    C+P+EVTY   ++GL K+GR  +
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNE 295

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
             + L+ +++  F +    YS LI GLF+  + ++    +K M+E+   P+ V+Y+ +I 
Sbjct: 296 AFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIR 355

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G    G+ ++A   L  M   G   + F Y++++K   + G   +A  +  +M +NN V 
Sbjct: 356 GCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL 415

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +    +++I GLC+ G + EA  ++ +M   GC P V+ Y+++I G    G +EEA  LF
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475

Query: 531 NEMLCLEPKSQPDVF--------------TYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           ++M   E  + P +F              +   L++ +C+   +  +  LL S++D G  
Sbjct: 476 HKM---EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVV 532

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFK 621
           PD+VT N  +  L  K            EL ++               L +  R +    
Sbjct: 533 PDVVTYNTLINGLC-KARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           + + +LQ   SP  S +  +++ LCR K++  AIN
Sbjct: 592 LFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAIN 626



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 212/458 (46%), Gaps = 81/458 (17%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P    +N ++K +   G++  A+ L+  M    C P+  TY  LMDGLCK+    +A+ +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            DEM   G  P    + VL++ LC  G++  A +L+ +M  KGCLP+EVTYN  + GLC 
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +++A   L  +           Y  +I+GL +  R  +G     +M ER    +  +
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY------------------------ 405
           Y+ +I G  + G+ EDA+     M +KG  P+T  Y                        
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 406 -----------SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
                      + +I GLC+ G  DEA +I  EM  +GC     TY++L+ GF+  G+  
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 455 KAVEIWK--DMAKNNCVY-------NEVCYS----VLIHGLCEDGKLREARMVWTQMLSR 501
           +A  ++   +M  N  ++       N+VC S     L+H +C+ G++ +A  +   ++  
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--------------------------- 534
           G  PDVV Y+++I+GLC A +++ A++LF E+                            
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 535 ------CLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
                  L+  S P +  YN ++ +LC+   +S +I+L
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 220/500 (44%), Gaps = 87/500 (17%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
             +F  +  A+  A    +A++ F  M DEF  + T   +N++L  ++  G+   AL  Y
Sbjct: 137 SSAFAALVAAHSSAGRHADAVQAFSRM-DEFQSRPTAFVYNTILKALVDSGVILLALALY 195

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           N +V A      PN  T+N+++  +C+ G+  +A+++F EM  R   P++  Y  L+  L
Sbjct: 196 NRMVAA---GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK----LVDNMF---L 290
           C   ++DEAV LL  M+  GC P  VT+N  ++GLCK G +  A +    L D  F   L
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 291 KG--CL--------------------------PNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           KG  CL                          P+ V Y  +I G    G ++ A+S LD 
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M     +P+   Y T++  L   G       +   M +    ++    + +I GL K G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-------------- 428
            ++AM+++ +M E GC P  + Y+ALIDG  R G+ +EA  +  +M              
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 429 ----------------------------------INNGCAANAFTYSSLMKGFFESGKGH 454
                                             I++G   +  TY++L+ G  ++    
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            AV ++K++       +E+ Y  LI GL    +  +A M++  +L  G  P +  Y+SM+
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMM 612

Query: 515 HGLCNAGSVEEALKLFNEML 534
             LC    + +A+ L+ + L
Sbjct: 613 RSLCRMKKLSQAINLWLDYL 632



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 134/627 (21%), Positives = 259/627 (41%), Gaps = 104/627 (16%)

Query: 29  TIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFS--DEIFNSTPKLGSYQLGDSTF 86
            +   R+    +  SA ++     +    +A + Q FS  DE F S P    Y       
Sbjct: 124 ALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDE-FQSRPTAFVYN------ 176

Query: 87  YSLIQHYANSGDFKSLEMVLY-RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
            ++++   +SG    L + LY RM          ++  +     K  +  +A+++F  M+
Sbjct: 177 -TILKALVDSGVIL-LALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           D       VK +  +L+ +   G    A++    +   K    LP+ +T+N  +  +C++
Sbjct: 235 DR-GIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM---KDKGCLPDEVTYNAFLSGLCKV 290

Query: 206 GLVDNAIQ-----------------------------------LFREMPVRNCEPDIYTY 230
           G V+ A Q                                    ++ M  RN  PD+  Y
Sbjct: 291 GRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLY 350

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             ++ G  +  R+++A+  LD M+  G  P    +N ++  LC +G+L RA  L   M  
Sbjct: 351 TIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQ 410

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
              + +  T   +I GLC +G +D+A+ + D M    C P  +TY  +I+G  + GR ++
Sbjct: 411 NNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGR-LE 469

Query: 351 GARVLMSMEERKFHVNEYIYSTL--------------ISGLFKEGKAEDAMKLWKQMMEK 396
            AR+L    E   + + ++  TL              +  + + G+   A KL + +++ 
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+ V Y+ LI+GLC+    D A  +  E+   G + +  TY +L+ G   + + + A
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR--------------- 501
           + +++++ ++    +   Y+ ++  LC   KL +A  +W   L +               
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAH 649

Query: 502 -----GCKPDVV----------------AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
                G   D V                 Y+  + GLC     ++AL++F+ +       
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDI 709

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLL 567
            P      +L+N LC   N++ ++D++
Sbjct: 710 TPACCA--LLINYLCWDRNLNAAVDIM 734



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 194/398 (48%), Gaps = 24/398 (6%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  + +   +A  +E+A+     M  +     T   +N+VL V+   G   RA    + +
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTF-CYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           +     N++ ++ T  ++I  +C+ GLVD A+Q+F EM    C+P + TY  L+DG  +E
Sbjct: 409 LQN---NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYRE 465

Query: 241 NRLDEAVLLLDEMQVDGCFPT--------------PVTFNVLINGLCKNGELGRAAKLVD 286
            RL+EA +L  +M++ G  P+                +   L++ +C++G++ +A KL+ 
Sbjct: 466 GRLEEARMLFHKMEM-GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLR 524

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
           ++   G +P+ VTYNTLI+GLC   NLD AV L   +      P+E+TYGT+I+GL++  
Sbjct: 525 SIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAH 584

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           R  D   +  ++ +     +  IY++++  L +  K   A+ LW   + K  K N  V S
Sbjct: 585 RENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK--KYNFPVES 642

Query: 407 ALIDGLCRV---GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            ++    +    G  D+    L ++       ++  Y+  + G  +  +   A+ I+  +
Sbjct: 643 EVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTL 702

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            +        C ++LI+ LC D  L  A  +    LS+
Sbjct: 703 QEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSK 740


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 263/535 (49%), Gaps = 20/535 (3%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+  F+ M+   H   +   FN +L  I +   Y       N +       I P+  
Sbjct: 48  LDDALSSFNRML-HMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM---DSFGIPPDVY 103

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I + C L     A  +  ++     +PD  T+ TL+ GLC E ++ +A+ L D+M
Sbjct: 104 TLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKM 163

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  LINGLCK G    A +L+ +M    C P+ V Y ++I  LC    +
Sbjct: 164 IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 223

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +L  +MV     P+  TY ++I+ L  L        +L  M   K   +  I+ST+
Sbjct: 224 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 283

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEGK  +A  +   M+ +G +PN V Y+AL+DG C   + DEA ++   M++NG 
Sbjct: 284 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 343

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A N  +Y++L+ G+ +  +  KA  ++++M +   + N V Y+ L+HGLC  G+L++A  
Sbjct: 344 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIA 403

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M++ G  PD+  Y  ++  LC    ++EA+ L   +        PD+  Y I+++ 
Sbjct: 404 LFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTI--EGSNMDPDIQIYTIVIDG 461

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--------KEKLEAPQDGTD---- 601
           +C+   +  + D+ +++  +G  P++ T  I +  L          KL    DG      
Sbjct: 462 MCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPD 521

Query: 602 --FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               N +   L + +      ++++ ML +  S   ST   +V+ LC  K  Q+ 
Sbjct: 522 GCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSV 576



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 236/497 (47%), Gaps = 51/497 (10%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D+A+  F  M   +  P    +  L+  + K  +      L ++M   G  P   T N+
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LIN  C     G A  ++  +   G  P+  T+ TLI GLC++G +  A+ L D+M+   
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN VTYGT+INGL K+G      R+L SME+     +  +Y+++I  L K+ +  +A 
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 388 KLWKQMMEKGCK-----------------------------------PNTVVYSALIDGL 412
            L+ +M+ +G                                     P+ V++S ++D L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ GK  EA +++  MI  G   N  TY++LM G     +  +AV+++  M  N    N 
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           + Y+ LI+G C+  ++ +A  ++ +M  +   P+ V Y++++HGLC+ G +++A+ LF+E
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHE 407

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--K 590
           M+       PD+ TY ILL+ LCK+S++  ++ LL ++     DPD+    I +  +   
Sbjct: 408 MVA--HGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 465

Query: 591 EKLEAPQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
            +LEA +D    L+   +R            L +R       K+   M     SP   T+
Sbjct: 466 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 525

Query: 639 ERVVQELCRPKRIQAAI 655
             + Q L + K    AI
Sbjct: 526 NTITQGLLQNKEALRAI 542



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 218/455 (47%), Gaps = 5/455 (1%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           F+  +     KLG  Q   +TF +LI+     G       +  +M  E       ++  +
Sbjct: 120 FAFSVLAKILKLG-LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTL 178

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
                K      AIRL  +M ++ +C+  V  + S+++ + ++     A   ++ +V   
Sbjct: 179 INGLCKVGNTNAAIRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ- 236

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              I P+  T+  +I ++C L    +   L  +M      PD+  + T++D LCKE ++ 
Sbjct: 237 --GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 294

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  ++D M + G  P  VT+N L++G C   E+  A K+ D M   G  PN ++YNTLI
Sbjct: 295 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 354

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +G C    +DKA  L + M   + +PN VTY T+++GL  +GR  D   +   M      
Sbjct: 355 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI 414

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y  L+  L K+   ++AM L K +      P+  +Y+ +IDG+CR G+ + A +I
Sbjct: 415 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              + + G   N  TY+ ++ G    G   +A +++ +M  N C  +   Y+ +  GL +
Sbjct: 475 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 534

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           + +   A  +  +ML+RG   DV   + ++  LC+
Sbjct: 535 NKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 569



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 163/348 (46%), Gaps = 10/348 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI    N  ++K +  +L +M   K +     F  +  A  K   + EA    H +
Sbjct: 244 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA----HDV 299

Query: 145 VDEF---HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           VD       +  V ++N++++    +     A++ ++ +V   H    PN +++N +I  
Sbjct: 300 VDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMV---HNGYAPNVISYNTLING 356

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C++  +D A  LF EM  +   P+  TY TLM GLC   RL +A+ L  EM   G  P 
Sbjct: 357 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPD 416

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             T+ +L++ LCK   L  A  L+  +      P+   Y  +I G+C  G L+ A  +  
Sbjct: 417 LATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFS 476

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            + +    PN  TY  +INGL + G   +  ++ M M+      +   Y+T+  GL +  
Sbjct: 477 NLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNK 536

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +A  A++L ++M+ +G   +    + L++ LC        ++IL E +
Sbjct: 537 EALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 584


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 172/607 (28%), Positives = 277/607 (45%), Gaps = 109/607 (17%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRR----EKRVVLEKSFIFIFKAYGK-----AHLV 134
           S F SL+  Y N  D+     +L RM         VV     IFI    G+       L+
Sbjct: 178 SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN---IFIGSICGQEKLPSPDLL 234

Query: 135 EEAIRLFHTMVDEFHC---KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           + A +++  M+   +C   K  V +F   L  +   G + +A +    ++       +P+
Sbjct: 235 DLAEKIYGEMLAA-NCVLNKVNVANFARCLCGV---GKFDKAFQLIKEMMRK---GFVPD 287

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T T++ VI  +C    V+ A  LF+EM +    PD+YTY  L+D  CK   +++A  L +
Sbjct: 288 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 347

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM+  GC PT VT+  LI+   K  ++ +A  +   M   GC PN+VTY  L+ GLC  G
Sbjct: 348 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 407

Query: 312 NLDKAV---------------------------------------------------SLL 320
           N+ KA                                                     LL
Sbjct: 408 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 467

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D M++S C PN + Y  +I+G  K G+      V + M +  +  + + Y++LI  +FK+
Sbjct: 468 DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKD 527

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ + AMK+  QM++  C PN V Y+A+IDGLCR+G+ ++A ++L  M   GC+ N  TY
Sbjct: 528 GRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTY 587

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV------ 494
           ++L+ G  ++GK   +++++  M++  C  N V Y VLI+ LC  G L +AR++      
Sbjct: 588 TALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQ 647

Query: 495 --WTQML-------------------------SRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
             W + L                         S G  P    Y  +I     AG +E A+
Sbjct: 648 TYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 707

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           +L  EM+ +    + D   Y  L+ ALC  S +  +  L + M  RG  P+L   ++F+ 
Sbjct: 708 ELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL---SVFVC 764

Query: 588 ALKEKLE 594
            +K  +E
Sbjct: 765 LIKGLVE 771



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/540 (24%), Positives = 242/540 (44%), Gaps = 70/540 (12%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR- 242
           K     P+ +T+N +++ +   G VD   ++ +EM       D +T       LCKE R 
Sbjct: 32  KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRW 91

Query: 243 -------------------------------LDEAVLLLDEMQVDGCFPTPVTFNVLING 271
                                           DEA+  L  M+ + C P  VT+  L++G
Sbjct: 92  ADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
             K  +LG   ++++ M  +GC PN   +N+L+H  C + +   A  LL+RM    C P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFH--------VNEYIYSTLISGLFKEGKA 383
            V Y   I  +   G+    +  L+ + E+ +         +N+   +     L   GK 
Sbjct: 212 YVVYNIFIGSIC--GQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A +L K+MM KG  P+T  YS +I  LC   K ++A  +  EM   G   + +TY+ L
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +  F ++G   +A  ++++M    C    V Y+ LIH   +  ++ +A  ++ +M+  GC
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--------------PDVFTYNI 549
           +P+ V Y +++ GLC AG++ +A +++ +++     +               P+V TY  
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQD--------- 598
           L++ LCK   + H+ +LL++M+  GC+P+ +  +  +       K+++ Q+         
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 599 ---GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                     L  R+FK  R     K++  ML+   +P   T+  ++  LCR    + A+
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/522 (24%), Positives = 213/522 (40%), Gaps = 97/522 (18%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +++ +++   +  A+ F + +   +  + +PN +T+  ++    +   +    ++   M 
Sbjct: 113 MISGLMEASYFDEAMSFLHRM---RCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMM 169

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN---- 275
              C P+   + +L+   C E     A  LL+ M   GC P  V +N+ I  +C      
Sbjct: 170 TEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLP 229

Query: 276 -------------------------------------GELGRAAKLVDNMFLKGCLPNEV 298
                                                G+  +A +L+  M  KG +P+  
Sbjct: 230 SPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTS 289

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY+ +I  LC    ++KA  L   M      P+  TY  +I+   K G       +   M
Sbjct: 290 TYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEM 349

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG-- 416
                      Y+ LI    K  +   A  ++ +M++ GC+PN V Y AL+DGLC+ G  
Sbjct: 350 RSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNI 409

Query: 417 -------------------------------------------------KPDEAEEILFE 427
                                                            K D A E+L  
Sbjct: 410 SKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDA 469

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M+++GC  N   Y +L+ GF ++GK   A E++  M K   + +   Y+ LI  + +DG+
Sbjct: 470 MLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGR 529

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           L  A  V +QML   C P+VV Y++MI GLC  G  E+ALKL + M   E    P+V TY
Sbjct: 530 LDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM--EEKGCSPNVVTY 587

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             L++ L K   I  S+DL   M  +GC P+ VT  + +  L
Sbjct: 588 TALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 157/338 (46%), Gaps = 39/338 (11%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KAH V+ A  L   M+    C+     ++++++   + G    A E +  +    +   L
Sbjct: 456 KAHKVDHAHELLDAMLSS-GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY---L 511

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  T+  +I  + + G +D A+++  +M   +C P++ TY  ++DGLC+    ++A+ L
Sbjct: 512 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 571

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M+  GC P  VT+  LI+GL K G++  +  L   M  KGC PN VTY  LI+ LC 
Sbjct: 572 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 631

Query: 310 KGNLDKA---------------------------------VSLLDRMVASKCMPNEVTYG 336
            G LDKA                                 + +L+ M +   +P    YG
Sbjct: 632 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYG 691

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
            +I+   K GR      +   M E    V  +  +Y++LI  L    + E+A +L+ +M 
Sbjct: 692 MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 751

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
            +G  P   V+  LI GL  V K DEA ++ + + + G
Sbjct: 752 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 224/410 (54%), Gaps = 2/410 (0%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V+      +P+ +T+N +I+ +C+  +   A+   R M  + C PD +TY T++DG CK
Sbjct: 244 LVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 303

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            + + EA  LL +    G  P  VT+  LINGLC  G++ RA +L +    KG  P+ V 
Sbjct: 304 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 363

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN+L+ GLCL+G +  A+ +++ M    C P+  TY  +INGL K+G   D   V+    
Sbjct: 364 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 423

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            + +  + + ++TLI G  K  K + A++L ++M E G  P+T+ Y+++++GLC+ GK +
Sbjct: 424 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 483

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           E  E   EMI  GC  N  TY+ L++ F  S K  +A ++   M++     + V ++ LI
Sbjct: 484 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 543

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +G C +G L  A +++ ++  +G       ++++I       ++  A K+F+EM  L   
Sbjct: 544 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEM--LSKG 601

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            + D +TY +L++  CK +N+  +   L  M+ +G  P + T    + +L
Sbjct: 602 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 651



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 156/571 (27%), Positives = 273/571 (47%), Gaps = 33/571 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMR-REKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
            + +LI+  A++G   +++  +   R R     +   ++   +AY +A  + +A+  F  
Sbjct: 17  AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 76

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D F C     ++N++++ ++    + +A + Y  ++ A    + P+  T  + +++ C
Sbjct: 77  M-DLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAA---GVSPDLHTHTIRLRSFC 132

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
                  A++L R +P R        YCT++ GL       +A  L D+M     FP   
Sbjct: 133 LTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLA 188

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            FN +++ LCK G++  A  L+  +  +G   N  TYN  I GLC  G L +AV L+D M
Sbjct: 189 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 248

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            A   +P+ VTY T+I GL K     +    L  M  +    +++ Y+T+I G  K    
Sbjct: 249 RA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 307

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A +L K  + KG  P+ V Y +LI+GLC  G  + A E+  E    G   +   Y+SL
Sbjct: 308 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 367

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +KG    G    A+++  +MA+  C  +   Y+++I+GLC+ G + +A +V    + +G 
Sbjct: 368 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 427

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PDV  ++++I G C    ++ AL+L   M   E    PD  TYN +LN LCK   ++  
Sbjct: 428 LPDVFTFNTLIDGYCKRLKLDSALQLVERM--WEYGIAPDTITYNSVLNGLCKAGKVNEV 485

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
            +    M+ +GC P+ +T NI +                  E   R  K +  S   K++
Sbjct: 486 NETFQEMILKGCHPNPITYNILI------------------ENFCRSNKMEEAS---KVI 524

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M Q+ L P   ++  ++   CR   ++ A
Sbjct: 525 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 555



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 245/468 (52%), Gaps = 9/468 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +A  + EA+RL   M    +    V ++N+++  + ++ +   A+ +   ++N      L
Sbjct: 234 EAGRLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN---QGCL 288

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  T+N +I   C++ +V  A +L ++   +   PD  TYC+L++GLC E  ++ A+ L
Sbjct: 289 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 348

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            +E Q  G  P  V +N L+ GLC  G +  A ++++ M  +GC P+  TYN +I+GLC 
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 408

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            GN+  A  +++  +    +P+  T+ T+I+G  K  +     +++  M E     +   
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 468

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+++++GL K GK  +  + +++M+ KGC PN + Y+ LI+  CR  K +EA +++ +M 
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 528

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +A ++++L+ GF  +G    A  +++ + +         ++ LI        + 
Sbjct: 529 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 588

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  ++ +MLS+G + D   Y  +I G C   +V+ A     EM  ++    P + T+  
Sbjct: 589 MAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEM--IKKGFIPSMSTFGR 646

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
           ++N+L     +  ++ +++ M+  G  P++V  +  L A K+++ AP+
Sbjct: 647 VINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNADKKEIAAPK 692


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 248/515 (48%), Gaps = 33/515 (6%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
           H     ++ + +A+   +  ++  F  ++      G   +A+Q F  M      P  + Y
Sbjct: 116 HADEAMFDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVY 175

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            T++  L     +  A+ L + M   GC P   T+NVL++GLCK G  G A K+ D M  
Sbjct: 176 NTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLD 235

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G +PN   Y  L+  LC  G +D+AV LL  M    C+P+EVTY   ++GL K+GR  +
Sbjct: 236 RGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNE 295

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
             + L+ +++  F +    YS LI GLF+  + ++    +K M+E+   P+ V+Y+ +I 
Sbjct: 296 AFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIR 355

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G    G+ ++A   L  M   G   + F Y++++K   + G   +A  +  +M +NN V 
Sbjct: 356 GCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVL 415

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +    +++I GLC+ G + EA  ++ +M   GC P V+ Y+++I G    G +EEA  LF
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475

Query: 531 NEMLCLEPKSQPDVF--------------TYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           ++M   E  + P +F              +   L++ +C+   +  +  LL S++D G  
Sbjct: 476 HKM---EMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVV 532

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFK 621
           PD+VT N  +  L  K            EL ++               L +  R +    
Sbjct: 533 PDVVTYNTLINGLC-KARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMM 591

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           + + +LQ   SP  S +  +++ LCR K++  AIN
Sbjct: 592 LFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAIN 626



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 212/458 (46%), Gaps = 81/458 (17%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P    +N ++K +   G++  A+ L+  M    C P+  TY  LMDGLCK+    +A+ +
Sbjct: 170 PTAFVYNTILKALVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKM 229

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            DEM   G  P    + VL++ LC  G++  A +L+ +M  KGCLP+EVTYN  + GLC 
Sbjct: 230 FDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCK 289

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +++A   L  +           Y  +I+GL +  R  +G     +M ER    +  +
Sbjct: 290 VGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVL 349

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA---------------------- 407
           Y+ +I G  + G+ EDA+     M +KG  P+T  Y+                       
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEML 409

Query: 408 -------------LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
                        +I GLC+ G  DEA +I  EM  +GC     TY++L+ GF+  G+  
Sbjct: 410 QNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLE 469

Query: 455 KAVEIWK--DMAKNNCVY-------NEVCYS----VLIHGLCEDGKLREARMVWTQMLSR 501
           +A  ++   +M  N  ++       N+VC S     L+H +C+ G++ +A  +   ++  
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--------------------------- 534
           G  PDVV Y+++I+GLC A +++ A++LF E+                            
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 535 ------CLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
                  L+  S P +  YN ++ +LC+   +S +I+L
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINL 627



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 220/500 (44%), Gaps = 87/500 (17%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
             +F  +  A+  A    +A++ F  M DEF  + T   +N++L  ++  G+   AL  Y
Sbjct: 137 SSAFAALVAAHSSAGRNADAVQAFSRM-DEFQSRPTAFVYNTILKALVDSGVILLALALY 195

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           N +V A      PN  T+N+++  +C+ G+  +A+++F EM  R   P++  Y  L+  L
Sbjct: 196 NRMVAA---GCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSL 252

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK----LVDNMF---L 290
           C   ++DEAV LL  M+  GC P  VT+N  ++GLCK G +  A +    L D  F   L
Sbjct: 253 CNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGL 312

Query: 291 KG--CL--------------------------PNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           KG  CL                          P+ V Y  +I G    G ++ A+S LD 
Sbjct: 313 KGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDV 372

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M     +P+   Y T++  L   G       +   M +    ++    + +I GL K G 
Sbjct: 373 MKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGL 432

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-------------- 428
            ++AM+++ +M E GC P  + Y+ALIDG  R G+ +EA  +  +M              
Sbjct: 433 VDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTL 492

Query: 429 ----------------------------------INNGCAANAFTYSSLMKGFFESGKGH 454
                                             I++G   +  TY++L+ G  ++    
Sbjct: 493 GANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLD 552

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            AV ++K++       +E+ Y  LI GL    +  +A M++  +L  G  P +  Y+SM+
Sbjct: 553 GAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMM 612

Query: 515 HGLCNAGSVEEALKLFNEML 534
             LC    + +A+ L+ + L
Sbjct: 613 RSLCRMKKLSQAINLWLDYL 632



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 135/627 (21%), Positives = 259/627 (41%), Gaps = 104/627 (16%)

Query: 29  TIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFS--DEIFNSTPKLGSYQLGDSTF 86
            +   R+    +  SA ++     +    NA + Q FS  DE F S P    Y       
Sbjct: 124 ALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDE-FQSRPTAFVYN------ 176

Query: 87  YSLIQHYANSGDFKSLEMVLY-RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
            ++++   +SG    L + LY RM          ++  +     K  +  +A+++F  M+
Sbjct: 177 -TILKALVDSGVIL-LALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEML 234

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           D       VK +  +L+ +   G    A++    +   K    LP+ +T+N  +  +C++
Sbjct: 235 DR-GIMPNVKIYTVLLSSLCNAGKIDEAVQLLGSM---KDKGCLPDEVTYNAFLSGLCKV 290

Query: 206 GLVDNAIQ-----------------------------------LFREMPVRNCEPDIYTY 230
           G V+ A Q                                    ++ M  RN  PD+  Y
Sbjct: 291 GRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLY 350

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             ++ G  +  R+++A+  LD M+  G  P    +N ++  LC +G+L RA  L   M  
Sbjct: 351 TIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQ 410

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
              + +  T   +I GLC +G +D+A+ + D M    C P  +TY  +I+G  + GR ++
Sbjct: 411 NNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGR-LE 469

Query: 351 GARVLMSMEERKFHVNEYIYSTL--------------ISGLFKEGKAEDAMKLWKQMMEK 396
            AR+L    E   + + ++  TL              +  + + G+   A KL + +++ 
Sbjct: 470 EARMLFHKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDS 529

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+ V Y+ LI+GLC+    D A  +  E+   G + +  TY +L+ G   + + + A
Sbjct: 530 GVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDA 589

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR--------------- 501
           + +++++ ++    +   Y+ ++  LC   KL +A  +W   L +               
Sbjct: 590 MMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAH 649

Query: 502 -----GCKPDVV----------------AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
                G   D V                 Y+  + GLC     ++AL++F+ +       
Sbjct: 650 KEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDI 709

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLL 567
            P      +L+N LC   N++ ++D++
Sbjct: 710 TPACCA--LLINYLCWDRNLNAAVDIM 734



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 194/398 (48%), Gaps = 24/398 (6%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  + +   +A  +E+A+     M  +     T   +N+VL V+   G   RA    + +
Sbjct: 350 YTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTF-CYNTVLKVLCDHGDLERAHTLRSEM 408

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           +     N++ ++ T  ++I  +C+ GLVD A+Q+F EM    C+P + TY  L+DG  +E
Sbjct: 409 LQN---NLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYRE 465

Query: 241 NRLDEAVLLLDEMQVDGCFPT--------------PVTFNVLINGLCKNGELGRAAKLVD 286
            RL+EA +L  +M++ G  P+                +   L++ +C++G++ +A KL+ 
Sbjct: 466 GRLEEARMLFHKMEM-GNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLR 524

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
           ++   G +P+ VTYNTLI+GLC   NLD AV L   +      P+E+TYGT+I+GL++  
Sbjct: 525 SIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAH 584

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           R  D   +  ++ +     +  IY++++  L +  K   A+ LW   + K  K N  V S
Sbjct: 585 RENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPK--KYNFPVES 642

Query: 407 ALIDGLCRV---GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            ++    +    G  D+    L ++       ++  Y+  + G  +  +   A+ I+  +
Sbjct: 643 EVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSNPYTIWLIGLCQVRRTDDALRIFHTL 702

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            +        C ++LI+ LC D  L  A  +    LS+
Sbjct: 703 QEFGIDITPACCALLINYLCWDRNLNAAVDIMLYALSK 740


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 243/459 (52%), Gaps = 13/459 (2%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ LF  MV E     ++  F  +LNVI +   +   +   +H+   + M +  +  T 
Sbjct: 55  EALDLFTHMV-ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL---QIMGVSHDLYTC 110

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           NL++   C+      A     +M     EPDI T+ +L++G C  NR++EA+ ++++M  
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P  V +  +I+ LCKNG +  A  L D M   G  P+ V Y +L++GLC  G    
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A SLL  M   K  P+ +T+  +I+  VK G+ +D   +   M       N + Y++LI+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G   EG  ++A +++  M  KGC P+ V Y++LI+G C+  K D+A +I +EM   G   
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  TY++L++GF + GK + A E++  M       N   Y+VL+H LC +GK+++A M++
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410

Query: 496 TQMLSR---GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL- 551
             M  R   G  P++  Y+ ++HGLC  G +E+AL +F +M     K + D+      + 
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM----RKREMDIGIITYTII 466

Query: 552 -NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              +CK   + ++++L  S+  +G  P++VT    ++ L
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/418 (31%), Positives = 219/418 (52%), Gaps = 8/418 (1%)

Query: 164 IIQEGL----YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           I++ GL    ++ AL+ + H+V ++    LP+ + F  ++  + ++   D  I L   + 
Sbjct: 43  ILRNGLHSLQFNEALDLFTHMVESRP---LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
           +     D+YT   LM+  C+ ++   A   L +M   G  P  VTF  LING C    + 
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  +V+ M   G  P+ V Y T+I  LC  G+++ A+SL D+M      P+ V Y +++
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           NGL   GR  D   +L  M +RK   +   ++ LI    KEGK  DA +L+ +M+     
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN   Y++LI+G C  G  DEA ++ + M   GC  +   Y+SL+ GF +  K   A++I
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           + +M++     N + Y+ LI G  + GK   A+ V++ M+SRG  P++  Y+ ++H LC 
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399

Query: 520 AGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            G V++AL +F +M   E     P+++TYN+LL+ LC    +  ++ +   M  R  D
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/383 (31%), Positives = 199/383 (51%), Gaps = 6/383 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + +F S++N          A+   N +V    M I P+ + +  +I ++C+ G V+ A+ 
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMV---EMGIKPDVVMYTTIIDSLCKNGHVNYALS 198

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           LF +M      PD+  Y +L++GLC   R  +A  LL  M      P  +TFN LI+   
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G+   A +L + M      PN  TY +LI+G C++G +D+A  +   M    C P+ V
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            Y ++ING  K  +  D  ++   M ++    N   Y+TLI G  + GK   A +++  M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN---NGCAANAFTYSSLMKGFFES 450
           + +G  PN   Y+ L+  LC  GK  +A  I  +M     +G A N +TY+ L+ G   +
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           GK  KA+ +++DM K       + Y+++I G+C+ GK++ A  ++  + S+G KP+VV Y
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498

Query: 511 SSMIHGLCNAGSVEEALKLFNEM 533
           ++MI GL   G   EA  LF +M
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKM 521



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 151/287 (52%), Gaps = 6/287 (2%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K  V +FN++++  ++EG +  A E YN ++    M+I PN  T+  +I   C  G VD 
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMI---RMSIAPNIFTYTSLINGFCMEGCVDE 300

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A Q+F  M  + C PD+  Y +L++G CK  ++D+A+ +  EM   G     +T+  LI 
Sbjct: 301 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK--- 327
           G  + G+   A ++  +M  +G  PN  TYN L+H LC  G + KA+ + + M   +   
Sbjct: 361 GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG 420

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN  TY  +++GL   G+      V   M +R+  +    Y+ +I G+ K GK ++A+
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            L+  +  KG KPN V Y+ +I GL R G   EA  +  +M  +G +
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 197/414 (47%), Gaps = 15/414 (3%)

Query: 60  KSEQPF-SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFK-SLEMV--LYRMRREKRV 115
           +S QP+ +        KLG ++    TF SLI  +      + ++ MV  +  M  +  V
Sbjct: 119 QSSQPYLASSFLGKMMKLG-FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV 177

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           V+   +  I  +  K   V  A+ LF  M + +  +  V  + S++N +   G +  A  
Sbjct: 178 VM---YTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
               +   K   I P+ +TFN +I    + G   +A +L+ EM   +  P+I+TY +L++
Sbjct: 234 LLRGMTKRK---IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           G C E  +DEA  +   M+  GCFP  V +  LING CK  ++  A K+   M  KG   
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N +TY TLI G    G  + A  +   MV+    PN  TY  +++ L   G+      + 
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410

Query: 356 MSMEERKFH---VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
             M++R+      N + Y+ L+ GL   GK E A+ +++ M ++      + Y+ +I G+
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           C+ GK   A  +   + + G   N  TY++++ G F  G  H+A  +++ M ++
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 224/410 (54%), Gaps = 2/410 (0%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V+      +P+ +T+N +I+ +C+  +   A+   R M  + C PD +TY T++DG CK
Sbjct: 243 LVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 302

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            + + EA  LL +    G  P  VT+  LINGLC  G++ RA +L +    KG  P+ V 
Sbjct: 303 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 362

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN+L+ GLCL+G +  A+ +++ M    C P+  TY  +INGL K+G   D   V+    
Sbjct: 363 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 422

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            + +  + + ++TLI G  K  K + A++L ++M E G  P+T+ Y+++++GLC+ GK +
Sbjct: 423 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 482

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           E  E   EMI  GC  N  TY+ L++ F  S K  +A ++   M++     + V ++ LI
Sbjct: 483 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 542

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +G C +G L  A +++ ++  +G       ++++I       ++  A K+F+EM  L   
Sbjct: 543 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEM--LSKG 600

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            + D +TY +L++  CK +N+  +   L  M+ +G  P + T    + +L
Sbjct: 601 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSL 650



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 156/571 (27%), Positives = 273/571 (47%), Gaps = 33/571 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMR-REKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
            + +LI+  A++G   +++  +   R R     +   ++   +AY +A  + +A+  F  
Sbjct: 16  AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 75

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D F C     ++N++++ ++    + +A + Y  ++ A    + P+  T  + +++ C
Sbjct: 76  M-DLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAA---GVSPDLHTHTIRLRSFC 131

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
                  A++L R +P R        YCT++ GL       +A  L D+M     FP   
Sbjct: 132 LTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLA 187

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            FN +++ LCK G++  A  L+  +  +G   N  TYN  I GLC  G L +AV L+D M
Sbjct: 188 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 247

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            A   +P+ VTY T+I GL K     +    L  M  +    +++ Y+T+I G  K    
Sbjct: 248 RA-YAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 306

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A +L K  + KG  P+ V Y +LI+GLC  G  + A E+  E    G   +   Y+SL
Sbjct: 307 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 366

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +KG    G    A+++  +MA+  C  +   Y+++I+GLC+ G + +A +V    + +G 
Sbjct: 367 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 426

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PDV  ++++I G C    ++ AL+L   M   E    PD  TYN +LN LCK   ++  
Sbjct: 427 LPDVFTFNTLIDGYCKRLKLDSALQLVERM--WEYGIAPDTITYNSVLNGLCKAGKVNEV 484

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
            +    M+ +GC P+ +T NI +                  E   R  K +  S   K++
Sbjct: 485 NETFQEMILKGCHPNPITYNILI------------------ENFCRSNKMEEAS---KVI 523

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M Q+ L P   ++  ++   CR   ++ A
Sbjct: 524 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 554



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 245/468 (52%), Gaps = 9/468 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +A  + EA+RL   M    +    V ++N+++  + ++ +   A+ +   ++N      L
Sbjct: 233 EAGRLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN---QGCL 287

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  T+N +I   C++ +V  A +L ++   +   PD  TYC+L++GLC E  ++ A+ L
Sbjct: 288 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 347

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            +E Q  G  P  V +N L+ GLC  G +  A ++++ M  +GC P+  TYN +I+GLC 
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 407

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            GN+  A  +++  +    +P+  T+ T+I+G  K  +     +++  M E     +   
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 467

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+++++GL K GK  +  + +++M+ KGC PN + Y+ LI+  CR  K +EA +++ +M 
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 527

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +A ++++L+ GF  +G    A  +++ + +         ++ LI        + 
Sbjct: 528 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 587

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  ++ +MLS+G + D   Y  +I G C   +V+ A     EM  ++    P + T+  
Sbjct: 588 MAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEM--IKKGFIPSMSTFGR 645

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
           ++N+L     +  ++ +++ M+  G  P++V  +  L A K+++ AP+
Sbjct: 646 VINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNADKKEIAAPK 691


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 249/467 (53%), Gaps = 8/467 (1%)

Query: 114 RVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
           R+ ++ S +F  + +   +    +EA + F+ M+ E      +++ N +L++ ++     
Sbjct: 173 RLSVKSSIVFDLLVRVCCELRRADEAFKCFY-MMKEKGIVPKIETCNDMLSLFLKLNRME 231

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            A   Y  +     + I     TFN+++  +C+ G +  A +    M     +P++ +Y 
Sbjct: 232 MAWVLYAEMF---RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 288

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           T++ G      ++ A  +LD M+V G  P   T+  LI+G+CK G L  A+ L D M   
Sbjct: 289 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 348

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G +PN VTYNTLI G C KG+L++A S  D MV    MP+  TY  +++ L   GR  + 
Sbjct: 349 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 408

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             ++  M ++    +   Y+ LI+G  + G A+ A  L  +M+ KG +P  V Y++LI  
Sbjct: 409 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 468

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L R  +  EA+++  ++++ G + +   +++++ G   +G   +A  + K+M + +   +
Sbjct: 469 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 528

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
           EV ++ L+ G C +GK+ EARM+  +M  RG KPD ++Y+++I G    G +++A ++ +
Sbjct: 529 EVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRD 588

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           EML +     P + TYN L+  LCK      + +LL  M+++G  PD
Sbjct: 589 EMLSI--GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 633



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 234/474 (49%), Gaps = 25/474 (5%)

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E ++ +  ++    + +++ F+L+++  C L   D A + F  M  +   P I T   ++
Sbjct: 162 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 221

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
               K NR++ A +L  EM       T  TFN+++N LCK G+L +A + +  M   G  
Sbjct: 222 SLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 281

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN V+YNT+IHG   +GN++ A  +LD M      P+  TYG++I+G+ K GR  + + +
Sbjct: 282 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 341

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M E     N   Y+TLI G   +G  E A     +M++KG  P+   Y+ L+  L  
Sbjct: 342 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 401

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G+  EA++++ EM   G   +A TY+ L+ G+   G   KA ++  +M         V 
Sbjct: 402 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 461

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ LI+ L    +++EA  ++ ++L +G  PDV+ +++M+ G C  G+VE A  L  EM 
Sbjct: 462 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM- 520

Query: 535 CLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             + KS  PD  T+N L+   C++  +  +  LL+ M  RG  PD ++ N  ++      
Sbjct: 521 --DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYG--- 575

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                             +R      F++ + ML    +P   T+  +++ LC+
Sbjct: 576 ------------------RRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCK 611



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 195/408 (47%), Gaps = 38/408 (9%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV +FN ++NV+ +EG   +A EF   +   + +   PN +++N +I      G ++ A 
Sbjct: 248 TVYTFNIMVNVLCKEGKLKKAREFIGFM---EGLGFKPNVVSYNTIIHGYSSRGNIEGAR 304

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           ++   M V+  EPD YTY +L+ G+CKE RL+EA  L D+M   G  P  VT+N LI+G 
Sbjct: 305 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 364

Query: 273 CKNGEL-----------------------------------GRAAKLVDNMFLKGCLPNE 297
           C  G+L                                   G A  ++  M  KG +P+ 
Sbjct: 365 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 424

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           +TYN LI+G    GN  KA  L + M++    P  VTY ++I  L +  R  +   +   
Sbjct: 425 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 484

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           + ++    +  +++ ++ G    G  E A  L K+M  K   P+ V ++ L+ G CR GK
Sbjct: 485 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 544

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            +EA  +L EM   G   +  +Y++L+ G+   G    A  +  +M         + Y+ 
Sbjct: 545 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 604

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
           LI  LC++ +   A  +  +M+++G  PD   Y S+I G+ N  ++ E
Sbjct: 605 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 652



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 16/373 (4%)

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           + + ++ L+   C     D+A      M     +P   T   +++  +KL R      + 
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M   +     Y ++ +++ L KEGK + A +    M   G KPN V Y+ +I G    
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G  + A  IL  M   G   +++TY SL+ G  + G+  +A  ++  M +   V N V Y
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + LI G C  G L  A     +M+ +G  P V  Y+ ++H L   G + EA  +  EM  
Sbjct: 358 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR- 416

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN--IFLTALKEKL 593
            +    PD  TYNIL+N   +  N   + DL N M+ +G +P  VT    I++ + + ++
Sbjct: 417 -KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 594 EAPQD------------GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
           +   D                 N +             F +++ M +K + P   T+  +
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 642 VQELCRPKRIQAA 654
           +Q  CR  +++ A
Sbjct: 536 MQGRCREGKVEEA 548


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 154/512 (30%), Positives = 255/512 (49%), Gaps = 50/512 (9%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL  +N ++   H    P+T+ FN ++ ++ +       + L R+M      PD+YT   
Sbjct: 29  ALSTFNRML---HKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++ LC  NR+D A   L ++   G  P   TF  LI GLC  G++G A  L D M  +G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN VTY TLI+GLC    + +A ++   M+     PN VTY ++I+GL KL       
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            ++  M + K   + +  +T++  L KEG   +A  +   M+ +G +PN V Y+AL+DG 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   + D A ++   M++  C AN  +Y++L+ G+ +     KA+ ++++M++     N 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRG---------------CK------------- 504
           V Y+ LIHGLC  G+L++A  ++ +M++RG               CK             
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385

Query: 505 -------PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCK 556
                  PD+  Y++++ G+C AG +E+A  LF+    L  K  QP+V+TYNI+++ LCK
Sbjct: 386 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN---LSSKGLQPNVWTYNIMIHGLCK 442

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
           Q  ++ +  L + M   GC P+  T N+         EA +   + L E+  R F    +
Sbjct: 443 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRT-IELLEEMLARGFSVDVS 501

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
           +        +L   LS      + V Q LC+P
Sbjct: 502 T------TTLLVGMLS-DDGLDQSVKQILCKP 526



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 169/626 (26%), Positives = 284/626 (45%), Gaps = 52/626 (8%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
           KLG +Q   +TF +LI+     G       +  +M  E       ++  +     K   V
Sbjct: 108 KLG-HQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQV 166

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
            EA  +F  M+ +      + ++NS+++ + +   +       N +V++K   I+P+  T
Sbjct: 167 TEAFNIFSEMITK-GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSK---IMPDVFT 222

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N V+  +C+ G+V  A  +   M  R  EP++ TY  LMDG C  N +D AV + D M 
Sbjct: 223 LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMV 282

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
              C    +++N LING CK   + +A  L + M  +   PN VTYNTLIHGLC  G L 
Sbjct: 283 HKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQ 342

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEYIYSTL 373
            A+SL   MVA   +P+ VTY T+ + L K  R +D A  L+ ++E   +  +  IY+T+
Sbjct: 343 DAISLFHEMVARGQIPDLVTYRTLSDYLCK-NRHLDKAMALLKAIEGSNWDPDIQIYTTI 401

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + G+ + G+ EDA  L+  +  KG +PN   Y+ +I GLC+ G   EA ++  EM  NGC
Sbjct: 402 LDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGC 461

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           + N  TY+ + +GF  + +  + +E+ ++M       +    ++L+  L +DG  +  + 
Sbjct: 462 SPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQ 521

Query: 494 VW-----------TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ- 541
           +            TQM S        +++S+     +  ++++AL  FN ML + P    
Sbjct: 522 ILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPST 581

Query: 542 --------------------------------PDVFTYNILLNALCKQSNISHSIDLLNS 569
                                           PDV+T NIL+N+ C    + ++  +L  
Sbjct: 582 VDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAK 641

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF-LNELAIRLFKRQRTSGGFKIVEVMLQ 628
           ++  G  PD+VT    +  L + +        F  N L   L           ++  M+ 
Sbjct: 642 LLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVN 701

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAA 654
             + P    +  VV  LC+   I  A
Sbjct: 702 SKIMPNVVVFSTVVDALCKEGMIAIA 727



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 220/458 (48%), Gaps = 16/458 (3%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D A+  F  M  +   P    +  L+  + K       + L  +M   G  P   T  +
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           +IN LC    +  A   +  +   G  P+  T+ TLI GLC++G + +A+ L D+M+   
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN VTYGT+INGL K  +  +   +   M  +    N   Y++LI GL K  + +   
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L  +M++    P+    + ++D LC+ G   EA +++  MI+ G   N  TY++LM G 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
               +   AV+++  M   +CV N + Y+ LI+G C+   + +A  ++ +M  +   P+ 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNISHSIDL 566
           V Y+++IHGLC+ G +++A+ LF+EM+    + Q PD+ TY  L + LCK  ++  ++ L
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVA---RGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAP--QDGTDFLNELAIRLFKRQRTSGGFKIVE 624
           L ++     DPD+    I+ T L     A   +D  D  + L+ +  +    +    I  
Sbjct: 383 LKAIEGSNWDPDI---QIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHG 439

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
           +  Q  L+  +  +  + +  C P       N C  NL
Sbjct: 440 LCKQGLLAEASKLFSEMNKNGCSP-------NDCTYNL 470



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 192/396 (48%), Gaps = 51/396 (12%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL  +N ++   HM+  P+T+ F  ++ ++ ++      + L  +M      PD+YT   
Sbjct: 565 ALSSFNRML---HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C   RL  A  +L ++   G  P  VT+  L+NGLCK             M  KG
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKG 668

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+  TYN+LIH LC         +LL+ MV SK MPN V + T+++ L K G      
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            V+  M +R    +   Y+ L+ G     + ++A+K++  M+ KGC PN   Y+ LI+G 
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C++ + D+A  +L +M   G  A+  TY++L+ G    G+   A+ ++ +M  +  + + 
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 848

Query: 473 VCYSVL-----------------------------------IHGLCEDGKLREARMVWTQ 497
           V Y +L                                   I G+C  G+L  AR +++ 
Sbjct: 849 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 908

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           + S+G +PDV  Y+ MIHGLC  G ++EA KLF +M
Sbjct: 909 LSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 157/282 (55%), Gaps = 3/282 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++NS+++ +     +       N +VN+K   I+PN + F+ V+  +C+ G++  A  + 
Sbjct: 675 TYNSLIHALCNLCEWKHVTTLLNEMVNSK---IMPNVVVFSTVVDALCKEGMIAIAHDVV 731

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             M  R  EPD+ TY  LMDG C  + +DEAV + D M   GC P   ++N+LING C+ 
Sbjct: 732 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 791

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             + +A  L++ M L+G + + VTYNTLIHGLC  G L  A++L   MVAS  +P+ VTY
Sbjct: 792 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 851

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +++ L K     +   +L ++E      +  +Y+  I G+ + G+ E A  L+  +  
Sbjct: 852 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 911

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
           KG +P+   Y+ +I GLC+ G  DEA ++  +M  N   +N+
Sbjct: 912 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNS 953



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 150/597 (25%), Positives = 253/597 (42%), Gaps = 98/597 (16%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  I     +A  +E+A  LF  +  +   +  V ++N +++ + ++GL   A + ++ +
Sbjct: 398 YTTILDGMCRAGELEDARDLFSNLSSK-GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM-----D 235
                    PN  T+NL+ +   R       I+L  EM  R    D+ T   L+     D
Sbjct: 457 ---NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDD 513

Query: 236 GL--------CKE---------------------------------NRLDEAVLLLDEMQ 254
           GL        CK                                  N LD+A+   + M 
Sbjct: 514 GLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRML 573

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
                P+ V F  L+  + K         L   M   G  P+  T N LI+  C    L 
Sbjct: 574 HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLG 633

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A S+L +++     P+ VTYGT++NGL K             M  +    + + Y++LI
Sbjct: 634 YAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLI 680

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L    + +    L  +M+     PN VV+S ++D LC+ G    A +++  MI  G  
Sbjct: 681 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 740

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  TY++LM G     +  +AV+++  M    CV N   Y++LI+G C+  ++ +A  +
Sbjct: 741 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 800

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             QM  +G   D V Y+++IHGLC+ G ++ A+ LF+EM+       PD+ TY ILL+ L
Sbjct: 801 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA--SGQIPDLVTYRILLDYL 858

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIRLFK 612
           CK  +++ ++ LL ++     D D++  NI +  +    +LEA +D           LF 
Sbjct: 859 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARD-----------LFS 907

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA--------INKCWSN 661
              + G            L P   T+  ++  LC+   +  A         N  WSN
Sbjct: 908 NLSSKG------------LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSN 952


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/577 (25%), Positives = 268/577 (46%), Gaps = 49/577 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  + +A+  A  +  A+ +F  M  +  C+ +++S N +LN ++Q G    A   Y  
Sbjct: 150 SFDLLLRAHADAGQLSSALNVFDGM-GKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQ 208

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  A    +LP+  T  ++ K  CR G V  A++   EM     E ++  Y  +MD  C 
Sbjct: 209 MRIA---GVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCG 265

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEV 298
               ++A  +L+ +Q  G  P  VT+ +L+ G CK+G +  A ++V  M   G  + +EV
Sbjct: 266 MGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEV 325

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y  +I+G C +G +D A  + + M  +    N   Y T+INGL KLGR  +  +VL  M
Sbjct: 326 AYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEM 385

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E+     ++Y Y+TLI G  +EG    A ++ + M+  G    T+ Y+ L+ G C +   
Sbjct: 386 EDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAI 445

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A  + F M+  G A N  + S+L+ G F++GK  +A+ +WK+        N + ++ +
Sbjct: 446 DDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTV 505

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCL 536
           I+GLC+ G++ EA  +  +M    C PD + Y ++  G C  G +  A  L N+M  L  
Sbjct: 506 INGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGF 565

Query: 537 EPKSQ-------------------------------PDVFTYNILLNALCKQSNISHSID 565
            P  +                               P++ TY  L+   CK+ N+  + +
Sbjct: 566 APSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACN 625

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD--------GTDFLNELAIRLFKRQRTS 617
           L   M++ G +P++  C+  ++   ++ +  +           D +   +I   +  + S
Sbjct: 626 LYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS 685

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               +V+ +           W  ++  LC+  RI  A
Sbjct: 686 ---HVVDTIADGNPHSANVMWNVIIFGLCKSGRIADA 719



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 207/434 (47%), Gaps = 38/434 (8%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + ++F+L+++     G + +A+ +F  M    C P + +   L++ L +      A ++ 
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M++ G  P   T  ++    C++G + +A + V+ M   G   N V Y+ ++   C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTY----------------------------------- 335
           G  + A  +L+ +      PN VTY                                   
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVA 326

Query: 336 -GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
            G +ING  + GR  D  RV   M +   HVN ++Y+T+I+GL K G+ E+  K+ ++M 
Sbjct: 327 YGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEME 386

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           + G +P+   Y+ LIDG CR G   +A E+   M+ NG AA   TY++L+KGF       
Sbjct: 387 DVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAID 446

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A+ +W  M K     NE+  S L+ GL + GK  +A  +W + L+RG   +V+ ++++I
Sbjct: 447 DALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVI 506

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +GLC  G + EA +L + M   E +  PD  TY  L +  CK   +  +  L+N M   G
Sbjct: 507 NGLCKIGRMAEAEELLDRM--KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLG 564

Query: 575 CDPDLVTCNIFLTA 588
             P +   N F+T 
Sbjct: 565 FAPSVEMFNSFITG 578



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/494 (25%), Positives = 237/494 (47%), Gaps = 45/494 (9%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           +I+ + + + ++I   C+ G +D+A ++  EM       +++ Y T+++GLCK  R++E 
Sbjct: 319 DIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEV 378

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             +L EM+  G  P   ++N LI+G C+ G + +A ++   M   G     +TYNTL+ G
Sbjct: 379 QKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKG 438

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C    +D A+ L   M+     PNE++  T+++GL K G+      +      R    N
Sbjct: 439 FCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKN 498

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              ++T+I+GL K G+  +A +L  +M E  C P+++ Y  L DG C++G+   A  ++ 
Sbjct: 499 VITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMN 558

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +M + G A +   ++S + G F + + HK  +I  +M+      N V Y  LI G C++G
Sbjct: 559 KMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEG 618

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            L EA  ++ +M++ G  P+V   S+++      G V+EA  +  +++ ++      + T
Sbjct: 619 NLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSIST 678

Query: 547 ------------------------YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
                                   +N+++  LCK   I+ +  L  S+ ++   PD    
Sbjct: 679 IEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPD---- 734

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           N   ++L     A    +  ++E              F + +VML   L+P   T+  ++
Sbjct: 735 NFTYSSLIHGCAA----SGSIDE-------------AFSLRDVMLSAGLTPNIITYNSLI 777

Query: 643 QELCRPKRIQAAIN 656
             LC+  ++  A+N
Sbjct: 778 YGLCKSGKLSRAVN 791



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 158/606 (26%), Positives = 260/606 (42%), Gaps = 119/606 (19%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL-EKSFIFIFKAYGKAHLVEEAIRL--- 140
           T+  L++ Y   G  +  E V+  M+    +V+ E ++  +   Y +   +++A R+   
Sbjct: 290 TYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNE 349

Query: 141 ------------FHTMVDEFHCK-------------------RTVK-SFNSVLNVIIQEG 168
                       ++TM++   CK                   R  K S+N++++   +EG
Sbjct: 350 MRDAGIHVNLFVYNTMINGL-CKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREG 408

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
              +A E    +V      +   TLT+N ++K  C L  +D+A++L+  M  R   P+  
Sbjct: 409 SMRKAFEMCRMMVRN---GLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEI 465

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           +  TL+DGL K  + ++A+ L  E    G     +TFN +INGLCK G +  A +L+D M
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM------------------------- 323
               C P+ +TY TL  G C  G L  A  L+++M                         
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 324 ----------VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
                      A    PN VTYG +I G  K G   +   +   M     + N +I S L
Sbjct: 586 HKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSAL 645

Query: 374 ISGLFKEGKAEDA----MKLWKQMMEKGCKPNT----------------------VVYSA 407
           +S  +KEGK ++A     KL    M  GC  +T                      V+++ 
Sbjct: 646 MSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNV 705

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I GLC+ G+  +A+ +   + N     + FTYSSL+ G   SG   +A  +   M    
Sbjct: 706 IIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG 765

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS----- 522
              N + Y+ LI+GLC+ GKL  A  ++ ++ S+G  P+ + Y+++I   C  G      
Sbjct: 766 LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825

Query: 523 -----------VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
                      +EEA+KL ++M  +E    P+  TY  L++   K  N+     L + M 
Sbjct: 826 KLKQKMVEEGYMEEAIKLLDQM--IENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMH 883

Query: 572 DRGCDP 577
            RG  P
Sbjct: 884 IRGLLP 889



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 201/460 (43%), Gaps = 40/460 (8%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM--QVDGCFP------ 260
           D A+ LFR  P R   P + ++  L+  L +  R  +A  LL  +    +  FP      
Sbjct: 85  DAALHLFRLAPSR---PSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVY 141

Query: 261 -----TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
                + V+F++L+      G+L  A  + D M   GC P+  + N L++ L   G+   
Sbjct: 142 RDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGM 201

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +  +M  +  +P+E T   +     + GR       +  ME     VN   Y  ++ 
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CA 434
                G  EDA ++ + +  KG  PN V Y+ L+ G C+ G+ +EAE ++ EM   G   
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +   Y  ++ G+ + G+   A  +  +M       N   Y+ +I+GLC+ G++ E + V
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M   G +PD  +Y+++I G C  GS+ +A ++   M  +         TYN LL   
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMM--VRNGLAATTLTYNTLLKGF 439

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           C    I  ++ L   M+ RG  P+ ++C+  L           DG          LFK  
Sbjct: 440 CSLHAIDDALRLWFLMLKRGVAPNEISCSTLL-----------DG----------LFKAG 478

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +T     + +  L + L+    T+  V+  LC+  R+  A
Sbjct: 479 KTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEA 518



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 23/174 (13%)

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHL--VEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
           L+   R KR  L  +F +    +G A    ++EA  L   M+        + ++NS++  
Sbjct: 722 LFESLRNKRF-LPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNII-TYNSLIYG 779

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG----------------L 207
           + + G   RA+  +N +   +   I PN +T+N +I   C+ G                 
Sbjct: 780 LCKSGKLSRAVNLFNKL---QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGY 836

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           ++ AI+L  +M   N +P+  TYCTL+ G  K   ++E   L DEM + G  PT
Sbjct: 837 MEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/513 (29%), Positives = 238/513 (46%), Gaps = 51/513 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y ++GD  + +  L  + R        ++      Y +  L   A RLF  +
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF-LL 134

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +  C RT                                        T+  +++ +C 
Sbjct: 135 MPQRGCART--------------------------------------PFTYAALLQGLCG 156

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G+V  A+ +F  M    C PD + Y  ++ GLC   R  EAV LL +    G  P    
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+G C  G+L  A  +   M  KGCLPN  TY  LI G C  G +++A+ L  RM+
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI 276

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +   PN VTY T+I G    G      R+L SME      NE+    LI  L K G+ E
Sbjct: 277 EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIE 336

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +    +++KG K N V+Y+++ID LC+ GK D A  ++ ++I  G   +A  YSSL+
Sbjct: 337 EAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLI 396

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR-----MVWTQML 499
            G     K  +A+ +  DM ++    N V +++LI     D  LRE R     M+  +M 
Sbjct: 397 DGLCRENKLLEAISLLNDMIESGVQANAVPFTILI-----DKHLREFRSDSPKMISDRMA 451

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           + G KPDVV Y+  I   C  G +E+A  +  +M  ++   +P++ TYN L+        
Sbjct: 452 AAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQM--IDHGVRPNLTTYNTLIKGYANLGL 509

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +S +   L +M+D GC P+  +  + L  L +K
Sbjct: 510 VSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKK 542



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/468 (27%), Positives = 204/468 (43%), Gaps = 71/468 (15%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R + ++ +++N     G    A    + ++ A    + P++  +   +   CR GL  +A
Sbjct: 72  RNLHTYTTLINAYCHAGDLPAAKRHLSSLLRA---GLAPDSHAYTSFVLGYCRTGLFAHA 128

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
            +LF  MP R C    +TY  L+ GLC    + EA+ +   M  DGC P    ++++++G
Sbjct: 129 CRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHG 188

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LC  G  G A  L+ +   KG +PN   YN LI G C  G+L+ A+ +   M +  C+PN
Sbjct: 189 LCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPN 248

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             TY                                   + LI G  K GK E AM L+ 
Sbjct: 249 VRTY-----------------------------------TQLICGFCKSGKVERAMVLYS 273

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M+E G  PN V Y+ LI G C  G  + A  +L  M   G A N +T   L+    + G
Sbjct: 274 RMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHG 333

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +  +A +    + +     N+V Y+ +I  LC+ GK   A  +  ++++ G  PD   YS
Sbjct: 334 RIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYS 393

Query: 512 SMIHGLCNAGSVEEALKLFNEML-----------------------CLEPK--------- 539
           S+I GLC    + EA+ L N+M+                          PK         
Sbjct: 394 SLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAA 453

Query: 540 -SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             +PDV TY + + + C+   +  +  ++  M+D G  P+L T N  +
Sbjct: 454 GVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLI 501



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 188/398 (47%), Gaps = 6/398 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P     N ++  + R G++ +   L   MPVRN    ++TY TL++  C    L  A  
Sbjct: 40  VPPIRCLNTLLMALARHGMLSDMESLAARMPVRN----LHTYTTLINAYCHAGDLPAAKR 95

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
            L  +   G  P    +   + G C+ G    A +L   M  +GC     TY  L+ GLC
Sbjct: 96  HLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLC 155

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G + +A+++   M    C P+   Y  +++GL   GRA +   +L     + F  N  
Sbjct: 156 GAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA 215

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           +Y+ LI G    G  E A+ ++K M  KGC PN   Y+ LI G C+ GK + A  +   M
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM 275

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I  G A N  TY++L++G    G    A  +   M       NE    VLI  LC+ G++
Sbjct: 276 IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRI 335

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EA+     ++ +G K + V Y+SMI  LC +G  + A  L  ++  +     PD   Y+
Sbjct: 336 EEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKI--ITEGFVPDAHMYS 393

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            L++ LC+++ +  +I LLN M++ G   + V   I +
Sbjct: 394 SLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILI 431



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 123/505 (24%), Positives = 214/505 (42%), Gaps = 57/505 (11%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y     +E AI +F  M  +  C   V+++  ++    + G   RA+  Y+ ++ A
Sbjct: 220 LIDGYCSTGDLELAIDIFKGMQSK-GCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEA 278

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               + PN +T+  +I+  C  G +++A +L   M      P+ +T   L+D LCK  R+
Sbjct: 279 ---GLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRI 335

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA   L  +   G     V +  +I+ LCK+G+   A  L+  +  +G +P+   Y++L
Sbjct: 336 EEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSL 395

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I GLC +  L +A+SLL+ M+ S    N V +  +I+  ++  R+     +   M     
Sbjct: 396 IDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGV 455

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+  I    ++G+ EDA  +  QM++ G +PN   Y+ LI G   +G   +A  
Sbjct: 456 KPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFS 515

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHK----AVEIWK------------DMAKNN 467
            L  MI+NGC  N  +Y+ L+    +    H     ++ +WK            ++ K  
Sbjct: 516 SLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQ 575

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH------------ 515
           C      Y   I  L +  +L EA+     M S    P    Y+ MI             
Sbjct: 576 CSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEAL 635

Query: 516 -----------------------GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
                                   LC  GS   A  +F ++L  E     D   + IL++
Sbjct: 636 RFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNR--DEIAWKILID 693

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDP 577
            L ++ N +    LL+ M ++ C P
Sbjct: 694 GLLQKGNTADCSRLLSFMEEQNCRP 718



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 170/373 (45%), Gaps = 26/373 (6%)

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTL+  L   G L    SL  RM       N  TY T+IN     G      R L S+  
Sbjct: 47  NTLLMALARHGMLSDMESLAARMPVR----NLHTYTTLINAYCHAGDLPAAKRHLSSLLR 102

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                + + Y++ + G  + G    A +L+  M ++GC      Y+AL+ GLC  G   E
Sbjct: 103 AGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVRE 162

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  +   M  +GCA ++  YS ++ G   +G+  +AV +  D      V N   Y+ LI 
Sbjct: 163 AMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALID 222

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C  G L  A  ++  M S+GC P+V  Y+ +I G C +G VE A+ L++ M  +E   
Sbjct: 223 GYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM--IEAGL 280

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQD 598
            P+V TY  L+   C + ++ H+  LL+SM   G  P+  TC + + AL    ++E  Q 
Sbjct: 281 APNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQ- 339

Query: 599 GTDFLNELAIRLFKRQRT-----------SGGFKIVEVMLQKFLS----PQTSTWERVVQ 643
              FL  L  +  K  +            SG F     ++QK ++    P    +  ++ 
Sbjct: 340 --QFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLID 397

Query: 644 ELCRPKRIQAAIN 656
            LCR  ++  AI+
Sbjct: 398 GLCRENKLLEAIS 410



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 204/472 (43%), Gaps = 34/472 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLY-RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+  LI  +  SG  +   MVLY RM          ++  + +       +E A RL H+
Sbjct: 251 TYTQLICGFCKSGKVER-AMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHS 309

Query: 144 M------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           M       +E+ C         +++ + + G    A +F   +V      I  N + +  
Sbjct: 310 MEACGLAPNEWTCL-------VLIDALCKHGRIEEAQQFLGSLVQK---GIKVNQVIYTS 359

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I  +C+ G  D A  L +++      PD + Y +L+DGLC+EN+L EA+ LL++M   G
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESG 419

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
                V F +LI+   +         + D M   G  P+ VTY   I   C  G ++ A 
Sbjct: 420 VQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAE 479

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           S++ +M+     PN  TY T+I G   LG        L +M +     N+  Y+ L+  L
Sbjct: 480 SMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLL 539

Query: 378 FKEGK----AEDAMKLWK------------QMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            K+        D++ LWK            ++++  C   + VY   I  L +V + +EA
Sbjct: 540 LKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEA 599

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           +  L  M +     +   Y+ +++  +      +A+     M K N +     Y  +I  
Sbjct: 600 KSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICA 659

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           LCE+G    A+ ++  +LS+    D +A+  +I GL   G+  +  +L + M
Sbjct: 660 LCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFM 711



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/354 (22%), Positives = 148/354 (41%), Gaps = 44/354 (12%)

Query: 48  NKQMETEPQGNAKSEQPFS-------DEIFNSTPKLGSYQLGDS-------TFYSLIQHY 93
           N  +E+  Q NA    PF+        E  + +PK+ S ++  +       T+   I+ Y
Sbjct: 413 NDMIESGVQANA---VPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSY 469

Query: 94  ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRT 153
              G  +  E ++ +M          ++  + K Y    LV +A      M+D   CK  
Sbjct: 470 CQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDN-GCKPN 528

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI- 212
            +S+  +L +++++  YH                        +LV  ++    +VD  + 
Sbjct: 529 DESYTVLLGLLLKKNSYH------------------------DLVADSISLWKIVDMKVL 564

Query: 213 -QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
            +L  E+    C    Y Y   +  L K +RL+EA   L  MQ     P+   +  +I  
Sbjct: 565 EELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIEC 624

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
             +   L  A + +D+M  +  LP   +Y  +I  LC +G+   A S+   +++ +   +
Sbjct: 625 CYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRD 684

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           E+ +  +I+GL++ G   D +R+L  MEE+       IYS L   +    +A++
Sbjct: 685 EIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVTSEAQE 738



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 19/254 (7%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR---- 242
            + PN  T+N +IK    LGLV  A    + M    C+P+  +Y  L+  L K+N     
Sbjct: 489 GVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDL 548

Query: 243 ----------LDEAVL--LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
                     +D  VL  LL+E+    C      ++  I  L K   L  A   +  M  
Sbjct: 549 VADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQS 608

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
               P+E  Y  +I        L +A+  LD MV    +P   +Y  II  L + G    
Sbjct: 609 ANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHT 668

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +   +  ++++ +E  +  LI GL ++G   D  +L   M E+ C+P + +YS L  
Sbjct: 669 AKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTG 728

Query: 411 GLCRVGKPDEAEEI 424
               +    EA+EI
Sbjct: 729 ---EITVTSEAQEI 739


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 249/467 (53%), Gaps = 8/467 (1%)

Query: 114 RVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
           R+ ++ S +F  + +   +    +EA + F+ M+ E      +++ N +L++ ++     
Sbjct: 151 RLSVKSSIVFDLLVRVCCELRRADEAFKCFY-MMKEKGIVPKIETCNDMLSLFLKLNRME 209

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            A   Y  +     + I     TFN+++  +C+ G +  A +    M     +P++ +Y 
Sbjct: 210 MAWVLYAEMF---RLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYN 266

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           T++ G      ++ A  +LD M+V G  P   T+  LI+G+CK G L  A+ L D M   
Sbjct: 267 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 326

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G +PN VTYNTLI G C KG+L++A S  D MV    MP+  TY  +++ L   GR  + 
Sbjct: 327 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 386

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             ++  M ++    +   Y+ LI+G  + G A+ A  L  +M+ KG +P  V Y++LI  
Sbjct: 387 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 446

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L R  +  EA+++  ++++ G + +   +++++ G   +G   +A  + K+M + +   +
Sbjct: 447 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 506

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
           EV ++ L+ G C +GK+ EARM+  +M  RG KPD ++Y+++I G    G +++A ++ +
Sbjct: 507 EVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRD 566

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           EML +     P + TYN L+  LCK      + +LL  M+++G  PD
Sbjct: 567 EMLSI--GFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPD 611



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 234/474 (49%), Gaps = 25/474 (5%)

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E ++ +  ++    + +++ F+L+++  C L   D A + F  M  +   P I T   ++
Sbjct: 140 ELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDML 199

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
               K NR++ A +L  EM       T  TFN+++N LCK G+L +A + +  M   G  
Sbjct: 200 SLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFK 259

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN V+YNT+IHG   +GN++ A  +LD M      P+  TYG++I+G+ K GR  + + +
Sbjct: 260 PNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGL 319

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M E     N   Y+TLI G   +G  E A     +M++KG  P+   Y+ L+  L  
Sbjct: 320 FDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 379

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G+  EA++++ EM   G   +A TY+ L+ G+   G   KA ++  +M         V 
Sbjct: 380 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVT 439

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ LI+ L    +++EA  ++ ++L +G  PDV+ +++M+ G C  G+VE A  L  EM 
Sbjct: 440 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEM- 498

Query: 535 CLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             + KS  PD  T+N L+   C++  +  +  LL+ M  RG  PD ++ N  ++      
Sbjct: 499 --DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYG--- 553

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                             +R      F++ + ML    +P   T+  +++ LC+
Sbjct: 554 ------------------RRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCK 589



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 195/408 (47%), Gaps = 38/408 (9%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV +FN ++NV+ +EG   +A EF   +   + +   PN +++N +I      G ++ A 
Sbjct: 226 TVYTFNIMVNVLCKEGKLKKAREFIGFM---EGLGFKPNVVSYNTIIHGYSSRGNIEGAR 282

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           ++   M V+  EPD YTY +L+ G+CKE RL+EA  L D+M   G  P  VT+N LI+G 
Sbjct: 283 RILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGY 342

Query: 273 CKNGEL-----------------------------------GRAAKLVDNMFLKGCLPNE 297
           C  G+L                                   G A  ++  M  KG +P+ 
Sbjct: 343 CNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDA 402

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           +TYN LI+G    GN  KA  L + M++    P  VTY ++I  L +  R  +   +   
Sbjct: 403 ITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 462

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           + ++    +  +++ ++ G    G  E A  L K+M  K   P+ V ++ L+ G CR GK
Sbjct: 463 ILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 522

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            +EA  +L EM   G   +  +Y++L+ G+   G    A  +  +M         + Y+ 
Sbjct: 523 VEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNA 582

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
           LI  LC++ +   A  +  +M+++G  PD   Y S+I G+ N  ++ E
Sbjct: 583 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 630



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 16/373 (4%)

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           + + ++ L+   C     D+A      M     +P   T   +++  +KL R      + 
Sbjct: 156 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 215

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M   +     Y ++ +++ L KEGK + A +    M   G KPN V Y+ +I G    
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G  + A  IL  M   G   +++TY SL+ G  + G+  +A  ++  M +   V N V Y
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + LI G C  G L  A     +M+ +G  P V  Y+ ++H L   G + EA  +  EM  
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR- 394

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN--IFLTALKEKL 593
            +    PD  TYNIL+N   +  N   + DL N M+ +G +P  VT    I++ + + ++
Sbjct: 395 -KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453

Query: 594 EAPQD------------GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
           +   D                 N +             F +++ M +K + P   T+  +
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513

Query: 642 VQELCRPKRIQAA 654
           +Q  CR  +++ A
Sbjct: 514 MQGRCREGKVEEA 526


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 172/610 (28%), Positives = 278/610 (45%), Gaps = 109/610 (17%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRR----EKRVVLEKSFIFIFKAYGK-----AHLV 134
           S F SL+  Y N  D+     +L RM         VV     IFI    G+       L+
Sbjct: 113 SLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYN---IFIGSICGQEKLPSPDLL 169

Query: 135 EEAIRLFHTMVDEFHC---KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           + A +++  M+   +C   K  V +F   L  +   G + +A +    ++       +P+
Sbjct: 170 DLAEKIYGEMLAA-NCVLNKVNVANFARCLCGV---GKFDKAFQLIKEMMRK---GFVPD 222

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T T++ VI  +C    V+ A  LF+EM +    PD+YTY  L+D  CK   +++A  L +
Sbjct: 223 TSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFE 282

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM+  GC PT VT+  LI+   K  ++ +A  +   M   GC PN+VTY  L+ GLC  G
Sbjct: 283 EMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAG 342

Query: 312 NLDKAV---------------------------------------------------SLL 320
           N+ KA                                                     LL
Sbjct: 343 NISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 402

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D M++S C PN + Y  +I+G  K G+      V + M +  +  + + Y++LI  +FK+
Sbjct: 403 DAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKD 462

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ + AMK+  QM++  C PN V Y+A+IDGLCR+G+ ++A ++L  M   GC+ N  TY
Sbjct: 463 GRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTY 522

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV------ 494
           ++L+ G  ++GK   +++++  M++  C  N V Y VLI+ LC  G L +AR++      
Sbjct: 523 TALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQ 582

Query: 495 --WTQML-------------------------SRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
             W + L                         S G  P    Y  +I     AG +E A+
Sbjct: 583 TYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAM 642

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           +L  EM+ +    + D   Y  L+ ALC  S +  +  L + M  RG  P+L   ++F+ 
Sbjct: 643 ELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPEL---SVFVC 699

Query: 588 ALKEKLEAPQ 597
            +K  +E  +
Sbjct: 700 LIKGLVEVKK 709



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 212/469 (45%), Gaps = 45/469 (9%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D A+     M   +C P++ TY TL+ G  K+ +L     +++ M  +GC P P  FN L
Sbjct: 59  DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 118

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL------DKAVSLLDR 322
           ++  C   +   A KL++ M   GC P  V YN  I  +C +  L      D A  +   
Sbjct: 119 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 178

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+A+ C+ N+V        L  +G+     +++  M  + F  +   YS +I+ L    K
Sbjct: 179 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 238

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            E A  L+++M   G  P+   Y+ LID  C+ G  ++A+ +  EM + GC+    TY++
Sbjct: 239 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 298

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+  + ++ +  +A +I+  M    C  N+V Y  L+ GLC+ G + +A  V+ +++   
Sbjct: 299 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 358

Query: 503 ----------CK------PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
                     C+      P+VV Y +++ GLC A  V+ A +L + M  L    +P+   
Sbjct: 359 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAM--LSSGCEPNHIV 416

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           Y+ L++  CK   I  + ++   M   G  P + T                        L
Sbjct: 417 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHT---------------------YTSL 455

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             R+FK  R     K++  ML+   +P   T+  ++  LCR    + A+
Sbjct: 456 IDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 504



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 199/493 (40%), Gaps = 94/493 (19%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +PN +T+  ++    +   +    ++   M    C P+   + +L+   C E     A  
Sbjct: 74  IPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYK 133

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKN--------------------------------- 275
           LL+ M   GC P  V +N+ I  +C                                   
Sbjct: 134 LLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVAN 193

Query: 276 --------GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
                   G+  +A +L+  M  KG +P+  TY+ +I  LC    ++KA  L   M    
Sbjct: 194 FARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVG 253

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+  TY  +I+   K G       +   M           Y+ LI    K  +   A 
Sbjct: 254 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 313

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVG------------------------------- 416
            ++ +M++ GC+PN V Y AL+DGLC+ G                               
Sbjct: 314 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 373

Query: 417 --------------------KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
                               K D A E+L  M+++GC  N   Y +L+ GF ++GK   A
Sbjct: 374 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSA 433

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            E++  M K   + +   Y+ LI  + +DG+L  A  V +QML   C P+VV Y++MI G
Sbjct: 434 QEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDG 493

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC  G  E+ALKL + M   E    P+V TY  L++ L K   I  S+DL   M  +GC 
Sbjct: 494 LCRIGESEKALKLLSLM--EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCS 551

Query: 577 PDLVTCNIFLTAL 589
           P+ VT  + +  L
Sbjct: 552 PNYVTYRVLINHL 564



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 188/418 (44%), Gaps = 26/418 (6%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           + E+   +D   V GCF          + LCK G    A  +++    K    + V    
Sbjct: 1   MSESGFCMDRFTV-GCFA---------HALCKEGRWADALDMIEREDFK---LDTVLCTH 47

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I GL      D+A+S L RM  + C+PN VTY T+++G +K  +     R++  M    
Sbjct: 48  MISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEG 107

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC---RVGKP- 418
            + N  ++++L+     E     A KL  +M   GC P  VVY+  I  +C   ++  P 
Sbjct: 108 CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPD 167

Query: 419 --DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
             D AE+I  EM+   C  N    ++  +     GK  KA ++ K+M +   V +   YS
Sbjct: 168 LLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYS 227

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            +I  LC   K+ +A +++ +M   G  PDV  Y+ +I   C AG +E+A  LF EM  +
Sbjct: 228 KVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSV 287

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                P V TY  L++A  K   +  + D+ + M+D GC P+ VT    +  L    +A 
Sbjct: 288 --GCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGL---CKAG 342

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                F  E+  +L     ++          +  L+P   T+  +V  LC+  ++  A
Sbjct: 343 NISKAF--EVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHA 398



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 157/338 (46%), Gaps = 39/338 (11%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KAH V+ A  L   M+    C+     ++++++   + G    A E +  +    +   L
Sbjct: 391 KAHKVDHAHELLDAMLSS-GCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGY---L 446

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  T+  +I  + + G +D A+++  +M   +C P++ TY  ++DGLC+    ++A+ L
Sbjct: 447 PSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKL 506

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M+  GC P  VT+  LI+GL K G++  +  L   M  KGC PN VTY  LI+ LC 
Sbjct: 507 LSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCA 566

Query: 310 KGNLDKA---------------------------------VSLLDRMVASKCMPNEVTYG 336
            G LDKA                                 + +L+ M +   +P    YG
Sbjct: 567 AGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEMESYGTVPIAPVYG 626

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
            +I+   K GR      +   M E    V  +  +Y++LI  L    + E+A +L+ +M 
Sbjct: 627 MLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMT 686

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
            +G  P   V+  LI GL  V K DEA ++ + + + G
Sbjct: 687 RRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 231/443 (52%), Gaps = 33/443 (7%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF------- 176
           +  AY +  LVEEA +L ++       +  + ++N++L  + + G Y RA +        
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSR-GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356

Query: 177 --------YN----------HIVNAKHM-------NILPNTLTFNLVIKTVCRLGLVDNA 211
                   YN          +I+ A+ +        +LP+ ++F+ +I  + R G +  A
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           +  FREM      PD   Y  L+DG C+   L +A+ + DEM   GCF   VT+N  +NG
Sbjct: 417 LMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNG 476

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK      A  L + M  +G +P+  T+ TLI G C  GN+DKA++L + MV +   P+
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
           +VTY T+I+G  K G       +   M  +    +   Y T+++G    G   +A+ L  
Sbjct: 537 KVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCD 596

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           QM+EKG +PN V  + LI G CR G   +A E L +MI+NG   ++F+Y++L+ G+ +  
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              KA  +  +M K    +N + Y+++++G C +GK++EA  V  +M+  G  PD   YS
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716

Query: 512 SMIHGLCNAGSVEEALKLFNEML 534
           S+I+G  +  +++EA +  +EML
Sbjct: 717 SLINGHVSQDNMKEAFRFHDEML 739



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 222/429 (51%), Gaps = 7/429 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + ++N+++N   +EGL   A +  N   +++ M   P  LT+N ++  +C++G  D A  
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSF-SSRGME--PGLLTYNAILYGLCKIGKYDRAKD 348

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  EM      P+  TY TL+  +C+ + + EA  + DEM   G  P  V+F+ LI  L 
Sbjct: 349 VLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLA 408

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           +NG L +A      M   G +P+ V Y  LI G C  G L  A+ + D M+A  C  + V
Sbjct: 409 RNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVV 468

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T +NGL K     D   +   M ER    + Y ++TLI G  K+G  + A+ L++ M
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +    KP+ V Y+ LIDG C+ G+   A+E+  +MI      +  +Y +++ GF  SG  
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ +   M +     N V  + LI G C  G + +A    ++M+S G  PD  +Y+++
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           I G     ++E+A  L NEM   E +  Q ++ TYN++LN  C +  +  +  +L  M++
Sbjct: 649 IDGYLKEANLEKAFILINEM---EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705

Query: 573 RGCDPDLVT 581
            G +PD  T
Sbjct: 706 IGINPDGAT 714



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 232/440 (52%), Gaps = 6/440 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++ + N +L  +++ G    A E Y  +V      I  N  T N+++  +C+    +N +
Sbjct: 221 SINACNKLLGGLVRTGWVDLAWEIYGEVVRG---GIELNVYTLNIMVNALCKDRKFENVM 277

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
               +M  +    DI TY TL++  C+E  ++EA  LL+     G  P  +T+N ++ GL
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G+  RA  ++  M   G  PN  TYNTL+  +C + N+ +A  + D M     +P+ 
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           V++ ++I  L + G           ME      +  IY+ LI G  + G   DA+K+  +
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDE 457

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +GC  + V Y+  ++GLC+     +A+ +  EM+  G   + +T+++L++G+ + G 
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             KA+ +++ M + N   ++V Y+ LI G C+ G++  A+ +W  M+ +   PD ++Y +
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +++G C++G + EAL L ++M  LE   +P++ T N L+   C+  ++  + + L+ M+ 
Sbjct: 578 VLNGFCSSGLLPEALNLCDQM--LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635

Query: 573 RGCDPDLVTCNIFLTA-LKE 591
            G  PD  + N  +   LKE
Sbjct: 636 NGIIPDSFSYNTLIDGYLKE 655



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 225/512 (43%), Gaps = 53/512 (10%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           L ++L+++T  +   +    + F+ +  +     I     L+ GL +   +D A  +  E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +   G      T N+++N LCK+ +       + +M  KG   + VTYNTLI+  C +G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY-- 370
           +++A  LL+   +    P  +TY  I+ GL K+G+      VL+ M +     N   Y  
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 371 ---------------------------------STLISGLFKEGKAEDAMKLWKQMMEKG 397
                                            S+LI  L + G    A+  +++M   G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P+ V+Y+ LIDG CR G   +A ++  EM+  GC  +  TY++ + G  +      A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            ++ +M +   V +   ++ LI G C+DG + +A  ++  M+    KPD V Y+++I G 
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C AG +  A +L+++M  +     PD  +Y  +LN  C    +  +++L + M+++G  P
Sbjct: 548 CKAGEMGRAKELWDDM--IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFL---------------NELAIRLFKRQRTSGGFKI 622
           +LVTCN  +       + P+   ++L               N L     K       F +
Sbjct: 606 NLVTCNTLIKGYCRSGDMPK-AYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  M ++ L     T+  ++   C   ++Q A
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEA 696



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 4/248 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI+ Y   G+      +   M R      + ++  +   + KA  +  A  L+  M
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +      + S+ +VLN     GL   AL   + ++      I PN +T N +IK  CR
Sbjct: 564 IRKDIIPDHI-SYGTVLNGFCSSGLLPEALNLCDQMLEK---GIRPNLVTCNTLIKGYCR 619

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A +   +M      PD ++Y TL+DG  KE  L++A +L++EM+  G     +T
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N+++NG C  G++  A +++  M   G  P+  TY++LI+G   + N+ +A    D M+
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEML 739

Query: 325 ASKCMPNE 332
               +P++
Sbjct: 740 QRGLVPDD 747


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 165/643 (25%), Positives = 302/643 (46%), Gaps = 82/643 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SL++  A S  F  +E+VL  MR E+     ++   + +AY  + LVE+A+ L++ +
Sbjct: 96  AYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFV 155

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI--VNAKHMNILPNTLTFNLVIKTV 202
           +  +     V + NS+LN++++ G    A + Y+ +  ++      + N  T  +++K +
Sbjct: 156 LKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTC-IMVKGL 214

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ G ++   +L  +   + C P+I  Y TL+DG CK+  ++ A  L  E+++ G  PT 
Sbjct: 215 CKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTV 274

Query: 263 VTFNVLINGLCKNGELG-----------------------------------RAAKLVDN 287
            T+  +ING CK G+                                     +A + ++ 
Sbjct: 275 ETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEG 334

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   GC P+ VTYNTLI G C  G + +A  LL++ +    MPN+ +Y  +I+   K G 
Sbjct: 335 MIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGG 394

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
               +  L+ M ER    +   Y  L+ GL   G+ + A+ + ++M+E+G  P+  +Y+ 
Sbjct: 395 YDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNI 454

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG---------------- 451
           L+ GLC+  K   A+ +L EM++     +AF Y++L+ GF  +G                
Sbjct: 455 LMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKG 514

Query: 452 ------------KGHKAVEIWKD-------MAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
                       KG+    + KD       M K +   +E  YS +I G  +   L  A+
Sbjct: 515 MNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQ 574

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++ +M+   CKP+VV Y+S+I+G C  G +  +LK+F EM        P+V TY+IL+ 
Sbjct: 575 KMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQAC--GLVPNVVTYSILIG 632

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
           + CK++ +  +      M+   C P+ VT N  +          ++GT  ++E     F+
Sbjct: 633 SFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFS------KNGTRAISEKGNE-FQ 685

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             + S        M+    +P+++ +  ++  LC+    + A+
Sbjct: 686 ENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTAL 728



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 141/486 (29%), Positives = 239/486 (49%), Gaps = 22/486 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA-YGKAHLVEEAIRLFHT 143
           T+ ++I  +   GDFK+++ +L  M      V  + +  I  A Y   H+V +A+     
Sbjct: 276 TYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIV-KAVETIEG 334

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ E  CK  + ++N++++   ++G    A +     +      ++PN  ++  +I   C
Sbjct: 335 MI-ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGK---GLMPNKFSYTPLIHAYC 390

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G  D A     EM  R  +PD+ TY  L+ GL     +D A+ + ++M   G FP   
Sbjct: 391 KQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAG 450

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N+L++GLCK  +L  A  L+  M  +  LP+   Y TL+ G    GNLD+A  L +  
Sbjct: 451 IYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELT 510

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +     P  V Y  +I G  K G   D    +  M++R    +E+ YST+I G  K+   
Sbjct: 511 IEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDL 570

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A K++++M++  CKPN V Y++LI+G CR G    + +I  EM   G   N  TYS L
Sbjct: 571 DGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSIL 630

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG---------KLREARM- 493
           +  F +  K   A   +++M  N CV N+V ++ L++G  ++G         + +E +  
Sbjct: 631 IGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQS 690

Query: 494 ----VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
                + +M+S G  P   AY+S++  LC  G    AL+L N+M        PD  ++  
Sbjct: 691 MFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKM--TSKGCIPDSVSFVA 748

Query: 550 LLNALC 555
           LL+ +C
Sbjct: 749 LLHGVC 754



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 232/478 (48%), Gaps = 54/478 (11%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV+++ +++N   ++G + +A++     +N++ + +  N   +N +I    + G +  A+
Sbjct: 273 TVETYGAIINGFCKKGDF-KAIDRLLMEMNSRGLTV--NVQVYNTIIDARYKHGHIVKAV 329

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +    M    C+PDI TY TL+ G C++ ++ EA  LL++    G  P   ++  LI+  
Sbjct: 330 ETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAY 389

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G   RA+  +  M  +G  P+ VTY  L+HGL + G +D A+++ ++M+     P+ 
Sbjct: 390 CKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDA 449

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y  +++GL K  +      +L  M ++    + ++Y+TL+ G  + G  ++A KL++ 
Sbjct: 450 GIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFEL 509

Query: 393 MMEKGCKPNTVVYSALIDGLCRVG-----------------KPDE--------------- 420
            +EKG  P  V Y+A+I G C+ G                  PDE               
Sbjct: 510 TIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHD 569

Query: 421 ---AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
              A+++  EM+   C  N  TY+SL+ GF   G  H++++I+++M     V N V YS+
Sbjct: 570 LDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSI 629

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS--VEEA--------- 526
           LI   C++ KL +A   + +ML   C P+ V ++ +++G    G+  + E          
Sbjct: 630 LIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQ 689

Query: 527 ---LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
              L  F  M+       P    YN +L  LC+      ++ L N M  +GC PD V+
Sbjct: 690 SMFLNFFGRMI--SDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVS 745



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 159/315 (50%), Gaps = 17/315 (5%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           + ++++  I+ G    A + +   +  K MN  P  + +N +IK  C+ G++ +A+    
Sbjct: 487 YATLVDGFIRNGNLDEARKLFELTIE-KGMN--PGIVGYNAMIKGYCKFGMMKDAMACIN 543

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M  R+  PD +TY T++DG  K++ LD A  +  EM    C P  VT+  LING C+ G
Sbjct: 544 RMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKG 603

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +L R+ K+   M   G +PN VTY+ LI   C +  L  A S  + M+ +KC+PN+VT+ 
Sbjct: 604 DLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFN 663

Query: 337 TIINGLVKLG-RAVDGARVLMSMEERKFHVNEY-------------IYSTLISGLFKEGK 382
            ++NG  K G RA+          ++   +N +              Y++++  L + G 
Sbjct: 664 YLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGM 723

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A++L  +M  KGC P++V + AL+ G+C  G+  E + I+   +N      A  YSS
Sbjct: 724 FRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVSCNLNERELQIAVNYSS 783

Query: 443 LMKGFFESGKGHKAV 457
           ++  +   G    +V
Sbjct: 784 ILDQYLPQGTSEASV 798



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 143/293 (48%), Gaps = 19/293 (6%)

Query: 82  GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           G   + ++I+ Y   G  K     + RM++      E ++  +   Y K H ++ A ++F
Sbjct: 518 GIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMF 577

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             MV +  CK  V ++ S++N   ++G  HR+L+ +  +   +   ++PN +T++++I +
Sbjct: 578 REMV-KMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREM---QACGLVPNVVTYSILIGS 633

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK--------------ENRLDEAV 247
            C+   + +A   F EM +  C P+  T+  L++G  K              EN+    +
Sbjct: 634 FCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFL 693

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
                M  DG  P    +N ++  LC+ G    A +L + M  KGC+P+ V++  L+HG+
Sbjct: 694 NFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGV 753

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           CL+G   +  +++   +  + +   V Y +I++  +  G + + + +L +M E
Sbjct: 754 CLEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQGTS-EASVILQTMFE 805


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 221/397 (55%), Gaps = 9/397 (2%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +PN  T+ ++I+     G +D AIQL  EM     E +   + TLM GLC   R+ EA+ 
Sbjct: 6   MPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALE 65

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
               M  D C P  +T+  L++ LCK G+   A  ++  M  +GC P+ VT++TLI GLC
Sbjct: 66  HFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD-GARVLMSMEERKFHVNE 367
             G+ ++A  +L+ ++      ++  + TII  L     +V+  ++VL  +  + F    
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
            +++ +I+G  K    + A KL + M+EKGC PN   ++ LI GLC+  +  EA+++L +
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M+  GC+ N  TYS+++ G  + G+   A E+++ M + NC  N V +++LI GLC+  +
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK---SQPDV 544
           + EAR ++ +M   GC PD++ Y+S+I GLC +  V+EA +LF  +    P+   S  + 
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI----PESGVSAANA 360

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            TY+ L +       ++ +  + + ++D+G  PDL T
Sbjct: 361 VTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLAT 397



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 167/600 (27%), Positives = 279/600 (46%), Gaps = 69/600 (11%)

Query: 114 RVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL-- 169
           R+ +   F +  + + +  A  ++ AI+L   M      K      N+V++  + +GL  
Sbjct: 3   RICMPNKFTYGILIRGFSSAGDLDIAIQLLEEM------KSNGFEGNAVVHTTLMKGLCD 56

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
             R +E   H   A   +  P+ +T+  ++  +C+ G  D A  + REM  R C PD  T
Sbjct: 57  AGRVVEALEHF-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVT 115

Query: 230 YCTLMDGLCKENRLDEAVLLLDEM------QVDGCF------------------------ 259
           + TL+DGLCK    ++A  +L+++        D  F                        
Sbjct: 116 FSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVV 175

Query: 260 ------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 PT + FN++ING CK  +L  A KL++ M  KGC+PN  T+  LI GLC    +
Sbjct: 176 IAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRV 235

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  LL++MV   C PN VTY T+INGL K G+  D   +   ME R    N   ++ L
Sbjct: 236 GEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNIL 295

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I GL K  + E+A +L+ +M E GC P+ + Y++LIDGLC+  + DEA ++   +  +G 
Sbjct: 296 IDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGV 355

Query: 434 -AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
            AANA TYS+L  G+   G+   A  I+  +       +   Y+ LI   C+  +  E  
Sbjct: 356 SAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVV 415

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M S+G  P V   S+++ GL      E A++LF+ M         D   YN+++ 
Sbjct: 416 ELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSM--AARGCTDDALIYNLVVE 473

Query: 553 ALCKQSNISHSIDLLNSMM---DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            + + S  + ++ +L  ++   DR  +P     +  + +L + +    D    L++++ R
Sbjct: 474 GMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQ-VGRTDDAKQLLHKMSER 532

Query: 610 LF---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            F               + QR     ++ E M+    +P+ ST   V+  LC   ++  A
Sbjct: 533 GFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDA 592



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/548 (26%), Positives = 262/548 (47%), Gaps = 58/548 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+     +G F   + +L  M          +F  +     K    E+A R+   +
Sbjct: 80  TYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 139

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI-VNAKHMNIL------PNTLTFNL 197
           +     +R + + ++    IIQ     R    YN + + +K + ++      P  L FNL
Sbjct: 140 I-----QRGMGNSDAAFETIIQ-----RLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 189

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           VI   C+   +D+A +L   M  + C P+++T+  L+ GLCK NR+ EA  LL++M   G
Sbjct: 190 VINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG 249

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C P  VT++ +INGLCK G++  A +L   M  + C PN VT+N LI GLC    +++A 
Sbjct: 250 CSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEAR 309

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV-NEYIYSTLISG 376
            L  RM  + C P+ +TY ++I+GL K  +  +  ++  ++ E      N   YSTL  G
Sbjct: 310 QLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHG 369

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
               G+  DA +++  +++KG  P+   Y++LI   C+  +  E  E++ EM + G    
Sbjct: 370 YAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPR 429

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG--------------- 481
             T S+++ G FE     +A++++  MA   C  + + Y++++ G               
Sbjct: 430 VNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLE 489

Query: 482 -----------------------LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
                                  LC+ G+  +A+ +  +M  RG    V +Y+ ++ GL 
Sbjct: 490 QVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLS 549

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
                +EA ++F  M+   P   P++ T N++++ LC  + +  + +L+  M   GC PD
Sbjct: 550 RLQRWDEATQVFEAMVSAGPA--PEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPD 607

Query: 579 LVTCNIFL 586
           + TCN  +
Sbjct: 608 IETCNTLI 615



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/514 (26%), Positives = 241/514 (46%), Gaps = 58/514 (11%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI-------FIFKAYGKAHLVE 135
           D+ F ++IQ   N   + S+E+      +   VV+ K F         +   + KA  ++
Sbjct: 148 DAAFETIIQRLCNK--YNSVELA----SKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLD 201

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
            A +L   M+++  C   V +F  ++  + +      A +    +V        PN +T+
Sbjct: 202 SAYKLLEVMIEK-GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTG---GCSPNVVTY 257

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           + VI  +C+ G VD+A +LF+ M  RNC P++ T+  L+DGLCK  R++EA  L   M+ 
Sbjct: 258 STVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRE 317

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-LPNEVTYNTLIHGLCLKGNLD 314
            GC P  +T+N LI+GLCK+ ++  A +L   +   G    N VTY+TL HG    G + 
Sbjct: 318 TGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMA 377

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A  +   +V     P+  TY ++I    K  RAV+   ++  M  + F       S ++
Sbjct: 378 DACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVL 437

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS---------------------------- 406
            GLF+    E A++L+  M  +GC  + ++Y+                            
Sbjct: 438 GGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDR 497

Query: 407 ----------ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
                     AL++ LC+VG+ D+A+++L +M   G AA   +Y+ L+ G     +  +A
Sbjct: 498 KFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEA 557

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            ++++ M            +V+I  LC   K+ +A  +  +M   GC PD+   +++I G
Sbjct: 558 TQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGG 617

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
            C +G  + A KL  EM   E   +P+  T+++L
Sbjct: 618 YCKSGRADLARKLLEEM--TEAGLEPNDTTHDLL 649



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 168/332 (50%), Gaps = 25/332 (7%)

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +A  CMPN+ TYG +I G    G      ++L  M+   F  N  +++TL+ GL   G+ 
Sbjct: 1   MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +A++ ++  M K C P+ + Y+AL+  LC+ GK DEA+ +L EMI  GCA +  T+S+L
Sbjct: 61  VEALEHFRA-MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED-GKLREARMVWTQMLSRG 502
           + G  + G   +A  + +D+ +     ++  +  +I  LC     +  A  V   ++++G
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P V+ ++ +I+G C A  ++ A KL   M  +E    P+VFT+ IL+  LCK + +  
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVM--IEKGCVPNVFTFTILITGLCKANRVGE 237

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           +  LL  M+  GC P++VT +  +                       L K+ +    +++
Sbjct: 238 AQQLLEKMVTGGCSPNVVTYSTVING---------------------LCKQGQVDDAYEL 276

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            ++M ++   P   T   ++  LC+ KRI+ A
Sbjct: 277 FQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 308


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 157/549 (28%), Positives = 263/549 (47%), Gaps = 58/549 (10%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++LN   ++G+   A      +   K   I P   T+N ++    RLG +  A ++ 
Sbjct: 245 TYNTLLNAHCRKGMLGEARAL---LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ---------------VDGCF- 259
             M     EPD+ TY  L  GLC+  ++DEA  L DEM+               VD CF 
Sbjct: 302 ESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFK 361

Query: 260 --------------------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
                               PT VT N+++  LCK G+L  A   ++ +  +G  P+ +T
Sbjct: 362 WRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVIT 421

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTLI   C  GN+ KA +L+D MV      +  T  T++  L K+ R  D   +L S  
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R F  +E  Y T+++  FKE   E A++LW QM+E+   P+   Y+ LI GLCR+ +  
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA + L E++  G   +  TY+ ++  + + G    A      M +N+   + V  + L+
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +GLC  GKL +A  ++   + +G K DV+ Y+++I  +C  G V+ AL  F++M   E K
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDM---EVK 658

Query: 540 S-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--------- 589
             QPD FTYN++L+AL +      + ++L+ + D G       C +   +          
Sbjct: 659 GLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEH 718

Query: 590 --KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFK----IVEVMLQKFLSPQTSTWERVVQ 643
             K + E+ +   D   E  +       T G  K    +++ M+QK +   +ST+  +++
Sbjct: 719 EGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLME 778

Query: 644 ELCRPKRIQ 652
            L + ++ Q
Sbjct: 779 GLIKRQKRQ 787



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 148/537 (27%), Positives = 268/537 (49%), Gaps = 33/537 (6%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG--LYHRALEFYNHIVN 182
             AY +  L   A +L H++      + ++++ N+VL+ + +    L   +L+ +  ++ 
Sbjct: 142 LSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE 201

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
              + + PN  TFNL++ T C  G + +A+     M      PD  TY TL++  C++  
Sbjct: 202 ---LRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGM 258

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L EA  LL  M+ DG  PT  T+N L++   + G + +A K+V++M   G  P+  TYN 
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318

Query: 303 LIHGLCLKGNLDKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           L  GLC  G +D+A  L D M   S  +P+ VTY T+++   K   + D  R+L  M ++
Sbjct: 319 LAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
                   ++ ++  L KEGK E+A+   +++ E+G  P+ + Y+ LID  C+ G   +A
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKA 438

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             ++ EM+  G   + FT ++++    +  +   A E+     +   V +EV Y  ++  
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAA 498

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
             ++     A  +W QM+ R   P +  Y+++I GLC    ++EA+   NE+  +E    
Sbjct: 499 YFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEL--VEKGLV 556

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDG 599
           PD  TYNI+++A CK+ ++ ++    N M++    PD+VTCN  +    L  KL+     
Sbjct: 557 PDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK---- 612

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                  A++LF+     G  K V+V+          T+  ++Q +C+   +  A++
Sbjct: 613 -------ALKLFESWVEKG--KKVDVI----------TYNTLIQSMCKVGDVDTALH 650



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 174/364 (47%), Gaps = 24/364 (6%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN  T+N L+H  C KG L  A++ L  M      P+ VTY T++N   + G   +   +
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M+       +  Y+TL+S   + G  + A K+ + M   G +P+   Y+ L  GLC+
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQ 325

Query: 415 VGKPDEAEEILFEMINNGCA-ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
            GK DEA  +  EM     A  +  TY++L+   F+      A+ + ++M         V
Sbjct: 326 AGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +++++  LC++GKL EA     ++   G  PDV+ Y+++I   C AG+V +A  L +EM
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
           +    K   D FT N +L  LCK      + +LL+S   RG  PD V+    + A     
Sbjct: 446 VGKGLKM--DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAY---- 499

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                            FK        ++ + M+++ L P  ST+  +++ LCR +R++ 
Sbjct: 500 -----------------FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKE 542

Query: 654 AINK 657
           AI+K
Sbjct: 543 AIDK 546


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 231/443 (52%), Gaps = 33/443 (7%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF------- 176
           +  AY +  LVEEA +L ++       +  + ++N++L  + + G Y RA +        
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSR-GMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQL 356

Query: 177 --------YN----------HIVNAKHM-------NILPNTLTFNLVIKTVCRLGLVDNA 211
                   YN          +I+ A+ +        +LP+ ++F+ +I  + R G +  A
Sbjct: 357 GLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQA 416

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           +  FREM      PD   Y  L+DG C+   L +A+ + DEM   GCF   VT+N  +NG
Sbjct: 417 LMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNG 476

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK      A  L + M  +G +P+  T+ TLI G C  GN+DKA++L + MV +   P+
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
           +VTY T+I+G  K G       +   M  +    +   Y T+++G    G   +A+ L  
Sbjct: 537 KVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCD 596

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           QM+EKG +PN V  + LI G CR G   +A E L +MI+NG   ++F+Y++L+ G+ +  
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              KA  +  +M K    +N + Y+++++G C +GK++EA  V  +M+  G  PD   YS
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716

Query: 512 SMIHGLCNAGSVEEALKLFNEML 534
           S+I+G  +  +++EA +  +EML
Sbjct: 717 SLINGHVSQDNMKEAFRFHDEML 739



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 222/429 (51%), Gaps = 7/429 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + ++N+++N   +EGL   A +  N   +++ M   P  LT+N ++  +C++G  D A  
Sbjct: 292 IVTYNTLINAYCREGLVEEAFQLLNSF-SSRGME--PGLLTYNAILYGLCKIGKYDRAKD 348

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  EM      P+  TY TL+  +C+ + + EA  + DEM   G  P  V+F+ LI  L 
Sbjct: 349 VLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLA 408

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           +NG L +A      M   G +P+ V Y  LI G C  G L  A+ + D M+A  C  + V
Sbjct: 409 RNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVV 468

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T +NGL K     D   +   M ER    + Y ++TLI G  K+G  + A+ L++ M
Sbjct: 469 TYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAM 528

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +    KP+ V Y+ LIDG C+ G+   A+E+  +MI      +  +Y +++ GF  SG  
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ +   M +     N V  + LI G C  G + +A    ++M+S G  PD  +Y+++
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           I G     ++E+A  L NEM   E +  Q ++ TYN++LN  C +  +  +  +L  M++
Sbjct: 649 IDGYLKEANLEKAFILINEM---EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705

Query: 573 RGCDPDLVT 581
            G +PD  T
Sbjct: 706 IGINPDGAT 714



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 232/440 (52%), Gaps = 6/440 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++ + N +L  +++ G    A E Y  +V      I  N  T N+++  +C+    +N +
Sbjct: 221 SINACNKLLGGLVRTGWVDLAWEIYGEVVRG---GIELNVYTLNIMVNALCKDRKFENVM 277

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
               +M  +    DI TY TL++  C+E  ++EA  LL+     G  P  +T+N ++ GL
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G+  RA  ++  M   G  PN  TYNTL+  +C + N+ +A  + D M     +P+ 
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           V++ ++I  L + G           ME      +  IY+ LI G  + G   DA+K+  +
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDE 457

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +GC  + V Y+  ++GLC+     +A+ +  EM+  G   + +T+++L++G+ + G 
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             KA+ +++ M + N   ++V Y+ LI G C+ G++  A+ +W  M+ +   PD ++Y +
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT 577

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +++G C++G + EAL L ++M  LE   +P++ T N L+   C+  ++  + + L+ M+ 
Sbjct: 578 VLNGFCSSGLLPEALNLCDQM--LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMIS 635

Query: 573 RGCDPDLVTCNIFLTA-LKE 591
            G  PD  + N  +   LKE
Sbjct: 636 NGIIPDSFSYNTLIDGYLKE 655



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 123/512 (24%), Positives = 225/512 (43%), Gaps = 53/512 (10%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           L ++L+++T  +   +    + F+ +  +     I     L+ GL +   +D A  +  E
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +   G      T N+++N LCK+ +       + +M  KG   + VTYNTLI+  C +G 
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY-- 370
           +++A  LL+   +    P  +TY  I+ GL K+G+      VL+ M +     N   Y  
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 371 ---------------------------------STLISGLFKEGKAEDAMKLWKQMMEKG 397
                                            S+LI  L + G    A+  +++M   G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P+ V+Y+ LIDG CR G   +A ++  EM+  GC  +  TY++ + G  +      A 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            ++ +M +   V +   ++ LI G C+DG + +A  ++  M+    KPD V Y+++I G 
Sbjct: 488 MLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGF 547

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C AG +  A +L+++M  +     PD  +Y  +LN  C    +  +++L + M+++G  P
Sbjct: 548 CKAGEMGRAKELWDDM--IRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRP 605

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFL---------------NELAIRLFKRQRTSGGFKI 622
           +LVTCN  +       + P+   ++L               N L     K       F +
Sbjct: 606 NLVTCNTLIKGYCRSGDMPK-AYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFIL 664

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  M ++ L     T+  ++   C   ++Q A
Sbjct: 665 INEMEKRGLQFNIITYNLILNGFCAEGKMQEA 696



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 122/248 (49%), Gaps = 4/248 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI+ Y   G+      +   M R      + ++  +   + KA  +  A  L+  M
Sbjct: 504 TFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDM 563

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +      + S+ +VLN     GL   AL   + ++      I PN +T N +IK  CR
Sbjct: 564 IRKDIIPDHI-SYGTVLNGFCSSGLLPEALNLCDQMLEK---GIRPNLVTCNTLIKGYCR 619

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A +   +M      PD ++Y TL+DG  KE  L++A +L++EM+  G     +T
Sbjct: 620 SGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIIT 679

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N+++NG C  G++  A +++  M   G  P+  TY++LI+G   + N+ +A    D M+
Sbjct: 680 YNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEML 739

Query: 325 ASKCMPNE 332
               +P++
Sbjct: 740 QRGLVPDD 747



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 113/274 (41%), Gaps = 42/274 (15%)

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN-----------------AFTYS 441
           K +++  SA++  L R  +  EA+  +  M+     +                     Y 
Sbjct: 132 KHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSRVKVVESLISTCFYFGSVGLIYD 191

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            L++ + ++ K  +  E ++ + +     +    + L+ GL   G +  A  ++ +++  
Sbjct: 192 LLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRG 251

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNI 560
           G + +V   + M++ LC     E  +   ++M   E K    D+ TYN L+NA C++  +
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDM---EGKGVFADIVTYNTLINAYCREGLV 308

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  LLNS   RG +P L+T N  L  L  K+       D L E               
Sbjct: 309 EEAFQLLNSFSSRGMEPGLLTYNAILYGLC-KIGKYDRAKDVLIE--------------- 352

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                MLQ  L+P  +T+  ++ E+CR   I  A
Sbjct: 353 -----MLQLGLTPNAATYNTLLVEICRRDNILEA 381


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/499 (28%), Positives = 246/499 (49%), Gaps = 7/499 (1%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D T+  LI  +   G   +    L +M      +    +  +   + K   +  A+  F 
Sbjct: 401 DVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFD 460

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+D+   K TV S+ S+++    +G  H A   Y+ +       I PNT TF  +I  +
Sbjct: 461 EMIDK-GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGK---GIAPNTYTFTTLISAL 516

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            R   + +A +LF EM  +N  P+  TY  +++G CKE    +A  LL++M   G  P  
Sbjct: 517 FRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDT 576

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+  LI+ LC  G +  A K +D++  +    NE+ Y+ L+HG C +G L  A+ +   
Sbjct: 577 YTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCRE 636

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MV      + V Y  +I+G +K         +L +M +++   ++ IY+++I G  K G 
Sbjct: 637 MVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGS 696

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A  +W  M+++GC PN V Y+ LI+ LC+ G  D+AE +  EM+ +    N  TY  
Sbjct: 697 VKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCC 756

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
            +      G   KAV++  DM K   + N V Y++L+ G C+ G++ EA  +  +M+   
Sbjct: 757 FLDHLAREGSMEKAVQLHNDMLKG-LLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNA 815

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             PD + YS++I+  C  G+++ A++ ++ ML      +PD   YN L+   C    +  
Sbjct: 816 IFPDCITYSTIIYQCCRRGNLDGAIEFWDTML--NKGLKPDTLAYNFLIYGCCIAGELGK 873

Query: 563 SIDLLNSMMDRGCDPDLVT 581
           + +L + M+ RG  P+  T
Sbjct: 874 AFELRDDMIRRGVKPNQAT 892



 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 146/512 (28%), Positives = 244/512 (47%), Gaps = 28/512 (5%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +EA  LF  M ++  C   V +++ +++   + G    A+ F   ++ A    I      
Sbjct: 383 DEAELLFKEMGEKGLCANDV-TYSILIDSFCRRGKLDTAIHFLGKMIMA---GIKITVYP 438

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I   C+LG +  A+  F EM  +  +P + +Y +L+ G C + +L EA  L  EM 
Sbjct: 439 YNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMT 498

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P   TF  LI+ L +   +  A +L D M  +  +PNEVTYN +I G C +GN  
Sbjct: 499 GKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTV 558

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA  LL++MV    +P+  TY  +I+ L   GR  +  + +  +    F +NE  YS L+
Sbjct: 559 KAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALL 618

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G  KEG+  DA+ + ++M+++G   + V Y+ LIDG  +         +L  M +    
Sbjct: 619 HGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLR 678

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +   Y+S++ G+ ++G   KA  IW  M    C  N V Y+ LI+ LC+ G + +A ++
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELL 738

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           W +ML     P+ V Y   +  L   GS+E+A++L N+ML        +  +YNIL+   
Sbjct: 739 WKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML---KGLLANTVSYNILVRGF 795

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           CK   +  +  LL+ M+D    PD +T                      + +  +  +R 
Sbjct: 796 CKLGRVEEATKLLDEMIDNAIFPDCIT---------------------YSTIIYQCCRRG 834

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              G  +  + ML K L P T  +  ++   C
Sbjct: 835 NLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCC 866



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 244/505 (48%), Gaps = 19/505 (3%)

Query: 167 EGLYHRA--LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-C 223
           EGL  +   ++ ++ +   K +  +P+   +N +I ++C+ G  D A  LF+EM  +  C
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
             D+ TY  L+D  C+  +LD A+  L +M + G   T   +N LING CK G L  A  
Sbjct: 399 ANDV-TYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVS 457

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
             D M  KG  P  V+Y +LI G C KG L +A  L   M      PN  T+ T+I+ L 
Sbjct: 458 FFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALF 517

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           +  R  D  R+   M E+    NE  Y+ +I G  KEG    A +L  QM++KG  P+T 
Sbjct: 518 RANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTY 577

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y  LI  LC  G+  EA++ + ++       N   YS+L+ G+ + G+   A+ + ++M
Sbjct: 578 TYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREM 637

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            K     + VCY+VLI G  ++        +   M  +  +PD V Y+SMI G   AGSV
Sbjct: 638 VKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSV 697

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           ++A  +++ M  ++    P++ TY  L+N LCK   +  +  L   M+     P+ VT  
Sbjct: 698 KKAFGIWDIM--IDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYC 755

Query: 584 IFLTALKEK---LEAPQDGTDFLNEL---------AIRLF-KRQRTSGGFKIVEVMLQKF 630
            FL  L  +    +A Q   D L  L          +R F K  R     K+++ M+   
Sbjct: 756 CFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNA 815

Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
           + P   T+  ++ + CR   +  AI
Sbjct: 816 IFPDCITYSTIIYQCCRRGNLDGAI 840



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 232/478 (48%), Gaps = 16/478 (3%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N + +N++I  +C+   V  A+++   +  +       TYCTL+ GLCK    +    ++
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVM 319

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM   G  PT    + L+ GL + G++  A  LV+ +   G +P+   YN LI+ LC  
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKD 379

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G  D+A  L   M       N+VTY  +I+   + G+       L  M      +  Y Y
Sbjct: 380 GKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPY 439

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           ++LI+G  K G    A+  + +M++KG KP  V Y++LI G C  GK  EA  +  EM  
Sbjct: 440 NSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTG 499

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G A N +T+++L+   F + +   A  ++ +M + N + NEV Y+V+I G C++G   +
Sbjct: 500 KGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVK 559

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  QM+ +G  PD   Y  +I  LC+ G V EA K  +++       + +   Y+ L
Sbjct: 560 AFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL--HREHFKLNEMCYSAL 617

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA-LKEKLEAPQDG-TDFLNELAI 608
           L+  CK+  +  ++ +   M+ RG D DLV   + +   +KE+  +   G    +++  +
Sbjct: 618 LHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRL 677

Query: 609 RLFKRQRTS------------GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           R  K   TS              F I ++M+ +  +P   T+  ++ ELC+   +  A
Sbjct: 678 RPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKA 735



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 133/462 (28%), Positives = 218/462 (47%), Gaps = 14/462 (3%)

Query: 57  GNAKSEQPFSDEIFNS--TPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKR 114
           GN  +   F DE+ +    P + SY        SLI  Y N G       + + M  +  
Sbjct: 450 GNLSAAVSFFDEMIDKGLKPTVVSYT-------SLISGYCNKGKLHEAFRLYHEMTGKGI 502

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
                +F  +  A  +A+ + +A RLF  M+++      V ++N ++    +EG   +A 
Sbjct: 503 APNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEV-TYNVMIEGHCKEGNTVKAF 561

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E  N +V      ++P+T T+  +I ++C  G V  A +   ++   + + +   Y  L+
Sbjct: 562 ELLNQMVQK---GLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALL 618

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            G CKE RL +A+ +  EM   G     V + VLI+G  K  +      L+ NM  +   
Sbjct: 619 HGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLR 678

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P++V Y ++I G    G++ KA  + D M+   C PN VTY T+IN L K G       +
Sbjct: 679 PDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELL 738

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M       N   Y   +  L +EG  E A++L   M+ KG   NTV Y+ L+ G C+
Sbjct: 739 WKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCK 797

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +G+ +EA ++L EMI+N    +  TYS+++      G    A+E W  M       + + 
Sbjct: 798 LGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLA 857

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           Y+ LI+G C  G+L +A  +   M+ RG KP+   + S+ HG
Sbjct: 858 YNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHG 899



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/509 (23%), Positives = 214/509 (42%), Gaps = 77/509 (15%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-CEP------ 225
           AL F+N +    H N   +T++F ++I  +    L   A  L + + +R   +P      
Sbjct: 88  ALRFFNFL--GLHKNFNHSTMSFCILIHALVNANLFWPASSLLQTLLLRGGLDPREVFEA 145

Query: 226 --DIYTYCTLMDGL---------CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
             D +  C  +  L          +E R+ ++VL+   M+     P   T   ++NGL K
Sbjct: 146 LLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAK 205

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
              +     L   +   G  P+   Y  +I   C   N  KA  ++ RM +S        
Sbjct: 206 IRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSD------- 258

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
                                         +N  +Y+ LI GL K  +  +A+++   ++
Sbjct: 259 ------------------------------LNVVVYNVLIHGLCKNKRVWEAVEIKNGLI 288

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           +KG   + V Y  L+ GLC+V + +    ++ EMI  G        SSL++G    GK  
Sbjct: 289 QKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVV 348

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A ++   + K   + +   Y+ LI+ LC+DGK  EA +++ +M  +G   + V YS +I
Sbjct: 349 DAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILI 408

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
              C  G ++ A+    +M+    K    V+ YN L+N  CK  N+S ++   + M+D+G
Sbjct: 409 DSFCRRGKLDTAIHFLGKMIMAGIKIT--VYPYNSLINGHCKLGNLSAAVSFFDEMIDKG 466

Query: 575 CDPDLVTCNIFLTAL--KEKLE--------------APQDGTDFLNELAIRLFKRQRTSG 618
             P +V+    ++    K KL               AP   T     L   LF+  R + 
Sbjct: 467 LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYT--FTTLISALFRANRMTD 524

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            F++ + ML++ + P   T+  +++  C+
Sbjct: 525 AFRLFDEMLEQNMMPNEVTYNVMIEGHCK 553



 Score = 40.8 bits (94), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/180 (18%), Positives = 76/180 (42%), Gaps = 25/180 (13%)

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           + +LI    ++ ++ ++ +++  M      P V     +++GL     V+  L LF E+L
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            +  +  PD++ Y  ++ + C+  N + + +++  M     D ++V  N+ +  L     
Sbjct: 221 SMGIR--PDIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVLIHGL----- 271

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                            K +R     +I   ++QK L+    T+  +V  LC+ +  +  
Sbjct: 272 ----------------CKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVG 315


>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
 gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 257/509 (50%), Gaps = 43/509 (8%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           + F  +  +Y +A  +  A+++  TM+ +   +  +   N+ ++V++   +  +AL F  
Sbjct: 119 QDFCCVMVSYSRAGKLRNAMQVL-TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLE 177

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +   + + I+PN +T+N +IK  C L  V++A++L  EMP++ C PD  +Y T+M  LC
Sbjct: 178 RM---QLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLC 234

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN----------------------- 275
           K  R+ E + ++++M+        VT+N LI+ LCK+                       
Sbjct: 235 KNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKV 294

Query: 276 ------------GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
                       G + +A ++V+ MF +GC+P+ VTY  +I+G    G + +A  +L +M
Sbjct: 295 GYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQM 354

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
               C PN V+Y   + GL + G + +   ++ + EE+ +  N   YS ++ G  +EGK 
Sbjct: 355 YKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKL 414

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            DA  + ++M+ KG  P  V  + L+  LCR+G+ DEA++ + E +N GCA NA  ++++
Sbjct: 415 SDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTV 474

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +  F +      A+ +  DM  +N   + V Y+ +I  L + G++ EA  +  +ML +G 
Sbjct: 475 IHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGI 534

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P  V Y ++IH     G VE+ L L ++ML      Q     +N ++  LC   N+  +
Sbjct: 535 DPTPVTYRTVIHRYGQIGRVEDLLNLLDKML----TRQECRTAFNQVIEKLCTFGNLEAA 590

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
             LL  ++      D  TC++ + +   K
Sbjct: 591 DKLLGKVLRTASRIDANTCHVLMESYLRK 619



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 232/462 (50%), Gaps = 23/462 (4%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           F  V+ +  R G + NA+Q+   M     EP++    T +  L   N L++A+  L+ MQ
Sbjct: 121 FCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQ 180

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           + G  P  VT+N LI G C    +  A +L+  M LKGC P++V+Y T++  LC    + 
Sbjct: 181 LLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIR 240

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           + + ++++M  +K + ++VTY T+I+ L K   A +  + L   ++R F V++  YS ++
Sbjct: 241 EVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIV 300

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
               KEG+ + A ++  +M  +GC P+ V Y+A+I+G  + G+  +A ++L +M  +GC 
Sbjct: 301 DSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCK 360

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  +Y++ +KG  + G   +A E+ K   +     N + YSV++HG   +GKL +A  V
Sbjct: 361 PNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDV 420

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M+ +G  P  V  + ++  LC  G V+EA K   E  CL      +   +  +++  
Sbjct: 421 VREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEE--CLNMGCAVNAVNFTTVIHRF 478

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           C+Q +I  ++ LL+ M      PD VT    + AL                      K+ 
Sbjct: 479 CQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALG---------------------KKG 517

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           R     ++   ML+K + P   T+  V+    +  R++  +N
Sbjct: 518 RIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLN 559



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 179/364 (49%), Gaps = 2/364 (0%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D   YC ++D L K      A  +L  M   G   TP  F  ++    + G+L  A +++
Sbjct: 82  DPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVL 141

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M   G  PN +  NT IH L +   L+KA+  L+RM     MPN VTY  +I G   L
Sbjct: 142 TMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDL 201

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
            R  D   ++  M  +    ++  Y T++  L K  +  + M + ++M +     + V Y
Sbjct: 202 HRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTY 261

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + LI  LC+    DEA + L E    G   +   YS+++  + + G+  +A EI  +M  
Sbjct: 262 NTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFT 321

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
             C+ + V Y+ +I+G  + G++ +AR +  QM   GCKP+ V+Y++ + GLC  G+  E
Sbjct: 322 RGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSE 381

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A ++       E    P+  TY+++++   ++  +S + D++  M+ +G  P  V  N+ 
Sbjct: 382 AREMMKA--SEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLL 439

Query: 586 LTAL 589
           L +L
Sbjct: 440 LQSL 443



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 199/476 (41%), Gaps = 74/476 (15%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K Y   H VE+A+ L   M  +  C     S+ +V+  + +     R  E  + I   
Sbjct: 194 LIKGYCDLHRVEDAMELISEMPLK-GCSPDKVSYYTVMGFLCKN---RRIREVMDVIEKM 249

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   +L + +T+N +I  +C+    D A+Q  RE   R  + D   Y  ++D  CKE R+
Sbjct: 250 EDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRM 309

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A  +++EM   GC P  VT+  +ING  + GE+G+A K++  M+  GC PN V+Y   
Sbjct: 310 DQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAF 369

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           + GLC KGN  +A  ++         PN +TY  +++G  + G+  D   V+  M  + F
Sbjct: 370 LKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGF 429

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC------------------------- 398
                  + L+  L + G+ ++A K  ++ +  GC                         
Sbjct: 430 FPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALS 489

Query: 399 ----------KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
                      P+ V Y+ +ID L + G+ +EA E+  +M+  G      TY +++  + 
Sbjct: 490 LLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYG 549

Query: 449 ESGKGHKAVEIWKDM-AKNNC--VYNEV-------------------------------C 474
           + G+    + +   M  +  C   +N+V                               C
Sbjct: 550 QIGRVEDLLNLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTC 609

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           + VL+      G    A  V  +M SR   PD+     +   L   G  EEA  LF
Sbjct: 610 H-VLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLF 664



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 117/243 (48%), Gaps = 9/243 (3%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
            N +L  + + G    A +F    +N   M    N + F  VI   C+   ++ A+ L  
Sbjct: 436 INLLLQSLCRIGRVDEAKKFMEECLN---MGCAVNAVNFTTVIHRFCQQDDIEAALSLLD 492

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M + N  PD  TY T++D L K+ R++EA  L  +M   G  PTPVT+  +I+   + G
Sbjct: 493 DMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIH---RYG 549

Query: 277 ELGRAAKLVDNMFLKGCLPNE--VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
           ++GR   L+ N+  K     E    +N +I  LC  GNL+ A  LL +++ +    +  T
Sbjct: 550 QIGRVEDLL-NLLDKMLTRQECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANT 608

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
              ++   ++ G  +   +V   M  R    +  +   +   L +EGK+E+A  L+ + +
Sbjct: 609 CHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFV 668

Query: 395 EKG 397
           E+G
Sbjct: 669 ERG 671



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/271 (20%), Positives = 111/271 (40%), Gaps = 37/271 (13%)

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
           ++  +  +Y  ++  L K    + A ++ + M+ +G +     +  ++    R GK   A
Sbjct: 78  RYRHDPIVYCVMLDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNA 137

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            ++L  M   G   N    ++ +     +    KA+   + M     + N V Y+ LI G
Sbjct: 138 MQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKG 197

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVA-------------------------------- 509
            C+  ++ +A  + ++M  +GC PD V+                                
Sbjct: 198 YCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLAD 257

Query: 510 ---YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
              Y+++IH LC     +EAL+   E    +   Q D   Y+ ++++ CK+  +  + ++
Sbjct: 258 QVTYNTLIHMLCKHQHADEALQFLRE--AQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEI 315

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
           +N M  RGC PD+VT    +    +  E  Q
Sbjct: 316 VNEMFTRGCIPDVVTYTAIINGFSQAGEVGQ 346


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 210/396 (53%), Gaps = 5/396 (1%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT ++N+++K +C  G + +A QLF EM      PD+ TY  ++ G C  + L+ A+ LL
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM   G    PV +  +I  LC  G++  A ++V++M + G + +   + T++ G C K
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G+L  A +  D M       + VTY  +INGL + G   +  RVL  ME++   V+   Y
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI G  K GK  +A  +  +M++K   PN V Y+AL DGLC+ G    A E+L EM +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N FTY+SL+ G  ++G   +A+    DM +     +   Y+ +I  LC+  +L  
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +ML +G KP +V Y+ +++G C +G VE   +L   M  LE    P+  TYN L
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWM--LEKNIHPNTTTYNSL 606

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +   C + N+  + ++   M+ +   P+  T NI +
Sbjct: 607 MKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 215/412 (52%), Gaps = 32/412 (7%)

Query: 243 LDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           LDEAV L  E+ + + C     ++N+L+  LC  G +  A +L D M      P+ VTY 
Sbjct: 238 LDEAVQLFQELPEKNTC-----SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYG 289

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            ++HG C    L+ A+ LL  M A     N V Y ++I  L   G+  D  RV+  M   
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
              ++  +++T++SG  ++G    A   + +M ++G   + V Y+ALI+GLCR G+  EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           E +L EM + G   +A TY+ L+ G+ + GK  +A  +   M +     N V Y+ L  G
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC+ G +  A  +  +M S+G + ++  Y+S+I+GLC AG++E+A++   +M   E   +
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD--EAGLK 527

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PDV+TY  ++ ALC+   +  +  LL  M+D+G  P +VT N+ +               
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG------------- 574

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                        R  GG +++E ML+K + P T+T+  ++++ C  K +++
Sbjct: 575 --------FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 230/484 (47%), Gaps = 9/484 (1%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           L++    +G  K    +   M     VV   ++  +   Y     +E AI+L   M    
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMASPPDVV---TYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
                V ++ SV+ ++  EG    A+     +V   H  +L +   F  V+   CR G +
Sbjct: 316 LELNPV-AYTSVIALLCDEGQVSDAVRVVEDMV--MHGVVL-DAAVFTTVMSGFCRKGDL 371

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
             A   F EM  R    D  TY  L++GLC+   L EA  +L EM+  G     VT+ VL
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+G CK G++  A  + + M  K   PN VTY  L  GLC +G++  A  LL  M +   
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             N  TY ++INGL K G      R ++ M+E     + Y Y+T+I  L +  + + A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L ++M++KG KP  V Y+ L++G C  G+ +  + +L  M+      N  TY+SLMK + 
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
                    EI+K M     V NE  Y++LI G C+   ++EA    ++M+ +G +    
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +Y+++I  L       EA +LF +M      ++PDV  YN  ++    + N+  ++ L +
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV--YNFYIDLSFNEDNLESTLALCD 729

Query: 569 SMMD 572
            +++
Sbjct: 730 ELVE 733



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 30/271 (11%)

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A++L++++ EK    NT  Y+ L+  LC  G+  +A ++  EM       +  TY  +
Sbjct: 239 DEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIM 291

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G+    +   A+++  +MA      N V Y+ +I  LC++G++ +A  V   M+  G 
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             D   +++++ G C  G +  A   F+EM   +     D  TY  L+N LC+   +  +
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ--KRGLAADGVTYTALINGLCRAGELKEA 409

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
             +L  M D+G D D VT  + +           DG            K  + +  F + 
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLI-----------DG----------YCKVGKMTEAFLVH 448

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M+QK ++P   T+  +   LC+   + AA
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/418 (32%), Positives = 226/418 (54%), Gaps = 10/418 (2%)

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
           L+H AL+F          N+LP+  T N ++  + R      A  ++R M   +  P   
Sbjct: 61  LFHSALDF----------NLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFG 110

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           +   L++      +      ++  +   G        N+++ GLC+NG +  A  L+  M
Sbjct: 111 SLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREM 170

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             K   P+ V+YNTLI+GLC    L +AV LL  M A+ C PN VT  T+++GL K GR 
Sbjct: 171 GRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRM 230

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +   +L +M+++ F  +  +Y TLISG    G  +   +L+ +M+ KG   N V YS L
Sbjct: 231 DEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCL 290

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           + GLCR+G+  EA  +L  M  +G   +  TY+ L+ G  + G+   A+++   M +   
Sbjct: 291 VHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGE 350

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + V Y+VL+ GLC++G + +A  +   M+ +G K DVV Y++++ GLC+ G V+EALK
Sbjct: 351 EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALK 410

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           LFN M   E   +P+VFT+N+L+  LCK+  ++ ++ +   M+ +G   +LVT N+ L
Sbjct: 411 LFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLL 468



 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 173/613 (28%), Positives = 268/613 (43%), Gaps = 152/613 (24%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP----- 190
           EA+ LFH+ +D F+   +  + N +++ + +   Y  A   Y  +    H+++LP     
Sbjct: 57  EAVSLFHSALD-FNLLPSWATCNFLVDALARSRNYGLAFSVYRRMT---HVDVLPSFGSL 112

Query: 191 ------------------------------NTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
                                         N    N+V+K +CR G V  A+ L REM  
Sbjct: 113 SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR 172

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           ++  PDI +Y TL++GLCK  +L EAV LL EM+  GCFP  VT   L++GLCK+G +  
Sbjct: 173 KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDE 232

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A +L++ M  KG   + V Y TLI G C  GNLD+   L D M+      N VTY  +++
Sbjct: 233 AMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVH 292

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE---------------- 384
           GL +LG+  +   VL +M E   H +   Y+ LI GL K+G+A                 
Sbjct: 293 GLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 352

Query: 385 -------------------DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
                              DA K+ + M+EKG K + V Y+ L+ GLC  GK DEA ++ 
Sbjct: 353 SNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLF 412

Query: 426 FEMINN-------------------------------------GCAANAFTYSSLMKGFF 448
             M +N                                     G   N  TY+ L+ G  
Sbjct: 413 NSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCL 472

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG--------------------------- 481
           ++GK  +A+E+WK +     V N   YS+LI G                           
Sbjct: 473 KAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALF 532

Query: 482 --------LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
                   LC++G L +A+ ++ +M +  C+PD++++++MI G   AG  +   +L  +M
Sbjct: 533 DYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKEL--QM 590

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             +E   +PD  T++ L+N L K   +  +   L  M+  G  PD +  +  L  L  K 
Sbjct: 591 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSK- 649

Query: 594 EAPQDGTDFLNEL 606
               D T+ +N L
Sbjct: 650 ---GDTTEIINLL 659



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 189/390 (48%), Gaps = 27/390 (6%)

Query: 269 INGLCK--NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +  LC+  N +   A  L  +      LP+  T N L+  L    N   A S+  RM   
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
             +P+  +   +I       +   G  V+  + +R F VN +I + ++ GL + G   +A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           M L ++M  K   P+ V Y+ LI+GLC+  K  EA  +L EM   GC  N+ T ++LM G
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             + G+  +A+E+ + M K     + V Y  LI G C +G L   + ++ +ML +G   +
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISAN 283

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           VV YS ++HGLC  G  +EA  + N M   E    PDV TY  L++ LCK    +H++DL
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAM--AEHGIHPDVVTYTGLIDGLCKDGRATHAMDL 341

Query: 567 LNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
           LN M+++G +P  VT N+ L+ L KE L                          FKI+ +
Sbjct: 342 LNLMVEKGEEPSNVTYNVLLSGLCKEGL----------------------VIDAFKILRM 379

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           M++K       T+  +++ LC   ++  A+
Sbjct: 380 MIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 225/495 (45%), Gaps = 43/495 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA+ L   M  +      V  + ++++     G   R  E ++ ++      I  N +
Sbjct: 230 MDEAMELLEAMKKKGF-DADVVLYGTLISGFCNNGNLDRGKELFDEMLGK---GISANVV 285

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T++ ++  +CRLG    A  +   M      PD+ TY  L+DGLCK+ R   A+ LL+ M
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345

Query: 254 QVDGCFPTPVTFNVLINGLCKNG-------------ELGRAAKLVD-NMFLKG------- 292
              G  P+ VT+NVL++GLCK G             E G+ A +V  N  +KG       
Sbjct: 346 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 405

Query: 293 ---------------CL-PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
                          CL PN  T+N LI GLC +G L KAV +  +MV      N VTY 
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 465

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++ G +K G+  +   +   + +  F  N + YS LI G  K      A  L+ +M   
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTH 525

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P    Y+ L+  LC+ G  ++A+ +  EM N  C  +  ++++++ G  ++G     
Sbjct: 526 GLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFV 585

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            E+   M +     + + +S LI+ L + G+L EA+    +M++ G  PD + Y S++ G
Sbjct: 586 KELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           L + G   E + L ++M      +  D    + +L  LC        ++LL +      +
Sbjct: 646 LSSKGDTTEIINLLHQM--AAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSE 703

Query: 577 PDLVTCNIFLTALKE 591
              ++CN  L  L +
Sbjct: 704 GASISCNELLMQLHQ 718



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 185/401 (46%), Gaps = 6/401 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L+      G +K    VL  M          ++  +     K      A+ L + M
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V++      V ++N +L+ + +EGL   A +    ++         + +T+N ++K +C 
Sbjct: 346 VEKGEEPSNV-TYNVLLSGLCKEGLVIDAFKILRMMIEKGKK---ADVVTYNTLMKGLCD 401

Query: 205 LGLVDNAIQLFREM-PVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            G VD A++LF  M    NC EP+++T+  L+ GLCKE RL +AV +  +M   G     
Sbjct: 402 KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNL 461

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N+L+ G  K G++  A +L   +   G +PN  TY+ LI G C    L+ A  L   
Sbjct: 462 VTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCE 521

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M      P    Y T++  L K G       +   M       +   ++T+I G  K G 
Sbjct: 522 MRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGD 581

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +   +L  +M+E G +P+ + +S LI+ L ++G+ DEA+  L  M+ +G   +A  Y S
Sbjct: 582 FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDS 641

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           L+KG    G   + + +   MA    V +    S ++  LC
Sbjct: 642 LLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 164/604 (27%), Positives = 280/604 (46%), Gaps = 64/604 (10%)

Query: 87  YSL-IQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           YSL I+     GD      +   M  +  V    ++  I     +A  + EA   F  M 
Sbjct: 266 YSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM- 324

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            +   K    + +++++  ++EG     L   + +V+     I  N +T+N++I  +C+ 
Sbjct: 325 QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSC---GIPINLITYNVLIHGLCKF 381

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G ++ A ++ + M    C+P+  T+C L++G C+E+ +  A+ LLDEM+     P+ V++
Sbjct: 382 GKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSY 441

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             +INGLC   +L  A KL++ M   G  PN V Y+ LI     +G +++A  LLD M  
Sbjct: 442 GAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSC 501

Query: 326 S-------------KCM----------------------PNEVTYGTIINGLVKLGRAVD 350
           S              C+                      P+ VT+G  I G  K G+  +
Sbjct: 502 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 561

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
            A+    M +     N  +Y+ LI+G FK G   +A+ +++++   G  P+    SA I 
Sbjct: 562 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIH 621

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GL + G+  EA ++  E+   G   + FTYSSL+ GF + G+  KA E+  +M       
Sbjct: 622 GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAP 681

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N   Y+ L+ GLC+ G ++ AR ++  M  +G +PD V YS+MI G C + +V EA  LF
Sbjct: 682 NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLF 741

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           +EM       QP  F YN L++  CK+ ++  +++L   M+ +G          F T L 
Sbjct: 742 HEM--PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG----------FATTLS 789

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                        N L     K  +     ++ + M+ K + P   T+  V+   C+  +
Sbjct: 790 ------------FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGK 837

Query: 651 IQAA 654
           ++ A
Sbjct: 838 MEEA 841



 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 151/502 (30%), Positives = 238/502 (47%), Gaps = 58/502 (11%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN   ++LVI+ +C++G +D A++L R M  +   P+ YTY  +  GLC+  R++EA L 
Sbjct: 261 PNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT 320

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            +EMQ  G  P     + LI+G  + G++    ++ D M   G   N +TYN LIHGLC 
Sbjct: 321 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 380

Query: 310 KGNLDKAVSLLDRMVASKCMPNE-----------------------------------VT 334
            G ++KA  +L  MV   C PN                                    V+
Sbjct: 381 FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 440

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           YG +INGL          ++L  M       N  +YS LI     EG+ E+A +L   M 
Sbjct: 441 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMS 500

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
             G  P+   Y+A+I  L + GK +EA   L E+   G   +A T+ + + G+ ++GK  
Sbjct: 501 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 560

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A + + +M  +  + N   Y+VLI+G  + G L EA  ++ ++ + G  PDV   S+ I
Sbjct: 561 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFI 620

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           HGL   G V+EALK+F+E+   E    PDVFTY+ L++  CKQ  +  + +L + M  +G
Sbjct: 621 HGLLKNGRVQEALKVFSEL--KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 678

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             P     NIF+                 N L   L K        K+ + M +K L P 
Sbjct: 679 IAP-----NIFI----------------YNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 717

Query: 635 TSTWERVVQELCRPKRIQAAIN 656
           + T+  ++   C+ + +  A +
Sbjct: 718 SVTYSTMIDGYCKSENVAEAFS 739



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 230/426 (53%), Gaps = 6/426 (1%)

Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP 225
           + G    A ++++ +++     ++PN   + ++I    + G +  A+ +FR +      P
Sbjct: 555 KTGKMTEAAKYFDEMLDH---GLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLP 611

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D+ T    + GL K  R+ EA+ +  E++  G  P   T++ LI+G CK GE+ +A +L 
Sbjct: 612 DVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELH 671

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
           D M LKG  PN   YN L+ GLC  G++ +A  L D M      P+ VTY T+I+G  K 
Sbjct: 672 DEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKS 731

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
               +   +   M  +    + ++Y+ L+ G  KEG  E AM L+++M++KG    T+ +
Sbjct: 732 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSF 790

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + LIDG C+  K  EA ++  EMI      +  TY++++    ++GK  +A  ++K+M +
Sbjct: 791 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 850

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
            N + + V Y+ L++G  + G+  E   ++ +M+++G KPD V Y  +I+  C   ++ E
Sbjct: 851 RNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVE 910

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A KL +E++     ++  +  +++L+ ALCK+ +++ +  LL+ M + G  P L  CN  
Sbjct: 911 AFKLRDEVVGKGMLTKGTI--HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTL 968

Query: 586 LTALKE 591
           + +  E
Sbjct: 969 VRSFHE 974



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 159/622 (25%), Positives = 278/622 (44%), Gaps = 44/622 (7%)

Query: 67  DEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIF 123
           D  + S  ++G  Q  DS F  L     NS  F     VL +M R       +L+ S +F
Sbjct: 91  DFFYWSQSQMGVPQFLDS-FSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILD-SVLF 148

Query: 124 IFKAYG---------------KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
            F+ YG               +  +++EA  +F    ++      ++  NS+L  +++ G
Sbjct: 149 WFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRC-NSLLKDLLKCG 207

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
           +     + YN +++AK M    +  T+  ++  +C+ G +  A ++  EM  +   P+ +
Sbjct: 208 MMELFWKVYNGMLDAK-MGF--DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEF 264

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
            Y  +++G+C+   +DEAV L   M   G  P   T+ ++  GLC+   +  A    + M
Sbjct: 265 IYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEM 324

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              G  P+    + LI G   +G++D+ + + D MV+     N +TY  +I+GL K G+ 
Sbjct: 325 QKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKM 384

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
              A +L  M       N   +  LI G  +E     A++L  +M ++   P+ V Y A+
Sbjct: 385 EKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAM 444

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I+GLC       A ++L +M  +G   N   YS L+  +   G+  +A  +   M+ +  
Sbjct: 445 INGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGV 504

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             +  CY+ +I  L + GK+ EA     ++  RG KPD V + + I G    G + EA K
Sbjct: 505 APDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAK 564

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL-- 586
            F+EM  L+    P+   Y +L+N   K  N+  ++ +   +   G  PD+ TC+ F+  
Sbjct: 565 YFDEM--LDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHG 622

Query: 587 --------------TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
                         + LKEK   P   T   + L     K+      F++ + M  K ++
Sbjct: 623 LLKNGRVQEALKVFSELKEKGLVPDVFT--YSSLISGFCKQGEVEKAFELHDEMCLKGIA 680

Query: 633 PQTSTWERVVQELCRPKRIQAA 654
           P    +  +V  LC+   IQ A
Sbjct: 681 PNIFIYNALVDGLCKSGDIQRA 702



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 197/401 (49%), Gaps = 5/401 (1%)

Query: 134  VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
            V+EA+++F  +  E      V +++S+++   ++G   +A E ++ +       I PN  
Sbjct: 629  VQEALKVFSEL-KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK---GIAPNIF 684

Query: 194  TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
             +N ++  +C+ G +  A +LF  MP +  EPD  TY T++DG CK   + EA  L  EM
Sbjct: 685  IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744

Query: 254  QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
               G  P    +N L++G CK G++ +A  L   M  KG     +++NTLI G C    +
Sbjct: 745  PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG-FATTLSFNTLIDGYCKSCKI 803

Query: 314  DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             +A  L   M+A + MP+ VTY T+I+   K G+  +   +   M+ER   V+   Y++L
Sbjct: 804  QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 863

Query: 374  ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
            + G  K G++ +   L+++M+ KG KP+ V Y  +I   C+     EA ++  E++  G 
Sbjct: 864  MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 923

Query: 434  AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                  +  L+    +     +A ++  +M +     +    + L+    E GK+ EA  
Sbjct: 924  LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATR 983

Query: 494  VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
            V+  + S G  PD      +++G  N    E+A  L  +++
Sbjct: 984  VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 157/348 (45%), Gaps = 13/348 (3%)

Query: 86   FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
            + +L+     SGD +    +   M  +       ++  +   Y K+  V EA  LFH M 
Sbjct: 686  YNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMP 745

Query: 146  DEFHCKRTVKSFNSVLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
                  + V+  + V N ++    +EG   +A+  +  ++          TL+FN +I  
Sbjct: 746  -----SKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG----FATTLSFNTLIDG 796

Query: 202  VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             C+   +  A QLF+EM  +   PD  TY T++D  CK  +++EA LL  EMQ       
Sbjct: 797  YCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVD 856

Query: 262  PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             VT+  L+ G  K G+      L + M  KG  P+EVTY  +I+  C + NL +A  L D
Sbjct: 857  TVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRD 916

Query: 322  RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             +V    +     +  +I  L K     + +++L  M E     +    +TL+    + G
Sbjct: 917  EVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAG 976

Query: 382  KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            K ++A ++++ +   G  P+T     L++G       ++A  ++ +++
Sbjct: 977  KMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
 gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
          Length = 735

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 253/506 (50%), Gaps = 43/506 (8%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           + F  +  +Y +A  +  A+R+   M  +  C   +   N  +NV++  G   +ALEF  
Sbjct: 162 RQFAHLMLSYSRAGKLRSAMRVLQLMQKD-GCAPDICICNMAVNVLVVAGRIDKALEFAE 220

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +   + + + P+ +T+N +IK +C    + +A+++   M    C PD  +Y T+M  LC
Sbjct: 221 RM---RRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLC 277

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL-------------------------- 272
           KE R+ +   LL+ M   G FP  VT+N+LI+GL                          
Sbjct: 278 KEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEV 337

Query: 273 ---------CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
                    C NG +  A +++  M  KGC P+ VTY+ ++ G C  G LD+A  ++  M
Sbjct: 338 GYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHM 397

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             + C PN VT+  ++NGL K+G++ +   +L   EE  +  +   YS ++ G  +EGK 
Sbjct: 398 YKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKL 457

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +++  +  QM++KG  P TV  + LI  LC   KP +A++ + +  + GC  N   ++++
Sbjct: 458 KESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTV 517

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + GF   G    A+ +  DM   N   + V Y+V++  L   GK++EA  +  +ML+RG 
Sbjct: 518 IHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGL 577

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P  V Y ++IH  C  G+VE+ L L ++ML  E  S      YN ++  LC    +S +
Sbjct: 578 HPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSS----AYNQVIEKLCAFGKLSEA 633

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +LL+ ++      D  TC+I + + 
Sbjct: 634 NNLLSKVLRTASKRDAQTCHILMDSF 659



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 235/465 (50%), Gaps = 23/465 (4%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T  F  ++ +  R G + +A+++ + M    C PDI      ++ L    R+D+A+   +
Sbjct: 161 TRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEFAE 220

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            M+  G  P  VT+N LI GLC    +  A +++ +M   GCLP++++Y T++  LC + 
Sbjct: 221 RMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEK 280

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            +    +LL+RM  +   P++VTY  +I+GL K G A +    L   E ++F V+E  YS
Sbjct: 281 RVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYS 340

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
             +      G+  +A ++  +M+ KGC+P+ V YSA++DG CR+G+ D+A +++  M  N
Sbjct: 341 ATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKN 400

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           GC  N  T+++L+ G  + GK  +A E+     +     + + YSV++HG   +GKL+E+
Sbjct: 401 GCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKES 460

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             V  QML +G  P  V  + +IH LCN     +A     +  C       +V  +  ++
Sbjct: 461 CDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQ--CQSKGCFINVVNFTTVI 518

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           +   +Q ++  ++ LL+ M      PD+VT  + + AL  K +                 
Sbjct: 519 HGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKM---------------- 562

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            ++ TS    +VE ML + L P   T+  V+   C    ++  +N
Sbjct: 563 -KEATS----LVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLN 602



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 221/435 (50%), Gaps = 6/435 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+    N+ +  +   G +D A++    M     +PD+ TY  L+ GLC   R+ +A+ +
Sbjct: 194 PDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEM 253

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           +  M  +GC P  +++  +++ LCK   +     L++ M   G  P++VTYN LIHGL  
Sbjct: 254 ISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAK 313

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+ D+A+S L      +   +EV Y   ++     GR  +   ++  M  +    +   
Sbjct: 314 HGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVT 373

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS ++ G  + G+ + A K+ K M + GCKPNTV ++AL++GLC+VGK  EA E+L +  
Sbjct: 374 YSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSE 433

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                 +A TYS +M GF   GK  ++ ++   M +       V  ++LIH LC + K  
Sbjct: 434 EEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPA 493

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A+    Q  S+GC  +VV ++++IHG    G +E AL L ++M        PDV TY +
Sbjct: 494 DAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYL--TNRHPDVVTYTV 551

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +++AL ++  +  +  L+  M++RG  P  VT    +    EK        D LN L   
Sbjct: 552 VVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAV----EDLLNLLDKM 607

Query: 610 LFKRQRTSGGFKIVE 624
           L K   +S   +++E
Sbjct: 608 LAKEGFSSAYNQVIE 622



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 24/269 (8%)

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           V+  ++  L R    D A  ++  MI  G       ++ LM  +  +GK   A+ + + M
Sbjct: 128 VFDEMLVLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLM 187

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            K+ C  +    ++ ++ L   G++ +A     +M   G  PDVV Y+ +I GLC A  +
Sbjct: 188 QKDGCAPDICICNMAVNVLVVAGRIDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRI 247

Query: 524 EEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            +AL++ + ML   CL     PD  +Y  +++ LCK+  ++   +LL  M D G  PD V
Sbjct: 248 VDALEMISSMLQNGCL-----PDKISYFTVMSFLCKEKRVADVQNLLERMSDAGIFPDQV 302

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFK---------------RQRTSGGFKIVEV 625
           T N+ +  L +   A  +   FL E   + F+                 R +   +I+  
Sbjct: 303 TYNMLIHGLAKHGHA-DEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGE 361

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           M+ K   P   T+  VV   CR   +  A
Sbjct: 362 MISKGCRPDVVTYSAVVDGFCRIGELDQA 390



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 102/207 (49%), Gaps = 2/207 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N + F  VI    R G +++A+ L  +M + N  PD+ TY  ++D L ++ ++ EA  L+
Sbjct: 510 NVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLV 569

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           ++M   G  PTPVT+  +I+  C+ G +     L+D M  K    +   YN +I  LC  
Sbjct: 570 EKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSS--AYNQVIEKLCAF 627

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G L +A +LL +++ +    +  T   +++  +  G  +    V   M +R    +  + 
Sbjct: 628 GKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPDLKLC 687

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKG 397
             + S L   G+ + A KL  + +E+G
Sbjct: 688 QKVDSQLALAGEKQAAGKLIIKFVERG 714


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 210/396 (53%), Gaps = 5/396 (1%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT ++N+++K +C  G + +A QLF EM      PD+ TY  ++ G C  + L+ A+ LL
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM   G    PV +  +I  LC  G++  A ++V++M + G + +   + T++ G C K
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G+L  A +  D M       + VTY  +INGL + G   +  RVL  ME++   V+   Y
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI G  K GK  +A  +  +M++K   PN V Y+AL DGLC+ G    A E+L EM +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N FTY+SL+ G  ++G   +A+    DM +     +   Y+ +I  LC+  +L  
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +ML +G KP +V Y+ +++G C +G VE   +L   M  LE    P+  TYN L
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWM--LEKNIHPNTTTYNSL 606

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +   C + N+  + ++   M+ +   P+  T NI +
Sbjct: 607 MKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 215/412 (52%), Gaps = 32/412 (7%)

Query: 243 LDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           LDEAV L  E+ + + C     ++N+L+  LC  G +  A +L D M      P+ VTY 
Sbjct: 238 LDEAVQLFQELPEKNTC-----SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYG 289

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            ++HG C    L+ A+ LL  M A     N V Y ++I  L   G+  D  RV+  M   
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
              ++  +++T++SG  ++G    A   + +M ++G   + V Y+ALI+GLCR G+  EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           E +L EM + G   +A TY+ L+ G+ + GK  +A  +   M +     N V Y+ L  G
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC+ G +  A  +  +M S+G + ++  Y+S+I+GLC AG++E+A++   +M   E   +
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD--EAGLK 527

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PDV+TY  ++ ALC+   +  +  LL  M+D+G  P +VT N+ +               
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG------------- 574

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                        R  GG +++E ML+K + P T+T+  ++++ C  K +++
Sbjct: 575 --------FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 230/484 (47%), Gaps = 9/484 (1%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           L++    +G  K    +   M     VV   ++  +   Y     +E AI+L   M    
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMASPPDVV---TYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
                V ++ SV+ ++  EG    A+     +V   H  +L +   F  V+   CR G +
Sbjct: 316 LELNPV-AYTSVIALLCDEGQVSDAVRVVEDMV--MHGVVL-DAAVFTTVMSGFCRKGDL 371

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
             A   F EM  R    D  TY  L++GLC+   L EA  +L EM+  G     VT+ VL
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+G CK G++  A  + + M  K   PN VTY  L  GLC +G++  A  LL  M +   
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             N  TY ++INGL K G      R ++ M+E     + Y Y+T+I  L +  + + A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L ++M++KG KP  V Y+ L++G C  G+ +  + +L  M+      N  TY+SLMK + 
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
                    EI+K M     V NE  Y++LI G C+   ++EA    ++M+ +G +    
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +Y+++I  L       EA +LF +M      ++PDV  YN  ++    + N+  ++ L +
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDV--YNFYIDLSFNEDNLESTLALCD 729

Query: 569 SMMD 572
            +++
Sbjct: 730 ELVE 733



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 30/271 (11%)

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A++L++++ EK    NT  Y+ L+  LC  G+  +A ++  EM       +  TY  +
Sbjct: 239 DEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYGIM 291

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G+    +   A+++  +MA      N V Y+ +I  LC++G++ +A  V   M+  G 
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             D   +++++ G C  G +  A   F+EM   +     D  TY  L+N LC+   +  +
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ--KRGLAADGVTYTALINGLCRAGELKEA 409

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
             +L  M D+G D D VT  + +           DG            K  + +  F + 
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLI-----------DG----------YCKVGKMTEAFLVH 448

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M+QK ++P   T+  +   LC+   + AA
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 159/552 (28%), Positives = 275/552 (49%), Gaps = 10/552 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           + F    K  +++   +T+ +LI     +G    +   +  M R   V+       I K 
Sbjct: 109 QFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKV 168

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
            GKA +V +A+ +F+  +    CK T  ++NS++ +++QEG + +  E YN + N    +
Sbjct: 169 LGKAKMVNKALSIFYQ-IKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG--D 225

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
            LP+T+T++ +I    +LG  D+AI LF EM      P    Y T++    K  R+++A+
Sbjct: 226 CLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKAL 285

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+ EM+  GC  T  T+  LI G+ K G++  A  +  NM  +GC P+ V  N LI+ L
Sbjct: 286 GLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLL 345

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHVN 366
              G L  A+ L + M + +C PN VTY T+I  L +   RA +       M+E     +
Sbjct: 346 GKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPS 405

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + YS LI G  K  + E A+ L ++M EKG  P    Y +LI+ L +  + + A E+  
Sbjct: 406 SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQ 465

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E+  N   ++A  Y+ ++K   + G+  +AV+++ +M K  C  +   Y+ L+ G+   G
Sbjct: 466 ELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVG 525

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
              EA  +   M   GC PD+ +++ +++G    G  + A+++F  M     K +PDV +
Sbjct: 526 MTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRM--KNSKIKPDVVS 583

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL----KEKLEAPQDGTDF 602
           YN +L  L +      +  L+  M  +G + DL+T +  L A+    ++   A Q     
Sbjct: 584 YNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDEDHTPAGQTVMHI 643

Query: 603 LNELAIRLFKRQ 614
           +N   I L +R+
Sbjct: 644 VNIKIINLVRRE 655


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  236 bits (603), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 135/421 (32%), Positives = 225/421 (53%), Gaps = 8/421 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ + +N ++   C  G VD A +   E   R  E D YT  TL+ GLC   R   A+ +
Sbjct: 126 PDVMAYNAMMAGYCGAGQVDAARRWCAE---RAVERDAYTCDTLIRGLCGRGRTANALAV 182

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LDEM    C P  VT+ +L+   CK     +A KL+D M  KGC P+ VTYN +++G+C 
Sbjct: 183 LDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQ 242

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G +D A+  L  + +  C PN V+Y  ++ GL    R  D   ++  M ++    N   
Sbjct: 243 EGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVT 302

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ LIS L ++G  E A+++ +Q+ + GC PN++ Y+ L+   C+  K D+A   L  M+
Sbjct: 303 FNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV 362

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + GC  +  +Y++L+     SG+   AVE+   +    C    + Y+ +I GL + GK +
Sbjct: 363 SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTK 422

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  +  +M+S+G +PD++ YS++  GLC    +E+A++ F ++   +   +P+   YN 
Sbjct: 423 EALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV--QDMGIRPNTVLYNA 480

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK-EKLEAPQDGTDFLNELAI 608
           ++  LCK+     +IDL   M+  GC P+  T  I +  L  E L   ++  D L+EL  
Sbjct: 481 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGL--IKEARDLLDELCS 538

Query: 609 R 609
           R
Sbjct: 539 R 539



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 203/384 (52%), Gaps = 2/384 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +  T + +I+ +C  G   NA+ +  EM  R C PD+ TY  L++  CK +   +A+ LL
Sbjct: 159 DAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLL 218

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM+  GC P  VT+NV++NG+C+ G +  A + + N+   GC PN V+YN ++ GLC  
Sbjct: 219 DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTA 278

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
              + A  L+  M    C PN VT+  +I+ L + G       VL  + +     N   Y
Sbjct: 279 ERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSY 338

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + L+    K+ K + AM     M+ +GC P+ V Y+ L+  LCR G+ D A E+L ++ +
Sbjct: 339 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 398

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GCA    +Y++++ G  ++GK  +A+E+  +M       + + YS +  GLC + ++ +
Sbjct: 399 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED 458

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A   + ++   G +P+ V Y+++I GLC       A+ LF  M  +     P+  TY IL
Sbjct: 459 AIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM--IGNGCMPNESTYTIL 516

Query: 551 LNALCKQSNISHSIDLLNSMMDRG 574
           +  L  +  I  + DLL+ +  RG
Sbjct: 517 IEGLAYEGLIKEARDLLDELCSRG 540



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 205/432 (47%), Gaps = 26/432 (6%)

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
           C PD+  Y  +M G C   ++D A     E  V+       T + LI GLC  G    A 
Sbjct: 124 CGPDVMAYNAMMAGYCGAGQVDAARRWCAERAVE---RDAYTCDTLIRGLCGRGRTANAL 180

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
            ++D M  + C+P+ VTY  L+   C +    +A+ LLD M    C P+ VTY  ++NG+
Sbjct: 181 AVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 240

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            + GR  D    L ++       N   Y+ ++ GL    + EDA +L  +M +KGC PN 
Sbjct: 241 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 300

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V ++ LI  LCR G  + A E+L ++   GC+ N+ +Y+ L+  F +  K  KA+     
Sbjct: 301 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDL 360

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M    C  + V Y+ L+  LC  G++  A  +  Q+  +GC P +++Y+++I GL  AG 
Sbjct: 361 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 420

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
            +EAL+L NEM+      QPD+ TY+ +   LC++  I  +I     + D G  P+ V  
Sbjct: 421 TKEALELLNEMV--SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV-- 476

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                                N + + L KR+ T     +   M+     P  ST+  ++
Sbjct: 477 -------------------LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 517

Query: 643 QELCRPKRIQAA 654
           + L     I+ A
Sbjct: 518 EGLAYEGLIKEA 529



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 209/379 (55%), Gaps = 4/379 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T  +LI+     G   +   VL  M R + V    ++  + +A  K    ++A++L   M
Sbjct: 162 TCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 221

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D+  C   + ++N V+N I QEG    A+EF   + N       PNT+++N+V+K +C 
Sbjct: 222 RDK-GCTPDIVTYNVVVNGICQEGRVDDAIEF---LKNLPSYGCEPNTVSYNIVLKGLCT 277

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               ++A +L  EM  + C P++ T+  L+  LC++  ++ A+ +L+++   GC P  ++
Sbjct: 278 AERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLS 337

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++  CK  ++ +A   +D M  +GC P+ V+YNTL+  LC  G +D AV LL ++ 
Sbjct: 338 YNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLK 397

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C P  ++Y T+I+GL K G+  +   +L  M  +    +   YST+ +GL +E + E
Sbjct: 398 DKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIE 457

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA++ + ++ + G +PNTV+Y+A+I GLC+  +   A ++   MI NGC  N  TY+ L+
Sbjct: 458 DAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILI 517

Query: 445 KGFFESGKGHKAVEIWKDM 463
           +G    G   +A ++  ++
Sbjct: 518 EGLAYEGLIKEARDLLDEL 536



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/387 (28%), Positives = 205/387 (52%), Gaps = 3/387 (0%)

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
           E   +R   + ++++  +   G    AL   + ++  +    +P+ +T+ ++++  C+  
Sbjct: 153 ERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRR---CVPDVVTYTILLEATCKRS 209

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
               A++L  EM  + C PDI TY  +++G+C+E R+D+A+  L  +   GC P  V++N
Sbjct: 210 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 269

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +++ GLC       A +L+  M  KGC PN VT+N LI  LC KG ++ A+ +L+++   
Sbjct: 270 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 329

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
            C PN ++Y  +++   K  +       L  M  R  + +   Y+TL++ L + G+ + A
Sbjct: 330 GCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 389

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           ++L  Q+ +KGC P  + Y+ +IDGL + GK  EA E+L EM++ G   +  TYS++  G
Sbjct: 390 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 449

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
                +   A+  +  +       N V Y+ +I GLC+  +   A  ++  M+  GC P+
Sbjct: 450 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 509

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEM 533
              Y+ +I GL   G ++EA  L +E+
Sbjct: 510 ESTYTILIEGLAYEGLIKEARDLLDEL 536



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/420 (28%), Positives = 201/420 (47%), Gaps = 37/420 (8%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L +   LDEA+ L+   +     P   T   LI  L  +G    A ++     L  C P+
Sbjct: 77  LVRRGELDEALRLVGSAR----RPDAGTCAALIKKLSASGRTAEARRV-----LAACGPD 127

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV-TYGTIINGLVKLGRAVDGARVL 355
            + YN ++ G C  G +D A     R  A + +  +  T  T+I GL   GR  +   VL
Sbjct: 128 VMAYNAMMAGYCGAGQVDAA----RRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVL 183

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M  R+   +   Y+ L+    K    + AMKL  +M +KGC P+ V Y+ +++G+C+ 
Sbjct: 184 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 243

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G+ D+A E L  + + GC  N  +Y+ ++KG   + +   A E+  +M +  C  N V +
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           ++LI  LC  G +  A  V  Q+   GC P+ ++Y+ ++H  C    +++A+   + M+ 
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMV- 362

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
                 PD+ +YN LL ALC+   +  +++LL+ + D+GC P L++ N  +         
Sbjct: 363 -SRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVI--------- 412

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             DG          L K  +T    +++  M+ K L P   T+  +   LCR  RI+ AI
Sbjct: 413 --DG----------LTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 460


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 168/606 (27%), Positives = 287/606 (47%), Gaps = 32/606 (5%)

Query: 76  LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVE 135
           +  + L +     L+  +  S   K    V+  MR+ K      ++  +  A   A+  +
Sbjct: 161 VAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPD 220

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
             + LFH M  E   +  V  F +++ V  +EG    AL   + + +        N+ T 
Sbjct: 221 PMLTLFHQM-QEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKS--------NSFTA 271

Query: 196 NLVIKTVC-----RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +LV+  VC     ++G VD A + F EM  +   PD  TY TL+  LCK  RLDEAV L 
Sbjct: 272 DLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELF 331

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           +E+ ++   P    +N +I G    G+   A  L++    KGC+P+ + YN ++  L  K
Sbjct: 332 EELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRK 391

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +++A+ + D M      PN  TY  +I+ L K G      +V  +M+E     N    
Sbjct: 392 GKVEEALRIHDEM-RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTV 450

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + +I  L K  K ++A  ++  +  K C P++  + +LIDGL R G+ D+A  +  +M++
Sbjct: 451 NIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLD 510

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +    N   Y+SL++ FF+ G+     +I+K+M    C  + +  +  +  + + G++ +
Sbjct: 511 SDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEK 570

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
            R ++ ++ ++G  PDV +YS +IHGL  AG   E  KLF EM   E     DV  YN +
Sbjct: 571 GRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMK--EQGLHLDVLAYNTV 628

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK--EKL--------EAPQDGT 600
           ++  CK   +  +  LL  M  +G  P +VT    +  L   ++L        EA   G 
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGV 688

Query: 601 DF----LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           D      + L     K  R    + I+E ++QK L+P + TW  ++  L + + I  A  
Sbjct: 689 DLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEA-Q 747

Query: 657 KCWSNL 662
            C+ N+
Sbjct: 748 VCFQNM 753



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 144/540 (26%), Positives = 262/540 (48%), Gaps = 42/540 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F     +L R +R+  +    ++  I    G+   VEEA+R+   M
Sbjct: 345 AYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM 404

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      + ++N +++++ + G    AL+  + +   K   + PN +T N++I  +C+
Sbjct: 405 RQD--AAPNLTTYNILIDMLCKAGELEAALKVQDTM---KEAGLFPNIMTVNIMIDRLCK 459

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A  +F  +  + C PD  T+C+L+DGL +  R+D+A  L ++M      P  V 
Sbjct: 460 AQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVV 519

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI    K G      K+   M  +GC P+ +  N+ +  +   G ++K  +L + + 
Sbjct: 520 YTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIK 579

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A   +P+  +Y  +I+GLVK G + +  ++   M+E+  H++   Y+T+I G  K GK +
Sbjct: 580 AQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVD 639

Query: 385 DAMKLWKQMMEKGCKP-----------------------------------NTVVYSALI 409
            A +L ++M  KG +P                                   N V+YS+LI
Sbjct: 640 KAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLI 699

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  IL E++  G   N++T++ L+    ++ +  +A   +++M    C 
Sbjct: 700 DGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCS 759

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N + YS++I+GLC   K  +A + W +M  +G KP+ + Y++MI GL  AG+V EA  L
Sbjct: 760 PNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGL 819

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+          PD   YN ++  L   +    +  +      +GC  +  TC + L AL
Sbjct: 820 FDRFKA--SGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDAL 877



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 194/408 (47%), Gaps = 4/408 (0%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           ++F  +    G+   V++A  L+  M+D       V  + S++    + G      + Y 
Sbjct: 483 RTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVV-VYTSLIQNFFKCGRKEDGHKIYK 541

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +V   H    P+ +  N  +  V + G V+    LF E+  +   PD+ +Y  L+ GL 
Sbjct: 542 EMV---HRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLV 598

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K     E   L  EM+  G     + +N +I+G CK+G++ +A +L++ M  KG  P  V
Sbjct: 599 KAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVV 658

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY +++ GL     LD+A  L +   +     N V Y ++I+G  K+GR  +   +L  +
Sbjct: 659 TYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEEL 718

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            ++    N Y ++ L+  L K  + ++A   ++ M    C PN + YS +I+GLC + K 
Sbjct: 719 MQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKF 778

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           ++A     EM   G   N  TY++++ G  ++G   +A  ++     +  V +  CY+ +
Sbjct: 779 NKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAM 838

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
           I GL    K  +A +V+ +   +GC+ +      ++  L  A  +E+A
Sbjct: 839 IEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 195/414 (47%), Gaps = 12/414 (2%)

Query: 85  TFYSLIQHYANSG---DFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF SLI      G   D  SL   +    +   VV+  S I  F   G+    E+  +++
Sbjct: 484 TFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRK---EDGHKIY 540

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             MV    C   +   NS ++ + + G   +    +  I   K   ++P+  +++++I  
Sbjct: 541 KEMVHR-GCSPDLMLLNSYMDCVFKAGEVEKGRALFEEI---KAQGLVPDVRSYSILIHG 596

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           + + G      +LF EM  +    D+  Y T++DG CK  ++D+A  LL+EM+  G  PT
Sbjct: 597 LVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPT 656

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+  +++GL K   L  A  L +     G   N V Y++LI G    G +D+A  +L+
Sbjct: 657 VVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILE 716

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSMEERKFHVNEYIYSTLISGLFKE 380
            ++     PN  T+  +++ LVK    +D A+V   +M+  K   N   YS +I+GL   
Sbjct: 717 ELMQKGLTPNSYTWNCLLDALVK-AEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMI 775

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            K   A   W++M ++G KPN + Y+ +I GL + G   EA  +      +G   ++  Y
Sbjct: 776 RKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACY 835

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
           +++++G   + K   A  ++++     C  N     VL+  L +   L +A +V
Sbjct: 836 NAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIV 889



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 99/404 (24%), Positives = 185/404 (45%), Gaps = 19/404 (4%)

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           P  +N  +  + +   L    ++++ M + G  L N V+   L+        L +A  ++
Sbjct: 133 PEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVE-LVASFVKSHKLKEAFGVI 191

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + M   K  P    Y T+I  L    R      +   M+E  +  N ++++TL+    +E
Sbjct: 192 EMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFARE 251

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ + A+ L  +M       + V+Y+  ID   +VGK D A +   EM   G   +  TY
Sbjct: 252 GRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTY 311

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++L+    ++ +  +AVE+++++  N  V     Y+ +I G    GK  EA  +  +   
Sbjct: 312 TTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR 371

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           +GC P V+AY+ ++  L   G VEEAL++ +EM      + P++ TYNIL++ LCK   +
Sbjct: 372 KGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM---RQDAAPNLTTYNILIDMLCKAGEL 428

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN--------------EL 606
             ++ + ++M + G  P+++T NI +  L +  +  +  + FL                L
Sbjct: 429 EAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSL 488

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
              L +R R    + + E ML     P    +  ++Q   +  R
Sbjct: 489 IDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGR 532



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 199/488 (40%), Gaps = 50/488 (10%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           VEEA+ +F  M         +K    V NV  Q   Y R +E      +   +       
Sbjct: 87  VEEALNVFDEMSQPEVIVGVMKRLKDV-NVAFQ---YFRWVERKTQQAHCPEV------- 135

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N  +  + R   +D   Q+  EM V       +    L+    K ++L EA  +++ M
Sbjct: 136 -YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM 194

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +     P    +  LI  L           L   M   G   N   + TL+     +G +
Sbjct: 195 RKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRI 254

Query: 314 DKAVSLLD-----------------------------------RMVASKCMPNEVTYGTI 338
           D A+SLLD                                    M A   +P++VTY T+
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTL 314

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I  L K  R  +   +   ++  +     Y Y+T+I G    GK ++A  L ++   KGC
Sbjct: 315 IGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGC 374

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ + Y+ ++  L R GK +EA  I  EM  +  A N  TY+ L+    ++G+   A++
Sbjct: 375 IPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALK 433

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +   M +     N +  +++I  LC+  KL EA  ++  +  + C PD   + S+I GL 
Sbjct: 434 VQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLG 493

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G V++A  L+ +M  L+    P+V  Y  L+    K         +   M+ RGC PD
Sbjct: 494 RRGRVDDAYSLYEKM--LDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPD 551

Query: 579 LVTCNIFL 586
           L+  N ++
Sbjct: 552 LMLLNSYM 559


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 256/524 (48%), Gaps = 7/524 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKR-VVLEKSFIFIFK 126
           + F    K  +Y+   ST+ +LI+       +  +  ++  M R    VV       I +
Sbjct: 104 QFFRWAAKKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIR 163

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             G A ++ +A+ +F+  +    C+ T +++NS++ +++ EG Y +  E YN + N  H 
Sbjct: 164 MLGNAKMISKAVAIFYQ-IKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGH- 221

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
              P+T+T++ +I   C+LG  D+AI+L  EM     +P    Y  L+    K N +  A
Sbjct: 222 -CFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGA 280

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L +EM+   C P   T+  LI GL K G    A      M  +GC P+ V  N +I+ 
Sbjct: 281 LGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINF 340

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHV 365
           L   G LD AV L + M   +C+P+ VTY TII  L +   R  + +     M+      
Sbjct: 341 LGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISP 400

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS LI G  K  + E AM L ++M EKG  P    Y +LID L +  + D A E+ 
Sbjct: 401 SPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELF 460

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+  N  +++A  Y+ ++K   ++G+   AV ++ +M K  C  N   Y+ L+ GL   
Sbjct: 461 QELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARA 520

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L EA     +M   GC PD+ +Y+ +++GL   G    A+++ + M   +   +PD  
Sbjct: 521 GMLDEALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK--QSAIKPDAV 578

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +YN +L A+        +  L+  M   G + DL+T +  L A+
Sbjct: 579 SYNTVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAI 622



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 138/538 (25%), Positives = 240/538 (44%), Gaps = 56/538 (10%)

Query: 108 RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE 167
           R  R  RV+ E+ FI I K +      E+A+ +    VD +  +  +K+ +  +NV +Q 
Sbjct: 48  RYTRSVRVMDER-FIRILKIFKWGPDAEKALEVLMLKVDHWLVREVMKT-DVGVNVKMQ- 104

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN--CEP 225
                   F+     AK  N   +T T+  +I+ +  +       ++ +EM VRN  C  
Sbjct: 105 --------FFRWA--AKKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEM-VRNPVCVV 153

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
                  ++  L     + +AV +  +++V  C PT   +N +I  L   G+  +  +L 
Sbjct: 154 TPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELY 213

Query: 286 DNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           + M  +G C P+ VTY+ LI   C  G  D A+ LL+ M  +   P    Y  +I    K
Sbjct: 214 NEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFK 273

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           L        +   M  +    + + Y+ LI GL K G+ ++A   + +M  +GC+P+TVV
Sbjct: 274 LNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVV 333

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
            + +I+ L + G+ D+A ++  EM    C  +  TY++++K  FES      +  W +  
Sbjct: 334 INNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERM 393

Query: 465 KNNCVY-NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS----------- 512
           K + +  +   YS+LI G C+  +  +A M+  +M  +G  P   AY S           
Sbjct: 394 KGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY 453

Query: 513 ------------------------MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
                                   MI  L  AG +++A+ LF+EM  L     P+V+ YN
Sbjct: 454 DIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKL--GCTPNVYAYN 511

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            L++ L +   +  ++  +  M + GC PD+ + NI L  L  K   P    + L+ +
Sbjct: 512 ALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLA-KTGGPHRAMEMLSNM 568



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 161/335 (48%), Gaps = 11/335 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE----KRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           T+  LI+    +G F       + MRRE      VV+     F+    GKA  +++A++L
Sbjct: 298 TYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFL----GKAGRLDDAVKL 353

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M     C  +V ++N+++  + +     R  E  +     K   I P+  T++++I 
Sbjct: 354 FEEM-GTLQCIPSVVTYNTIIKALFESK--SRISEISSWFERMKGSGISPSPFTYSILID 410

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C+    + A+ L  EM  +   P    YC+L+D L K  R D A  L  E++ +    
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSS 470

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +   + V+I  L K G L  A  L D M   GC PN   YN L+ GL   G LD+A++ +
Sbjct: 471 SARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTM 530

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            RM    C+P+  +Y  I+NGL K G       +L +M++     +   Y+T++  +   
Sbjct: 531 RRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHA 590

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
           G  E+A KL K+M   G + + + YS++++ + +V
Sbjct: 591 GLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGKV 625


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/396 (32%), Positives = 210/396 (53%), Gaps = 5/396 (1%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT ++N+++K +C  G + +A QLF EM      PD+ TY  ++ G C  + L+ A+ LL
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM   G    PV +  +I  LC  G++  A ++V++M + G + +   + T++ G C K
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G+L  A +  D M       + VTY  +INGL + G   +  RVL  ME++   V+   Y
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI G  K GK  +A  +  +M++K   PN V Y+AL DGLC+ G    A E+L EM +
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N FTY+SL+ G  ++G   +A+    DM +     +   Y+ +I  LC+  +L  
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +ML +G KP +V Y+ +++G C +G VE   +L   M  LE    P+  TYN L
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWM--LEKNIHPNTTTYNSL 606

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +   C + N+  + ++   M+ +   P+  T NI +
Sbjct: 607 MKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILI 642



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/412 (30%), Positives = 215/412 (52%), Gaps = 32/412 (7%)

Query: 243 LDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           LDEAV L  E+ + + C     ++N+L+  LC  G +  A +L D M      P+ VTY 
Sbjct: 238 LDEAVQLFQELPEKNTC-----SYNILLKALCTAGRIKDAHQLFDEM---ASPPDVVTYG 289

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            ++HG C    L+ A+ LL  M A     N V Y ++I  L   G+  D  RV+  M   
Sbjct: 290 IMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMH 349

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
              ++  +++T++SG  ++G    A   + +M ++G   + V Y+ALI+GLCR G+  EA
Sbjct: 350 GVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEA 409

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           E +L EM + G   +A TY+ L+ G+ + GK  +A  +   M +     N V Y+ L  G
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDG 469

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC+ G +  A  +  +M S+G + ++  Y+S+I+GLC AG++E+A++   +M   E   +
Sbjct: 470 LCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMD--EAGLK 527

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PDV+TY  ++ ALC+   +  +  LL  M+D+G  P +VT N+ +               
Sbjct: 528 PDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNG------------- 574

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                        R  GG +++E ML+K + P T+T+  ++++ C  K +++
Sbjct: 575 --------FCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKS 618



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 230/484 (47%), Gaps = 9/484 (1%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           L++    +G  K    +   M     VV   ++  +   Y     +E AI+L   M    
Sbjct: 259 LLKALCTAGRIKDAHQLFDEMASPPDVV---TYGIMVHGYCTLSELETAIKLLSEMAARG 315

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
                V ++ SV+ ++  EG    A+     +V   H  +L +   F  V+   CR G +
Sbjct: 316 LELNPV-AYTSVIALLCDEGQVSDAVRVVEDMV--MHGVVL-DAAVFTTVMSGFCRKGDL 371

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
             A   F EM  R    D  TY  L++GLC+   L EA  +L EM+  G     VT+ VL
Sbjct: 372 AAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVL 431

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+G CK G++  A  + + M  K   PN VTY  L  GLC +G++  A  LL  M +   
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             N  TY ++INGL K G      R ++ M+E     + Y Y+T+I  L +  + + A  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L ++M++KG KP  V Y+ L++G C  G+ +  + +L  M+      N  TY+SLMK + 
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
                    EI+K M     V NE  Y++LI G C+   ++EA    ++M+ +G +    
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +Y+++I  L       EA +LF +M      ++PDV  YN  ++    + N+  ++ L +
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDV--YNFYIDLSFNEDNLESTLALCD 729

Query: 569 SMMD 572
            +++
Sbjct: 730 ELVE 733



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 125/271 (46%), Gaps = 30/271 (11%)

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A++L++++ EK    NT  Y+ L+  LC  G+  +A ++  EM +     +  TY  +
Sbjct: 239 DEAVQLFQELPEK----NTCSYNILLKALCTAGRIKDAHQLFDEMAS---PPDVVTYGIM 291

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G+    +   A+++  +MA      N V Y+ +I  LC++G++ +A  V   M+  G 
Sbjct: 292 VHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGV 351

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             D   +++++ G C  G +  A   F+EM   +     D  TY  L+N LC+   +  +
Sbjct: 352 VLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ--KRGLAADGVTYTALINGLCRAGELKEA 409

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
             +L  M D+G D D VT  + +           DG            K  + +  F + 
Sbjct: 410 ERVLQEMEDKGLDVDAVTYTVLI-----------DG----------YCKVGKMTEAFLVH 448

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M+QK ++P   T+  +   LC+   + AA
Sbjct: 449 NKMVQKRVTPNVVTYTALSDGLCKQGDVCAA 479


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 234/468 (50%), Gaps = 4/468 (0%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           KS +  F            ++ + +MV      R  +   S+L+ ++       A   + 
Sbjct: 91  KSLLSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFA 150

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            I+  K    L ++  F+ ++      G V +AIQ FR     N +        L++ + 
Sbjct: 151 SILETK--GTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIPFNGCKCLLERMI 208

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K +    A+    E+   G  P   TFNVL+N LCK G++  A  + D +   G  P  V
Sbjct: 209 KMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAV 268

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           ++NTLI+G C  GNL++   L   M   +  P+  TY  +I+GL K  +  D   +   M
Sbjct: 269 SFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEM 328

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +R    N+  ++TLI+G  K G+ + A+++++QM  KG K + V+Y+ LIDGLC+ G  
Sbjct: 329 CDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYF 388

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EA + + EM   G   + FTY++L+ G  + G    A+E+ K+M K     + V ++ +
Sbjct: 389 REARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAI 448

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I GLC DGK+ +A     +ML  G KPD   Y+ ++ G C  G V+   KL  EM     
Sbjct: 449 ISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQ--SD 506

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
              P V TYN+L+N LCKQ  + ++  LLN+M++ G  PD +T NI L
Sbjct: 507 GHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILL 554



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 169/569 (29%), Positives = 283/569 (49%), Gaps = 37/569 (6%)

Query: 9   TKILLTITNSAMKMKT----LSLTTI-PSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQ 63
           + IL TI+ +   ++T    +SL  I PS ++H F S+   V+ N           KS  
Sbjct: 43  SPILTTISEAIKNIETKPLHISLKNILPSFKAHHFISL---VNQNPYFLP-----PKSLL 94

Query: 64  PFSDEIFNSTPKLG-SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR----------- 111
            F D   +S P    + Q   S  + LI H  N      L  V+ R  +           
Sbjct: 95  SFFD-FLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASIL 153

Query: 112 EKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL 169
           E +  L  SF+F  +   Y +   V +AI+ F  +  + + K        +L  +I+   
Sbjct: 154 ETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFR-LTKKHNLKIPFNGCKCLLERMIKMSS 212

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
              ALEFY  I+++ +    PN  TFN+++  +C+ G V +A  +F E+     +P   +
Sbjct: 213 PMVALEFYLEILDSGYP---PNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVS 269

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           + TL++G CK   L+E   L   M+    FP   T++ LI+GLCK  +L  A  L   M 
Sbjct: 270 FNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMC 329

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            +G +PN+VT+ TLI+G C  G +D A+ +  +M       + V Y T+I+GL K G   
Sbjct: 330 DRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFR 389

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +  + +  M +R    +++ Y+TL+ G  KEG  E A+++ K+M+++G + + V ++A+I
Sbjct: 390 EARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAII 449

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLCR GK  +AE  L EM+  G   +  TY+ +M GF + G      ++ K+M  +  +
Sbjct: 450 SGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDGHI 509

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
              + Y+VL++GLC+ G+++ A M+   ML+ G  PD + Y+ ++ G C  G + +   +
Sbjct: 510 PGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQNV 569

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQS 558
             EM  +      D  +Y  LL+ L K S
Sbjct: 570 KTEMGLVS-----DYASYRSLLHELSKAS 593


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 246/499 (49%), Gaps = 36/499 (7%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           +R+V+ FN +++   + G   RA+E    +   K     P+ +T+N ++   C++G +  
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGM---KTEGPAPDIVTYNTLMNGFCKIGDLFT 70

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A +L  E+ + N EP++ TY TL+D  CK   L++A+ + DEM V    P  VT+  ++N
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLCK+G++  A  +   M   G +PN  +Y TLI  L  +GN+ +A  L  RMV      
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + V Y  +++GL K G A +   +   + E     N   YS LI G  K G       L 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           ++M EK   PN +VYS+++DG  + G  +EA +++ +M+      N F Y +L+ G+F++
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            +   A++++K+M       N       ++ L   G++ EA  ++  M+SRG  PD V Y
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 511 SSMIHGLCNAGSVEEALKLFNEML----------------------CLEPKS-------- 540
           +SM+ G   AG   +A  +  EM                         E +S        
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430

Query: 541 --QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PD  T+N ++NA CK+ N+ +++ LLN M   G  P+ +TCNI +  L    E  + 
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEI-EK 489

Query: 599 GTDFLNELAIRLFKRQRTS 617
             D LN++ +  F    T+
Sbjct: 490 TMDLLNDMLVMGFHPTPTT 508



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 261/583 (44%), Gaps = 25/583 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ +LI  +   GD    E++L  M  E++ +     ++  I   Y K  L+ EA+ +  
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEM--EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMR 286

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV   +    V  + ++++   +      AL+ +  +   K   +  N    +  +  +
Sbjct: 287 KMVQR-NILPNVFVYGTLIDGYFKADQRGIALDLFKEM---KSRGLEENNFVIDSFVNNL 342

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            R G ++ A +LF++M  R   PD   Y ++MDG  K  +  +A  +  EM         
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V +NVLINGL K G+   +      M   G  P+  T+NT+I+  C +GNL  A+ LL+ 
Sbjct: 403 VAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M +    PN +T   ++  L   G       +L  M    FH     +  ++    K  +
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           A+  + +  Q++  G K +   Y+ LI   CR+G    A  +  +M+  G  A+  TY++
Sbjct: 522 ADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G+  S    KA  +   M       N   Y++L+ GL     ++EA  +  QM  RG
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKSQPDVFTYNILLNALCKQSNI 560
             P+   Y  ++ G    G+++E +KL+ EM+     PK++    TYN+L++   K   +
Sbjct: 642 LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTR----TYNVLISCFAKGKKM 697

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
           S + +L+  M  RG  P+  T +I +    +  + P+     LN    +  KR   +   
Sbjct: 698 SQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE-----LN----KSLKRSYQAEAK 748

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLY 663
           ++ E M +K   P  +T   +   L +P + +A   +  + LY
Sbjct: 749 RLFEEMNEKGFIPCENTLACISFTLAKPGK-KADAQRILNKLY 790


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 171/574 (29%), Positives = 263/574 (45%), Gaps = 79/574 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRM--RREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           T+  L+  Y   GDF+ +E VL  M  R   R V+  +   + + Y K   ++EA +L  
Sbjct: 263 TYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVV--TCTMLMRGYCKKGKMDEAEKLLR 320

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            + ++       + +  +++   Q G    A+   + ++    + +  N +  N +IK  
Sbjct: 321 EVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEML---RVGLKVNMVICNTLIKGY 377

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+LG V  A ++F  M   N +PD Y+Y TL+DG C+E ++ +A +L +EM  DG  PT 
Sbjct: 378 CKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTV 437

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT----------------------- 299
           VT+N +I GL   G    A  L   M  +G  PNE++                       
Sbjct: 438 VTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKE 497

Query: 300 ------------YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                       +NT+I GLC  G L +A ++ DRM      P+E+TY T+ +G  K G 
Sbjct: 498 ILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGN 557

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +  ++   ME +    +  +Y++LI GLFK  K  D   L  +M  +G  PN V Y  
Sbjct: 558 VQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGT 617

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM---- 463
           LI G C   K D+A  + FEMI  G   N    S ++   +   +  +A  I   M    
Sbjct: 618 LISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFD 677

Query: 464 ------------AKN-------------------NCVYNEVCYSVLIHGLCEDGKLREAR 492
                        KN                   N + N + Y++ I GLC+ GKL EAR
Sbjct: 678 ILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEAR 737

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            V + ++SRG  PD   Y ++IH    +G+V+EA KL +EM  LE    P++  YN L+N
Sbjct: 738 SVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEM--LEKGLIPNITIYNALIN 795

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            LCK  NI  +  L   +  +G  P+ VT NI +
Sbjct: 796 GLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILI 829



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 141/493 (28%), Positives = 246/493 (49%), Gaps = 16/493 (3%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            +  A+ +   V+ A+ +   MV E   +  V ++N ++N  +  G +   +E    +++
Sbjct: 231 IVVNAHCQVGRVDVAMEVLEKMVKE-GLEPNVVTYNGLVNGYVGRGDFE-GVERVLRLMS 288

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKEN 241
            +   +  N +T  ++++  C+ G +D A +L RE+        D   Y  L+DG C+  
Sbjct: 289 ER--GVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMG 346

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           R+++AV + DEM   G     V  N LI G CK G++  A ++   M      P+  +YN
Sbjct: 347 RMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYN 406

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           TL+ G C +G + KA  L + M+     P  VTY T+I GLV +G   D   +   M ER
Sbjct: 407 TLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVER 466

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               NE    T++   FK G ++ AM LWK+++ +G   +TV ++ +I GLC++GK  EA
Sbjct: 467 GVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEA 526

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +   M   G + +  TY +L  G+ ++G   +A +I   M +     +   Y+ LI G
Sbjct: 527 GAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDG 586

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           L +  KL +   +  +M +RG  P+VV Y ++I G C+   +++A  L+ EM  +E    
Sbjct: 587 LFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEM--IERGFT 644

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMD-------RGCDPDLVTCNIFLTALKEKLE 594
           P+V   + ++++L +   IS +  +L+ M+D         C   LV  ++ L A  +K+ 
Sbjct: 645 PNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEA--QKIA 702

Query: 595 APQDGTDFLNELA 607
              D +D  N L+
Sbjct: 703 DSLDKSDICNSLS 715



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 235/501 (46%), Gaps = 27/501 (5%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F+ ++    + G+   AL  ++ +     +  +P   + + ++  + + G    A+ +F 
Sbjct: 159 FDMLMKAFAERGMTKHALYVFDEM---SRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFD 215

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           ++      PD+Y    +++  C+  R+D A+ +L++M  +G  P  VT+N L+NG    G
Sbjct: 216 QIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRG 275

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP-NEVTY 335
           +     +++  M  +G   N VT   L+ G C KG +D+A  LL  +   + +  +E  Y
Sbjct: 276 DFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVY 335

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
           G +++G  ++GR  D  R+   M      VN  I +TLI G  K G+  +A +++  M++
Sbjct: 336 GVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD 395

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
              KP+   Y+ L+DG CR GK  +A  +  EM+ +G      TY++++KG  + G    
Sbjct: 396 WNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDD 455

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ +W  M +     NE+    ++    + G    A M+W ++L RG     VA+++MI 
Sbjct: 456 ALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMIS 515

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  G + EA  +F+ M   E    PD  TY  L +  CK  N+  +  +   +M+R  
Sbjct: 516 GLCKMGKLMEAGAVFDRMK--ELGLSPDEITYRTLSDGYCKNGNVQEAFQI-KGVMER-- 570

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
                             +A     +  N L   LFK ++ +    ++  M  + LSP  
Sbjct: 571 ------------------QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNV 612

Query: 636 STWERVVQELCRPKRIQAAIN 656
            T+  ++   C  +++  A +
Sbjct: 613 VTYGTLISGWCDEQKLDKAFH 633



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 137/500 (27%), Positives = 226/500 (45%), Gaps = 78/500 (15%)

Query: 108 RMRREK-RVVLEKSFIF---IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
           R+R E  RV L+ + +    + K Y K   V EA R+F  MVD ++ K    S+N++L+ 
Sbjct: 353 RIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVD-WNLKPDCYSYNTLLDG 411

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
             +EG   +A      ++      I P  +T+N VIK +  +G  D+A+ L+  M  R  
Sbjct: 412 YCREGKVSKAFMLCEEMLGD---GITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGV 468

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
            P+  + CT++D   K    D A++L  E+   G   + V FN +I+GLCK G+L  A  
Sbjct: 469 TPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGA 528

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA--------------------------- 316
           + D M   G  P+E+TY TL  G C  GN+ +A                           
Sbjct: 529 VFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLF 588

Query: 317 --------VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
                     LL  M      PN VTYGT+I+G     +      +   M ER F  N  
Sbjct: 589 KIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVV 648

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMME-------KGCK---------------------- 399
           + S ++S L+++ +  +A  +  +M++         C                       
Sbjct: 649 VCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKS 708

Query: 400 ------PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
                  N +VY+  IDGLC+ GK DEA  +L  +++ G   + FTY +L+     SG  
Sbjct: 709 DICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNV 768

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A ++  +M +   + N   Y+ LI+GLC+ G +  A+ ++ ++  +G  P+ V Y+ +
Sbjct: 769 DEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNIL 828

Query: 514 IHGLCNAGSVEEALKLFNEM 533
           I   C  G +++A +L  +M
Sbjct: 829 IGCYCRIGDLDKASRLREKM 848



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 135/588 (22%), Positives = 232/588 (39%), Gaps = 113/588 (19%)

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT- 232
           L F++      H    P++L++++++  +    L   A  + R++   +C  +   Y   
Sbjct: 85  LSFFHLATQNSHYR--PHSLSYSILLHILTHARLFPEATTVLRQLMDLHCTNNYRAYAVC 142

Query: 233 -------------------LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
                              LM    +      A+ + DEM   G  P   + + L+  L 
Sbjct: 143 NHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLV 202

Query: 274 KNGELGRAAKLV-DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           + GE GR A +V D +   G +P+    + +++  C  G +D A+ +L++MV     PN 
Sbjct: 203 QKGE-GRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNV 261

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFH---------------------------- 364
           VTY  ++NG V  G      RVL  M ER                               
Sbjct: 262 VTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLRE 321

Query: 365 --------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
                   V+E +Y  L+ G  + G+ EDA+++  +M+  G K N V+ + LI G C++G
Sbjct: 322 VEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLG 381

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           +  EAE +   M++     + ++Y++L+ G+   GK  KA  + ++M  +      V Y+
Sbjct: 382 QVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYN 441

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPD------------------------------ 506
            +I GL + G   +A  +W  M+ RG  P+                              
Sbjct: 442 TVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGR 501

Query: 507 -----VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
                 VA+++MI GLC  G + EA  +F+ M   E    PD  TY  L +  CK  N+ 
Sbjct: 502 GFTKSTVAFNTMISGLCKMGKLMEAGAVFDRM--KELGLSPDEITYRTLSDGYCKNGNVQ 559

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK--------- 612
            +  +   M  +     +   N  +  L  K+    D TD L E+  R            
Sbjct: 560 EAFQIKGVMERQAMSASIEMYNSLIDGLF-KIRKLNDVTDLLVEMQTRGLSPNVVTYGTL 618

Query: 613 ------RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  Q+    F +   M+++  +P      ++V  L R  RI  A
Sbjct: 619 ISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEA 666



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 187/416 (44%), Gaps = 39/416 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I+   + G +     + + M        E S   +   + K    + A+ L+  +
Sbjct: 439 TYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEI 498

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +     K TV +FN++++ + + G    A   ++ +   K + + P+ +T+  +    C+
Sbjct: 499 LGRGFTKSTV-AFNTMISGLCKMGKLMEAGAVFDRM---KELGLSPDEITYRTLSDGYCK 554

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A Q+   M  +     I  Y +L+DGL K  +L++   LL EMQ  G  P  VT
Sbjct: 555 NGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVT 614

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM- 323
           +  LI+G C   +L +A  L   M  +G  PN V  + ++  L     + +A  +LD+M 
Sbjct: 615 YGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKML 674

Query: 324 ------VASKC----------------------------MPNEVTYGTIINGLVKLGRAV 349
                 V +KC                            + N + Y   I+GL K G+  
Sbjct: 675 DFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLD 734

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +   VL  +  R F  + + Y TLI      G  ++A KL  +M+EKG  PN  +Y+ALI
Sbjct: 735 EARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALI 794

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           +GLC++G  D A+ + +++   G   NA TY+ L+  +   G   KA  + + M +
Sbjct: 795 NGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTE 850



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 169/356 (47%), Gaps = 14/356 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            F ++I      G       V  RM+       E ++  +   Y K   V+EA ++   M
Sbjct: 509 AFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVM 568

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYH-RAL-EFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            +      +++ +NS++     +GL+  R L +  + +V  +   + PN +T+  +I   
Sbjct: 569 -ERQAMSASIEMYNSLI-----DGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGW 622

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C    +D A  L+ EM  R   P++     ++  L +++R+ EA ++LD+M +D  F   
Sbjct: 623 CDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKM-LD--FDIL 679

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMF---LKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
              N   + L KN     A K+ D++    +   L N + YN  I GLC  G LD+A S+
Sbjct: 680 AVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSV 739

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  +++   +P+  TY T+I+     G   +  ++   M E+    N  IY+ LI+GL K
Sbjct: 740 LSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCK 799

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
            G  + A +L+ ++ +KG  PN V Y+ LI   CR+G  D+A  +  +M   G + 
Sbjct: 800 LGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIST 855


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 257/524 (49%), Gaps = 7/524 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSL-EMVLYRMRREKRVVLEKSFIFIFK 126
           + F    K  +Y+   ST+ +LI+       +  + +M+   +R    VV       + +
Sbjct: 108 QFFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVR 167

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             G A +V +AI +F+  +    C+ T +++NS++ +++ EG Y +  E YN +    H 
Sbjct: 168 MLGNAKMVSKAIAIFYQ-IKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGH- 225

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
              P+T+T++ +I   C+LG  D+A QL  EM     +P    Y  L+    K + +  A
Sbjct: 226 -CFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGA 284

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L +EM+   C P   T+  LI GL K G +  A      M  +GC P+ V  N +I+ 
Sbjct: 285 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINF 344

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHV 365
           L   G LD A+ L   M   +C+P+ VTY TII  L +   RA +       M+E     
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS LI G  K  + E AM L ++M EKG  P    Y +LID L +  + D A E+ 
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+  N  +++A  Y+ ++K   ++G+   A+ ++ +M K  C  +   Y+ L+ GL   
Sbjct: 465 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 524

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L EA     +M   GC PD+ +Y+ +++GL   G    A+++ + M   +   +PDV 
Sbjct: 525 GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK--QSTVRPDVV 582

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +YN +L AL        +  L+  M   G + DL+T +  L A+
Sbjct: 583 SYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAI 626



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 137/531 (25%), Positives = 235/531 (44%), Gaps = 57/531 (10%)

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           VL++ FI I K +      E+A+ +    VD +  +  +K+   V NV +Q         
Sbjct: 59  VLDERFIRILKIFKWGPDAEKALEVLMLRVDHWLVREVMKTDIGV-NVKMQ--------- 108

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIK---TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           F+     AK  N   +T T+  +I+    V + G +   IQ     P+    P   +   
Sbjct: 109 FFRWA--AKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVV 166

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
            M G  K   + +A+ +  +++   C PT   +N +I  L   G+ G+  +L + M  +G
Sbjct: 167 RMLGNAK--MVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEG 224

Query: 293 -CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
            C P+ +TY+ LI   C  G  D A  LL+ M  +   P    Y  +I    KL      
Sbjct: 225 HCFPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGA 284

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +   M  +    + + Y+ LI GL K G+ ++A   + +M  +GC+P+TVV + +I+ 
Sbjct: 285 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINF 344

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY- 470
           L + G+ D+A ++  EM    C  +  TY++++K  FES      V  W +  K + +  
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS------------------ 512
           +   YS+LI G C+  ++ +A M+  +M  +G  P   AY S                  
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464

Query: 513 -----------------MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
                            MI  L  AG +++A+ +F+EM  L     PDV+ YN L++ L 
Sbjct: 465 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL--GCAPDVYAYNALMSGLA 522

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           +   +  ++  +  M + GC PD+ + NI L  L  K   P    + L+ +
Sbjct: 523 RTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLA-KTGGPHRAMEMLSNM 572



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/335 (28%), Positives = 163/335 (48%), Gaps = 11/335 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE----KRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           T+  LI+    +G         Y M+RE      VV+     F+    GKA  +++A++L
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFL----GKAGRLDDAMKL 357

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M     C  +V ++N+++  + +     RA E  +     K   I P++ T++++I 
Sbjct: 358 FQEM-GTLRCIPSVVTYNTIIKALFESK--SRASEVPSWFERMKESGISPSSFTYSILID 414

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C+   ++ A+ L  EM  +   P    YC+L+D L K  R D A  L  E++ +    
Sbjct: 415 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 474

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +   + V+I  L K G L  A  + D M   GC P+   YN L+ GL   G LD+A+S +
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 534

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            RM    C+P+  +Y  I+NGL K G       +L +M++     +   Y+T++  L   
Sbjct: 535 RRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHA 594

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
           G  E+A KL ++M   G + + + YS++++ + +V
Sbjct: 595 GMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKV 629



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 23/271 (8%)

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLM 444
           A+ ++ Q+  + C+P    Y+++I  L   G+  +  E+  EM   G C  +  TYS+L+
Sbjct: 178 AIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALI 237

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             F + G+   A ++  +M +N        Y++LI    +   +  A  ++ +M  + C+
Sbjct: 238 SAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCR 297

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PDV  Y+ +I GL  AG ++EA   F EM       +PD    N ++N L K   +  ++
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFFYEMQ--REGCRPDTVVMNNMINFLGKAGRLDDAM 355

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
            L   M    C P +VT N  + AL E      +   +        F+R + SG      
Sbjct: 356 KLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSW--------FERMKESG------ 401

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                 +SP + T+  ++   C+  R++ A+
Sbjct: 402 ------ISPSSFTYSILIDGFCKTNRMEKAM 426


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  236 bits (602), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 262/525 (49%), Gaps = 33/525 (6%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY--HRALEFYNHIVNAKHMNILPNTLT 194
           A +L H+     H + ++++ N+VL+ + +        +L+ +  ++    + + PN  T
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIA---LRLHPNHYT 212

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           FNL++ T C  G + +A+     M      PD+ TY TL+   C++  L EA  LL  M+
Sbjct: 213 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMK 272

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +G  PT  T+N L++   + G + +A  +V+ M   G  P+  TYN L  GLC  G +D
Sbjct: 273 KEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVD 332

Query: 315 KAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           +A  L D M   S   P+ VTY T+++   K  R+ D   +L  M ++    +   ++ +
Sbjct: 333 EAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIV 392

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL +EG+ E+A+   K M E+G  P+ + Y+ LID  C+     +A  ++ EM+ +G 
Sbjct: 393 VKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGL 452

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             + FT ++L+    +  +  +A E+ +   +   V +EV Y  ++    ++ K   A  
Sbjct: 453 KMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALY 512

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +W +M  R   P +  Y+++I GLC  G + EA+   NE+  ++    PD  TYNI+++A
Sbjct: 513 LWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNEL--MKKGLVPDDTTYNIIIHA 570

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIRLF 611
            CK+ ++  +    N M++    PD+VTCN  +    L  KLE            AI+LF
Sbjct: 571 YCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEK-----------AIKLF 619

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +     G  K V+V+          T+  ++Q LC+   +  A++
Sbjct: 620 ESWAEKG--KKVDVI----------TYNTLIQALCKDGDVDTALH 652



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/476 (30%), Positives = 230/476 (48%), Gaps = 44/476 (9%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A+    TM   F     V ++N++L    ++G+   A      +   K   I P   T+
Sbjct: 228 DALSTLSTM-QGFGLSPDVVTYNTLLKAHCRKGMLGEARTL---LARMKKEGIAPTRATY 283

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ- 254
           N ++    RLG +  A  +   M     EPD++TY  L  GLC+  ++DEA  L DEM+ 
Sbjct: 284 NTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEH 343

Query: 255 --------------VDGCF---------------------PTPVTFNVLINGLCKNGELG 279
                         VD CF                      + VT N+++ GLC+ G+L 
Sbjct: 344 LSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLE 403

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A   +  M  +G  P+ +TYNTLI   C   N+ KA  L+D MV S    +  T  T++
Sbjct: 404 EALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLL 463

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
             L K  R  +   +L S  +R F  +E  Y T+++  FKE K E A+ LW +M ++   
Sbjct: 464 YNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLT 523

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+   Y+ LI GLC +GK  EA + L E++  G   +  TY+ ++  + + G   KA + 
Sbjct: 524 PSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQF 583

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
              M +N    + V  + L++GLC  GKL +A  ++     +G K DV+ Y+++I  LC 
Sbjct: 584 HNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCK 643

Query: 520 AGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G V+ AL  F +M   E +  QPD FTYN++L+AL +      + ++L+ + + G
Sbjct: 644 DGDVDTALHFFADM---EARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESG 696



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 196/386 (50%), Gaps = 7/386 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +EEA+     M +E      + ++N++++   +     +A    + +V +    +  +T 
Sbjct: 402 LEEALGRLKMMTEEGLAPDVI-TYNTLIDAYCKARNVAKAFVLMDEMVRS---GLKMDTF 457

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N ++  +C+    + A +L R  P R   PD  +Y T+M    KEN+ + A+ L DEM
Sbjct: 458 TLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEM 517

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P+  T+N LI GLC  G+L  A   ++ +  KG +P++ TYN +IH  C +G+L
Sbjct: 518 SKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDL 577

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           +KA    ++M+ +   P+ VT  T++NGL   G+     ++  S  E+   V+   Y+TL
Sbjct: 578 EKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTL 637

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I  L K+G  + A+  +  M  +G +P+   Y+ ++  L   G+ +EA+ +L ++  +G 
Sbjct: 638 IQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGK 697

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKD--MAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
            +  F+Y  L+K   E  K  K  E+  D     N    ++  Y+  +  LC  G+L+EA
Sbjct: 698 LSERFSY-PLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEA 756

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGL 517
           + V  +M+ +G   D   Y +++ GL
Sbjct: 757 KAVLDEMMQKGMSVDSSTYITLMEGL 782



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 134/518 (25%), Positives = 228/518 (44%), Gaps = 44/518 (8%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+ +L+  YA  G  K    V+  M          ++  +     +A  V+EA +L   
Sbjct: 281 ATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDE 340

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M         V ++N++++   +   Y R+ +  N +   +   +  + +T N+V+K +C
Sbjct: 341 MEHLSIVSPDVVTYNTLVDACFK---YQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLC 397

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G ++ A+   + M      PD+ TY TL+D  CK   + +A +L+DEM   G      
Sbjct: 398 REGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTF 457

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV------------------------- 298
           T N L+  LCK      A +L+ +   +G +P+EV                         
Sbjct: 458 TLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEM 517

Query: 299 ----------TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
                     TYNTLI GLC  G L +A+  L+ ++    +P++ TY  II+   K G  
Sbjct: 518 SKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDL 577

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
               +    M E  F  +    +TL++GL   GK E A+KL++   EKG K + + Y+ L
Sbjct: 578 EKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTL 637

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I  LC+ G  D A     +M   G   +AFTY+ ++    E+G+  +A  +   + ++  
Sbjct: 638 IQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGK 697

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP--DVVAYSSMIHGLCNAGSVEEA 526
           +     Y  LI    E+ K  +   V +   S G     D  +Y+  +  LC  G ++EA
Sbjct: 698 LSERFSYP-LIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEA 756

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCK-QSNISHS 563
             + +EM  ++     D  TY  L+  L K Q   +H+
Sbjct: 757 KAVLDEM--MQKGMSVDSSTYITLMEGLIKRQKRQTHA 792



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 171/364 (46%), Gaps = 24/364 (6%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN  T+N L+H  C KG L  A+S L  M      P+ VTY T++    + G   +   +
Sbjct: 208 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTL 267

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M++         Y+TL+S   + G  + A  + + M   G +P+   Y+ L  GLC+
Sbjct: 268 LARMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327

Query: 415 VGKPDEAEEILFEMIN-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
            GK DEA ++  EM + +  + +  TY++L+   F+  +   A+ + ++M       + V
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +++++ GLC +G+L EA      M   G  PDV+ Y+++I   C A +V +A  L +EM
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
           +      + D FT N LL  LCK+     + +LL S   RG  PD V+    + A     
Sbjct: 448 V--RSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAY---- 501

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                            FK  +      + + M ++ L+P   T+  +++ LC   ++  
Sbjct: 502 -----------------FKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTE 544

Query: 654 AINK 657
           AI+K
Sbjct: 545 AIDK 548



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 111/276 (40%), Gaps = 27/276 (9%)

Query: 386 AMKLWKQMMEKG-CKPNTVVYSALIDGLCRVGK--PDEAEEILFEMINNGCAANAFTYSS 442
           A +L      +G  +P+    +A++  L R     P  + ++   +I      N +T++ 
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+      G    A+     M       + V Y+ L+   C  G L EAR +  +M   G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P    Y++++      G +++A  +   M       +PD++TYN+L   LC+   +  
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAF--GFEPDLWTYNVLAAGLCQAGKVDE 333

Query: 563 SIDLLNSMMDRG-CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFK 621
           +  L + M       PD+VT N  + A                      FK QR+S    
Sbjct: 334 AFKLKDEMEHLSIVSPDVVTYNTLVDAC---------------------FKYQRSSDALN 372

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
           ++E M  K +     T   VV+ LCR  +++ A+ +
Sbjct: 373 LLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGR 408


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 246/499 (49%), Gaps = 36/499 (7%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           +R+V+ FN +++   + G   RA+E    +   K     P+ +T+N ++   C++G +  
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGM---KTEGPAPDIVTYNTLMNGFCKIGDLFT 70

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A +L  E+ + N EP++ TY TL+D  CK   L++A+ + DEM V    P  VT+  ++N
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLCK+G++  A  +   M   G +PN  +Y TLI  L  +GN+ +A  L  RMV      
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + V Y  +++GL K G A +   +   + E     N   YS LI G  K G       L 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           ++M EK   PN +VYS+++DG  + G  +EA +++ +M+      N F Y +L+ G+F++
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            +   A++++K+M       N       ++ L   G++ EA  ++  M+SRG  PD V Y
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 511 SSMIHGLCNAGSVEEALKLFNEML----------------------CLEPKS-------- 540
           +SM+ G   AG   +A  +  EM                         E +S        
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430

Query: 541 --QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PD  T+N ++NA CK+ N+ +++ LLN M   G  P+ +TCNI +  L    E  + 
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 599 GTDFLNELAIRLFKRQRTS 617
             D LN++ +  F    T+
Sbjct: 491 -MDLLNDMLVMGFHPTPTT 508



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 261/583 (44%), Gaps = 25/583 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ +LI  +   GD    E++L  M  E++ +     ++  I   Y K  L+ EA+ +  
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEM--EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMR 286

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV   +    V  + ++++   +      AL+ +  +   K   +  N    +  +  +
Sbjct: 287 KMVQR-NILPNVFVYGTLIDGYFKADQRGIALDLFKEM---KSRGLEENNFVIDSFVNNL 342

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            R G ++ A +LF++M  R   PD   Y ++MDG  K  +  +A  +  EM         
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V +NVLINGL K G+   +      M   G  P+  T+NT+I+  C +GNL  A+ LL+ 
Sbjct: 403 VAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M +    PN +T   ++  L   G       +L  M    FH     +  ++    K  +
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           A+  + +  Q++  G K +   Y+ LI   CR+G    A  +  +M+  G  A+  TY++
Sbjct: 522 ADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G+  S    KA  +   M       N   Y++L+ GL     ++EA  +  QM  RG
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKSQPDVFTYNILLNALCKQSNI 560
             P+   Y  ++ G    G+++E +KL+ EM+     PK++    TYN+L++   K   +
Sbjct: 642 LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTR----TYNVLISCFAKGKKM 697

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
           S + +L+  M  RG  P+  T +I +    +  + P+     LN    +  KR   +   
Sbjct: 698 SQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE-----LN----KSLKRSYQAEAK 748

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLY 663
           ++ E M +K   P  +T   +   L +P + +A   +  + LY
Sbjct: 749 RLFEEMNEKGFIPCENTLACISFTLAKPGK-KADAQRILNKLY 790


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 210/388 (54%), Gaps = 2/388 (0%)

Query: 191  NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
            N  ++N+VI  VC+LG ++ A  L   M ++   PD+ +Y T+++G C+   LD+   L+
Sbjct: 668  NVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLI 727

Query: 251  DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            ++M+  G  P   T+  +I  LC+  +L  A +    M  +G LP+ + Y TL+ G C +
Sbjct: 728  EKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKR 787

Query: 311  GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
            G++  A      M +    P+ +TY  II+G  ++G  V+  ++   M  R    +   +
Sbjct: 788  GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITF 847

Query: 371  STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
            + L++G  K G  +DA ++   M++ GC PN V Y+ LIDGLC+ G  D A E+L EM  
Sbjct: 848  TELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 907

Query: 431  NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
             G   N FTY+S++ G  +SG   +AV++  +        + V Y+ L+   C+ G++ +
Sbjct: 908  IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 967

Query: 491  ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
            A+ + T+ML +G +P +V ++ +++G C  G +E+  KL N ML       P+  T+N L
Sbjct: 968  AQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA--KGIAPNATTFNCL 1025

Query: 551  LNALCKQSNISHSIDLLNSMMDRGCDPD 578
            +   C ++N+  +  +   M  RG +PD
Sbjct: 1026 VKQYCIRNNLKAATAIYKDMCSRGVEPD 1053



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 220/453 (48%), Gaps = 6/453 (1%)

Query: 154  VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
            V S+++V+N   + G   +    +  I   K   + PN+ T+  +I  +CR+  +  A +
Sbjct: 704  VISYSTVINGYCRFGELDKV---WKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEE 760

Query: 214  LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
             F EM  +   PD   Y TL+DG CK   +  A     EM      P  +T+  +I+G C
Sbjct: 761  AFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 820

Query: 274  KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
            + G++  A KL   M  +G  P+ +T+  L++G C  G++  A  + + M+ + C PN V
Sbjct: 821  QIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVV 880

Query: 334  TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            TY T+I+GL K G       +L  M +     N + Y+++++GL K G  E+A+KL  + 
Sbjct: 881  TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 940

Query: 394  MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
               G   +TV Y+ L+D  C+ G+ D+A+EIL EM+  G      T++ LM GF   G  
Sbjct: 941  EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGML 1000

Query: 454  HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
                ++   M       N   ++ L+   C    L+ A  ++  M SRG +PD   Y ++
Sbjct: 1001 EDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENL 1060

Query: 514  IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
            + G CNA +++EA  LF EM          V TY++L+    K+     + ++ + M   
Sbjct: 1061 VKGHCNARNMKEAWFLFQEM--KGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRD 1118

Query: 574  GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            G   D    + F +  K K + P    D ++E+
Sbjct: 1119 GLAADKEIFD-FFSDTKYKGKRPDTIVDPIDEI 1150



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 229/464 (49%), Gaps = 28/464 (6%)

Query: 194  TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE-NRLDEAVLLLDE 252
             F++  + +   G++  A ++F +M        + +    +  L K+ N+   A+++  E
Sbjct: 600  VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFRE 659

Query: 253  MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
                G      ++N++I+ +C+ G +  A  L+  M LKG  P+ ++Y+T+I+G C  G 
Sbjct: 660  FPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGE 719

Query: 313  LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
            LDK   L+++M      PN  TYG+II  L ++ +  +       M  +    +  +Y+T
Sbjct: 720  LDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTT 779

Query: 373  LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
            L+ G  K G    A K + +M  +   P+ + Y+A+I G C++G   EA ++  EM+  G
Sbjct: 780  LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839

Query: 433  CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
               +  T++ LM G+ ++G    A  +   M +  C  N V Y+ LI GLC++G L  A 
Sbjct: 840  LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899

Query: 493  MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
             +  +M   G +P++  Y+S+++GLC +G++EEA+KL  E       +  D  TY  L++
Sbjct: 900  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA--DTVTYTTLMD 957

Query: 553  ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIRL 610
            A CK   +  + ++L  M+ +G  P +VT N+ +    L   LE   DG   LN      
Sbjct: 958  AYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLE---DGEKLLN------ 1008

Query: 611  FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                           ML K ++P  +T+  +V++ C    ++AA
Sbjct: 1009 --------------WMLAKGIAPNATTFNCLVKQYCIRNNLKAA 1038



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 168/350 (48%), Gaps = 10/350 (2%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRM---RREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
            T+ ++I  +   GD      + + M     E  ++   +F  +   Y KA  +++A R+ 
Sbjct: 811  TYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDII---TFTELMNGYCKAGHIKDAFRVH 867

Query: 142  HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            + M+ +  C   V ++ ++++ + +EG    A E  + +     + + PN  T+N ++  
Sbjct: 868  NHMI-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK---IGLQPNIFTYNSIVNG 923

Query: 202  VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            +C+ G ++ A++L  E        D  TY TLMD  CK   +D+A  +L EM   G  PT
Sbjct: 924  LCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPT 983

Query: 262  PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             VTFNVL+NG C +G L    KL++ M  KG  PN  T+N L+   C++ NL  A ++  
Sbjct: 984  IVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYK 1043

Query: 322  RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             M +    P+  TY  ++ G        +   +   M+ + F V+   YS LI G FK  
Sbjct: 1044 DMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRK 1103

Query: 382  KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            K  +A +++ QM   G   +  ++    D   +  +PD   + + E+I N
Sbjct: 1104 KFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 1153



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 140/286 (48%), Gaps = 23/286 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ +I  + + G+  +A  L   M  KG  P+ + YS +I+G CR G+ D+  +++ +M 
Sbjct: 672 YNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMK 731

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   N++TY S++       K  +A E + +M     + + + Y+ L+ G C+ G +R
Sbjct: 732 QKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIR 791

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A   + +M SR   PDV+ Y+++I G C  G + EA KLF+EMLC     +PD+ T+  
Sbjct: 792 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCR--GLEPDIITFTE 849

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+N  CK  +I  +  + N M+  GC P++VT    +  L       +   D  NEL   
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGL-----CKEGDLDSANELLHE 904

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           ++K                  L P   T+  +V  LC+   I+ A+
Sbjct: 905 MWKIG----------------LQPNIFTYNSIVNGLCKSGNIEEAV 934


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 153/523 (29%), Positives = 264/523 (50%), Gaps = 6/523 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           + F    K  +++   +T+ +LI     +G    +   +  M R   V+       I K 
Sbjct: 109 QFFKWAGKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKV 168

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
            GKA +V +A+ +F+ +     CK T  ++NS++ +++QEG + +  E YN + N    +
Sbjct: 169 LGKAKMVNKALSIFYQIKGR-KCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEG--D 225

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
            LP+T+T++ +I    +LG  D+AI LF EM      P    Y T++    K  R+++A+
Sbjct: 226 CLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKAL 285

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+ EM+  GC  T  T+  LI G+ K G++  A  +  NM  +GC P+ V  N LI+ L
Sbjct: 286 GLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLL 345

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHVN 366
              G L  A+ L + M + +C PN VTY T+I  L +   RA +       M+E     +
Sbjct: 346 GKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPS 405

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + YS LI G  K  + E A+ L ++M EKG  P    Y +LI+ L +  + + A E+  
Sbjct: 406 SFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQ 465

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E+  N   ++A  Y+ ++K   + G+  +AV+++ +M K  C  +   Y+ L+ G+   G
Sbjct: 466 ELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVG 525

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
              EA  +   M   GC PD+ +++ +++G    G  + A+++F  M     K +PDV +
Sbjct: 526 MTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMK--NSKIKPDVVS 583

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           YN +L  L +      +  L+  M  +G + DL+T +  L A+
Sbjct: 584 YNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAV 626



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 233/476 (48%), Gaps = 16/476 (3%)

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
            L++ FI I K +      E+A+ +    VD     R V+    VL + ++    H  ++
Sbjct: 60  TLDERFIRILKIFKWGPDAEKALEVLKLKVDH----RLVRE---VLKIDVE---IHVKIQ 109

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
           F+      K  N   ++ T+  +I  +   G++    +  +EM    C         ++ 
Sbjct: 110 FFKWA--GKRRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVK 167

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CL 294
            L K   +++A+ +  +++   C PT  T+N +I  L + G   +  +L + M  +G CL
Sbjct: 168 VLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCL 227

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+ VTY+ LI      G  D A+SL D M  +   P    Y TI+    KLGR      +
Sbjct: 228 PDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGL 287

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           +  M+E+   +  Y Y+ LI G+ K GK E+A  ++  M+++GCKP+ V+ + LI+ L +
Sbjct: 288 VQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGK 347

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES-GKGHKAVEIWKDMAKNNCVYNEV 473
            G+  +A ++  EM +  C  N  TY++++K  FES  +  +A   ++ M +N  V +  
Sbjct: 348 AGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSF 407

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            YS+LI G C+  ++ +A ++  +M  +G  P   AY S+I+ L  A   E A +LF E+
Sbjct: 408 TYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL 467

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              E         Y +++  L K   +S ++DL N M   GC+PD+   N  ++ +
Sbjct: 468 R--ENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 167/336 (49%), Gaps = 5/336 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + K  GKA  VEEA  +F  M+ E  CK  V   N+++N++ + G    A++ +  
Sbjct: 302 TYTELIKGVGKAGKVEEAYSIFMNMLKE-GCKPDVVLINNLINLLGKAGRLADAIKLFEE 360

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRL-GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
           +   + +   PN +T+N VIK +         A   + +M      P  +TY  L+DG C
Sbjct: 361 M---ESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFC 417

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K NR+++A+LLL+EM   G  P P  +  LIN L K      A +L   +       +  
Sbjct: 418 KTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSAR 477

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y  +I  L   G L +AV L + M    C P+   Y  +++G+V++G   +   +L +M
Sbjct: 478 VYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTM 537

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           EE     +   ++ +++G  + G  + A++++ +M     KP+ V Y+ ++  L R G  
Sbjct: 538 EENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMF 597

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           +EA +++ EM + G   +  TYSS+++   +  + H
Sbjct: 598 EEAAKLMKEMNSKGFEYDLITYSSILEAVGKIDEDH 633



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 23/326 (7%)

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           +  TY  +I+ L + G   +  + +  M      +     S ++  L K      A+ ++
Sbjct: 123 DSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIF 182

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGFFE 449
            Q+  + CKP +  Y+++I  L + G  ++  E+  EM N G C  +  TYS+L+  F +
Sbjct: 183 YQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGK 242

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G+   A+ ++ +M +N        Y+ ++    + G++ +A  +  +M  +GC   V  
Sbjct: 243 LGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYT 302

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ +I G+  AG VEEA  +F  ML  +   +PDV   N L+N L K   ++ +I L   
Sbjct: 303 YTELIKGVGKAGKVEEAYSIFMNML--KEGCKPDVVLINNLINLLGKAGRLADAIKLFEE 360

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQK 629
           M    C P++VT N  + AL E                     + R S  F   E M + 
Sbjct: 361 MESLQCTPNVVTYNTVIKALFE--------------------SKARASEAFLWYEKMKEN 400

Query: 630 FLSPQTSTWERVVQELCRPKRIQAAI 655
            + P + T+  ++   C+  R++ A+
Sbjct: 401 GVVPSSFTYSILIDGFCKTNRVEKAL 426


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/371 (36%), Positives = 208/371 (56%), Gaps = 8/371 (2%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           D YTY  L+   C    L  A+ LL EM Q  G  PTP  +N  ++ LCK+G++  A ++
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           V NM    C P+ VT+NTLI GLC  G LD+A  +LD M  S    N VTY T+INGL  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTV 403
            GR+ +   V+  M       +   Y+ +I G  K G+ + A    ++M ++ GC P+T 
Sbjct: 137 AGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
            YS LI+GLC+     +A+E+L EMI    C A+   +++L+ G+ ++    +A E+   
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M ++ C  + V YS +I GLC  G + +   +  +M+SRGCKPDVV Y+ ++ GLC AG 
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           + EA +L   ML  E    P+  TY+++ + LCK   +  + DLL S+ D+G   D+V  
Sbjct: 314 MVEACRLVKRML--EDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAF 371

Query: 583 NIFLTALKEKL 593
              L ++K++L
Sbjct: 372 ETLLLSVKKRL 382



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/327 (35%), Positives = 176/327 (53%), Gaps = 5/327 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P    +N  +  +C+ G V  A+++ + M    C+PD+ T+ TL+ GLCK  RLDEA  +
Sbjct: 52  PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LDEM+  G     VT+N LINGL   G  G A  ++  M      P+  TYN +IHG C 
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCK 168

Query: 310 KGNLDKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            G +D+A   L+ M   + C P+  TY  +INGL K         +L  M  RK      
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASV 228

Query: 369 I-YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + ++TL+ G  K    + A +L   M+E GC P+ V YS +IDGLCR G  D+   +L +
Sbjct: 229 VAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEK 288

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M++ GC  +  TY+ L+ G  ++GK  +A  + K M ++ C  N V YS++  GLC+  K
Sbjct: 289 MVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDK 348

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMI 514
           L  A  + T +  +G   DVVA+ +++
Sbjct: 349 LDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 186/368 (50%), Gaps = 12/368 (3%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREM---PVRNCEPDIYTYCTLMDGLCKENRLDE 245
           L +  T+ ++++  C  G +  A+ L REM   P     P +Y +   +  LCK  ++ E
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNF--FVHALCKSGKVPE 72

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ ++  M+   C P  VTFN LI GLCK G L  A +++D M   G   N VTYNTLI+
Sbjct: 73  AMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLIN 132

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK-FH 364
           GL   G   +AV ++  M  +   P+  TY  II+G  K G        L  M++R    
Sbjct: 133 GLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCS 189

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            + + YS LI+GL K      A +L ++M+  K C  + V ++ L+DG C+    D A E
Sbjct: 190 PDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARE 249

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L  M+ +GCA +  TYS+++ G    G   K   + + M    C  + V Y+VL+ GLC
Sbjct: 250 LLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC 309

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK+ EA  +  +ML  GC P+ V YS +  GLC    ++ A  L   +   +     D
Sbjct: 310 KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI--RDKGRVTD 367

Query: 544 VFTYNILL 551
           V  +  LL
Sbjct: 368 VVAFETLL 375



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 193/380 (50%), Gaps = 10/380 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS-FIFIFKAYGKAHLVEEAIRLFHT 143
           T++ L++ +  +G+ ++   +L  M ++  +    S + F   A  K+  V EA+ +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D   CK  V +FN+++  + + G    A +  + +   +      N +T+N +I  + 
Sbjct: 80  MKDG-ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEM---ERSGFAANLVTYNTLINGLS 135

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTP 262
             G    A+ + + M      PD  TY  ++ G CK   +D A   L+EM Q  GC P  
Sbjct: 136 SAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMF-LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            T+++LINGLCK+  L +A +L+  M   K C  + V +NTL+ G C   +LD+A  LL 
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLS 252

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M+   C P+ VTY TII+GL + G    G  +L  M  R    +   Y+ L++GL K G
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K  +A +L K+M+E GC PN V YS + DGLC++ K D A ++L  + + G   +   + 
Sbjct: 313 KMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFE 372

Query: 442 SLMKGFFESGKGHKAVEIWK 461
           +L+    +      A + WK
Sbjct: 373 TLLLSVKKRLLDRAAFQKWK 392



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 180/364 (49%), Gaps = 29/364 (7%)

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVDGA 352
           L +  TY  L+   CL G L  A+ LL  M     M P    Y   ++ L K G+  +  
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            V+ +M++     +   ++TLI+GL K G+ ++A ++  +M   G   N V Y+ LI+GL
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM-AKNNCVYN 471
              G+  EA  ++  M       +  TY++++ GF +SG+  +A    ++M  +  C  +
Sbjct: 135 SSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
              YS+LI+GLC+   LR+A  +  +M+ R  C   VVA+++++ G C A  ++ A +L 
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           + ML  E    PDV TY+ +++ LC+  ++     LL  M+ RGC PD+VT  + +T L 
Sbjct: 252 SSML--EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC 309

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
           +  +  +         A RL KR            ML+   +P   T+  V   LC+  +
Sbjct: 310 KAGKMVE---------ACRLVKR------------MLEDGCTPNAVTYSLVFDGLCKIDK 348

Query: 651 IQAA 654
           +  A
Sbjct: 349 LDMA 352


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 267/524 (50%), Gaps = 8/524 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF-IFK 126
           + F    K  +++   +T+  LI+   + G F  +  ++  M R    V+  + +  + K
Sbjct: 80  QFFKWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVK 139

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             GKA +V +A+ +F+  +    CK T  ++NS++ +++QEG + +  E Y+ + N    
Sbjct: 140 ILGKAKMVNKALSVFYQ-IKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCN--EG 196

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           +  P+T+T+++++    +LG  D AI+LF EM      P    Y TL+    K    ++A
Sbjct: 197 DCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKA 255

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L+ EM+  GC PT  T+  LI GL K+G +  A  +  NM   GC P+ V  N LI+ 
Sbjct: 256 LGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINI 315

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHV 365
               G L+ A+ L D+M + KC PN VTY T+I  L +    A + A     M+      
Sbjct: 316 FGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTP 375

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS LI G  K  + E A+ L ++M EKG  P    Y +LI+ L +  + + A E+ 
Sbjct: 376 SSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 435

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+  N   ++A  Y+ ++K   + G+  +AV+++ +M K  C  +   Y+ L+ GL   
Sbjct: 436 LELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRA 495

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G + EA      M   GC PD+ +++ +++GL   G  E+A ++F +M   +   +PD  
Sbjct: 496 GMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMK--DSLIKPDAV 553

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +YN +L +L +      +  L+  M  RG + D +T +  L A+
Sbjct: 554 SYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAV 597



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 241/538 (44%), Gaps = 37/538 (6%)

Query: 110 RREKRV-VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE- 167
           RR+  V  L++ FI I K +      E+A+ +    VD     R V   +  +NV IQ  
Sbjct: 24  RRDPSVRTLDERFIRILKIFKWGPDAEKALEVLKLKVDH-RLVREVLKIDVEINVKIQFF 82

Query: 168 --------------------------GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
                                     GL+    +    +V +    I P  L+   V+K 
Sbjct: 83  KWAGKRRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLS--EVVKI 140

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFP 260
           + +  +V+ A+ +F ++  R C+P   TY +++  L +E   ++   L  EM  +G CFP
Sbjct: 141 LGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFP 200

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             +T++VL++   K G    A +L D M   G  P    Y TL+  +  K   +KA+ L+
Sbjct: 201 DTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLL-AIYFKSGDEKALGLV 259

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             M    C P   TY  +I GL K GR  D   V ++M +     +  + + LI+   K 
Sbjct: 260 QEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKA 319

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP-DEAEEILFEMINNGCAANAFT 439
           G+ EDA+KL+ QM    C PN V Y+ +I  L     P  EA     +M  NG   ++FT
Sbjct: 320 GRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFT 379

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YS L+ GF ++ +  KA+ + ++M +         Y  LI+ L +  +   A  ++ ++ 
Sbjct: 380 YSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELK 439

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
               +     Y+ MI  L   G   EA+ LFNEM  +     PDV+ YN L++ L +   
Sbjct: 440 ENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKI--GCNPDVYAYNALMSGLVRAGM 497

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
           I  +   L +M + GC PDL + NI L  L  +   P+  T+   ++   L K    S
Sbjct: 498 IEEAFSALRTMEENGCTPDLNSHNIILNGLA-RTGRPEQATEMFMKMKDSLIKPDAVS 554



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 179/377 (47%), Gaps = 44/377 (11%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +L+  Y  SGD K+L +V   M+ +       ++  + K  GK+  VE+A  +F  M+
Sbjct: 240 YTTLLAIYFKSGDEKALGLV-QEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNML 298

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            +  CK  V   N+++N+  + G    AL+ ++ +   + +   PN +T+N VIK +   
Sbjct: 299 KD-GCKPDVVLINNLINIFGKAGRLEDALKLFDQM---RSLKCAPNVVTYNTVIKALFES 354

Query: 206 -GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
                 A   F +M      P  +TY  L+DG CK NR+++A+LLL+EM   G  P P  
Sbjct: 355 KAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAA 414

Query: 265 FNVLINGLCKN--------------------------------GELGRAAKLVD---NMF 289
           +  LIN L K                                 G+ GR ++ VD    M 
Sbjct: 415 YCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMK 474

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC P+   YN L+ GL   G +++A S L  M  + C P+  ++  I+NGL + GR  
Sbjct: 475 KIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPE 534

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               + M M++     +   Y+T++  L + G  E+A KL ++M  +G + + + YS+++
Sbjct: 535 QATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSIL 594

Query: 410 DGLCRVGKPDEAEEILF 426
           +    VGK DE +E  F
Sbjct: 595 EA---VGKVDEDDEPNF 608



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 24/286 (8%)

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S ++  L K      A+ ++ Q+  + CKP    Y+++I  L + G  ++  E+  EM N
Sbjct: 135 SEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCN 194

Query: 431 NG-CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            G C  +  TYS L+  F + G+   A+ ++ +M  N        Y+ L+    + G  +
Sbjct: 195 EGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEK 254

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
              +V  +M  +GC P V  Y+ +I GL  +G VE+A  +F  M  L+   +PDV   N 
Sbjct: 255 ALGLV-QEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNM--LKDGCKPDVVLINN 311

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+N   K   +  ++ L + M    C P++VT N  + AL E  +AP          A  
Sbjct: 312 LINIFGKAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFES-KAPASE-------AAS 363

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            F++ + +G            ++P + T+  ++   C+  R++ A+
Sbjct: 364 WFEKMKANG------------VTPSSFTYSILIDGFCKTNRVEKAL 397



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 89/201 (44%), Gaps = 27/201 (13%)

Query: 458 EIWK---DMAKN-NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           E+WK   +M ++  CV      S ++  L +   + +A  V+ Q+ SR CKP    Y+SM
Sbjct: 113 EMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSM 172

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I  L   G  E+  +L++EM C E    PD  TY++L++A  K     ++I L + M   
Sbjct: 173 ILMLMQEGHHEKIHELYHEM-CNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKAN 231

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           G  P   T  I+ T L                    ++ +        +V+ M  K  +P
Sbjct: 232 GLHP---TAKIYTTLLA-------------------IYFKSGDEKALGLVQEMKDKGCAP 269

Query: 634 QTSTWERVVQELCRPKRIQAA 654
              T+  +++ L +  R++ A
Sbjct: 270 TVFTYTELIKGLGKSGRVEDA 290


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 152/513 (29%), Positives = 250/513 (48%), Gaps = 29/513 (5%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+  FH M+   H    +  F  +L  I +   Y   L     +       I P+  
Sbjct: 37  LDDALSSFHRML-HMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKM---DSFGIPPDVY 92

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T  +VI + C L  VD A+ +  ++     +PD  T+ TL+ GLC   ++ EA+ + D+M
Sbjct: 93  TLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKM 152

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  L+NGLCK+ +L  A  L   M  KG  P+  TYN+LIH LC     
Sbjct: 153 VGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEW 212

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
               +LL+ MV SK MPN V+   +++ L K G+  +   V+  M +     +   Y+ L
Sbjct: 213 KHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 272

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + G     + ++A+K++  M+  GC  N V Y+ LI+G C++ + D+A  +  EM     
Sbjct: 273 MDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQEL 332

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  TYS+L+ G    G+   A+ ++ +M     + N V YS+L+  LC++ +L EA  
Sbjct: 333 IPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMA 392

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           +   +      PDV  Y+  I G+C AG +E A  LF+    L P+  QPDV+T+NI++ 
Sbjct: 393 LLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSN---LAPRGLQPDVWTHNIMIR 449

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
            LCK+  +  +  L   M + GC                     ++G  + N +   L +
Sbjct: 450 GLCKRGLLDEASKLFREMDENGC--------------------LRNGCTY-NTITQGLLQ 488

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
             +TS   +++E ML +  S   ST   +V+ L
Sbjct: 489 NNKTSRAIQLLEEMLARGFSADVSTTALLVKML 521



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 219/435 (50%), Gaps = 5/435 (1%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           F+  +     KLG +Q   +TF +L++     G       V  +M  E       ++  +
Sbjct: 109 FALSVLAKILKLG-HQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTL 167

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
                K   + EA+ LF  M+ +      + ++NS+++ +     +       N +V +K
Sbjct: 168 MNGLCKDRQLTEALNLFSEMIAK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSK 226

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              I+PN ++ N+V+  +C+ G V  A  +   M     EPD+ TY  LMDG C  + +D
Sbjct: 227 ---IMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD 283

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EAV + D M  +GC    V++N LING CK   + +A  L + M  +  +PN +TY+TLI
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           HGLC  G L  A++L + MVA   +PN VTY  +++ L K  R  +   +L ++E     
Sbjct: 344 HGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLD 403

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +  +Y+  I G+ + G  E A  L+  +  +G +P+   ++ +I GLC+ G  DEA ++
Sbjct: 404 PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKL 463

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             EM  NGC  N  TY+++ +G  ++ K  +A+++ ++M       +    ++L+  L +
Sbjct: 464 FREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSD 523

Query: 485 DGKLREARMVWTQML 499
           DG  +  + +  + +
Sbjct: 524 DGLDQSVKQILCEFM 538



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 204/415 (49%), Gaps = 42/415 (10%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F +++  +   G    AL+ ++ +V        PN +T+  ++  +C+   +  A+ LF
Sbjct: 128 TFTTLVRGLCVVGKIGEALDVFDKMVGE---GFQPNVVTYGTLMNGLCKDRQLTEALNLF 184

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  +   PDI+TY +L+  LC          LL+EM      P  V+ N++++ LCK 
Sbjct: 185 SEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKE 244

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G++  A  +VD M   G  P+ VTY  L+ G CL+  +D+AV + D MV + C+ N V+Y
Sbjct: 245 GKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSY 304

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+ING  K+ R      +   M  ++   N   YSTLI GL   G+ +DA+ L+ +M+ 
Sbjct: 305 NTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVA 364

Query: 396 KGCKPNTVVYSAL-----------------------------------IDGLCRVGKPDE 420
            G  PN V YS L                                   IDG+CR G  + 
Sbjct: 365 CGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEA 424

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A ++   +   G   + +T++ +++G  + G   +A +++++M +N C+ N   Y+ +  
Sbjct: 425 ARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQ 484

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           GL ++ K   A  +  +ML+RG   DV   + ++  L + G +++++K   ++LC
Sbjct: 485 GLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG-LDQSVK---QILC 535



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 154/300 (51%), Gaps = 16/300 (5%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ L++ + K       + L K+M   G  P+    + +I+  C + + D A  +L +++
Sbjct: 59  FAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKIL 118

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  T+++L++G    GK  +A++++  M       N V Y  L++GLC+D +L 
Sbjct: 119 KLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLT 178

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  ++++M+++G  PD+  Y+S+IH LCN    +    L NEM+  + K  P+V + NI
Sbjct: 179 EALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV--KSKIMPNVVSLNI 236

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFL---- 603
           +++ALCK+  ++ + D+++ M+  G +PD+VT    +    L+ +++      D +    
Sbjct: 237 VVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNG 296

Query: 604 --------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                   N L     K QR      + E M ++ L P T T+  ++  LC   R+Q AI
Sbjct: 297 CVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAI 356


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 148/499 (29%), Positives = 246/499 (49%), Gaps = 36/499 (7%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           +R+V+ FN +++   + G   RA+E    +   K     P+ +T+N ++   C++G +  
Sbjct: 14  RRSVEHFNVLIDGYCRNGEISRAVELLEGM---KTEGPAPDIVTYNTLMNGFCKIGDLFT 70

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A +L  E+ + N EP++ TY TL+D  CK   L++A+ + DEM V    P  VT+  ++N
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLCK+G++  A  +   M   G +PN  +Y TLI  L  +GN+ +A  L  RMV      
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + V Y  +++GL K G A +   +   + E     N   YS LI G  K G       L 
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           ++M EK   PN +VYS+++DG  + G  +EA +++ +M+      N F Y +L+ G+F++
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            +   A++++K+M       N       ++ L   G++ EA  ++  M+SRG  PD V Y
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 511 SSMIHGLCNAGSVEEALKLFNEML----------------------CLEPKS-------- 540
           +SM+ G   AG   +A  +  EM                         E +S        
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430

Query: 541 --QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PD  T+N ++NA CK+ N+ +++ LLN M   G  P+ +TCNI +  L    E  + 
Sbjct: 431 GLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKT 490

Query: 599 GTDFLNELAIRLFKRQRTS 617
             D LN++ +  F    T+
Sbjct: 491 -MDLLNDMLVMGFHPTPTT 508



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 146/583 (25%), Positives = 260/583 (44%), Gaps = 25/583 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ +LI  +   GD    E++L  M  E++ +     ++  I   Y K  L+ EA+ +  
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEM--EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMR 286

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV   +    V  + ++++   +      AL+ +  +   K   +  N    +  +  +
Sbjct: 287 KMVQR-NILPNVFVYGTLIDGYFKADQRGIALDLFKEM---KSRGLEENNFVIDSFVNNL 342

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            R G ++ A +LF++M  R   PD   Y ++MDG  K  +  +A  +  EM         
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V +NVLINGL K G+   +      M   G  P+  T+NT+I+  C +GNL  A+ LL+ 
Sbjct: 403 VAYNVLINGLFKLGKY-ESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M +    PN +T   ++  L   G       +L  M    FH     +  ++    K  +
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           A+  +    Q++  G K +   Y+ LI   CR+G    A  +  +M+  G  A+  TY++
Sbjct: 522 ADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G+  S    KA  +   M       N   Y++L+ GL     ++EA  +  QM  RG
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKSQPDVFTYNILLNALCKQSNI 560
             P+   Y  ++ G    G+++E +KL+ EM+     PK++    TYN+L++   K   +
Sbjct: 642 LVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTR----TYNVLISCFAKGKKM 697

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
           S + +L+  M  RG  P+  T +I +    +  + P+     LN    +  KR   +   
Sbjct: 698 SQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPE-----LN----KSLKRSYQAEAK 748

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLY 663
           ++ E M +K   P  +T   +   L +P + +A   +  + LY
Sbjct: 749 RLFEEMNEKGFIPCENTLACISFTLAKPGK-KADAQRILNKLY 790


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  236 bits (601), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/493 (29%), Positives = 257/493 (52%), Gaps = 7/493 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  +   + K   V+ A   F  M+ ++     V S+N +L+ +   G    ALEF N 
Sbjct: 272 SFNALMSGFCKMGSVDVAKSFFCMMI-KYGLLPDVYSYNILLHGLCVAGSMEEALEFTND 330

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + N     + P+ +T+N++      LGL+  A ++ + M +    PD+ TY  L+ G C+
Sbjct: 331 MENH---GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              ++E+  L ++M   G   + VT+ VL++ LCK+G +  A  L+  M + G  P+ +T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+ LIHGLC +G +++A+ L + M + +  PN      II+GL + G   +      S+ 
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +        +Y+ +I G  K G   +A++ +KQ++EKG  P  V +++LI G C+ GK  
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA ++L  +  +G    + TY++LM G+ E G  H   ++  +M        ++ Y+V++
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 627

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GLC++G+L E+  +   M +RG  PD + Y+++I   C A  +++A +L N+M  L+  
Sbjct: 628 KGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM--LQHS 685

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            QP   TYN+L+N LC   N+  +  LL ++ D+      V     + A   K +  Q+ 
Sbjct: 686 LQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV-QNA 744

Query: 600 TDFLNELAIRLFK 612
             F +++  R F+
Sbjct: 745 LVFFHQMVERGFE 757



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/458 (29%), Positives = 222/458 (48%), Gaps = 25/458 (5%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ ++FN ++   C++G VD A   F  M      PD+Y+Y  L+ GLC    ++EA+  
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            ++M+  G  P  VT+N+L NG    G +  A K+V  M L G  P+ VTY  LI G C 
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            GN++++  L ++M++     + VTY  +++ L K GR  +   +L  ME      +   
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS LI GL K G  E+A++L+++M  K   PN+ V SA+I GL   G   EA+     + 
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            +  A     Y+ ++ G+ + G   +AV  +K + +       V ++ LI+G C+ GKL 
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYN 548
           EA  +   +   G  P  V Y+++++G C  G +     + +EM   E K+ +P   TY 
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEM---EAKAIKPTQITYT 624

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           +++  LCK+  +  S+ LL  M  RG  PD +T N  + +                    
Sbjct: 625 VVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQS-------------------- 664

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              K       F++   MLQ  L P   T+  ++  LC
Sbjct: 665 -FCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLC 701



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 140/532 (26%), Positives = 253/532 (47%), Gaps = 38/532 (7%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL--EFYNHIVNAK 184
           AY +A +V +A+ +   M    + + ++ ++NS+L       L H  +  + YN I   K
Sbjct: 177 AYSRAEMVHDALFVLAKM-KVLNLQVSIATYNSLL-----YNLRHTDIMWDVYNEI---K 227

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              +  N  T  ++I  +CR   + +A+   RE       P + ++  LM G CK   +D
Sbjct: 228 ASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVD 287

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            A      M   G  P   ++N+L++GLC  G +  A +  ++M   G  P+ VTYN L 
Sbjct: 288 VAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILA 347

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +G  + G +  A  ++ RM+ +   P+ VTY  +I G  ++G   +  ++   M  +   
Sbjct: 348 NGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLK 407

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           ++   Y+ L+S L K G+ ++A+ L  +M   G KP+ + YS LI GLC+ G  +EA E+
Sbjct: 408 LSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIEL 467

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             EM +     N+F  S+++ G FE G   +A   +  + K++     + Y+++I G  +
Sbjct: 468 YEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAK 527

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKSQP 542
            G + EA   + Q++ +G  P +V ++S+I+G C  G + EA+KL + +    L P S  
Sbjct: 528 LGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS-- 585

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
              TY  L+N  C++ ++    D+L+ M  +   P  +T  + +                
Sbjct: 586 --VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKG-------------- 629

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  L K  R     ++++ M  + L P   T+  V+Q  C+   +Q A
Sbjct: 630 -------LCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKA 674



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 215/435 (49%), Gaps = 37/435 (8%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+ ++I   C++G ++ + +L  +M  +  +  I TY  L+  LCK  R+DEAV+L
Sbjct: 373 PDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVIL 432

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE------------ 297
           L EM+V G  P  +T++VLI+GLCK G +  A +L + M  K   PN             
Sbjct: 433 LHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFE 492

Query: 298 -----------------------VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
                                  + YN +I G    GN+ +AV    +++     P  VT
Sbjct: 493 KGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVT 552

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           + ++I G  K G+  +  ++L +++          Y+TL++G  +EG       +  +M 
Sbjct: 553 FNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEME 612

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            K  KP  + Y+ ++ GLC+ G+  E+ ++L  M   G   +  TY+++++ F ++    
Sbjct: 613 AKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQ 672

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           KA ++   M +++   + V Y+VLI+GLC  G L++A  +   +  +  +   VAY+++I
Sbjct: 673 KAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTII 732

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
              C  G V+ AL  F++M  +E   +  +  Y+ ++N LCK++ I+ +      M+  G
Sbjct: 733 KAHCAKGDVQNALVFFHQM--VERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHG 790

Query: 575 CDPDLVTCNIFLTAL 589
             PD   C + L A 
Sbjct: 791 IPPDQDICLVMLNAF 805


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 260/522 (49%), Gaps = 9/522 (1%)

Query: 67  DEIFNSTPKLGSYQLGDSTFY--SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           D+ +    K+G +    + F   +LI      GD    E++   M          ++  +
Sbjct: 347 DDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSIL 406

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             ++ ++  ++ AI  F  M+ +     TV ++NS++N   + G    A   +  + N  
Sbjct: 407 IDSFCRSGRLDVAISYFDRMIQD-GIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK- 464

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              + P   TF  +I   C+   V  A +L+ +M      P++YT+  L+ GLC  N++ 
Sbjct: 465 --GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMA 522

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L DE+      PT VT+NVLI G C++G++ +A +L+++M  KG +P+  TY  LI
Sbjct: 523 EASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLI 582

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLC  G + KA   +D +       NE+ Y  +++G  + GR ++       M +R  +
Sbjct: 583 SGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGIN 642

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           ++   ++ LI G  K+   +    L K M ++G +P+ V+Y+++ID   + G   +A E 
Sbjct: 643 MDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFEC 702

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              M+   C  N  TY++LM G  ++G+  +A  ++K M   N   N + Y   +  L +
Sbjct: 703 WDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTK 762

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +G ++EA  +   ML +G   + V ++ +I G C  G   EA K+ +EM   E    PD 
Sbjct: 763 EGNMKEAIGLHHAML-KGLLANTVTHNIIIRGFCKLGRFHEATKVLSEMT--ENGIFPDC 819

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            TY+ L+   C+  N+  S+ L ++M++RG +PDLV  N+ +
Sbjct: 820 VTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLI 861



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 151/541 (27%), Positives = 252/541 (46%), Gaps = 20/541 (3%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E  I+L   MV E     T  + + +++ + ++G    A E    +V       +PN   
Sbjct: 312 EAGIQLMDEMV-ELGFSPTEAAVSGLVDGLRKQGKIDDAYEL---VVKVGRFGFVPNLFV 367

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I ++C+ G +D A  L+  M + N  P+  TY  L+D  C+  RLD A+   D M 
Sbjct: 368 YNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMI 427

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            DG   T   +N LING CK G+L  A  L   M  KG  P   T+ +LI G C    + 
Sbjct: 428 QDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQ 487

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA  L ++M+ +   PN  T+  +I+GL    +  + + +   + ERK    E  Y+ LI
Sbjct: 488 KAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLI 547

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G  ++GK + A +L + M +KG  P+T  Y  LI GLC  G+  +A++ + ++      
Sbjct: 548 EGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVK 607

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N   YS+L+ G+ + G+  +A+    +M +     + VC++VLI G  +    +    +
Sbjct: 608 LNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDL 667

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
              M  +G +PD V Y+SMI      GS ++A + ++ M+  E    P+V TY  L+N L
Sbjct: 668 LKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEE--CFPNVVTYTALMNGL 725

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD------------GTDF 602
           CK   +  +  L   M      P+ +T   FL  L ++    +                 
Sbjct: 726 CKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANTV 785

Query: 603 LNELAIRLF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSN 661
            + + IR F K  R     K++  M +  + P   T+  ++ E CR   + A++ K W  
Sbjct: 786 THNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASV-KLWDT 844

Query: 662 L 662
           +
Sbjct: 845 M 845



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 247/514 (48%), Gaps = 25/514 (4%)

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +  MV      R     NS+L+ ++    + + +  ++H +++       +TL FNL+++
Sbjct: 106 YAIMVHALVHSRLFWPANSLLHTLLLRESHPKCV--FSHFLDSYKRCKFSSTLGFNLLVQ 163

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
                  + +A+ + + M   N  P++ T   L++GL K  +      L DE    G  P
Sbjct: 164 NYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRP 223

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
            P T + ++  +C+  +  RA + +  M   G   + VTYN LIHGLC    + +AV + 
Sbjct: 224 DPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVK 283

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             +       + VTY T++ G  +L +   G +++  M E  F   E   S L+ GL K+
Sbjct: 284 RSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQ 343

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK +DA +L  ++   G  PN  VY+ALI+ LC+ G  D+AE +   M       N  TY
Sbjct: 344 GKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITY 403

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           S L+  F  SG+   A+  +  M ++        Y+ LI+G C+ G L  A  ++ +M +
Sbjct: 404 SILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTN 463

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           +G +P    ++S+I G C    V++A KL+N+M  ++    P+V+T+  L++ LC  + +
Sbjct: 464 KGVEPTATTFTSLISGYCKDLQVQKAFKLYNKM--IDNGITPNVYTFTALISGLCSTNKM 521

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
           + + +L + +++R   P  VT N+ +          +DG               +    F
Sbjct: 522 AEASELFDELVERKIKPTEVTYNVLIEGY------CRDG---------------KIDKAF 560

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +++E M QK L P T T+  ++  LC   R+  A
Sbjct: 561 ELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKA 594



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 210/457 (45%), Gaps = 40/457 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI      GD  + E +   M  +       +F  +   Y K   V++A +L++ M
Sbjct: 437 AYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKM 496

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +D       V +F ++++ +        A E ++ +V  K   I P  +T+N++I+  CR
Sbjct: 497 IDN-GITPNVYTFTALISGLCSTNKMAEASELFDELVERK---IKPTEVTYNVLIEGYCR 552

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +D A +L  +M  +   PD YTY  L+ GLC   R+ +A   +D++         + 
Sbjct: 553 DGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMC 612

Query: 265 FNVLINGLCKNGELGRA-------------------AKLVD----------------NMF 289
           ++ L++G C+ G L  A                   A L+D                +M 
Sbjct: 613 YSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMH 672

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            +G  P+ V Y ++I     +G+  KA    D MV  +C PN VTY  ++NGL K G   
Sbjct: 673 DQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMD 732

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               +   M+      N   Y   +  L KEG  ++A+ L   M+ KG   NTV ++ +I
Sbjct: 733 RAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTHNIII 791

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            G C++G+  EA ++L EM  NG   +  TYS+L+  +  SG    +V++W  M      
Sbjct: 792 RGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLE 851

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
            + V Y++LI+G C +G+L +A  +   ML RG  PD
Sbjct: 852 PDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 262/534 (49%), Gaps = 27/534 (5%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  + + Y +A  + E    F  +     C  ++ + N++L  I++ G    A + Y   
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCV-SINACNALLGAIVKVGWVDLAWKVYEDF 215

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V  K  NI+ N  T N+++  +C+ G +DN      EM  +    D+ TY TL++  C+ 
Sbjct: 216 V--KSGNIV-NVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRR 272

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             + EA  L+D M   G  P   T+N LINGLCK G   RA +++D M   G  PN  T+
Sbjct: 273 GLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATF 332

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N ++   C K ++ +A  + + M+    +P+ +++ +I+    + G           M+ 
Sbjct: 333 NPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKG 392

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                +  IY+ LI+G  +      A+K+  +M+E+GC  + V Y+ L++GLCR    D+
Sbjct: 393 VGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDD 452

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A+E+  EM+  G   + +T ++L+ G+ + G   KA+ +++ M   +   + V Y+ L+ 
Sbjct: 453 ADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMD 512

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C+ G++ +A+ +W  M+SR   P  +++S +I+G C+ G V EA +L++EM   E   
Sbjct: 513 GFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMK--EKGI 570

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           +P + T N ++    +  N+S + D LN+M+  G  PD +T N  + +            
Sbjct: 571 KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINS------------ 618

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      K +     F ++  M ++ L P   T+  ++    R  R+Q A
Sbjct: 619 ---------FVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEA 663



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 224/455 (49%), Gaps = 6/455 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  AY +  LV EA  L   M  +   K  + ++N+++N + +EG Y RA    + ++  
Sbjct: 265 LVNAYCRRGLVSEAFGLVDCMAGK-GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLG- 322

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
             + + PN  TFN ++   CR   V  A ++F EM  R   PD+ ++ +++    +   L
Sbjct: 323 --VGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGEL 380

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
             A+   ++M+  G  P  V + +LING C+N ++  A K+ + M  +GC+ + VTYNTL
Sbjct: 381 GRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTL 440

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++GLC    LD A  L   MV     P+  T  T+I+G  K G       +  +M  R  
Sbjct: 441 LNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSL 500

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TL+ G  K G+ E A +LW  M+ +   P+ + +S LI+G C +G   EA  
Sbjct: 501 KPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFR 560

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EM   G      T ++++KG+  +G   KA +    M       + + Y+ LI+   
Sbjct: 561 LWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFV 620

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           ++     A  +   M  RG  P++V Y++++ G    G ++EA  + ++M+  +    PD
Sbjct: 621 KEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMI--DKGINPD 678

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             TY  L+N    + N+  +  + + M+ RG  PD
Sbjct: 679 KSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/438 (22%), Positives = 175/438 (39%), Gaps = 74/438 (16%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE--------------------VT 334
           PN     TLIH L     L +A SLL R++    + +                     V 
Sbjct: 97  PNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVV 156

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           +  +I   V+  +  +G+     + +R F V+    + L+  + K G  + A K+++  +
Sbjct: 157 FDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFV 216

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           + G   N    + +++ LC+ GK D     L EM   G  A+  TY++L+  +   G   
Sbjct: 217 KSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVS 276

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR------------------------- 489
           +A  +   MA          Y+ LI+GLC++G                            
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 490 ----------EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
                     EA  V+ +ML RG  PD++++SS++      G +  AL  F +M  +   
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV--G 394

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             PD   Y IL+N  C+  ++S ++ + N M++RGC  D+VT N  L  L    +   D 
Sbjct: 395 LVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG-KMLDDA 453

Query: 600 TDFLNELAIR-LF--------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            +   E+  R +F              K    +    + E M  + L P   T+  ++  
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513

Query: 645 LCRPKRIQAAINKCWSNL 662
            C+   ++ A  + W ++
Sbjct: 514 FCKVGEMEKA-KELWYDM 530



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 124/269 (46%), Gaps = 9/269 (3%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDF-KSLEMV-LYRMRREKRVVLEKSFIF 123
           +DE+F    + G +     T  +LI  Y   G+  K+L +     +R  K  V+  ++  
Sbjct: 453 ADELFKEMVERGVFP-DFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVV--TYNT 509

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   + K   +E+A  L++ M+       +  SF+ ++N     GL   A   ++ +   
Sbjct: 510 LMDGFCKVGEMEKAKELWYDMISR-EIFPSYISFSILINGFCSLGLVSEAFRLWDEM--- 565

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I P  +T N +IK   R G +  A      M      PD  TY TL++   KE   
Sbjct: 566 KEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENF 625

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A  L++ M+  G  P  VT+N ++ G  ++G +  A  ++  M  KG  P++ TY +L
Sbjct: 626 DRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSL 685

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           I+G   K N+ +A  + D M+    +P++
Sbjct: 686 INGYVSKDNMKEAFRVHDEMLQRGFVPDD 714


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 137/371 (36%), Positives = 208/371 (56%), Gaps = 8/371 (2%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           D YTY  L+   C    L  A+ LL EM Q  G  PTP  +N  ++ LCK+G++  A ++
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           V NM    C P+ VT+NTLI GLC  G LD+A  +LD M  S    N VTY T+INGL  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTV 403
            GR+ +   V+  M       +   Y+ +I G  K G+ + A    ++M ++ GC P+T 
Sbjct: 137 AGRSGEAVLVMQGMTTTP---DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
            YS LI+GLC+     +A+E+L EMI    C A+   +++L+ G+ ++    +A E+   
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M ++ C  + V YS +I GLC  G + +   +  +M+SRGCKPDVV Y+ ++ GLC AG 
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           + EA +L   M  LE    P+  TY+++ + LCK   +  + DLL S+ D+G   D+V  
Sbjct: 314 MVEACRLVKRM--LEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAF 371

Query: 583 NIFLTALKEKL 593
              L ++K++L
Sbjct: 372 EALLLSVKKRL 382



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 117/327 (35%), Positives = 176/327 (53%), Gaps = 5/327 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P    +N  +  +C+ G V  A+++ + M    C+PD+ T+ TL+ GLCK  RLDEA  +
Sbjct: 52  PTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQV 111

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LDEM+  G     VT+N LINGL   G  G A  ++  M      P+  TYN +IHG C 
Sbjct: 112 LDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCK 168

Query: 310 KGNLDKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            G +D+A   L+ M   + C P+  TY  +INGL K         +L  M  RK      
Sbjct: 169 SGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASV 228

Query: 369 I-YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + ++TL+ G  K    + A +L   M+E GC P+ V YS +IDGLCR G  D+   +L +
Sbjct: 229 VAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEK 288

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M++ GC  +  TY+ L+ G  ++GK  +A  + K M ++ C  N V YS++  GLC+  K
Sbjct: 289 MVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDK 348

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMI 514
           L  A  + T +  +G   DVVA+ +++
Sbjct: 349 LDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 180/350 (51%), Gaps = 10/350 (2%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREM---PVRNCEPDIYTYCTLMDGLCKENRLDE 245
           L +  T+ ++++  C  G +  A+ L REM   P     P +Y +   +  LCK  ++ E
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNF--FVHALCKSGKVPE 72

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ ++  M+   C P  VTFN LI GLCK G L  A +++D M   G   N VTYNTLI+
Sbjct: 73  AMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLIN 132

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK-FH 364
           GL   G   +AV ++  M  +   P+  TY  II+G  K G        L  M++R    
Sbjct: 133 GLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCS 189

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            + + YS LI+GL K      A +L ++M+  K C  + V ++ L+DG C+    D A E
Sbjct: 190 PDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARE 249

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L  M+ +GCA +  TYS+++ G    G   K   + + M    C  + V Y+VL+ GLC
Sbjct: 250 LLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC 309

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           + GK+ EA  +  +ML  GC P+ V YS +  GLC    ++ A  L   +
Sbjct: 310 KAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI 359



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 193/380 (50%), Gaps = 10/380 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS-FIFIFKAYGKAHLVEEAIRLFHT 143
           T++ L++ +  +G+ ++   +L  M ++  +    S + F   A  K+  V EA+ +   
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D   CK  V +FN+++  + + G    A +  + +   +      N +T+N +I  + 
Sbjct: 80  MKDG-ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEM---ERSGFAANLVTYNTLINGLS 135

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTP 262
             G    A+ + + M      PD  TY  ++ G CK   +D A   L+EM Q  GC P  
Sbjct: 136 SAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDT 192

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMF-LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            T+++LINGLCK+  L +A +L+  M   K C  + V +NTL+ G C   +LD+A  LL 
Sbjct: 193 FTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLS 252

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M+   C P+ VTY TII+GL + G    G  +L  M  R    +   Y+ L++GL K G
Sbjct: 253 SMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAG 312

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K  +A +L K+M+E GC PN V YS + DGLC++ K D A ++L  + + G   +   + 
Sbjct: 313 KMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFE 372

Query: 442 SLMKGFFESGKGHKAVEIWK 461
           +L+    +      A + WK
Sbjct: 373 ALLLSVKKRLLDRAAFQKWK 392



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 180/364 (49%), Gaps = 29/364 (7%)

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVDGA 352
           L +  TY  L+   CL G L  A+ LL  M     M P    Y   ++ L K G+  +  
Sbjct: 15  LFDNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAM 74

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            V+ +M++     +   ++TLI+GL K G+ ++A ++  +M   G   N V Y+ LI+GL
Sbjct: 75  EVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGL 134

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM-AKNNCVYN 471
              G+  EA  ++  M       +  TY++++ GF +SG+  +A    ++M  +  C  +
Sbjct: 135 SSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPD 191

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
              YS+LI+GLC+   LR+A  +  +M+ R  C   VVA+++++ G C A  ++ A +L 
Sbjct: 192 TFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELL 251

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           + ML  E    PDV TY+ +++ LC+  ++     LL  M+ RGC PD+VT  + +T L 
Sbjct: 252 SSML--EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLC 309

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
           +  +  +         A RL KR            ML+   +P   T+  V   LC+  +
Sbjct: 310 KAGKMVE---------ACRLVKR------------MLEDGCTPNAVTYSLVFDGLCKIDK 348

Query: 651 IQAA 654
           +  A
Sbjct: 349 LDMA 352


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 158/572 (27%), Positives = 274/572 (47%), Gaps = 25/572 (4%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
           F +  ++L    R   +V+ +    + K       V EA+ +    + E  C+  V S+N
Sbjct: 104 FAAFGLILKTGWRVDDIVVNQ----LLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYN 159

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           ++L  +        A E  + +V+ +  +  P+ +++N+VI      G VD A  LF EM
Sbjct: 160 TLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM 219

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
            V    PD+ TY T++DGLCK   +D A  +  +M   G  P  VT+N +I+GLCK  E+
Sbjct: 220 GV---SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEV 276

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A  +   M  KG  P+ VTYNT+I GLC    +D+A  +  +M+     P+ VTY TI
Sbjct: 277 DMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTI 336

Query: 339 INGLVKLGRAVDGAR-VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           I+GL K  +A+D A  V   M ++    +   Y+ +I GL K    + A  +++QM++KG
Sbjct: 337 IDGLCK-AQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKG 395

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            KPN   Y+ LI G    G+ +E  + + EM  +    + FTY  L+    ++GK ++A 
Sbjct: 396 VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEAR 455

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            ++  M +     +   Y +++HG  + G L E   +   M++ G  P+   ++++I   
Sbjct: 456 SLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAY 515

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
                ++E + +F +M   +    P+V TY  L++ALCK   +  ++   N M++ G  P
Sbjct: 516 AKRAMIDEVMHIFIKM--KQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTP 573

Query: 578 DLVTCNIFLTAL-----KEKLE---------APQDGTDFLNELAIRLFKRQRTSGGFKIV 623
           + V  N  +  L      EK+E           +    F N +   L K  R     +++
Sbjct: 574 NNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLI 633

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           + M+   L P   ++  ++   C   R+  A+
Sbjct: 634 DSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665



 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 155/552 (28%), Positives = 262/552 (47%), Gaps = 51/552 (9%)

Query: 73  TPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH 132
           +P + SY +       +I  + N G       +   M     VV   ++  I     KA 
Sbjct: 190 SPDVVSYNI-------VINGFFNEGQVDKAYSLFLEMGVSPDVV---TYNTIIDGLCKAQ 239

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
            V+ A  +F  MV++   K    ++N++++ + +      A   +  +V+     + P+ 
Sbjct: 240 EVDRAEDVFQQMVEK-GVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDK---GVKPSN 295

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T+N +I  +C+   VD A  +F++M  R  +PD  TY T++DGLCK   +D+A  +  +
Sbjct: 296 VTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQ 355

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG------ 306
           M   G  P  +T+ ++I+GLCK   + RA  +   M  KG  PN  TYN LIHG      
Sbjct: 356 MIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ 415

Query: 307 -----------------------------LCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
                                        LC  G  ++A SL D M+     P+   YG 
Sbjct: 416 WEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGI 475

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +++G  K G   +   +L  M       N  I++T+I    K    ++ M ++ +M ++G
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             PN V Y  LID LC++G+ D+A     +MIN G   N   ++SL+ G     K  K  
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVE 595

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E++ +M       + V ++ ++  LC++G++ EAR +   M+  G KPDV++Y+++I G 
Sbjct: 596 ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGH 655

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C A  ++EA+KL + M+    K  P++ +YN LL+  CK   I ++  L   M+ +G  P
Sbjct: 656 CFASRMDEAVKLLDGMVSAGLK--PNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTP 713

Query: 578 DLVTCNIFLTAL 589
            + T N  L  L
Sbjct: 714 GVETYNTILNGL 725



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 250/522 (47%), Gaps = 41/522 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I     + +    E V  +M  +       ++  I     KA  V+ A  +F  M
Sbjct: 227 TYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKM 286

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           VD+   K +  ++N++++ + +     RA   +  +++     + P+ +T+N +I  +C+
Sbjct: 287 VDK-GVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDR---GVKPDHVTYNTIIDGLCK 342

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A  +F++M  +  +PD  TY  ++DGLCK   +D A  +  +M   G  P   T
Sbjct: 343 AQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGT 402

Query: 265 FNVLING-----------------------------------LCKNGELGRAAKLVDNMF 289
           +N LI+G                                   LCKNG+   A  L D+M 
Sbjct: 403 YNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMI 462

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            KG  P+   Y  ++HG   KG L +   LL+ MVA+   PN   + T+I    K     
Sbjct: 463 RKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMID 522

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +   + + M+++    N   Y TLI  L K G+ +DA+  + QM+ +G  PN VV+++L+
Sbjct: 523 EVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLV 582

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC V K ++ EE+  EM+N G   +   +++++    + G+  +A  +   M      
Sbjct: 583 YGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLK 642

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + + Y+ LI G C   ++ EA  +   M+S G KP++V+Y++++HG C AG ++ A  L
Sbjct: 643 PDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCL 702

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           F EM  L     P V TYN +LN L +    S + +L  +M+
Sbjct: 703 FREM--LRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 234/509 (45%), Gaps = 51/509 (10%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL-----YHRALEFYN 178
           I     KA  +++A  +F  M+D     + VK  N    +II +GL       RA   + 
Sbjct: 336 IIDGLCKAQAIDKAEGVFQQMID-----KGVKPDNLTYTIII-DGLCKAQSVDRAEGVFQ 389

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +++     + PN  T+N +I      G  +  +Q  +EM   + EPD++TY  L+D LC
Sbjct: 390 QMIDK---GVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLC 446

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K  + +EA  L D M   G  P+   + ++++G  K G L     L++ M   G  PN  
Sbjct: 447 KNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHR 506

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            +NT+I     +  +D+ + +  +M      PN VTYGT+I+ L KLGR  D       M
Sbjct: 507 IFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQM 566

Query: 359 EERKFHVNEYIYSTLISGLF-----------------------------------KEGKA 383
                  N  ++++L+ GL                                    KEG+ 
Sbjct: 567 INEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRV 626

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +A +L   M+  G KP+ + Y+ LIDG C   + DEA ++L  M++ G   N  +Y++L
Sbjct: 627 MEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTL 686

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G+ ++G+   A  ++++M +         Y+ +++GL   G+  EAR ++  M+    
Sbjct: 687 LHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRK 746

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
              +  YS ++ G C     +EA K+F  +  ++   Q D+ T+NI+++ L K      +
Sbjct: 747 LWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDL--QLDIITFNIMIDGLFKGGRKEDA 804

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +DL  ++   G  P +VT  +    L E+
Sbjct: 805 MDLFAAIPANGLVPSVVTYRLIAENLIEE 833



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 139/566 (24%), Positives = 261/566 (46%), Gaps = 53/566 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I     KA  V+ A  +F  M+D+   K    ++N +++  +  G +    E    
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDK-GVKPNNGTYNCLIHGYLSTGQWE---EVVQR 422

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I      ++ P+  T+ L++  +C+ G  + A  LF  M  +  +P +  Y  ++ G  K
Sbjct: 423 IKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGK 482

Query: 240 ENRL-----------------------------------DEAVLLLDEMQVDGCFPTPVT 264
           +  L                                   DE + +  +M+  G  P  VT
Sbjct: 483 KGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVT 542

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+ LCK G +  A    + M  +G  PN V +N+L++GLC     +K   L   M+
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML 602

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ V + T++  L K GR ++  R++ SM       +   Y+TLI G     + +
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMD 662

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+KL   M+  G KPN V Y+ L+ G C+ G+ D A  +  EM+  G      TY++++
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G F SG+  +A E++ +M K+  +++   YS+++ G C++    EA  ++  + S   +
Sbjct: 723 NGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQ 782

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISH 562
            D++ ++ MI GL   G  E+A+ LF  +    P +   P V TY ++   L ++ ++  
Sbjct: 783 LDIITFNIMIDGLFKGGRKEDAMDLFAAI----PANGLVPSVVTYRLIAENLIEEGSL-E 837

Query: 563 SIDLLNSMMDR-GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFK 621
            +D L S+M++ G  P+    N  +  L ++ E P+ G  +L++L  + F  + ++    
Sbjct: 838 ELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGA-YLSKLDEKNFSLEAST---- 892

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCR 647
              +++  F   +     + + E CR
Sbjct: 893 -TSMLISLFSREEYQQHAKSLPEKCR 917



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 240/485 (49%), Gaps = 14/485 (2%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK---SFIFIFKAYGKAHLVEEAIR 139
           + T+  LI  Y ++G +   E V+ R++      LE    ++  +     K     EA  
Sbjct: 400 NGTYNCLIHGYLSTGQW---EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARS 456

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLV 198
           LF +M+     ++ +K   ++  +++       AL   + ++N    N I PN   FN V
Sbjct: 457 LFDSMI-----RKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTV 511

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           I    +  ++D  + +F +M  +   P++ TY TL+D LCK  R+D+AVL  ++M  +G 
Sbjct: 512 ICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGV 571

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  V FN L+ GLC   +  +  +L   M  +G  P+ V +NT++  LC +G + +A  
Sbjct: 572 TPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARR 631

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           L+D MV     P+ ++Y T+I+G     R  +  ++L  M       N   Y+TL+ G  
Sbjct: 632 LIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYC 691

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K G+ ++A  L+++M+ KG  P    Y+ +++GL R G+  EA E+   MI +    +  
Sbjct: 692 KAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSIC 751

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TYS ++ GF ++    +A +I++ +   +   + + ++++I GL + G+  +A  ++  +
Sbjct: 752 TYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAI 811

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
            + G  P VV Y  +   L   GS+EE   LF+ M   +  + P+    N L+  L  + 
Sbjct: 812 PANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVM--EKSGTAPNSHMLNALIRKLLDRG 869

Query: 559 NISHS 563
            I  +
Sbjct: 870 EIPRA 874



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 219/486 (45%), Gaps = 97/486 (19%)

Query: 260 PTPVTFNVLINGLCKNG--ELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLC-------- 308
           P   T++++I   C+ G  ELG AA     + LK G   +++  N L+ GLC        
Sbjct: 82  PDCCTYSIVIGCFCRIGRLELGFAAF---GLILKTGWRVDDIVVNQLLKGLCDTKRVGEA 138

Query: 309 -----------------------LKGNLDK-----AVSLLDRMV---ASKCMPNEVTYGT 337
                                  LKG  D+     A  LL  MV    S C P+ V+Y  
Sbjct: 139 MHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNI 198

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +ING    G+ VD A  L    E     +   Y+T+I GL K  + + A  +++QM+EKG
Sbjct: 199 VINGFFNEGQ-VDKAYSLFL--EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG 255

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            KPN V Y+ +IDGLC+  + D AE +  +M++ G   +  TY++++ G  ++    +A 
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE 315

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            +++ M       + V Y+ +I GLC+   + +A  V+ QM+ +G KPD + Y+ +I GL
Sbjct: 316 GVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375

Query: 518 CNAGSVEEALKLFNEML--CLEPKS-------------------------------QPDV 544
           C A SV+ A  +F +M+   ++P +                               +PDV
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
           FTY +LL+ LCK    + +  L +SM+ +G  P +    I L    +K  A  +  D LN
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKK-GALSEMHDLLN 494

Query: 605 ELAI-------RLF--------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
            +         R+F        KR        I   M Q+ LSP   T+  ++  LC+  
Sbjct: 495 LMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLG 554

Query: 650 RIQAAI 655
           R+  A+
Sbjct: 555 RVDDAV 560



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 191/396 (48%), Gaps = 38/396 (9%)

Query: 271 GLCKNGELG--RAAKLVDNMFLKGCLPNEVTYNTLIHGLC---LKGNLDKAVSLLDRMV- 324
           G  ++G LG   A KL D + L     +    N L+  +       +   AVS  +RM+ 
Sbjct: 15  GRARSGNLGLHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLR 74

Query: 325 --ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
             ++K  P+  TY  +I    ++GR   G      + +  + V++ + + L+ GL    +
Sbjct: 75  DCSNKVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKR 134

Query: 383 AEDAMK-LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI---NNGCAANAF 438
             +AM  L +QM E GC+   V Y+ L+ GLC   + +EA E+L  M+   ++ C+ +  
Sbjct: 135 VGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVV 194

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           +Y+ ++ GFF  G+  KA  ++ +M  +  V   V Y+ +I GLC+  ++  A  V+ QM
Sbjct: 195 SYNIVINGFFNEGQVDKAYSLFLEMGVSPDV---VTYNTIIDGLCKAQEVDRAEDVFQQM 251

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           + +G KP+ V Y+++I GLC A  V+ A  +F +M  ++   +P   TYN +++ LCK  
Sbjct: 252 VEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKM--VDKGVKPSNVTYNTIIDGLCKAQ 309

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            +  +  +   M+DRG  PD VT N  +           DG          L K Q    
Sbjct: 310 AVDRAEGVFQQMIDRGVKPDHVTYNTII-----------DG----------LCKAQAIDK 348

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              + + M+ K + P   T+  ++  LC+ + +  A
Sbjct: 349 AEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRA 384


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 126/402 (31%), Positives = 221/402 (54%), Gaps = 2/402 (0%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V+      +P+ +T+N +I+ +C+  +   A+   R M  + C PD +TY T++DG CK
Sbjct: 246 LVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCK 305

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            + + EA  LL +    G  P  VT+  LINGLC  G++ RA +L +    KG  P+ V 
Sbjct: 306 ISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVV 365

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN+L+ GLCL+G +  A+ +++ M    C P+  TY  +INGL K+G   D   V+    
Sbjct: 366 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 425

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            + +  + + ++TLI G  K  K + A++L ++M E G  P+T+ Y+++++GLC+ GK +
Sbjct: 426 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 485

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           E  E   EMI  GC  N  TY+ L++ F  S K  +A ++   M++     + V ++ LI
Sbjct: 486 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 545

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +G C +G L  A +++ ++  +G       ++++I       ++  A K+F+EM  L   
Sbjct: 546 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEM--LSKG 603

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            + D +TY +L++  CK +N+  +   L  M+ +G  P + T
Sbjct: 604 HRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMST 645



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/571 (27%), Positives = 273/571 (47%), Gaps = 33/571 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMR-REKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
            + +LI+  A++G   +++  +   R R     +   ++   +AY +A  + +A+  F  
Sbjct: 19  AYCALIRPLASAGRVDAVDAAVASARSRLSPATIHPLYVASIRAYARAGRLRDAVDAFER 78

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D F C     ++N++++ ++    + +A + Y  ++ A    + P+  T  + +++ C
Sbjct: 79  M-DLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAA---GVSPDLHTHTIRLRSFC 134

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
                  A++L R +P R        YCT++ GL       +A  L D+M     FP   
Sbjct: 135 LTARPHIALRLLRALPHRGA----VAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLA 190

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            FN +++ LCK G++  A  L+  +  +G   N  TYN  I GLC  G L +AV L+D M
Sbjct: 191 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 250

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            A   +P+ VTY T+I GL K     +    L  M  +    +++ Y+T+I G  K    
Sbjct: 251 RAY-AVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 309

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A +L K  + KG  P+ V Y +LI+GLC  G  + A E+  E    G   +   Y+SL
Sbjct: 310 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 369

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +KG    G    A+++  +MA+  C  +   Y+++I+GLC+ G + +A +V    + +G 
Sbjct: 370 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 429

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PDV  ++++I G C    ++ AL+L   M   E    PD  TYN +LN LCK   ++  
Sbjct: 430 LPDVFTFNTLIDGYCKRLKLDSALQLVERM--WEYGIAPDTITYNSVLNGLCKAGKVNEV 487

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
            +    M+ +GC P+ +T NI +                  E   R  K +  S   K++
Sbjct: 488 NETFQEMILKGCHPNPITYNILI------------------ENFCRSNKMEEAS---KVI 526

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M Q+ L P   ++  ++   CR   ++ A
Sbjct: 527 VKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 557



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 245/468 (52%), Gaps = 9/468 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +A  + EA+RL   M    +    V ++N+++  + ++ +   A+ +   ++N      L
Sbjct: 236 EAGRLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN---QGCL 290

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  T+N +I   C++ +V  A +L ++   +   PD  TYC+L++GLC E  ++ A+ L
Sbjct: 291 PDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALEL 350

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            +E Q  G  P  V +N L+ GLC  G +  A ++++ M  +GC P+  TYN +I+GLC 
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 410

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            GN+  A  +++  +    +P+  T+ T+I+G  K  +     +++  M E     +   
Sbjct: 411 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 470

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+++++GL K GK  +  + +++M+ KGC PN + Y+ LI+  CR  K +EA +++ +M 
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 530

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +A ++++L+ GF  +G    A  +++ + +         ++ LI        + 
Sbjct: 531 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMH 590

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  ++ +MLS+G + D   Y  +I G C   +V+ A     EM  ++    P + T+  
Sbjct: 591 MAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEM--IKKGFIPSMSTFGR 648

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
           ++N+L     +  ++ +++ M+  G  P++V  +  L A K+++ AP+
Sbjct: 649 VINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNADKKEIAAPK 694


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 149/569 (26%), Positives = 272/569 (47%), Gaps = 39/569 (6%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           + ++  A +GD   +++ L  MR       E + +    A+ +A   + A++ F+  V +
Sbjct: 60  AAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHD 119

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHR--ALEFYNHIVNAKHM-------NILPNTLTFNLV 198
             C R  ++  + L    +     R  AL   N +  A+ M          P+ +T+  +
Sbjct: 120 LGCARPHRA--AALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATI 177

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           +  +C+L  +D A ++   MP     P   +Y  ++  LC+E R+ E   ++ +M   G 
Sbjct: 178 VSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGL 232

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  +T+  +++  CK GEL  A  ++  M + GC PN VT+  L+ GL   G +  A+ 
Sbjct: 233 QPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALD 292

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +   MVA    P+ V+Y  +I GL  +G     + +L SME+     N   YSTLI G  
Sbjct: 293 MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFS 352

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K G    A+ +W  M   GCKPN VVY+ ++D  C+    ++A+ ++ +M+   C  N  
Sbjct: 353 KAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTV 412

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T+++L++   +  +  +A+ ++ +M ++ CV N   Y+ LIHGL  +G   +A  + T+M
Sbjct: 413 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM 472

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
            S G +  +V Y++++ GLC      EA+    +M+      QP+ FT++ +++A CK+ 
Sbjct: 473 QSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIV--QGIQPNAFTFSAIIHAYCKEG 530

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            +  +  +L +M    C  +++   I +  L  +        D L +    L K      
Sbjct: 531 EVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQ--------DKLVDAMTYLLK------ 576

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                  ML + + P T TW  +V+ + R
Sbjct: 577 -------MLYEGIYPNTVTWNVLVRGVFR 598



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 196/445 (44%), Gaps = 34/445 (7%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK-LVDNMFLKGCL- 294
           L     +D   L L EM++ G   T       +    + G   RA K     +   GC  
Sbjct: 65  LAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLGCAR 124

Query: 295 ---------PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
                    P+          LC    +  A  +LD M    C P++VTY TI++ L KL
Sbjct: 125 PHRAAALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKL 184

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
            R  +   VL +M           Y+ ++  L +E + ++   +   M+ +G +PN + Y
Sbjct: 185 DRLDEATEVLAAMPPVAAS-----YNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITY 239

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + ++D  C+ G+   A  IL  M+  GC  N  T+++L++G F+ G+ H A+++W+ M  
Sbjct: 240 TTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVA 299

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                + V Y++LI GLC  G L+ A  +   M   GC P+V  YS++I G   AG +  
Sbjct: 300 EGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGG 359

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A+ ++N+M       +P+V  Y  +++  CK+   + +  L++ M+   C P+ VT N  
Sbjct: 360 AISIWNDMS--RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 417

Query: 586 LTALKE---------------KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
           + +L +               +     +G  + NEL   LF+         +V  M    
Sbjct: 418 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTY-NELIHGLFREGNCGDALHMVTEMQSHG 476

Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
           +     T+  VV  LC+ +  + A+
Sbjct: 477 IELSLVTYNTVVSGLCQTRMSREAM 501



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 92/191 (48%), Gaps = 4/191 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI+   +         V + MRR   V   +++  +     +     +A+ +  T 
Sbjct: 413 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMV-TE 471

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +     + ++ ++N+V++ + Q  +   A+ F   ++      I PN  TF+ +I   C+
Sbjct: 472 MQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIV---QGIQPNAFTFSAIIHAYCK 528

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A  +   M V NC  +I  Y  LM  LC +++L +A+  L +M  +G +P  VT
Sbjct: 529 EGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVT 588

Query: 265 FNVLINGLCKN 275
           +NVL+ G+ +N
Sbjct: 589 WNVLVRGVFRN 599



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 20/199 (10%)

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF---- 530
           +   +  L   G +   ++   +M  RG      A  + +     AG+ + ALK F    
Sbjct: 58  HEAAVRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAV 117

Query: 531 NEMLCLEPK-----SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           +++ C  P        P          ALC+ + +  +  +L+ M  +GC PD VT    
Sbjct: 118 HDLGCARPHRAAALQPPHRRAAAGRTWALCQNNRVGAARKMLDEMARKGCPPDDVTYATI 177

Query: 586 LTALKEKLEAPQDGTDFL----------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
           ++ L  KL+   + T+ L          N + + L +  R    F +V  M+ + L P  
Sbjct: 178 VSVLC-KLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNV 236

Query: 636 STWERVVQELCRPKRIQAA 654
            T+  +V   C+   ++ A
Sbjct: 237 ITYTTIVDAFCKAGELRMA 255


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 155/527 (29%), Positives = 254/527 (48%), Gaps = 25/527 (4%)

Query: 131 AHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
           A   +EA+ +    + E  C     S+N+V+  +  +     AL+    +   +     P
Sbjct: 172 AKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAK-EGGRCSP 230

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + ++FN VI    + G V  A  LF EM  +   PD+ TY +++D LCK   +D+A  +L
Sbjct: 231 DVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVL 290

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M   G  P  VT+N +I+G   +G    +AK+   M  KG +P+ VT+++ +  LC  
Sbjct: 291 RQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKH 350

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G    A  +   M     MP+ V+Y  +++G    GR  D   +  SM ++    N +  
Sbjct: 351 GRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCI 410

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LIS   K G  ++AM ++ +M  +G +PN V YS LI   CR+G+  +A E   +MI+
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMIS 470

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVE-IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            G   N   Y SL+ GF   G   KA E I + M+K     N V +S +IH LC +G++ 
Sbjct: 471 IGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVM 530

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A+ V+  ++  G +P +V ++S+I G C  G +E+A  + + M+ +    +PDV T N 
Sbjct: 531 DAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSV--GIEPDVVTNNT 588

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L++  CK   I   + L   M+ +   P  VT NI L           DG          
Sbjct: 589 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVL-----------DG---------- 627

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           L +  RTS   K+   M+    +    T++ +++ LCR      AI 
Sbjct: 628 LLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAIT 674



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 231/453 (50%), Gaps = 11/453 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRV---VLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ ++I  Y+ SG +K    +  +M  +  +   V   SF+     +G++   EE   +F
Sbjct: 304 TYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEE---IF 360

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  + H    V S++ +L+    EG +      ++ + +     I+ N    N++I  
Sbjct: 361 QYMTTKGHMPDIV-SYSILLHGYATEGRFADMNNLFHSMADK---GIVSNCHCINILISA 416

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G++D A+ +F EM  +   P++ TY TL+   C+  RL +A+    +M   G  P 
Sbjct: 417 HAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPN 476

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-LPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              ++ LI+G C +G+L +A + +  M  KG   PN V ++++IH LC++G +  A  + 
Sbjct: 477 TAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVF 536

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + ++     P  VT+ ++I+G   +G+      VL +M       +    +TL+SG  K 
Sbjct: 537 NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKS 596

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK +D + L+++M+ K  KP TV Y+ ++DGL R G+   A+++  EMI++G A +  TY
Sbjct: 597 GKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTY 656

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
             L+KG   +    +A+ ++  +   +C ++    + +I+ L +  +  EA  ++  + +
Sbjct: 657 KILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIST 716

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            G  P+V  Y  MI  L   GSVEEA  +F+ M
Sbjct: 717 SGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSM 749



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 248/519 (47%), Gaps = 7/519 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           +F ++I  +   G+      +   M ++  V    ++  I  A  KA  +++A  +   M
Sbjct: 234 SFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQM 293

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           VD+      V ++N++++     G +  + + +  + +     ++P+T+TF+  + ++C+
Sbjct: 294 VDKGVEPDGV-TYNAIIHGYSCSGHWKESAKMFRKMTSK---GLIPDTVTFSSFMSSLCK 349

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G   +A ++F+ M  +   PDI +Y  L+ G   E R  +   L   M   G       
Sbjct: 350 HGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHC 409

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            N+LI+   K G +  A  +   M  +G  PN VTY+TLI   C  G L  A+    +M+
Sbjct: 410 INILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMI 469

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH-VNEYIYSTLISGLFKEGKA 383
           +    PN   Y ++I+G    G  V     +  M  +  H  N   +S++I  L  EG+ 
Sbjct: 470 SIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRV 529

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            DA  ++  ++  G +P  V +++LIDG C VGK ++A  +L  M++ G   +  T ++L
Sbjct: 530 MDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTL 589

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G+ +SGK    + ++++M         V Y++++ GL   G+   A+ ++ +M+  G 
Sbjct: 590 VSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGT 649

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             D+  Y  ++ GLC     +EA+ LF+++  ++ K   D+   N ++NAL K      +
Sbjct: 650 AVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKF--DITILNTMINALYKVRRREEA 707

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
            DL  ++   G  P++ T  + +  L ++    +  T F
Sbjct: 708 NDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMF 746



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 207/448 (46%), Gaps = 15/448 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF S +      G  K  E +   M  +  +    S+  +   Y       +   LFH+M
Sbjct: 339 TFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSM 398

Query: 145 VDE-----FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            D+      HC       N +++   + G+   A+  +  +   +   + PN +T++ +I
Sbjct: 399 ADKGIVSNCHC------INILISAHAKRGMMDEAMLVFTEM---QGQGVRPNVVTYSTLI 449

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
              CR+G + +A++ F +M     EP+   Y +L+ G C    L +A   + EM   G  
Sbjct: 450 SAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLH 509

Query: 260 -PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  V F+ +I+ LC  G +  A  + + +   G  P  VT+N+LI G CL G ++KA  
Sbjct: 510 RPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFG 569

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +LD MV+    P+ VT  T+++G  K G+  DG  +   M  +K       Y+ ++ GL 
Sbjct: 570 VLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLL 629

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           + G+   A K++ +M++ G   +   Y  L+ GLCR    DEA  +  ++    C  +  
Sbjct: 630 RAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDIT 689

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
             ++++   ++  +  +A +++  ++ +  V N   Y V+I  L ++G + EA  +++ M
Sbjct: 690 ILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSM 749

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
              GC P     + +I  L   G + +A
Sbjct: 750 EKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 146/302 (48%), Gaps = 3/302 (0%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F+S+++ +  EG    A + +N ++   H+   P  +TFN +I   C +G ++ A  +  
Sbjct: 516 FSSIIHSLCIEGRVMDAQDVFNLVI---HIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLD 572

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M     EPD+ T  TL+ G CK  ++D+ ++L  EM      PT VT+N++++GL + G
Sbjct: 573 AMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAG 632

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
               A K+   M   G   +  TY  L+ GLC     D+A++L  ++ A  C  +     
Sbjct: 633 RTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILN 692

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+IN L K+ R  +   +  ++       N   Y  +I  L KEG  E+A  ++  M + 
Sbjct: 693 TMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKS 752

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           GC P++ + + +I  L + G   +A   + ++     +  A T S LM  F   GK  + 
Sbjct: 753 GCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQ 812

Query: 457 VE 458
           ++
Sbjct: 813 IK 814



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 123/259 (47%), Gaps = 27/259 (10%)

Query: 400 PNTV-VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
           P TV  Y  L+D  CR  +PD     +  ++  G        ++ +K    + +  +AV+
Sbjct: 121 PLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVD 180

Query: 459 I-WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG--CKPDVVAYSSMIH 515
           +    M++ +CV + + Y+ +I  LC D + +EA  +  +M   G  C PDVV+++++IH
Sbjct: 181 VLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIH 240

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G    G V +A  LFNEM  ++    PDV TYN +++ALCK   +  +  +L  M+D+G 
Sbjct: 241 GFFKQGEVSKACNLFNEM--VQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGV 298

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
           +PD VT N  +          +           ++F++            M  K L P T
Sbjct: 299 EPDGVTYNAIIHGYSCSGHWKESA---------KMFRK------------MTSKGLIPDT 337

Query: 636 STWERVVQELCRPKRIQAA 654
            T+   +  LC+  R + A
Sbjct: 338 VTFSSFMSSLCKHGRSKDA 356



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 108/201 (53%), Gaps = 5/201 (2%)

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN-GCAANAFTYSSLMKGFFES 450
           +++  G K  T+  +  +  LC   + DEA ++L   ++   C  +A +Y++++K     
Sbjct: 149 RLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGD 208

Query: 451 GKGHKAVEIWKDMAK--NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            +  +A+++ + MAK    C  + V ++ +IHG  + G++ +A  ++ +M+ +G  PDV 
Sbjct: 209 SRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVG 268

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+S++  LC A ++++A  +  +M  ++   +PD  TYN +++      +   S  +  
Sbjct: 269 TYNSIVDALCKARAMDKAEFVLRQM--VDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFR 326

Query: 569 SMMDRGCDPDLVTCNIFLTAL 589
            M  +G  PD VT + F+++L
Sbjct: 327 KMTSKGLIPDTVTFSSFMSSL 347


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 135/427 (31%), Positives = 231/427 (54%), Gaps = 5/427 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V ++N V+  + +EG    A   +  +   K   + P+ +T+N +I    ++G++  A+
Sbjct: 250 SVFTYNMVIGCLAREGDLEAARSLFEEM---KAKGLRPDIVTYNSLIDGYGKVGMLTGAV 306

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            +F EM    CEPD+ TY +L++  CK  R+ +A   L  M+  G  P  VT++ LI+  
Sbjct: 307 SVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAF 366

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G L  A K   +M   G  PNE TY +LI   C  G+L++A  L   M  +    N 
Sbjct: 367 CKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNI 426

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY  +++GL + GR  +   +  ++ +  + +N+ IY++L  G  K    E AM + ++
Sbjct: 427 VTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEE 486

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M +K  KP+ ++Y   I GLCR  + +++  ++ EM++ G  AN++ Y++L+  +F+ GK
Sbjct: 487 MNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGK 546

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +AV + ++M         V Y VLI GLC+ G +++A   +  M   G +P+++ Y++
Sbjct: 547 TTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTA 606

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I GLC    +EEA  LFNEM  L+    PD   Y  L++   K  N   ++ L N M++
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEM--LDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVE 664

Query: 573 RGCDPDL 579
            G + DL
Sbjct: 665 IGMELDL 671



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 253/523 (48%), Gaps = 12/523 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I   A  GD ++   +   M+ +       ++  +   YGK  ++  A+ +F  M
Sbjct: 253 TYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM 312

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   C+  V ++NS++N   +   + R  + + ++   K   + PN +T++ +I   C+
Sbjct: 313 KDA-GCEPDVITYNSLINCFCK---FERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCK 368

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G++  A + F +M     +P+ +TY +L+D  CK   L+EA  L  EMQ  G     VT
Sbjct: 369 AGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVT 428

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L++GLC++G +  A +L   +   G   N+  Y +L HG      ++KA+ +L+ M 
Sbjct: 429 YTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMN 488

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ + YGT I GL +     D   V+  M +     N YIY+TLI   FK GK  
Sbjct: 489 KKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTT 548

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ L ++M + G K   V Y  LIDGLC++G   +A      M  NG   N   Y++L+
Sbjct: 549 EAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALI 608

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++    +A  ++ +M       +++ Y+ LI G  + G   EA  +  +M+  G +
Sbjct: 609 DGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGME 668

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D+ AY+S+I G    G V+ A  L +EM  L     PD      LL    +  +I+ ++
Sbjct: 669 LDLCAYTSLIWGFSRYGQVQLAKSLLDEM--LRKGIIPDQVLCICLLRKYYELGDINEAL 726

Query: 565 DLLNSMMDRG-----CDPDLVTCNIFLTALKEKLEAPQDGTDF 602
            L + M  RG      D  + +C   +T L  KL A Q GTDF
Sbjct: 727 ALHDDMARRGLISGTIDITVPSCLTAVTKL-HKLCASQSGTDF 768



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 218/464 (46%), Gaps = 40/464 (8%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C+     F+++ NV++  G+   A + +  +       +LP   + N ++  + +     
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKM---NKFRVLPKVRSCNELLHRLSKSSKGG 233

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
            A+  F++M V    P ++TY  ++  L +E  L+ A  L +EM+  G  P  VT+N LI
Sbjct: 234 LALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLI 293

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           +G  K G L  A  + + M   GC P+ +TYN+LI+  C    + +A   L  M      
Sbjct: 294 DGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQ 353

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PN VTY T+I+   K G  ++  +  + M       NE+ Y++LI    K G   +A KL
Sbjct: 354 PNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKL 413

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
             +M + G   N V Y+AL+DGLC  G+  EAEE+   ++  G   N   Y+SL  G+ +
Sbjct: 414 ESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIK 473

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC-----ED------------------- 485
           +    KA++I ++M K N   + + Y   I GLC     ED                   
Sbjct: 474 AKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYI 533

Query: 486 -----------GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
                      GK  EA  +  +M   G K  VV Y  +I GLC  G V++A++ F+ M 
Sbjct: 534 YTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHM- 592

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
                 QP++  Y  L++ LCK   +  + +L N M+D+G  PD
Sbjct: 593 -TRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPD 635



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 95/251 (37%), Gaps = 60/251 (23%)

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           C+P   V+  L + L  +G  +EA +  ++M          + + L+    +S KG  A+
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
             +KDM                                   +  G  P V  Y+ +I  L
Sbjct: 237 SFFKDM-----------------------------------VVAGLSPSVFTYNMVIGCL 261

Query: 518 CNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
              G +E A  LF EM   + K  +PD+ TYN L++   K   ++ ++ +   M D GC+
Sbjct: 262 AREGDLEAARSLFEEM---KAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCE 318

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           PD++T N  +                         K +R    F+ +  M Q+ L P   
Sbjct: 319 PDVITYNSLINC---------------------FCKFERIPQAFEYLHGMKQRGLQPNVV 357

Query: 637 TWERVVQELCR 647
           T+  ++   C+
Sbjct: 358 TYSTLIDAFCK 368


>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Glycine max]
          Length = 479

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/415 (33%), Positives = 227/415 (54%), Gaps = 12/415 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  +I        F+  E +L RM++EK +V E  F+ I + YG+ H   +AIR+FH M
Sbjct: 52  TFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKM 111

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            + F  + T K++ ++L+++++E    RA+ FY  +   + + I  + ++ N++IK +C+
Sbjct: 112 -EGFQLRPTQKAYLTILDILVEENHVKRAIGFYREM---RELGIPSSVVSLNILIKALCK 167

Query: 205 -LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
               VD+A+++F+EMP R C+PD YTY TL++GLC+   + EA  L  EM+  G   + V
Sbjct: 168 NKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVV 227

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  LI+GLC++  L  A  L++ M      PN  TY++L+ GLC  G+  +A+ LL+ M
Sbjct: 228 TYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVM 287

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                +PN VTY T+INGL K  +  +   +L  M  +    N  +Y  +ISGL   G  
Sbjct: 288 DKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSY 347

Query: 384 EDAMKLWKQMMEKGCKPNTVVYS-------ALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           ++A     +M+  G  PN   +S        ++ GLC    P  A ++   M     +  
Sbjct: 348 QEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVE 407

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
             T+  L+K F + G  HKA  I ++M  + C+ +E  ++V+I GL +  K+REA
Sbjct: 408 IDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREA 462



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 206/461 (44%), Gaps = 44/461 (9%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR---NCEPDIYTYCTLMDGLCKENRLDEA 246
           P  +T +LV++ +     V  A+ +F             D  T+  ++  L   N+   A
Sbjct: 10  PKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPA 69

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             +L+ M+ + C  T   F  +  G  +      A ++   M      P +  Y T++  
Sbjct: 70  EGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDI 129

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFHV 365
           L  + ++ +A+     M       + V+   +I  L K    VD A R+   M  R    
Sbjct: 130 LVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQP 189

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + Y Y TLI+GL + G   +A +L+K+M +KG   + V Y++LI GLC+    DEA  +L
Sbjct: 190 DSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLL 249

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM  N    N FTYSSLM G  + G   +A+++ + M K + + N V YS LI+GLC++
Sbjct: 250 EEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKE 309

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------ 533
            KLREA  +  +M  +G KP+   Y  +I GLC AGS +EA    +EM            
Sbjct: 310 RKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASW 369

Query: 534 -------------LC--LEPKSQPDVF-------------TYNILLNALCKQSNISHSID 565
                        LC  ++P     ++             T++ L+   CK+ ++  +  
Sbjct: 370 SLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAAR 429

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           +L  M+  GC PD    N+ +  L ++ +  +     L EL
Sbjct: 430 ILEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQLLVEL 470



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 190/400 (47%), Gaps = 36/400 (9%)

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNM---FLKGCLPNEVTYNTLIHGLCLKGNLDK 315
           +P  +T ++++  +    ++ +A  + D+    +  G   +  T+  +I  L        
Sbjct: 9   WPKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRP 68

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +L+RM   KCM  E  + +I  G  ++ R +D  RV   ME  +    +  Y T++ 
Sbjct: 69  AEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILD 128

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP-DEAEEILFEMINNGCA 434
            L +E   + A+  +++M E G   + V  + LI  LC+  +  D A  I  EM N GC 
Sbjct: 129 ILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQ 188

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +++TY +L+ G    G   +A E++K+M +     + V Y+ LIHGLC+   L EA  +
Sbjct: 189 PDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGL 248

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNA 553
             +M     +P+V  YSS++ GLC  G   +A++L   M   + K   P++ TY+ L+N 
Sbjct: 249 LEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVM---DKKHHLPNMVTYSTLING 305

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
           LCK+  +  ++++L+ M  +G  P+       ++ L     + Q+  +F++E+ +     
Sbjct: 306 LCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAA-GSYQEAANFIDEMVL----- 359

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWE-------RVVQELC 646
               GG           +SP  ++W         VVQ LC
Sbjct: 360 ----GG-----------ISPNRASWSLHVRMHNMVVQGLC 384



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 123/272 (45%), Gaps = 46/272 (16%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EA  LF  M ++     +V ++ S+++ + Q      A+     +   K  +I PN  
Sbjct: 207 ISEAKELFKEM-EQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLEEM---KRNDIEPNVF 262

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T++ ++  +C+ G    A+QL   M  ++  P++ TY TL++GLCKE +L EAV +LD M
Sbjct: 263 TYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRM 322

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY-------NTLIHG 306
           ++ G  P    +  +I+GLC  G    AA  +D M L G  PN  ++       N ++ G
Sbjct: 323 RIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQG 382

Query: 307 LC-----------------------------------LKGNLDKAVSLLDRMVASKCMPN 331
           LC                                    +G+L KA  +L+ MV   C+P+
Sbjct: 383 LCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPD 442

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           E  +  +I GL    +  +    L+   ++KF
Sbjct: 443 EGVWNVVIGGLWDRKKVREATEQLLVELQQKF 474



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/276 (23%), Positives = 118/276 (42%), Gaps = 21/276 (7%)

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G + +   +  +I  L  V +   AE +L  M    C      + S+ +G+    +   A
Sbjct: 45  GFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDA 104

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + ++  M        +  Y  ++  L E+  ++ A   + +M   G    VV+ + +I  
Sbjct: 105 IRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKA 164

Query: 517 LC-NAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           LC N  +V+ AL++F EM    P    QPD +TY  L+N LC+  NIS + +L   M  +
Sbjct: 165 LCKNKETVDSALRIFQEM----PNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQK 220

Query: 574 GCDPDLVTCNIFLTAL--------------KEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           G    +VT    +  L              + K    +      + L   L K   +S  
Sbjct: 221 GFSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQA 280

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +++EVM +K   P   T+  ++  LC+ ++++ A+
Sbjct: 281 MQLLEVMDKKHHLPNMVTYSTLINGLCKERKLREAV 316


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 142/456 (31%), Positives = 228/456 (50%), Gaps = 43/456 (9%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++LN   ++G+   A      +   K   I P   T+N ++    RLG +  A ++ 
Sbjct: 245 TYNTLLNAHCRKGMLGEARAL---LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ---------------VDGCF- 259
             M     EPD+ TY  L  GLC+  ++DEA  L DEM+               VD CF 
Sbjct: 302 ESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFK 361

Query: 260 --------------------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
                               PT VT N+++  LCK G+L  A   ++ +  +G  P+ +T
Sbjct: 362 WRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVIT 421

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTLI   C  GN+ KA +L+D MV      +  T  T++  L K+ R  D   +L S  
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R F  +E  Y T+++  FKE   E A++LW QM+E+   P+   Y+ LI GLCR+ +  
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA + L E +  G   +  TY+ ++  + + G    A      M +N+   + V  + L+
Sbjct: 542 EAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +GLC  GKL +A  ++   + +G K DV+ Y+++I  +C  G V+ AL  F++M   E K
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDM---EVK 658

Query: 540 S-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
             QPD FTYN++L+AL +      + ++L+ + D G
Sbjct: 659 GLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSG 694



 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 147/537 (27%), Positives = 266/537 (49%), Gaps = 33/537 (6%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG--LYHRALEFYNHIVN 182
             AY +  L   A +L H++      + ++++ N+VL+ + +    L   +L+ +  ++ 
Sbjct: 142 LSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIE 201

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
              + + PN  TFNL++ T C  G + +A+     M      PD  TY TL++  C++  
Sbjct: 202 ---LRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGM 258

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L EA  LL  M+ DG  PT  T+N L++   + G + +A K+V++M   G  P+  TYN 
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318

Query: 303 LIHGLCLKGNLDKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           L  GLC  G +D+A  L D M      +P+ VTY T+++   K   + D  R+L  M ++
Sbjct: 319 LAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
                   ++ ++  L KEGK E+A+   +++ E+G  P+ + Y+ LID  C+ G   +A
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKA 438

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             ++ EM+  G   + FT ++++    +  +   A E+     +   V +EV Y  ++  
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAA 498

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
             ++     A  +W QM+ R   P +  Y+++I GLC    ++EA+   NE   +E    
Sbjct: 499 YFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEF--VEKGLV 556

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDG 599
           PD  TYNI+++A CK+ ++ ++    N M++    PD+VTCN  +    L  KL+     
Sbjct: 557 PDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDK---- 612

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                  A++LF+     G  K V+V+          T+  ++Q +C+   +  A++
Sbjct: 613 -------ALKLFESWVEKG--KKVDVI----------TYNTLIQSMCKVGDVDTALH 650



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 175/364 (48%), Gaps = 24/364 (6%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN  T+N L+H  C KG L  A++ L  M      P+ VTY T++N   + G   +   +
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M+       +  Y+TL+S   + G  + A K+ + M   G +P+   Y+ L  GLC+
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQ 325

Query: 415 VGKPDEAEEILFEMINNGCA-ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
            GK DEA  +  EM   G A  +  TY++L+   F+      A+ + ++M         V
Sbjct: 326 AGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            +++++  LC++GKL EA     ++   G  PDV+ Y+++I   C AG+V +A  L +EM
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
           +    K   D FT N +L  LCK      + +LL+S   RG  PD V+    + A     
Sbjct: 446 VGKGLKM--DTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAY---- 499

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                            FK        ++ + M+++ L P  ST+  +++ LCR +R++ 
Sbjct: 500 -----------------FKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKE 542

Query: 654 AINK 657
           AI+K
Sbjct: 543 AIDK 546


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 134/407 (32%), Positives = 212/407 (52%), Gaps = 3/407 (0%)

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR-NCEPDIYTYCTLMDGLCK 239
           V  +   + P+T T+N ++  +CR GL+  A  LF +MP R     D Y+Y  L+ GLC 
Sbjct: 114 VRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCA 173

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R+D+A  +  +M    C P   T+ VL++GLCK   +G A  L+  M  KG +PN VT
Sbjct: 174 AGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVT 233

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN LI GLC +G  D    LL++M   +  P+  TY  +++GL K G+   GA+VL    
Sbjct: 234 YNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAI 293

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +   +    Y+ LI+G  K G  + A+ + + M      P    ++ +I G C  GK  
Sbjct: 294 GKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVH 353

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A   L +M   G + N  T++SL+ G    G+   A+ +   M +   + +   Y++ I
Sbjct: 354 KAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFI 413

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
             LC++G+L EA  +++ +  +G K   V Y+S++HG C  G ++ A  L  +M      
Sbjct: 414 DALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKM--ASEN 471

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             PDV TYN L++ LCK   +  +IDLL+ M  +G +P   T NI +
Sbjct: 472 CMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILI 518



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/533 (27%), Positives = 254/533 (47%), Gaps = 11/533 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  + K    A  +++A R+F  M   + C+  V ++  +L+ + +      A      
Sbjct: 163 SYTILIKGLCAAGRIDDACRVFAKMSRGW-CRPGVHTYTVLLDGLCKVRRVGEAEALLGE 221

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +VN     ++PN +T+N +I  +C+ G  D+  +L  +M ++   PD +TY  ++ GLCK
Sbjct: 222 MVNK---GVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCK 278

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             ++     +L E    G     +T+N LING CK G++  A  ++  M      P   T
Sbjct: 279 HGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQT 338

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +N +IHG C  G + KA++ L +M  +   PN VT+ ++I+G   +G      R+L  ME
Sbjct: 339 FNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLME 398

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E     +   Y+  I  L  EG+ E+A  L+  +  KG K + V+Y++L+ G C+VG  D
Sbjct: 399 EYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDID 458

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A  ++ +M +  C  +  TY++L+ G  +  +  +A+++   M K         +++LI
Sbjct: 459 SAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILI 518

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
             +  D K  +A  ++ QM+S GCKPD   Y+  I      G+ +E       +   E  
Sbjct: 519 KQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAG 578

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             PDV TYN ++ A         +      M+    DPD  T +I L  +  K     D 
Sbjct: 579 VFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNK----DDS 634

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
             F NE   +++K        ++ E M +   +P  ST++ +++ LC   R++
Sbjct: 635 DAFDNE---KIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLE 684



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 205/443 (46%), Gaps = 24/443 (5%)

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           F  M      P+  TY TL++  CK   L +A   L  M+  G  P   T+N L+ GLC+
Sbjct: 78  FGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCR 137

Query: 275 NGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
            G L  A  L   M  + G   +  +Y  LI GLC  G +D A  +  +M    C P   
Sbjct: 138 AGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVH 197

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +++GL K+ R  +   +L  M  +    N   Y+ LI GL +EG+ +D  KL ++M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             +   P+   Y+ ++ GLC+ GK     ++L E I  G A    TY++L+ G+ + G  
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A+++ + M +N        ++ +IHG C  GK+ +A    TQM   G  P+ V ++S+
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I G C+ G  + AL+L + M   E    PD  TY I ++ALC +  +  +  L + +  +
Sbjct: 378 ISGQCSVGERKIALRLLDLM--EEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMK 435

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           G    +   N+  T+L        D                     F ++E M  +   P
Sbjct: 436 G----IKAHNVIYTSLVHGYCQVGD-----------------IDSAFGLMEKMASENCMP 474

Query: 634 QTSTWERVVQELCRPKRIQAAIN 656
              T+  ++  LC+ KR+  AI+
Sbjct: 475 DVHTYNTLIDGLCKVKRLDRAID 497



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 134/561 (23%), Positives = 240/561 (42%), Gaps = 55/561 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI      G F  +  +L +M  ++      ++  +     K   V    ++ H  
Sbjct: 233 TYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEA 292

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +      V ++N+++N   + G    AL+    +   K   + P   TFN VI   C 
Sbjct: 293 IGK-GVALEVLTYNALINGYCKGGDMKAALDVLQLM---KRNRVNPGVQTFNEVIHGFCC 348

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A+    +M      P+  T+ +L+ G C       A+ LLD M+  G  P   T
Sbjct: 349 GGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQT 408

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + + I+ LC  G+L  A  L   + +KG   + V Y +L+HG C  G++D A  L+++M 
Sbjct: 409 YAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMA 468

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  CMP+  TY T+I+GL K+ R      +L  M+++        ++ LI  +  + K  
Sbjct: 469 SENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHA 528

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALI--DGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           DA K+++QM+  GCKP+   Y+  I  D      K +  +  + EM   G   +  TY++
Sbjct: 529 DAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNA 588

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC--EDGKLREARMVWT---- 496
           ++K + ++G   KA      M       +   YS+L++ +C  +D    +   +W     
Sbjct: 589 IIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDV 648

Query: 497 --------QMLSRGCKPDVVAYSSMIHGLCNAGSVEEA---------------------- 526
                   QM      P +  Y +++ GLCN   +EE                       
Sbjct: 649 RNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYL 708

Query: 527 ------LKLFNEMLCLEPKS------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
                 L+++ E  C + +S      QP + +  +LL+ LC   +   ++ + + M+  G
Sbjct: 709 LGCYCNLEMYREA-CEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLG 767

Query: 575 CDPDLVTCNIFLTALKEKLEA 595
            + D V   + +  L EK  A
Sbjct: 768 YNYDEVVWKLLIDCLHEKGHA 788



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 122/473 (25%), Positives = 209/473 (44%), Gaps = 56/473 (11%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V++FN V++     G  H+A+ F   +  A    + PNT+TFN +I   C +G    A++
Sbjct: 336 VQTFNEVIHGFCCGGKVHKAMAFLTQMAGA---GLSPNTVTFNSLISGQCSVGERKIALR 392

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L   M      PD  TY   +D LC E +L+EA  L   + + G     V +  L++G C
Sbjct: 393 LLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYC 452

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           + G++  A  L++ M  + C+P+  TYNTLI GLC    LD+A+ LLD+M      P   
Sbjct: 453 QVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTC 512

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG--KAEDAMKLWK 391
           T+  +I  ++   +  D A++   M       ++  Y+  IS  + EG  K E+      
Sbjct: 513 TFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV 572

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM------- 444
           +M E G  P+   Y+A+I      G  ++A     +M++     +  TYS L+       
Sbjct: 573 EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKD 632

Query: 445 -KGFFESGKGHKAV------EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
               F++ K  K V      E+++ M +++       Y  L+ GLC   +L E   +  +
Sbjct: 633 DSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLK 692

Query: 498 MLSR-------------GCKPDVVAYS-------SMIH---------------GLCNAGS 522
           M                GC  ++  Y        SM H               GLC++G 
Sbjct: 693 MQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGD 752

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
              A+ +F++ML L      D   + +L++ L ++ +    +++L+ M  + C
Sbjct: 753 HGMAVSIFSDMLGL--GYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKC 803



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 206/519 (39%), Gaps = 96/519 (18%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y   GD K+   VL  M+R +     ++F  +   +     V +A+     M
Sbjct: 303 TYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQM 362

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC- 203
                   TV +FNS+++     G    AL   + +   +   +LP+  T+ + I  +C 
Sbjct: 363 AGAGLSPNTV-TFNSLISGQCSVGERKIALRLLDLM---EEYGVLPDRQTYAIFIDALCD 418

Query: 204 ----------------------------------RLGLVDNAIQLFREMPVRNCEPDIYT 229
                                             ++G +D+A  L  +M   NC PD++T
Sbjct: 419 EGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHT 478

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y TL+DGLCK  RLD A+ LLD+M+  G  PT  TFN+LI  +  + +   AAK+ + M 
Sbjct: 479 YNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMI 538

Query: 290 LKGCLPNEVTYNTLI-----HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
             GC P++ TY   I      G   + N+D AV     M  +   P+  TY  II   V 
Sbjct: 539 SSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV---EMHEAGVFPDVETYNAIIKAYVD 595

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE--DAMKLWK----------- 391
            G         + M       +   YS L++ +  +  ++  D  K+WK           
Sbjct: 596 AGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELF 655

Query: 392 -QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN-------------GCAANA 437
            QM E    P    Y AL+ GLC   + +E E +L +M  N             GC  N 
Sbjct: 656 EQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNL 715

Query: 438 FTYSS----------------------LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
             Y                        L+ G  +SG    AV I+ DM      Y+EV +
Sbjct: 716 EMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVW 775

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            +LI  L E G       + + M ++ C      Y+S++
Sbjct: 776 KLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/383 (22%), Positives = 156/383 (40%), Gaps = 26/383 (6%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +   Y +   ++ A  L   M  E +C   V ++N++++ + +     RA++  + +
Sbjct: 444 YTSLVHGYCQVGDIDSAFGLMEKMASE-NCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKM 502

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC-----TLMD 235
              K   I P T TFN++IK +       +A +++ +M    C+PD  TY         +
Sbjct: 503 ---KKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFE 559

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           G  KE  +D AV+   EM   G FP   T+N +I      G   +A      M      P
Sbjct: 560 GATKEENIDMAVV---EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDP 616

Query: 296 NEVTYNTLIHGLCLKGNLD--------KAVS------LLDRMVASKCMPNEVTYGTIING 341
           +  TY+ L++ +C K + D        K V       L ++M  S   P   TY  ++ G
Sbjct: 617 DCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRG 676

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L    R  +   +L+ M+     ++E +   L+          +A + ++ M  +  +P 
Sbjct: 677 LCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPG 736

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
                 L+ GLC  G    A  I  +M+  G   +   +  L+    E G     +E+  
Sbjct: 737 LKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLS 796

Query: 462 DMAKNNCVYNEVCYSVLIHGLCE 484
            M    CV +   Y+ L+  + E
Sbjct: 797 VMDAKKCVASTRTYASLVRLVAE 819



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 52/241 (21%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC---------- 203
           V+++N+++   +  GL  +A  F+ H V    + I P+  T+++++  +C          
Sbjct: 583 VETYNAIIKAYVDAGLKEKA--FFAH-VKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDN 639

Query: 204 ----RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD--- 256
               ++  V N  +LF +M   +  P I TY  L+ GLC + RL+E   LL +MQ +   
Sbjct: 640 EKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSIL 699

Query: 257 ----------GCF----------------------PTPVTFNVLINGLCKNGELGRAAKL 284
                     GC+                      P   +  +L++GLC +G+ G A  +
Sbjct: 700 LDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSI 759

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
             +M   G   +EV +  LI  L  KG+    + +L  M A KC+ +  TY +++  + +
Sbjct: 760 FSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVRLVAE 819

Query: 345 L 345
           L
Sbjct: 820 L 820


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  235 bits (600), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 153/501 (30%), Positives = 252/501 (50%), Gaps = 11/501 (2%)

Query: 100 KSLEMVLYRMRREKRV-VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
           K+LE  +YRM  E  +     ++  +  ++ K   V+ A+ L   M  E  C  +  +FN
Sbjct: 220 KALE--VYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKM-QERGCYPSEVTFN 276

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
            ++N + ++G   +A      +  A  + + P   T+N +I   C+ GL+  A+ L+ EM
Sbjct: 277 VLINGLSKKGELQQAKGLIQEMAKAG-LRVSP--YTYNPLICGYCKKGLLVEALALWEEM 333

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             R   P + ++ T+M G CKE ++ +A   L +M      P  +++N LI G C+ G +
Sbjct: 334 VTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNI 393

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
           G A  L+D +  +    N VTYNTLI GLC  G+L+ A+ L + M+     P+ VTY  +
Sbjct: 394 GEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVL 453

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           +NG  KLG  +        M       +++ Y+  I G  K G    A KL ++M+ KG 
Sbjct: 454 VNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGF 513

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ + Y+  ++GLC++G  +EA E+L +MI +G   +  TY+S M    E+G   +  E
Sbjct: 514 PPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGRE 573

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           I+ DM         V Y+VLIH    +G+L  A   + +M  +G  P+V+ Y+ +I+G C
Sbjct: 574 IFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFC 633

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
               +++A K F EM   E    P+ +TY IL+N  C       ++ L   M+ +   PD
Sbjct: 634 KVRKMDQACKFFIEM--QEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPD 691

Query: 579 LVTCNIFLTALKE--KLEAPQ 597
             T    L  L +  K++A Q
Sbjct: 692 SCTHGALLKKLDKDYKVQAVQ 712



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 170/679 (25%), Positives = 308/679 (45%), Gaps = 75/679 (11%)

Query: 38  FFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPK----LGSYQLGDSTFYSLIQHY 93
           F +   +++S+K    E    + +  P+ D IFN+  +      +       F S+I   
Sbjct: 46  FHNYSPSIASSKHTTVESTIQSIAVAPYKDLIFNTIQEKPWAFCNQNWVSDKFNSVIT-- 103

Query: 94  ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE------ 147
               D + L  VLY +R EK  +  + F  +    G          +   +VD       
Sbjct: 104 ----DPQLLIRVLYSIR-EKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSA 158

Query: 148 FHCKRTVKSFN--SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           +     + SF    +++V+I   L ++ L  +  ++  +    LP+    N ++K +   
Sbjct: 159 YWVMERIISFEMYGIVDVLIGGYLNYQCLLVFEKMMRNR---FLPDVKNCNRILKILRDK 215

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
            L+  A++++R M      P + TY T++   CK   +  A+ L+ +MQ  GC+P+ VTF
Sbjct: 216 NLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTF 275

Query: 266 NVLINGLCKNGELGRAAKLV-----------------------------------DNMFL 290
           NVLINGL K GEL +A  L+                                   + M  
Sbjct: 276 NVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVT 335

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G  P   ++NT+++G C +G +  A   L  M+    MP+ ++Y T+I G  +LG   +
Sbjct: 336 RGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGE 395

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +L  +  R    N   Y+TLI GL + G  E A+KL + M+ +G  P+ V Y+ L++
Sbjct: 396 AFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVN 455

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G C++G    A+E   EM++ G A + F Y++ + G  + G   KA ++ ++M       
Sbjct: 456 GACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPP 515

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           + + Y+V ++GLC+ G L EA  +  +M+  G  PD V Y+S +H     G + E  ++F
Sbjct: 516 DVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIF 575

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--- 587
            +M  L     P V TY +L++A      +  ++     M ++G  P+++T N+ +    
Sbjct: 576 YDM--LSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFC 633

Query: 588 -------ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG-----FKIVEVMLQKFLSPQT 635
                  A K  +E  + G  F N+    +   +  + G      ++   ML K + P +
Sbjct: 634 KVRKMDQACKFFIEMQEKGI-FPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDS 692

Query: 636 STWERVVQELCRPKRIQAA 654
            T   ++++L +  ++QA 
Sbjct: 693 CTHGALLKKLDKDYKVQAV 711



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 211/453 (46%), Gaps = 39/453 (8%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + TF  LI   +  G+ +  + ++  M +    V   ++  +   Y K  L+ EA+ L+ 
Sbjct: 272 EVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWE 331

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV       TV S N+++    +EG    A +    + +    N++P+ +++N +I   
Sbjct: 332 EMVTR-GVSPTVASHNTIMYGFCKEGKMSDARQ---QLSDMLKKNLMPDIISYNTLIYGF 387

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CRLG +  A  L  E+  RN   +I TY TL+DGLC+   L+ A+ L ++M   G  P  
Sbjct: 388 CRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDV 447

Query: 263 VTFNVLINGLCKNGEL-----------------------------------GRAAKLVDN 287
           VT+ VL+NG CK G +                                    +A KL + 
Sbjct: 448 VTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEE 507

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  KG  P+ +TYN  ++GLC  GNL++A  LL +M+    +P+ VTY + ++  ++ G 
Sbjct: 508 MLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGH 567

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +G  +   M  R        Y+ LI      G+ + AM  + +M EKG  PN + Y+ 
Sbjct: 568 LREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNV 627

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI+G C+V K D+A +   EM   G   N +TY+ L+      GK  +A+ ++  M    
Sbjct: 628 LINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKR 687

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
              +   +  L+  L +D K++  + + + +L 
Sbjct: 688 IRPDSCTHGALLKKLDKDYKVQAVQFIESLILD 720


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 148/541 (27%), Positives = 259/541 (47%), Gaps = 44/541 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F+    +L R+R    +    SF  I    GK   V+EA+ LF  M
Sbjct: 321 AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 380

Query: 145 VDEFHCKRTVKSFNSVLNVIIQE-GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
                 K+  +  +S  N+II    L  R  E Y  +   +H ++ PN LT N+++  +C
Sbjct: 381 ------KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 434

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +   ++ A ++F     R C PD  TYC+L+DGL K+ ++DEA  L ++M   G    PV
Sbjct: 435 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPV 494

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +  LI     +G      K+   +  +GC P+    NT +  +   G ++K   + + +
Sbjct: 495 VYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 554

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            +   +P+  +Y  +I+GL K G+A + + +  +M+++ F ++   Y+ ++ G  K GK 
Sbjct: 555 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 614

Query: 384 EDAMKLWKQMMEKGCKP-----------------------------------NTVVYSAL 408
             A ++ ++M EK  +P                                   N V+YS+L
Sbjct: 615 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 674

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           IDG  +VG+ DEA  IL EM+  G   N +T++SL+    ++ + ++A+  ++ M +  C
Sbjct: 675 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 734

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N   YS+LI+GLC   K  +A + W  M  +G  P+VV Y++MI GL   G++ +A  
Sbjct: 735 PPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYS 794

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           LF           PD  ++N L+  +   +    +  +      RGC  ++ +C   L A
Sbjct: 795 LFERFKA--NGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDA 852

Query: 589 L 589
           L
Sbjct: 853 L 853



 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 159/580 (27%), Positives = 275/580 (47%), Gaps = 35/580 (6%)

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
           MRR K      ++  +  A  +A   E A+ L   M  E   +  V  F +++  + +EG
Sbjct: 170 MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-QEVGYEVGVHLFTTLVRALAREG 228

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
               AL   + +   K   + P+ + +N+ I    + G VD A + F E+  +  +PD  
Sbjct: 229 QVADALALVDEV---KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDV 285

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           +Y +++  LCK  RL EA  L  +M+ +   P    +N +I G    G    A KL++ +
Sbjct: 286 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 345

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             +GC+P+ V++N+++  L  K  +D+A+SL + M      PN  TY  II+ L   GR 
Sbjct: 346 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRV 404

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +  R+L  ME      N    + ++  L K  K E+A K+++   ++GC P+ V Y +L
Sbjct: 405 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 464

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           IDGL + G+ DEA  +  +M++ G  AN   Y+SL++ FF  G+     +I+K++ +  C
Sbjct: 465 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGC 524

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             +    +  +  + + G++ + RM++  + S G  PDV +YS +IHGL  AG   E   
Sbjct: 525 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 584

Query: 529 LFNEMLCLEPKSQP---DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           +F+ M     K Q    D   YN +++  CK   +  + ++L  M ++   P + T    
Sbjct: 585 IFHAM-----KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAI 639

Query: 586 LTALK--EKL--------EAPQDGTDF----LNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
           +  L   ++L        EA   G +      + L     K  R    + I+E M++K L
Sbjct: 640 VDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGL 699

Query: 632 SPQTSTWERVVQELCRPKRIQAAI--------NKCWSNLY 663
           +P   TW  ++  L + + I  A+         KC  N Y
Sbjct: 700 TPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTY 739



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 202/428 (47%), Gaps = 17/428 (3%)

Query: 170 YHRALEFYNHIVNA-----KHMNIL----PNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           YH  L F +H + A     + M +L    PN    +L    V R   +D+A+     M  
Sbjct: 114 YHAVLPFLHHDLAALEKVLEEMAVLGYGLPNQACAHLAAALV-RARRLDDAVLAVAVMRR 172

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
               P    Y  L+  L +  R + A+ LL +MQ  G       F  L+  L + G++  
Sbjct: 173 LKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVAD 232

Query: 281 AAKLVDNMFLKG-CL-PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
           A  LVD   +KG CL P+ V YN  I      GN+D A      + A    P++V+Y ++
Sbjct: 233 ALALVDE--VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSM 290

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I  L K GR  +   +   ME  +     Y Y+T+I G    G+ EDA KL +++ E+GC
Sbjct: 291 IWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGC 350

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ V +++++  L +  K DEA   LFE++      N+ TY+ ++      G+  +A  
Sbjct: 351 IPSVVSFNSILTCLGKKRKVDEALS-LFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYR 409

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           I  +M   +   N +  ++++  LC+  KL EA  ++     RGC PD V Y S+I GL 
Sbjct: 410 ILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLG 469

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G V+EA +LF +ML     + P V+T  I    +  +    H I     ++ RGC PD
Sbjct: 470 KKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI--FKELIRRGCKPD 527

Query: 579 LVTCNIFL 586
           L   N ++
Sbjct: 528 LTLLNTYM 535



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 103/432 (23%), Positives = 203/432 (46%), Gaps = 39/432 (9%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +EEA ++F +   +  C     ++ S+++ + ++G    A   +  +++A H    
Sbjct: 435 KARKLEEAYKIFES-ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN--- 490

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            N + +  +I+     G  ++  ++F+E+  R C+PD+    T MD + K   +++  ++
Sbjct: 491 ANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 550

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            ++++  G  P   ++++LI+GL K G+    + +   M  +G   +   YN ++ G C 
Sbjct: 551 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 610

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G + KA  +L+ M      P   TYG I++GL K+ R  +   +    + +   +N  +
Sbjct: 611 SGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVL 670

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKG-------------------------------- 397
           YS+LI G  K G+ ++A  + ++MM+KG                                
Sbjct: 671 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 730

Query: 398 ---CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
              C PNT  YS LI+GLCRV K ++A     +M   G   N  TY++++ G  + G   
Sbjct: 731 EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNIT 790

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A  +++    N  + +   ++ LI G+    +  EA  V+ +   RGC+ ++ +  S++
Sbjct: 791 DAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLL 850

Query: 515 HGLCNAGSVEEA 526
             L  +  +E+A
Sbjct: 851 DALNKSECLEQA 862



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 128/304 (42%), Gaps = 36/304 (11%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           +  IF++  + G + L    + +++  +  SG       +L  M+ +       ++  I 
Sbjct: 582 TSNIFHAMKQQG-FALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIV 640

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH------RALEFYNH 179
               K   ++EA  LF             KS    LNV++   L        R  E Y  
Sbjct: 641 DGLAKIDRLDEAYMLFEE----------AKSKGIELNVVLYSSLIDGFGKVGRIDEAYLI 690

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +       + PN  T+N ++  + +   ++ A+  F+ M    C P+ YTY  L++GLC+
Sbjct: 691 LEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCR 750

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             + ++A +   +MQ  G  P  VT+  +I+GL K G +  A  L +     G +P+  +
Sbjct: 751 VQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAAS 810

Query: 300 YNTLIHGLC----------------LKG---NLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           +N LI G+                 L+G   N+   +SLLD +  S+C+      G ++ 
Sbjct: 811 FNALIEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLR 870

Query: 341 GLVK 344
            + K
Sbjct: 871 EIAK 874


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  235 bits (599), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 245/460 (53%), Gaps = 7/460 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA+ ++EA+ LF    ++    R V    +   +I+  G   +  E Y  +   K    +
Sbjct: 312 KANRLDEAVELF----EQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI 367

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ + +N ++  + +   V+ A+++F EM  R+  P++ TY  L+D LC+E +L+ A+ +
Sbjct: 368 PSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEI 426

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M+  G FP  +T N++I+ LCK  +L  A  + + M  K C PN VT+++LI GL  
Sbjct: 427 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 486

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +D A SL ++M+    +P  + Y ++I    K GR  DG ++   M       +  +
Sbjct: 487 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 546

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            +T +  +FK G+ E    L++++   G  P+   YS LI GL + G  +E  E+ + M 
Sbjct: 547 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 606

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             GC  +   Y++++ GF +SGK +KA ++ ++M         V Y  +I GL +  +L 
Sbjct: 607 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 666

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA M++ +  S G K +VV YSS+I G    G ++EA  +  E+  ++    P+V+T+N 
Sbjct: 667 EAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL--MQKGLTPNVYTWNC 724

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           LL+AL K   I+ ++    SM D  C P+ +T +I +  L
Sbjct: 725 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGL 764



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 258/540 (47%), Gaps = 42/540 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F     +L R + +  +    ++  I    GK   VEEA+R+F  M
Sbjct: 337 AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 396

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V ++N +++++ +EG  + ALE  + +  A    + PN LT N++I  +C+
Sbjct: 397 KRD--AVPNVPTYNILIDMLCREGKLNAALEIRDDMERA---GLFPNVLTVNIMIDRLCK 451

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              ++ A  +F  M  + C P+  T+ +L+DGL K  R+D+A  L ++M   G  P  + 
Sbjct: 452 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 511

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI    K G      K+   M   GC P+    NT +  +   G  +K  +L   + 
Sbjct: 512 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 571

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A   +P+  +Y  +I+GLVK G A +   +  +M+E+   ++ + Y+ +I G  K GK  
Sbjct: 572 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 631

Query: 385 DAMKLWKQMMEKGCKP-----------------------------------NTVVYSALI 409
            A +L ++M  KG  P                                   N VVYS+LI
Sbjct: 632 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 691

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  I+ E++  G   N +T++ L+    ++ + ++A+  ++ M    C 
Sbjct: 692 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP 751

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N++ YS+LI+GLC   K  +A + W +M   G KP+ + Y++MI GL  AG++ EA  L
Sbjct: 752 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 811

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+          PD  +YN ++  L   +    +  L      +GC+    TC + L AL
Sbjct: 812 FSRFKA--NGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 869



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 149/565 (26%), Positives = 266/565 (47%), Gaps = 21/565 (3%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           ++  MR+ K      ++  +  A  +    +  + LFH M  E   +  V  F +++ V 
Sbjct: 182 IIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQM-QELGYEVNVHLFTTLIRVF 240

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
            +EG    AL   + +   K  ++  + + +N+ I    + G VD + + F EM      
Sbjct: 241 AREGRVDAALSLLDEM---KSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLM 297

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           PD  TY +++  LCK NRLDEAV L ++++ +   P    +N +I G    G+   A  L
Sbjct: 298 PDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGL 357

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           ++    KG +P+ + YN ++  L  K  +++A+ + + M     +PN  TY  +I+ L +
Sbjct: 358 LERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCR 416

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G+      +   ME      N    + +I  L K  K E+A  +++ M +K C PN V 
Sbjct: 417 EGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVT 476

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           +S+LIDGL + G+ D+A  +  +M++ G    A  Y+SL++ FF+ G+     +I+K+M 
Sbjct: 477 FSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
              C  +    +  +  + + G+  + R ++ ++ + G  PD  +YS +IHGL  AG   
Sbjct: 537 HTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLAN 596

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           E  +LF  M   E     D   YN +++  CK   ++ +  LL  M  +G  P +VT   
Sbjct: 597 ETYELFYAMK--EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS 654

Query: 585 FLTALK--EKL--------EAPQDGTDF----LNELAIRLFKRQRTSGGFKIVEVMLQKF 630
            +  L   ++L        EA  +G        + L     K  R    + I+E ++QK 
Sbjct: 655 VIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG 714

Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
           L+P   TW  ++  L + + I  A+
Sbjct: 715 LTPNVYTWNCLLDALVKAEEINEAL 739



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 198/432 (45%), Gaps = 39/432 (9%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +EEA  +F  M D+  C     +F+S+++ + + G    A   Y  +++  H   +
Sbjct: 451 KAQKLEEACSIFEGMDDKV-CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH---V 506

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  + +  +I++  + G  ++  ++++EM    C PD+    T MD + K    ++   L
Sbjct: 507 PGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRAL 566

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             E+   G  P   ++++LI+GL K G      +L   M  +GC+ +   YN +I G C 
Sbjct: 567 FREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCK 626

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G ++KA  LL+ M      P  VTYG++I+GL K+ R  +   +    +     +N  +
Sbjct: 627 SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVV 686

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKG-------------------------------- 397
           YS+LI G  K G+ ++A  + +++M+KG                                
Sbjct: 687 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMK 746

Query: 398 ---CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
              C PN + YS LI+GLCRV K ++A     EM   G   N  TY++++ G  ++G   
Sbjct: 747 DLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNIL 806

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A  ++     N  + +   Y+ +I GL    K  +A  ++ +   +GC         ++
Sbjct: 807 EASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLL 866

Query: 515 HGLCNAGSVEEA 526
             L  A  +E+A
Sbjct: 867 DALHKAECLEQA 878



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 197/411 (47%), Gaps = 6/411 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF SLI      G       +  +M     V     +  + +++ K    E+  +++  M
Sbjct: 476 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 535

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V    C   +   N+ ++ + + G   +    +  I NA     +P+  +++++I  + +
Sbjct: 536 VHT-GCSPDLTLINTYMDCVFKAGETEKGRALFREI-NAH--GFIPDARSYSILIHGLVK 591

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GL +   +LF  M  + C  D + Y  ++DG CK  ++++A  LL+EM+V G  PT VT
Sbjct: 592 AGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 651

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +I+GL K   L  A  L +     G   N V Y++LI G    G +D+A  +++ ++
Sbjct: 652 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM 711

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PN  T+  +++ LVK     +      SM++ K   N+  YS LI+GL +  K  
Sbjct: 712 QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFN 771

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A   W++M + G KPNT+ Y+ +I GL + G   EA  +      NG   ++ +Y++++
Sbjct: 772 KAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 831

Query: 445 KGFFESGKGHKAVEIWKDMAKNNC-VYNEVCYSVLIHGLCEDGKLREARMV 494
           +G   + K   A  ++++     C ++ + C  VL+  L +   L +A +V
Sbjct: 832 EGLSSANKAMDAYALFEETRLKGCNIHTKTCV-VLLDALHKAECLEQAAIV 881



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 186/394 (47%), Gaps = 26/394 (6%)

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
           P  +N L+  + +N E     ++++ M L G  P+      L+        L +A  ++ 
Sbjct: 125 PEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQ 184

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEYIYSTLISGLFKE 380
            M   K  P    Y  +I  L ++ R  D   +L   M+E  + VN ++++TLI    +E
Sbjct: 185 TMRKFKFRPAFSAYTILIGALSEV-REPDPMLILFHQMQELGYEVNVHLFTTLIRVFARE 243

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ + A+ L  +M       + V+Y+  ID   + GK D + +   EM ++G   +  TY
Sbjct: 244 GRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTY 303

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +S++    ++ +  +AVE+++ + +N  V     Y+ +I G    GK  EA  +  +  +
Sbjct: 304 TSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKA 363

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           +G  P V+AY+ ++  L     VEEAL++F EM   +  + P+V TYNIL++ LC++  +
Sbjct: 364 KGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM---KRDAVPNVPTYNILIDMLCREGKL 420

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
           + ++++ + M   G  P+++T NI +                      RL K Q+     
Sbjct: 421 NAALEIRDDMERAGLFPNVLTVNIMID---------------------RLCKAQKLEEAC 459

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            I E M  K  +P   T+  ++  L +  R+  A
Sbjct: 460 SIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDA 493



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 179/428 (41%), Gaps = 38/428 (8%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N ++  + R    D+  ++  EM +    P       L+    K  +L EA  ++  M
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +     P    + +LI  L +  E      L   M   G   N   + TLI     +G +
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 314 DKAVSLLDRM-------------VASKC----------------------MPNEVTYGTI 338
           D A+SLLD M             V   C                      MP++VTY ++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I  L K  R  +   +   +E+ +     Y Y+T+I G    GK ++A  L ++   KG 
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ + Y+ ++  L +  + +EA  I FE +      N  TY+ L+      GK + A+E
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRI-FEEMKRDAVPNVPTYNILIDMLCREGKLNAALE 425

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           I  DM +     N +  +++I  LC+  KL EA  ++  M  + C P+ V +SS+I GL 
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G V++A  L+ +M  L+    P    Y  L+ +  K         +   M+  GC PD
Sbjct: 486 KCGRVDDAYSLYEKM--LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPD 543

Query: 579 LVTCNIFL 586
           L   N ++
Sbjct: 544 LTLINTYM 551



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/460 (23%), Positives = 195/460 (42%), Gaps = 28/460 (6%)

Query: 197 LVIKTVCRLGLVDNAIQLF----REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           LVI  + RL   + A+  F    ++    +C P+ Y   +L+  + +    D    +L+E
Sbjct: 94  LVIGVLKRLKDANTAVNYFQWAEKQTEKVHC-PEAYN--SLLMVMARNTEFDHLERILEE 150

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M + G  P+      L+    K+ +L  A  ++  M      P    Y  LI  L     
Sbjct: 151 MSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVRE 210

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
            D  + L  +M       N   + T+I    + GR      +L  M+      +  +Y+ 
Sbjct: 211 PDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNV 270

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
            I    K GK + + K + +M   G  P+ V Y+++I  LC+  + DEA E+  ++  N 
Sbjct: 271 CIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNR 330

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
               A+ Y++++ G+  +GK  +A  + +       + + + Y+ ++  L +  ++ EA 
Sbjct: 331 KVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEAL 390

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++ +M  R   P+V  Y+ +I  LC  G +  AL++ ++M        P+V T NI+++
Sbjct: 391 RIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDM--ERAGLFPNVLTVNIMID 447

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK------------EKL----EAP 596
            LCK   +  +  +   M D+ C P+ VT +  +  L             EK+      P
Sbjct: 448 RLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP 507

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
             G      L    FK  R   G KI + M+    SP  +
Sbjct: 508 --GAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLT 545


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 222/430 (51%), Gaps = 5/430 (1%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R   S+  +L   +    ++ AL+ +  +V   H   LP+ + F  ++  + ++   D  
Sbjct: 46  RAFSSYRKILRNGLHNLQFNDALDLFTRMV---HSRPLPSIIDFTRLLSVIAKMNRYDVV 102

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           I LF +M +    P + T   +M  +C  ++   A   L +M   G  P  VTF  L+NG
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            C    +  A  L D +   G  PN VTY TLI  LC   +L+ AV L ++M  +   PN
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY  ++ GL ++GR  D A +L  M +R+   N   ++ LI    K GK  +A +L+ 
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M++    P+   Y +LI+GLC  G  DEA ++ + M  NGC  N   Y++L+ GF +S 
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +    ++I+ +M++   V N + Y+VLI G C  G+   A+ V+ QM SR   PD+  Y+
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            ++ GLC  G VE+AL +F  M   + +   ++ TY I++  +CK   +  + DL  S+ 
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYM--RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460

Query: 572 DRGCDPDLVT 581
            +G  P+++T
Sbjct: 461 SKGMKPNVIT 470



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/344 (35%), Positives = 195/344 (56%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +TF  ++   C    +++AI LF ++     +P++ TY TL+  LCK   L+ AV L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            ++M  +G  P  VT+N L+ GLC+ G  G AA L+ +M  +   PN +T+  LI     
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L +A  L + M+     P+  TYG++INGL   G   +  ++   ME    + NE I
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI G  K  + ED MK++ +M +KG   NT+ Y+ LI G C VG+PD A+E+  +M 
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +     +  TY+ L+ G   +GK  KA+ I++ M K     N V Y+++I G+C+ GK+ 
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +A  ++  + S+G KP+V+ Y++MI G C  G + EA  LF +M
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 229/445 (51%), Gaps = 10/445 (2%)

Query: 136 EAIRLFHTMVDEFHCKR--TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +A+ LF  MV   H +   ++  F  +L+VI +   Y   +  +  +   + + I P   
Sbjct: 66  DALDLFTRMV---HSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM---QILGIPPLLC 119

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N+V+  VC       A     +M     EPD+ T+ +L++G C  NR+++A+ L D++
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  VT+  LI  LCKN  L  A +L + M   G  PN VTYN L+ GLC  G  
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A  LL  M+  +  PN +T+  +I+  VK+G+ ++   +   M +   + + + Y +L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+GL   G  ++A +++  M   GC PN V+Y+ LI G C+  + ++  +I +EM   G 
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
            AN  TY+ L++G+   G+   A E++  M+      +   Y+VL+ GLC +GK+ +A M
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  M  R    ++V Y+ +I G+C  G VE+A  LF  +       +P+V TY  +++ 
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF--SKGMKPNVITYTTMISG 477

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPD 578
            C++  I  +  L   M + G  P+
Sbjct: 478 FCRRGLIHEADSLFKKMKEDGFLPN 502



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 215/446 (48%), Gaps = 23/446 (5%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           ++A+ LF  M      P I  +  L+  + K NR D  + L ++MQ+ G  P   T N++
Sbjct: 65  NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           ++ +C + +  RA+  +  M   G  P+ VT+ +L++G C    ++ A++L D+++    
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            PN VTY T+I  L K         +   M       N   Y+ L++GL + G+  DA  
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L + MM++  +PN + ++ALID   +VGK  EA+E+   MI      + FTY SL+ G  
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             G   +A +++  M +N C  NEV Y+ LIHG C+  ++ +   ++ +M  +G   + +
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +I G C  G  + A ++FN+M     ++ PD+ TYN+LL+ LC    +  ++ +  
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMS--SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
            M  R  D ++VT  I +  +  KL   +D  D    L                      
Sbjct: 423 YMRKREMDINIVTYTIIIQGMC-KLGKVEDAFDLFCSL--------------------FS 461

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAA 654
           K + P   T+  ++   CR   I  A
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEA 487



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 177/355 (49%), Gaps = 3/355 (0%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F S+LN          A+  ++ I+    M   PN +T+  +I+ +C+   +++A++LF
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILG---MGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M      P++ TY  L+ GLC+  R  +A  LL +M      P  +TF  LI+   K 
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A +L + M      P+  TY +LI+GLC+ G LD+A  +   M  + C PNEV Y
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+I+G  K  R  DG ++   M ++    N   Y+ LI G    G+ + A +++ QM  
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +   P+   Y+ L+DGLC  GK ++A  I   M       N  TY+ +++G  + GK   
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           A +++  +       N + Y+ +I G C  G + EA  ++ +M   G  P+   Y
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 135/403 (33%), Positives = 216/403 (53%), Gaps = 12/403 (2%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T + VI+ +C+ G VD+A+ L   M  R   PD+ T+  L++ LCK +++ EA   L  M
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 254 ------QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL-KGCLPNEVTYNTLIHG 306
                 +   CF    ++N L+N LCK  ++ +A  +   M   +  +P+ V+Y+ LI G
Sbjct: 111 NRTISTRASSCF----SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDG 166

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C    L +A  L  +M+   C+PN  TY   +NGL++ GR  D   V   M       +
Sbjct: 167 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPD 226

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              YSTLI G     K + A +L++ M+ +GC+PN V Y+ L+ GLC+  KPDEA E+  
Sbjct: 227 VITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 286

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +M+  GC  +  TY++L+ GF   GK  +AVE++ +M       + V Y+ L+ G    G
Sbjct: 287 KMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 346

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K  EAR ++  M+SR CKPD V+++ MI GL  A  +++A+++F  M   +    PD+ T
Sbjct: 347 KPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERME-QDHGCSPDLVT 405

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           YN L+  LC +  +S ++ +   +      PD    N+ L A+
Sbjct: 406 YNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/437 (30%), Positives = 216/437 (49%), Gaps = 36/437 (8%)

Query: 229 TYCTLMDGLCKENRLD---EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
            +   + GLCK  +++   EA   + E       P+  T + +I  LCK G +  A  L+
Sbjct: 13  AWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLL 72

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM------VASKCMPNEVTYGTII 339
           + M  +G  P+  T++ LI+ LC    + +A   L  M       AS C     +Y +++
Sbjct: 73  ETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCF----SYNSLL 128

Query: 340 NGLVKLGRAVDGARVLMSM-EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           N L K  +      +  +M  ER    +   YS LI G  K  +   A KL+KQM++  C
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC 188

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PN   Y+A ++GL R G+  +A+ +  EMI+ GC+ +  TYS+L+ GF  + K  +A E
Sbjct: 189 VPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHE 248

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +++ M    C  N V Y+ L+HGLC++ K  EA  ++ +M+ RGC PD V Y+++++G C
Sbjct: 249 LFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFC 308

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           N G +E+A+++F+EM+       PDV  YN LL    +      +  L   M+ R C PD
Sbjct: 309 NVGKIEQAVEVFDEMV--SKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPD 366

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
            V+ NI +  L  K +   D        A+ +F+R     G            SP   T+
Sbjct: 367 TVSHNIMIDGLS-KAKRLDD--------AVEVFERMEQDHG-----------CSPDLVTY 406

Query: 639 ERVVQELCRPKRIQAAI 655
             ++  LC  +R+  A+
Sbjct: 407 NSLIFGLCGEQRLSEAM 423



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 205/394 (52%), Gaps = 4/394 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  V+ A+ L  TM+   +C   + + + ++N + +      A EF   + N       
Sbjct: 61  KAGRVDSALSLLETMIKRGYCP-DMATHSMLINELCKADKIQEAQEFLQGM-NRTISTRA 118

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            +  ++N ++ ++C+   V  A  +F  M   R+  PD+ +Y  L+DG CK + L  A  
Sbjct: 119 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEK 178

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L  +M    C P   T+N  +NGL + G +  A  + + M   GC P+ +TY+TLIHG  
Sbjct: 179 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFS 238

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           L    D+A  L + M++  C PN VTY  +++GL K  +  +   +   M ER    ++ 
Sbjct: 239 LARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKV 298

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+TL+ G    GK E A++++ +M+ KG  P+ V Y+ L+ G  R GKP EA ++   M
Sbjct: 299 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVM 358

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN-CVYNEVCYSVLIHGLCEDGK 487
           ++  C  +  +++ ++ G  ++ +   AVE+++ M +++ C  + V Y+ LI GLC + +
Sbjct: 359 VSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQR 418

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           L EA  V+ ++      PD  A++ ++  +  AG
Sbjct: 419 LSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 177/333 (53%), Gaps = 4/333 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +  +  KA  V +A  +F TMV E      V S++ +++   +     RA + Y  
Sbjct: 123 SYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQ 182

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++   +N +PN  T+N  +  + R G + +A  ++ EM    C PD+ TY TL+ G   
Sbjct: 183 MID---LNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSL 239

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             + D+A  L + M   GC P  VT+N L++GLCK  +   A +L   M  +GC P++VT
Sbjct: 240 ARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVT 299

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y TL++G C  G +++AV + D MV+    P+ V Y  ++ G  + G+  +  ++   M 
Sbjct: 300 YTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMV 359

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM-MEKGCKPNTVVYSALIDGLCRVGKP 418
            R+   +   ++ +I GL K  + +DA++++++M  + GC P+ V Y++LI GLC   + 
Sbjct: 360 SRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRL 419

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            EA ++  E+     + +   ++ L++  + +G
Sbjct: 420 SEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 5/179 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +EA  LF  MV E  C     ++ ++L      G   +A+E ++ +V+  H    P+ + 
Sbjct: 279 DEAHELFRKMV-ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD---PDVVA 334

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N ++K   R G    A QLF+ M  R C+PD  ++  ++DGL K  RLD+AV + + M+
Sbjct: 335 YNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERME 394

Query: 255 VD-GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
            D GC P  VT+N LI GLC    L  A K+   +      P+   +N L+  +   G+
Sbjct: 395 QDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 106/198 (53%), Gaps = 8/198 (4%)

Query: 401 NTVVYSALIDGLCRVGKPDEAEE---ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           N V ++A + GLC+ GK ++A E    + E +++    ++ T  S+++   ++G+   A+
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK---PDVVAYSSMI 514
            + + M K     +   +S+LI+ LC+  K++EA+  + Q ++R          +Y+S++
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE-FLQGMNRTISTRASSCFSYNSLL 128

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           + LC A  V +A  +F+ M+  E    PDV +Y+IL++  CK   +  +  L   M+D  
Sbjct: 129 NSLCKAKKVHQAFAIFSTMVS-ERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN 187

Query: 575 CDPDLVTCNIFLTALKEK 592
           C P++ T N FL  L  K
Sbjct: 188 CVPNVTTYNAFLNGLMRK 205


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 241/436 (55%), Gaps = 5/436 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++K+   +L+ +++     ++ E Y+ I       I+P+   F+ +I   C+    D+AI
Sbjct: 220 SLKTCTFLLSSLVKANELKKSYEVYDFICLG---GIIPDVHLFSTMINAFCKGHREDDAI 276

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            LF +M      P++ TY  ++ GLCK  RLDEA    ++M  +   P+ +T++V INGL
Sbjct: 277 GLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGL 336

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            K  ++  A  ++  M   G +PNEV YNTLI G C  GN+ +A+ + D M++    PN 
Sbjct: 337 IKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNS 396

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VT  ++I G  K  +      VL  M  R   +N+  +S +I+ L  + +   A+   ++
Sbjct: 397 VTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIRE 456

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +  +PN  + + L+ GLC+ GK  EA E+   ++  G   N  T ++L+ G  ++G 
Sbjct: 457 MLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGN 516

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             + +++ +DM +   V++ + Y+ LI G C++GK++E   +  +M+ +G +PD+  ++ 
Sbjct: 517 MQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNL 576

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           ++HGLCNA  ++EA +L++E  C +    P+V+TY ++++  CK + +    +LLN ++ 
Sbjct: 577 LLHGLCNADKIDEASRLWHE--CKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVS 634

Query: 573 RGCDPDLVTCNIFLTA 588
           +  + + V  N  + A
Sbjct: 635 KKLELNSVVYNSLIRA 650



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/448 (31%), Positives = 225/448 (50%), Gaps = 24/448 (5%)

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           + LF TM++ F CK                   HR  +        + + + PN +T+N 
Sbjct: 256 VHLFSTMINAF-CKG------------------HREDDAIGLFSKMEKLGVAPNVVTYNN 296

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I  +C+ G +D A +   +M      P + TY   ++GL K  ++DEA  +L EM   G
Sbjct: 297 IIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELG 356

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  V +N LI+G CK G +  A K+ D+M  KG  PN VT N+LI G C    + +A 
Sbjct: 357 FVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAE 416

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           ++L+ M+      N+ ++  +IN L    R V     +  M  R    N+ + +TL+SGL
Sbjct: 417 NVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGL 476

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K GK  +A++LW +++ KG  PN V  +ALI GLC+ G   E  ++L +M+  G   + 
Sbjct: 477 CKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDR 536

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY++L+ G  + GK  +  E+ ++M K     +   +++L+HGLC   K+ EA  +W +
Sbjct: 537 ITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHE 596

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
               G  P+V  Y  MI G C A  VEE   L NE+  +  K + +   YN L+ A C  
Sbjct: 597 CKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNEL--VSKKLELNSVVYNSLIRAYCIN 654

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            N++ +  L + M  RG    L++C  +
Sbjct: 655 GNMNAAFRLRDDMKSRGV---LLSCATY 679



 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 155/537 (28%), Positives = 249/537 (46%), Gaps = 72/537 (13%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  +  A+ K H  ++AI LF  M ++      V ++N++++ + + G    A  F   +
Sbjct: 259 FSTMINAFCKGHREDDAIGLFSKM-EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKM 317

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V  K   + P+ +T+++ I  + +L  +D A  + +EM      P+   Y TL+DG CK 
Sbjct: 318 VKEK---VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKM 374

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-------- 292
             + EA+ + D+M   G  P  VT N LI G CK+ ++G+A  +++ M  +G        
Sbjct: 375 GNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSF 434

Query: 293 -------CL--------------------PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
                  CL                    PN+    TL+ GLC  G   +AV L  R++ 
Sbjct: 435 SMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLG 494

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
              +PN VT   +I+GL K G   +  ++L  M ER    +   Y+TLISG  KEGK ++
Sbjct: 495 KGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKE 554

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
             +L ++M++KG +P+   ++ L+ GLC   K DEA  +  E   NG   N +TY  ++ 
Sbjct: 555 GFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMID 614

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G+ ++ K  +   +  ++       N V Y+ LI   C +G +  A  +   M SRG   
Sbjct: 615 GYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLL 674

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEM-----------------------------LCL 536
               YSS++HGLCN G V++A  L +EM                             + L
Sbjct: 675 SCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVL 734

Query: 537 EPKS----QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +  S     P+ FTY I+++  CK      +  LLN M ++G  PD VT N F   L
Sbjct: 735 QEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGL 791



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 147/481 (30%), Positives = 232/481 (48%), Gaps = 30/481 (6%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL------------EFYNHIVNAK 184
           A+  FH + +    + T +S+  ++++++   L   A              FY     ++
Sbjct: 103 ALNFFHFVSETCKFRFTARSYCVLIHLLVGNDLLSPARLLLIRLIDGKVPAFYARNFESR 162

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVD----------------NAIQLFREMPVRNCEPDIY 228
           H  I      FNLV + V  + + D                 A  +F  +  +   P + 
Sbjct: 163 HFEIAQIMADFNLVFEPVIGVKIADLLVHVYSTQFKHLGFGFAADVFSLLAKKGLFPSLK 222

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           T   L+  L K N L ++  + D + + G  P    F+ +IN  CK      A  L   M
Sbjct: 223 TCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKM 282

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              G  PN VTYN +IHGLC  G LD+A    ++MV  K  P+ +TY   INGL+KL + 
Sbjct: 283 EKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKI 342

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +   VL  M E  F  NE +Y+TLI G  K G   +A+K+   M+ KG  PN+V  ++L
Sbjct: 343 DEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSL 402

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I G C+  +  +AE +L EMI  G   N  ++S ++       +   A+   ++M   N 
Sbjct: 403 IQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNL 462

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N+   + L+ GLC+ GK  EA  +W ++L +G  P++V  +++IHGLC AG+++E LK
Sbjct: 463 RPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLK 522

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L  +M  LE     D  TYN L++  CK+  +    +L   M+ +G  PD+ T N+ L  
Sbjct: 523 LLRDM--LERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHG 580

Query: 589 L 589
           L
Sbjct: 581 L 581



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 212/410 (51%), Gaps = 14/410 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           SF+ V+N +  +  +  AL F   ++     N+ PN      ++  +C+ G    A++L+
Sbjct: 433 SFSMVINWLCLKFRFVTALHFIREML---LRNLRPNDGLLTTLVSGLCKAGKQGEAVELW 489

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             +  +   P+I T   L+ GLCK   + E + LL +M   G     +T+N LI+G CK 
Sbjct: 490 CRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKE 549

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G++    +L + M  KG  P+  T+N L+HGLC    +D+A  L      +  +PN  TY
Sbjct: 550 GKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTY 609

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
           G +I+G  K  +  +G  +L  +  +K  +N  +Y++LI      G    A +L   M  
Sbjct: 610 GVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKS 669

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +G   +   YS+L+ GLC +G  D+A+ +L EM   G   N   Y++++ G+ + G+ +K
Sbjct: 670 RGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNK 729

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
              + ++M+ +N   N+  Y+++I G C+ GK +EA  +  +M  +G  PD V Y++  +
Sbjct: 730 VNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTN 789

Query: 516 GLCNAGSVEEALKLFNEM----LCLEPKSQPDVFTYNILLNALCKQSNIS 561
           GLC  G VEEA K+ +EM    +CL      D  TY  L++  C Q + +
Sbjct: 790 GLCKEGKVEEAFKVCDEMSSGAVCL------DEITYTTLIDG-CHQPSTA 832



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 124/271 (45%), Gaps = 14/271 (5%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRT-----VKSFNSVLNVIIQEGLYHRAL 174
           +F  +      A  ++EA RL+H       CK+      V ++  +++   +        
Sbjct: 573 TFNLLLHGLCNADKIDEASRLWH------ECKKNGYVPNVYTYGVMIDGYCKANKVEEGE 626

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
              N +V+ K   +  N++ +N +I+  C  G ++ A +L  +M  R       TY +LM
Sbjct: 627 NLLNELVSKK---LELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLM 683

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            GLC    +D+A  LLDEM+ +G  P  V +  +I G  K G++ +   ++  M      
Sbjct: 684 HGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIH 743

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN+ TY  +I G C  G   +A  LL+ M     +P+ VTY    NGL K G+  +  +V
Sbjct: 744 PNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKV 803

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
              M      ++E  Y+TLI G  +   A +
Sbjct: 804 CDEMSSGAVCLDEITYTTLIDGCHQPSTATN 834


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 265/508 (52%), Gaps = 41/508 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +   + K   V++A  LFH M+ +      V ++NS+++ + +     +A+    H
Sbjct: 202 SYNTVIDGFFKEGEVDKAYFLFHEMMGQ-GLPPDVVTYNSLIDGLCKAQAMDKAVAILQH 260

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + +     ++P+T T+N++I+  C LG ++ A++L ++M     +PD+ TY  L+   CK
Sbjct: 261 MFDK---GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCK 317

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPV-----------------------------------T 264
             R  EA  + D M   G  P                                       
Sbjct: 318 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 377

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN+LI    K+G + +A      M   G  P+ V+Y+T+IH LC  G ++ AV   ++MV
Sbjct: 378 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMV 437

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    PN +++ ++I+GL  +G       +   M  R  H +    +T++  L KEG+  
Sbjct: 438 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 497

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A   +  ++  G KP+ V Y+ LIDG C VGK DE+ + L  M++ G   +++TY+SL+
Sbjct: 498 EAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLL 557

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+F++G+   A+ ++++M + +  +  +  ++++HGL + G++  AR ++ +M+ RG +
Sbjct: 558 NGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQ 617

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
             +  Y++++ GLC    V+EAL++F ++   E   + DV T++I++NAL K   I  + 
Sbjct: 618 LRIETYNTVLGGLCENSCVDEALRMFEDLRSKE--FELDVRTFSIVINALLKVGRIDEAK 675

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            L ++M+ RG  PD++T ++ + +  E+
Sbjct: 676 SLFSAMVLRGPVPDVITYSLMIKSHIEE 703



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 230/466 (49%), Gaps = 2/466 (0%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K     +  ++A+ +    + E      V S+N+++  +  E     ALE   H+   
Sbjct: 132 LIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTAD 191

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
              N  PN +++N VI    + G VD A  LF EM  +   PD+ TY +L+DGLCK   +
Sbjct: 192 GGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAM 251

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+AV +L  M   G  P   T+N++I G C  G+L  A +L+  M   G  P+ VTY+ L
Sbjct: 252 DKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLL 311

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I   C  G   +A S+ D MV     PN   Y  +++G    G  +D   +L  M     
Sbjct: 312 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGI 371

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
                 ++ LI    K G  + AM  + +M + G +P+ V YS +I  LC+ G+ ++A  
Sbjct: 372 PFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVY 431

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
              +M++ G + N  +++SL+ G    G+  K  E+  +M       + +  + ++  LC
Sbjct: 432 HFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLC 491

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           ++G++ EA+  +  ++  G KPDVV+Y+++I G C  G ++E++K  + M+ +  +  PD
Sbjct: 492 KEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLR--PD 549

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +TYN LLN   K   +  ++ L   M  +      +T NI L  L
Sbjct: 550 SWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGL 595



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 229/456 (50%), Gaps = 27/456 (5%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGL--YHRALEFYNHIVNAKHMNILPNTLTFNL 197
           ++H ++  +  K  +     +L+++I++G+   HRA                     FN+
Sbjct: 342 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA---------------------FNI 380

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I    + G VD A+  F EM      PD+ +Y T++  LCK  R+++AV   ++M  +G
Sbjct: 381 LICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG 440

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  ++F  LI+GLC  GE  +  +L   M  +G  P+ +  NT++  LC +G + +A 
Sbjct: 441 LSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQ 500

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
              D ++     P+ V+Y T+I+G   +G+  +  + L  M       + + Y++L++G 
Sbjct: 501 DFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGY 560

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
           FK G+ EDA+ L+++M  K  K   +  + ++ GL + G+   A E+  +M++ G     
Sbjct: 561 FKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRI 620

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY++++ G  E+    +A+ +++D+       +   +S++I+ L + G++ EA+ +++ 
Sbjct: 621 ETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSA 680

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCK 556
           M+ RG  PDV+ YS MI      G +EE+  LF   L +E      D    NI++  L +
Sbjct: 681 MVLRGPVPDVITYSLMIKSHIEEGLLEESDNLF---LSMEKNGCAADSHMLNIIVRRLLE 737

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           + ++  +   L  + ++    +  T  + +  + EK
Sbjct: 738 KGDVRRAGTYLTKIDEKNFSLEASTAALLIPIVSEK 773



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 191/425 (44%), Gaps = 44/425 (10%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE-------AVLLLDEMQVDGCFPT 261
           ++A+ LF E+  +     ++ + +++  + + +           AV L + M   G    
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL- 320
                +LI   C  G L  A          G     VT N LI GLC     D A+ ++ 
Sbjct: 91  AAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVF 150

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH---VNEYIYSTLISGL 377
            RM      P+  +Y  +I GL    ++ +   +L+ M     +    N   Y+T+I G 
Sbjct: 151 RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGF 210

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
           FKEG+ + A  L+ +MM +G  P+ V Y++LIDGLC+    D+A  IL  M + G   + 
Sbjct: 211 FKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDT 270

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY+ +++G+   G+  +AV + K M+ +    + V YS+LI   C+ G+  EAR V+  
Sbjct: 271 RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDS 330

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGS---VEEALKL------------FNEMLCLEPKS-- 540
           M+ +G KP+   Y  ++HG    G+   V + L L            FN ++C   K   
Sbjct: 331 MVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGA 390

Query: 541 ----------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
                           +PDV +Y+ +++ LCK   +  ++   N M+  G  P++++   
Sbjct: 391 VDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTS 450

Query: 585 FLTAL 589
            +  L
Sbjct: 451 LIHGL 455



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 22/219 (10%)

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           AV ++  M ++          +LI   C  G+L  A   +   L  G +   V  + +I 
Sbjct: 75  AVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIK 134

Query: 516 GLCNAGSVEEALKL-FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           GLC+    ++A+ + F  M   E    PDVF+YN L+  LC +     +++LL  M   G
Sbjct: 135 GLCDGNRTDDAMDMVFRRM--PELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADG 192

Query: 575 ---CDPDLVTCNIFLTALKEKLEA---------------PQDGTDFLNELAIRLFKRQRT 616
              C P++V+ N  +    ++ E                P D   + N L   L K Q  
Sbjct: 193 GYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTY-NSLIDGLCKAQAM 251

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                I++ M  K + P T T+  +++  C   +++ A+
Sbjct: 252 DKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAV 290


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 153/522 (29%), Positives = 245/522 (46%), Gaps = 52/522 (9%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+    + +++ + + G V+ A+ L + +      P+I+ Y  L+D LCK    DEA LL
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELL 389

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D M   G  P  VT+++LI+  C+ G+L  A   +  M   G  P+   YN+LI+G C 
Sbjct: 390 FDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCK 449

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G++  A SL+  M+  K  P  VTY +++ G    G+     R+   M  +    + Y 
Sbjct: 450 FGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYT 509

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++TL+SGLF+ G   DA+KL+ +M E   KPN V Y+ +I+G C  G   +A E L EMI
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMI 569

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   + ++Y  L+ G   +G+  +A      + K NC  NE+CY+ L+HG C +GKL 
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629

Query: 490 EARMV-----------------------------------WTQMLSRGCKPDVVAYSSMI 514
           EA  V                                     +M  RG KPD V Y+SMI
Sbjct: 630 EALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMI 689

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
                 G  +EA  +++ M  +     P+  TY  ++N LCK   ++ +  L + M    
Sbjct: 690 DAKSKTGDFKEAFGIWDLM--INEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGN 747

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLN-------------ELAIRLFKRQ-RTSGGF 620
             P+ VT   FL  L + +   +   +  N              + IR F RQ R     
Sbjct: 748 SVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEAS 807

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
           +++  M+   +SP   T+  ++ ELCR   ++ AI + W+++
Sbjct: 808 ELITRMIGDGVSPDCITYTTMISELCRRNDVKKAI-ELWNSM 848



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/430 (30%), Positives = 224/430 (52%), Gaps = 7/430 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV ++ S++     +G  ++AL  Y+ +       I+P+  TF  ++  + R GL+ +A+
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGK---GIVPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +LF EM   N +P+  TY  +++G C+E  + +A   L+EM   G  P   ++  LI+GL
Sbjct: 528 KLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGL 587

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C  G+   A   VD +    C  NE+ Y  L+HG C +G L++A+S+   M       + 
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDL 647

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           V YG +I+G +K         +L  M +R    ++ IY+++I    K G  ++A  +W  
Sbjct: 648 VCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES-G 451
           M+ +GC PN V Y+A+I+GLC+ G  +EAE +  +M       N  TY   +    +  G
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVG 767

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              KAVE+   + K   + N   Y++LI G C  G++ EA  + T+M+  G  PD + Y+
Sbjct: 768 DMKKAVELHNAILKG-LLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYT 826

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +MI  LC    V++A++L+N M   E   +PD   YN L++  C    +  + +L N M+
Sbjct: 827 TMISELCRRNDVKKAIELWNSMT--EKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884

Query: 572 DRGCDPDLVT 581
            +G  P+  T
Sbjct: 885 RQGLKPNTET 894



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 169/601 (28%), Positives = 276/601 (45%), Gaps = 55/601 (9%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA---IRLFH 142
           F  LIQHY  S                 R VL+   +F      K  L+ E      L H
Sbjct: 159 FDLLIQHYVRS-----------------RRVLDGVLVFKM-MMTKVSLLPEVRTLSALLH 200

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYH-----RALEFYNHIVNAKHMNIL-------P 190
            +V   H    ++ F+ ++NV I+  +Y      R+L     +  AK M +         
Sbjct: 201 GLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDV 260

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N + +N++I  +C+   V  A+ + +++  +  +PD+ TYCTL+ GLCK    +  + ++
Sbjct: 261 NIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMI 320

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM      P+    + L+ GL K G++  A  LV  +   G  PN   YN LI  LC  
Sbjct: 321 DEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKG 380

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
            N D+A  L DRM      PN+VTY  +I+   + G+       L  M +     + Y Y
Sbjct: 381 RNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPY 440

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           ++LI+G  K G    A  L  +M+ K  +P  V Y++L+ G C  GK ++A  +  EM  
Sbjct: 441 NSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   + +T+++L+ G F +G    AV+++ +MA+ N   N V Y+V+I G CE+G + +
Sbjct: 501 KGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSK 560

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A     +M+ +G  PD  +Y  +IHGLC  G   EA K+F + L  +   + +   Y  L
Sbjct: 561 AFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGL-HKGNCELNEICYTGL 618

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN-------------IFLTALKEKLEAPQ 597
           L+  C++  +  ++ +   M  RG D DLV                +FL  LKE  +   
Sbjct: 619 LHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGL 678

Query: 598 DGTDFLNELAIRLFKRQRTSGGFK----IVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
              D    +   +   +  +G FK    I ++M+ +   P   T+  V+  LC+   +  
Sbjct: 679 KPDDV---IYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNE 735

Query: 654 A 654
           A
Sbjct: 736 A 736



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 213/432 (49%), Gaps = 8/432 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  Y + G       + + M  +  V    +F  +     +A L+ +A++LF  M
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEM 533

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E++ K    ++N ++    +EG   +A EF N ++      I+P+T ++  +I  +C 
Sbjct: 534 A-EWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEK---GIVPDTYSYRPLIHGLCL 589

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G    A      +   NCE +   Y  L+ G C+E +L+EA+ +  +M + G     V 
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVC 649

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + VLI+G  K+ +      L+  M  +G  P++V Y ++I      G+  +A  + D M+
Sbjct: 650 YGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKE-GK 382
              C+PNEVTY  +INGL K G  V+ A +L S M       N+  Y   +  L K  G 
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAG-FVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGD 768

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A++L   ++ KG   NT  Y+ LI G CR G+ +EA E++  MI +G + +  TY++
Sbjct: 769 MKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTT 827

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++          KA+E+W  M +     + V Y+ LIHG C  G++ +A  +  +ML +G
Sbjct: 828 MISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887

Query: 503 CKPDVVAYSSMI 514
            KP+     + I
Sbjct: 888 LKPNTETSETTI 899



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 113/489 (23%), Positives = 186/489 (38%), Gaps = 106/489 (21%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV---------------------- 298
           +  +F +LI+ L +      A+ L+  + L+   P+EV                      
Sbjct: 103 STASFCILIHALVQANLFWPASSLLQTLLLRALKPSEVFDALFSCYEKCKLSSSSSFDLL 162

Query: 299 -------------------------------TYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
                                          T + L+HGL    +   A+ L D M+   
Sbjct: 163 IQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINVG 222

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+   Y  +I  L +L        +++ ME     VN   Y+ LI GL K+ K  +A+
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRV-------------------------------- 415
            + K +  K  KP+ V Y  L+ GLC+V                                
Sbjct: 283 GIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGL 342

Query: 416 ---GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
              GK +EA  ++  +   G + N F Y++L+    +     +A  ++  M K     N+
Sbjct: 343 RKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPND 402

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V YS+LI   C  GKL  A     +M+  G KP V  Y+S+I+G C  G +  A  L  E
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAE 462

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M  +  K +P V TY  L+   C +  I+ ++ L + M  +G  P + T    L+ L  +
Sbjct: 463 M--INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLF-R 519

Query: 593 LEAPQDGTDFLNELAIRLFKRQRT---------------SGGFKIVEVMLQKFLSPQTST 637
               +D      E+A    K  R                S  F+ +  M++K + P T +
Sbjct: 520 AGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYS 579

Query: 638 WERVVQELC 646
           +  ++  LC
Sbjct: 580 YRPLIHGLC 588



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/223 (30%), Positives = 108/223 (48%), Gaps = 6/223 (2%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D  + S+I   + +GDFK    +   M  E  V  E ++  +     KA  V EA  L  
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCS 741

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQE-GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            M         V ++   L+++ +  G   +A+E +N I+      +L NT T+N++I+ 
Sbjct: 742 KMRPGNSVPNQV-TYGCFLDILTKGVGDMKKAVELHNAILKG----LLANTATYNMLIRG 796

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            CR G ++ A +L   M      PD  TY T++  LC+ N + +A+ L + M   G  P 
Sbjct: 797 FCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPD 856

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            V +N LI+G C  GE+G+A +L + M  +G  PN  T  T I
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 110/241 (45%), Gaps = 43/241 (17%)

Query: 139 RLFHTMVDEFHCKRTVKS----FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++F  ++ E H  R +K     + S+++   + G +  A   ++ ++N      +PN +T
Sbjct: 664 KVFLGLLKEMH-DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE---GCVPNEVT 719

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD------------------- 235
           +  VI  +C+ G V+ A  L  +M   N  P+  TY   +D                   
Sbjct: 720 YTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI 779

Query: 236 ----------------GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                           G C++ R++EA  L+  M  DG  P  +T+  +I+ LC+  ++ 
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVK 839

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           +A +L ++M  KG  P+ V YNTLIHG C+ G + KA  L + M+     PN  T  T I
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899

Query: 340 N 340
           +
Sbjct: 900 S 900


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 147/491 (29%), Positives = 249/491 (50%), Gaps = 7/491 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SLI   + S DF  +  +    + +  ++   +   + +++G   +VEE + ++  M 
Sbjct: 158 YVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRM- 216

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E   + ++ +FN +LN ++       A   +  +   K   I P+ +++N +IK  C+ 
Sbjct: 217 KESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGK---IGPDVVSYNTMIKGYCKA 273

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G    A++ F +M  RN EPD  TY TL+     E   D  + L  EM+  G    P  +
Sbjct: 274 GNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAY 333

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           +++I GLCK+G     + + +NM  KGC  N   Y  LI      GN+++A++L +RM  
Sbjct: 334 SLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKG 393

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               P++VTYG I+NGL K GR  +        ++ +  VN   YS+LI GL K G+ ++
Sbjct: 394 EGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDE 453

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A K +++M+E+GC  ++  Y+ALID L + GK +EA  +   M   GC    +TY+ L+ 
Sbjct: 454 AEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILIS 513

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G F+  +  +A+++W  M           +  L  GLC  GK+  A  +  ++   G  P
Sbjct: 514 GLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIP 573

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           +  A+  MI+ LC AG  E+A KL + ++    +    V T  IL+NAL K  N   ++ 
Sbjct: 574 E-TAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRT--ILINALRKAGNADLAMK 630

Query: 566 LLNSMMDRGCD 576
           L++S +  G D
Sbjct: 631 LMHSKIGIGYD 641



 Score =  195 bits (495), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 135/511 (26%), Positives = 236/511 (46%), Gaps = 38/511 (7%)

Query: 115 VVLEKSFI-FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA 173
           + L  +F+ F+ K+       + A R F     + +    ++ + S+++V+     + R 
Sbjct: 115 IKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRV 174

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
              +      K    L      N +I++   LG+V+  + ++R M     EP +YT+  L
Sbjct: 175 RCIFGEF---KEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFL 231

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           ++GL     ++ A  + + M+     P  V++N +I G CK G   +A +   +M  +  
Sbjct: 232 LNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNL 291

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            P+++TY TLI     +GN D  + L   M           Y  +I GL K GR V+G+ 
Sbjct: 292 EPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSS 351

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           V  +M ++    N  IY+ LI    K G   +A+ L+++M  +G +P+ V Y  +++GLC
Sbjct: 352 VFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLC 411

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           + G+ DEA E      +N  A NA  YSSL+ G  ++G+  +A + +++M +  C  +  
Sbjct: 412 KSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSY 471

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           CY+ LI  L + GK+ EA +++ +M   GC   V  Y+ +I GL      EEALKL++ M
Sbjct: 472 CYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLM 531

Query: 534 ------------------LCLEPKSQ---------------PDVFTYNILLNALCKQSNI 560
                             LCL  K                 P+   +  ++N LCK    
Sbjct: 532 IDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRT 590

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
             +  L + ++DRG +       I + AL++
Sbjct: 591 EQACKLADGIVDRGREVPGRVRTILINALRK 621



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 214/473 (45%), Gaps = 32/473 (6%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFR-EMPVRNCEPDIYTYCTLMDGLCKENRLD 244
           + + PN + F  V+K+    G  D A + F      +N    I  Y +L+D L   +  D
Sbjct: 115 IKLSPNFVAF--VLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFD 172

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV---DNMFLKGCLPNEVTYN 301
               +  E +  G   T    N LI      G LG   +L+     M   G  P+  T+N
Sbjct: 173 RVRCIFGEFKEKGFLMTVFAANSLIRSF---GALGMVEELLWVWRRMKESGIEPSLYTFN 229

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            L++GL     ++ A  + + M   K  P+ V+Y T+I G  K G           ME+R
Sbjct: 230 FLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKR 289

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               ++  Y TLI   + EG  +  + L+++M E+G +     YS +I GLC+ G+  E 
Sbjct: 290 NLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEG 349

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +   M   GC AN   Y++L+  + ++G  ++A+ +++ M       ++V Y V+++G
Sbjct: 350 SSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNG 409

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC+ G+L EA   +          + + YSS+I GL  AG V+EA K F EM  +E    
Sbjct: 410 LCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEM--VERGCP 467

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
            D + YN L++AL K   +  ++ L   M   GCD  + T  I ++              
Sbjct: 468 QDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISG------------- 514

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   LFK  R     K+ ++M+ K ++P T+++  +   LC   ++  A
Sbjct: 515 --------LFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARA 559


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  234 bits (598), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 151/451 (33%), Positives = 241/451 (53%), Gaps = 31/451 (6%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           MPV    PD YTY T++ GLC   + +EA  L+ EM  + C P  VTF   I   C+NG 
Sbjct: 1   MPV---APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 57

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           L RA +L+D M   GC P+ V Y+TLI+G   +G++D+A+ LL+ M+   C PN V Y  
Sbjct: 58  LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNA 114

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
            + GL    R  D   ++  M  +    NE  +S LIS L +    + A+++ +QM + G
Sbjct: 115 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 174

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           C+P+TV Y+ +I+ L   G+ D+A  +L  M+   C  +A  +++++KGF  + + H A 
Sbjct: 175 CEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDAS 231

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E+   M +++C   E+ +++LI  LC++G +  A  V+ QM    C PD+V YSS+++G 
Sbjct: 232 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGF 291

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
              G VE A++LF  M C     +PD+F+YN +L  LC+ +    + +L+  M+ + C P
Sbjct: 292 SEQGLVEVAIQLFRSMPC-----KPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPP 346

Query: 578 DLVTCNIFLTALKEK----------LEAPQDGTD---FLNELAIRLFKRQ-RTSGGFKIV 623
           + VT NI + +L +K           + P  G+    F     I  F  Q R     K++
Sbjct: 347 NEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLL 406

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M  K   P   ++   ++ LCR +R Q A
Sbjct: 407 STMSCK---PDAISYNSTLKGLCRAERWQDA 434



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 213/424 (50%), Gaps = 43/424 (10%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +TF   I++ C+ GL+D A+QL  +MP   C PD+  Y TL++G  ++  +D+A+ L
Sbjct: 40  PNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL 99

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+ M    C P  V +N  + GLC         +L+  M  KGC PNE T++ LI  LC 
Sbjct: 100 LNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQ 156

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM----------- 358
              +D AV +L++M    C P+ V Y  IIN L + GR  D  R+L SM           
Sbjct: 157 NNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCKPDALGFNA 216

Query: 359 -------EERKFHVNEYI--------------YSTLISGLFKEGKAEDAMKLWKQMMEKG 397
                   ER    +E I              ++ LI  L + G    A ++++QM    
Sbjct: 217 VLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYR 276

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           C P+ V YS+L++G    G  + A ++   M    C  + F+Y++++KG   + +   A 
Sbjct: 277 CTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAG 333

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E+  +M   +C  NEV +++LI+ LC+ G +  A  V  QM + G  PD+  Y+++I+G 
Sbjct: 334 ELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGF 393

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
              G +++ALKL + M C     +PD  +YN  L  LC+      + +L+  M+   C P
Sbjct: 394 SEQGRLDDALKLLSTMSC-----KPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTP 448

Query: 578 DLVT 581
           + VT
Sbjct: 449 NEVT 452



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 221/436 (50%), Gaps = 22/436 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF + I+ +  +G       +L +M R      VV+  + I  F   G    V++A+ L 
Sbjct: 44  TFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGH---VDQALDLL 100

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           +TM+    CK     +N+ L  +     +    E    +V        PN  TF+++I +
Sbjct: 101 NTML----CKPNTVCYNAALKGLCIAERWEDIGELMAEMV---RKGCSPNEATFSMLISS 153

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+  LVD+A+++  +M    CEPD   Y  +++ L +  R+D+A+ LL+ M    C P 
Sbjct: 154 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPD 210

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            + FN ++ G C+      A++L+  MF   C   E+T+N LI  LC  G ++ A  + +
Sbjct: 211 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFE 270

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +M   +C P+ VTY +++NG  + G      ++  SM  +    + + Y+ ++ GL +  
Sbjct: 271 QMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKP---DIFSYNAVLKGLCRAA 327

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + EDA +L  +M+ K C PN V ++ LI+ LC+ G  D A E+L +M N G   + FTY+
Sbjct: 328 RWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 387

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ GF E G+   A+++   M+   C  + + Y+  + GLC   + ++A  +  +ML  
Sbjct: 388 ALINGFSEQGRLDDALKLLSTMS---CKPDAISYNSTLKGLCRAERWQDAEELVAEMLRN 444

Query: 502 GCKPDVVAYSSMIHGL 517
            C P+ V +    H L
Sbjct: 445 KCTPNEVTFKYANHLL 460


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  234 bits (598), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 154/481 (32%), Positives = 234/481 (48%), Gaps = 40/481 (8%)

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           T  D F C   VK F  + +V   E +    ++  N   +    N+ PN +T+  +I   
Sbjct: 109 TFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDMND--DDGTTNLEPNLVTYTTLISAY 166

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+   +  A+ L+ EM      PD+ TY ++++GLCK   L EA  LL EM   G  P  
Sbjct: 167 CKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNH 226

Query: 263 VTFNVLINGLCKNG-------------------ELGRAAKLVDNMFLKG----------- 292
           V + +L++ L K G                   +L     L+D +F  G           
Sbjct: 227 VVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCT 286

Query: 293 -----CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                C+PN +TY  +I G C  G++D A SLL  M   + +PN VTY +IING  K G 
Sbjct: 287 LAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGM 346

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                R++  M ++    N YIY+TLI G  K GK + A+ L+ +M   G + N+ +  A
Sbjct: 347 LDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDA 406

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
            I+ L R  K +EAE +   M++ G   +   Y+SLM GFF++G+   A  + + MA+  
Sbjct: 407 FINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETG 466

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
             ++ V Y+VLI+GL   GK  +A  V++ +   G  PD   Y++MI+  C  G +E A+
Sbjct: 467 IKFDVVAYNVLINGLLRLGKY-DAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAI 525

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           KL+NEM        P+  T NIL+  L K      +ID+LN M+  G  P++      L 
Sbjct: 526 KLWNEM--KGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLN 583

Query: 588 A 588
           A
Sbjct: 584 A 584



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 150/549 (27%), Positives = 253/549 (46%), Gaps = 44/549 (8%)

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+   H   T+  +N ++      GL  +  + Y+ +++     +LPN  T N+++   C
Sbjct: 1   MIRTHHIVPTLPLWNRLIYQFNATGLVSQVWDLYSEMLSC---GVLPNVFTHNILVHAWC 57

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           ++G +  A+ L R + +   + D  TY T + G C++   ++    L  M     F    
Sbjct: 58  KMGHLSLALDLIRNVDI---DVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSF 114

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMF--------LKGCLPNEVTYNTLIHGLCLKGNLDK 315
           T N+L+ G C+ G +     ++DN+              PN VTY TLI   C +  L +
Sbjct: 115 TCNILVKGFCRIGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSE 174

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+SL + M++   +P+ VTY +IINGL K G   +   +L  M++   + N  +Y+ L+ 
Sbjct: 175 ALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVD 234

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
            LFK G A ++     QM+  G   + VV + LIDGL + GK DEAE +   +    C  
Sbjct: 235 SLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIP 294

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  TY++++ G+ + G    A  + +DM K   V N V YS +I+G  + G L  A  + 
Sbjct: 295 NNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIM 354

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKSQPDVFTYNILLNA 553
            +ML +   P+   Y+++I G   AG  + A+ L+NEM    LE  S    F  +  +N 
Sbjct: 355 KKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENS----FIVDAFINN 410

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL----------TALKEKLEAPQDGTDF- 602
           L +   +  +  L   MM +G   D V     +           A     +  + G  F 
Sbjct: 411 LKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFD 470

Query: 603 -------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  +N L +RL K    S    I E+     L+P  +T+  ++   C+  +++ AI
Sbjct: 471 VVAYNVLINGL-LRLGKYDAESVYSGIREL----GLAPDRATYNTMINAYCKQGKLENAI 525

Query: 656 NKCWSNLYG 664
            K W+ + G
Sbjct: 526 -KLWNEMKG 533



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 126/467 (26%), Positives = 226/467 (48%), Gaps = 24/467 (5%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           ++PN +T++ +I    + G++D A+++ ++M  +N  P+ Y Y TL+DG  K  + D AV
Sbjct: 327 VVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAV 386

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L +EM+++G        +  IN L +  ++  A  L   M  KG L + V Y +L+ G 
Sbjct: 387 DLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGF 446

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
              G    A ++ ++M  +    + V Y  +INGL++LG+  D   V   + E     + 
Sbjct: 447 FKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGK-YDAESVYSGIRELGLAPDR 505

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+T+I+   K+GK E+A+KLW +M      PN++  + L+ GL + G+ + A ++L E
Sbjct: 506 ATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNE 565

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M+  G   N   + +L+    +  +    +++ K +       N   Y+ LI  LC  G 
Sbjct: 566 MLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGM 625

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
            + A +V   M   G   D V Y+++IHG   +  +E+AL  + +ML       P + TY
Sbjct: 626 TKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQML--NEGVSPGIRTY 683

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           N+LL  L     +S + ++L+ M D G DPD    N  ++    K+   ++   F  E  
Sbjct: 684 NLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISG-HGKIGNKKEAIKFYCE-- 740

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                             M+ K L P+TST+  ++++  +  ++  A
Sbjct: 741 ------------------MVTKGLVPKTSTYNVLIEDFAKVGKMDQA 769



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 239/504 (47%), Gaps = 11/504 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I  Y   GD    E +L  M +++ V    ++  I   Y K  +++ A+R+   M
Sbjct: 298 TYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKM 357

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +D+ +       + ++++  ++ G    A++ YN +   K   +  N+   +  I  + R
Sbjct: 358 LDQ-NIMPNAYIYATLIDGHLKAGKQDAAVDLYNEM---KLNGLEENSFIVDAFINNLKR 413

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              ++ A  L + M  +    D   Y +LMDG  K  R   A  + ++M   G     V 
Sbjct: 414 GRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGIKFDVVA 473

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NVLINGL + G+   A  +   +   G  P+  TYNT+I+  C +G L+ A+ L + M 
Sbjct: 474 YNVLINGLLRLGKY-DAESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLWNEMK 532

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               MPN +T   ++ GL K G       VL  M       N  I+  L++   K  +A+
Sbjct: 533 GHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKCERAD 592

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
             +++ K+++  G K N  VY++LI  LC +G    A  +L  M   G +A+  TY++L+
Sbjct: 593 TILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTYNALI 652

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G F+S    KA+  +  M           Y++L+ GL   G + +A  + ++M   G  
Sbjct: 653 HGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKDSGLD 712

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKSQPDVFTYNILLNALCKQSNISH 562
           PD   Y+++I G    G+ +EA+K + EM+   L PK+     TYN+L+    K   +  
Sbjct: 713 PDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTS----TYNVLIEDFAKVGKMDQ 768

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFL 586
           + +LLN M  R   P+  T +I +
Sbjct: 769 ARELLNEMQVRRVPPNSSTYDILI 792



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 159/329 (48%), Gaps = 1/329 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + + +N++I  + RLG  D A  ++  +      PD  TY T+++  CK+ +L+ A+ L 
Sbjct: 470 DVVAYNVLINGLLRLGKYD-AESVYSGIRELGLAPDRATYNTMINAYCKQGKLENAIKLW 528

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           +EM+     P  +T N+L+ GL K GE  RA  +++ M L G  PN   +  L++     
Sbjct: 529 NEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEMLLWGICPNVTIHRALLNACSKC 588

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
              D  + +  R+V      N   Y ++I  L  LG       VL +M +     +   Y
Sbjct: 589 ERADTILQMHKRLVGMGLKANREVYNSLITVLCGLGMTKRATLVLNNMTKEGISADTVTY 648

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI G FK    E A+  + QM+ +G  P    Y+ L+ GL   G   +A EIL +M +
Sbjct: 649 NALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYNLLLGGLLAAGLMSKAYEILSKMKD 708

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +G   +A  Y++L+ G  + G   +A++ + +M     V     Y+VLI    + GK+ +
Sbjct: 709 SGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTKGLVPKTSTYNVLIEDFAKVGKMDQ 768

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           AR +  +M  R   P+   Y  +I G CN
Sbjct: 769 ARELLNEMQVRRVPPNSSTYDILICGWCN 797



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 151/292 (51%), Gaps = 3/292 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++N   ++G    A++ +N +   K  +++PN++T N+++  + + G  + AI + 
Sbjct: 507 TYNTMINAYCKQGKLENAIKLWNEM---KGHSVMPNSITCNILVGGLSKAGETERAIDVL 563

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM +    P++  +  L++   K  R D  + +   +   G       +N LI  LC  
Sbjct: 564 NEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGL 623

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G   RA  +++NM  +G   + VTYN LIHG     +++KA++   +M+     P   TY
Sbjct: 624 GMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTY 683

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             ++ GL+  G       +L  M++     +  +Y+TLISG  K G  ++A+K + +M+ 
Sbjct: 684 NLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVT 743

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           KG  P T  Y+ LI+   +VGK D+A E+L EM       N+ TY  L+ G+
Sbjct: 744 KGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGW 795


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 236/421 (56%), Gaps = 5/421 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
            N+++  +  +G   ++L F++ +V A+   +  + +++ +++  +C++G    AI+L R
Sbjct: 83  LNTLMKGLCLKGEVKKSLHFHDKVV-AQGFQM--DQVSYGILLNGLCKIGETRCAIKLLR 139

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            +  R+  PD+  Y T++DGLCK+  +DEA  L  EM   G FP  +T+  LI G C  G
Sbjct: 140 TIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAG 199

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +L  A  L++ M LK   PN  TYNTLI  LC +G + ++ +LL  M      P+ V Y 
Sbjct: 200 QLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYS 259

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +++G   +G      ++ + M +   + + Y Y+ +I+GL K  + ++AM L ++M+ K
Sbjct: 260 ILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHK 319

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
              P+TV YS+LIDGLC++G+     ++  EM + G  AN  TY+SL+ G  ++    KA
Sbjct: 320 NMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKA 379

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + ++  M +     N+  Y+ LI GLC+ G+L++ + ++  +L +G   DV  Y+ MI G
Sbjct: 380 IALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISG 439

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC  G  +EAL + ++M   +    P+  T+ I++ +L ++     +  LL+ M+ +G  
Sbjct: 440 LCKEGMFDEALAMKSKM--EDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLL 497

Query: 577 P 577
           P
Sbjct: 498 P 498



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/444 (30%), Positives = 233/444 (52%), Gaps = 17/444 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PNT+  N ++K +C  G V  ++    ++  +  + D  +Y  L++GLCK      A+ L
Sbjct: 78  PNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKL 137

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  ++     P  V ++ +I+GLCK+  +  A  L   M  +G  P+ +TY TLI G CL
Sbjct: 138 LRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCL 197

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L +A  LL+ M+     PN  TY T+I+ L K G+  +   +L  M ++    +  I
Sbjct: 198 AGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVI 257

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS L+ G    G+ + A +++  M++ G  P+   Y+ +I+GLC+  + DEA  +L EM+
Sbjct: 258 YSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREML 317

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +     +  TYSSL+ G  + G+    +++ K+M       N V Y+ L+ GLC++  L 
Sbjct: 318 HKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLD 377

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML----CLEPKSQPDVF 545
           +A  ++ +M  RG +P+   Y+++I GLC  G +++   LF  +L    C+      DV+
Sbjct: 378 KAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCI------DVW 431

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           TY ++++ LCK+     ++ + + M D GC P+ VT  I + +L EK E  +     L+E
Sbjct: 432 TYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDK-AEKLLHE 490

Query: 606 ------LAIRLFKRQRTSGGFKIV 623
                 L  R F  +R+S   K++
Sbjct: 491 MIAKGLLPFRNFHSERSSVTNKVI 514



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 217/430 (50%), Gaps = 23/430 (5%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P I  +  ++  L K       + L  +M+  G  P  VT ++LIN  C  G++  +  +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSV 67

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           +  +   G  PN +  NTL+ GLCLKG + K++   D++VA     ++V+YG ++NGL K
Sbjct: 68  LGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCK 127

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           +G      ++L ++E+R    +  +YST+I GL K+   ++A  L+ +M  +G  P+ + 
Sbjct: 128 IGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVIT 187

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ LI G C  G+  EA  +L EMI      N +TY++L+    + GK  ++  +   M 
Sbjct: 188 YTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMT 247

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           K     + V YS+L+ G C  G++++A+ ++  M+  G  PDV +Y+ +I+GLC    V+
Sbjct: 248 KKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVD 307

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA+ L  EM  L     PD  TY+ L++ LCK   I+  +DL   M  RG   +LVT N 
Sbjct: 308 EAMNLLREM--LHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNS 365

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            L  L +     +         AI LF + +  G            + P   T+  ++  
Sbjct: 366 LLDGLCKNQNLDK---------AIALFMKMKERG------------IQPNKYTYTALIDG 404

Query: 645 LCRPKRIQAA 654
           LC+  R++  
Sbjct: 405 LCKGGRLKKG 414



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 201/403 (49%), Gaps = 6/403 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P  + F  ++ ++ ++      I L ++M  +   PD+ T   L++  C   ++  +  
Sbjct: 7   IPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFS 66

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L ++   G  P  +  N L+ GLC  GE+ ++    D +  +G   ++V+Y  L++GLC
Sbjct: 67  VLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLC 126

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNE 367
             G    A+ LL  +      P+ V Y TII+GL K  + VD A  L S M  R    + 
Sbjct: 127 KIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCK-DKLVDEAYDLYSEMNARGIFPDV 185

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+TLI G    G+  +A  L  +M+ K   PN   Y+ LID LC+ GK  E++ +L  
Sbjct: 186 ITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAV 245

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M   G   +   YS LM G+   G+  KA +I+  M +     +   Y+++I+GLC+  +
Sbjct: 246 MTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR 305

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP-DVFT 546
           + EA  +  +ML +   PD V YSS+I GLC  G +   L L  EM     + QP ++ T
Sbjct: 306 VDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEM---HHRGQPANLVT 362

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           YN LL+ LCK  N+  +I L   M +RG  P+  T    +  L
Sbjct: 363 YNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 225/410 (54%), Gaps = 2/410 (0%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V +    I P+ +T+N +++ +C+   V  A Q  R M  + C PD +TY T++DG CK
Sbjct: 172 LVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCK 231

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            + L EA  LL +    G  P  VT+  LINGLC  G++ RA +L +    K   P+ V 
Sbjct: 232 RDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVV 291

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN+L+ GLC +G +  A+ +++ MV   C P+  TY  +INGL K+G   D A V+    
Sbjct: 292 YNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAI 351

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            + +  + + ++T+I G  K  K + A++L ++M   G  P+ + Y+++++GLC+ GK  
Sbjct: 352 VKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           E  E   EMI  GC  NA TY+ L++ F +  +  +A  +   M+++  V + + ++ LI
Sbjct: 412 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLI 471

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           HG C +G L  A +++ ++  +G       ++ +I    +  +++ A K+F EM  +   
Sbjct: 472 HGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEM--ISKG 529

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +PD++TY +L++  CK +N+  +   L  M+ +G  P + T    L +L
Sbjct: 530 YKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSL 579



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 251/510 (49%), Gaps = 27/510 (5%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +D F C     ++N++++ ++    + +A + Y  +++A    + P+  T  + IK+ C 
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSA---GVAPDARTHTVRIKSFCI 57

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G    A++L R +P R C+     YCT++ GL       +A  L DEM     FP   T
Sbjct: 58  TGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVAT 117

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN +++ LC+ G++  +  L+  +  +G   N+ T N  I GLC  G L++AV+L++ M 
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMD 177

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A    P+ VTY T++ GL K  +  + A+ L  M  +    +++ Y+T+I G  K    +
Sbjct: 178 AY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +L K  + KG  P+ V Y +LI+GLC  G  + A E+  E        +   Y+SL+
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           KG    G    A+++  +M ++ C  +   Y+++I+GLC+ G + +A +V    + +G  
Sbjct: 297 KGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PDV  +++MI G C    ++ AL+L   M        PD  TYN +LN LCK        
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERMWMY--GIAPDAITYNSVLNGLCKAGKAKEVN 414

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
           +    M+ +GC P+ +T NI +    +           +N+L       +  SG   ++ 
Sbjct: 415 ETFEEMILKGCRPNAITYNILIENFCK-----------INQL-------EEASG---VIV 453

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            M Q  L P T ++  ++   CR   +  A
Sbjct: 454 RMSQDGLVPDTISFNTLIHGFCRNGDLDGA 483



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/506 (26%), Positives = 251/506 (49%), Gaps = 26/506 (5%)

Query: 172 RALEFYNHIVNAKHM-------NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
           R L  + H  +A+H+       ++ P+  TFN V+  +C+ G +  +  L  ++  R   
Sbjct: 88  RGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMS 147

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
            + +T    + GLC+  RL+EAV L++ M      P  VT+N L+ GLCK+ ++  AA+ 
Sbjct: 148 VNKFTCNIWIRGLCEGGRLEEAVALVESMDA-YIAPDVVTYNTLMRGLCKDSKVQEAAQY 206

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           +  M  +GC+P++ TYNT+I G C +  L +A  LL   +    +P+ VTY ++INGL  
Sbjct: 207 LRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCA 266

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G       +    + +    +  +Y++L+ GL ++G    A+++  +M+E GC P+   
Sbjct: 267 EGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWT 326

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ +I+GLC++G   +A  ++ + I  G   + FT+++++ G+ +  K   A+++ + M 
Sbjct: 327 YNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMW 386

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
                 + + Y+ +++GLC+ GK +E    + +M+ +GC+P+ + Y+ +I   C    +E
Sbjct: 387 MYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLE 446

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA  +   M   +    PD  ++N L++  C+  ++  +  L   + ++G      T NI
Sbjct: 447 EASGVIVRMS--QDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 504

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFK------RQRTSGGFKIVEV---------MLQK 629
            + A   KL   Q       E+  + +K      R    G  K   V         M+ K
Sbjct: 505 LIGAYSSKLNM-QMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSK 563

Query: 630 FLSPQTSTWERVVQELCRPKRIQAAI 655
              P  +T+ RV+  L    R+  A+
Sbjct: 564 GFVPSMATFGRVLNSLAMNHRVSEAV 589



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 243/464 (52%), Gaps = 43/464 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA +    M+++  C     ++N++++   +  +   A E    + +A     +P+ +
Sbjct: 200 VQEAAQYLRRMMNQ-GCIPDDFTYNTIIDGYCKRDMLQEATEL---LKDAIFKGFVPDRV 255

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  +I  +C  G V+ A++LF E   ++ +PD+  Y +L+ GLC++  +  A+ +++EM
Sbjct: 256 TYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 315

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             DGC P   T+N++INGLCK G +  AA ++++  +KG LP+  T+NT+I G C +  L
Sbjct: 316 VEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKL 375

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A+ L++RM      P+ +TY +++NGL K                             
Sbjct: 376 DSALQLVERMWMYGIAPDAITYNSVLNGLCK----------------------------- 406

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
                  GKA++  + +++M+ KGC+PN + Y+ LI+  C++ + +EA  ++  M  +G 
Sbjct: 407 ------AGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGL 460

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  ++++L+ GF  +G    A  +++ + +         +++LI        ++ A  
Sbjct: 461 VPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEK 520

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M+S+G KPD+  Y  ++ G C A +V+ A     EM  +     P + T+  +LN+
Sbjct: 521 IFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEM--VSKGFVPSMATFGRVLNS 578

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
           L     +S ++ +++ M+  G  P++V  +  L+  K+++ AP+
Sbjct: 579 LAMNHRVSEAVAIIHIMVRMGVVPEVV--DTILSTDKKEIAAPK 620


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 263/528 (49%), Gaps = 24/528 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+  F+ M+   H   ++  F  +L  I +   Y   L   + +       I PN  
Sbjct: 40  LDDALSSFNRML-HMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM---DSFGIPPNIY 95

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I + C L  +  A  +  ++     +P+I T+ TL+ GLC E ++ E + L D+M
Sbjct: 96  TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 155

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  LINGLCK G    A +L+ +M    C P+ V Y ++I  LC    +
Sbjct: 156 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 215

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +L   M+     P+  TY ++I+ L  L        +L  M   K   N  I+ST+
Sbjct: 216 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 275

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEGK  +A  +   M+++G +PN V Y+AL+DG C   + DEA ++   M+  G 
Sbjct: 276 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 335

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A +  +YS+L+ G+ +  +  KA+ ++++M +   + N V YS L+HGLC  G+L++A  
Sbjct: 336 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA 395

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M++RG  PD V+Y  ++  LC    ++EA+ L   +        PD+  Y I+++ 
Sbjct: 396 LFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI--EGSNMDPDIQIYTIVIDG 453

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL----------------KEKLEAPQ 597
           +C+   +  + DL +++  +G  P++ T  I +  L                K K  +P 
Sbjct: 454 MCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 513

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
             T   N +     +   T  G ++++ ML +  S   ST   +V+ L
Sbjct: 514 GCT--YNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 559



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 231/448 (51%), Gaps = 11/448 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + +FN+++  +  EG     L  ++ ++        PN +T+  +I  +C++G    AI+
Sbjct: 129 IATFNTLIRGLCVEGKIGEVLHLFDKMIGE---GFQPNVVTYGTLINGLCKVGSTSAAIR 185

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L R M   NC+PD+  Y +++D LCK+ ++ +A  L  EM   G  P+  T+N LI+ LC
Sbjct: 186 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALC 245

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
              E      L++ M     +PN V ++T++  LC +G + +A  ++D M+     PN V
Sbjct: 246 NLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVV 305

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +++G        +  +V  +M  + F  +   YSTLI+G  K  + E AM L+++M
Sbjct: 306 TYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM 365

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             K   PNTV YS L+ GLC VG+  +A  +  EM+  G   +  +Y  L+    ++ + 
Sbjct: 366 CRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRL 425

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ + K +  +N   +   Y+++I G+C  G+L  AR +++ + S+G  P+V  Y+ M
Sbjct: 426 DEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIM 485

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I+GLC  G + EA KLF EM        P+  TYN++     + +     I LL  M+ R
Sbjct: 486 INGLCQQGLLAEASKLFGEM--KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLAR 543

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           G   D+ T  + +  L +      DG D
Sbjct: 544 GFSADVSTSTVLVEMLSD------DGLD 565



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 195/376 (51%), Gaps = 4/376 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  +  K   V +A  LF  M+ +     ++ ++NS+++ +     +       N +VN+
Sbjct: 205 IIDSLCKDRQVTQAFNLFSEMIHQ-GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 263

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I+PN + F+ V+  +C+ G V  A  +   M  R  EP++ TY  LMDG C  + +
Sbjct: 264 K---IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 320

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEAV + D M   G  P  V+++ LING CK   + +A  L + M  K  +PN VTY+TL
Sbjct: 321 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +HGLC  G L  A++L   MV    +P+ V+Y  +++ L K  R  +   +L ++E    
Sbjct: 381 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 440

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +  IY+ +I G+ + G+ E A  L+  +  KG  PN   Y+ +I+GLC+ G   EA +
Sbjct: 441 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 500

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EM   G + N  TY+ + +GF  + +  + +++ ++M       +    +VL+  L 
Sbjct: 501 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLS 560

Query: 484 EDGKLREARMVWTQML 499
           +DG  +  + + ++ L
Sbjct: 561 DDGLDQSVKQILSEFL 576



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 229/470 (48%), Gaps = 5/470 (1%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           F+  +     KLG +Q   +TF +LI+     G    +  +  +M  E       ++  +
Sbjct: 112 FAFSVLAKILKLG-HQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTL 170

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
                K      AIRL  +M ++ +C+  V  + S+++ + ++    +A   ++ ++   
Sbjct: 171 INGLCKVGSTSAAIRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI--- 226

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
           H  I P+  T+N +I  +C L    +   L  EM      P++  + T++D LCKE ++ 
Sbjct: 227 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 286

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  ++D M   G  P  VT+N L++G C   E+  A K+ D M  KG  P+ V+Y+TLI
Sbjct: 287 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 346

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +G C    ++KA+ L + M   + +PN VTY T+++GL  +GR  D   +   M  R   
Sbjct: 347 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 406

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y  L+  L K  + ++A+ L K +      P+  +Y+ +IDG+CR G+ + A ++
Sbjct: 407 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 466

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              + + G   N +TY+ ++ G  + G   +A +++ +M +     N   Y+++  G   
Sbjct: 467 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 526

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           + +      +  +ML+RG   DV   + ++  L + G  +   ++ +E L
Sbjct: 527 NNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 576



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 172/360 (47%), Gaps = 22/360 (6%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A+S  +RM+     P+   +  ++  + K+        +   M+      N Y  + 
Sbjct: 40  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI+      +   A  +  ++++ G +PN   ++ LI GLC  GK  E   +  +MI  G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  TY +L+ G  + G    A+ + + M + NC  + V Y+ +I  LC+D ++ +A 
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++++M+ +G  P +  Y+S+IH LCN    +    L NEM+    K  P+V  ++ +++
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV--NSKIMPNVVIFSTVVD 277

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIRL 610
           ALCK+  +  + D+++ M+ RG +P++VT N  +    L+ +++   +     + +  + 
Sbjct: 278 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD---EAVKVFDTMVCKG 334

Query: 611 F---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           F               K QR      + E M +K L P T T+  ++  LC   R+Q AI
Sbjct: 335 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 394



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 138/265 (52%), Gaps = 10/265 (3%)

Query: 134 VEEAIRLFHTMVDEFHCK---RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
           ++EA+++F TMV    CK     V S+++++N   +     +A+  +  +   +   ++P
Sbjct: 320 MDEAVKVFDTMV----CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE---LIP 372

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT+T++ ++  +C +G + +AI LF EM  R   PD  +YC L+D LCK  RLDEA+ LL
Sbjct: 373 NTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALL 432

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             ++     P    + ++I+G+C+ GEL  A  L  N+  KG  PN  TY  +I+GLC +
Sbjct: 433 KAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQ 492

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G L +A  L   M      PN  TY  I  G ++    + G ++L  M  R F  +    
Sbjct: 493 GLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTS 552

Query: 371 STLISGLFKEGKAEDAMKLWKQMME 395
           + L+  L  +G  +   ++  + ++
Sbjct: 553 TVLVEMLSDDGLDQSVKQILSEFLQ 577


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 149/528 (28%), Positives = 263/528 (49%), Gaps = 24/528 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+  F+ M+   H   ++  F  +L  I +   Y   L   + +       I PN  
Sbjct: 49  LDDALSSFNRML-HMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM---DSFGIPPNIY 104

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I + C L  +  A  +  ++     +P+I T+ TL+ GLC E ++ E + L D+M
Sbjct: 105 TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 164

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  LINGLCK G    A +L+ +M    C P+ V Y ++I  LC    +
Sbjct: 165 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 224

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +L   M+     P+  TY ++I+ L  L        +L  M   K   N  I+ST+
Sbjct: 225 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 284

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEGK  +A  +   M+++G +PN V Y+AL+DG C   + DEA ++   M+  G 
Sbjct: 285 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 344

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A +  +YS+L+ G+ +  +  KA+ ++++M +   + N V YS L+HGLC  G+L++A  
Sbjct: 345 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA 404

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M++RG  PD V+Y  ++  LC    ++EA+ L   +        PD+  Y I+++ 
Sbjct: 405 LFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAI--EGSNMDPDIQIYTIVIDG 462

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL----------------KEKLEAPQ 597
           +C+   +  + DL +++  +G  P++ T  I +  L                K K  +P 
Sbjct: 463 MCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPN 522

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
             T   N +     +   T  G ++++ ML +  S   ST   +V+ L
Sbjct: 523 GCT--YNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEML 568



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 231/448 (51%), Gaps = 11/448 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + +FN+++  +  EG     L  ++ ++        PN +T+  +I  +C++G    AI+
Sbjct: 138 IATFNTLIRGLCVEGKIGEVLHLFDKMIGE---GFQPNVVTYGTLINGLCKVGSTSAAIR 194

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L R M   NC+PD+  Y +++D LCK+ ++ +A  L  EM   G  P+  T+N LI+ LC
Sbjct: 195 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALC 254

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
              E      L++ M     +PN V ++T++  LC +G + +A  ++D M+     PN V
Sbjct: 255 NLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVV 314

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +++G        +  +V  +M  + F  +   YSTLI+G  K  + E AM L+++M
Sbjct: 315 TYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM 374

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             K   PNTV YS L+ GLC VG+  +A  +  EM+  G   +  +Y  L+    ++ + 
Sbjct: 375 CRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRL 434

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ + K +  +N   +   Y+++I G+C  G+L  AR +++ + S+G  P+V  Y+ M
Sbjct: 435 DEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIM 494

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I+GLC  G + EA KLF EM        P+  TYN++     + +     I LL  M+ R
Sbjct: 495 INGLCQQGLLAEASKLFGEM--KRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLAR 552

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           G   D+ T  + +  L +      DG D
Sbjct: 553 GFSADVSTSTVLVEMLSD------DGLD 574



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 195/376 (51%), Gaps = 4/376 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  +  K   V +A  LF  M+ +     ++ ++NS+++ +     +       N +VN+
Sbjct: 214 IIDSLCKDRQVTQAFNLFSEMIHQ-GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS 272

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I+PN + F+ V+  +C+ G V  A  +   M  R  EP++ TY  LMDG C  + +
Sbjct: 273 K---IMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 329

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEAV + D M   G  P  V+++ LING CK   + +A  L + M  K  +PN VTY+TL
Sbjct: 330 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +HGLC  G L  A++L   MV    +P+ V+Y  +++ L K  R  +   +L ++E    
Sbjct: 390 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 449

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +  IY+ +I G+ + G+ E A  L+  +  KG  PN   Y+ +I+GLC+ G   EA +
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 509

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EM   G + N  TY+ + +GF  + +  + +++ ++M       +    +VL+  L 
Sbjct: 510 LFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLS 569

Query: 484 EDGKLREARMVWTQML 499
           +DG  +  + + ++ L
Sbjct: 570 DDGLDQSVKQILSEFL 585



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 229/470 (48%), Gaps = 5/470 (1%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           F+  +     KLG +Q   +TF +LI+     G    +  +  +M  E       ++  +
Sbjct: 121 FAFSVLAKILKLG-HQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTL 179

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
                K      AIRL  +M ++ +C+  V  + S+++ + ++    +A   ++ ++   
Sbjct: 180 INGLCKVGSTSAAIRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMI--- 235

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
           H  I P+  T+N +I  +C L    +   L  EM      P++  + T++D LCKE ++ 
Sbjct: 236 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVM 295

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  ++D M   G  P  VT+N L++G C   E+  A K+ D M  KG  P+ V+Y+TLI
Sbjct: 296 EAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLI 355

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +G C    ++KA+ L + M   + +PN VTY T+++GL  +GR  D   +   M  R   
Sbjct: 356 NGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQI 415

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y  L+  L K  + ++A+ L K +      P+  +Y+ +IDG+CR G+ + A ++
Sbjct: 416 PDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 475

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              + + G   N +TY+ ++ G  + G   +A +++ +M +     N   Y+++  G   
Sbjct: 476 FSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLR 535

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           + +      +  +ML+RG   DV   + ++  L + G  +   ++ +E L
Sbjct: 536 NNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 172/360 (47%), Gaps = 22/360 (6%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A+S  +RM+     P+   +  ++  + K+        +   M+      N Y  + 
Sbjct: 49  LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI+      +   A  +  ++++ G +PN   ++ LI GLC  GK  E   +  +MI  G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  TY +L+ G  + G    A+ + + M + NC  + V Y+ +I  LC+D ++ +A 
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++++M+ +G  P +  Y+S+IH LCN    +    L NEM+    K  P+V  ++ +++
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMV--NSKIMPNVVIFSTVVD 286

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIRL 610
           ALCK+  +  + D+++ M+ RG +P++VT N  +    L+ +++   +     + +  + 
Sbjct: 287 ALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMD---EAVKVFDTMVCKG 343

Query: 611 F---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           F               K QR      + E M +K L P T T+  ++  LC   R+Q AI
Sbjct: 344 FAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAI 403



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 138/265 (52%), Gaps = 10/265 (3%)

Query: 134 VEEAIRLFHTMVDEFHCK---RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
           ++EA+++F TMV    CK     V S+++++N   +     +A+  +  +   +   ++P
Sbjct: 329 MDEAVKVFDTMV----CKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKE---LIP 381

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT+T++ ++  +C +G + +AI LF EM  R   PD  +YC L+D LCK  RLDEA+ LL
Sbjct: 382 NTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALL 441

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             ++     P    + ++I+G+C+ GEL  A  L  N+  KG  PN  TY  +I+GLC +
Sbjct: 442 KAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQ 501

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G L +A  L   M      PN  TY  I  G ++    + G ++L  M  R F  +    
Sbjct: 502 GLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTS 561

Query: 371 STLISGLFKEGKAEDAMKLWKQMME 395
           + L+  L  +G  +   ++  + ++
Sbjct: 562 TVLVEMLSDDGLDQSVKQILSEFLQ 586


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/472 (30%), Positives = 242/472 (51%), Gaps = 21/472 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T  FN ++  + + G +    QLF  M   +  P++ TY  L+ GLCK  R+ +A+ +
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 250 LDEM---QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF--LKGCLPNEVTYNTLI 304
           LD M   + D C P  V  N +++GLCK G L +A K V+     + GC PN VTYN L 
Sbjct: 195 LDGMSGPESDVC-PDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLA 253

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER--- 361
           H  C  GN+  A  L+ +M   +  PN VT  TI+ GL  +GR   GA +    E+R   
Sbjct: 254 HAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRV--GAALEFFREKRTVW 311

Query: 362 -KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
            +   N   YSTL+           AM+L+ +M+++G  P+ ++Y  +I GL + G+ D+
Sbjct: 312 PEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDD 371

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  +   M   G   +A  Y+ L+ GF    + ++A E+  +M +     +   Y+ L+ 
Sbjct: 372 AWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLS 431

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           GLC+ G       +  +M+  GC+P VV + ++IHG C  G ++EAL++F  M   E   
Sbjct: 432 GLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMD--ESGI 489

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           QP+   YN L++ LCK  + S +I+L + M ++    ++ T N  L  L++K   P+   
Sbjct: 490 QPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDK-NMPEKAF 548

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKF-LSPQTSTWERVVQELCRPKRI 651
           + ++     L +  R +  +  ++++++   +  +T   +  +Q    PKR+
Sbjct: 549 ELMD-----LMREGRCTPDYVTIDILMEWLPVIGETDRLKHFMQHDTTPKRM 595



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 217/442 (49%), Gaps = 46/442 (10%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
             +FN++L+ + Q G      + +  + +A   ++ PN +T+ +++K +C+ G V +A+ 
Sbjct: 137 TSAFNTLLDALAQAGDLPGMTQLFASMRDA---SVRPNVVTYGILVKGLCKAGRVGDALS 193

Query: 214 LFREM--PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM--QVDGCFPTPVTFNVLI 269
           +   M  P  +  PD+     ++DGLCK  RL +AV  ++E    V GC P  VT+N L 
Sbjct: 194 VLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLA 253

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG------------------ 311
           +  C+ G +G A +LV  M  +   PN VT NT++ GLC  G                  
Sbjct: 254 HAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPE 313

Query: 312 -------------------NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
                              N+  A+ L   MV     P+ + Y T+I+GL + GR  D  
Sbjct: 314 ARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAW 373

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +  SM++  F ++   Y+ LI G  +  +  +A +L  +M E G +P+   Y+ L+ GL
Sbjct: 374 SMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGL 433

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G     +E+L +MI+ GC  +  T+ +L+ G+ + G+  +A+ I++ M ++    N 
Sbjct: 434 CKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNT 493

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LI  LC+      A  ++ +M  +    +V  +++++ GL +    E+A +L + 
Sbjct: 494 VIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDL 553

Query: 533 MLCLEPKSQPDVFTYNILLNAL 554
           M   E +  PD  T +IL+  L
Sbjct: 554 M--REGRCTPDYVTIDILMEWL 573



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 192/421 (45%), Gaps = 35/421 (8%)

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A  L D +      P    FN L++ L + G+L    +L  +M      PN VTY  L
Sbjct: 119 DAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGIL 178

Query: 304 IHGLCLKGNLDKAVSLLDRMVA--SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           + GLC  G +  A+S+LD M    S   P+ V    I++GL K GR     + +   EER
Sbjct: 179 VKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFV---EER 235

Query: 362 KFHV-----NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
              V     N   Y+ L     + G    A +L  +M ++   PN V  + ++ GLC VG
Sbjct: 236 MRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVG 295

Query: 417 KPDEAEEILFE--MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +   A E   E   +      NA TYS+L+  F  +     A+E++ +M       + + 
Sbjct: 296 RVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIM 355

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y  +I GL + G+L +A  + T M   G + D  AY+ +I G C    + EA +L  EM 
Sbjct: 356 YFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMK 415

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
             E   QPDV+TYN LL+ LCK  +     +LL  M+D GC P +VT   F T +    +
Sbjct: 416 --EAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVT---FGTLIHGYCK 470

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             Q     ++E A+R+F+    SG            + P T  +  ++  LC+ +    A
Sbjct: 471 VGQ-----IDE-ALRIFRSMDESG------------IQPNTVIYNTLIDFLCKSRDTSLA 512

Query: 655 I 655
           I
Sbjct: 513 I 513



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 205/473 (43%), Gaps = 46/473 (9%)

Query: 49  KQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYR 108
           K +   P  +A + +   D +    P   +     S F +L+   A +GD   +  +   
Sbjct: 108 KILSRSPSSSADAARFLRDSLAAGAPPPDT-----SAFNTLLDALAQAGDLPGMTQLFAS 162

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVD-EFHCKRTVKSFNSVLNVIIQE 167
           MR         ++  + K   KA  V +A+ +   M   E      V   N++++ + + 
Sbjct: 163 MRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKT 222

Query: 168 GLYHRALEF-----------------YNHIVNA-----------------KHMNILPNTL 193
           G   +A++F                 YN + +A                 +   + PN +
Sbjct: 223 GRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAV 282

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI----YTYCTLMDGLCKENRLDEAVLL 249
           T N ++  +C +G V  A++ FRE   R   P+      TY TL+      N +  A+ L
Sbjct: 283 TLNTIVGGLCWVGRVGAALEFFREK--RTVWPEARGNAVTYSTLVGAFLHTNNVGVAMEL 340

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM  +G  P  + +  +I+GL + G L  A  +  +M   G   +   YN LI G C 
Sbjct: 341 FHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCR 400

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +  L++A  LL  M  +   P+  TY T+++GL K G  +    +L  M +     +   
Sbjct: 401 RKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVT 460

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           + TLI G  K G+ ++A+++++ M E G +PNTV+Y+ LID LC+      A E+  EM 
Sbjct: 461 FGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMR 520

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
                AN  T+++L+KG  +     KA E+   M +  C  + V   +L+  L
Sbjct: 521 EKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWL 573



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 136/286 (47%), Gaps = 11/286 (3%)

Query: 148 FHCKRTV--------KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           F  KRTV         ++++++   +       A+E ++ +V+  +    P+ + +  +I
Sbjct: 304 FREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNS---PDAIMYFTMI 360

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             + + G +D+A  +   M     + D   Y  L+ G C+  RL+EA  LL EM+  G  
Sbjct: 361 SGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQ 420

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   T+N L++GLCK G+     +L+  M   GC P+ VT+ TLIHG C  G +D+A+ +
Sbjct: 421 PDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRI 480

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              M  S   PN V Y T+I+ L K         +   M E+    N   ++ L+ GL  
Sbjct: 481 FRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRD 540

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   E A +L   M E  C P+ V    L++ L  +G+ D  +  +
Sbjct: 541 KNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDRLKHFM 586



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 106/230 (46%), Gaps = 4/230 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           ++++I     +G       +   M++    +  K++  +   + +   + EA  L   M 
Sbjct: 356 YFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEM- 414

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E   +  V ++N++L+ + + G +    E    +++       P+ +TF  +I   C++
Sbjct: 415 KEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDG---GCRPSVVTFGTLIHGYCKV 471

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G +D A+++FR M     +P+   Y TL+D LCK      A+ L DEM+         TF
Sbjct: 472 GQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTF 531

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
           N L+ GL       +A +L+D M    C P+ VT + L+  L + G  D+
Sbjct: 532 NALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGETDR 581


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 156/526 (29%), Positives = 256/526 (48%), Gaps = 11/526 (2%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKR-VVLEKSFIFIFK 126
           + F    +  +Y+   ST+ +LI+       +  +  ++  M R    VV       I +
Sbjct: 104 QFFRWAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIR 163

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             G A ++ +A+ +F+  +    C+ T  ++NS++ +++ EG Y +  E YN + N    
Sbjct: 164 MLGNAKMISKAVAIFYQ-IKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQ- 221

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
              P+T+T++ +I   C+LG  D+AI L  EM     +P    Y  LM  L K + +  A
Sbjct: 222 -CFPDTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGA 280

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L +EM+   C P   T+  LI GL K G L  A      M  +GC P+ V  N +I+ 
Sbjct: 281 LGLFEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINF 340

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHV 365
           L   G LD A+ L + M   +C+P+ VTY TII  L +   R  + +     M+      
Sbjct: 341 LGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISP 400

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS LI G  K  + E AM L ++M EKG  P    Y +LID L +  + D A E+ 
Sbjct: 401 SPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELF 460

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+  N  +++A  Y+ ++K   ++G+   AV+++ +M +  C  N   Y+ L+ GL   
Sbjct: 461 QELKENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARA 520

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--QPD 543
           G L EA     +M   GC PD+ +Y+ +++ L   G  + A+     MLC   +S  +PD
Sbjct: 521 GMLDEALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMG----MLCNMKQSAIKPD 576

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             +YN +L AL        +  L+  M   G D DL+T +  L A+
Sbjct: 577 AVSYNTVLGALSHAGMFEEAAKLMKEMNAIGFDYDLITYSSILEAI 622



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 160/337 (47%), Gaps = 11/337 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE----KRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           T+  LI+    +G         + MRRE      V++     F+    GKA  +++AI+L
Sbjct: 298 TYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFL----GKAGRLDDAIKL 353

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M +   C  +V ++N+++  + +     R  E  +     K   I P+  T++++I 
Sbjct: 354 FEEM-ETLRCIPSVVTYNTIIKALFESK--SRVSEISSWFERMKGSGISPSPFTYSILID 410

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C+    + A+ L  EM  +   P    YC+L+D L K  R D A  L  E++ +    
Sbjct: 411 GFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSS 470

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +   + V+I  L K G L  A  L D M   GC PN   YN L+ GL   G LD+A++ +
Sbjct: 471 SARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTM 530

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            RM    C+P+  +Y  I+N L K G       +L +M++     +   Y+T++  L   
Sbjct: 531 RRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHA 590

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           G  E+A KL K+M   G   + + YS++++ + +V +
Sbjct: 591 GMFEEAAKLMKEMNAIGFDYDLITYSSILEAIGKVDQ 627



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 148/359 (41%), Gaps = 59/359 (16%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           TY  LI  L +     +   ++  MV +  C+   +    II  L           +   
Sbjct: 121 TYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQ 180

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLCRVG 416
           ++ RK     + Y+++I  L  EG+ E   +L+ +M  +G C P+TV YSALI   C++G
Sbjct: 181 IKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLG 240

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + D A  +L EM +NG    A  Y+ LM   F+    H A+                   
Sbjct: 241 RQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGAL------------------- 281

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
               GL E            +M  + C+PDV  Y+ +I GL  AG ++EA   F+EM   
Sbjct: 282 ----GLFE------------EMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMR-- 323

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
               +PD    N ++N L K   +  +I L   M    C P +VT N  + AL E     
Sbjct: 324 REGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRV 383

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            + + +        F+R + SG            +SP   T+  ++   C+  R + A+
Sbjct: 384 SEISSW--------FERMKGSG------------ISPSPFTYSILIDGFCKTNRTEKAM 422


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 245/460 (53%), Gaps = 7/460 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA+ ++EA+ LF    ++    R V    +   +I+  G   +  E Y  +   K    +
Sbjct: 67  KANRLDEAVELF----EQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSI 122

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ + +N ++  + +   V+ A+++F EM  R+  P++ TY  L+D LC+E +L+ A+ +
Sbjct: 123 PSVIAYNCILTCLGKKRRVEEALRIFEEMK-RDAVPNVPTYNILIDMLCREGKLNAALEI 181

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M+  G FP  +T N++I+ LCK  +L  A  + + M  K C PN VT+++LI GL  
Sbjct: 182 RDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGK 241

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +D A SL ++M+    +P  + Y ++I    K GR  DG ++   M       +  +
Sbjct: 242 CGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTL 301

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            +T +  +FK G+ E    L++++   G  P+   YS LI GL + G  +E  E+ + M 
Sbjct: 302 INTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMK 361

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             GC  +   Y++++ GF +SGK +KA ++ ++M         V Y  +I GL +  +L 
Sbjct: 362 EQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLD 421

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA M++ +  S G K +VV YSS+I G    G ++EA  +  E+  ++    P+V+T+N 
Sbjct: 422 EAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEEL--MQKGLTPNVYTWNC 479

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           LL+AL K   I+ ++    SM D  C P+ +T +I +  L
Sbjct: 480 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGL 519



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 258/540 (47%), Gaps = 42/540 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F     +L R + +  +    ++  I    GK   VEEA+R+F  M
Sbjct: 92  AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 151

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V ++N +++++ +EG  + ALE  + +  A    + PN LT N++I  +C+
Sbjct: 152 KRD--AVPNVPTYNILIDMLCREGKLNAALEIRDDMERA---GLFPNVLTVNIMIDRLCK 206

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              ++ A  +F  M  + C P+  T+ +L+DGL K  R+D+A  L ++M   G  P  + 
Sbjct: 207 AQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIV 266

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI    K G      K+   M   GC P+    NT +  +   G  +K  +L   + 
Sbjct: 267 YTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREIN 326

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A   +P+  +Y  +I+GLVK G A +   +  +M+E+   ++ + Y+ +I G  K GK  
Sbjct: 327 AHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVN 386

Query: 385 DAMKLWKQMMEKGCKP-----------------------------------NTVVYSALI 409
            A +L ++M  KG  P                                   N VVYS+LI
Sbjct: 387 KAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLI 446

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  I+ E++  G   N +T++ L+    ++ + ++A+  ++ M    C 
Sbjct: 447 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCP 506

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N++ YS+LI+GLC   K  +A + W +M   G KP+ + Y++MI GL  AG++ EA  L
Sbjct: 507 PNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGL 566

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+          PD  +YN ++  L   +    +  L      +GC+    TC + L AL
Sbjct: 567 FSRFKA--NGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDAL 624



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 198/432 (45%), Gaps = 39/432 (9%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +EEA  +F  M D+  C     +F+S+++ + + G    A   Y  +++  H   +
Sbjct: 206 KAQKLEEACSIFEGMDDKV-CTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH---V 261

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  + +  +I++  + G  ++  ++++EM    C PD+    T MD + K    ++   L
Sbjct: 262 PGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRAL 321

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             E+   G  P   ++++LI+GL K G      +L   M  +GC+ +   YN +I G C 
Sbjct: 322 FREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCK 381

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G ++KA  LL+ M      P  VTYG++I+GL K+ R  +   +    +     +N  +
Sbjct: 382 SGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVV 441

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKG-------------------------------- 397
           YS+LI G  K G+ ++A  + +++M+KG                                
Sbjct: 442 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMK 501

Query: 398 ---CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
              C PN + YS LI+GLCRV K ++A     EM   G   N  TY++++ G  ++G   
Sbjct: 502 DLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNIL 561

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A  ++     N  + +   Y+ +I GL    K  +A  ++ +   +GC         ++
Sbjct: 562 EASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLL 621

Query: 515 HGLCNAGSVEEA 526
             L  A  +E+A
Sbjct: 622 DALHKAECLEQA 633



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 197/411 (47%), Gaps = 6/411 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF SLI      G       +  +M     V     +  + +++ K    E+  +++  M
Sbjct: 231 TFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEM 290

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V    C   +   N+ ++ + + G   +    +  I NA     +P+  +++++I  + +
Sbjct: 291 VHT-GCSPDLTLINTYMDCVFKAGETEKGRALFREI-NAH--GFIPDARSYSILIHGLVK 346

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GL +   +LF  M  + C  D + Y  ++DG CK  ++++A  LL+EM+V G  PT VT
Sbjct: 347 AGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVT 406

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +I+GL K   L  A  L +     G   N V Y++LI G    G +D+A  +++ ++
Sbjct: 407 YGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELM 466

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PN  T+  +++ LVK     +      SM++ K   N+  YS LI+GL +  K  
Sbjct: 467 QKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFN 526

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A   W++M + G KPNT+ Y+ +I GL + G   EA  +      NG   ++ +Y++++
Sbjct: 527 KAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMI 586

Query: 445 KGFFESGKGHKAVEIWKDMAKNNC-VYNEVCYSVLIHGLCEDGKLREARMV 494
           +G   + K   A  ++++     C ++ + C  VL+  L +   L +A +V
Sbjct: 587 EGLSSANKAMDAYALFEETRLKGCNIHTKTCV-VLLDALHKAECLEQAAIV 636


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 166/597 (27%), Positives = 283/597 (47%), Gaps = 52/597 (8%)

Query: 23  KTLSLTTIPSERSHRFFSV-----RSAVSSNKQM-ETEPQGNAKSEQP-FSDEIFNSTPK 75
           K+L ++ I S+R H    +     R     +K++ +T      + +QP  + +IFN   +
Sbjct: 109 KSLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKR 168

Query: 76  LGSYQ---LGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH 132
           L +Y+   L  +T  + +  Y +S        VL    +   V    SF  +   Y    
Sbjct: 169 L-NYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLES 227

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
            V++A+   + M  EF C     S+N++L+ +++  L   A +    +++ K   + PN 
Sbjct: 228 KVKDALDWVNKM-SEFGCVPDTVSYNTILDALLKRRLLQEARDL---LLDMKSKGLSPNK 283

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
            T+N+++   CRLGL+  A ++   M   N  P ++TY  L++G C + ++DEA  + DE
Sbjct: 284 HTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDE 343

Query: 253 MQVDGCFPTPVTFNVLING-----------------------------------LCKNGE 277
           M+     P  VT+N LI+G                                   +CK G 
Sbjct: 344 MEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGN 403

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +  A   +D M   G  P+ VTYNTLI   C  G + KA  ++D M +     +  T  T
Sbjct: 404 MTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNT 463

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           I++ L    +  +   +L S  +R + ++E  Y  LI G FK+ K + A+ LW +M E+ 
Sbjct: 464 ILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQ 523

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P+T+ Y+++I GLC+  K D+A + L EM+ NG   +  TY+ ++ GF   G   KA 
Sbjct: 524 IMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAF 583

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           +   +M +N    +    ++L+ GLC +G L +A  ++  ++S+G   DVV Y+++I  L
Sbjct: 584 QFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSL 643

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           C  G  E A  L  EM     K  PD +TY +++ AL     I  + +    M++ G
Sbjct: 644 CKEGKFENAYDLLTEMEA--KKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESG 698



 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 244/504 (48%), Gaps = 58/504 (11%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + ++PNT +FN++I   C    V +A+    +M    C PD  +Y T++D L K   L E
Sbjct: 207 LGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQE 266

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  LL +M+  G  P   T+N+L+ G C+ G L  A K+++ M     LP   TYN L++
Sbjct: 267 ARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVN 326

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C  G +D+A  + D M     +P+ VTY T+I+G  +   + +   ++  M+++    
Sbjct: 327 GFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKC 386

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y+ ++  + K+G   +A     +M E G  P+ V Y+ LI   C+ GK  +A  ++
Sbjct: 387 NAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMM 446

Query: 426 FEMINNG----------------------------CAA-------NAFTYSSLMKGFFES 450
            EM + G                            C+A       +  +Y  L+ G+F+ 
Sbjct: 447 DEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKD 506

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            KG +A+ +W +M +   + + + Y+ +I GLC+  K+ +A     +ML  G  PD   Y
Sbjct: 507 EKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTY 566

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + +IHG C  G+VE+A +  NEM+  E   +PDV+T NILL  LC++  +  ++ L N++
Sbjct: 567 NIIIHGFCLEGNVEKAFQFHNEMI--ENLFKPDVYTCNILLRGLCREGMLEKALKLFNTL 624

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
           + +G D D+VT N  +++                     L K  +    + ++  M  K 
Sbjct: 625 VSKGKDIDVVTYNTIISS---------------------LCKEGKFENAYDLLTEMEAKK 663

Query: 631 LSPQTSTWERVVQELCRPKRIQAA 654
           L P   T++ ++  L    RI+ A
Sbjct: 664 LGPDQYTYKVIIAALTDAGRIKEA 687



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 199/415 (47%), Gaps = 26/415 (6%)

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCK---NGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           A  + ++M+     P  +T N L+N L +   +  +  A +++ +    G +PN  ++N 
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI+G CL+  +  A+  +++M    C+P+ V+Y TI++ L+K     +   +L+ M+ + 
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              N++ Y+ L+ G  + G  ++A K+ + M      P    Y+ L++G C  GK DEA 
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            I  EM       +  TY++L+ G  +     +   + ++M K     N V Y++++  +
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWM 398

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C+ G + EA     +M   G  PD V Y+++I   C AG + +A ++ +EM     K   
Sbjct: 399 CKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKI-- 456

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           D +T N +L+ LC +  +  + +LL S   RG   D V+  I                  
Sbjct: 457 DTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGI------------------ 498

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
              L +  FK ++      + + M ++ + P T T+  V+  LC+ +++  AI+K
Sbjct: 499 ---LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDK 550



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/473 (25%), Positives = 217/473 (45%), Gaps = 29/473 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L+  Y   G  K    V+  M R   +    ++  +   +     ++EA R+   M
Sbjct: 285 TYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEM 344

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++ +    V ++N++++   Q   +  + E Y+ I       +  N +T+N+++K +C+
Sbjct: 345 -EKMNVLPDVVTYNTLIDGCSQ---WRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCK 400

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A     +M      PD  TY TL+   CK  ++ +A  ++DEM   G      T
Sbjct: 401 KGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWT 460

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            N +++ LC   +L  A  L+ +   +G + +EV+Y  LI G       D+A++L D M 
Sbjct: 461 LNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMK 520

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             + MP+ +TY ++I GL +  R VD A   L  M E     +E  Y+ +I G   EG  
Sbjct: 521 ERQIMPSTITYNSVIGGLCQ-SRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNV 579

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E A +   +M+E   KP+    + L+ GLCR G  ++A ++   +++ G   +  TY+++
Sbjct: 580 EKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTI 639

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +    + GK   A ++  +M       ++  Y V+I  L + G+++EA     +M+  G 
Sbjct: 640 ISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699

Query: 504 KPD-----------------------VVAYSSMIHGLCNAGSVEEALKLFNEM 533
             D                        +AYS  I+ LCN    ++A+ LF E+
Sbjct: 700 VHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEV 752



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 171/353 (48%), Gaps = 27/353 (7%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  AY KA  + +A R+   M  +   K    + N++L+ +  E    +  E YN + +A
Sbjct: 429 LIGAYCKAGKMGKAFRMMDEMTSK-GLKIDTWTLNTILHCLCVE---KKLDEAYNLLCSA 484

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                + + +++ ++I    +    D A+ L+ EM  R   P   TY +++ GLC+  ++
Sbjct: 485 SKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKV 544

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A+  L+EM  +G  P   T+N++I+G C  G + +A +  + M      P+  T N L
Sbjct: 545 DQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNIL 604

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           + GLC +G L+KA+ L + +V+     + VTY TII+ L K G+  +   +L  ME +K 
Sbjct: 605 LRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKL 664

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN---------------------- 401
             ++Y Y  +I+ L   G+ ++A +   +M+E G   +                      
Sbjct: 665 GPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDF 724

Query: 402 -TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            ++ YS  I+ LC   K  +A  +  E+   G A N +TY +LM+G  +  K 
Sbjct: 725 KSIAYSDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKS 777



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 28/221 (12%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL-PNTLTFNLVIKTVCRLGLVDNAIQL 214
           ++N +++    EG   +A +F+N ++     N+  P+  T N++++ +CR G+++ A++L
Sbjct: 565 TYNIIIHGFCLEGNVEKAFQFHNEMIE----NLFKPDVYTCNILLRGLCREGMLEKALKL 620

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           F  +  +  + D+ TY T++  LCKE + + A  LL EM+     P   T+ V+I  L  
Sbjct: 621 FNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTD 680

Query: 275 NGELGRAAKLVDNMFLKGCLPNE-----------------------VTYNTLIHGLCLKG 311
            G +  A +    M   G + ++                       + Y+  I+ LC + 
Sbjct: 681 AGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQH 740

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
               A+ L   +       N+ TY  ++ GL+K  ++   A
Sbjct: 741 KYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSKA 781


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 145/484 (29%), Positives = 240/484 (49%), Gaps = 30/484 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL  +N ++   HM+  P+T+ F  ++ ++ ++      + L  +M      PD+YT   
Sbjct: 134 ALSSFNRML---HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C   RL  A  +L ++   GC P   TFN LI GLC  G++G A  L D    +G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ VTY TL++GLC  GN   A+ LL  MV   C PN + Y TII+ L K  +  +  
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M  +    + + Y++LI  L    + +    L  +M+     PN VV+S ++D L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G    A +++  MI  G   +  TY++LM G     +  +AV+++  M    CV N 
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y++LI+G C+  ++ +A  +  QM  +G   D V Y+++IHGLC+ G ++ A+ LF+E
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--K 590
           M+       PD+ TY ILL+ LCK  +++ ++ LL ++     D D++  NI +  +   
Sbjct: 491 MVA--SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 548

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
            +LEA +D           LF    + G            L P   T+  ++  LC+   
Sbjct: 549 GELEAARD-----------LFSNLSSKG------------LQPDVRTYNIMIHGLCKRGL 585

Query: 651 IQAA 654
           +  A
Sbjct: 586 LDEA 589



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 241/488 (49%), Gaps = 28/488 (5%)

Query: 161 LNVIIQEGLYHRALEF-YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           LN++I    + R L + ++ +     +   P+  TFN +I+ +C  G +  A+ LF +  
Sbjct: 188 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 247

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
               +PD+ TY TLM+GLCK      A+ LL  M    C P  + +N +I+ LCK+ ++ 
Sbjct: 248 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 307

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  L   M  KG  P+  TYN+LIH LC         +LL+ MV SK MPN V + T++
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           + L K G       V+  M +R    +   Y+ L+ G     + ++A+K++  M+ KGC 
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 427

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN   Y+ LI+G C++ + D+A  +L +M   G  A+  TY++L+ G    G+   A+ +
Sbjct: 428 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 487

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           + +M  +  + + V Y +L+  LC++  L EA ++   +       D++ Y+  I G+C 
Sbjct: 488 FHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCR 547

Query: 520 AGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           AG +E A  LF+    L  K  QPDV TYNI+++ LCK+  +  +  L   M + GC  D
Sbjct: 548 AGELEAARDLFSN---LSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRD 604

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTST 637
               N                        IR F R   T G  ++++ ML +  S   ST
Sbjct: 605 GCIYNTI----------------------IRGFLRSNETFGATQLLQEMLAEGFSADVST 642

Query: 638 WERVVQEL 645
              +V+ L
Sbjct: 643 TTLIVEML 650



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 195/363 (53%), Gaps = 4/363 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  +  K   V EA  LF  M+ +      + ++NS+++ +     +       N +VN+
Sbjct: 296 IIDSLCKDRQVTEAFNLFSEMITK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 354

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I+PN + F+ V+  +C+ G++  A  +   M  R  EPD+ TY  LMDG C  + +
Sbjct: 355 K---IMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 411

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEAV + D M   GC P   ++N+LING C+   + +A  L++ M L+G + + VTYNTL
Sbjct: 412 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 471

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           IHGLC  G L  A++L   MVAS  +P+ VTY  +++ L K     +   +L ++E    
Sbjct: 472 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +  +Y+  I G+ + G+ E A  L+  +  KG +P+   Y+ +I GLC+ G  DEA +
Sbjct: 532 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANK 591

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  +M  NGC+ +   Y+++++GF  S +   A ++ ++M       +    ++++  L 
Sbjct: 592 LFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLS 651

Query: 484 EDG 486
           +DG
Sbjct: 652 DDG 654



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 174/357 (48%), Gaps = 16/357 (4%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A+S  +RM+     P+ V +  ++  + K+        +   M+      + Y  + 
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI+      +   A  +  ++++ GC+P+   ++ LI GLC  GK  EA  +  + I  G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              +  TY +LM G  + G    A+ + + M + NC  N + Y+ +I  LC+D ++ EA 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++++M+++G  PD+  Y+S+IH LCN    +    L NEM+    K  P+V  ++ +++
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV--NSKIMPNVVVFSTVVD 368

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFL------- 603
           ALCK+  I+ + D+++ M+ RG +PD+VT    +    L+ +++      D +       
Sbjct: 369 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 428

Query: 604 -----NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                N L     + QR      ++E M  + L   T T+  ++  LC   R+Q AI
Sbjct: 429 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 485



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 159/344 (46%), Gaps = 12/344 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI    N  ++K +  +L  M   K +      + +F     A   E  I + H +
Sbjct: 327 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIM----PNVVVFSTVVDALCKEGMIAIAHDV 382

Query: 145 VDEFHCKRTVK----SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           VD    KR V+    ++ ++++          A++ ++ +V   H   +PN  ++N++I 
Sbjct: 383 VD-MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV---HKGCVPNVRSYNILIN 438

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C++  +D A+ L  +M ++    D  TY TL+ GLC   RL  A+ L  EM   G  P
Sbjct: 439 GYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIP 498

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             VT+ +L++ LCKN  L  A  L+  +       + + YN  I G+C  G L+ A  L 
Sbjct: 499 DLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLF 558

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             + +    P+  TY  +I+GL K G   +  ++   M+E     +  IY+T+I G  + 
Sbjct: 559 SNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRS 618

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   A +L ++M+ +G   +    + +++ L   G     E +
Sbjct: 619 NETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDGLDQSFERL 662



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 23/161 (14%)

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
           TQM S G  PDV   + +I+  C+   +  A  +  ++L L    QPD  T+N L+  LC
Sbjct: 174 TQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKL--GCQPDNTTFNTLIRGLC 231

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
            +  I  ++ L +  +  G  PD+VT    +  L                      K   
Sbjct: 232 VEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGL---------------------CKVGN 270

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           TS   +++  M+QK   P    +  ++  LC+ +++  A N
Sbjct: 271 TSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 311


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/579 (28%), Positives = 270/579 (46%), Gaps = 61/579 (10%)

Query: 34  RSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHY 93
           R  R   +    S  + + T+P     +E   +D   +S   + SY+      ++ + H 
Sbjct: 9   RIARLSRIAQVPSRARSIATQPVAQESTEDEANDLAASSNAGVWSYR-----DFAQMLHS 63

Query: 94  ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVD-EFHCKR 152
           ++S    S+E  L R+RRE   +   + + IF+    A L  E   LF  +    F  + 
Sbjct: 64  SSSSSRHSIEAALDRLRRE---ISTDAVVKIFQCLKDADLAWE---LFQCLSSPRFGFQH 117

Query: 153 TVKSFNSVLNVIIQEGLYHRA---------------LEFYNHIVNA-------------- 183
           +V + N++L+V  +   +  A               +E +N ++                
Sbjct: 118 SVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI 177

Query: 184 ----KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF----REMPVRNCEPDIYTYCTLMD 235
               +   + P+  T NLV+  +C+ G V  A+  F    R MPV        T+  L++
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAA-----TFSILIN 232

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           GL K   + +A  L  E   +GC     T+  ++N L KN ++  A  L++ +   GC P
Sbjct: 233 GLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTP 292

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
              TYN L++GLC  G L++A+ LL ++V + C P+ VTY ++I+GL K  R+ +  ++ 
Sbjct: 293 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 352

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M  R   ++   Y+ LI GL + GK   A  ++K M   GC P+ V  S +IDGL + 
Sbjct: 353 KEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 412

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G+   A  I   M   G A N   YS+L+ G  ++ K   A+E+   M K  C  + + Y
Sbjct: 413 GRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITY 472

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           ++LI GLC+ G +  AR  + +ML  GCKPDV  Y+ +I GLC AG+ + A  + ++M  
Sbjct: 473 NILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-- 530

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
                    F Y+ L++ LCK   +     L + M   G
Sbjct: 531 -----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSG 564



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 167/593 (28%), Positives = 265/593 (44%), Gaps = 109/593 (18%)

Query: 68  EIFN--STPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV--VLEKSFIF 123
           E+F   S+P+ G             QH  ++G+  +L  V  R +R +    +L+     
Sbjct: 103 ELFQCLSSPRFG------------FQHSVHTGN--ALLDVFARTKRHREAGNLLKNELAT 148

Query: 124 IFK-----------AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHR 172
           IF+            Y  A   EEA  +   M ++F    ++K+ N VL+ + + G    
Sbjct: 149 IFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLA 208

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ +  +      ++  +  TF+++I  + + G++  A  L +E     C  DI+TY  
Sbjct: 209 AMDHFEAV----RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTA 264

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++ L K  ++ EAV L++++  +GC PT  T+N L+NGLCK G L  A  L+  +   G
Sbjct: 265 IVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG 324

Query: 293 CLPNEVTYNTLI-----------------------------------HGLCLKGNLDKAV 317
           C P+ VTY +LI                                    GL   G + +A 
Sbjct: 325 CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQAS 384

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           S+   M +  C+P+ VT  T+I+GL K GR     R+  SME R    NE +YS LI GL
Sbjct: 385 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGL 444

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K  K + A+++  QM +  C P+T+ Y+ LIDGLC+ G  + A     EM+  GC  + 
Sbjct: 445 CKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDV 504

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           +TY+ L+ G  ++G    A  +  DM+ +  VY     S L+ GLC+ GKL    M++ +
Sbjct: 505 YTYNILISGLCKAGNTDAACGVLDDMSSSRFVY-----SSLVDGLCKSGKLEGGCMLFHE 559

Query: 498 MLSRG--------------CK-------------------PDVVAYSSMIHGLCNAGSVE 524
           M   G              CK                   P   AY+S+I  L  +G V 
Sbjct: 560 MERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVN 619

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           E   ++ EM       +PD  TYN LLN +   + +  +      M  RG  P
Sbjct: 620 EGQAVYQEM---TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/312 (24%), Positives = 144/312 (46%), Gaps = 26/312 (8%)

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
           F  + +  + L+    +  +  +A  L K  +    +P+   ++ LI G C   +P+EA 
Sbjct: 115 FQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAF 174

Query: 423 EILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            ++ EM  + G A +  T++ ++ G  +SGK   A++ ++ + ++  V +   +S+LI+G
Sbjct: 175 AVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPV-SAATFSILING 233

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           L + G + +A  +  +  + GC  D+  Y+++++ L     ++EA+ L  ++        
Sbjct: 234 LVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITA--NGCT 291

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KEKLEAPQD 598
           P + TYN LLN LCK   +  +IDLL  ++D GC PD+VT    +  L   K   EA + 
Sbjct: 292 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK- 350

Query: 599 GTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
                 E+A R               L +  +      + + M      P   T   ++ 
Sbjct: 351 ---LFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 407

Query: 644 ELCRPKRIQAAI 655
            L +  RI AA+
Sbjct: 408 GLSKAGRIGAAV 419


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/420 (32%), Positives = 214/420 (50%), Gaps = 25/420 (5%)

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           GL  RA   YN ++    M ++ N +      + +C +G  + A  + REM  +   PD 
Sbjct: 69  GLAERA---YNEML---EMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDS 122

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            TY  ++  LC  +++++A  L  EM+ +G  P   T+  L++  CK G + +A    D 
Sbjct: 123 STYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDE 182

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   GC PN VTY  LIH       L +A  + + M+++ C+PN VTY  +I+G  K G 
Sbjct: 183 MQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGE 242

Query: 348 AVDGARVLMSMEERKFHV-----------------NEYIYSTLISGLFKEGKAEDAMKLW 390
                ++   M+  K  +                 N   Y  L+ GL K  K ++A  L 
Sbjct: 243 TEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLL 302

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           + M  +GC+PN ++Y ALIDG C+VGK DEA+E+  +M+ +GC+ N +TYSSL+   F+ 
Sbjct: 303 ETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKD 362

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            +   A+++   M +N+C  N V Y+ ++ GLC+ GK  EA  +   M  +GC P+VV Y
Sbjct: 363 KRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTY 422

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           ++MI G   AG V+  L+L   M        P+  TY +L+N  C    +  +  LL  M
Sbjct: 423 TAMIDGFGKAGRVDRCLELLQLM--TSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEM 480



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/496 (26%), Positives = 231/496 (46%), Gaps = 55/496 (11%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           ST+  +I +  N+   +    +   M+R        ++  +   + K  L+E+A   F  
Sbjct: 123 STYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDE 182

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M  +  C   V ++ ++++  ++     RA E +  +++      +PN +T+  +I   C
Sbjct: 183 MQQD-GCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSN---GCVPNIVTYTALIDGHC 238

Query: 204 RLGLVDNAIQLFREMPVRNC-----------------EPDIYTYCTLMDGLCKENRLDEA 246
           + G  + A Q++  M                      EP++ TY  L+DGLCK +++ EA
Sbjct: 239 KAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEA 298

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             LL+ M ++GC P  + ++ LI+G CK G+L  A ++   M   GC PN  TY++LI  
Sbjct: 299 RDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDK 358

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           L     LD A+ +L +M+ + C PN V Y  +++GL K+G+  +  R+++ MEE+  + N
Sbjct: 359 LFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPN 418

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+ +I G  K G+ +  ++L + M  KGC PN + Y  LI+  C  G  D+A ++L 
Sbjct: 419 VVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLE 478

Query: 427 EM---------------------------------INNGCAANAFTYSSLMKGFFESGKG 453
           EM                                   +G       Y  L+  F ++G+ 
Sbjct: 479 EMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRL 538

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A+E+ ++++  +  Y    Y  LI  L    K+ +A  +++ M  RG  P++     +
Sbjct: 539 EMALELHEELSSFSAAYQNT-YVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCL 597

Query: 514 IHGLCNAGSVEEALKL 529
           I GL   G  EEAL+L
Sbjct: 598 IKGLLRVGKWEEALQL 613



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 207/457 (45%), Gaps = 46/457 (10%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M    C P    + +L+   C+      A  LL +M + G  P  V +N+LI G+C   +
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 278 L------GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           L      G A +  + M   G + N+V        LC  G  +KA +++  M++   +P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             TY  +I  L    +     ++   M+      + Y Y+TL+    K G  E A   + 
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M + GC PN V Y+ALI    +  K   A EI   M++NGC  N  TY++L+ G  ++G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 452 KGHKAVEIWKDMAKNNC------VY-----------NEVCYSVLIHGLCEDGKLREARMV 494
           +  KA +I+  M  +        +Y           N V Y  L+ GLC+  K++EAR +
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
              M   GC+P+ + Y ++I G C  G ++EA ++F +M  L     P+V+TY+ L++ L
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM--LGHGCSPNVYTYSSLIDKL 359

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
            K   +  ++ +L  M++  C P++V                        E+   L K  
Sbjct: 360 FKDKRLDLALKVLTKMLENSCAPNVV---------------------IYTEMVDGLCKVG 398

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           +T   ++++ +M +K   P   T+  ++    +  R+
Sbjct: 399 KTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRV 435



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 154/382 (40%), Gaps = 35/382 (9%)

Query: 3   KWSLPHTKILLTITNSAMK---MKTLSLTTIPSERSHRFFSVRSAVSSNKQMETEPQGNA 59
           K  +P   I   I +S +K   + T         ++H+    R  + +      EP    
Sbjct: 257 KVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPN--- 313

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV---- 115
              Q   D + +   K+G        F  ++ H   S +  +   ++ ++ ++KR+    
Sbjct: 314 ---QIIYDALIDGFCKVGKLDEAQEVFTKMLGH-GCSPNVYTYSSLIDKLFKDKRLDLAL 369

Query: 116 -----VLEKS-------FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
                +LE S       +  +     K    +EA RL   M++E  C   V ++ ++++ 
Sbjct: 370 KVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLM-LMMEEKGCYPNVVTYTAMIDG 428

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
             + G   R LE    + +       PN +T+ ++I   C  GL+D+A +L  EM     
Sbjct: 429 FGKAGRVDRCLELLQLMTSK---GCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYW 485

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
              I  Y  +++G   E     ++ LL E+  DG  P    + +LI+   K G L  A +
Sbjct: 486 PKHIGMYRKVIEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALE 543

Query: 284 LVDNMF-LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           L + +        N  TY +LI  L L   +DKA  L   M     +P       +I GL
Sbjct: 544 LHEELSSFSAAYQN--TYVSLIESLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGL 601

Query: 343 VKLGRAVDGARVLMSMEERKFH 364
           +++G+  +  ++  S+ +   H
Sbjct: 602 LRVGKWEEALQLSDSICQMDIH 623


>gi|125537408|gb|EAY83896.1| hypothetical protein OsI_39118 [Oryza sativa Indica Group]
          Length = 693

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 258/515 (50%), Gaps = 44/515 (8%)

Query: 111 REKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY 170
           R+ R      F  +  +Y +A  +  A+R+ H M  +  C   +   N  +NV++  G  
Sbjct: 122 RQWRYRHAPEFAQLMLSYSRAGKLRSAMRVLHLMQKD-GCAPDISICNMAVNVLVVAGRV 180

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
            +ALEF   +   + + + P+  T+N +IK +C    V +A+++   M    C PD  +Y
Sbjct: 181 DKALEFAERM---RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISY 237

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVD-GCFPTPVTFNVLINGL----------------- 272
            T+M  LCKE R++E   LL  M+ D G FP  VT+NVLI+GL                 
Sbjct: 238 YTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESE 297

Query: 273 ------------------CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
                             C NG +  A ++V  M  KGC P+ VTY+T++ G C  G LD
Sbjct: 298 GKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELD 357

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A  ++  M  + C PN VT+  ++NGL K+G+  +   +L   EE  +  ++  YS ++
Sbjct: 358 QARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVM 417

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G  +EGK +++  +  QM++KG  P TV  + LI  LC+ GKP EA++ + +  + GC 
Sbjct: 418 HGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCT 477

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N   +++++ GF   G    A+ +  DM  +N   + V Y+V++  L + G+L+EA  +
Sbjct: 478 INVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGL 537

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +ML+RG  P  V Y ++IH  C  G++E+ L L  +ML  +         YN ++  L
Sbjct: 538 VEKMLNRGLLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKS----AYNQVVEKL 593

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           C    ++ +  LL  ++      D  TC+I + + 
Sbjct: 594 CAFGKLNEAYSLLYKILRTASVRDAQTCHILMESF 628



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 230/480 (47%), Gaps = 27/480 (5%)

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           G   RA EF+            P    F  ++ +  R G + +A+++   M    C PDI
Sbjct: 108 GDVRRAFEFFRWADRQWRYRHAPE---FAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDI 164

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
                 ++ L    R+D+A+   + M+  G  P   T+N LI GLC    +  A +++  
Sbjct: 165 SICNMAVNVLVVAGRVDKALEFAERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGV 224

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLG 346
           M   GC P++++Y T++  LC +  +++   LL RM     + P++VTY  +I+GL K G
Sbjct: 225 MLQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHG 284

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
            A +    L   E ++F V+E  YS ++      G+  +A ++  +M+ KGC+P+ V YS
Sbjct: 285 HADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYS 344

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            ++DG CR+G+ D+A +++  M  N C  N  T+++L+ G  + GK  +A E+     + 
Sbjct: 345 TVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEE 404

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               +++ YSV++HG   +GKL+E+  V  QML +G  P  V  + +IH LC  G   EA
Sbjct: 405 WWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEA 464

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
                +  C       +V  +  +++   +Q ++  ++ L++ M      PD+VT  + +
Sbjct: 465 KDFMEQ--CQSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVV 522

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
            AL                      K+ R      +VE ML + L P   T+  V+   C
Sbjct: 523 DALG---------------------KKGRLKEATGLVEKMLNRGLLPTPVTYRTVIHRYC 561



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/492 (24%), Positives = 227/492 (46%), Gaps = 10/492 (2%)

Query: 111 REKRVVLEK---SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE 167
           R +RV +E    ++  + K    A  V +A+ +   M+    C     S+ +V++ + +E
Sbjct: 189 RMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQN-GCPPDKISYYTVMSFLCKE 247

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
                       + N     + P+ +T+N++I  + + G  D A++  RE   +    D 
Sbjct: 248 KRVEEVRGLLQRMRN--DAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDE 305

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
             Y  ++   C   R+ EA  ++ EM   GC P  VT++ +++G C+ GEL +A K++ +
Sbjct: 306 VGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKH 365

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M+   C PN VT+  L++GLC  G   +A  LL++       P+++TY  +++G  + G+
Sbjct: 366 MYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGK 425

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +   V++ M ++ F       + LI  L K+GK  +A    +Q   KGC  N V ++ 
Sbjct: 426 LKESCDVVVQMLQKGFFPTTVEINLLIHALCKDGKPAEAKDFMEQCQSKGCTINVVNFTT 485

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I G  R G  + A  ++ +M  +    +  TY+ ++    + G+  +A  + + M    
Sbjct: 486 VIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRG 545

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            +   V Y  +IH  CE G L +   +  +ML+R  +    AY+ ++  LC  G + EA 
Sbjct: 546 LLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLAR--QEMKSAYNQVVEKLCAFGKLNEAY 603

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            L  ++  L   S  D  T +IL+ +   +     + ++   M  R   PD+  C     
Sbjct: 604 SLLYKI--LRTASVRDAQTCHILMESFLNRGLGLQAYNVACRMFRRNLIPDVKLCQKVDN 661

Query: 588 ALKEKLEAPQDG 599
            L  +   P  G
Sbjct: 662 QLASEKNKPVPG 673


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/526 (27%), Positives = 254/526 (48%), Gaps = 32/526 (6%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+  +H          T+ + NS+L  +++ G    AL F+   ++       PN  +FN
Sbjct: 79  ALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDALGFFQSSISE------PNVSSFN 132

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           ++++        +    L REM  R    +  T+  ++  LC    LD+AV   + +  +
Sbjct: 133 ILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPN 192

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            C PT  T+ VL++GLCK  ++ RA  + + M  KG  P+ + Y++LI GL   G +D+A
Sbjct: 193 KCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEA 252

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             L+D MVA    P  V Y +I+ GL K GR  +  + +  M  R+       YS +++G
Sbjct: 253 RKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTG 312

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
               GK E A  + ++M ++ C P+T+ Y+  I+ L  +G+ +EAE++   M+  GC  +
Sbjct: 313 YIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPD 372

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY  ++  F + G    A  + + M K     N   Y++++ G  +  +L EA  ++ 
Sbjct: 373 MHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ 432

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           ++L  G  P  V Y+++I+ LC    ++EAL+L  EM   + + +P + TY+++++ L K
Sbjct: 433 RILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGK 492

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
                 + DLL  M+D G  PD  T     T+L + L                     + 
Sbjct: 493 VGMEERAFDLLAEMIDNGVIPDCFT----YTSLIQTLAGA-----------------GKV 531

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
           S   +++E ML+  + P   T+  +VQ LCR     + ++  W  L
Sbjct: 532 SRAMELLEEMLKAGIFPDDHTYGTLVQILCR-----SDVDAAWDLL 572



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 194/414 (46%), Gaps = 43/414 (10%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
           +A+ ++N +   K     P   T+ +++  +C+   V+ A  +F EM  +  +PDI  Y 
Sbjct: 181 KAVSYFNSVSPNK---CEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYS 237

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL- 290
           +L+DGL K  R+DEA  L+D M   G  PT V +  ++ GLCK G +  A K +  M   
Sbjct: 238 SLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRR 297

Query: 291 ----------------------------------KGCLPNEVTYNTLIHGLCLKGNLDKA 316
                                             + C P+ ++Y   I  L   G  ++A
Sbjct: 298 RLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEA 357

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             + + MV   C P+  TYG II+   K G       VL  M++     N YIY+ ++ G
Sbjct: 358 EKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDG 417

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG--CA 434
             K  + E+A++L++++++ G  P+TV Y+ +I+ LC++ K DEA E+L EM        
Sbjct: 418 FVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELE 477

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  TYS ++ G  + G   +A ++  +M  N  + +   Y+ LI  L   GK+  A  +
Sbjct: 478 PSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMEL 537

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             +ML  G  PD   Y +++  LC +  V+ A  L  EM  +     P+ FT+ 
Sbjct: 538 LEEMLKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEM--MRNGHTPNEFTFK 588



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 160/316 (50%), Gaps = 7/316 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA++    M      +  V +++ ++   I  G   +A      + +    +  P+T+
Sbjct: 284 IQEAVKTIQEMR-RRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMAD---RDCAPDTI 339

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++ + I+ +  +G  + A ++F  M  + C+PD++TY  ++D  CKE  +  A  +L  M
Sbjct: 340 SYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLM 399

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P    + ++++G  K+  L  A +L   +   G LP+ VTYNT+I+ LC    +
Sbjct: 400 DKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKM 459

Query: 314 DKAVSLLDRMVASK--CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           D+A+ LL  M   K    P+ VTY  II+GL K+G       +L  M +     + + Y+
Sbjct: 460 DEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYT 519

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           +LI  L   GK   AM+L ++M++ G  P+   Y  L+  LCR    D A ++L EM+ N
Sbjct: 520 SLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRN 578

Query: 432 GCAANAFTYSSLMKGF 447
           G   N FT+ ++ KGF
Sbjct: 579 GHTPNEFTFKAVEKGF 594



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/228 (26%), Positives = 112/228 (49%), Gaps = 7/228 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+  +I ++   G   +   VL  M  +K  V    +I+  I   + K+  +EEA+ L+ 
Sbjct: 375 TYGIIIDNFCKEGSMAAATHVLRLM--DKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ 432

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            ++ +     TV ++N+V+N + +      ALE    +   K   + P+ +T++++I  +
Sbjct: 433 RILKDGILPSTV-TYNTVINALCKLKKMDEALELLREMQRRKE-ELEPSIVTYSMIIHGL 490

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            ++G+ + A  L  EM      PD +TY +L+  L    ++  A+ LL+EM   G FP  
Sbjct: 491 GKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDD 550

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            T+  L+  LC++ ++  A  L+  M   G  PNE T+  +  G  L+
Sbjct: 551 HTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEKGFRLQ 597


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 259/516 (50%), Gaps = 20/516 (3%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+  F+ ++   H   ++  F  +L  I +   Y   L     +       + PN  
Sbjct: 46  LDDALSSFNRLL-HMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQM---DSFGVPPNVY 101

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I + C L  V  A  +  ++     +PD  T+ TL+ GLC E ++ EA+ L D+M
Sbjct: 102 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  LINGLCK G    A +L+ +M    C P+ V Y ++I  LC    +
Sbjct: 162 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +L  +MV     P+  TY ++++ L  L        +L  M   K   +  I+ST+
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEGK  +A ++   M+++G +P+ V Y+ L+DG C   + DEA ++   M+  G 
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A +  +Y++L+ G+ +  K  KA+ ++++M +   + +   Y+ L++GLC  G+L++A  
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M++RG  PD+V YS ++  LC    +EEA+ L   +        PD+  YNI+++ 
Sbjct: 402 LFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEA--SNLNPDIQVYNIIIDG 459

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--------KEKLEAPQDGTD---- 601
           +C+   +  + DL +++  +G  P + T NI +  L          KL    DG D    
Sbjct: 460 MCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPD 519

Query: 602 --FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
               N +A    +   T    +++E ML +  S  +
Sbjct: 520 GCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADS 555



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 226/436 (51%), Gaps = 7/436 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F +++  +  EG    AL  ++ +++       PN +T+  +I  +C++G    AI+L 
Sbjct: 137 TFTTLIRGLCVEGKIGEALHLFDKMIDE---GFQPNVVTYGTLINGLCKVGNTSAAIRLL 193

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R M   NC+PD+  Y +++D LCK+ ++ EA  L  +M   G  P   T+  L++ LC  
Sbjct: 194 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 253

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            E      L++ M     LP+ V ++T++  LC +G + +A  ++D M+     P+ VTY
Sbjct: 254 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 313

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G        +  +V   M  + F  +   Y+TLI+G  K  K + AM L+++M  
Sbjct: 314 TTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCR 373

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P+T  Y+ L+ GLC VG+  +A  +  EM+  G   +  TYS L+    ++    +
Sbjct: 374 KEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEE 433

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ + K +  +N   +   Y+++I G+C  G+L  AR +++ + S+G  P V  Y+ MIH
Sbjct: 434 AMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIH 493

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  G + EA KLF EM   +    PD  TYN +     + +    +I LL  M+ RG 
Sbjct: 494 GLCKRGLLNEANKLFMEMDGND--CSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551

Query: 576 DPDLVTCNIFLTALKE 591
             D  +C + L+ L E
Sbjct: 552 SAD--SCFLMLSVLSE 565



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/447 (29%), Positives = 221/447 (49%), Gaps = 23/447 (5%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D+A+  F  +   +  P I  +  L+  + K       + L  +M   G  P   T N+
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LIN  C    +G A  ++  +   G  P+  T+ TLI GLC++G + +A+ L D+M+   
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN VTYGT+INGL K+G      R+L SME+     +  IY+++I  L K+ +  +A 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+ QM+ +G  P+   Y++L+  LC + +      +L +M+N+    +   +S+++   
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + GK  +A EI   M +     + V Y+ L+ G C   ++ EA  V+  M+ +G  PDV
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           ++Y+++I+G C    +++A+ LF EM     +  PD  TYN L+  LC    +  +I L 
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEMC--RKEWIPDTKTYNTLMYGLCHVGRLQDAIALF 403

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVML 627
           + M+ RG  PDLVT +I L +L +             E A+ L K    S          
Sbjct: 404 HEMVARGQMPDLVTYSILLDSLCKNRHL---------EEAMALLKAIEASN--------- 445

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAA 654
              L+P    +  ++  +CR   ++AA
Sbjct: 446 ---LNPDIQVYNIIIDGMCRAGELEAA 469



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 212/442 (47%), Gaps = 5/442 (1%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           F+  +     KLG +Q   +TF +LI+     G       +  +M  E       ++  +
Sbjct: 118 FAFSVLAKILKLG-HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTL 176

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
                K      AIRL  +M ++ +C+  V  + S+++ + ++     A   ++ +V   
Sbjct: 177 INGLCKVGNTSAAIRLLRSM-EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVG-- 233

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              I P+  T+  ++  +C L    +   L  +M      PD+  + T++D LCKE ++ 
Sbjct: 234 -QGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVT 292

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  ++D M   G  P  VT+  L++G C   E+  A K+ D M  KG  P+ ++Y TLI
Sbjct: 293 EAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLI 352

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +G C    +DKA+ L + M   + +P+  TY T++ GL  +GR  D   +   M  R   
Sbjct: 353 NGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQM 412

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   YS L+  L K    E+AM L K +      P+  VY+ +IDG+CR G+ + A ++
Sbjct: 413 PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 472

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              + + G   + +TY+ ++ G  + G  ++A +++ +M  N+C  +   Y+ +  G  +
Sbjct: 473 FSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQ 532

Query: 485 DGKLREARMVWTQMLSRGCKPD 506
           + +   A  +  +ML+RG   D
Sbjct: 533 NNETLRAIQLLEEMLARGFSAD 554



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/360 (25%), Positives = 173/360 (48%), Gaps = 20/360 (5%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            LD A+S  +R++     P+ V +  ++  + K+        +   M+      N Y  +
Sbjct: 45  TLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLN 104

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+      +   A  +  ++++ G +P+   ++ LI GLC  GK  EA  +  +MI+ 
Sbjct: 105 ILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 164

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  TY +L+ G  + G    A+ + + M + NC  + V Y+ +I  LC+D ++ EA
Sbjct: 165 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 224

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +++QM+ +G  PD+  Y+S++H LCN    +    L N+M+    K  PDV  ++ ++
Sbjct: 225 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMV--NSKILPDVVIFSTVV 282

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR-- 609
           +ALCK+  ++ + ++++ M+ RG +PD+VT    +      L++  D    + ++ +R  
Sbjct: 283 DALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG--HCLQSEMDEAVKVFDMMVRKG 340

Query: 610 --------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                           K  +      + E M +K   P T T+  ++  LC   R+Q AI
Sbjct: 341 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAI 400


>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 726

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 163/581 (28%), Positives = 279/581 (48%), Gaps = 44/581 (7%)

Query: 45  VSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEM 104
           V S  Q+    +  A+ +   + E F    +   Y+     F  ++   +N+        
Sbjct: 89  VLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARR 148

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           V+  M R       + F  +  +Y +A  +  A+R+ H M  +  C   +   N  +NV+
Sbjct: 149 VVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKD-GCAPDISICNMAVNVL 207

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
           +  G   +ALEF   +   + + + P+  T+N +IK +C    V +A+++   M    C 
Sbjct: 208 VVAGRVDKALEFAERM---RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCP 264

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD-GCFPTPVTFNVLINGL----------- 272
           PD  +Y T+M  LCKE R++E   LL  M+ D G FP  VT+NVLI+GL           
Sbjct: 265 PDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALE 324

Query: 273 ------------------------CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
                                   C NG +  A ++V  M  KGC P+ VTY+T++ G C
Sbjct: 325 FLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFC 384

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G LD+A  ++  M  + C PN VT+  ++NGL K+G+  +   +L   EE  +  ++ 
Sbjct: 385 RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDI 444

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YS ++ G  +EGK +++  +  QM++KG  P TV  + LI  LC+  KP EA++ + + 
Sbjct: 445 TYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQC 504

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            + GC  N   +++++ GF   G    A+ +  DM  +N   + V Y+V++  L + G+L
Sbjct: 505 QSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRL 564

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           +EA  +  +ML+RG  P  V Y ++IH  C  G++E+ L L  +ML  +         YN
Sbjct: 565 KEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKS----AYN 620

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++  LC    ++ +  LL  ++      D  TC+I + + 
Sbjct: 621 QVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESF 661



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 230/495 (46%), Gaps = 21/495 (4%)

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           G   RA EF+            P    F+ ++  +    L D A ++ R M  R      
Sbjct: 105 GDVRRAFEFFRWADRQWRYRHAPEV--FDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGT 162

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
             +  LM    +  +L  A+ +L  MQ DGC P     N+ +N L   G + +A +  + 
Sbjct: 163 EQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAER 222

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   G  P+  TYN LI GLC    +  A+ ++  M+ + C P++++Y T+++ L K  R
Sbjct: 223 MRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKR 282

Query: 348 AVDGARVLMSME-ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
             +   +L  M  +     ++  Y+ LI GL K G A++A++  ++   K  + + V YS
Sbjct: 283 VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYS 342

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           A++   C  G+  EA+EI+ EMI+ GC  +  TYS+++ GF   G+  +A ++ K M KN
Sbjct: 343 AIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKN 402

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
           +C  N V ++ L++GLC+ GK  EA  +  +       P  + YS ++HG    G ++E+
Sbjct: 403 DCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKES 462

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             +  +M  L+    P     N+L++ALCK    + + D +     +GC  ++V     +
Sbjct: 463 CDVVVQM--LQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVI 520

Query: 587 TALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFL 631
                + +  +     ++++ +                L K+ R      +VE ML + +
Sbjct: 521 HGFSRQGDL-ESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGV 579

Query: 632 SPQTSTWERVVQELC 646
            P   T+  V+   C
Sbjct: 580 LPTPVTYRTVIHRYC 594


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/461 (29%), Positives = 237/461 (51%), Gaps = 6/461 (1%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F ++ K+    +  +EA   F+TM  E     T+++ NS+L++ ++      A   Y  +
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTM-KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
                + I  +  TFN++I  +C+ G +  A      M     +P+I TY T++ G C  
Sbjct: 213 F---RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            R++ A  +L  M+     P   T+  LI+G+CK G L  A+K+ + M  KG  P+ V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTLI G C KGNLD A +  D M+     P   TY ++I+ L    R  +   ++  ++E
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    +   Y+ LI+G  +   A+ A  L  +M+  G KP    Y++L+  L +  +  E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A+++  ++ + G   +A  +++L+ G   +     A E+ KDM +     +EV ++ ++ 
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C +GK+ EAR ++ +M  RG KPD ++++++I G    G +++A ++ NEM  L+   
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM--LDTGF 567

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            P V TYN L+  LCK      + +LL  M+ +G  PD  T
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTT 608



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 227/457 (49%), Gaps = 23/457 (5%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +++ F+ +IK+ C +   D A + F  M  +   P I T  +L+    K NR + A +L 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM       +  TFN++IN LCK G+L +A   V +M   G  PN VTYNT++HG C  
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G ++ A ++L  M   K  P+  TYG++I+G+ K GR  + +++   M ++    +  IY
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI G   +G  + A     +M++KG  P    Y++LI  L    + DEAE ++ E+  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G + +A TY+ L+ G+       KA  +  +M  +     +  Y+ L+H L +  +++E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++ ++ S G  PD + ++++I G C+  +V+ A +L  +M  +  K  PD  T+N +
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRM--KVPPDEVTFNTI 507

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +   C++  +  + +L + M  RG  PD ++ N  ++                       
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYS-------------------- 547

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            +R      F++   ML    +P   T+  +VQ LC+
Sbjct: 548 -RRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 197/425 (46%), Gaps = 38/425 (8%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA  + +  +     K +V +FN ++NV+ +EG   +A +F  H+  +    + PN +T+
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS---GVKPNIVTY 259

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N ++   C  G V+ A  +   M  +  EPD +TY +L+ G+CK+ RL+EA  + +EM  
Sbjct: 260 NTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG----------------------- 292
            G  P+ V +N LI+G C  G L  A+   D M  KG                       
Sbjct: 320 KGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDE 379

Query: 293 --CL----------PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
             C+          P+ +TYN LI+G C   N  KA  L D M+AS   P + TY ++++
Sbjct: 380 AECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLH 439

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
            L K  R  +   +   +       +  +++ LI G       + A +L K M      P
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + V ++ ++ G CR GK +EA E+  EM   G   +  ++++L+ G+   G    A  + 
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
            +M         + Y+ L+ GLC++ +   A  +  +M+S+G  PD   Y ++I G+   
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619

Query: 521 GSVEE 525
              +E
Sbjct: 620 NIPDE 624



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 184/365 (50%), Gaps = 8/365 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ +++  Y +SG  ++ + +L  M+R+K  +   SF +  +     K   +EEA ++F 
Sbjct: 258 TYNTIVHGYCSSGRVEAADAILTTMKRQK--IEPDSFTYGSLISGMCKQGRLEEASKIFE 315

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV +   + +   +N++++    +G    A  + + ++      I P   T+N +I  +
Sbjct: 316 EMVQK-GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK---GISPTMSTYNSLIHAL 371

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
                 D A  + +E+  +   PD  TY  L++G C+     +A LL DEM   G  PT 
Sbjct: 372 FMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTK 431

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+  L++ L K   +  A  L   +  +G LP+ + +N LI G C   N+  A  LL  
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKD 491

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M   K  P+EVT+ TI+ G  + G+  +   +   M+ R    +   ++TLISG  + G 
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGD 551

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +DA ++  +M++ G  P  + Y+AL+ GLC+  + D AEE+L EM++ G   +  TY +
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611

Query: 443 LMKGF 447
           L++G 
Sbjct: 612 LIEGI 616



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/500 (24%), Positives = 197/500 (39%), Gaps = 82/500 (16%)

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM---PVRNCEPDIYTY 230
           L+F NH  +      L +  T  L I  V RL     A+ L R+       N   +I+ +
Sbjct: 84  LDFLNHFHHK-----LSDARTLCLAIVIVARLPSPKPALHLLRQALGGGTTNSIREIFEF 138

Query: 231 CT----------------LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
                             L+   C  NR DEA      M+  G  PT  T N L++   K
Sbjct: 139 LAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLK 198

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
                 A  L   MF      +  T+N +I+ LC +G L KA   +  M  S   PN VT
Sbjct: 199 LNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVT 258

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
                                              Y+T++ G    G+ E A  +   M 
Sbjct: 259 -----------------------------------YNTIVHGYCSSGRVEAADAILTTMK 283

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            +  +P++  Y +LI G+C+ G+ +EA +I  EM+  G   +A  Y++L+ GF   G   
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A     +M K         Y+ LIH L  + +  EA  +  ++  +G  PD + Y+ +I
Sbjct: 344 MASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILI 403

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +G C   + ++A  L +EML    K  P   TY  LL+ L K++ +  + DL   +   G
Sbjct: 404 NGYCRCANAKKAFLLHDEMLASGIK--PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             PD +  N  +           DG                  G F++++ M +  + P 
Sbjct: 462 VLPDAIMFNALI-----------DGH----------CSNSNVKGAFELLKDMDRMKVPPD 500

Query: 635 TSTWERVVQELCRPKRIQAA 654
             T+  ++Q  CR  +++ A
Sbjct: 501 EVTFNTIMQGHCREGKVEEA 520


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 240/443 (54%), Gaps = 9/443 (2%)

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D+  C   V S+N++++ + +EG   +A   Y+ +++ +   + P+ +T+N +I  + 
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRR---VSPDAVTYNSIIAALS 57

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +   +D A+++   M + NC    +TY ++M G C   + ++A+ +  +M  DG  P  V
Sbjct: 58  KAQAMDRAMEVLTVMVMPNC----FTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVV 113

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+N L++ LCKNG+   A K+ D+M  +G  P+  TY TL+HG   KG L +   LL  M
Sbjct: 114 TYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALM 173

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V +    +   +  +I    K  +  +   V   M ++    N   Y T+I GL K G+ 
Sbjct: 174 VQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRL 233

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +DAM  ++QM++KG  PN VVY++LI  LC   K ++AEE++FE+++ G   N   ++++
Sbjct: 234 DDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTI 293

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +    + G+  ++ +++  +       + + YS LI G C  GK+  A  + T M+S G 
Sbjct: 294 LDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGL 353

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           KPD V YS++I+G C    +E+AL LF EM        PD+ TYNI+L+ L +    + +
Sbjct: 354 KPDSVTYSTLINGYCKINRMEDALALFKEME--SNGVNPDIITYNIILHGLFRTRRTAAA 411

Query: 564 IDLLNSMMDRGCDPDLVTCNIFL 586
            +L   + + G   +L T NI L
Sbjct: 412 KELYARITESGTQLELSTYNIIL 434



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/400 (30%), Positives = 214/400 (53%), Gaps = 6/400 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +++N +I  + + G VD A   + EM  R   PD  TY +++  L K   +D A+ +
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M +  CF    T+N +++G C +G+  +A  +   M   G  P+ VTYN+L+  LC 
Sbjct: 69  LTVMVMPNCF----TYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G   +A  + D MV     P+  TYGT+++G    G  V+   +L  M +    ++ ++
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ LI    K+ K ++ + ++ +M ++G  PN V Y  +IDGLC++G+ D+A     +MI
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMI 244

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   N   Y+SL+       K  KA E+  ++       N V ++ ++  LC++G++ 
Sbjct: 245 DKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVI 304

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           E++ ++  +   G  PDV+ YS++I G C AG ++ A+KL   M+ +  K  PD  TY+ 
Sbjct: 305 ESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLK--PDSVTYST 362

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           L+N  CK + +  ++ L   M   G +PD++T NI L  L
Sbjct: 363 LINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGL 402



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 118/265 (44%), Gaps = 4/265 (1%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           QL    F  LI  Y        + +V  +MR++       ++  +     K   +++A+ 
Sbjct: 179 QLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAML 238

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            F  M+D+      V  + S+++ +     + +A E    I++     I PN + FN ++
Sbjct: 239 NFEQMIDKGLTPNVV-VYTSLIHALCTYDKWEKAEELIFEILDQ---GINPNIVFFNTIL 294

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
            ++C+ G V  + +LF  +      PD+ TY TL+DG C   ++D A+ LL  M   G  
Sbjct: 295 DSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLK 354

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT++ LING CK   +  A  L   M   G  P+ +TYN ++HGL        A  L
Sbjct: 355 PDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKEL 414

Query: 320 LDRMVASKCMPNEVTYGTIINGLVK 344
             R+  S       TY  I+    K
Sbjct: 415 YARITESGTQLELSTYNIILMDFAK 439



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 21/243 (8%)

Query: 428 MINNG-CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           M ++G C  +  +Y++++ G F+ G   KA   + +M       + V Y+ +I  L +  
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            +  A  V T M+     P+   Y+S++HG C++G  E+A+ +F +M       +PDV T
Sbjct: 61  AMDRAMEVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMC--SDGIEPDVVT 114

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE----------AP 596
           YN L++ LCK    + +  + +SM+ RG  PD+ T    L     K              
Sbjct: 115 YNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMV 174

Query: 597 QDGTDF----LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           Q+G        N L     K+++      +   M Q+ L+P    +  V+  LC+  R+ 
Sbjct: 175 QNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLD 234

Query: 653 AAI 655
            A+
Sbjct: 235 DAM 237


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 150/504 (29%), Positives = 242/504 (48%), Gaps = 30/504 (5%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FN +LN + + G +  A      +   +   + P  +T+N ++   C+ G    A Q
Sbjct: 175 VATFNILLNALCERGKFKNAGFLLRKM---EESGVYPTAVTYNTLLNWYCKKGRYKAASQ 231

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L   M  +    D+ TY   +D LC+++R  +  LLL  M+ +  +P  +T+N LI+G  
Sbjct: 232 LIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFV 291

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           + G++  A K+ D M L   LPN +TYNTLI G C  GN+ +A+ L+D MV+    PNEV
Sbjct: 292 REGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEV 351

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TYG ++NGL K       + +L  M      V+   Y+ +I GL K G  E+A++L   M
Sbjct: 352 TYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDM 411

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           ++    P+ V +S LI+G  RVGK + A+EI+ +M   G   N   YS+L+  + + G  
Sbjct: 412 LKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYL 471

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+  +  M  +  V +    +VL+   C  GKL EA      M   G  P+ V +  +
Sbjct: 472 KEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCI 531

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I+G  N+G   +A  +F++M        P +FTY  LL  LC   +I+ ++   + +   
Sbjct: 532 INGYGNSGDALKAFSVFDKMNSF--GHFPSLFTYGGLLKGLCIGGHINEALKFFHRLR-- 587

Query: 574 GCDPDLVTCNIFLTALKEKLEAP--QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
            C P+ V   IF T L     +    D    +NE+    F                    
Sbjct: 588 -CIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDF-------------------- 626

Query: 632 SPQTSTWERVVQELCRPKRIQAAI 655
            P   T+  ++  LC+  +I AA+
Sbjct: 627 LPDNFTYTNLIAGLCKKGKIVAAL 650



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 146/544 (26%), Positives = 258/544 (47%), Gaps = 30/544 (5%)

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRL---FHTMVDEFH-CKRTVKSFNSVLNVIIQEGLYH 171
           +L ++ ++ F      HL++  I L   F  +++ +  C      F+ ++ V ++  +  
Sbjct: 63  ILVRARMYNFAKTTLKHLLQLPIGLNSVFGALMETYPICNSNPAVFDLLIRVCLRNRMVG 122

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            A++ + +++  + +N  P+  T N+V+ ++ +   VD     F+ M  +   PD+ T+ 
Sbjct: 123 DAVQTF-YLMGFRGLN--PSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFN 179

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L++ LC+  +   A  LL +M+  G +PT VT+N L+N  CK G    A++L+D M  K
Sbjct: 180 ILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASK 239

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G   +  TYN  I  LC      K   LL RM  +   PNE+TY T+I+G V+ G+    
Sbjct: 240 GIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVA 299

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            +V   M       N   Y+TLI+G    G   +A++L   M+  G +PN V Y AL++G
Sbjct: 300 TKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNG 359

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L +  +      IL  M   G   +  +Y++++ G  ++G   +AV++  DM K +   +
Sbjct: 360 LYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPD 419

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V +SVLI+G    GK+  A+ +  +M   G  P+ + YS++I+  C  G ++EAL  + 
Sbjct: 420 VVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYA 479

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            M         D FT N+L+   C+   +  +   +N M   G DP+ VT +  +     
Sbjct: 480 VM--NHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGN 537

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
             +A +         A  +F +  + G F            P   T+  +++ LC    I
Sbjct: 538 SGDALK---------AFSVFDKMNSFGHF------------PSLFTYGGLLKGLCIGGHI 576

Query: 652 QAAI 655
             A+
Sbjct: 577 NEAL 580



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/546 (23%), Positives = 240/546 (43%), Gaps = 63/546 (11%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++++  ++EG    A + ++ +      N+LPN++T+N +I   C  G +  A++L 
Sbjct: 282 TYNTLISGFVREGKIEVATKVFDEM---SLFNLLPNSITYNTLIAGHCTTGNIGEALRLM 338

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             M      P+  TY  L++GL K         +L+ M++ G   + +++  +I+GLCKN
Sbjct: 339 DVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKN 398

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G L  A +L+D+M      P+ VT++ LI+G    G ++ A  ++ +M  +  +PN + Y
Sbjct: 399 GMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILY 458

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+I    K+G   +       M       + +  + L++   + GK E+A      M  
Sbjct: 459 STLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSR 518

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG--------- 446
            G  PN+V +  +I+G    G   +A  +  +M + G   + FTY  L+KG         
Sbjct: 519 MGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINE 578

Query: 447 ---FFE-----------------------SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
              FF                        SG    A+ +  +M  N+ + +   Y+ LI 
Sbjct: 579 ALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIA 638

Query: 481 GLCEDGKLREARMVWTQMLSRG-CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           GLC+ GK+  A ++  + + +G   P+   Y+S++ GL   G    AL +F EM  L   
Sbjct: 639 GLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEM--LNKD 696

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            +PD   +N++++   ++   S   D+L++M  +    +L T NI L             
Sbjct: 697 VEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYA--------- 747

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKC- 658
                       KR   +  F + + M++    P   +W  ++   C+ K    AI    
Sbjct: 748 ------------KRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKILR 795

Query: 659 WSNLYG 664
           W  L G
Sbjct: 796 WITLEG 801



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 144/628 (22%), Positives = 279/628 (44%), Gaps = 66/628 (10%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + T+ +L+     + +F  +  +L RMR     V   S+  +     K  ++EEA++L  
Sbjct: 350 EVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLD 409

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+ +      V +F+ ++N   + G  + A E    +       ++PN + ++ +I   
Sbjct: 410 DML-KVSVNPDVVTFSVLINGFFRVGKINNAKEI---MCKMYKTGLVPNGILYSTLIYNY 465

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C++G +  A+  +  M       D +T   L+   C+  +L+EA   ++ M   G  P  
Sbjct: 466 CKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNS 525

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNM--------------FLKG---------------- 292
           VTF+ +ING   +G+  +A  + D M               LKG                
Sbjct: 526 VTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHR 585

Query: 293 --CLPN---EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
             C+PN    V +NT +   C  GNL  A++L++ MV +  +P+  TY  +I GL K G+
Sbjct: 586 LRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGK 645

Query: 348 AVDGARVLMS---MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            V  A +L+S   +E+     N  +Y++L+ GL K G A  A+ ++++M+ K  +P+TV 
Sbjct: 646 IV--AALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVA 703

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           ++ +ID   R GK  +  +IL  M +     N  TY+ L+ G+ +     +   ++KDM 
Sbjct: 704 FNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMI 763

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           ++  + ++  +  LI G C+      A  +   +   G   D   ++ +I   C    ++
Sbjct: 764 RHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMK 823

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           +A +L  +M   +    P+V TYN L N L + S+   +  +L  +++ G  P   T   
Sbjct: 824 KAFELVKQM--NQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVP---TNKQ 878

Query: 585 FLTALK-----EKLEAPQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVML 627
           ++T +        ++      D +  L I             L   ++      ++++ML
Sbjct: 879 YITLINGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLML 938

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +  + P  +T+  ++   C+   +  A+
Sbjct: 939 EMQIIPTVATFTTLMHVYCKEANVAKAL 966



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 153/642 (23%), Positives = 258/642 (40%), Gaps = 116/642 (18%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRV---VLEKSFIFIFKAYGKAHLVEEAIRLF 141
            TF  LI  +   G   + + ++ +M +   V   +L  + I+    Y K   ++EA+  +
Sbjct: 422  TFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIY---NYCKMGYLKEALNAY 478

Query: 142  HTM------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
              M       D F C   V +F        + G    A  F NH+     M + PN++TF
Sbjct: 479  AVMNHSGHVADHFTCNVLVATF-------CRYGKLEEAEYFMNHM---SRMGLDPNSVTF 528

Query: 196  NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC----------------- 238
            + +I      G    A  +F +M      P ++TY  L+ GLC                 
Sbjct: 529  DCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRC 588

Query: 239  ------------------KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
                              +   L +A+ L++EM  +   P   T+  LI GLCK G++  
Sbjct: 589  IPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVA 648

Query: 281  AAKLVDNMFLKGCL-PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  L      KG L PN   Y +L+ GL   G+   A+ + + M+     P+ V +  II
Sbjct: 649  ALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVII 708

Query: 340  NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            +   + G+      +L +M+ +    N   Y+ L+ G  K         L+K M+  G  
Sbjct: 709  DQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFL 768

Query: 400  PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
            P+   + +LI G C+    D A +IL  +   G   + FT++ L+  F E  +  KA E+
Sbjct: 769  PDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFEL 828

Query: 460  WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
             K M +   + N   Y+ L +GL       +A  V   +L  G  P    Y ++I+G+C 
Sbjct: 829  VKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCR 888

Query: 520  AGSVEEALKLFNEM---------------------------------LCLEPKSQPDVFT 546
             G+++ A+KL +EM                                 L LE +  P V T
Sbjct: 889  VGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVAT 948

Query: 547  YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLN 604
            +  L++  CK++N++ +++L + M       D+V  N+ ++ L     +EA         
Sbjct: 949  FTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEA--------- 999

Query: 605  ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                           FK+ E M Q+ L P TS +  ++   C
Sbjct: 1000 --------------AFKLYEEMKQRDLWPNTSIYIVLIDSFC 1027



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/525 (23%), Positives = 222/525 (42%), Gaps = 42/525 (8%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            TF  +I  Y NSGD      V  +M          ++  + K       + EA++ FH +
Sbjct: 527  TFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRL 586

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                +    V  FN+ L    + G    A+   N +V     + LP+  T+  +I  +C+
Sbjct: 587  RCIPNAVDNV-IFNTKLTSTCRSGNLSDAIALINEMVTN---DFLPDNFTYTNLIAGLCK 642

Query: 205  LG---------------------------LVDN---------AIQLFREMPVRNCEPDIY 228
             G                           LVD          A+ +F EM  ++ EPD  
Sbjct: 643  KGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTV 702

Query: 229  TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
             +  ++D   ++ +  +   +L  M+         T+N+L++G  K   + R   L  +M
Sbjct: 703  AFNVIIDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDM 762

Query: 289  FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
               G LP++ ++++LI G C   + D A+ +L  +     + +  T+  +I    +    
Sbjct: 763  IRHGFLPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEM 822

Query: 349  VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                 ++  M +     N   Y+ L +GL +      A ++ + ++E G  P    Y  L
Sbjct: 823  KKAFELVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITL 882

Query: 409  IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
            I+G+CRVG    A ++  EM   G +++    S++++G   S K   A+ +   M +   
Sbjct: 883  INGMCRVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQI 942

Query: 469  VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
            +     ++ L+H  C++  + +A  + + M     K DVVAY+ +I GLC  G +E A K
Sbjct: 943  IPTVATFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFK 1002

Query: 529  LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
            L+ EM   +    P+   Y +L+++ C  +    S  LL  + DR
Sbjct: 1003 LYEEM--KQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDR 1045



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 125/279 (44%), Gaps = 4/279 (1%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            +++SLI  Y  S  F     +L  +  E  V+   +F  +   + + + +++A  L   M
Sbjct: 773  SWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQM 832

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             ++F     V ++N++ N +I+   +H+A      ++ +     +P    +  +I  +CR
Sbjct: 833  -NQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGS---VPTNKQYITLINGMCR 888

Query: 205  LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            +G +  A++L  EM              ++ GL    +++ A+ +LD M      PT  T
Sbjct: 889  VGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVAT 948

Query: 265  FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            F  L++  CK   + +A +L   M       + V YN LI GLC  G+++ A  L + M 
Sbjct: 949  FTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMK 1008

Query: 325  ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
                 PN   Y  +I+        ++  ++L  +++R+ 
Sbjct: 1009 QRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDIQDREL 1047



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 87/403 (21%), Positives = 154/403 (38%), Gaps = 75/403 (18%)

Query: 56   QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
             G+A++     +E+ N        +     F  +I  Y+  G    +  +L  M+ +   
Sbjct: 679  HGHARAALYIFEEMLNK-----DVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNLC 733

Query: 116  VLEKSFIFIFKAYGKAHLVEEAIRLFHTMV------DEFHCKRTV------KSFN---SV 160
                ++  +   Y K H +     L+  M+      D+F     +      KSF+    +
Sbjct: 734  FNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDVAIKI 793

Query: 161  LNVIIQEGLYHRALEF-YNHIVN--------------AKHMN---ILPNTLTFNLVIKTV 202
            L  I  EG  H    F +N ++                K MN   ++PN  T+N +   +
Sbjct: 794  LRWITLEG--HVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFNGL 851

Query: 203  CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
             R      A ++ + +      P    Y TL++G+C+   +  A+ L DEM+  G     
Sbjct: 852  IRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISSHN 911

Query: 263  VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            V  + ++ GL  + ++  A  ++D M     +P   T+ TL+H  C + N+ KA+ L   
Sbjct: 912  VAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSI 971

Query: 323  MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
            M       + V Y  +I+GL   G                           I   FK   
Sbjct: 972  MEHCHVKLDVVAYNVLISGLCANGD--------------------------IEAAFK--- 1002

Query: 383  AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
                  L+++M ++   PNT +Y  LID  C      E+E++L
Sbjct: 1003 ------LYEEMKQRDLWPNTSIYIVLIDSFCAGNYQIESEKLL 1039


>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
          Length = 726

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 163/581 (28%), Positives = 279/581 (48%), Gaps = 44/581 (7%)

Query: 45  VSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEM 104
           V S  Q+    +  A+ +   + E F    +   Y+     F  ++   +N+        
Sbjct: 89  VLSPPQVRAVLRAQARGDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARR 148

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           V+  M R       + F  +  +Y +A  +  A+R+ H M  +  C   +   N  +NV+
Sbjct: 149 VVRLMIRRGVRRGTEQFAQLMLSYSRAGKLRSAMRVLHLMQKD-GCAPDISICNMAVNVL 207

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
           +  G   +ALEF   +   + + + P+  T+N +IK +C    V +A+++   M    C 
Sbjct: 208 VVAGRVDKALEFAERM---RRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCP 264

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD-GCFPTPVTFNVLINGL----------- 272
           PD  +Y T+M  LCKE R++E   LL  M+ D G FP  VT+NVLI+GL           
Sbjct: 265 PDKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALE 324

Query: 273 ------------------------CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
                                   C NG +  A ++V  M  KGC P+ VTY+T++ G C
Sbjct: 325 FLRESEGKRFRVDEVGYSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFC 384

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G LD+A  ++  M  + C PN VT+  ++NGL K+G+  +   +L   EE  +  ++ 
Sbjct: 385 RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDI 444

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YS ++ G  +EGK +++  +  QM++KG  P TV  + LI  LC+  KP EA++ + + 
Sbjct: 445 TYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQC 504

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            + GC  N   +++++ GF   G    A+ +  DM  +N   + V Y+V++  L + G+L
Sbjct: 505 QSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRL 564

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           +EA  +  +ML+RG  P  V Y ++IH  C  G++E+ L L  +ML  +         YN
Sbjct: 565 KEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKS----AYN 620

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++  LC    ++ +  LL  ++      D  TC+I + + 
Sbjct: 621 QVVEKLCAFGKLNEAYSLLYKILRTASVRDAQTCHILMESF 661



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 230/495 (46%), Gaps = 21/495 (4%)

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           G   RA EF+            P    F+ ++  +    L D A ++ R M  R      
Sbjct: 105 GDVRRAFEFFRWADRQWRYRHAPEV--FDEMLSLLSNTRLHDPARRVVRLMIRRGVRRGT 162

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
             +  LM    +  +L  A+ +L  MQ DGC P     N+ +N L   G + +A +  + 
Sbjct: 163 EQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALEFAER 222

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   G  P+  TYN LI GLC    +  A+ ++  M+ + C P++++Y T+++ L K  R
Sbjct: 223 MRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKEKR 282

Query: 348 AVDGARVLMSME-ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
             +   +L  M  +     ++  Y+ LI GL K G A++A++  ++   K  + + V YS
Sbjct: 283 VEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYS 342

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           A++   C  G+  EA+EI+ EMI+ GC  +  TYS+++ GF   G+  +A ++ K M KN
Sbjct: 343 AIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKN 402

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
           +C  N V ++ L++GLC+ GK  EA  +  +       P  + YS ++HG    G ++E+
Sbjct: 403 DCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKES 462

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             +  +M  L+    P     N+L++ALCK    + + D +     +GC  ++V     +
Sbjct: 463 CDVVVQM--LQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVI 520

Query: 587 TALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFL 631
                + +  +     ++++ +                L K+ R      +VE ML + +
Sbjct: 521 HGFSRQGDL-ESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGV 579

Query: 632 SPQTSTWERVVQELC 646
            P   T+  V+   C
Sbjct: 580 LPTPVTYRTVIHRYC 594


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/557 (27%), Positives = 272/557 (48%), Gaps = 42/557 (7%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +F+S  +   Y      ++ +++  + +     +  ++  +R ++    E   + + K Y
Sbjct: 29  LFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTY 88

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           GK  + ++A+ +F  M + F C+  ++S+N++LN  ++   + +    + +   A    +
Sbjct: 89  GKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA---GV 145

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN  T+N++IK  C+    + A      M     +PD+++Y T+++ L K  +LD+A+ 
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD---------------NMFLKG- 292
           L DEM   G  P    +N+LI+G  K  +   A +L D               N+ + G 
Sbjct: 206 LFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGL 265

Query: 293 --------CLP-------NE-----VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
                   CL        NE      TY++LIHGLC  GN+DKA S+ + +   K   + 
Sbjct: 266 SKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDV 325

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY T++ G  + G+  +   +   ME +   VN   Y+ LI GL + GK ++A  +W+ 
Sbjct: 326 VTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRL 384

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M  KG   +   Y   I GLC  G  ++A  ++ E+ ++G   + + Y+S++    +  +
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A  + K+M+K+    N    + LI GL  D +L EA     +M   GC+P VV+Y+ 
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I GLC AG   EA     EM  LE   +PD+ TY+ILL  LC+   I  +++L +  + 
Sbjct: 505 LICGLCKAGKFGEASAFVKEM--LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562

Query: 573 RGCDPDLVTCNIFLTAL 589
            G + D++  NI +  L
Sbjct: 563 SGLETDVMMHNILIHGL 579



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 156/612 (25%), Positives = 285/612 (46%), Gaps = 56/612 (9%)

Query: 22  MKTLSLTTIPSE------RSHRFFSVRSAVSSNKQME---TEPQGNAKSEQPFSD-EIFN 71
           +KT    ++P +      R    F    A+ S   +     E +   K E  F+  E   
Sbjct: 85  IKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144

Query: 72  STPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKA 131
             P L +Y +       LI+      +F+     L  M +E       S+  +     KA
Sbjct: 145 VAPNLQTYNV-------LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKA 197

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
             +++A+ LF  M  E      V  +N +++  ++E  +  A+E ++ ++  +  ++ PN
Sbjct: 198 GKLDDALELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL--EDSSVYPN 254

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             T N++I  + + G VD+ ++++  M     E D+YTY +L+ GLC    +D+A  + +
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314

Query: 252 EMQ-----VD--------GCF---------------------PTPVTFNVLINGLCKNGE 277
           E+      +D        G F                        V++N+LI GL +NG+
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGK 374

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +  A  +   M  KG   ++ TY   IHGLC+ G ++KA+ ++  + +S    +   Y +
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           II+ L K  R  + + ++  M +    +N ++ + LI GL ++ +  +A    ++M + G
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           C+P  V Y+ LI GLC+ GK  EA   + EM+ NG   +  TYS L+ G     K   A+
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E+W    ++    + + +++LIHGLC  GKL +A  V   M  R C  ++V Y++++ G 
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
              G    A  ++  M   +   QPD+ +YN ++  LC    +S++++  +   + G  P
Sbjct: 615 FKVGDSNRATVIWGYM--YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672

Query: 578 DLVTCNIFLTAL 589
            + T NI + A+
Sbjct: 673 TVYTWNILVRAV 684



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 230/475 (48%), Gaps = 21/475 (4%)

Query: 198 VIKTVCRLGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           VIKT  +  + D A+ +F+ M  +  CEP I +Y TL++   +  +  +   L    +  
Sbjct: 84  VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P   T+NVLI   CK  E  +A   +D M+ +G  P+  +Y+T+I+ L   G LD A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-EERKFHVNEYIYSTLIS 375
           + L D M      P+   Y  +I+G +K         +   + E+   + N   ++ +IS
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL K G+ +D +K+W++M +   + +   YS+LI GLC  G  D+AE +  E+     + 
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  TY++++ GF   GK  +++E+W+ M   N V N V Y++LI GL E+GK+ EA M+W
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIW 382

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M ++G   D   Y   IHGLC  G V +AL +  E+         DV+ Y  +++ LC
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE--SSGGHLDVYAYASIIDCLC 440

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE---------- 605
           K+  +  + +L+  M   G + +   CN  +  L       +  + FL E          
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE-ASFFLREMGKNGCRPTV 499

Query: 606 -----LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                L   L K  +       V+ ML+    P   T+  ++  LCR ++I  A+
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 204/412 (49%), Gaps = 5/412 (1%)

Query: 108 RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE 167
           RM++ +R     ++  +      A  V++A  +F+ + DE      V ++N++L    + 
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL-DERKASIDVVTYNTMLGGFCRC 338

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           G    +LE +  + +   +NI+    ++N++IK +   G +D A  ++R MP +    D 
Sbjct: 339 GKIKESLELWRIMEHKNSVNIV----SYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            TY   + GLC    +++A+ ++ E++  G       +  +I+ LCK   L  A+ LV  
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   G   N    N LI GL     L +A   L  M  + C P  V+Y  +I GL K G+
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             + +  +  M E  +  +   YS L+ GL ++ K + A++LW Q ++ G + + ++++ 
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI GLC VGK D+A  ++  M +  C AN  TY++LM+GFF+ G  ++A  IW  M K  
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
              + + Y+ ++ GLC    +  A   +    + G  P V  ++ ++  + N
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 247/498 (49%), Gaps = 29/498 (5%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           N +L  +++   + +  E ++ +       + P+   F   I   C+ G V+ A++LF +
Sbjct: 243 NILLTSLVRANEFQKCCEAFDVVCKG----VSPDVYLFTTAINAFCKGGKVEEAVKLFSK 298

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M      P++ T+ T++DGL    R DEA +  ++M   G  PT +T+++L+ GL +   
Sbjct: 299 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 358

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +G A  ++  M  KG  PN + YN LI      G+L+KA+ + D MV+        TY T
Sbjct: 359 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 418

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I G  K G+A +  R+L  M    F+VN+  ++++I  L      + A++   +M+ + 
Sbjct: 419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 478

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P   + + LI GLC+ GK  +A E+ F+ +N G   +  T ++L+ G  E+GK  +A 
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 538

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            I K++    CV + V Y+ LI G C   KL EA M   +M+ RG KPD   YS +I GL
Sbjct: 539 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 598

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
            N   VEEA++ +++  C      PDV+TY+++++  CK        +  + MM +   P
Sbjct: 599 FNMNKVEEAIQFWDD--CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTS 636
           + V  N                        IR + R  R S   ++ E M  K +SP ++
Sbjct: 657 NTVVYNHL----------------------IRAYCRSGRLSMALELREDMKHKGISPNSA 694

Query: 637 TWERVVQELCRPKRIQAA 654
           T+  +++ +    R++ A
Sbjct: 695 TYTSLIKGMSIISRVEEA 712



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 231/455 (50%), Gaps = 9/455 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N++++  I+ G  ++A+E  + +V +K +++  +T  +N +IK  C+ G  DNA +L +
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMV-SKGLSLTSST--YNTLIKGYCKNGQADNAERLLK 437

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM       +  ++ +++  LC     D A+  + EM +    P       LI+GLCK+G
Sbjct: 438 EMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 497

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +  +A +L      KG + +  T N L+HGLC  G LD+A  +   ++   C+ + V+Y 
Sbjct: 498 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 557

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+I+G     +  +    L  M +R    + Y YS LI GLF   K E+A++ W      
Sbjct: 558 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 617

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+   YS +IDG C+  + +E +E   EM++     N   Y+ L++ +  SG+   A
Sbjct: 618 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 677

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           +E+ +DM       N   Y+ LI G+    ++ EA++++ +M   G +P+V  Y+++I G
Sbjct: 678 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 737

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
               G + +   L  EM        P+  TY +++    +  N++ +  LLN M ++G  
Sbjct: 738 YGKLGQMVKVECLLREMH--SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 795

Query: 577 PDLVTCNIFLTALKEK---LEAPQDGTDFLNELAI 608
           PD +T   F+    ++   LEA + G+D  N  AI
Sbjct: 796 PDSITYKEFIYGYLKQGGVLEAFK-GSDEENYAAI 829



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 224/459 (48%), Gaps = 6/459 (1%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F     A+ K   VEEA++LF  M +E      V +FN+V++ +   G Y  A  F   +
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V      + P  +T+++++K + R   + +A  + +EM  +   P++  Y  L+D   + 
Sbjct: 335 V---ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 391

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             L++A+ + D M   G   T  T+N LI G CKNG+   A +L+  M   G   N+ ++
Sbjct: 392 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
            ++I  LC     D A+  +  M+     P      T+I+GL K G+      +      
Sbjct: 452 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 511

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           + F V+    + L+ GL + GK ++A ++ K+++ +GC  + V Y+ LI G C   K DE
Sbjct: 512 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 571

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A   L EM+  G   + +TYS L+ G F   K  +A++ W D  +N  + +   YSV+I 
Sbjct: 572 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 631

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C+  +  E +  + +M+S+  +P+ V Y+ +I   C +G +  AL+L  +M       
Sbjct: 632 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM--KHKGI 689

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            P+  TY  L+  +   S +  +  L   M   G +P++
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 728



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 197/410 (48%), Gaps = 6/410 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVD-EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
           + K Y K    + A RL   M+   F+  +   SF SV+ ++    ++  AL F   ++ 
Sbjct: 419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQG--SFTSVICLLCSHLMFDSALRFVGEML- 475

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
               N+ P       +I  +C+ G    A++L+ +   +    D  T   L+ GLC+  +
Sbjct: 476 --LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 533

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           LDEA  +  E+   GC    V++N LI+G C   +L  A   +D M  +G  P+  TY+ 
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 593

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI GL     +++A+   D    +  +P+  TY  +I+G  K  R  +G      M  + 
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              N  +Y+ LI    + G+   A++L + M  KG  PN+  Y++LI G+  + + +EA+
Sbjct: 654 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 713

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +  EM   G   N F Y++L+ G+ + G+  K   + ++M   N   N++ Y+V+I G 
Sbjct: 714 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 773

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             DG + EA  +  +M  +G  PD + Y   I+G    G V EA K  +E
Sbjct: 774 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 153/524 (29%), Positives = 254/524 (48%), Gaps = 7/524 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKR-VVLEKSFIFIFK 126
           + F    K  +YQ   ST+ +LI        +  +  ++  M R    VV       + +
Sbjct: 108 QFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIR 167

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             G A ++ +AI +F+  +    C+ T +++NS++ ++I EG Y +  E YN + N  H 
Sbjct: 168 MLGNAKMIGKAITIFYQ-IKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHC 226

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
              P+T+T++ +I   C+LG  D+AI+L  EM     +P    Y  ++    K + +  A
Sbjct: 227 Q--PDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGA 284

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L +EM+   C P   T+  LI GL K G +  A      M  +GC P+ V  N +I+ 
Sbjct: 285 LSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINF 344

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHV 365
           L   G LD  + L + M  S C+PN VTY TII  L +   R  +       M+      
Sbjct: 345 LGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP 404

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS LI G  K  + E AM L ++M EKG  P    Y +LID L +  + D A E+ 
Sbjct: 405 SPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+  N  +++A  Y+ ++K   ++G+   A+ ++ +M+K  C  N   Y+ L+ GL   
Sbjct: 465 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARA 524

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
             L EA     +M   GC PD+ +Y+ +++GL   G    A+++   M       +PD  
Sbjct: 525 CMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMK--NSTIKPDAV 582

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +YN +L+AL        + +L+  M   G + DL+T +  L A+
Sbjct: 583 SYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAI 626



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 11/337 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE----KRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           T+  LI+    +G         + M+RE      VV+     F+    GKA  +++ ++L
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFL----GKAGRLDDGLKL 357

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M    HC   V ++N+++  + +     R  E ++     K   I P+  T++++I 
Sbjct: 358 FEEM-GVSHCIPNVVTYNTIIKALFESK--SRVSEVFSWFERMKGSGISPSPFTYSILID 414

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C+   ++ A+ L  EM  +   P    YC+L+D L K  R D A  L  E++ +    
Sbjct: 415 GFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 474

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +   + V+I  L K G L  A  L D M   GC PN   YN L+ GL     LD+A++ +
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTM 534

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            +M    C+P+  +Y  I+NGL K G       +L +M+      +   Y+T++S L   
Sbjct: 535 RKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHA 594

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           G  E+A +L K+M   G + + + YS++++ + +V +
Sbjct: 595 GMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 155/362 (42%), Gaps = 65/362 (17%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASK---CMPNEVTYGTIINGLVKL-GRAVDGARV 354
           TY  LIH L L     +   ++  MV S      P E++    + G  K+ G+A+    +
Sbjct: 125 TYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAIT---I 181

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLC 413
              ++ RK       Y+++I  L  EG+ E   +L+ +M  +G C+P+TV YSALI   C
Sbjct: 182 FYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFC 241

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           ++G+ D A  +L EM  NG    A  Y+ ++  FF+    H A+ ++++M          
Sbjct: 242 KLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEM---------- 291

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
                             R ++       C+PDV  Y+ +I GL  AG ++EA   ++EM
Sbjct: 292 ------------------RYMY-------CRPDVFTYTELIRGLGKAGRIDEAYHFYHEM 326

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
                  +PD    N ++N L K   +   + L   M    C P++VT N  + AL E  
Sbjct: 327 Q--REGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFE-- 382

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                              + R S  F   E M    +SP   T+  ++   C+  RI+ 
Sbjct: 383 ------------------SKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEK 424

Query: 654 AI 655
           A+
Sbjct: 425 AM 426


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 162/555 (29%), Positives = 283/555 (50%), Gaps = 34/555 (6%)

Query: 58  NAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSL---IQHYANSGDFKSLEMVLYRMRREKR 114
           N K++ P    +FN   K  S Q    T  SL   +     S D ++ + +++    + +
Sbjct: 88  NLKNDYPLVLNLFNWA-KSQSQQQFHPTLESLCIVVHLSVASNDIQTAKRLVFEFCAKPK 146

Query: 115 VVLEKSF-------IFIFKAYGKAHLV--------------EEAIRLFHTMVDEFHCKRT 153
           + + KSF       I+ +K +G   LV               EA +LFH ++  +    +
Sbjct: 147 IDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLEAQKLFHKLL-RYGVVVS 205

Query: 154 VKSFNSVLNVII--QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           V S N  L+ +    EG+   A++ +        + +  NT++ N+V+  +C+LG V  A
Sbjct: 206 VDSCNLFLSRLSCNFEGI-KIAVKVFEEF---PELGVCWNTVSCNIVLHCLCQLGKVREA 261

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
             L  +M  R   PD+ +Y  ++ G C+   LD+ + L+DE++  G  P    +N +I  
Sbjct: 262 HNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILL 321

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCKNGE+  A +L+  M   G  P+ V Y T+I G C  GN+  A  L D M   K +P+
Sbjct: 322 LCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPD 381

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY ++I+G+ K G+ V+   +   M  +    +E  Y+ LI G  K G+ ++A  +  
Sbjct: 382 IVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHN 441

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           QM++KG  PN V Y+AL DGLC+ G+ D A E+L EM   G   N +TY++++ G  + G
Sbjct: 442 QMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIG 501

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              + V++ ++M       + + Y+ L+   C+ G++ +A  +   ML++  +P +V ++
Sbjct: 502 NIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFN 561

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +++G C +G +E+  +L   M  LE    P+  T+N L+   C ++N+  + ++  +M 
Sbjct: 562 VLMNGFCMSGMLEDGERLIEWM--LEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMH 619

Query: 572 DRGCDPDLVTCNIFL 586
           DRG  PD  T NI +
Sbjct: 620 DRGVMPDSNTYNILI 634



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/388 (31%), Positives = 197/388 (50%), Gaps = 2/388 (0%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   + P+ + +  VI   C+LG V  A +LF EM  +   PDI TY +++ G+CK  ++
Sbjct: 339 RKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKM 398

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  + +EM V G  P  VT+  LI+G CK GE+  A  + + M  KG  PN VTY  L
Sbjct: 399 VEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTAL 458

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
             GLC  G +D A  LL  M      PN  TY TI+NGL K+G      +++  M+   F
Sbjct: 459 ADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGF 518

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
           + +   Y+TL+    K G+   A +L + M+ K  +P  V ++ L++G C  G  ++ E 
Sbjct: 519 YPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGER 578

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++  M+  G   NA T++SLMK +          EI+K M     + +   Y++LI G C
Sbjct: 579 LIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHC 638

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           +   ++EA  +  +M+ +G       Y ++I G        EA KLF EM      ++ D
Sbjct: 639 KARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKD 698

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMM 571
           +  Y+I ++   ++ N   +++L +  M
Sbjct: 699 I--YDIFVDVNYEEGNWEITLELCDEFM 724



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 194/397 (48%), Gaps = 2/397 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+   +N +I  +C+ G V  A QL R M      PD   Y T++ G CK   +  A  L
Sbjct: 310 PDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKL 369

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            DEM+     P  VT+  +I+G+CK+G++  A ++ + M +KG  P+EVTY  LI G C 
Sbjct: 370 FDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCK 429

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G + +A S+ ++MV     PN VTY  + +GL K G       +L  M  +    N Y 
Sbjct: 430 AGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYT 489

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+T+++GL K G  E  +KL ++M   G  P+T+ Y+ L+D  C++G+  +A E+L  M+
Sbjct: 490 YNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIML 549

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           N        T++ LM GF  SG       + + M +   + N   ++ L+   C    +R
Sbjct: 550 NKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMR 609

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
               ++  M  RG  PD   Y+ +I G C A +++EA  L  EM  +E        TY+ 
Sbjct: 610 ATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEM--VEKGYSVTAATYDA 667

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L+    K+     +  L   M   G   +    +IF+
Sbjct: 668 LIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 225/479 (46%), Gaps = 52/479 (10%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL-CKENRLDEAVLL 249
           + L F+L  + +   G V  A +LF ++        + +    +  L C    +  AV +
Sbjct: 170 HPLVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKV 229

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            +E    G     V+ N++++ LC+ G++  A  L+  M  +G  P+ V+Y  ++ G C 
Sbjct: 230 FEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCR 289

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G LDK + L+D +      P+E                                   YI
Sbjct: 290 IGELDKVLKLVDELKGKGLKPDE-----------------------------------YI 314

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ +I  L K G+  +A +L + M + G  P+ VVY+ +I G C++G    A ++  EM 
Sbjct: 315 YNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMR 374

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                 +  TY+S++ G  +SGK  +A E++ +M       +EV Y+ LI G C+ G+++
Sbjct: 375 RKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMK 434

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  V  QM+ +G  P+VV Y+++  GLC  G ++ A +L +EM       QP+V+TYN 
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS--RKGLQPNVYTYNT 492

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA---LKEKLEAPQDGTDFLNE- 605
           ++N LCK  NI  ++ L+  M   G  PD +T    + A   + E  +A +     LN+ 
Sbjct: 493 IVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKR 552

Query: 606 LAIRLFKRQRTSGGF----------KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           L   L        GF          +++E ML+K + P  +T+  ++++ C    ++A 
Sbjct: 553 LQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRAT 611



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 190/436 (43%), Gaps = 64/436 (14%)

Query: 226 DIYTYCTLMDGLCKENRLD--EAVLLLDEMQV---DGCFPTPVTFNVLINGLCKNGELGR 280
           DI T   L+   C + ++D  ++  L  EM +         P+ F++    L +NG +  
Sbjct: 130 DIQTAKRLVFEFCAKPKIDVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFVLE 189

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGL-CLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           A KL   +   G + +  + N  +  L C    +  AV + +         N V+   ++
Sbjct: 190 AQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVL 249

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           + L +LG+  +   +L+ M +R    +   Y  ++SG  + G+ +  +KL  ++  KG K
Sbjct: 250 HCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLK 309

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+  +Y+ +I  LC+ G+  EAE++L                                  
Sbjct: 310 PDEYIYNNIILLLCKNGEVVEAEQLL---------------------------------- 335

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            + M K     + V Y+ +I G C+ G +  A  ++ +M  +   PD+V Y+S+IHG+C 
Sbjct: 336 -RGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICK 394

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           +G + EA ++FNEML      +PD  TY  L++  CK   +  +  + N M+ +G  P++
Sbjct: 395 SGKMVEAREMFNEMLV--KGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNV 452

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
           VT     TAL + L       D  NEL                +  M +K L P   T+ 
Sbjct: 453 VT----YTALADGL-CKNGEIDVANEL----------------LHEMSRKGLQPNVYTYN 491

Query: 640 RVVQELCRPKRIQAAI 655
            +V  LC+   I+  +
Sbjct: 492 TIVNGLCKIGNIEQTV 507



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 149/362 (41%), Gaps = 39/362 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ S+I     SG       +   M  +     E ++  +   Y KA  ++EA  + + M
Sbjct: 384 TYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQM 443

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +      V ++ ++ + + + G    A E   H ++ K +   PN  T+N ++  +C+
Sbjct: 444 VQK-GLTPNVVTYTALADGLCKNGEIDVANELL-HEMSRKGLQ--PNVYTYNTIVNGLCK 499

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G ++  ++L  EM +    PD  TY TLMD  CK   + +A  LL  M      PT VT
Sbjct: 500 IGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVT 559

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT------------------------- 299
           FNVL+NG C +G L    +L++ M  KG +PN  T                         
Sbjct: 560 FNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMH 619

Query: 300 ----------YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
                     YN LI G C   N+ +A  L   MV         TY  +I G  K  + V
Sbjct: 620 DRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFV 679

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +  ++   M +      + IY   +   ++EG  E  ++L  + M +      VVY    
Sbjct: 680 EARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIFVVYICFF 739

Query: 410 DG 411
            G
Sbjct: 740 IG 741


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 247/498 (49%), Gaps = 29/498 (5%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           N +L  +++   + +  E ++ +       + P+   F   I   C+ G V+ A++LF +
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKG----VSPDVYLFTTAINAFCKGGKVEEAVKLFSK 285

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M      P++ T+ T++DGL    R DEA +  ++M   G  PT +T+++L+ GL +   
Sbjct: 286 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 345

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +G A  ++  M  KG  PN + YN LI      G+L+KA+ + D MV+        TY T
Sbjct: 346 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 405

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I G  K G+A +  R+L  M    F+VN+  ++++I  L      + A++   +M+ + 
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P   + + LI GLC+ GK  +A E+ F+ +N G   +  T ++L+ G  E+GK  +A 
Sbjct: 466 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 525

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            I K++    CV + V Y+ LI G C   KL EA M   +M+ RG KPD   YS +I GL
Sbjct: 526 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 585

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
            N   VEEA++ +++  C      PDV+TY+++++  CK        +  + MM +   P
Sbjct: 586 FNMNKVEEAIQFWDD--CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 643

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTS 636
           + V  N                        IR + R  R S   ++ E M  K +SP ++
Sbjct: 644 NTVVYNHL----------------------IRAYCRSGRLSMALELREDMKHKGISPNSA 681

Query: 637 TWERVVQELCRPKRIQAA 654
           T+  +++ +    R++ A
Sbjct: 682 TYTSLIKGMSIISRVEEA 699



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 232/455 (50%), Gaps = 9/455 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N++++  I+ G  ++A+E  + +V +K +++  +T  +N +IK  C+ G  DNA +L +
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMV-SKGLSLTSST--YNTLIKGYCKNGQADNAERLLK 424

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM       +  ++ +++  LC     D A+  + EM +    P       LI+GLCK+G
Sbjct: 425 EMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 484

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +  +A +L      KG + +  T N L+HGLC  G LD+A  +   ++   C+ + V+Y 
Sbjct: 485 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 544

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+I+G     +  +    L  M +R    + Y YS LI GLF   K E+A++ W      
Sbjct: 545 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 604

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+   YS +IDG C+  + +E +E   EM++     N   Y+ L++ +  SG+   A
Sbjct: 605 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 664

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           +E+ +DM       N   Y+ LI G+    ++ EA++++ +M   G +P+V  Y+++I G
Sbjct: 665 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
               G + +   L  EM        P+  TY +++    +  N++ +  LLN M ++G  
Sbjct: 725 YGKLGQMVKVECLLREMH--SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 782

Query: 577 PDLVTCNIFLTA-LKEK--LEAPQDGTDFLNELAI 608
           PD +T   F+   LK+   LEA + G+D  N  AI
Sbjct: 783 PDSITYKEFIYGYLKQGGVLEAFK-GSDEENYAAI 816



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 224/459 (48%), Gaps = 6/459 (1%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F     A+ K   VEEA++LF  M +E      V +FN+V++ +   G Y  A  F   +
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 321

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V      + P  +T+++++K + R   + +A  + +EM  +   P++  Y  L+D   + 
Sbjct: 322 V---ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 378

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             L++A+ + D M   G   T  T+N LI G CKNG+   A +L+  M   G   N+ ++
Sbjct: 379 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 438

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
            ++I  LC     D A+  +  M+     P      T+I+GL K G+      +      
Sbjct: 439 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 498

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           + F V+    + L+ GL + GK ++A ++ K+++ +GC  + V Y+ LI G C   K DE
Sbjct: 499 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 558

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A   L EM+  G   + +TYS L+ G F   K  +A++ W D  +N  + +   YSV+I 
Sbjct: 559 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 618

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C+  +  E +  + +M+S+  +P+ V Y+ +I   C +G +  AL+L  +M       
Sbjct: 619 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM--KHKGI 676

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            P+  TY  L+  +   S +  +  L   M   G +P++
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 197/410 (48%), Gaps = 6/410 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVD-EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
           + K Y K    + A RL   M+   F+  +   SF SV+ ++    ++  AL F   ++ 
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQG--SFTSVICLLCSHLMFDSALRFVGEML- 462

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
               N+ P       +I  +C+ G    A++L+ +   +    D  T   L+ GLC+  +
Sbjct: 463 --LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 520

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           LDEA  +  E+   GC    V++N LI+G C   +L  A   +D M  +G  P+  TY+ 
Sbjct: 521 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 580

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI GL     +++A+   D    +  +P+  TY  +I+G  K  R  +G      M  + 
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              N  +Y+ LI    + G+   A++L + M  KG  PN+  Y++LI G+  + + +EA+
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +  EM   G   N F Y++L+ G+ + G+  K   + ++M   N   N++ Y+V+I G 
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             DG + EA  +  +M  +G  PD + Y   I+G    G V EA K  +E
Sbjct: 761 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/456 (30%), Positives = 227/456 (49%), Gaps = 2/456 (0%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ +    + E  C     S+N +L  +  E     ALE  + + + +  +  PN +
Sbjct: 145 VGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVV 204

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           +++ VI      G VD    LF EM  R   PD+ TY T++DGLCK    D A  +  +M
Sbjct: 205 SYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQM 264

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P   T+N LI+G    G+     ++++ M   G  PN  TY +L++ LC  G  
Sbjct: 265 IDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRC 324

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A    D M+     P+  TYG +++G    G   +   +L  M       N +I++  
Sbjct: 325 REARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIF 384

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
            S   K G  + AM ++ +M ++G  P+ V Y ALID LC++G+ D+AE    +MIN G 
Sbjct: 385 FSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV 444

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +   +SSL+ G     K  K  E++ +M       N V ++ ++  LC++G++ E + 
Sbjct: 445 TPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQR 504

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   +   G +PDV++Y+++I G C AG+++EA KL   M+ +  K  PD F+YN LL+ 
Sbjct: 505 LVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLK--PDSFSYNTLLHG 562

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            CK   I  +      M+  G  P +VT N  L  L
Sbjct: 563 YCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGL 598



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 151/495 (30%), Positives = 243/495 (49%), Gaps = 13/495 (2%)

Query: 100 KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE--FHCKRTVKSF 157
           ++++++L RM     +    S+  + K        EEA+ L H M D+  + C   V S+
Sbjct: 147 EAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSY 206

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           ++V+N    EG   +    YN  +      I P+ +T+  VI  +C+  L D A  +F++
Sbjct: 207 STVINGFFTEGQVDKP---YNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQ 263

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M     +P+I TY  L+ G     +  E V +L+EM   G  P   T+  L+N LCKNG 
Sbjct: 264 MIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGR 323

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
              A    D+M  KG  P+  TY  ++HG   KG L +   LL+ MVA+   PN   +  
Sbjct: 324 CREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNI 383

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
             +   K G       +   M ++    +   Y  LI  L K G+ +DA   + QM+ +G
Sbjct: 384 FFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEG 443

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK---GH 454
             P+ VV+S+L+ GLC V K ++ EE+ FEM+N G   N   +++++    + G+   G 
Sbjct: 444 VTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQ 503

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           + V+  + M     V   + Y+ LI G C  G + EA  +   M+S G KPD  +Y++++
Sbjct: 504 RLVDSIECMGVRPDV---ISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           HG C AG ++ A   F +M  L     P V TYN +L+ L +    S + +L  +M++ G
Sbjct: 561 HGYCKAGRIDSAYSHFRKM--LSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618

Query: 575 CDPDLVTCNIFLTAL 589
              D+ T NI L  L
Sbjct: 619 TKWDIYTYNIILNGL 633



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/520 (25%), Positives = 240/520 (46%), Gaps = 62/520 (11%)

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF------------------ 215
           +  +N +V   ++ + PN  T++++I   CR+G +++    F                  
Sbjct: 76  VSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQL 135

Query: 216 ------------------REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM---Q 254
                             + MP   C PD  +Y  L+ GLC E R +EA+ LL  M   Q
Sbjct: 136 LNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQ 195

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           V  C P  V+++ +ING    G++ +   L   M  +G  P+ VTY T+I GLC     D
Sbjct: 196 VWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFD 255

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A ++  +M+ +   PN  TY  +I+G + +G+  +  R+L  M       N   Y +L+
Sbjct: 256 RAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLL 315

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           + L K G+  +A   +  M+ KG KP+   Y  ++ G    G   E  ++L  M+ NG +
Sbjct: 316 NYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGIS 375

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N   ++     + + G   KA++I+  M +     + V Y  LI  LC+ G++ +A + 
Sbjct: 376 PNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVK 435

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           + QM++ G  PD+V +SS+++GLC     E+  +LF EML +     P++  +N +L  L
Sbjct: 436 FNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNV--GIHPNIVFFNTILCNL 493

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           CK+  +     L++S+   G  PD+++ N  +           DG      +        
Sbjct: 494 CKEGRVMEGQRLVDSIECMGVRPDVISYNTLI-----------DGHCLAGTI-------- 534

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                 K++E M+   L P + ++  ++   C+  RI +A
Sbjct: 535 --DEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSA 572



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/572 (24%), Positives = 262/572 (45%), Gaps = 75/572 (13%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+  ++  YA  G    +  +L  M           F   F AY K  ++++A+ +F+ 
Sbjct: 344 TTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNK 403

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M  +      V S+ ++++ + + G    A   +N ++N     + P+ + F+ ++  +C
Sbjct: 404 MRQQGLSPDAV-SYGALIDALCKLGRVDDAEVKFNQMINE---GVTPDIVVFSSLVYGLC 459

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
            +   +   +LF EM      P+I  + T++  LCKE R+ E   L+D ++  G  P  +
Sbjct: 460 TVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVI 519

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           ++N LI+G C  G +  A+KL++ M   G  P+  +YNTL+HG C  G +D A S   +M
Sbjct: 520 SYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKM 579

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL------ 377
           +++   P  VTY TI++GL +  R  +   + ++M       + Y Y+ +++GL      
Sbjct: 580 LSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCV 639

Query: 378 -----------------------------FKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                                         K G+ EDAM L+  +   G   N V Y  +
Sbjct: 640 DEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLV 699

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA------------ 456
           ++ L   G  +E + +   M  NG A N+   ++L++     G   +A            
Sbjct: 700 VENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNF 759

Query: 457 ----------VEIW---------KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
                     + I+         K + K   + NE   S LI    +  ++ +A  ++ +
Sbjct: 760 SVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIK---KARRIDDAYSLFRE 816

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           ML +G  PDVV Y++++HGL   G   EA +L+  M+    ++Q +++TYNI+LN LCK 
Sbjct: 817 MLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI--NSRTQMNIYTYNIILNGLCKS 874

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + +  +  +  S+  +G   +++T NI + AL
Sbjct: 875 NCVDEAFKMFQSLCSKGLQLNIITFNIMIGAL 906



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 127/526 (24%), Positives = 253/526 (48%), Gaps = 13/526 (2%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA   F +M+ +   K +V ++  +L+    +G      +  N +V      I PN   F
Sbjct: 326 EARFFFDSMIGK-GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN---GISPNHHIF 381

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N+      + G++D A+ +F +M  +   PD  +Y  L+D LCK  R+D+A +  ++M  
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
           +G  P  V F+ L+ GLC   +  +  +L   M   G  PN V +NT++  LC +G + +
Sbjct: 442 EGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVME 501

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
              L+D +      P+ ++Y T+I+G    G   + +++L  M       + + Y+TL+ 
Sbjct: 502 GQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLH 561

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G  K G+ + A   +++M+  G  P  V Y+ ++ GL +  +  EA+E+   MIN+G   
Sbjct: 562 GYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKW 621

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           + +TY+ ++ G  +S    +A+++++++       N + ++++I  L + G+  +A  ++
Sbjct: 622 DIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLF 681

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             + + G   +VV Y  ++  L   GS+EE   LF+ M   +  + P+    N L+  L 
Sbjct: 682 AAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAM--EKNGTAPNSQMLNALVRRLL 739

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-----KEKLEAPQDGTDFLNEL--AI 608
            + +IS +   L+ + +R    +  T ++ ++       +   ++       LNE   + 
Sbjct: 740 HRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSA 799

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            + K +R    + +   ML K L+P   T+  ++  L +  R   A
Sbjct: 800 LIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 845



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 144/578 (24%), Positives = 256/578 (44%), Gaps = 57/578 (9%)

Query: 115  VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
            +V+  S ++      K   VEE   LF  M++       +  FN++L  + +EG   R +
Sbjct: 448  IVVFSSLVYGLCTVDKWEKVEE---LFFEMLN-VGIHPNIVFFNTILCNLCKEG---RVM 500

Query: 175  EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
            E    + + + M + P+ +++N +I   C  G +D A +L   M     +PD ++Y TL+
Sbjct: 501  EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 235  DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             G CK  R+D A     +M  +G  P  VT+N +++GL +      A +L  NM   G  
Sbjct: 561  HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620

Query: 295  PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
             +  TYN +++GLC    +D+A+ +   + +     N +T+  +I  L+K GR  D   +
Sbjct: 621  WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDL 680

Query: 355  LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              ++       N   Y  ++  L +EG  E+   L+  M + G  PN+ + +AL+  L  
Sbjct: 681  FAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 740

Query: 415  VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH-------------------- 454
             G    A   L ++     +  A T S L+  F      H                    
Sbjct: 741  RGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSAL 800

Query: 455  --------KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
                     A  ++++M       + V Y+ ++HGL + G+  EA+ ++  M++   + +
Sbjct: 801  IKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMN 860

Query: 507  VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            +  Y+ +++GLC +  V+EA K+F + LC     Q ++ T+NI++ AL K      ++DL
Sbjct: 861  IYTYNIILNGLCKSNCVDEAFKMF-QSLC-SKGLQLNIITFNIMIGALLKGGRKEDAMDL 918

Query: 567  LNSMMDRGCDPDLVTC-----------------NIFLTALKEKLEAPQDGTDFLNELAIR 609
              ++   G  PD+VT                   +FLT   EK   P D +  LN L  R
Sbjct: 919  FAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTM--EKSGTPLD-SRLLNALVRR 975

Query: 610  LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            L +R   S     +  + +K  S + ST   ++    R
Sbjct: 976  LLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSR 1013



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 81/366 (22%), Positives = 148/366 (40%), Gaps = 34/366 (9%)

Query: 120  SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
            +F  +  A  K    E+A+ LF   +      + V ++  V+  +I+EG    +LE ++ 
Sbjct: 660  TFNIMIGALLKGGRKEDAMDLF-AAIPANGLVQNVVTYRLVVENLIEEG----SLEEFDS 714

Query: 180  IVNAKHMN-ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            + +A   N   PN+   N +++ +   G +  A     ++  RN   +  T   L+    
Sbjct: 715  LFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFS 774

Query: 239  ----------------------------KENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
                                        K  R+D+A  L  EM + G  P  VT+N +++
Sbjct: 775  SDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 834

Query: 271  GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            GL + G    A +L  +M       N  TYN +++GLC    +D+A  +   + +     
Sbjct: 835  GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQL 894

Query: 331  NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
            N +T+  +I  L+K GR  D   +  ++       +   Y  +   L +EG  E+   L+
Sbjct: 895  NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLF 954

Query: 391  KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
              M + G   ++ + +AL+  L + G    A   L ++     +  A T S L+  F   
Sbjct: 955  LTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELISLFSRG 1014

Query: 451  GKGHKA 456
               H A
Sbjct: 1015 EYQHHA 1020



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 1/201 (0%)

Query: 188  ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
            + P+ +T+N ++  + + G    A +L+  M     + +IYTY  +++GLCK N +DEA 
Sbjct: 822  LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAF 881

Query: 248  LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
             +   +   G     +TFN++I  L K G    A  L   +   G +P+ VTY  +   L
Sbjct: 882  KMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENL 941

Query: 308  CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
              +G+L++   L   M  S    +      ++  L++ G        L  ++E+ F +  
Sbjct: 942  IEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEA 1001

Query: 368  YIYSTLISGLFKEGKAEDAMK 388
               S LIS LF  G+ +   K
Sbjct: 1002 STTSELIS-LFSRGEYQHHAK 1021


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 227/418 (54%), Gaps = 6/418 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  +NHI++ +  N +     FN ++ ++ +L     AI   ++M ++  +PD++T+  
Sbjct: 47  AVSSFNHILHMR--NPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNI 104

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C    L+ A  +L ++   G  P  VT   LI GLC NG++  A    D++  KG
Sbjct: 105 LINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKG 164

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              ++V+Y TLI+GLC  G    A+ +L ++      PN V Y TII+ L K    +  +
Sbjct: 165 FHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHAS 224

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M  ++   +   Y+TLI G    G+ ++A+ L+ QM+ K  KP+   ++ L+DGL
Sbjct: 225 DLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGL 284

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G+  +A  +L  MI  G  +N  TY+SLM G+F   + +KA  ++  MA+     + 
Sbjct: 285 CKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDV 344

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             YS++I+GLC+   + EA  ++ +M S+   P+ V Y+S+I GL   G + +A  L NE
Sbjct: 345 QSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNE 404

Query: 533 MLCLEPKSQP-DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           M     + QP DV TY+ LL+ALCK   +  +I L+  + D+G  P++ T  I +  L
Sbjct: 405 M---HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGL 459



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/519 (26%), Positives = 253/519 (48%), Gaps = 47/519 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------------YN 178
           V++A+  F+ ++   +  + +  FN +L+ +++   +H A+ F               +N
Sbjct: 44  VDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFN 103

Query: 179 HIVNA----KHMNIL-------------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR 221
            ++N      H+N               P+T+T   +IK +C  G V  A+    ++  +
Sbjct: 104 ILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAK 163

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF--PTPVTFNVLINGLCKNGELG 279
               D  +Y TL++GLCK      A+ +L   ++DG    P  V +N +I+ LCK+  + 
Sbjct: 164 GFHLDQVSYGTLINGLCKTGETRAALQVL--RKIDGLLVQPNVVMYNTIIDSLCKDKLVI 221

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A+ L   M +K   P+ VTY TLI+G  + G L +AV L ++M+     P+  T+  ++
Sbjct: 222 HASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILV 281

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +GL K G       VL  M ++    N   Y++L+ G F   +   A  ++  M  +G  
Sbjct: 282 DGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVT 341

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+   YS +I+GLC+    DEA  +  EM +   A N  TY+SL+ G  + G+   A ++
Sbjct: 342 PDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDL 401

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
             +M       + + YS L+  LC++ ++ +A  + T++  +G +P++  Y+ ++ GLC 
Sbjct: 402 VNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCK 461

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G +++A  ++ ++L        DV  YN+++N LCK+     ++ L++ M D GC PD 
Sbjct: 462 NGRLKDAQAVYQDLLI--KGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDA 519

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           VT    + AL E  +         N+ A++L +     G
Sbjct: 520 VTYETLVRALFENDK---------NDKAVKLLREMIVQG 549



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/318 (30%), Positives = 170/318 (53%), Gaps = 4/318 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA+ LF+ M+ + + K  V +FN +++ + +EG   +A    N +       +  N +
Sbjct: 255 LKEAVGLFNQMLLK-NIKPDVYTFNILVDGLCKEGEMKKA---RNVLAVMIKQGVDSNIV 310

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N ++     +   + A  +F  M  R   PD+ +Y  +++GLCK   +DEAV L  EM
Sbjct: 311 TYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEM 370

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  VT+N LI+GL K G +  A  LV+ M  +G   + +TY++L+  LC    +
Sbjct: 371 HSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQV 430

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           DKA++L+ ++      PN  TY  +++GL K GR  D   V   +  + +H++  +Y+ +
Sbjct: 431 DKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVM 490

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ++GL KEG  ++A+ L  +M + GC P+ V Y  L+  L    K D+A ++L EMI  G 
Sbjct: 491 VNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGS 550

Query: 434 AANAFTYSSLMKGFFESG 451
           A  +   S+ M   +++ 
Sbjct: 551 AVGSNISSNSMLCVYQAA 568



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 170/349 (48%), Gaps = 30/349 (8%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVT----YGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           N+D AVS  + ++    M N V     +  I++ LVKL            ME ++   + 
Sbjct: 43  NVDDAVSSFNHILH---MRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDL 99

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + ++ LI+     G    A  +  ++ + G  P+TV  + LI GLC  GK  EA     +
Sbjct: 100 FTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDD 159

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           +I  G   +  +Y +L+ G  ++G+   A+++ + +       N V Y+ +I  LC+D  
Sbjct: 160 VIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKL 219

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A  + ++M+ +   PDVV Y+++I+G    G ++EA+ LFN+ML    K  PDV+T+
Sbjct: 220 VIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIK--PDVYTF 277

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           NIL++ LCK+  +  + ++L  M+ +G D ++VT N  +           DG        
Sbjct: 278 NILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLM-----------DG-------- 318

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                +Q     F +   M ++ ++P   ++  ++  LC+ K +  A+N
Sbjct: 319 -YFLVKQENKATF-VFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVN 365


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 228/418 (54%), Gaps = 11/418 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++  +++ + + G    A++    +V+A+H   +P+  T  +V++++C    VD+A +L 
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARH---VPDNTTLTVVVQSLCLGDRVDDARELV 207

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCK 274
            EM  R    +  TY  L+DGLCK  RLDEAV LLL E+   G  P  VT++ +I+GLCK
Sbjct: 208 EEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCK 267

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G L  A  + + M    C P  +TYN+LI G C  G++D+A+ LL +MV   C P+ +T
Sbjct: 268 AGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVIT 324

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y T+++   K+GR  D   +   M   K   +   +++L+ GL  EG+ EDA++L +++ 
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 384

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            +GC P    Y+ ++DG C+  +  +AEE++ +  + G   N  TY+ L+ G   +G+  
Sbjct: 385 RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 444

Query: 455 KAVEIWKDMAKNN--CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
           +A++    +      C  +   Y++++  LC DG+  +A   + +M+ RG  P    +++
Sbjct: 445 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 504

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           ++  LC A   ++A +L  EM  ++    P   T + +++A C+   I  + +L + +
Sbjct: 505 VVFALCKAHQPQQAHELLEEM--IKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 234/476 (49%), Gaps = 26/476 (5%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++ K   + P TL  N+VI  +CR G + +A+ ++R+M   +  PD  TY  L+ GL K
Sbjct: 103 LLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSK 161

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             RL +AV +L EM      P   T  V++  LC    +  A +LV+ M  +G   N +T
Sbjct: 162 AGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAIT 221

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           Y+ L+ GLC    LD+AV+LL   V  +   P+ VTY T+I+GL K GR  D   +    
Sbjct: 222 YSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF--- 278

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           EE         Y++LI G  + G  ++A++L  +M++  C P+ + Y+ L+   C++G+ 
Sbjct: 279 EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRL 338

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A E+  +M+ N  + +  T++SL+ G    G+   A+E+ +++ +  C      Y+ +
Sbjct: 339 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 398

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           + G C+  ++R+A  +     SRG  P+ V Y+ ++ G C AG  ++AL+  +++     
Sbjct: 399 VDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG 458

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
                V  Y I+L+ALC+      ++     M+ RG  P   T    + AL  K   PQ 
Sbjct: 459 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALC-KAHQPQQ 517

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + L E                    M++   +P   T + VV   CR   IQ A
Sbjct: 518 AHELLEE--------------------MIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/484 (30%), Positives = 242/484 (50%), Gaps = 28/484 (5%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +  N ++  +C       A+ LF +M       +  TY  L+  LCK   LDEA+ L
Sbjct: 44  PDPVELNTILAELCDARDTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGL 102

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +M+  G  P  +  NV+I GLC+ G L  A  +   M      P+ +TY  L+HGL  
Sbjct: 103 LLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSK 161

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEY 368
            G L  AV +L  MV+++ +P+  T   ++  L  LG  VD AR L+  M  R    N  
Sbjct: 162 AGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLC-LGDRVDDARELVEEMLHRGMAANAI 220

Query: 369 IYSTLISGLFKEGKAEDAMK-LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
            YS L+ GL K  + ++A+  L  ++  +G  P+ V YS +IDGLC+ G+  +A +I  E
Sbjct: 221 TYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 280

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M    CA  A TY+SL+ G+  +G   +A+ +   M  +NC  + + Y+ L+   C+ G+
Sbjct: 281 M---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGR 337

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           L +A  ++ QM++    PDVV ++S++ GLC  G +E+AL+L  E+        P ++TY
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI--TRRGCPPTIYTY 395

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL- 606
           N +++  CK + +  + +L+     RG  P+ VT NI +          Q    +L++L 
Sbjct: 396 NCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ-ALQYLDQLN 454

Query: 607 -------------AI---RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                        AI    L +  RT    +  E M+Q+   P  +T+  VV  LC+  +
Sbjct: 455 SEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQ 514

Query: 651 IQAA 654
            Q A
Sbjct: 515 PQQA 518



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 221/451 (49%), Gaps = 31/451 (6%)

Query: 226 DIYTYCTLMDGLCKENRLDE-AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           D  T+  ++ GL    +L     LLLDE++  G  P PV  N ++  LC   +   A  L
Sbjct: 9   DSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTTTAMAL 68

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
            D M   G + N  TY  LIH LC    LD+A+ LL  M +    P  + +  +I GL +
Sbjct: 69  FDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCR 127

Query: 345 LGRAVDGARVLMSMEERKFHVNEYI-YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
            GR      V   M +   H  +++ Y+ L+ GL K G+  DA+++ ++M+     P+  
Sbjct: 128 AGRLRHALGVYRQMNDA--HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNT 185

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE-IWKD 462
             + ++  LC   + D+A E++ EM++ G AANA TYS+L+ G  +  +  +AV  +  +
Sbjct: 186 TLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGE 245

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           + +     + V YS +I GLC+ G+LR+A  ++ +M    C P  + Y+S+I G C AG 
Sbjct: 246 VTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGD 302

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           ++EA++L  +M  ++    PDV TY  L++A CK   +  + +L   M+     PD+VT 
Sbjct: 303 MDEAIRLLGKM--VDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 360

Query: 583 NIFLTAL--KEKLEAPQDGTDFLNELAIR-----LFKRQRTSGGF------KIVEVMLQK 629
              +  L  + ++E   D  + L E+  R     ++       G+      +  E ++  
Sbjct: 361 TSLVDGLCGEGRME---DALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVAD 417

Query: 630 FLS----PQTSTWERVVQELCRPKRIQAAIN 656
           F S    P T T+  +V   CR  R   A+ 
Sbjct: 418 FRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 448



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 155/346 (44%), Gaps = 44/346 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I     +G  +    +   M      +   S I     Y +A  ++EAIRL   M
Sbjct: 257 TYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLI---GGYCRAGDMDEAIRLLGKM 313

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           VD+ +C   V ++ ++++   + G    A E +  +V  K   + P+ +TF  ++  +C 
Sbjct: 314 VDD-NCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANK---LSPDVVTFTSLVDGLCG 369

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +++A++L  E+  R C P IYTY  ++DG CK N++ +A  L+ + +  G  P  VT
Sbjct: 370 EGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVT 429

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +N+L+ G C+ G   +A + +D +  +G  C  +   Y  ++  LC  G  D AV   + 
Sbjct: 430 YNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEE 489

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+    +P   T+ T++  L                                    K  +
Sbjct: 490 MIQRGYVPAAATFATVVFALC-----------------------------------KAHQ 514

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            + A +L ++M++ G  P      A++   CR G   +A+E+  E+
Sbjct: 515 PQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 115/264 (43%), Gaps = 26/264 (9%)

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN-GCAANAFTYSSLMKGFFESG 451
           M++ G   ++  ++ ++ GL    K      +L + I + G + +    ++++    ++ 
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
               A+ ++  MA+   V N   Y  LIH LC+   L EA  +   M SRG  P  + ++
Sbjct: 61  DTTTAMALFDKMAELGAV-NHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +I GLC AG +  AL ++ +M    P   PD  TY  L++ L K   +  ++ +L  M+
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMNDAHP---PDFLTYTKLVHGLSKAGRLRDAVQVLQEMV 176

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
                PD  T  + + +                     L    R     ++VE ML + +
Sbjct: 177 SARHVPDNTTLTVVVQS---------------------LCLGDRVDDARELVEEMLHRGM 215

Query: 632 SPQTSTWERVVQELCRPKRIQAAI 655
           +    T+  +V  LC+ +R+  A+
Sbjct: 216 AANAITYSALVDGLCKCERLDEAV 239



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 107/275 (38%), Gaps = 70/275 (25%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI  Y  +GD      +L +M  +       ++  +  A+ K   +++A  LF  M
Sbjct: 289 TYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQM 348

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------------YNHIVNA------ 183
           V        V +F S+++ +  EG    ALE                YN +V+       
Sbjct: 349 VAN-KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQ 407

Query: 184 -----------KHMNILPNTLTFNL----------------------------------- 197
                      +    +PNT+T+N+                                   
Sbjct: 408 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY 467

Query: 198 --VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
             ++  +CR G  D+A+Q + EM  R   P   T+ T++  LCK ++  +A  LL+EM  
Sbjct: 468 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 527

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            G  P P T + +++  C+ G + +A +L   + L
Sbjct: 528 YGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 562


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 235/444 (52%), Gaps = 9/444 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +EE I LF  M+        V  F+ VL+ I +   Y   +  ++H+   +   I  +  
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIV-DFSKVLSKIAKSKNYDLVISLFHHM---EVCGIGHDLY 105

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N+VI  +CR      A+ +  +M     EPD+ T  +L++G C+ NR+ +A+ L+ +M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G  P  V +N +I+G CK G +  A +L D M   G   + VTYN+L+ GLC  G  
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A  L+  MV    +PN +T+  +I+  VK G+  +  ++   M  R    + + Y++L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+GL   G+ ++A ++   M+ KGC P+ V Y+ LI+G C+  + DE  ++  EM   G 
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY+++++G+F++G+   A EI+  M       N   YS+L++GLC + ++ +A +
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALV 402

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  M     + D+  Y+ +IHG+C  G+VE+A  LF  + C   K  PDV +Y  +++ 
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK--PDVVSYTTMISG 460

Query: 554 LCKQSNISHSIDLLNSMMDRGCDP 577
            C++     S  L   M + G  P
Sbjct: 461 FCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 229/415 (55%), Gaps = 7/415 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP+ + F+ V+  + +    D  I LF  M V     D+Y+Y  +++ LC+ +R   A+ 
Sbjct: 66  LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           ++ +M   G  P  VT + LING C+   +  A  LV  M   G  P+ V YNT+I G C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G ++ AV L DRM       + VTY +++ GL   GR  D AR++  M  R    N  
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ +I    KEGK  +AMKL+++M  +   P+   Y++LI+GLC  G+ DEA+++L  M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +  GC  +  TY++L+ GF +S +  +  +++++MA+   V + + Y+ +I G  + G+ 
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A+ ++++M SR   P++  YS +++GLC    VE+AL LF  M   + + + D+ TYN
Sbjct: 366 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM--QKSEIELDITTYN 420

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
           I+++ +CK  N+  + DL  S+  +G  PD+V+    ++    K +   D +D L
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ--WDKSDLL 473



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/283 (22%), Positives = 128/283 (45%), Gaps = 23/283 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S ++S + K    +  + L+  M   G   +   Y+ +I+ LCR  +   A  ++ +M+
Sbjct: 72  FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  T SSL+ GF +  +   A+++   M +     + V Y+ +I G C+ G + 
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  ++ +M   G + D V Y+S++ GLC +G   +A +L  +M+  +    P+V T+  
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI--VPNVITFTA 249

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +++   K+   S ++ L   M  R  DPD+ T N  +  L                    
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL-------------------- 289

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                R     +++++M+ K   P   T+  ++   C+ KR+ 
Sbjct: 290 -CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 155/597 (25%), Positives = 282/597 (47%), Gaps = 65/597 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            +Y+L+   + +   +    VL  M R    +  ++F  +  +Y +A  +  A+R+  T+
Sbjct: 198 VYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVL-TL 256

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +   +  +   N+ + V+++     +AL F   +   +   I P+ +T+N +IK  C 
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERM---QVTGIKPDIVTYNSLIKGYCD 313

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPV 263
           L  +++A++L   +P + C PD  +Y T+M  LCKE ++++   L+++M Q     P  V
Sbjct: 314 LNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQV 373

Query: 264 TFNVLINGL-----------------------------------CKNGELGRAAKLVDNM 288
           T+N LI+ L                                   C+ G +  A  LV +M
Sbjct: 374 TYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDM 433

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
           + + C P+ VTY  ++ G C  G +D+A  +L +M    C PN V+Y  ++NGL   G++
Sbjct: 434 YSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKS 493

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
           ++   ++   EE  +  N   Y  ++ G  +EGK  +A  L ++M+EKG  P  V  + L
Sbjct: 494 LEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLL 553

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I  LC+  K  EA++ L E +N GCA N   +++++ GF + G    A+ + +DM  +N 
Sbjct: 554 IQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNK 613

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + V Y+ L   L + G+L EA  +  +MLS+G  P  V + S+IH  C  G V++ L 
Sbjct: 614 HPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLN 673

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L + M+    K +P    YN ++  LC   N+  +  LL  ++      D  TC++ + +
Sbjct: 674 LLDRMV----KRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMES 729

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
                                  K+      +K+   M ++ L+P     E+V ++L
Sbjct: 730 ---------------------CLKKGVALSAYKVACQMFRRNLTPDLKLCEKVTKKL 765



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 214/460 (46%), Gaps = 73/460 (15%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           L +  ++  + +  L   A ++ R M  R  E     +  +M    +  +L  A+ +L  
Sbjct: 197 LVYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTL 256

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG------ 306
           MQ  G  P     N  I  L K  +L +A + ++ M + G  P+ VTYN+LI G      
Sbjct: 257 MQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316

Query: 307 -----------------------------LCLKGNLDKAVSLLDRMVA-SKCMPNEVTYG 336
                                        LC +  +++   L+++MV  S  +P++VTY 
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+I+ L K G A D    L   E++ FH+++  YS ++    ++G+ ++A  L   M  +
Sbjct: 377 TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
            C P+ V Y+A++DG CR+G+ DEA+++L +M  +GC  N  +Y++L+ G   SGK  +A
Sbjct: 437 SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEA 496

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHG----------------------------------- 481
            E+     ++    N + Y V++HG                                   
Sbjct: 497 REMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQS 556

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC++ K+ EA+    + L++GC  +VV ++++IHG C  G +E AL +  +M        
Sbjct: 557 LCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYL--SNKH 614

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           PD  TY  L +AL K+  +  + +L+  M+ +G DP  VT
Sbjct: 615 PDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVT 654



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 191/443 (43%), Gaps = 52/443 (11%)

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
            Y TL+D L K      A  +L  M   G   +P  F  ++    + G+L  A +++  M
Sbjct: 198 VYYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLM 257

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              G  PN    NT I+ L     L+KA+  L+RM  +   P+ VTY ++I G   L R 
Sbjct: 258 QKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRI 317

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                                              EDA++L   +  KGC P+ V Y  +
Sbjct: 318 -----------------------------------EDALELIAGLPSKGCPPDKVSYYTV 342

Query: 409 IDGLCRVGKPDEAEEILFEMI-NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +  LC+  K ++ + ++ +M+ ++    +  TY++L+    + G    A+   K+     
Sbjct: 343 MGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKG 402

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              ++V YS ++H  C+ G++ EA+ +   M SR C PDVV Y++++ G C  G ++EA 
Sbjct: 403 FHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAK 462

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           K+  +M   +   +P+  +Y  LLN LC       + +++N   +    P+ +T  + + 
Sbjct: 463 KMLQQM--YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMH 520

Query: 588 ALKE--KLEAPQDGTDFL------------NELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
             +   KL    D T  +            N L   L + Q+     K +E  L K  + 
Sbjct: 521 GFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAI 580

Query: 634 QTSTWERVVQELCRPKRIQAAIN 656
               +  V+   C+   ++AA++
Sbjct: 581 NVVNFTTVIHGFCQIGDMEAALS 603



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 2/207 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N + F  VI   C++G ++ A+ +  +M + N  PD  TY  L D L K+ RLDEA  L+
Sbjct: 581 NVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELI 640

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M   G  PTPVTF  +I+  C+ G +     L+D M  +   P    YN +I  LC  
Sbjct: 641 VKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRK--PFRTIYNHVIEKLCDF 698

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           GNL++A  LL +++ +    +  T   ++   +K G A+   +V   M  R    +  + 
Sbjct: 699 GNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYKVACQMFRRNLTPDLKLC 758

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKG 397
             +   L  +G   +A KL  + +E+G
Sbjct: 759 EKVTKKLVLDGNLVEADKLMLRFVERG 785


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 143/489 (29%), Positives = 249/489 (50%), Gaps = 41/489 (8%)

Query: 170 YHRALEFYNHIV--NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           +H+ L F++H    NAK ++      +FN +          D+A+ LF  +      P +
Sbjct: 41  FHKFLRFFSHCPKQNAKILS------SFNGI----------DDAVTLFNHLINMQPLPSV 84

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
             + T++  + K      A+ LL +M   G  P+  T ++ IN  C  GE+G A  ++  
Sbjct: 85  IQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGI 144

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           +  +G  PN +T  T++ GLC+ G + KA+   D + A   + +EV YGT+INGL K+GR
Sbjct: 145 VLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGR 204

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           ++D  ++L  ME +    N  IY+ +I    K+     A  L+ ++++ G  P+ + Y++
Sbjct: 205 SIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTS 264

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI G CR G+  E ++++ EM+N     N +T++ L+  F   GK  +A  ++  M K  
Sbjct: 265 LIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRG 324

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              + V ++ LI G C  G + EAR ++  +  RG  PDV +Y+ +I G C    ++EA+
Sbjct: 325 QQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAV 384

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            LFNEM C       D+  Y+ L++ LCK   IS++ +L +++ + G  P+++T NI + 
Sbjct: 385 SLFNEMRC--KNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILID 442

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           A                       K Q    G ++ ++M  K L+P   T+  ++   C+
Sbjct: 443 A---------------------FCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCK 481

Query: 648 PKRIQAAIN 656
            KRI+ A+N
Sbjct: 482 SKRIREAMN 490



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 215/409 (52%), Gaps = 11/409 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +  +V+  +   G   +A++F++   N     +L + + +  +I  +C++G   +A QL 
Sbjct: 156 TLTTVMKGLCINGEVQKAMDFHD---NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLL 212

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKEN---RLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +EM  +  +P+I  Y  ++D  CK+    +  +  L + +M +D   P  +T+  LI G 
Sbjct: 213 QEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGID---PDILTYTSLIRGF 269

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C+ G+ G   +L+  M  K   PN  T+N LI   C KG + +A  + + MV     P+ 
Sbjct: 270 CRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDI 329

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VT+ T+I+G    G  ++  ++  ++ ER    + + Y+ LI G  K  + ++A+ L+ +
Sbjct: 330 VTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNE 389

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M  K    + V+YS+LIDGLC+ G+   A E+   + N+G   N  TY+ L+  F +   
Sbjct: 390 MRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQD 449

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
               +E++K M         + Y++LI+G C+  ++REA  + + M S+   PD + Y+S
Sbjct: 450 IDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNS 509

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           +  GLC +G + +A +LF  M    P    DV TYN+LL+A CK  +++
Sbjct: 510 LFDGLCKSGRISDAWELFKVMHVGGPPV--DVATYNVLLDAFCKAQDVA 556



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 231/489 (47%), Gaps = 55/489 (11%)

Query: 141 FHTMVDEF-HC----KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           FH  +  F HC     + + SFN +            A+  +NH++N   M  LP+ + F
Sbjct: 41  FHKFLRFFSHCPKQNAKILSSFNGI----------DDAVTLFNHLIN---MQPLPSVIQF 87

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N +I +V ++     AI L ++M  +   P I+T    ++  C    +  A  +L  +  
Sbjct: 88  NTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLK 147

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P  +T   ++ GLC NGE+ +A    DN+  +G L +EV Y TLI+GLC  G    
Sbjct: 148 RGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSID 207

Query: 316 AVSLLDRMVASKCMPNEV-----------------------------------TYGTIIN 340
           A  LL  M      PN V                                   TY ++I 
Sbjct: 208 AFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIR 267

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G  + G+  +  +++  M  +  + N Y ++ LI    ++GK  +A  ++  M+++G +P
Sbjct: 268 GFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQP 327

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + V ++ LI G C  G   EA ++   +   G   + ++Y+ L+ G+ +  +  +AV ++
Sbjct: 328 DIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLF 387

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
            +M   N V + V YS LI GLC+ G++  A  +++ + + G  P+V+ Y+ +I   C  
Sbjct: 388 NEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKI 447

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
             ++  ++LF +++C +  + P V TYNIL+N  CK   I  +++LL+ M  +   PD +
Sbjct: 448 QDIDMGIELF-KLMCGKGLT-PTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSI 505

Query: 581 TCNIFLTAL 589
           T N     L
Sbjct: 506 TYNSLFDGL 514



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKS---FNSVLNVIIQEGLYHRALEF 176
           S+  +   Y K   ++EA+ LF    +E  CK  V     ++S+++ + + G    A E 
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLF----NEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWEL 421

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           ++ I N       PN +T+N++I   C++  +D  I+LF+ M  +   P + TY  L++G
Sbjct: 422 FSTINNDGPP---PNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILING 478

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            CK  R+ EA+ LL  MQ     P  +T+N L +GLCK+G +  A +L   M + G   +
Sbjct: 479 YCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVD 538

Query: 297 EVTYNTLIHGLC 308
             TYN L+   C
Sbjct: 539 VATYNVLLDAFC 550


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 215/401 (53%), Gaps = 2/401 (0%)

Query: 189  LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            +P+ + F  V+  + ++   D  I LF +M       D+Y++  L+   C+ +R   A+ 
Sbjct: 612  IPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALA 671

Query: 249  LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
            LL +M   G  P+ VT   L+NG C+      A  LVD+M   G  PN V YNT+I+GLC
Sbjct: 672  LLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLC 731

Query: 309  LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
               +L+ A+ +   M     + + VTY T+I+GL   GR  D AR+L  M +RK   N  
Sbjct: 732  KNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVI 791

Query: 369  IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
             ++ LI    KEG   +A  L+K+M+ +   PN + Y++LI+G C  G+  +A+ +   M
Sbjct: 792  FFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLM 851

Query: 429  INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            ++ GC  +  TY++L+ GF +S +    ++++ +M     V +   Y+ LIHG C+ GKL
Sbjct: 852  VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKL 911

Query: 489  REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
              A+ V+ +M+  G  PD+V Y+ ++  LCN G +E+AL +  ++   + +   D+ TYN
Sbjct: 912  NVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDL--QKNQMDVDIITYN 969

Query: 549  ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            I++  +C+   +  +  L  S+  +G   D +     ++ L
Sbjct: 970  IIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGL 1010



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 236/450 (52%), Gaps = 15/450 (3%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           +  AL+ +  +V ++    LP+ + F  ++  +  L   +  I   ++M +     D+Y+
Sbjct: 46  FEDALDLFLEMVQSQP---LPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYS 102

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           +  L+   C+ +RL  A+ +L +M   G  P+ VTF  L++G C    +  A  LV +M 
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV 162

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM-VASKCMPNEVTYGTIINGLVKLGRA 348
             G  PN V YNTLI  LC  G+++ A+ LL+ M    +   + VTY T++ GL   G  
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
              AR+L  M +R+ + + + ++ LI    K+G  ++A +L+KQM++    PNTV Y++L
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I+GLC  G+   A++    M + GC  N  TY++L+ GF +S +    +++++ M +   
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           V +   Y+ LIHG C+ GKLR A+ +++ M+S G  PD++ +  ++HGLC  G +  A+ 
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            FN+M   E      +  YNI+++ LCK   +  + +L   +   G  PD  T  I +  
Sbjct: 403 KFNDMRSGE--KYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILG 460

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           L +    P+   D        LF+R +  G
Sbjct: 461 LCK--NGPRREAD-------ELFRRMKEDG 481



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 214/425 (50%), Gaps = 5/425 (1%)

Query: 153  TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
            ++  F  VL  I +   +   +  ++ + N   + I  +  +F ++I   CR      A+
Sbjct: 614  SIVDFTRVLTAIAKMNKFDIVIYLFHKMEN---LGISHDLYSFTILIHCFCRCSRFSLAL 670

Query: 213  QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
             L  +M     +P I T  +L++G C+ NR  EAV L+D M   G  P  V +N +INGL
Sbjct: 671  ALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGL 730

Query: 273  CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            CKN +L  A ++   M  KG + + VTYNTLI GLC  G    A  LL  MV  K  PN 
Sbjct: 731  CKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNV 790

Query: 333  VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            + +  +I+  VK G  ++   +   M  R  H N   Y++LI+G   +G+  DA  ++  
Sbjct: 791  IFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDL 850

Query: 393  MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
            M+ KGC P+ V Y+ LI G C+  + ++  ++  EM + G   +AFTY++L+ G+ ++GK
Sbjct: 851  MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGK 910

Query: 453  GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             + A +++  M       + V Y++L+  LC +GK+ +A ++   +       D++ Y+ 
Sbjct: 911  LNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNI 970

Query: 513  MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
            +I G+C    V+EA  LF  +       + D   Y  +++ LC+      +  L   M +
Sbjct: 971  IIQGMCRNDKVKEAWCLFRSL--TRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKE 1028

Query: 573  RGCDP 577
             G  P
Sbjct: 1029 DGFMP 1033



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 219/443 (49%), Gaps = 11/443 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A+ LF  MV       +V  F  +L  I     Y   + F   +   +   I  +  +
Sbjct: 47  EDALDLFLEMVQS-QPLPSVVDFTRLLTAIANLRRYETVIYFSQQM---ELFGISHDLYS 102

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           F ++I   CR   +  A+ +  +M     +P I T+ +L+ G C  NR+ +A  L+  M 
Sbjct: 103 FTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMV 162

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE-VTYNTLIHGLCLKGNL 313
             G  P  V +N LI+ LCKNG++  A +L++ M  KG L  + VTYNTL+ GLC  G  
Sbjct: 163 KSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEW 222

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  +L  M   +  P+  T+  +I+  VK G   +   +   M +     N   Y++L
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+GL   G+   A K +  M  KGC PN V Y+ LI+G C+  + ++  ++   M   G 
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             + FTY++L+ G+ + GK   A +I+  M       + + + +L+HGLC +G++  A +
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMV 402

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILL 551
            +  M S      +VAY+ MIHGLC A  VEEA +LF    C  P    +PD  TY I++
Sbjct: 403 KFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELF----CRLPVEGVKPDARTYTIMI 458

Query: 552 NALCKQSNISHSIDLLNSMMDRG 574
             LCK      + +L   M + G
Sbjct: 459 LGLCKNGPRREADELFRRMKEDG 481



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 191/382 (50%), Gaps = 4/382 (1%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D+A  LF EM      P I  +  ++  + K N+ D  + L  +M+  G      +F +L
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+  C+      A  L+  M   G  P+ VT  +L++G C      +AVSL+D M     
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            PN V Y T+INGL K     +   +   ME++    +   Y+TLISGL   G+  DA +
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L + M+++   PN + ++ALID   + G   EA+ +  EMI      N  TY+SL+ GF 
Sbjct: 777 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             G+   A  ++  M    C  + V Y+ LI G C+  ++ +   ++ +M  +G   D  
Sbjct: 837 IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAF 896

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEML-CLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
            Y+++IHG C AG +  A K+FN M+ C  P   PD+ TYNILL+ LC    I  ++ ++
Sbjct: 897 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVP---PDIVTYNILLDCLCNNGKIEKALVMV 953

Query: 568 NSMMDRGCDPDLVTCNIFLTAL 589
             +     D D++T NI +  +
Sbjct: 954 EDLQKNQMDVDIITYNIIIQGM 975



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 197/414 (47%), Gaps = 39/414 (9%)

Query: 120  SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
            SF  +   + +      A+ L   M+ +   + ++ +  S+LN   Q   +  A+   + 
Sbjct: 652  SFTILIHCFCRCSRFSLALALLGKMM-KLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDS 710

Query: 180  IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
            +     + + PN + +N VI  +C+   ++NA+++F  M  +    D  TY TL+ GLC 
Sbjct: 711  MA---ELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCN 767

Query: 240  ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              R  +A  LL +M      P  + F  LI+   K G L  A  L   M  +   PN +T
Sbjct: 768  SGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILT 827

Query: 300  YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
            YN+LI+G C++G L  A  + D MV+  C P+ VTY T+I G  K  R  DG ++   M 
Sbjct: 828  YNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 887

Query: 360  ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
             +    + + Y+TLI G  + GK   A K++ +M++ G  P+ V Y+ L+D LC      
Sbjct: 888  HQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLC------ 941

Query: 420  EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
                      NNG                   K  KA+ + +D+ KN    + + Y+++I
Sbjct: 942  ----------NNG-------------------KIEKALVMVEDLQKNQMDVDIITYNIII 972

Query: 480  HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             G+C + K++EA  ++  +  +G K D +AY +MI GLC  G   EA KL   M
Sbjct: 973  QGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRM 1026



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 181/348 (52%), Gaps = 2/348 (0%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           + D+A  L  EM      P+ V F  ++  + K  +      L   M   G   +  ++ 
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LIH  C       A++LL +M+     P+ VT G+++NG  +  R  +   ++ SM E 
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               N  IY+T+I+GL K     +A++++  M +KG   + V Y+ LI GLC  G+  +A
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +L +M+      N   +++L+  F + G   +A  ++K+M + +   N + Y+ LI+G
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C  G+L +A+ ++  M+S+GC PDVV Y+++I G C +  VE+ +KLF EM        
Sbjct: 835 FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM--THQGLV 892

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            D FTYN L++  C+   ++ +  + N M+D G  PD+VT NI L  L
Sbjct: 893 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 180/358 (50%), Gaps = 3/358 (0%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L  G     R ++A+ L  EM      P+ V F  L+  +               M L G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              +  ++  LIH  C    L  A+S+L +M+     P+ VT+G++++G     R  D  
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDG 411
            ++ SM +  +  N  +Y+TLI  L K G    A++L  +M +KG    + V Y+ L+ G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC  G+  +A  IL +M       + FT+++L+  F + G   +A E++K M +++   N
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V Y+ LI+GLC  G+L  A+  +  M S+GC P+VV Y+++I+G C +  VE+ +KLF 
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQ 335

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            M         D FTYN L++  C+   +  + D+ + M+  G  PD++T  I L  L
Sbjct: 336 RM--YREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGL 391



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 143/595 (24%), Positives = 245/595 (41%), Gaps = 78/595 (13%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + +A  L  +MV   + +  V  +N++++ + + G  + ALE  N +   K   +  + +
Sbjct: 151 IHDAFSLVASMVKSGY-EPNVVVYNTLIDCLCKNGDVNIALELLNEM--EKKGRLAADLV 207

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N ++  +C  G    A ++ R+M  R   PD++T+  L+D   K+  LDEA  L  +M
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM 267

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  VT+N LINGLC +G L  A K  D M  KGC PN VTYNTLI+G C    +
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRV 327

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           +  + L  RM     + +  TY T+I+G  ++G+      +   M       +   +  L
Sbjct: 328 EDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL   G+   AM  +  M         V Y+ +I GLC+  K +EA E+   +   G 
Sbjct: 388 LHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGV 447

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV-------------YNEVCYSVLI- 479
             +A TY+ ++ G  ++G   +A E+++ M ++  +              N+V    +I 
Sbjct: 448 KPDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIII 507

Query: 480 -----HGLCEDGKL---REARMVWTQ----------------------MLSRGCKPDVVA 509
                  + E G L        +W+                       +L RG  P+  +
Sbjct: 508 CPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRS 567

Query: 510 YSSM---------------IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           +S                 +    +    ++A  LF EM  L+ +  P +  +  +L A+
Sbjct: 568 FSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEM--LQSRPIPSIVDFTRVLTAI 625

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVT----------CNIFLTAL----KEKLEAPQDGT 600
            K +     I L + M + G   DL +          C+ F  AL    K      Q   
Sbjct: 626 AKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSI 685

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             L  L     +  R      +V+ M +  L P    +  V+  LC+ + +  A+
Sbjct: 686 VTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNAL 740



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/379 (28%), Positives = 185/379 (48%), Gaps = 11/379 (2%)

Query: 75   KLGSYQLGDSTFYSLIQHYANSGDFK---SLEMVLYRMRREKRVVLEKSFIFIFKAYGKA 131
            KLG +Q    T  SL+  +     F+   SL   +  +  E  VV+  + I       K 
Sbjct: 678  KLG-FQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVI---NGLCKN 733

Query: 132  HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
              +  A+ +F+ M  +      V ++N++++ +   G +  A      +V  K   I PN
Sbjct: 734  RDLNNALEIFYGMEKKGIVADAV-TYNTLISGLCNSGRWTDAARLLRDMVKRK---IDPN 789

Query: 192  TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             + F  +I T  + G +  A  L++EM  R+  P+I TY +L++G C + RL +A  + D
Sbjct: 790  VIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFD 849

Query: 252  EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
             M   GCFP  VT+N LI G CK+  +    KL   M  +G + +  TYNTLIHG C  G
Sbjct: 850  LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAG 909

Query: 312  NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
             L+ A  + +RMV     P+ VTY  +++ L   G+      ++  +++ +  V+   Y+
Sbjct: 910  KLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYN 969

Query: 372  TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
             +I G+ +  K ++A  L++ +  KG K + + Y  +I GLCR G   EA+++   M  +
Sbjct: 970  IIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKED 1029

Query: 432  GCAANAFTYSSLMKGFFES 450
            G   +   Y   ++  + S
Sbjct: 1030 GFMPSERIYDETLRDHYTS 1048



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 157/325 (48%), Gaps = 21/325 (6%)

Query: 68   EIFNSTPKLGSYQLGDS-TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--- 123
            EIF    K G   + D+ T+ +LI    NSG +     +L  M + K   ++ + IF   
Sbjct: 741  EIFYGMEKKGI--VADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK---IDPNVIFFTA 795

Query: 124  IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK----SFNSVLNVIIQEGLYHRALEFYNH 179
            +   + K   + EA  L+  M+     +R+V     ++NS++N    +G    A   ++ 
Sbjct: 796  LIDTFVKEGNLLEAKNLYKEMI-----RRSVHPNILTYNSLINGFCIQGRLGDAKHMFDL 850

Query: 180  IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
            +V+       P+ +T+N +I   C+   V++ ++LF EM  +    D +TY TL+ G C+
Sbjct: 851  MVSK---GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQ 907

Query: 240  ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              +L+ A  + + M   G  P  VT+N+L++ LC NG++ +A  +V+++       + +T
Sbjct: 908  AGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIIT 967

Query: 300  YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
            YN +I G+C    + +A  L   +       + + Y T+I+GL + G   +  ++   M+
Sbjct: 968  YNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMK 1027

Query: 360  ERKFHVNEYIYSTLISGLFKEGKAE 384
            E  F  +E IY   +   +    AE
Sbjct: 1028 EDGFMPSERIYDETLRDHYTSLSAE 1052



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 133/286 (46%), Gaps = 23/286 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ +++ + K  K +  + L+ +M   G   +   ++ LI   CR  +   A  +L +M+
Sbjct: 618 FTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMM 677

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  T  SL+ GF +  +  +AV +   MA+     N V Y+ +I+GLC++  L 
Sbjct: 678 KLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLN 737

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  ++  M  +G   D V Y+++I GLCN+G   +A +L  +M+  + K  P+V  +  
Sbjct: 738 NALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMV--KRKIDPNVIFFTA 795

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L++   K+ N+  + +L   M+ R   P+++T N                   +N   I+
Sbjct: 796 LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN-----------------SLINGFCIQ 838

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                R      + ++M+ K   P   T+  ++   C+ KR++  +
Sbjct: 839 ----GRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 880



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 128/284 (45%), Gaps = 26/284 (9%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L +G     + EDA+ L+ +M++    P+ V ++ L+  +  + + +       +M   G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
            + + ++++ L+  F    +   A+ I   M K     + V +  L+HG C   ++ +A 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNIL 550
            +   M+  G +P+VV Y+++I  LC  G V  AL+L NEM   E K +   D+ TYN L
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEM---EKKGRLAADLVTYNTL 212

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           L  LC       +  +L  M  R  +PD+ T     TAL +     Q   D   E    L
Sbjct: 213 LTGLCYSGEWRQAARILRDMTKRRINPDVFT----FTALIDAF-VKQGNLDEAQE----L 263

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +K+            MLQ  + P T T+  ++  LC   R+  A
Sbjct: 264 YKQ------------MLQSSIGPNTVTYNSLINGLCMHGRLYHA 295


>gi|359483659|ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 172/607 (28%), Positives = 281/607 (46%), Gaps = 102/607 (16%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS-FIFIFK 126
           + F     L ++    ST+ +LI    +   F++++ VL  M        ++S F+ I +
Sbjct: 112 QTFRWASNLPNFIHNQSTYRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVR 171

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             G+A +V + I++   ++ +F    ++K FNS+L+V+++E +   A EFY         
Sbjct: 172 GLGRARMVRQMIKVLD-LITKFGENPSLKIFNSILDVLVKEDI-DLAREFYR-------- 221

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
                                        ++M +     D YT+  LM GLC  NR+ +A
Sbjct: 222 -----------------------------KKMMMNGVSGDDYTFGILMKGLCLTNRIGDA 252

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             LL  M+  G  P  V +N +I+ LCKNG++GRA  L++ M      P++VT+N LI  
Sbjct: 253 FKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEM----VEPSDVTFNVLISA 308

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C + NL +A+ LL++  +   +P+ VT   ++  L K GR  +G  VL  +E     V+
Sbjct: 309 YCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVD 368

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+TLI G    GKA+   ++ K M  KGC PN   Y+ L  G C  G  D A ++  
Sbjct: 369 VVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGMLDSAIDLFN 428

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN-------CVYNEVCY---- 475
           +M  +G   N  TY +L++G    G+     +I + M ++          YN + Y    
Sbjct: 429 DMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPYNSIIYGLYK 488

Query: 476 ------------------------SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
                                   S+ I G C +G + +A+ V+ QM+  G  P V+ Y 
Sbjct: 489 KNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEGGVPSVLVYV 548

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +IHG C  G+V EA +L NEM  ++    P   T+N L++A C Q  +  ++ L+  M+
Sbjct: 549 CLIHGFCQDGNVREAFELINEM--VDHGYFPTAPTFNALISAFCGQGKVGSALKLMEDMV 606

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
            RGC PD+ + +  + AL  K        DF  + A+RLF +            M++K +
Sbjct: 607 GRGCLPDMGSYSPMVDALCNK-------GDF--QKAVRLFLQ------------MVEKDI 645

Query: 632 SPQTSTW 638
            P  STW
Sbjct: 646 LPDYSTW 652


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 255/524 (48%), Gaps = 7/524 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSL-EMVLYRMRREKRVVLEKSFIFIFK 126
           + F    K  +Y+   ST+ +LI        +  + +M+   +R    VV       + +
Sbjct: 75  QFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVR 134

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             G A +V +AI +F+  +    C+   +++NS++ +++ EG Y +  + YN +    H 
Sbjct: 135 MLGNAKMVRQAITIFYQ-IKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGH- 192

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
              P+T+T++ +I   C+LG  D+AIQL  EM     +P    Y  L+    K N    A
Sbjct: 193 -CFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 251

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L +EM+   C P   T+  LI GL K G +  A      M  +GC P+ V  N +I+ 
Sbjct: 252 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 311

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHV 365
           L   G LD A+ L   M   +C+P+ VTY TII  L +   RA +       M+E     
Sbjct: 312 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS LI G  K  + E AM L ++M EKG  P    Y +LID L +  + D A E+ 
Sbjct: 372 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 431

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+  N  +++A  Y+ ++K   ++G+   A+ ++ +M K  C  +   Y+ L+ GL   
Sbjct: 432 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 491

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L EA     +M   GC PD+ +Y+ +++GL   G    A+++ + M   +   +PDV 
Sbjct: 492 GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK--QSTVRPDVV 549

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +YN +L AL        +  L+  M   G + DL+T +  L A+
Sbjct: 550 SYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI 593



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 135/531 (25%), Positives = 233/531 (43%), Gaps = 57/531 (10%)

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           VL++ FI I K +      E+A+ +    VD +  +  +K+ +  +NV +Q         
Sbjct: 26  VLDERFIRILKIFKWGPDAEKALEVLMLRVDHWLVREVMKT-DVGVNVKMQ--------- 75

Query: 176 FYNHIVNAKHMNILPNTLTFNLVI---KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           F+     AK  N   +T T+  +I   + V + G +   IQ     P+    P   +   
Sbjct: 76  FFRWA--AKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVV 133

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
            M G  K  R  +A+ +  +++   C P    +N +I  L   G+  +  +L + M  +G
Sbjct: 134 RMLGNAKMVR--QAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 191

Query: 293 -CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
            C P+ VTY+ LI   C  G  D A+ LL+ M      P    Y  +I    K   A   
Sbjct: 192 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 251

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +   M  +    + + Y+ LI GL K G+ ++A   + +M  +GC+P+TV  + +I+ 
Sbjct: 252 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 311

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY- 470
           L + G+ D+A ++  EM    C  +  TY++++K  FES      V  W +  K + +  
Sbjct: 312 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 371

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS------------------ 512
           +   YS+LI G C+  ++ +A M+  +M  +G  P   AY S                  
Sbjct: 372 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 431

Query: 513 -----------------MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
                            MI  L  AG +++A+ +F+EM  L     PDV+ YN L++ L 
Sbjct: 432 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL--GCAPDVYAYNALMSGLA 489

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           +   +  ++  +  M + GC PD+ + NI L  L  K   P    + L+ +
Sbjct: 490 RTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLA-KTGGPHRAMEMLSNM 539



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/287 (29%), Positives = 147/287 (51%), Gaps = 3/287 (1%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           GKA  +++A++LF  M +   C  +V ++N+++  + +     RA E  +     K   I
Sbjct: 313 GKAGRLDDAMKLFQEM-ETLRCIPSVVTYNTIIKALFESK--SRASEVPSWFERMKESGI 369

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P++ T++++I   C+   ++ A+ L  EM  +   P    YC+L+D L K  R D A  
Sbjct: 370 SPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACE 429

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L  E++ +    +   + V+I  L K G L  A  + D M   GC P+   YN L+ GL 
Sbjct: 430 LFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLA 489

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G LD+A+S + RM    C+P+  +Y  I+NGL K G       +L +M++     +  
Sbjct: 490 RTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVV 549

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
            Y+T++  L   G  E+A KL K+M   G + + + YS++++ + +V
Sbjct: 550 SYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKV 596



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 150/363 (41%), Gaps = 67/363 (18%)

Query: 299 TYNTLIHGLCLK-----GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           TY  LIH  CL+     G + K +  + R       P E++    + G  K+ R      
Sbjct: 92  TYMALIH--CLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVR--QAIT 147

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGL 412
           +   ++ RK       Y+++I  L  EG+ E   +L+ +M  +G C P+TV YSALI   
Sbjct: 148 IFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAF 207

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C++G+ D A ++L EM   G       Y+ L+  FF+    H A+ ++++M    C    
Sbjct: 208 CKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYC---- 263

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
                                          +PDV  Y+ +I GL  AG ++EA   F E
Sbjct: 264 -------------------------------RPDVFTYTELIRGLGKAGRIDEAYHFFCE 292

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M       +PD    N ++N L K   +  ++ L   M    C P +VT N  + AL E 
Sbjct: 293 MQ--REGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFES 350

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                +   +        F+R + SG            +SP + T+  ++   C+  R++
Sbjct: 351 KSRASEVPSW--------FERMKESG------------ISPSSFTYSILIDGFCKTNRME 390

Query: 653 AAI 655
            A+
Sbjct: 391 KAM 393


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 251/515 (48%), Gaps = 15/515 (2%)

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +++D     R   S+N+VL  + + G + RA      +    H    PN +++ ++++ +
Sbjct: 66  SLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRAL 125

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C   L D A+ L R M       D+ TY TL+ GLC    +D+AV L+ EM   G  P  
Sbjct: 126 CADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNV 185

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V ++ L+ G CK+G      K+   M  KG  P+ V Y  LI  LC  G   KA  ++D 
Sbjct: 186 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MV     PN VTY  +IN + K G   +   VL  M E+    +   Y+TLI GL    +
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305

Query: 383 AEDAMKLWKQMMEKG--CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            ++AM L ++M+      KPN V ++++I GLC +G+  +A ++   M   GC  N  TY
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTY 365

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+ G     K  KA+E+  +M       +   YS+LI G C+  ++  A  + + M  
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           RG +P++  Y  ++  +C  G +E A  LFNEM   +     DV  Y+ +++  CK  ++
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEM---DNNFPLDVVAYSTMIHGACKAGDL 482

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQD------GTDFLNELAI--RL 610
             + +LL S++D G  PD VT +I +   A    +EA          + FL ++A+   L
Sbjct: 483 KTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSL 542

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            +   T G    V  ++++ ++   +   +++  L
Sbjct: 543 IQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 188/380 (49%), Gaps = 27/380 (7%)

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS---KCMPNEVT 334
           LG A  L+D +     + + V+YNT++  LC +G+ D+A +LL  M       C PN V+
Sbjct: 61  LGEATSLLDAL---PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y  ++  L     A     +L SM       +   Y TLI GL    + + A++L  +M 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           E G +PN VVYS+L+ G C+ G+ ++  ++  EM   G   +   Y+ L+    + GK  
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           KA  +   M +     N V Y+VLI+ +C++G ++EA  V  +M  +G  PDVV Y+++I
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GL +   ++EA+ L  EM+  +   +P+V T+N ++  LC    +  +  +   M + G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
           C  +LVT N+ +  L                  +R+ K ++     ++++ M    L P 
Sbjct: 358 CMVNLVTYNLLIGGL------------------LRVHKVRK---AMELMDEMTSLGLEPD 396

Query: 635 TSTWERVVQELCRPKRIQAA 654
           + T+  +++  C+  ++  A
Sbjct: 397 SFTYSILIKGFCKMWQVDRA 416



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 161/332 (48%), Gaps = 5/332 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EAI +   M  E      V ++N+++  +        A+     +V  K++ + PN +
Sbjct: 271 VKEAIGVLKKM-SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNI-VKPNVV 328

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN VI+ +C +G +  A Q+   M    C  ++ TY  L+ GL + +++ +A+ L+DEM
Sbjct: 329 TFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM 388

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P   T+++LI G CK  ++ RA  L+  M  +G  P    Y  L+  +C +G +
Sbjct: 389 TSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMM 448

Query: 314 DKAVSLLDRMVASKCMP-NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           ++A +L + M      P + V Y T+I+G  K G       +L S+ +     +   YS 
Sbjct: 449 ERARNLFNEM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSI 506

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +I+   K G  E A  + KQM   G  P+  V+ +LI G    G+ ++  E++ EMI   
Sbjct: 507 VINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKN 566

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
            A ++   S+L      S +G   ++   D +
Sbjct: 567 IALDSKIISTLSTSLVASNEGKALLQSLPDFS 598



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 7/326 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI      G  K    VL +M  +       ++  + K       ++EA+ L   M
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 145 VDEFH-CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           V   +  K  V +FNSV+  +   G   +A +    +   +    + N +T+NL+I  + 
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM---EETGCMVNLVTYNLLIGGLL 373

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R+  V  A++L  EM     EPD +TY  L+ G CK  ++D A  LL  M+  G  P   
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLP-NEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            +  L+  +C+ G + RA  L + M      P + V Y+T+IHG C  G+L  A  LL  
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKS 491

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           +V     P+ VTY  +IN   K G       VL  M    F  +  ++ +LI G   +G+
Sbjct: 492 IVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGE 551

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSAL 408
               ++L ++M+ K    ++ + S L
Sbjct: 552 INKVLELIREMITKNIALDSKIISTL 577



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 107/223 (47%), Gaps = 26/223 (11%)

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMA---KNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           +A +Y++++      G   +A  + + M+      C  N V Y+VL+  LC D    +A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +   M S G + DVV Y ++I GLC+A  V++A++L  EM C E   +P+V  Y+ LL 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEM-C-ESGIEPNVVVYSSLLQ 193

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             CK         +   M ++G +PD+V      T L + L               ++ K
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVV----MYTGLIDSL--------------CKVGK 235

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            ++  G   ++++M+++ L P   T+  ++  +C+   ++ AI
Sbjct: 236 AKKAHG---VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 127/295 (43%), Gaps = 40/295 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ +LI+  ++  +      +L  M R K +V      F  + +       + +A ++  
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-R 350

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M++E  C   + ++N ++  +++     +A+E  + + +   + + P++ T++++IK  
Sbjct: 351 AMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS---LGLEPDSFTYSILIKGF 407

Query: 203 CRLGLVDNAIQLFREMPVRNCEP----------------------------------DIY 228
           C++  VD A  L   M  R  EP                                  D+ 
Sbjct: 408 CKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVV 467

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
            Y T++ G CK   L  A  LL  +  +G  P  VT++++IN   K+G++  A  ++  M
Sbjct: 468 AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
              G LP+   +++LI G   KG ++K + L+  M+      +     T+   LV
Sbjct: 528 TASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLV 582


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 144/498 (28%), Positives = 247/498 (49%), Gaps = 29/498 (5%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           N +L  +++   + +  E ++ +       + P+   F   I   C+ G V+ A++LF +
Sbjct: 219 NILLTSLVRANEFQKCCEAFDVVCKG----VSPDVYLFTTAINAFCKGGKVEEAVKLFSK 274

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M      P++ T+ T++DGL    R DEA +  ++M   G  PT +T+++L+ GL +   
Sbjct: 275 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 334

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +G A  ++  M  KG  PN + YN LI      G+L+KA+ + D MV+        TY T
Sbjct: 335 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 394

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I G  K G+A +  R+L  M    F+VN+  ++++I  L      + A++   +M+ + 
Sbjct: 395 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 454

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P   + + LI GLC+ GK  +A E+ F+ +N G   +  T ++L+ G  E+GK  +A 
Sbjct: 455 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 514

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            I K++    CV + V Y+ LI G C   KL EA M   +M+ RG KPD   YS +I GL
Sbjct: 515 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 574

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
            N   VEEA++ +++  C      PDV+TY+++++  CK        +  + MM +   P
Sbjct: 575 FNMNKVEEAIQFWDD--CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 632

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTS 636
           + V  N                        IR + R  R S   ++ E M  K +SP ++
Sbjct: 633 NTVVYNHL----------------------IRAYCRSGRLSMALELREDMKHKGISPNSA 670

Query: 637 TWERVVQELCRPKRIQAA 654
           T+  +++ +    R++ A
Sbjct: 671 TYTSLIKGMSIISRVEEA 688



 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 232/455 (50%), Gaps = 9/455 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N++++  I+ G  ++A+E  + +V +K +++  +T  +N +IK  C+ G  DNA +L +
Sbjct: 357 YNNLIDSFIEAGSLNKAIEIKDLMV-SKGLSLTSST--YNTLIKGYCKNGQADNAERLLK 413

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM       +  ++ +++  LC     D A+  + EM +    P       LI+GLCK+G
Sbjct: 414 EMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 473

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +  +A +L      KG + +  T N L+HGLC  G LD+A  +   ++   C+ + V+Y 
Sbjct: 474 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 533

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+I+G     +  +    L  M +R    + Y YS LI GLF   K E+A++ W      
Sbjct: 534 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 593

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+   YS +IDG C+  + +E +E   EM++     N   Y+ L++ +  SG+   A
Sbjct: 594 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 653

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           +E+ +DM       N   Y+ LI G+    ++ EA++++ +M   G +P+V  Y+++I G
Sbjct: 654 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 713

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
               G + +   L  EM        P+  TY +++    +  N++ +  LLN M ++G  
Sbjct: 714 YGKLGQMVKVECLLREMH--SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 771

Query: 577 PDLVTCNIFLTA-LKEK--LEAPQDGTDFLNELAI 608
           PD +T   F+   LK+   LEA + G+D  N  AI
Sbjct: 772 PDSITYKEFIYGYLKQGGVLEAFK-GSDEENYAAI 805



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 224/459 (48%), Gaps = 6/459 (1%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F     A+ K   VEEA++LF  M +E      V +FN+V++ +   G Y  A  F   +
Sbjct: 252 FTTAINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 310

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V      + P  +T+++++K + R   + +A  + +EM  +   P++  Y  L+D   + 
Sbjct: 311 V---ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 367

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             L++A+ + D M   G   T  T+N LI G CKNG+   A +L+  M   G   N+ ++
Sbjct: 368 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 427

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
            ++I  LC     D A+  +  M+     P      T+I+GL K G+      +      
Sbjct: 428 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 487

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           + F V+    + L+ GL + GK ++A ++ K+++ +GC  + V Y+ LI G C   K DE
Sbjct: 488 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 547

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A   L EM+  G   + +TYS L+ G F   K  +A++ W D  +N  + +   YSV+I 
Sbjct: 548 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 607

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C+  +  E +  + +M+S+  +P+ V Y+ +I   C +G +  AL+L  +M       
Sbjct: 608 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM--KHKGI 665

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            P+  TY  L+  +   S +  +  L   M   G +P++
Sbjct: 666 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 704



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 197/410 (48%), Gaps = 6/410 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVD-EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
           + K Y K    + A RL   M+   F+  +   SF SV+ ++    ++  AL F   ++ 
Sbjct: 395 LIKGYCKNGQADNAERLLKEMLSIGFNVNQG--SFTSVICLLCSHLMFDSALRFVGEML- 451

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
               N+ P       +I  +C+ G    A++L+ +   +    D  T   L+ GLC+  +
Sbjct: 452 --LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 509

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           LDEA  +  E+   GC    V++N LI+G C   +L  A   +D M  +G  P+  TY+ 
Sbjct: 510 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 569

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI GL     +++A+   D    +  +P+  TY  +I+G  K  R  +G      M  + 
Sbjct: 570 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 629

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              N  +Y+ LI    + G+   A++L + M  KG  PN+  Y++LI G+  + + +EA+
Sbjct: 630 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 689

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +  EM   G   N F Y++L+ G+ + G+  K   + ++M   N   N++ Y+V+I G 
Sbjct: 690 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 749

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             DG + EA  +  +M  +G  PD + Y   I+G    G V EA K  +E
Sbjct: 750 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799


>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
 gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g46100-like [Cucumis sativus]
          Length = 501

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 223/416 (53%), Gaps = 12/416 (2%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +TF  +I    ++  F+  E +L RM+ EK  V E   + I +AYG+ H   ++IR+FH 
Sbjct: 80  NTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHK 139

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M D FHCK T KS+ SVL ++++E     A  FY    + + M I P   + N++IK  C
Sbjct: 140 MQD-FHCKPTEKSYISVLAILVEENQLKSAFRFYR---DMRKMGIPPTVTSLNVLIKAFC 195

Query: 204 R-LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           +  G +D A+ LFR M    CEPD YTY TL++GLC+   + EA  LL EM+  GC P+ 
Sbjct: 196 KNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSV 255

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+  +I+GLC+   +  A +L+++M  K   PN  TY++L+ G C  G+  +A  +L+ 
Sbjct: 256 VTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILEL 315

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+  +  PN ++Y T++NGL   G+  +   +   M+ + F  +  +Y  +++ L    +
Sbjct: 316 MIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSR 375

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYS-------ALIDGLCRVGKPDEAEEILFEMINNGCAA 435
            ++A     +M+  G KPN + +S        +I GLC +   + A ++   ++  G + 
Sbjct: 376 FQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISI 435

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
              T++SL+K F       K   I  +M  N C+     +S +++  C++ K  +A
Sbjct: 436 TVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMVNCFCDERKACDA 491



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/341 (28%), Positives = 167/341 (48%), Gaps = 10/341 (2%)

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +++ +  +MQ   C PT  ++  ++  L +  +L  A +   +M   G  P   + N LI
Sbjct: 132 DSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLI 191

Query: 305 HGLCL-KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
              C   G +DKA+ L   M    C P+  TYGT+INGL +    V+   +L  ME +  
Sbjct: 192 KAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGC 251

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+++I GL +    ++AM+L + M +K  +PN   YS+L+DG C+ G    A +
Sbjct: 252 SPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARD 311

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           IL  MI      N  +YS+L+ G    GK ++A+EI+  M       +   Y  +++ LC
Sbjct: 312 ILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLC 371

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYS-------SMIHGLCNAGSVEEALKLFNEMLCL 536
           +  + +EA     +M+  G KP+ + +S        +IHGLC   +   A +L+  +L  
Sbjct: 372 DVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTR 431

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
                 D  T+N LL   C + ++  +  +L+ M+  GC P
Sbjct: 432 GISITVD--TFNSLLKCFCNKKDLPKTSRILDEMVINGCIP 470



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 196/395 (49%), Gaps = 19/395 (4%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D+ T+  ++  L   N+   A  LLD M+ +      VT ++L++ +C+    GR  K +
Sbjct: 78  DLNTFSLMISKLISANQFRLAETLLDRMKEE---KIDVTEDILLS-ICR--AYGRIHKPL 131

Query: 286 DNM--FLK----GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           D++  F K     C P E +Y +++  L  +  L  A      M      P   +   +I
Sbjct: 132 DSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLI 191

Query: 340 NGLVKLGRAVDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
               K    +D A  +  +M       + Y Y TLI+GL +     +A +L ++M  KGC
Sbjct: 192 KAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGC 251

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ V Y+++I GLC++   DEA  +L +M +     N FTYSSLM GF ++G   +A +
Sbjct: 252 SPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARD 311

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           I + M +     N + YS L++GLC +GK+ EA  ++ +M  +G KPD   Y  +++ LC
Sbjct: 312 ILELMIQKRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLC 371

Query: 519 NAGSVEEALKLFNEM-LC-LEPKS---QPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           +    +EA    +EM LC ++P        V T+N +++ LC  +N + +  L  S++ R
Sbjct: 372 DVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTR 431

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           G    + T N  L     K + P+  +  L+E+ I
Sbjct: 432 GISITVDTFNSLLKCFCNKKDLPK-TSRILDEMVI 465



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/349 (24%), Positives = 161/349 (46%), Gaps = 17/349 (4%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T++ +I  L        A +LLDRM   K    E    +I     ++ + +D  RV   M
Sbjct: 81  TFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKM 140

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR-VGK 417
           ++      E  Y ++++ L +E + + A + ++ M + G  P     + LI   C+  G 
Sbjct: 141 QDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGT 200

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            D+A  +   M N+GC  +++TY +L+ G        +A E+ ++M    C  + V Y+ 
Sbjct: 201 MDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSPSVVTYTS 260

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           +IHGLC+   + EA  +   M  +  +P+V  YSS++ G C  G    A  +   M+  +
Sbjct: 261 IIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMI--Q 318

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
            + +P++ +Y+ LLN LC +  I+ ++++ + M  +G  PD       +  L + +   Q
Sbjct: 319 KRLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCD-VSRFQ 377

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
           +  +FL+E+ +   K  R +    +              T  RV+  LC
Sbjct: 378 EAANFLDEMVLCGIKPNRITWSLHV-------------RTHNRVIHGLC 413



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 17/274 (6%)

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G K +   +S +I  L    +   AE +L  M             S+ + +    K   +
Sbjct: 74  GFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDS 133

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + ++  M   +C   E  Y  ++  L E+ +L+ A   +  M   G  P V + + +I  
Sbjct: 134 IRVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIPPTVTSLNVLIKA 193

Query: 517 LC-NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            C N+G++++A+ LF  M       +PD +TY  L+N LC+  +I  + +LL  M  +GC
Sbjct: 194 FCKNSGTMDKAMHLFRTMS--NHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGC 251

Query: 576 DPDLVTCNIFLTAL------KEKLEAPQDGTD--------FLNELAIRLFKRQRTSGGFK 621
            P +VT    +  L       E +   +D  D          + L     K   +S    
Sbjct: 252 SPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARD 311

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           I+E+M+QK L P   ++  ++  LC   +I  A+
Sbjct: 312 ILELMIQKRLRPNMISYSTLLNGLCNEGKINEAL 345


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 204/369 (55%), Gaps = 2/369 (0%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M  R   PD+ +Y T+++G C    L + + L+ EMQ+ G  P   T+N +I  LCK+G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +  A +++  M  +G +P+ V Y TLI G C  GN+  A  L D M   + +P+ + Y  
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I GL + G+ ++  +V   M  R    +E  Y+TLI G  K G+ E A  L  QM++ G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             PN V Y+AL DGLC++G+ D A E+L EM   G   N  TY+SL+ G  +SG   +AV
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           ++ ++M       + + ++ L+   C+ G++ +A  +  +ML RG +P V+ ++ +++G 
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C +G +E+  +L   M  LE    P+  TYN L+   C ++N+  + ++   M  RG  P
Sbjct: 301 CMSGMLEDGERLLAWM--LEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMP 358

Query: 578 DLVTCNIFL 586
           D  T NI +
Sbjct: 359 DSNTYNILI 367



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 139/433 (32%), Positives = 220/433 (50%), Gaps = 5/433 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V S+++V+N     G   + L+    I   +   + PN  T+N +I  +C+ G VD+A +
Sbjct: 10  VVSYSTVINGYCLGGELQKVLKL---IQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           + REM  +   PD   Y TL+DG CK   +  A  L DEM+     P  + +  +I GLC
Sbjct: 67  VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           + G++  A K+ + MF +G  P+EVTY TLI G C  G ++KA SL ++MV S   PN V
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  + +GL KLG+      +L  M  +   +N   Y++L++GL K G    A+KL ++M
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
              G  P+T+ ++ L+D  C+ G+  +A E+L EM++ G      T++ LM GF  SG  
Sbjct: 247 EVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGML 306

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
                +   M +   + N   Y+ L+   C    +R    ++  M +RG  PD   Y+ +
Sbjct: 307 EDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNIL 366

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I G C A +++EA  L  EM   E        +YN ++    K+  IS + +L   M   
Sbjct: 367 IKGHCKARNMKEAWFLHKEM--AEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRRE 424

Query: 574 GCDPDLVTCNIFL 586
           G   D    N+F+
Sbjct: 425 GMAADAEIYNLFV 437



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 225/453 (49%), Gaps = 10/453 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           ++ ++I  Y   G+ + +  ++  M+ +     +    S I +    GK   V++A R+ 
Sbjct: 12  SYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK---VDDAERVL 68

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M+++     TV  + ++++   + G    A + ++ +   +   I+P+ + +  VI  
Sbjct: 69  REMINQGIVPDTV-VYTTLIDGFCKLGNIQAAYKLFDEM---EKQRIVPDFIAYTAVICG 124

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +CR G +  A ++F +M  R  EPD  TY TL+DG CK   +++A  L ++M   G  P 
Sbjct: 125 LCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPN 184

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+  L +GLCK G++  A +L+  M  KG   N  TYN+L++GLC  GN+ +AV L++
Sbjct: 185 VVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLME 244

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M  +   P+ +T+ T+++   K G  V    +L  M +R        ++ L++G    G
Sbjct: 245 EMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSG 304

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             ED  +L   M+EKG  PNT  Y++L+   C         EI   M   G   ++ TY+
Sbjct: 305 MLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYN 364

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            L+KG  ++    +A  + K+MA+         Y+ +I G  +  K+ EAR ++ +M   
Sbjct: 365 ILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRRE 424

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           G   D   Y+  +      G++E AL+L +E +
Sbjct: 425 GMAADAEIYNLFVDISYGEGNMETALELCDEAI 457



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 167/331 (50%), Gaps = 16/331 (4%)

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+ V+Y T+ING    G      +++  M+ +    N Y Y+++I  L K GK +DA ++
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            ++M+ +G  P+TVVY+ LIDG C++G    A ++  EM       +   Y++++ G   
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            GK  +A +++  M       +EV Y+ LI G C+ G++ +A  +  QM+  G  P+VV 
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+++  GLC  G V+ A +L +EM       Q ++ TYN L+N LCK  NI  ++ L+  
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMC--GKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEE 245

Query: 570 MMDRGCDPDLVTCNIFLTA-------------LKEKLE-APQDGTDFLNELAIRLFKRQR 615
           M   G  PD +T    + A             L+E L+   Q      N L         
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGM 305

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              G +++  ML+K + P T+T+  ++++ C
Sbjct: 306 LEDGERLLAWMLEKGIMPNTTTYNSLMKQYC 336



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 193/396 (48%), Gaps = 14/396 (3%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D+  Y+ LI  +   G+ ++   +   M +++ V    ++  +     +   + EA ++F
Sbjct: 79  DTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVF 138

Query: 142 HTMVDEFHCKRTVK----SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           + M       R V+    ++ ++++   + G   +A   +N +V +    + PN +T+  
Sbjct: 139 NKMFS-----RGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQS---GLTPNVVTYTA 190

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +   +C+LG VD A +L  EM  +  + +I TY +L++GLCK   + +AV L++EM+V G
Sbjct: 191 LADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAG 250

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
            +P  +TF  L++  CK GE+ +A +L+  M  +G  P  +T+N L++G C+ G L+   
Sbjct: 251 MYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGE 310

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            LL  M+    MPN  TY +++              +   M  R    +   Y+ LI G 
Sbjct: 311 RLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGH 370

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K    ++A  L K+M EKG       Y+++I G  +  K  EA E+  EM   G AA+A
Sbjct: 371 CKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADA 430

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
             Y+  +   +  G    A+E+  D A  NC  N +
Sbjct: 431 EIYNLFVDISYGEGNMETALELC-DEAIENCFLNRI 465



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 23/223 (10%)

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G A +  +YS+++ G+   G+  K +++ ++M       N   Y+ +I  LC+ GK+ +A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             V  +M+++G  PD V Y+++I G C  G+++ A KLF+EM   + +  PD   Y  ++
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEME--KQRIVPDFIAYTAVI 122

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
             LC+   +  +  + N M  RG +PD VT    +           DG            
Sbjct: 123 CGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLI-----------DG----------YC 161

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           K       F +   M+Q  L+P   T+  +   LC+  ++  A
Sbjct: 162 KSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTA 204


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  233 bits (593), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 143/488 (29%), Positives = 232/488 (47%), Gaps = 35/488 (7%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           N  L V+++ G    A+     +   +     P       +IK +C  G    A ++   
Sbjct: 60  NDRLRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAA----LIKKLCASGRTAEARRVLA- 114

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
               +CEPD+ +Y  ++ G C   +LD A  L+  M ++   P   T+N LI GLC  G 
Sbjct: 115 ----SCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGR 167

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
              A  ++D+M  +GC+P+ VTY  L+   C +    +AV LLD M    C P+ VTY  
Sbjct: 168 TDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNV 227

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           ++NG+ + GR  D    L S+       N   Y+ ++ GL    + EDA KL  +M  KG
Sbjct: 228 VVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKG 287

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             PN V ++ LI  LCR G  + A EIL ++   GC  N+ +Y+ ++  F +  K  +A+
Sbjct: 288 RPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAM 347

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
              + M  + C  + V Y+ L+  LC  G++  A  +  Q+  +GC P +++Y+++I GL
Sbjct: 348 AFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGL 407

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
             AG  EEAL+L NEM+      QPD+ TY+ + + LC++  I  +I     + D G  P
Sbjct: 408 TKAGKTEEALELLNEMV--TKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRP 465

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           + V                       N + + L KR+ T     +   M+     P  ST
Sbjct: 466 NTV---------------------LYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNEST 504

Query: 638 WERVVQEL 645
           +  +++ L
Sbjct: 505 YTILIEGL 512



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 222/425 (52%), Gaps = 8/425 (1%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C+  V S+N+++      G     L+    +V A  M   P+T T+N +I+ +C  G  D
Sbjct: 116 CEPDVMSYNAMVAGYCVTG----QLDNARRLVAAMPME--PDTYTYNTLIRGLCGRGRTD 169

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           NA+ +  +M  R C PD+ TY  L++  CK +   +AV LLDEM+  GC P  VT+NV++
Sbjct: 170 NALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVV 229

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           NG+C+ G +  A + + ++   GC PN V+YN ++ GLC     + A  L+  M      
Sbjct: 230 NGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRP 289

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PN VT+  +I+ L + G       +L  + +     N   Y+ ++    K+ K + AM  
Sbjct: 290 PNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 349

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            + M+  GC P+ V Y+ L+  LCR G+ D A E+L ++ + GC     +Y++++ G  +
Sbjct: 350 VELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 409

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           +GK  +A+E+  +M       + + YS +  GLC +G++ EA   + ++   G +P+ V 
Sbjct: 410 AGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVL 469

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y++++ GLC   +   A+ LF  M  +     P+  TY IL+  L  +  +  + +++  
Sbjct: 470 YNAILLGLCKRRATHSAIDLFTYM--VSNGCMPNESTYTILIEGLAYEGLVKEAREMMAE 527

Query: 570 MMDRG 574
           +  RG
Sbjct: 528 LCSRG 532



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 207/385 (53%), Gaps = 4/385 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI+     G   +   VL  M R   V    ++  + +A  K    ++A++L   M
Sbjct: 154 TYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEM 213

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D+  C   + ++N V+N I QEG    A+EF   +         PNT+++N+V+K +C 
Sbjct: 214 RDK-GCAPDIVTYNVVVNGICQEGRVDDAMEFLKSL---PSYGCEPNTVSYNIVLKGLCT 269

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               ++A +L  EM  +   P++ T+  L+  LC+   ++ A+ +LD++   GC P  ++
Sbjct: 270 AERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLS 329

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N +++  CK  ++ RA   V+ M   GC P+ V+YNTL+  LC  G +D AV LL ++ 
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLK 389

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C P  ++Y T+I+GL K G+  +   +L  M  +    +   YST+ SGL +EG+ E
Sbjct: 390 DKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIE 449

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+K + ++ + G +PNTV+Y+A++ GLC+      A ++   M++NGC  N  TY+ L+
Sbjct: 450 EAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILI 509

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCV 469
           +G    G   +A E+  ++     V
Sbjct: 510 EGLAYEGLVKEAREMMAELCSRGVV 534



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 210/421 (49%), Gaps = 36/421 (8%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPV-TFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           L +   L+EA+ L++ M   G  P+       LI  LC +G    A ++     L  C P
Sbjct: 66  LVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRV-----LASCEP 118

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVDGARV 354
           + ++YN ++ G C+ G LD A     R+VA+  M P+  TY T+I GL   GR  +   V
Sbjct: 119 DVMSYNAMVAGYCVTGQLDNA----RRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAV 174

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M  R    +   Y+ L+    K    + A+KL  +M +KGC P+ V Y+ +++G+C+
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G+ D+A E L  + + GC  N  +Y+ ++KG   + +   A ++  +M++     N V 
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           +++LI  LC  G +  A  +  Q+   GC P+ ++Y+ ++H  C    ++ A+  F E++
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMA-FVELM 353

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            +     PD+ +YN LL ALC+   +  +++LL+ + D+GC P L++ N  +        
Sbjct: 354 -VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVI-------- 404

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
              DG          L K  +T    +++  M+ K L P   T+  +   LCR  RI+ A
Sbjct: 405 ---DG----------LTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEA 451

Query: 655 I 655
           I
Sbjct: 452 I 452


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 237/460 (51%), Gaps = 40/460 (8%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           DIY++  L+   C  ++L  A+    ++   G  PT VTFN L++GLC    +  A  L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M    C PN VT+ TL++GLC +G + +AV+LLDRMV     PN++TYGTI++G+ K+
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 346 GRAVDGARVLMSMEERKFHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           G  V    +L  MEE   H+  +  IYS +I GL+K+G+  DA  L+ +M +KG  P+ V
Sbjct: 130 GDTVSALNLLRKMEELS-HIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIV 188

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            YS +I+G C  GK  EA+ +L EM+    + +  T+S L+    + G  + A ++ ++M
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS-----------RGCKPDVVAYSS 512
             +    N V  + L+ GLC+ GKL++A  ++  M              G +PDV  Y+ 
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNI 308

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +I GL N G   EA +L+ EM    P     PD  TY+ ++N LCKQS +  +  + +SM
Sbjct: 309 LISGLINEGKFLEAEELYEEM----PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM 364

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA--------------IRLFKR-QR 615
             +   P++VT N  +T    K     DG +   E+               IR F++   
Sbjct: 365 GSKSFSPNIVTFNTLITGYC-KAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +G   I + M+   + P T T   ++  L   + ++ A+
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKAL 463



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 228/412 (55%), Gaps = 20/412 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ LFH M     CK  V +F +++N + +EG    A+   + +V      + PN +
Sbjct: 66  VSEALDLFHQM-----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVED---GLQPNQI 117

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           T+  ++  +C++G   +A+ L R+M  + + +PD+  Y  ++DGL K+ R  +A  L  E
Sbjct: 118 TYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE 177

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           MQ  G FP  VT++ +ING C +G+   A +L+  M ++   P+ VT++ LI+ L  +G+
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE----- 367
           L+ A  LL  M++S   PN VT  T+++GL   G+  D   +  +M++    ++      
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297

Query: 368 ------YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
                   Y+ LISGL  EGK  +A +L+++M  +G  P+TV YS++I+GLC+  + DEA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            ++   M +   + N  T+++L+ G+ ++G     +E++ +M +   V N + Y  LI G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             + G +  +  ++ +M+S G  PD +   +M+ GL +   +++AL +  E+
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 204/428 (47%), Gaps = 53/428 (12%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +TFN ++  +C    V  A+ LF +M    C+P++ T+ TLM+GLC+E R+ EAV L
Sbjct: 48  PTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 103

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV------------------------ 285
           LD M  DG  P  +T+  +++G+CK G+   A  L+                        
Sbjct: 104 LDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLW 163

Query: 286 --------DNMFL----KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
                    N+F+    KG  P+ VTY+ +I+G C  G   +A  LL  M+  K  P+ V
Sbjct: 164 KDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVV 223

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           T+  +IN LVK G       +L  M       N    +TL+ GL   GK +DA++++K M
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283

Query: 394 MEK-----------GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +            G +P+   Y+ LI GL   GK  EAEE+  EM + G   +  TYSS
Sbjct: 284 QKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSS 343

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G  +  +  +A +++  M   +   N V ++ LI G C+ G + +   ++ +M  RG
Sbjct: 344 MINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRG 403

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
              + + Y ++I G    G++  +L +F EM  +     PD  T   +L  L  +  +  
Sbjct: 404 IVANAITYITLIRGFRKVGNINGSLDIFQEM--ISSGVYPDTITIRNMLTGLWSKEELKK 461

Query: 563 SIDLLNSM 570
           ++ +L  +
Sbjct: 462 ALAMLEEL 469



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 129/266 (48%), Gaps = 9/266 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I  + +SG +   + +L  M   K      +F  +  A  K   +  A  L   M
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI------VNAKHM--NILPNTLTFN 196
           +    C   V + N++L+ +   G    ALE +  +      ++A H    + P+  T+N
Sbjct: 249 ISSGVCPNVV-TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           ++I  +   G    A +L+ EMP R   PD  TY ++++GLCK++RLDEA  + D M   
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P  VTFN LI G CK G +    +L   M  +G + N +TY TLI G    GN++ +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGL 342
           + +   M++S   P+ +T   ++ GL
Sbjct: 428 LDIFQEMISSGVYPDTITIRNMLTGL 453



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 121/255 (47%), Gaps = 19/255 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF  LI      GD  S + +L  M        VV   + +      GK   +++A+ +F
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK---LKDALEMF 280

Query: 142 HTM------VDEFHC----KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
             M      +D  H     +  V+++N +++ +I EG +  A E Y  +    H  I+P+
Sbjct: 281 KAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM---PHRGIVPD 337

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T+T++ +I  +C+   +D A Q+F  M  ++  P+I T+ TL+ G CK   +D+ + L  
Sbjct: 338 TVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFC 397

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM   G     +T+  LI G  K G +  +  +   M   G  P+ +T   ++ GL  K 
Sbjct: 398 EMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKE 457

Query: 312 NLDKAVSLLDRMVAS 326
            L KA+++L+ +  S
Sbjct: 458 ELKKALAMLEELQMS 472



 Score = 45.4 bits (106), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 27/151 (17%)

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           D+ +++ +I   C+   +  AL  F ++  L     P + T+N LL+ LC +  +S ++D
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKL--GFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
           L + M    C P++VT    +  L                      +  R      +++ 
Sbjct: 72  LFHQM----CKPNVVTFTTLMNGL---------------------CREGRVVEAVALLDR 106

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           M++  L P   T+  +V  +C+     +A+N
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALN 137


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 160/584 (27%), Positives = 264/584 (45%), Gaps = 85/584 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T++ +I+    + +  +L  +L++M+ E+    + SFI +  +Y  + L + A+++F+  
Sbjct: 75  TYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYR- 133

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEG--LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           + EF CK TVK +N +L+ ++ E    +H     Y    N +   + PN  T+N+++K +
Sbjct: 134 IKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYE---NMRGEGMEPNVFTYNVLLKAL 190

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCT------------------------------ 232
           C+ G +D A +L  EM  R C PD  +Y T                              
Sbjct: 191 CKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVC 250

Query: 233 --LMDGLCKENRLDEAVLLLDEM---QVD------------------------------- 256
             L+ GLC+E R+ E   L+DEM    VD                               
Sbjct: 251 NALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIR 310

Query: 257 -GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            GC P   TF+ L+ G    G +G    L   M L+G  PN V YNTL++GLC  GNL +
Sbjct: 311 RGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAE 370

Query: 316 AVSLLDRMVAS-KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           AV +  RM     C PN  TY T+++G VK G     + V   M       N  +Y++++
Sbjct: 371 AVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMV 430

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L K    + A +L   M   GC P  V ++  I GLC  G+   A  ++ +M   GC 
Sbjct: 431 DVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCL 490

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  TY+ L+ G F   +  +A E+ +++ +     N V Y+ +++G    GK      V
Sbjct: 491 PDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQV 550

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM-----LCLEPKSQPDVFTYNI 549
             +ML  G KPD +  + +I+     G V  A++  + +     LC      PD+  +  
Sbjct: 551 LGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELC------PDIIAHTS 604

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
           LL  +C    I  +I  LN M+++G  P++ T ++ +    +KL
Sbjct: 605 LLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKL 648



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 241/489 (49%), Gaps = 48/489 (9%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP-NTLTF 195
           A++ F  + +    K T  +++    V+I++   +  L+  ++I++   +  +P +  +F
Sbjct: 56  ALQHFQYLTNTLAFKHTPLTYH----VMIEKLGRNSELDALHYILHQMKIERIPCSQDSF 111

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE--NRLDEAVLLLDEM 253
             V+ +    GL D A+++F  +    C+P +  Y  L+D L  E  N+      + + M
Sbjct: 112 ICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENM 171

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY------------- 300
           + +G  P   T+NVL+  LCKNG+L  A KL+  M  +GC+P+ V+Y             
Sbjct: 172 RGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRV 231

Query: 301 -------------------NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
                              N LI GLC +G + +   L+D MV +   PN V+Y ++I+ 
Sbjct: 232 EEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISW 291

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L  +G       VL  M  R    N + +S+L+ G F  G+  + + LW+ M+ +G +PN
Sbjct: 292 LSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPN 351

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGFFESGKGHKAVEIW 460
            VVY+ L++GLC  G   EA ++   M  +  C  N  TYS+L+ GF ++G    A E+W
Sbjct: 352 VVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVW 411

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
             M       N V Y+ ++  LC++    +A  +   M + GC P VV +++ I GLC  
Sbjct: 412 NKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCG 471

Query: 521 GSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           G V  A+++ ++M    CL     PD  TYN LL+ L   + +  + +L+  + +R  + 
Sbjct: 472 GRVLWAMRVVDQMQRYGCL-----PDTRTYNELLDGLFSVNELKEACELIRELEERKVEL 526

Query: 578 DLVTCNIFL 586
           +LVT N  +
Sbjct: 527 NLVTYNTVM 535



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 154/333 (46%), Gaps = 38/333 (11%)

Query: 333 VTYGTIINGLVKLGR--AVDGAR-VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           +TY  +I    KLGR   +D    +L  M+  +   ++  +  +++     G  + A+K+
Sbjct: 74  LTYHVMIE---KLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKM 130

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN----GCAANAFTYSSLMK 445
           + ++ E GCKP   +Y+ L+D L  +G+      ++  +  N    G   N FTY+ L+K
Sbjct: 131 FYRIKEFGCKPTVKIYNHLLDAL--LGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLK 188

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
              ++GK   A ++  +M+K  CV + V Y+ ++  +CEDG++ EAR V  +  + G   
Sbjct: 189 ALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGV-- 246

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
            V   +++I GLC  G V E   L +EM  +     P+V +Y+ +++ L     +  ++ 
Sbjct: 247 -VSVCNALICGLCREGRVGEVFGLMDEM--VGNGVDPNVVSYSSVISWLSDVGEVELALA 303

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
           +L  M+ RGC P++ T                      + L    F   R   G  +  V
Sbjct: 304 VLGKMIRRGCRPNVHT---------------------FSSLMKGYFLGGRVGEGVGLWRV 342

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
           M+ + + P    +  ++  LC    +  A++ C
Sbjct: 343 MVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVC 375



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 113/281 (40%), Gaps = 46/281 (16%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           +T+ +L+  +  +GD +    V  +M        VV+  S + +     K  + ++A RL
Sbjct: 389 TTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLC---KNSMFDQAYRL 445

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
              M  +  C  TV +FN+ +  +   G   R L     +   +    LP+T T+N ++ 
Sbjct: 446 IDNMATD-GCPPTVVTFNTFIKGLCCGG---RVLWAMRVVDQMQRYGCLPDTRTYNELLD 501

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +  +  +  A +L RE+  R  E ++ TY T+M G     + +  + +L  M V+G  P
Sbjct: 502 GLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKP 561

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVD---------------------------------- 286
             +T NV+I    K G++  A + +D                                  
Sbjct: 562 DAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVY 621

Query: 287 --NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
              M  KG  PN  T++ L+ G   K      + +LD ++ 
Sbjct: 622 LNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDILG 662


>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 647

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 150/491 (30%), Positives = 243/491 (49%), Gaps = 7/491 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SLI   A +G   S++ V  + +    ++   S   + K++G   +VEE + ++  M 
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRM- 205

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E   + ++ S+N ++N ++       A   +  + N K   I P+ +T+N +IK  C +
Sbjct: 206 KENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGK---IGPDVVTYNTMIKGYCEV 262

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G    A +  + M +RN  PD  TY TL+     E   D  + L  EM   G    P  +
Sbjct: 263 GKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVY 322

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           +++I GLCK+G+      + +NM  KGC  N   Y  LI      GN+ +A+ L  RM  
Sbjct: 323 SLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKK 382

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               P+EVTYG I+N L K GR  +    +     +   VN   YS+LI GL K G+ ++
Sbjct: 383 EGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDE 442

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A +++ +M++KGC P++  Y+ALID L + GK DEA  +   M  +GC    +TY+ L+ 
Sbjct: 443 AERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILIT 502

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G F   +  +A+ +W  M           +  L  GLC  GK+  A  +  +M   G  P
Sbjct: 503 GLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIP 562

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           +  A+  MI+ LC AG ++EA KL + ++    +    V T  +L+NAL K  N   ++ 
Sbjct: 563 E-TAFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRT--VLINALRKAGNADLALK 619

Query: 566 LLNSMMDRGCD 576
           L+ S +  G D
Sbjct: 620 LMRSKIGIGYD 630



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 248/536 (46%), Gaps = 51/536 (9%)

Query: 115 VVLEKSFI-FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA 173
           + L  SF+ FI ++       + AIR F     +      ++ + S+++V+   G+    
Sbjct: 104 IKLSPSFVSFILRSTELQTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSV 163

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
              ++     K M ++    + N +IK+   LG+V+  + ++R M     EP +++Y  L
Sbjct: 164 KSVFSKF---KEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFSYNFL 220

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           ++GL     ++ A  + + M+     P  VT+N +I G C+ G+  +A + +  M L+  
Sbjct: 221 VNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNV 280

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            P+++TY TLI     +G+ D  + L   M           Y  +I GL K G+ V+G  
Sbjct: 281 APDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYT 340

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP------------- 400
           V  +M  +    N  IY+ LI    K G   +AM L+K+M ++G +P             
Sbjct: 341 VFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLC 400

Query: 401 ----------------------NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
                                 N + YS+LIDGL + G+ DEAE I +EM+  GC  +++
Sbjct: 401 KSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSY 460

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            Y++L+    + GK  +A+ + K M  + C      Y++LI GL  + +  EA  +W  M
Sbjct: 461 CYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLM 520

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           + +G  P   A+ ++  GLC +G V  A K+ +EM    P        ++ ++N LCK  
Sbjct: 521 IDKGITPTAAAFRALSTGLCLSGKVARACKILDEM---APMGVIPETAFDDMINILCKAG 577

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
            I  +  L + ++DRG +       + + AL++   A         +LA++L + +
Sbjct: 578 RIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNA---------DLALKLMRSK 624



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 196/425 (46%), Gaps = 23/425 (5%)

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y +L+D L     LD    +  + +  G   T  + N LI      G +     +   M 
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             G  P+  +YN L++GL     ++ A  + + M   K  P+ VTY T+I G  ++G+  
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTR 266

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
                L +ME R    ++  Y TLI   + EG  +  + L+ +M EKG +    VYS +I
Sbjct: 267 KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVI 326

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC+ GK  E   +   MI+ GC AN   Y++L+    + G   +A+ ++K M K    
Sbjct: 327 GGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLE 386

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +EV Y V+++ LC+ G+L EA         +G   + + YSS+I GL  +G V+EA ++
Sbjct: 387 PDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERI 446

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F EM+  +    PD + YN L++AL K   I  ++ L   M   GCD  + T  I +T  
Sbjct: 447 FYEMV--KKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITG- 503

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                               LF+  R      + ++M+ K ++P  + +  +   LC   
Sbjct: 504 --------------------LFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSG 543

Query: 650 RIQAA 654
           ++  A
Sbjct: 544 KVARA 548



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 121/297 (40%), Gaps = 23/297 (7%)

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           +++K+  N   Y +LI  L   G  +    ++ +  E G        ++LI     +G  
Sbjct: 136 KQKKYTHNLECYVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMV 195

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           +E   +   M  NG   + F+Y+ L+ G   S     A  +++ M       + V Y+ +
Sbjct: 196 EEVLWVWRRMKENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTM 255

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I G CE GK R+A      M  R   PD + Y ++I      G  +  L L++EM     
Sbjct: 256 IKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGL 315

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
           +  P V  Y++++  LCK         +  +M+ +GC  ++    I+   +    +    
Sbjct: 316 EIPPHV--YSLVIGGLCKDGKRVEGYTVFENMISKGCKANVA---IYTALIDSNAKCGNM 370

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           G       A+ LFKR +  G            L P   T+  +V  LC+  R+  A+
Sbjct: 371 GE------AMLLFKRMKKEG------------LEPDEVTYGVIVNSLCKSGRLDEAL 409


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 151/515 (29%), Positives = 251/515 (48%), Gaps = 15/515 (2%)

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +++D     R   S+N+VL  + + G + RA      +    H    PN +++ ++++ +
Sbjct: 66  SLLDALPSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRAL 125

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C   L D A+ L R M       D+ TY TL+ GLC    +D+AV L+ EM   G  P  
Sbjct: 126 CADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNV 185

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V ++ L+ G CK+G      K+   M  KG  P+ V Y  LI  LC  G   KA  ++D 
Sbjct: 186 VVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDM 245

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MV     PN VTY  +IN + K G   +   VL  M E+    +   Y+TLI GL    +
Sbjct: 246 MVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLE 305

Query: 383 AEDAMKLWKQMMEKG--CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            ++AM L ++M+      KPN V ++++I GLC +G+  +A ++   M   GC  N  TY
Sbjct: 306 MDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTY 365

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+ G     K  KA+E+  +M       +   YS+LI G C+  ++  A  + + M  
Sbjct: 366 NLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRD 425

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           RG +P++  Y  ++  +C  G +E A  LFNEM   +     DV  Y+ +++  CK  ++
Sbjct: 426 RGIEPELFHYIPLLVAMCEQGMMERARNLFNEM---DNNFPLDVVAYSTMIHGACKAGDL 482

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQD------GTDFLNELAI--RL 610
             + +LL S++D G  PD VT +I +   A    +EA          + FL ++A+   L
Sbjct: 483 KTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSL 542

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            +   T G    V  ++++ ++   +   +++  L
Sbjct: 543 IQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 188/380 (49%), Gaps = 27/380 (7%)

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS---KCMPNEVT 334
           LG A  L+D +     + + V+YNT++  LC +G+ D+A +LL  M       C PN V+
Sbjct: 61  LGEATSLLDAL---PSVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y  ++  L     A     +L SM       +   Y TLI GL    + + A++L  +M 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           E G +PN VVYS+L+ G C+ G+ ++  ++  EM   G   +   Y+ L+    + GK  
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           KA  +   M +     N V Y+VLI+ +C++G ++EA  V  +M  +G  PDVV Y+++I
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLI 297

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GL +   ++EA+ L  EM+  +   +P+V T+N ++  LC    +  +  +   M + G
Sbjct: 298 KGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETG 357

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
           C  +LVT N+ +  L                  +R+ K ++     ++++ M    L P 
Sbjct: 358 CMVNLVTYNLLIGGL------------------LRVHKVRK---AMELMDEMTSLGLEPD 396

Query: 635 TSTWERVVQELCRPKRIQAA 654
           + T+  +++  C+  ++  A
Sbjct: 397 SFTYSILIKGFCKMWQVDRA 416



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 177/383 (46%), Gaps = 11/383 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           +  LI      G  K    V+  M R   E  VV   ++  +     K   V+EAI +  
Sbjct: 223 YTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVV---TYNVLINCMCKEGSVKEAIGVLK 279

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M  E      V ++N+++  +        A+     +V  K++ + PN +TFN VI+ +
Sbjct: 280 KM-SEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNI-VKPNVVTFNSVIQGL 337

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C +G +  A Q+   M    C  ++ TY  L+ GL + +++ +A+ L+DEM   G  P  
Sbjct: 338 CDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDS 397

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+++LI G CK  ++ RA  L+  M  +G  P    Y  L+  +C +G +++A +L + 
Sbjct: 398 FTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNE 457

Query: 323 MVASKCMP-NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           M      P + V Y T+I+G  K G       +L S+ +     +   YS +I+   K G
Sbjct: 458 M--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSG 515

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             E A  + KQM   G  P+  V+ +LI G    G+ ++  E++ EMI    A ++   S
Sbjct: 516 DMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIIS 575

Query: 442 SLMKGFFESGKGHKAVEIWKDMA 464
           +L      S +G   ++   D +
Sbjct: 576 TLSTSLVASNEGKALLQSLPDFS 598



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 7/326 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI      G  K    VL +M  +       ++  + K       ++EA+ L   M
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 145 VDEFH-CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           V   +  K  V +FNSV+  +   G   +A +    +   +    + N +T+NL+I  + 
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMM---EETGCMVNLVTYNLLIGGLL 373

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R+  V  A++L  EM     EPD +TY  L+ G CK  ++D A  LL  M+  G  P   
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLP-NEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            +  L+  +C+ G + RA  L + M      P + V Y+T+IHG C  G+L  A  LL  
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEM--DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKS 491

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           +V     P+ VTY  +IN   K G       VL  M    F  +  ++ +LI G   +G+
Sbjct: 492 IVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGE 551

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSAL 408
               ++L ++M+ K    ++ + S L
Sbjct: 552 INKVLELIREMITKNIALDSKIISTL 577



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 106/224 (47%), Gaps = 26/224 (11%)

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMA---KNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           +A +Y++++      G   +A  + + M+      C  N V Y+VL+  LC D    +A 
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +   M S G + DVV Y ++I GLC+A  V++A++L  EM   E   +P+V  Y+ LL 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC--ESGIEPNVVVYSSLLQ 193

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             CK         +   M ++G +PD+V      T L + L               ++ K
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVV----MYTGLIDSL--------------CKVGK 235

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            ++  G   ++++M+++ L P   T+  ++  +C+   ++ AI 
Sbjct: 236 AKKAHG---VMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIG 276



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 127/295 (43%), Gaps = 40/295 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ +LI+  ++  +      +L  M R K +V      F  + +       + +A ++  
Sbjct: 292 TYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQV-R 350

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M++E  C   + ++N ++  +++     +A+E  + + +   + + P++ T++++IK  
Sbjct: 351 AMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTS---LGLEPDSFTYSILIKGF 407

Query: 203 CRLGLVDNAIQLFREMPVRNCEP----------------------------------DIY 228
           C++  VD A  L   M  R  EP                                  D+ 
Sbjct: 408 CKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVV 467

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
            Y T++ G CK   L  A  LL  +  +G  P  VT++++IN   K+G++  A  ++  M
Sbjct: 468 AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
              G LP+   +++LI G   KG ++K + L+  M+      +     T+   LV
Sbjct: 528 TASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLV 582


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 241/476 (50%), Gaps = 45/476 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EAI L   M   F C     S+N++L+V+ ++G  + A +    +++ K+  + PN  
Sbjct: 64  LSEAIGLIGKM-KHFSCFPDNVSYNTILDVLCKKGKLNEARDL---LLDMKNNGLFPNRN 119

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TFN+++   C+LG +  A ++   M   N  PD+ TY TL+ GLCK+ ++DEA  L DEM
Sbjct: 120 TFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEM 179

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +     P  VT+N+LING  +     +  +L+D M  KG  PN VTYN ++     +G +
Sbjct: 180 ENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKM 239

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV------------------------ 349
           D A + L +M  S   P+ VT+ T+ NG  K GR                          
Sbjct: 240 DNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTI 299

Query: 350 -----------DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
                      D  ++L S  +R + V+E  Y TLI G FK GK+      W +M EK  
Sbjct: 300 LHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKS----XXWDEMKEKEI 355

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ + Y  +I GLCR GK D++ +   E++ +G   +  TY++++ G+   G+  KA  
Sbjct: 356 IPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFH 415

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
               M K +   +    ++L+ GLC +G L +A  ++   +S+G   D V ++++I GLC
Sbjct: 416 FRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLC 475

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
             G  EEA  L  EM   E K  PD +T+N +L+AL     +  + + ++ ++++G
Sbjct: 476 EEGRFEEAFDLLAEM--EEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQG 529



 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 145/466 (31%), Positives = 236/466 (50%), Gaps = 27/466 (5%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT TFN++I   C    +  AI L  +M   +C PD  +Y T++D LCK+ +L+EA  LL
Sbjct: 47  NTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLL 106

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M+ +G FP   TFN+L++G CK G L  AA+++D M     LP+  TY TLI GLC  
Sbjct: 107 LDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKD 166

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D+A  L D M   K +P+ VTY  +ING  +   ++ G  ++  ME +    N   Y
Sbjct: 167 GKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTY 226

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + ++    KEGK ++A    ++M E G  P+ V ++ L +G C+ G+  EA  ++ EM  
Sbjct: 227 NVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSR 286

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N+ T ++++       K   A ++    +K     +EV Y  LI G  + GK   
Sbjct: 287 KGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGK--- 343

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
               W +M  +   P ++ Y +MI GLC +G  ++++   NE+  LE    PD  TYN +
Sbjct: 344 -SXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNEL--LESGLVPDQTTYNTI 400

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +   C++  +  +    N M+ +   PDL TCNI +  L          T+ + + A++L
Sbjct: 401 ILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGL---------CTEGMLDKALKL 451

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           FK   + G  K ++ +          T+  ++  LC   R + A +
Sbjct: 452 FKTWISKG--KAIDAV----------TFNTIISGLCEEGRFEEAFD 485



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 225/476 (47%), Gaps = 29/476 (6%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y K   ++EA  +   M    +    V+++ +++  + ++G    A    + 
Sbjct: 120 TFNILVSGYCKLGWLKEAAEVIDIMARN-NVLPDVRTYTTLIGGLCKDGKIDEAFRLRDE 178

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + N K   +LP+ +T+N++I             +L  EM  +  +P+  TY  ++    K
Sbjct: 179 MENLK---LLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVK 235

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E ++D A   L +M+  G  P  VTFN L NG CK G L  A +++D M  KG   N VT
Sbjct: 236 EGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 295

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
            NT++H LC +  LD A  LL          +EV+YGT+I G  K+G++         M+
Sbjct: 296 LNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDE----MK 351

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E++   +   Y T+I GL + GK + ++    +++E G  P+   Y+ +I G CR G+ D
Sbjct: 352 EKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVD 411

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A     +M+      + FT + L++G    G   KA++++K         + V ++ +I
Sbjct: 412 KAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTII 471

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL----------KL 529
            GLCE+G+  EA  +  +M  +   PD   +++++  L +AG ++EA           KL
Sbjct: 472 SGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKL 531

Query: 530 FNEMLCLEPKS-----------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            ++ + L  +             P+   ++  +N LC Q     ++ ++     +G
Sbjct: 532 QDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKG 587



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 177/389 (45%), Gaps = 33/389 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +++ Y   G   +    L +M          +F  +   Y KA  + EA R    M
Sbjct: 225 TYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFR----M 280

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALE-FYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           +DE   ++ +K  +  LN I+      R L+  Y  + +A       + +++  +I    
Sbjct: 281 MDEMS-RKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYF 339

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           ++G        + EM  +   P I TY T++ GLC+  + D+++   +E+   G  P   
Sbjct: 340 KVG----KSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQT 395

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+N +I G C+ G++ +A    + M  K   P+  T N L+ GLC +G LDKA+ L    
Sbjct: 396 TYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTW 455

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           ++     + VT+ TII+GL + GR  +   +L  MEE+K   + Y ++ ++S L   G+ 
Sbjct: 456 ISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRM 515

Query: 384 EDAMKLWKQMMEKG-----------------------CKPNTVVYSALIDGLCRVGKPDE 420
           ++A +    ++E+G                         PN+V +S  I+ LC  GK  +
Sbjct: 516 KEAEEFMSGIVEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKD 575

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFE 449
           A  ++ E    G   +  TY SLM+G  +
Sbjct: 576 AMHMIQESTQKGIILHKSTYISLMEGLIK 604



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 175/383 (45%), Gaps = 62/383 (16%)

Query: 330 PNEVTYGTIINGLVK--------LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           PN +T  T+I  LV+        L +A+    + + +E     VN   ++ LI G   E 
Sbjct: 8   PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVE-----VNTNTFNILICGCCIEN 62

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K  +A+ L  +M    C P+ V Y+ ++D LC+ GK +EA ++L +M NNG   N  T++
Sbjct: 63  KLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFN 122

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            L+ G+ + G   +A E+   MA+NN + +   Y+ LI GLC+DGK+ EA  +  +M + 
Sbjct: 123 ILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENL 182

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCLEPKS------------------- 540
              P VV Y+ +I+G     S  +  +L +EM    ++P +                   
Sbjct: 183 KLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNA 242

Query: 541 ------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
                        PD  T+N L N  CK   +S +  +++ M  +G   + VT N  L  
Sbjct: 243 GNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHT 302

Query: 589 L--KEKLEAPQDGTDFLNELAIRLFKRQRTSGG------FKI-----VEVMLQKFLSPQT 635
           L  + KL+   D    L+  + R +     S G      FK+      + M +K + P  
Sbjct: 303 LCGERKLD---DAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSI 359

Query: 636 STWERVVQELCRPKRIQAAINKC 658
            T+  ++  LCR  +   +I+KC
Sbjct: 360 ITYGTMIGGLCRSGKTDQSIDKC 382


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/460 (32%), Positives = 237/460 (51%), Gaps = 40/460 (8%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           DIY++  L+   C  ++L  A+    ++   G  PT VTFN L++GLC    +  A  L 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M    C PN VT+ TL++GLC +G + +AV+LLDRMV     PN++TYGTI++G+ K+
Sbjct: 74  HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 346 GRAVDGARVLMSMEERKFHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           G  V    +L  MEE   H+  +  IYS +I GL+K+G+  DA  L+ +M +KG  P+ V
Sbjct: 130 GDTVSALNLLRKMEELS-HIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIV 188

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            YS +I+G C  GK  EA+ +L EM+    + +  T+S L+    + G  + A ++ ++M
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS-----------RGCKPDVVAYSS 512
             +    N V  + L+ GLC+ GKL++A  ++  M              G +PDV  Y+ 
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNI 308

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +I GL N G   EA +L+ EM    P     PD  TY+ ++N LCKQS +  +  + +SM
Sbjct: 309 LISGLINEGKFLEAEELYEEM----PHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM 364

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA--------------IRLFKR-QR 615
             +   P++VT N  +T    K     DG +   E+               IR F++   
Sbjct: 365 GSKSFSPNIVTFNTLITGYC-KAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGN 423

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +G   I + M+   + P T T   ++  L   + ++ A+
Sbjct: 424 INGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAL 463



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 125/412 (30%), Positives = 227/412 (55%), Gaps = 20/412 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ LFH M     CK  V +F +++N + +EG    A+   + +V      + PN +
Sbjct: 66  VSEALDLFHQM-----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVED---GLQPNQI 117

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           T+  ++  +C++G   +A+ L R+M  + + +PD+  Y  ++DGL K+ R  +A  L  E
Sbjct: 118 TYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE 177

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           MQ  G FP  VT++ +ING C +G+   A +L+  M ++   P+ VT++ LI+ L  +G+
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE----- 367
           L+ A  LL  M++S   PN VT  T+++GL   G+  D   +  +M++    ++      
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297

Query: 368 ------YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
                   Y+ LISGL  EGK  +A +L+++M  +G  P+TV YS++I+GLC+  + DEA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            ++   M +   + N  T+++L+ G+ ++G     +E++ +M +   V N + Y  LI G
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             + G +  +  ++ +M+S G  PD +   +M+ GL +   ++ AL +  E+
Sbjct: 418 FRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 204/428 (47%), Gaps = 53/428 (12%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +TFN ++  +C    V  A+ LF +M    C+P++ T+ TLM+GLC+E R+ EAV L
Sbjct: 48  PTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 103

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV------------------------ 285
           LD M  DG  P  +T+  +++G+CK G+   A  L+                        
Sbjct: 104 LDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLW 163

Query: 286 --------DNMFL----KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
                    N+F+    KG  P+ VTY+ +I+G C  G   +A  LL  M+  K  P+ V
Sbjct: 164 KDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVV 223

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           T+  +IN LVK G       +L  M       N    +TL+ GL   GK +DA++++K M
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283

Query: 394 MEK-----------GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +            G +P+   Y+ LI GL   GK  EAEE+  EM + G   +  TYSS
Sbjct: 284 QKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSS 343

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G  +  +  +A +++  M   +   N V ++ LI G C+ G + +   ++ +M  RG
Sbjct: 344 MINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRG 403

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
              + + Y ++I G    G++  +L +F EM  +     PD  T   +L  L  +  +  
Sbjct: 404 IVANAITYITLIRGFRKVGNINGSLDIFQEM--ISSGVYPDTITIRNMLTGLWSKEELKR 461

Query: 563 SIDLLNSM 570
           ++ +L  +
Sbjct: 462 ALAMLEEL 469



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 140/293 (47%), Gaps = 12/293 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I  + +SG +   + +L  M   K      +F  +  A  K   +  A  L   M
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI------VNAKHM--NILPNTLTFN 196
           +    C   V + N++L+ +   G    ALE +  +      ++A H    + P+  T+N
Sbjct: 249 ISSGVCPNVV-TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           ++I  +   G    A +L+ EMP R   PD  TY ++++GLCK++RLDEA  + D M   
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P  VTFN LI G CK G +    +L   M  +G + N +TY TLI G    GN++ +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           + +   M++S   P+ +   TI N L  L    +  R L  +EE +  ++ ++
Sbjct: 428 LDIFQEMISSGVYPDTI---TIRNMLTGLWSKEELKRALAMLEELQMSMDHHL 477



 Score = 45.4 bits (106), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 32/151 (21%), Positives = 64/151 (42%), Gaps = 27/151 (17%)

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           D+ +++ +I   C+   +  AL  F ++  L     P + T+N LL+ LC +  +S ++D
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKL--GFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
           L + M    C P++VT    +  L                      +  R      +++ 
Sbjct: 72  LFHQM----CKPNVVTFTTLMNGL---------------------CREGRVVEAVALLDR 106

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           M++  L P   T+  +V  +C+     +A+N
Sbjct: 107 MVEDGLQPNQITYGTIVDGMCKMGDTVSALN 137


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 225/428 (52%), Gaps = 7/428 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL  +N ++   HM+  P+T+ F  ++ ++ ++      + L  +M      PD+YT   
Sbjct: 96  ALSSFNRML---HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C   RL  A  +L ++   GC P   TFN LI GLC  G++G A  L D    +G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ VTY TL++GLC  GN   A+ LL  MV   C PN + Y TII+ L K  +  +  
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M  +    + + Y++LI  L    + +    L  +M+     PN VV+S ++D L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G    A +++  MI  G   +  TY++LM G     +  +AV+++  M    CV N 
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 392

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y++LI+G C+  ++ +A  +  QM  +G   D V Y+++IHGLC+ G ++ A+ LF+E
Sbjct: 393 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 452

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--K 590
           M  +     PD+ TY ILL+ LCK  +++ ++ LL ++     D D++  NI +  +   
Sbjct: 453 M--VASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRA 510

Query: 591 EKLEAPQD 598
            +LEA +D
Sbjct: 511 GELEAARD 518



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 226/442 (51%), Gaps = 8/442 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++A+  F+ M+   H   +   F  +L  I +   Y   L     +       I P+  
Sbjct: 93  LDDALSSFNRML-HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM---DSFGIPPDVY 148

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I + C L  +  A  +  ++    C+PD  T+ TL+ GLC E ++ EA+ L D+ 
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  L+NGLCK G    A +L+ +M  K C PN + YNT+I  LC    +
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 268

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +L   M+     P+  TY ++I+ L  L        +L  M   K   N  ++ST+
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEG    A  +   M+++G +P+ V Y+AL+DG C   + DEA ++   M++ GC
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  +Y+ L+ G+ +  +  KA+ + + M+    + + V Y+ LIHGLC  G+L+ A  
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           ++ +M++ G  PD+V Y  ++  LC    + EA+ L      +E  +   D+  YNI ++
Sbjct: 449 LFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKA---IEGSNLDADILVYNIAID 505

Query: 553 ALCKQSNISHSIDLLNSMMDRG 574
            +C+   +  + DL +++  +G
Sbjct: 506 GMCRAGELEAARDLFSNLSCQG 527



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/357 (26%), Positives = 174/357 (48%), Gaps = 16/357 (4%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A+S  +RM+     P+ V +  ++  + K+        +   M+      + Y  + 
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI+      +   A  +  ++++ GC+P+   ++ LI GLC  GK  EA  +  + I  G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              +  TY +LM G  + G    A+ + + M + NC  N + Y+ +I  LC+D ++ EA 
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++++M+++G  PD+  Y+S+IH LCN    +    L NEM+    K  P+V  ++ +++
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV--NSKIMPNVVVFSTVVD 330

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFL------- 603
           ALCK+  I+ + D+++ M+ RG +PD+VT    +    L+ +++      D +       
Sbjct: 331 ALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP 390

Query: 604 -----NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                N L     + QR      ++E M  + L   T T+  ++  LC   R+Q AI
Sbjct: 391 NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAI 447



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 155/337 (45%), Gaps = 39/337 (11%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EA+ LF   + E   +  V ++ +++N + + G    A+     +V     N  PN +
Sbjct: 198 IGEALHLFDKTIGEGF-QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQK---NCRPNVI 253

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N +I ++C+   V  A  LF EM  +   PDI+TY +L+  LC          LL+EM
Sbjct: 254 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 313

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  V F+ +++ LCK G +  A  +VD M  +G  P+ VTY  L+ G CL+  +
Sbjct: 314 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 373

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+AV + D MV   C+PN  +Y  +ING  ++ R      +L  M  +    +   Y+TL
Sbjct: 374 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 433

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTV------------------------------ 403
           I GL   G+ + A+ L+ +M+  G  P+ V                              
Sbjct: 434 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 493

Query: 404 -----VYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
                VY+  IDG+CR G+ + A ++   +   G AA
Sbjct: 494 DADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFAA 530



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 68/161 (42%), Gaps = 23/161 (14%)

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
           TQM S G  PDV   + +I+  C+   +  A  +  ++L L    QPD  T+N L+  LC
Sbjct: 136 TQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKL--GCQPDNTTFNTLIRGLC 193

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
            +  I  ++ L +  +  G  PD+VT    +  L                      K   
Sbjct: 194 VEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGL---------------------CKVGN 232

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           TS   +++  M+QK   P    +  ++  LC+ +++  A N
Sbjct: 233 TSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 273


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 161/602 (26%), Positives = 273/602 (45%), Gaps = 97/602 (16%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + KAY K  +  EA+ +F TM   F C  T++SFN++LN  ++   + RA  F+ +   A
Sbjct: 83  LLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEAA 142

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   + PN  T+N+++K +C+ G  +    L   M      PD  TY TL+ G+ K   L
Sbjct: 143 R---VSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDL 199

Query: 244 DEAVLLLDEMQ--------------VDG----------------------CFPTPVTFNV 267
             A+ + DEM+              +DG                       FP+ V++NV
Sbjct: 200 GFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNV 259

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           +I+GLCK G      ++ + M       +  TY+ LIHGL   G+L  A  + + MV   
Sbjct: 260 MISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRG 319

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+ VT   ++NGL K G   +   +   M +     N   Y+  + GLF+ GK +DAM
Sbjct: 320 VRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDDAM 378

Query: 388 KLWKQMMEK---------------------------------GCKPNTVVYSALIDGLCR 414
            LW  ++E                                  G   +   YS+LI+ LC+
Sbjct: 379 MLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINALCK 438

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G+ DEA+ ++  M   GC  N+   + L+ GF +  K   AV+++++M+   C    V 
Sbjct: 439 EGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGCSLTVVS 498

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y++LI+GL    + REA     +ML +G KPD++ YS++I GL  +  ++ AL+L+++  
Sbjct: 499 YNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALRLWHQF- 557

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            L+   +PD+  YNI+++ LC    +  ++ L +++  + C  +LVT N  +        
Sbjct: 558 -LDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKC-VNLVTHNTIMEG------ 609

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                           +K        KI   +L+  L P   ++   ++ LC   R+  A
Sbjct: 610 ---------------FYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDA 654

Query: 655 IN 656
           + 
Sbjct: 655 VG 656



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 207/435 (47%), Gaps = 12/435 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++  +I      G F     +  RM++ +R     ++  +     +A  +  A +++  M
Sbjct: 256 SYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEM 315

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V     +  V + N++LN + + G      E +  +        L N  ++N+ +K +  
Sbjct: 316 VGR-GVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCS----LRNVRSYNIFLKGLFE 370

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ--VDGCFPTP 262
            G VD+A+ L+  +     E D  TY  ++ GLC    ++ A+ +L+E +    G     
Sbjct: 371 NGKVDDAMMLWDGL----LEADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDE 426

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             ++ LIN LCK G L  A  +V+ M  +GC  N    N LI G      LD AV +   
Sbjct: 427 FAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFRE 486

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C    V+Y  +INGL++  R  +    +  M E+ +  +   YSTLI GL++   
Sbjct: 487 MSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNM 546

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A++LW Q ++ G KP+ ++Y+ +I  LC  GK ++A ++   +    C  N  T+++
Sbjct: 547 MDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNT 605

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           +M+GF++ G    A +IW  + ++    + + Y++ + GLC  G++ +A       L RG
Sbjct: 606 IMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRG 665

Query: 503 CKPDVVAYSSMIHGL 517
             P  + ++ ++  +
Sbjct: 666 FLPTAITWNILVRAV 680



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/267 (20%), Positives = 120/267 (44%), Gaps = 5/267 (1%)

Query: 77  GSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEE 136
           G   + +  + SLI      G     + V+  M +            +   + K   ++ 
Sbjct: 420 GGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDS 479

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+++F  M  +  C  TV S+N ++N +++   +  A +  N ++        P+ +T++
Sbjct: 480 AVKVFREMSGK-GCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWK---PDIITYS 535

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I  +    ++D A++L+ +      +PDI  Y  ++  LC   ++++A+ L   ++  
Sbjct: 536 TLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQK 595

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            C    VT N ++ G  K G    A+K+  ++      P+ ++YN  + GLC  G +  A
Sbjct: 596 KCV-NLVTHNTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDA 654

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLV 343
           V  LD  +    +P  +T+  ++  ++
Sbjct: 655 VGFLDDALVRGFLPTAITWNILVRAVI 681


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 169/586 (28%), Positives = 269/586 (45%), Gaps = 71/586 (12%)

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM------NIL--- 189
           R+ + M+ E  C  + K FNS+++     G +  A +    +V   HM      NIL   
Sbjct: 317 RVLNMMMME-GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 375

Query: 190 ----PNTLTFNLV-------------------------IKTVCRLGLVDNAIQLFREMPV 220
                ++L F+L+                          + +C  G  + A  + REM  
Sbjct: 376 ICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 435

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +   PD  TY  +++ LC  ++++ A LL +EM+  G      T+ ++++  CK G + +
Sbjct: 436 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 495

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A K  + M   GC PN VTY  LIH       +  A  L + M++  C+PN VTY  +I+
Sbjct: 496 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 555

Query: 341 GLVKLGRAVDGARVLMSM----------------EERKFHVNEYIYSTLISGLFKEGKAE 384
           G  K G+     ++   M                ++     N   Y  L+ G  K  + E
Sbjct: 556 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 615

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A KL   M  +GC+PN +VY ALIDGLC+VGK DEA+E+  EM  +G  A  +TYSSL+
Sbjct: 616 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 675

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             +F+  +   A ++   M +N+C  N V Y+ +I GLC+ GK  EA  +   M  +GC+
Sbjct: 676 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 735

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P+VV Y++MI G    G +E  L+L   M        P+  TY +L++  CK   +  + 
Sbjct: 736 PNVVTYTAMIDGFGMIGKIETCLELLERM--GSKGVAPNYVTYRVLIDHCCKNGALDVAH 793

Query: 565 DLLNSMMDR-------GCDPDLVTCNI-FLTALKEKLEAPQDGT-DFLNE---LAIRLFK 612
           +LL  M          G    +   N  F+ +L    E  QD T  FL+    L   L K
Sbjct: 794 NLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 853

Query: 613 RQRTSGGFKIVE--VMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            QR     +++E        L   +ST+  +++ LC   +++ A  
Sbjct: 854 AQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 899



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 224/494 (45%), Gaps = 53/494 (10%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A  +   M+ +     T  +++ VLN +        A   +  +   K   ++ +  T
Sbjct: 424 EKAFSVIREMIGQGFIPDT-STYSKVLNYLCNASKMELAFLLFEEM---KRGGLVADVYT 479

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           + +++ + C+ GL++ A + F EM    C P++ TY  L+    K  ++  A  L + M 
Sbjct: 480 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 539

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVD-----------NMFLKGC-----LPNEV 298
            +GC P  VT++ LI+G CK G++ +A ++ +           +M+ K        PN V
Sbjct: 540 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 599

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY  L+ G C    +++A  LLD M    C PN++ Y  +I+GL K+G+  +   V   M
Sbjct: 600 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 659

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E  F    Y YS+LI   FK  + + A K+  +M+E  C PN V+Y+ +IDGLC+VGK 
Sbjct: 660 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 719

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           DEA +++  M   GC  N  TY++++ GF   GK    +E+ + M       N V Y VL
Sbjct: 720 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 779

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG---------------------- 516
           I   C++G L  A  +  +M           Y  +I G                      
Sbjct: 780 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAP 839

Query: 517 -----------LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
                      L  A  +E AL+L  E+            TYN L+ +LC  + +  +  
Sbjct: 840 FLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 899

Query: 566 LLNSMMDRGCDPDL 579
           L + M  +G  P++
Sbjct: 900 LFSEMTKKGVIPEM 913



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 261/570 (45%), Gaps = 77/570 (13%)

Query: 157 FNSVLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           F   LNV++++    G +  ALE    +   K     P+  T+N +I+   +   +D+A 
Sbjct: 158 FGQFLNVLVRKHCRNGSFSIALE---ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS 214

Query: 213 QLFREMPVRN---------------CE-----------------PDIYTYCTLMDGLCKE 240
            + REM + N               C+                 PD   Y  L+ GLC+ 
Sbjct: 215 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEA 274

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +  +EA+  L+ M+   C P  VT++ L+ G     +LGR  ++++ M ++GC P+   +
Sbjct: 275 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 334

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+L+H  C  G+   A  LL +MV    MP  V Y  +I  +     +++    L+ + E
Sbjct: 335 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFD--LLDLAE 392

Query: 361 RKFH--------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           + +         +N+   S+    L   GK E A  + ++M+ +G  P+T  YS +++ L
Sbjct: 393 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 452

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   K + A  +  EM   G  A+ +TY+ ++  F ++G   +A + + +M +  C  N 
Sbjct: 453 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 512

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LIH   +  K+  A  ++  MLS GC P++V YS++I G C AG VE+A ++F  
Sbjct: 513 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 572

Query: 533 MLCL--------------EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           M                 +   +P+V TY  LL+  CK   +  +  LL++M   GC+P+
Sbjct: 573 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 632

Query: 579 LVTCNIFLTALKE--KLEAPQDGTDFLNE------------LAIRLFKRQRTSGGFKIVE 624
            +  +  +  L +  KL+  Q+    ++E            L  R FK +R     K++ 
Sbjct: 633 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 692

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            ML+   +P    +  ++  LC+  +   A
Sbjct: 693 KMLENSCAPNVVIYTEMIDGLCKVGKTDEA 722



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 231/560 (41%), Gaps = 111/560 (19%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N +P+T+ +  +I  +C   L + A+     M   +C P++ TY TL+ G   + +L   
Sbjct: 256 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 315

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             +L+ M ++GC+P+P  FN L++  C +G+   A KL+  M   G +P  V YN LI  
Sbjct: 316 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 375

Query: 307 -----------------------------------------LCLKGNLDKAVSLLDRMVA 325
                                                    LC  G  +KA S++  M+ 
Sbjct: 376 ICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 435

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
              +P+  TY  ++N L    +      +   M+      + Y Y+ ++    K G  E 
Sbjct: 436 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 495

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A K + +M E GC PN V Y+ALI    +  K   A E+   M++ GC  N  TYS+L+ 
Sbjct: 496 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 555

Query: 446 GFFESGKGHKAVEIWKDMAKNNCV----------------YNEVCYSVLIHGLCEDGKLR 489
           G  ++G+  KA +I++ M  +  V                 N V Y  L+ G C+  ++ 
Sbjct: 556 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 615

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--------------- 534
           EAR +   M   GC+P+ + Y ++I GLC  G ++EA ++  EM                
Sbjct: 616 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 675

Query: 535 ------------------CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
                              LE    P+V  Y  +++ LCK      +  L+  M ++GC 
Sbjct: 676 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 735

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           P++VT    +           DG   + ++   L          +++E M  K ++P   
Sbjct: 736 PNVVTYTAMI-----------DGFGMIGKIETCL----------ELLERMGSKGVAPNYV 774

Query: 637 TWERVVQELCRPKRIQAAIN 656
           T+  ++   C+   +  A N
Sbjct: 775 TYRVLIDHCCKNGALDVAHN 794



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 254/512 (49%), Gaps = 27/512 (5%)

Query: 76  LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYR-MRREKRVVLEKSFIFIFKAYGKAHLV 134
           +G   + D++ YS + +Y  +     L  +L+  M+R   V    ++  +  ++ KA L+
Sbjct: 434 IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLI 493

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A + F+ M  E  C   V ++ ++++  ++      A E +  +++      LPN +T
Sbjct: 494 EQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE---GCLPNIVT 549

Query: 195 FNLVIKTVCRLGLVDNAIQLFREM----PVRNCE------------PDIYTYCTLMDGLC 238
           ++ +I   C+ G V+ A Q+F  M     V + +            P++ TY  L+DG C
Sbjct: 550 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 609

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K +R++EA  LLD M ++GC P  + ++ LI+GLCK G+L  A ++   M   G      
Sbjct: 610 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 669

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY++LI         D A  +L +M+ + C PN V Y  +I+GL K+G+  +  +++  M
Sbjct: 670 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 729

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           EE+    N   Y+ +I G    GK E  ++L ++M  KG  PN V Y  LID  C+ G  
Sbjct: 730 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 789

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D A  +L EM       +   Y  +++GF  + +  +++ +  ++ +++       Y +L
Sbjct: 790 DVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLL 847

Query: 479 IHGLCEDGKLREARMVWTQM--LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           I  L +  +L  A  +  ++   S         Y+S+I  LC A  VE A +LF+EM   
Sbjct: 848 IDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM--T 905

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +    P++ ++  L+  L + S IS ++ LL+
Sbjct: 906 KKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 937



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 240/519 (46%), Gaps = 37/519 (7%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K T   +N+++++I+++       EF   I +     +    L  N++++  CR G    
Sbjct: 121 KHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDK-EVFGQFL--NVLVRKHCRNGSFSI 177

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A++    +      P   TY  L+    K +RLD A L+  EM +        T      
Sbjct: 178 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 237

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            LCK G+   A  LV+    +  +P+ V Y  LI GLC     ++A+  L+RM A+ C+P
Sbjct: 238 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294

Query: 331 NEVTYGTIINGLV---KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           N VTY T++ G +   +LGR     RVL  M     + +  I+++L+      G    A 
Sbjct: 295 NVVTYSTLLCGCLNKKQLGRC---KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 351

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE--------AEEILFEMINNGCAANAFT 439
           KL K+M++ G  P  VVY+ LI  +C  G  D         AE+   EM+  G   N   
Sbjct: 352 KLLKKMVKCGHMPGYVVYNILIGSIC--GDKDSLNFDLLDLAEKAYSEMLAAGVVLNKIN 409

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
            SS  +    +GK  KA  + ++M     + +   YS +++ LC   K+  A +++ +M 
Sbjct: 410 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 469

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G   DV  Y+ M+   C AG +E+A K FNEM   E    P+V TY  L++A  K   
Sbjct: 470 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKK 527

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +S++ +L  +M+  GC P++VT +  +       +A Q       E A ++F+R   S  
Sbjct: 528 VSYANELFETMLSEGCLPNIVTYSALIDG---HCKAGQ------VEKACQIFERMCGSKD 578

Query: 620 FKIVEVMLQKFLS----PQTSTWERVVQELCRPKRIQAA 654
              V++  +++      P   T+  ++   C+  R++ A
Sbjct: 579 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 617


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 141/496 (28%), Positives = 250/496 (50%), Gaps = 10/496 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK--SFIFIFKAYGKAHLVEEAIRLFH 142
           T   ++  Y  + +F   + V+  M  EKR V     +   +  A  +A  V+ AI L  
Sbjct: 159 TLNIMVHSYCKTLEFDGADTVISEM--EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVD 216

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +M +    K  + ++NSVL  + +   + +A E +  +      ++ P+  +FN++I   
Sbjct: 217 SMANR-GLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM---DQCSVAPDVRSFNILIGGF 272

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CR+G V  A++ ++EM  R   PD+ ++  L+    +   +D A   L EM+  G  P  
Sbjct: 273 CRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDG 332

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V + ++I G C+ G +  A ++ D M   GCLP+ VTYNTL++GLC +  L  A  LL+ 
Sbjct: 333 VIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNE 392

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M      P+  T+ T+I+G  + G   +  ++  ++  ++   +   Y++LI G+ ++G 
Sbjct: 393 MEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGD 452

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A +LW  M  +   PN + YS LID  C  G+ ++A   L EM+  G   N  TY+S
Sbjct: 453 LAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNS 512

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++KG+  SG   K  +  + M ++N   + + ++ LIHG  ++  +  A  V+  M    
Sbjct: 513 IIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEM 572

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            +PD V Y+ +I+G    G++++A ++F  M   +   +PD +TY  L+N      N   
Sbjct: 573 VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMG--DSGIEPDRYTYMSLINGHVTAGNSKQ 630

Query: 563 SIDLLNSMMDRGCDPD 578
           +  L + M+ RG  PD
Sbjct: 631 AFQLHDEMIHRGFAPD 646



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 147/517 (28%), Positives = 242/517 (46%), Gaps = 54/517 (10%)

Query: 107 YRMRREKRVVLEKS----FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN 162
           +R+  + RV +  S     + +    G  HL +EA RL  +   E +           LN
Sbjct: 110 FRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNA--------YTLN 161

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMN---ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +++    Y + LEF         M    + P+ +T N++I    R G VD AI L   M 
Sbjct: 162 IMVHS--YCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMA 219

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
            R  +P I TY +++ GLCK  R D+A  +   M      P   +FN+LI G C+ GE+ 
Sbjct: 220 NRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVK 279

Query: 280 RAAKLVDNM------------------------------FLK-----GCLPNEVTYNTLI 304
            A K    M                              +L+     G +P+ V Y  +I
Sbjct: 280 EAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            G C  G++ +A+ + D MV   C+P+ VTY T++NGL K  R +D  ++L  MEER   
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   ++TLI G  ++G  E+A++L+  ++ +  +P+ V Y++LIDG+CR G   +A E+
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             +M       N  TYS L+    E G+   A     +M K   + N   Y+ +I G C 
Sbjct: 460 WDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCR 519

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G +++ +    +M      PD++ ++++IHG     ++  A  +FN M   +   +PD 
Sbjct: 520 SGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIM--EKEMVRPDA 577

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            TYN+++N   +Q N+  +  +   M D G +PD  T
Sbjct: 578 VTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYT 614



 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 131/534 (24%), Positives = 241/534 (45%), Gaps = 27/534 (5%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  + + Y ++    EA   F  ++D         + N++L V+ + G  H A E Y  +
Sbjct: 90  FDLLIRTYTQSRKPREAFEAFRLLLDH-RVPVPASASNALLAVLSRAGWPHLAQEAYRLV 148

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           +++   +   N  T N+++ + C+    D A  +  EM  R   PD+ T+  L+D   + 
Sbjct: 149 LSS---DSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRA 205

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             +D A+ L+D M   G  P  VT+N ++ GLCK+    +A ++   M      P+  ++
Sbjct: 206 GDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSF 265

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N LI G C  G + +AV     M      P+ V++  +I    + G        L  M+ 
Sbjct: 266 NILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKG 325

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                +  IY+ +I G  + G   +A+++  +M+  GC P+ V Y+ L++GLC+  +  +
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLD 385

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           AE++L EM   G   +  T+++L+ G+   G    A++++  + +     + V Y+ LI 
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLID 445

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G+C  G L +A  +W  M +R   P+ + YS +I   C  G VE+A    +EM  ++  +
Sbjct: 446 GMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEM--VKKGN 503

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P++ TYN ++   C+  N+      L  M      PDL+T N  +              
Sbjct: 504 LPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHG------------ 551

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      K +   G F +  +M ++ + P   T+  ++        +Q A
Sbjct: 552 ---------YIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDA 596



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 16/254 (6%)

Query: 85  TFYSLIQHYANSGDFK-SLEM--VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF +LI  Y   G+F+ +L++   L R R    VV   S I      G      E     
Sbjct: 404 TFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE----- 458

Query: 142 HTMVDEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
             + D+ H +  +    +++ +++   ++G    A  F + +V   +   LPN  T+N +
Sbjct: 459 --LWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGN---LPNIRTYNSI 513

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           IK  CR G V    Q  ++M   N  PD+ T+ TL+ G  KE  +  A  + + M+ +  
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  VT+N++ING  + G +  A ++   M   G  P+  TY +LI+G    GN  +A  
Sbjct: 574 RPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQ 633

Query: 319 LLDRMVASKCMPNE 332
           L D M+     P++
Sbjct: 634 LHDEMIHRGFAPDD 647



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/394 (20%), Positives = 160/394 (40%), Gaps = 50/394 (12%)

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           ++  ++AS   P    +  +I    +  +  +       + + +  V     + L++ L 
Sbjct: 74  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLS 133

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           + G    A + ++ ++    + N    + ++   C+  + D A+ ++ EM       +  
Sbjct: 134 RAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVV 193

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ L+   F +G    A+ +   MA        V Y+ ++ GLC+  +  +A+ V+  M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTM 253

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML------------CL---------- 536
                 PDV +++ +I G C  G V+EA+K + EM             CL          
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEM 313

Query: 537 --------EPKS---QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
                   E K     PD   Y +++   C+  ++S ++ + + M+  GC PD+VT N  
Sbjct: 314 DHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTL 373

Query: 586 LTALKEKLEAPQDGTDFLNELA--------------IRLFKRQRT-SGGFKIVEVMLQKF 630
           L  L  K     D    LNE+               I  + RQ       ++ + +L++ 
Sbjct: 374 LNGLC-KQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR 432

Query: 631 LSPQTSTWERVVQELCRPKRIQAAINKCWSNLYG 664
           L P   T+  ++  +CR   +  A N+ W +++ 
Sbjct: 433 LRPDVVTYNSLIDGMCRKGDLAKA-NELWDDMHA 465



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/235 (20%), Positives = 98/235 (41%), Gaps = 27/235 (11%)

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           EI+  ++ +        +  L++ + +S K  +A E ++ +  +         + L+  L
Sbjct: 73  EIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVL 132

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCLEPKS 540
              G    A+  +  +LS   + +    + M+H  C     + A  + +EM   C+    
Sbjct: 133 SRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCV---- 188

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            PDV T+N+L++A  +  ++  +I L++SM +RG  P +VT N  L              
Sbjct: 189 FPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKG------------ 236

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                    L K +R     ++   M Q  ++P   ++  ++   CR   ++ A+
Sbjct: 237 ---------LCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAV 282


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 131/408 (32%), Positives = 231/408 (56%), Gaps = 5/408 (1%)

Query: 167 EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
           +G   ++L F++ +V A+   +  N +++  ++  +C++G    AI+L R +  R+  PD
Sbjct: 215 KGEVKKSLHFHDKVV-AQGFQM--NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPD 271

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
           +  Y T++DGLCK+  ++EA     EM   G FP  +T++ LI G C  G+L  A  L++
Sbjct: 272 VVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLN 331

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M LK   P+  TY  LI  LC +G L +A +LL  M      PN VTY T+++G   +G
Sbjct: 332 EMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVG 391

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
              +  ++  +M + + + +   Y+ +I+GL K    ++AM L ++M+ K   PNTV Y+
Sbjct: 392 EVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYN 451

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           +LIDGLC+ G+   A +++ E+ + G  A+  TY+SL+ G  ++    KA+ ++  M + 
Sbjct: 452 SLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKER 511

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               N+  Y+ LI GLC+  +L+ A+ ++  +L +GC  DV  Y+ MI GLC  G ++EA
Sbjct: 512 GIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEA 571

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           L + ++M   +    PD  T+ I++ +L ++     +  LL+ M+ +G
Sbjct: 572 LAMKSKM--EDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 223/448 (49%), Gaps = 23/448 (5%)

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
           +V +A+  F  M +    P I  +  ++  L K      A+ L  +M+V G  P  VT +
Sbjct: 112 VVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLS 171

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +LIN  C  G++  +  ++  +   G  PN +   TL+ GLCLKG + K++   D++VA 
Sbjct: 172 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQ 231

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
               N+V+YGT++NGL K+G      ++L  +E+R    +  +Y+T+I GL K+    +A
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
              + +M  +G  P+ + YS LI G C  G+   A  +L EM       + +TY+ L+  
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             + GK  +A  +   M K     N V YS L+ G C  G++  A+ ++  M+     P 
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           V +Y+ MI+GLC   SV+EA+ L  EM  L     P+  TYN L++ LCK   I+ ++DL
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREM--LHKNVVPNTVTYNSLIDGLCKSGRITSALDL 469

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           +  +  RG   D++T     T+L + L   Q+      + AI LF + +  G        
Sbjct: 470 MKELHHRGQPADVIT----YTSLLDGLCKNQN-----LDKAIALFMKMKERG-------- 512

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
               + P   T+  ++  LC+  R++ A
Sbjct: 513 ----IQPNKYTYTALIDGLCKGARLKNA 536



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 241/497 (48%), Gaps = 48/497 (9%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM---NILPNTLTFN 196
           + H  V +F+    +++  S++      G   +   F   I  +K M    I P+ +T +
Sbjct: 112 VVHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLS 171

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           ++I   C LG +  +  +  ++     +P+     TLM GLC +  + +++   D++   
Sbjct: 172 ILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQ 231

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G     V++  L+NGLCK GE   A KL+  +  +   P+ V YNT+I GLC    +++A
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEA 291

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
                 M +    P+ +TY T+I G    G+ +    +L  M  +  + + Y Y+ LI  
Sbjct: 292 YDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDA 351

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK------------------- 417
           L KEGK ++A  L   M ++G KPN V YS L+DG C VG+                   
Sbjct: 352 LCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPS 411

Query: 418 ----------------PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
                            DEA  +L EM++     N  TY+SL+ G  +SG+   A+++ K
Sbjct: 412 VCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMK 471

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           ++       + + Y+ L+ GLC++  L +A  ++ +M  RG +P+   Y+++I GLC   
Sbjct: 472 ELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGA 531

Query: 522 SVEEALKLFNEML----CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
            ++ A KLF  +L    C+      DV+TYN+++  LCK+  +  ++ + + M D GC P
Sbjct: 532 RLKNAQKLFQHILVKGCCI------DVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIP 585

Query: 578 DLVTCNIFLTALKEKLE 594
           D VT  I + +L EK E
Sbjct: 586 DAVTFEIIIRSLFEKDE 602



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 173/355 (48%), Gaps = 16/355 (4%)

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           AVS  + M+  +  P+ + +G I+  LVK+        +   ME +    +    S LI+
Sbjct: 116 AVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILIN 175

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
                G+   +  +  ++++ G +PNT++ + L+ GLC  G+  ++     +++  G   
Sbjct: 176 CFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQM 235

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  +Y +L+ G  + G+   A+++ + +   +   + V Y+ +I GLC+D  + EA   +
Sbjct: 236 NQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFY 295

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
           T+M SRG  PDV+ YS++I G C AG +  A  L NEM        PDV+TY IL++ALC
Sbjct: 296 TEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTL--KNINPDVYTYTILIDALC 353

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA---LKEKLEAPQDGTDFL--------- 603
           K+  +  + +LL  M   G  P++VT +  +     + E   A Q     +         
Sbjct: 354 KEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVC 413

Query: 604 --NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             N +   L K +       ++  ML K + P T T+  ++  LC+  RI +A++
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALD 468



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 114/242 (47%), Gaps = 33/242 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  Y   G+  + + + + M + +      S+  +     K   V+EA+ L   M
Sbjct: 379 TYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREM 438

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEG-----------LYHRA----LEFYNHIVNA------ 183
           + +     TV ++NS+++ + + G           L+HR     +  Y  +++       
Sbjct: 439 LHKNVVPNTV-TYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQN 497

Query: 184 -----------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
                      K   I PN  T+  +I  +C+   + NA +LF+ + V+ C  D+YTY  
Sbjct: 498 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNV 557

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           ++ GLCKE  LDEA+ +  +M+ +GC P  VTF ++I  L +  E  +A KL+  M  KG
Sbjct: 558 MIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 617

Query: 293 CL 294
            L
Sbjct: 618 LL 619


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/474 (31%), Positives = 252/474 (53%), Gaps = 32/474 (6%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M + P+T T+N V+K +C     + A +L REM   +C P+  T+ T +   C+   LD 
Sbjct: 1   MPVAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDR 60

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           AV LL++M   GC P  + ++ L+NG  ++G +  A KL++ M    C PN V YN  + 
Sbjct: 61  AVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALK 117

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFH 364
           GLC+ G  ++   L+  MV   C PN+ T+ T+IN L +  R V+ A  VL  M++  + 
Sbjct: 118 GLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQ-NRLVEYAVEVLEQMQKYGYM 176

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y+T+IS    + +A+DA+KL K M+   CKP+T+ ++A++  LC+  +  +A E+
Sbjct: 177 PDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVEL 233

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           + +M+   C  N  T++ L+    ++G+   A+E+++ M K  C+ + V YS LI+G  E
Sbjct: 234 VAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSE 293

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQ 541
            G L E  M +    S  C+ D+ +Y++ + GLC A   ++A +L  +M+   CL     
Sbjct: 294 QG-LDE--MAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCL----- 345

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           P+  T+NIL+++LC++  ++ +ID+   M   G  PD+ T N  +    E+     D   
Sbjct: 346 PNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRL-DDALK 404

Query: 602 FL------------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           FL            N +   L + +R     K+V  ML+K  +P   T++   Q
Sbjct: 405 FLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQ 458



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 232/451 (51%), Gaps = 31/451 (6%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           MPV    PD YTY T++ GLC   + ++A  L+ EM  + C P  VTF   I   C+NG 
Sbjct: 1   MPV---APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGL 57

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           L RA +L++ M   GC P+ + Y+TL++G    G +D+A+ LL+ M+   C PN V Y  
Sbjct: 58  LDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNA 114

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
            + GL   GR  +   ++  M  +    N+  +STLI+ L +    E A+++ +QM + G
Sbjct: 115 ALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYG 174

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P+ V Y+ +I       + D+A ++L  M+   C  +  ++++++K   ++ + + AV
Sbjct: 175 YMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAV 231

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E+   M K +C  NE+ +++LI  LC++G++++A  V+  M    C PD+V YSS+I+G 
Sbjct: 232 ELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGF 291

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
              G  E A  LF  M C     + D+F+YN  L  LC  +    + +L+  M+   C P
Sbjct: 292 SEQGLDEMAFDLFRSMPC-----RADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLP 346

Query: 578 DLVTCNIFLTALKEK----------LEAPQDGTD---FLNELAIRLFKRQ-RTSGGFKIV 623
           + VT NI +++L +K           + P+ G     F     I  +  Q R     K +
Sbjct: 347 NEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFL 406

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M      P T ++  +++ LCR +R + A
Sbjct: 407 STMP---CEPDTISYNSILKGLCRAERWKDA 434



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 179/348 (51%), Gaps = 19/348 (5%)

Query: 96  SGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK 155
           +G ++ +  ++  M R+     + +F  +  +  +  LVE A+ +   M  ++     V 
Sbjct: 122 AGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQM-QKYGYMPDVV 180

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+N++++    +     AL+        K M   P+T++FN V+K +C+     +A++L 
Sbjct: 181 SYNTIISCFSDQARADDALKLL------KSMLCKPDTISFNAVLKCLCKAKRWYDAVELV 234

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M  ++C  +  T+  L+D LC+  ++ +A+ + + M    C P  VT++ LING  + 
Sbjct: 235 AKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQ 294

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G    A  L  +M    C  +  +YN  + GLC+    D A  L+  MV   C+PNEVT+
Sbjct: 295 GLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTF 351

Query: 336 GTIINGLVKLG---RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             +I+ L + G   RA+D   V   M +     + + Y+ LI+G  ++G+ +DA+K    
Sbjct: 352 NILISSLCQKGLVNRAID---VYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLST 408

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           M    C+P+T+ Y++++ GLCR  +  +AE+++ EM+   C  N  T+
Sbjct: 409 M---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 118/236 (50%), Gaps = 22/236 (9%)

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A + +TY++++KG   + +  +A E+ ++M +N+C  NEV ++  I   C++G L  A  
Sbjct: 4   APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  QM   GC PDV+ YS++++G    G V+EALKL N MLC     +P+   YN  L  
Sbjct: 64  LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLC-----RPNTVCYNAALKG 118

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQDGTDFLN 604
           LC         +L+  M+ + C P+  T +  + +L          E LE  Q      +
Sbjct: 119 LCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPD 178

Query: 605 ELA----IRLFKRQ-RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            ++    I  F  Q R     K+++ ML K   P T ++  V++ LC+ KR   A+
Sbjct: 179 VVSYNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAV 231


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/436 (34%), Positives = 230/436 (52%), Gaps = 24/436 (5%)

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
           ++  K +V S N +L+ +++E  +      Y  ++  K   I PN +TFN VI  +C++G
Sbjct: 188 DYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRK---ISPNLITFNTVINGLCKVG 244

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE---AVLLLDEMQVDGCFPTPV 263
            ++ A  +  +M V    P++ TY TL+DG CK  R+ +   A  +L EM  +   P  V
Sbjct: 245 KLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSV 304

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           TFNVLI+G CK+  L  A K+ + M  +G  P  VTYN+L++GLC +G L++A  LLD M
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           ++S   PN +TY  +ING  K     +   +  ++ ++    N   ++TL+ G  K GK 
Sbjct: 365 LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKM 424

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E+A  L K M+EKG  PN   Y+ LI G CR GK +E + +L EM   G  A+  TY+ L
Sbjct: 425 EEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNIL 484

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +  + E  +  KA  +  +M       + + Y++L++G C +G LR A  +  QM   G 
Sbjct: 485 ISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
             +VV Y+ +I G C  G +E+A  L NEM  LE    P+  TY I              
Sbjct: 545 WANVVTYNVLIQGYCRKGKLEDANGLLNEM--LEKGLIPNRTTYEI-------------- 588

Query: 564 IDLLNSMMDRGCDPDL 579
             +   MM++G  PD+
Sbjct: 589 --IKEEMMEKGFLPDI 602



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/383 (31%), Positives = 207/383 (54%), Gaps = 7/383 (1%)

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +++EM  R   P++ T+ T+++GLCK  +L++A  ++D+M+V G +P  VT+N LI+G C
Sbjct: 217 VYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYC 276

Query: 274 KNGELGR---AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           K G +G+   A  ++  M      PN VT+N LI G C   NL  A+ + + M +    P
Sbjct: 277 KMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKP 336

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
             VTY +++NGL   G+  +   +L  M       N   Y+ LI+G  K+   E+A +L+
Sbjct: 337 TVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELF 396

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             + ++G  PN + ++ L+ G C+ GK +EA  +   M+  G   NA TY+ L+ GF   
Sbjct: 397 DNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCRE 456

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           GK  +   +  +M       + V Y++LI   CE  + ++A  +  +ML +G KP  + Y
Sbjct: 457 GKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTY 516

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNISHSIDLLNS 569
           + +++G C  G++  AL L  +M   E + +  +V TYN+L+   C++  +  +  LLN 
Sbjct: 517 NILLNGYCMEGNLRAALNLRKQM---EKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNE 573

Query: 570 MMDRGCDPDLVTCNIFLTALKEK 592
           M+++G  P+  T  I    + EK
Sbjct: 574 MLEKGLIPNRTTYEIIKEEMMEK 596



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 209/397 (52%), Gaps = 19/397 (4%)

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N L++ L K  E G    +   M  +   PN +T+NT+I+GLC  G L+KA  ++D M  
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258

Query: 326 SKCMPNEVTYGTIINGLVKLGRA---VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
               PN VTY T+I+G  K+GR         +L  M E K   N   ++ LI G  K+  
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDEN 318

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A+K++++M  +G KP  V Y++L++GLC  GK +EA+ +L EM+++    N  TY++
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G+ +     +A E++ ++ K     N + ++ L+HG C+ GK+ EA ++   ML +G
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKG 438

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P+   Y+ +I G C  G +EE   L NEM C   K+  D  TYNIL++A C++     
Sbjct: 439 FLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKA--DTVTYNILISAWCEKKEPKK 496

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDFL--NELAI 608
           +  L++ M+D+G  P  +T NI L              L++++E      + +  N L  
Sbjct: 497 AARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQ 556

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
              ++ +      ++  ML+K L P  +T+E + +E+
Sbjct: 557 GYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEM 593



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 173/359 (48%), Gaps = 26/359 (7%)

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N L+  L  +        +   M+  K  PN +T+ T+INGL K+G+      V+  M+ 
Sbjct: 199 NPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKV 258

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMK---LWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
             F  N   Y+TLI G  K G+     K   + K+M+E    PN+V ++ LIDG C+   
Sbjct: 259 WGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDEN 318

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
              A ++  EM + G      TY+SL+ G    GK ++A  +  +M  +N   N + Y+ 
Sbjct: 319 LSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNA 378

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI+G C+   L EAR ++  +  +G  P+V+ +++++HG C  G +EEA  L  + + LE
Sbjct: 379 LINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLL--QKVMLE 436

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               P+  TYN L+   C++  +    +LLN M  RG   D VT NI ++A  EK E P+
Sbjct: 437 KGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKE-PK 495

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                ++E                    ML K L P   T+  ++   C    ++AA+N
Sbjct: 496 KAARLIDE--------------------MLDKGLKPSHLTYNILLNGYCMEGNLRAALN 534



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 180/354 (50%), Gaps = 29/354 (8%)

Query: 309 LKGNLDKAVSLLDR---MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           +KG  + ++SL+     + + +   N +    ++   V+  + V G        + ++ +
Sbjct: 134 VKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKL 193

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +    + L+S L KE +      ++K+M+ +   PN + ++ +I+GLC+VGK ++A +++
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 426 FEMINNGCAANAFTYSSLMKGFFE---SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +M   G   N  TY++L+ G+ +    GK +KA  I K+M +N    N V ++VLI G 
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C+D  L  A  V+ +M S+G KP VV Y+S+++GLCN G + EA  L +EM  L    +P
Sbjct: 314 CKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM--LSSNLKP 371

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           +V TYN L+N  CK+  +  + +L +++  +G  P+++T N  L                
Sbjct: 372 NVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHG-------------- 417

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                    K  +    F + +VML+K   P  ST+  ++   CR  +++   N
Sbjct: 418 -------YCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKN 464



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 166/345 (48%), Gaps = 7/345 (2%)

Query: 85  TFYSLIQHYANSGDFKSL---EMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI  Y   G    +   + +L  M   K      +F  +   + K   +  A+++F
Sbjct: 267 TYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVF 326

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  +   K TV ++NS++N +  EG  + A    + ++++   N+ PN +T+N +I  
Sbjct: 327 EEMQSQ-GLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSS---NLKPNVITYNALING 382

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+  L++ A +LF  +  +   P++ T+ TL+ G CK  +++EA LL   M   G  P 
Sbjct: 383 YCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPN 442

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             T+N LI G C+ G++     L++ M  +G   + VTYN LI   C K    KA  L+D
Sbjct: 443 ASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLID 502

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M+     P+ +TY  ++NG    G       +   ME+     N   Y+ LI G  ++G
Sbjct: 503 EMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKG 562

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
           K EDA  L  +M+EKG  PN   Y  + + +   G   + E  L+
Sbjct: 563 KLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPDIEGHLY 607


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 246/509 (48%), Gaps = 63/509 (12%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
           H  + P     NLV++ +      D+   ++ EM     EP I TY TL+D   +E R+D
Sbjct: 189 HHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVD 248

Query: 245 EAVLLLDEMQV--DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           +A  LL EM+    GC P+ VT+NV+INGL + GEL +AA+LVD M +     +  T+N 
Sbjct: 249 QAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFTFNP 307

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSMEER 361
           LI G   +G+++KA +L   M     +P  VTY TII+G+ + G  V+ AR+  + M   
Sbjct: 308 LITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGN-VEAARMKFVEMRAM 366

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               +   Y++LI+G  K G  ++A+ L+  +   G  P+ + Y+ L+DG CR+G  +EA
Sbjct: 367 GLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEA 426

Query: 422 EEILFEMINNGCAANAFTYSSLMKG------------FFES------------------- 450
                EM+  GC  +  TY+ LM G            FF+                    
Sbjct: 427 RRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISA 486

Query: 451 ----GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
               G   +A ++ + M       + V Y++ + GLC+ G L++A ++W +M+S G +PD
Sbjct: 487 ELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPD 546

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            + Y+ +IH  C  G + EA  +F+ ML       P   TY + ++A C++ N+  +   
Sbjct: 547 CITYTCLIHAHCERGRLREARDIFDGMLV--SGLPPSAVTYTVFIHAYCRRGNLYSAYGW 604

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
              M++ G  P+ VT N+ + A                     L +  RT+  ++    M
Sbjct: 605 FQKMLEEGVRPNEVTYNVLIHA---------------------LCRMGRTNLAYQHFHEM 643

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           L++ LSP   T+  ++   C+    + AI
Sbjct: 644 LERGLSPNKYTYTLLIDGNCKEGNWEEAI 672



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 236/495 (47%), Gaps = 10/495 (2%)

Query: 98  DFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM-VDEFHCKRTVKS 156
           D +S+   + ++  E  +V   + +  F   G+   V++A +L   M      C  +  +
Sbjct: 214 DMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGR---VDQAAKLLREMEARPGGCLPSDVT 270

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N V+N + ++G   +A +    +V+   M+   +  TFN +I      G V+ A  L  
Sbjct: 271 YNVVINGLARKGELEKAAQ----LVDRMRMSKKASAFTFNPLITGYFARGSVEKAGALQL 326

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM      P + TY T++ G+ +   ++ A +   EM+  G  P  +T+N LING CK G
Sbjct: 327 EMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAG 386

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L  A  L  ++   G  P+ +TYN L+ G C  G+L++A      MV   C P+  TY 
Sbjct: 387 NLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYT 446

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++NG  K+            M  +    + + Y+T IS     G   +A +L + M+ +
Sbjct: 447 ILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISR 506

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G   +TV Y+  +DGLC+ G   +A  +  +M+++G   +  TY+ L+    E G+  +A
Sbjct: 507 GISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREA 566

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            +I+  M  +    + V Y+V IH  C  G L  A   + +ML  G +P+ V Y+ +IH 
Sbjct: 567 RDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHA 626

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC  G    A + F+EML  E    P+ +TY +L++  CK+ N   +I L + M   G  
Sbjct: 627 LCRMGRTNLAYQHFHEML--ERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIH 684

Query: 577 PDLVTCNIFLTALKE 591
           PD  T N       E
Sbjct: 685 PDHCTHNALFKGFDE 699



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 206/421 (48%), Gaps = 6/421 (1%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K +  +FN ++      G   +A      + N     I+P  +T+N +I  + R G V+ 
Sbjct: 299 KASAFTFNPLITGYFARGSVEKAGALQLEMENE---GIVPTVVTYNTIIHGMFRSGNVEA 355

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A   F EM      PD+ TY +L++G CK   L EA+ L  +++  G  P+ +T+N+L++
Sbjct: 356 ARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLD 415

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           G C+ G+L  A +    M  +GC P+  TY  L++G     NL       D M++    P
Sbjct: 416 GYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQP 475

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           +   Y T I+  + LG   +  ++   M  R    +   Y+  + GL K G  +DA  LW
Sbjct: 476 DCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLW 535

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            +M+  G +P+ + Y+ LI   C  G+  EA +I   M+ +G   +A TY+  +  +   
Sbjct: 536 MKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRR 595

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G  + A   ++ M +     NEV Y+VLIH LC  G+   A   + +ML RG  P+   Y
Sbjct: 596 GNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTY 655

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + +I G C  G+ EEA++L++EM   +    PD  T+N L      +    H+I  + ++
Sbjct: 656 TLLIDGNCKEGNWEEAIRLYSEM--HQHGIHPDHCTHNALFKGF-DEGQSKHAIQYMENV 712

Query: 571 M 571
           +
Sbjct: 713 V 713


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/413 (32%), Positives = 219/413 (53%), Gaps = 5/413 (1%)

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           N +   K   I P  +TF  +I+ +C L   D A+Q+F +M     +PD + Y  ++  L
Sbjct: 73  NLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHL 132

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CK N+LD A    + M   GC P  VT+ VL++ L K  +  +  ++ + M  KG  P  
Sbjct: 133 CKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPEL 192

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           VTY T+++G C  G +D+A+SL+ R+  +   P+   Y T+I+GL K  R  D AR L  
Sbjct: 193 VTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRH-DEARELFE 251

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M       +  +Y++ ISGL K GK ++A  +  +M+E GC P+ V Y+ +I  LC+  +
Sbjct: 252 MAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNR 310

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN-NCVYNEVCYS 476
             EA+E++ + +   C       + L+ G  +S +  +A  I + M +  +   + V YS
Sbjct: 311 VSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYS 370

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            +I GLC+  +L +A +V  +M   GC PDVV Y+++I   C  G ++EA +LF  M   
Sbjct: 371 AVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRM--H 428

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           E     DV  YNIL+   C+ + +  +I ++  M  RG  P++V+ +  +  L
Sbjct: 429 ERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGL 481



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 236/478 (49%), Gaps = 17/478 (3%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT T N +++     G    A ++F++  V    PD +TY TL+ G CK  ++ +AV LL
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+  G  PT VTF  LI  LC+     +A ++   M      P+   Y  +I  LC  
Sbjct: 76  GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             LD A S  +RMV S C+P++VTY  +++ L K  +   G ++   M  +        Y
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 195

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +T+++G  K G+ + A+ L +++   G  P+  +YS LIDGLC+  + DEA E LFEM  
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARE-LFEM-A 253

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   +   Y+S + G  ++GK  +A  +   M +  C  + V Y+V+I+ LC+D ++ E
Sbjct: 254 AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A+ +  Q + R C P V   + ++ GLC +  VEEA  +   ML    ++ P V TY+ +
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRA-PSVVTYSAV 372

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQDGTD 601
           ++ LCK   +  +  +L  M   GC PD+VT    + A          +E  +   +   
Sbjct: 373 IDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGC 432

Query: 602 FLNELAIRLFKR-----QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            L+ +A  +  R      +      ++E M  + + P   +   +V  LC+  R++ A
Sbjct: 433 ALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEA 490



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/467 (27%), Positives = 245/467 (52%), Gaps = 10/467 (2%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           ++  D T+ +LI+ +  +        +L  M+         +F  + +   + +  ++A+
Sbjct: 48  FRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKAL 107

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           ++FH M+D    K     +  V+  + +      A  ++  +V +     LP+ +T+ ++
Sbjct: 108 QIFHQMID-MKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQS---GCLPDKVTYTVL 163

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           + ++ +    +   Q+F EM  +   P++ TY T+++G CK  R+D+A+ L+  ++  G 
Sbjct: 164 VHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR 223

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P+   ++ LI+GLCK+     A +L +     G + + + Y + I GLC  G LD+A +
Sbjct: 224 SPSGSLYSTLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKA 281

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +  +M+ + C P+ V+Y  II  L K  R  +   ++    ERK      + + L+ GL 
Sbjct: 282 VHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC 341

Query: 379 KEGKAEDAMKLWKQMMEKGCK-PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
           K  + E+A  + ++M+E G + P+ V YSA+IDGLC+  + D+A  +L +M   GC  + 
Sbjct: 342 KSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDV 401

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY++++  F + G+  +A E+++ M +  C  + V Y++LI G C   K+ EA  +  +
Sbjct: 402 VTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEE 461

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE--PKSQP 542
           M  RG +P+VV+ S+++ GLC    VEEA +L  E +  E  P S P
Sbjct: 462 MAGRGIQPNVVSLSTIVDGLCKESRVEEA-RLLMEKMNFESLPDSDP 507



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 101/215 (46%), Gaps = 2/215 (0%)

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
           F  N Y  ++L+     +G   +A +++K  +    +P+   Y  LI G C+  +  +A 
Sbjct: 13  FQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAV 72

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +L EM   G      T+ SL++   E     KA++I+  M       +   Y+V+I  L
Sbjct: 73  NLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHL 132

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C+  KL  A   + +M+  GC PD V Y+ ++H L  A   E+  ++F EM  L     P
Sbjct: 133 CKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEM--LSKGHSP 190

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           ++ TY  ++N  CK   I  ++ L+  +   G  P
Sbjct: 191 ELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSP 225



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 106/225 (47%), Gaps = 23/225 (10%)

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N +T +SL++ F   G   +A  ++KD        ++  Y  LI G C+  ++ +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +  +M + G  P +V + S+I  LC     ++AL++F++M+  + K +PD F Y +++
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMI--DMKVKPDAFLYTVVI 129

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
             LCK + +  +      M+  GC PD VT  + + +L                     F
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSL---------------------F 168

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           K  +   G +I E ML K  SP+  T+  VV   C+  RI  A++
Sbjct: 169 KACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALS 213



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 60/254 (23%), Positives = 110/254 (43%), Gaps = 23/254 (9%)

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G + NT   ++L++     G   EA  +  + +      + FTY +L++GF ++ +  +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           V +  +M         V +  LI  LCE     +A  ++ QM+    KPD   Y+ +I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC    ++ A   F  M  ++    PD  TY +L+++L K         +   M+ +G  
Sbjct: 132 LCKINKLDLAASYFERM--VQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS 189

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           P+LVT   + T +    +A +       + A+ L +R + +G             SP  S
Sbjct: 190 PELVT---YATVVNGYCKAGR------IDQALSLMRRLKGTG------------RSPSGS 228

Query: 637 TWERVVQELCRPKR 650
            +  ++  LC+  R
Sbjct: 229 LYSTLIDGLCKHDR 242


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/476 (31%), Positives = 243/476 (51%), Gaps = 31/476 (6%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           ST  SL+Q +    DF + + V                    KAYG    +  AI  FH 
Sbjct: 168 STASSLLQSHHRLSDFAAAKFV--------------------KAYGDRGDIRGAIHWFHR 207

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
              +    R + S+N++L V ++      A   ++ IV  K   + P+  T+  +I+  C
Sbjct: 208 -AKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIV--KEGVVKPDVSTYTTIIRGYC 264

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTP 262
           ++G+++NA  +F EM    C+P++ TY T+++G CK+  ++ A+ ++D+M + + C P  
Sbjct: 265 KMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDT 321

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+  LI+G CK GEL  A K ++ M  + C PN +TYN +I+GLCL GN+D+A  ++ R
Sbjct: 322 VTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTR 381

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M  +    N  T+ +I+ GL  +G+  D AR L  M       +   Y  +++   K GK
Sbjct: 382 MRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGK 441

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           A+DA+ L K+M  +G  P+   ++A+   L   GK D+A  IL +M   GC  N  +YS+
Sbjct: 442 ADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYST 501

Query: 443 LMKGFFES-GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           ++ G  ++ G+ H+  E   DM +N    +   YS L+ G CEDG    A  ++ +ML  
Sbjct: 502 VIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDM 561

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA-LCK 556
           G   ++ ++ + + GL       E  K F EM    P    D+  Y  +L+  LCK
Sbjct: 562 GYVINLESFLAFVKGLSAKEKAFEVEKFFEEMSRRCPGI--DIHKYRRILDEHLCK 615



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 222/453 (49%), Gaps = 10/453 (2%)

Query: 66  SDEIFNSTPKL--GSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF 123
           S  +F++   L    ++L D      ++ Y + GD +      +R ++ +      S+  
Sbjct: 163 SHGLFSTASSLLQSHHRLSDFAAAKFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNA 222

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I   + KA+ +  A  +F  +V E   K  V ++ +++    + G+   A   ++     
Sbjct: 223 ILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDE---- 278

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENR 242
             M   PN +T+N +I   C+ GL+++A+++  +M    +C PD  TY TL+DG CK   
Sbjct: 279 --MGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGE 336

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L+EA+  ++EM    C P  +T+N +I GLC NG +  A +++  M L G   N  T+ +
Sbjct: 337 LEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTS 396

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           ++ GLC+ G LD A   L  MV      +   YG ++N   K+G+A D   +L  M+ R 
Sbjct: 397 ILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRG 456

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV-GKPDEA 421
            + +   ++ +   L + GK + A  + +QM + GC PN + YS +IDGLC+  G+  E 
Sbjct: 457 INPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEV 516

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           EE + +M  NG   +A  YS L+KG+ E G    A+ ++ +M     V N   +   + G
Sbjct: 517 EEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKG 576

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           L    K  E    + +M  R    D+  Y  ++
Sbjct: 577 LSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRIL 609



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 196/399 (49%), Gaps = 6/399 (1%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           +K     G +  AI  F           +++Y  ++    K NR+  A  + D++  +G 
Sbjct: 189 VKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGV 248

Query: 259 F-PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P   T+  +I G CK G +  A  + D M   GC PN VTYNT+I+G C KG ++ A+
Sbjct: 249 VKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAM 305

Query: 318 SLLDRMVASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
            ++D+M  ++ CMP+ VTY T+I+G  K G   +  + +  M  R    N   Y+ +I G
Sbjct: 306 KIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYG 365

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L   G  ++A ++  +M   G K N   +++++ GLC VGK D+A   L EM+  G  A+
Sbjct: 366 LCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEAD 425

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
           A  Y  ++  + + GK   A+ + K+M       +   ++ +   L E GK  +A ++  
Sbjct: 426 AKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILR 485

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           QM   GC P+ ++YS++I GLC A      ++ F + +C       D   Y+ L+   C+
Sbjct: 486 QMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMC-RNGHHLDASMYSWLVKGYCE 544

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
             N   ++ L   M+D G   +L +   F+  L  K +A
Sbjct: 545 DGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKA 583



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 166/345 (48%), Gaps = 34/345 (9%)

Query: 310 KGNLDKAVSLLDR---MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-EERKFHV 365
           +G++  A+    R   M + +C+    +Y  I+   VK  R +    V   + +E     
Sbjct: 195 RGDIRGAIHWFHRAKKMESGRCL---FSYNAILGVFVKANRIMLARAVFDQIVKEGVVKP 251

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   Y+T+I G  K G  E+A  ++ +M   GCKPN V Y+ +I+G C+ G  + A +I+
Sbjct: 252 DVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAMKIV 308

Query: 426 FEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
            +M     C  +  TY++L+ G+ + G+  +A++  ++M   NC  N + Y+ +I+GLC 
Sbjct: 309 DQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCL 368

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +G + EA+ + T+M   G K +V  ++S++ GLC  G +++A +   EM+ L    + D 
Sbjct: 369 NGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGL--GMEADA 426

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
             Y +++N  CK      +I LL  M  RG +P + + N     L E  +  + G     
Sbjct: 427 KAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGL---- 482

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                            I+  M Q   +P   ++  V+  LC+ K
Sbjct: 483 -----------------ILRQMKQLGCTPNFLSYSTVIDGLCKAK 510


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 148/495 (29%), Positives = 243/495 (49%), Gaps = 42/495 (8%)

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII-QEGLYHRALEFYNHIVNAKHM 186
           Y K  L+E+ + +F+ MV +      VK+ N VL ++  ++     A E YN +V     
Sbjct: 141 YVKKSLLEKCLLVFYKMVSK-GLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVEC--- 196

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I P  +T+N ++ + C+ G+V  A+QL  +M    C P+  TY  L++GL     +++A
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQA 256

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L+ +M   G   +  T++ LI G C+ G++  A++L + M  +G +P  VTYNT+++G
Sbjct: 257 KELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYG 316

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC  G +  A  LLD MV    MP+ V+Y T+I G  +LG   +   +   +  R    +
Sbjct: 317 LCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPS 376

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+TLI GL + G  + AM+L  +M++ G  P+   ++  + G C++G    A+E+  
Sbjct: 377 VVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFD 436

Query: 427 EMINNGCAANAF-----------------------------------TYSSLMKGFFESG 451
           EM+N G   + F                                   TY+  + G  + G
Sbjct: 437 EMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLG 496

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              +A E+ K M  N  V + V Y+ +IH     G LR+AR ++ +MLS+G  P VV Y+
Sbjct: 497 NLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYT 556

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +IH     G ++ A+  F EM   E    P+V TYN L+N LCK   +  + +    M 
Sbjct: 557 VLIHSYAVRGRLKLAILHFFEM--HEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQ 614

Query: 572 DRGCDPDLVTCNIFL 586
            +G  P+  T  I +
Sbjct: 615 AKGISPNKYTYTILI 629



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 234/469 (49%), Gaps = 8/469 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  ++ K  +V+EA++L   M     C     ++N ++N +   G   +A E    I + 
Sbjct: 208 MLDSFCKKGMVQEALQLLFQM-QAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL---IQDM 263

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
             + +  +  T++ +I+  C  G ++ A +L  EM  R   P + TY T+M GLCK  R+
Sbjct: 264 LRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRV 323

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +A  LLD M      P  V++N LI G  + G +G A  L   +  +   P+ VTYNTL
Sbjct: 324 SDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTL 383

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I GLC  G+LD A+ L D M+     P+  T+ T + G  K+G       +   M  R  
Sbjct: 384 IDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGL 443

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             + + Y T I G  K G    A  + ++M+ +G  P+ + Y+  IDGL ++G   EA E
Sbjct: 444 QPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASE 503

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++ +M+ NG   +  TY+S++     +G   KA  ++ +M       + V Y+VLIH   
Sbjct: 504 LVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYA 563

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QP 542
             G+L+ A + + +M  +G  P+V+ Y+++I+GLC    +++A   F EM   + K   P
Sbjct: 564 VRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEM---QAKGISP 620

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           + +TY IL+N  C   +   ++ L   M+DR   PD  T    L  L +
Sbjct: 621 NKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNK 669



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/602 (25%), Positives = 264/602 (43%), Gaps = 106/602 (17%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN--------- 187
           A+R F     +   KR+  S++ +L+++ + GL   A      +V+ K  N         
Sbjct: 64  ALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVVSVKMENGVIDVVSSS 123

Query: 188 --ILPNT-LTFNLVIKTVCRLGLVDNAIQLFREM-------PVRNCE------------- 224
              +P+  L  +L++    +  L++  + +F +M        V+NC              
Sbjct: 124 EVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNI 183

Query: 225 ----------------PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
                           P + TY T++D  CK+  + EA+ LL +MQ  GC P  VT+NVL
Sbjct: 184 DVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVL 243

Query: 269 INGL-----------------------------------CKNGELGRAAKLVDNMFLKGC 293
           +NGL                                   C+ G++  A++L + M  +G 
Sbjct: 244 VNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGA 303

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           +P  VTYNT+++GLC  G +  A  LLD MV    MP+ V+Y T+I G  +LG   +   
Sbjct: 304 VPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFL 363

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   +  R    +   Y+TLI GL + G  + AM+L  +M++ G  P+   ++  + G C
Sbjct: 364 LFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFC 423

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           ++G    A+E+  EM+N G   + F Y + + G  + G   KA  + ++M       + +
Sbjct: 424 KMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 483

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y+V I GL + G L+EA  +  +ML  G  PD V Y+S+IH    AG + +A  LF EM
Sbjct: 484 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEM 543

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             L     P V TY +L+++   +  +  +I     M ++G  P+++T N  +       
Sbjct: 544 --LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALING----- 596

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                           L K ++    +     M  K +SP   T+  ++ E C     Q 
Sbjct: 597 ----------------LCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQE 640

Query: 654 AI 655
           A+
Sbjct: 641 AL 642



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 200/386 (51%), Gaps = 3/386 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P  +T+N ++  +C+ G V +A +L   M  +N  PD+ +Y TL+ G  +   + EA L
Sbjct: 304 VPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFL 363

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L  E++     P+ VT+N LI+GLC+ G+L  A +L D M   G  P+  T+ T + G C
Sbjct: 364 LFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFC 423

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             GNL  A  L D M+     P+   Y T I G +KLG       +   M  R F  +  
Sbjct: 424 KMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLI 483

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+  I GL K G  ++A +L K+M+  G  P+ V Y+++I      G   +A  +  EM
Sbjct: 484 TYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEM 543

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ G   +  TY+ L+  +   G+   A+  + +M +     N + Y+ LI+GLC+  K+
Sbjct: 544 LSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKM 603

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A   + +M ++G  P+   Y+ +I+  CN G  +EAL+L+ +M  L+ + QPD  T+ 
Sbjct: 604 DQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDM--LDREIQPDSCTHR 661

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRG 574
            LL  L K   + H +  L +++  G
Sbjct: 662 SLLKHLNKDYKL-HVVRHLENVIAAG 686



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 209/435 (48%), Gaps = 4/435 (0%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D T+  L+   ++SG+ +  + ++  M R    V   ++  + + Y +   +EEA RL  
Sbjct: 237 DVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGE 296

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+       TV ++N+++  + + G    A +  + +VN    N++P+ +++N +I   
Sbjct: 297 EMLSRGAVP-TVVTYNTIMYGLCKWGRVSDARKLLDVMVNK---NLMPDLVSYNTLIYGY 352

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            RLG +  A  LF E+  R+  P + TY TL+DGLC+   LD A+ L DEM   G  P  
Sbjct: 353 TRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDV 412

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TF   + G CK G L  A +L D M  +G  P+   Y T I G    G+  KA  + + 
Sbjct: 413 FTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEE 472

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+A    P+ +TY   I+GL KLG   + + ++  M       +   Y+++I      G 
Sbjct: 473 MLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGH 532

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A  L+ +M+ KG  P+ V Y+ LI      G+   A    FEM   G   N  TY++
Sbjct: 533 LRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNA 592

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G  +  K  +A   + +M       N+  Y++LI+  C  G  +EA  ++  ML R 
Sbjct: 593 LINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE 652

Query: 503 CKPDVVAYSSMIHGL 517
            +PD   + S++  L
Sbjct: 653 IQPDSCTHRSLLKHL 667


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 245/518 (47%), Gaps = 25/518 (4%)

Query: 131 AHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
           A+  EEA+ +    + E  C     S++ VL  +    +  RAL+    ++  +     P
Sbjct: 205 ANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLL-QMMAKQGGACSP 263

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + + ++ VI      G    A  LF EM  +  +PD+ TY  ++D LCK   +D+A L+L
Sbjct: 264 DVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVL 323

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M  DG  P  VT++ +I+G    G L  AAK+   M  +G +PN VT N+ +  LC  
Sbjct: 324 RQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKH 383

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G   +A    D M A    P+  +Y T+++G    G   D   +  SM+      N +++
Sbjct: 384 GRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVF 443

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI    K G  +DAM ++ +M ++G  P+ V YS +I    R+G+  +A E   +M+ 
Sbjct: 444 TILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVA 503

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIHGLCEDGKLR 489
            G   N   YSS+++GF   G   KA E+  +M        ++  +S +I+ LC+DG++ 
Sbjct: 504 RGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVM 563

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  ++      G +P V+ ++S+I G C  G +++A K+ + M  +    +PD+ TYN 
Sbjct: 564 DAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVV--GVEPDIVTYNT 621

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           LL+   K   I+  + L   M  +G  P+ VT  I L                       
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG--------------------- 660

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           LF+  RT    K    M++   +   S +  ++  LCR
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 138/475 (29%), Positives = 227/475 (47%), Gaps = 26/475 (5%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN--CEPDIYTYCTLMDGLCKENRL 243
           +  +PN +++++V+K +C   +   A+ L + M  +   C PD+  Y T++ G   E   
Sbjct: 222 LGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGET 281

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +A  L  EM   G  P  VT+N++I+ LCK   + +A  ++  M   G  P+ VTY+ +
Sbjct: 282 GKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCM 341

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           IHG    G L +A  +   M     +PN VT  + +  L K GR+ + A    SM  +  
Sbjct: 342 IHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH 401

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             + + Y TL+ G   EG   D + L+  M   G   N  V++ LI    + G  D+A  
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAML 461

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           I  EM   G + +  TYS+++  F   G+   A+E +  M       N   YS +I G C
Sbjct: 462 IFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFC 521

Query: 484 EDGKLREARMVWTQMLSRGC-KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
             G L +A+ + ++M+++G  +PD+V +SS+I+ LC  G V +A  +F+  L  +   +P
Sbjct: 522 MHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFD--LATDIGERP 579

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
            V T+N L++  C    +  +  +L++M   G +PD+VT N  L           DG   
Sbjct: 580 GVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLL-----------DG--- 625

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
                   FK  R + G  +   M +K + P T T+  ++  L R  R  AA  K
Sbjct: 626 -------YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKK 673



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 245/532 (46%), Gaps = 58/532 (10%)

Query: 93  YANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCK 151
           YAN  + +++ ++L+RM     V    S+  + KA     + + A+ L   M  +   C 
Sbjct: 204 YANRTE-EAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACS 262

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
             V ++++V++    EG   +A   ++ +       + P+ +T+NL+I  +C+   +D A
Sbjct: 263 PDVVAYSTVIHGFFNEGETGKACSLFHEMT---RQGVKPDVVTYNLIIDALCKARAMDKA 319

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
             + R+M     +PD  TY  ++ G     RL EA  +  EM+  G  P  VT N  +  
Sbjct: 320 ELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLAS 379

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK+G    AA+  D+M  KG  P+  +Y TL+HG   +G     + L + M ++    N
Sbjct: 380 LCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAAN 439

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
              +  +I+   K G   D   +   M+++    +   YST+IS   + G+  DAM+ + 
Sbjct: 440 CHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFN 499

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA----------------- 434
           QM+ +G +PNT VYS++I G C  G   +A+E++ EMIN G                   
Sbjct: 500 QMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKD 559

Query: 435 -------------------ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
                                  T++SL+ G+   GK  KA +I   M       + V Y
Sbjct: 560 GRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTY 619

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + L+ G  ++G++ +   ++ +M  +G KP+ V Y  M+ GL  AG    A K F+EM  
Sbjct: 620 NTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM-- 677

Query: 536 LEPKSQPDVFTYNILLNALCKQS---------------NISHSIDLLNSMMD 572
           +E  +   V  Y I+L  LC+ +               N+  SI +LN+M++
Sbjct: 678 IESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMIN 729



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 219/453 (48%), Gaps = 11/453 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  +I  YA  G  K    +   M++      +V   SF+     +G++   +EA   F
Sbjct: 337 TYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRS---KEAAEFF 393

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            +M  + H K  + S+ ++L+    EG +   +  +N +   K   I  N   F ++I  
Sbjct: 394 DSMTAKGH-KPDIFSYCTLLHGYASEGCFADMIGLFNSM---KSNGIAANCHVFTILIHA 449

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G+VD+A+ +F EM  +   PD+ TY T++    +  RL +A+   ++M   G  P 
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPN 509

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-LPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              ++ +I G C +G L +A +LV  M  KG   P+ V ++++I+ LC  G +  A  + 
Sbjct: 510 TAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D        P  +T+ ++I+G   +G+     ++L +ME      +   Y+TL+ G FK 
Sbjct: 570 DLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKN 629

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+  D + L+++M  KG KPNTV Y  ++ GL R G+   A +   EMI +G       Y
Sbjct: 630 GRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIY 689

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
             ++ G   +    +A+ +++ +   N  ++    + +I+ + +  +  EA+ ++  + +
Sbjct: 690 GIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISA 749

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            G  P+   Y  MI  L   G VE+A  +F+ M
Sbjct: 750 SGLLPNESTYGVMIINLLKDGGVEDANNMFSSM 782



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 215/447 (48%), Gaps = 5/447 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++ +L+  YA+ G F  +  +   M+          F  +  AY K  +V++A+ +F  M
Sbjct: 407 SYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEM 466

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V ++++V++   + G    A+E +N +V      I PNT  ++ +I+  C 
Sbjct: 467 QQQ-GVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMV---ARGIQPNTAVYSSIIQGFCM 522

Query: 205 LGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
            G +  A +L  EM  +    PDI  + ++++ LCK+ R+ +A  + D     G  P  +
Sbjct: 523 HGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVI 582

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           TFN LI+G C  G++ +A K++D M + G  P+ VTYNTL+ G    G ++  ++L   M
Sbjct: 583 TFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREM 642

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                 PN VTYG ++ GL + GR V   +    M E    V   IY  ++ GL +   A
Sbjct: 643 QRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCA 702

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A+ L++++     K +  + + +I+ + +V + +EA+E+   +  +G   N  TY  +
Sbjct: 703 DEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVM 762

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +    + G    A  ++  M K+  V      + +I  L E G++ +A    +++  +  
Sbjct: 763 IINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRI 822

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLF 530
             +    S M+      G  +E +KL 
Sbjct: 823 LLEASTTSLMLSLFSRKGKYQEDIKLL 849



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 23/299 (7%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFI 122
           + +IF+    +G  + G  TF SLI  Y   G       +L  M     E  +V   ++ 
Sbjct: 565 AHDIFDLATDIGE-RPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIV---TYN 620

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL------EF 176
            +   Y K   + + + LF  M      ++ VK  N+V   I+  GL+          +F
Sbjct: 621 TLLDGYFKNGRINDGLTLFREMQ-----RKGVKP-NTVTYGIMLAGLFRAGRTVAARKKF 674

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           +  I +   + +      + +++  +CR    D AI LF+++   N +  I    T+++ 
Sbjct: 675 HEMIESGTTVTVS----IYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINA 730

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           + K  R +EA  L   +   G  P   T+ V+I  L K+G +  A  +  +M   G +P 
Sbjct: 731 MYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPG 790

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
               N +I  L  KG + KA + L ++   + +    T   +++   + G+  +  ++L
Sbjct: 791 SRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  232 bits (591), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 205/388 (52%), Gaps = 2/388 (0%)

Query: 191  NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
            N  ++N+VI  VC+LG +  A  L   M ++   PD+ +Y T+++G C+   LD+   L+
Sbjct: 688  NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747

Query: 251  DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            + M+  G  P    +  +I  LC+  +L  A +    M  +G LP+ V Y TLI G C +
Sbjct: 748  EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807

Query: 311  GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
            G++  A      M +    P+ +TY  II+G  ++G  V+  ++   M  +    +   +
Sbjct: 808  GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 867

Query: 371  STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
            + LI+G  K G  +DA ++   M++ GC PN V Y+ LIDGLC+ G  D A E+L EM  
Sbjct: 868  TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 927

Query: 431  NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
             G   N FTY+S++ G  +SG   +AV++  +        + V Y+ L+   C+ G++ +
Sbjct: 928  IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 987

Query: 491  ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
            A+ +  +ML +G +P +V ++ +++G C  G +E+  KL N ML       P+  T+N L
Sbjct: 988  AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA--KGIAPNATTFNSL 1045

Query: 551  LNALCKQSNISHSIDLLNSMMDRGCDPD 578
            +   C ++N+  +  +   M  RG  PD
Sbjct: 1046 VKQYCIRNNLKAATAIYKDMCSRGVGPD 1073



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 218/453 (48%), Gaps = 6/453 (1%)

Query: 154  VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
            V S+++V+N   + G   +    +  I   K   + PN+  +  +I  +CR+  +  A +
Sbjct: 724  VISYSTVVNGYCRFGELDKV---WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 780

Query: 214  LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
             F EM  +   PD   Y TL+DG CK   +  A     EM      P  +T+  +I+G C
Sbjct: 781  AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 840

Query: 274  KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
            + G++  A KL   MF KG  P+ VT+  LI+G C  G++  A  + + M+ + C PN V
Sbjct: 841  QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 900

Query: 334  TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            TY T+I+GL K G       +L  M +     N + Y+++++GL K G  E+A+KL  + 
Sbjct: 901  TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 960

Query: 394  MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
               G   +TV Y+ L+D  C+ G+ D+A+EIL EM+  G      T++ LM GF   G  
Sbjct: 961  EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 1020

Query: 454  HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
                ++   M       N   ++ L+   C    L+ A  ++  M SRG  PD   Y ++
Sbjct: 1021 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 1080

Query: 514  IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
            + G C A +++EA  LF EM          V TY++L+    K+     + ++ + M   
Sbjct: 1081 VKGHCKARNMKEAWFLFQEMKG--KGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 1138

Query: 574  GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            G   D    + F +  K K + P    D ++E+
Sbjct: 1139 GLAADKEIFD-FFSDTKYKGKRPDTIVDPIDEI 1170



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/507 (27%), Positives = 242/507 (47%), Gaps = 21/507 (4%)

Query: 104  MVLYRMRREKRVVLEKSF------------IFIFKAYGKAHLVEEAIRLFHTMVDEFHCK 151
            +V + + RE R V EK              +++ +     +    AI +F    +   C 
Sbjct: 628  LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVC- 686

Query: 152  RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
              V S+N V++ + Q G   R  E ++ ++  +     P+ ++++ V+   CR G +D  
Sbjct: 687  WNVASYNIVIHFVCQLG---RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 743

Query: 212  IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
             +L   M  +  +P+ Y Y +++  LC+  +L EA     EM   G  P  V +  LI+G
Sbjct: 744  WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 803

Query: 272  LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
             CK G++  A+K    M  +   P+ +TY  +I G C  G++ +A  L   M      P+
Sbjct: 804  FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863

Query: 332  EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             VT+  +ING  K G   D  RV   M +     N   Y+TLI GL KEG  + A +L  
Sbjct: 864  SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 923

Query: 392  QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            +M + G +PN   Y+++++GLC+ G  +EA +++ E    G  A+  TY++LM  + +SG
Sbjct: 924  EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 983

Query: 452  KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
            +  KA EI K+M         V ++VL++G C  G L +   +   ML++G  P+   ++
Sbjct: 984  EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 1043

Query: 512  SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            S++   C   +++ A  ++ +M        PD  TY  L+   CK  N+  +  L   M 
Sbjct: 1044 SLVKQYCIRNNLKAATAIYKDM--CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 1101

Query: 572  DRGCDPDLVTCNIFLTAL---KEKLEA 595
             +G    + T ++ +      K+ LEA
Sbjct: 1102 GKGFSVSVSTYSVLIKGFLKRKKFLEA 1128



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 168/347 (48%), Gaps = 4/347 (1%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            T+ ++I  +   GD      + + M  +       +F  +   Y KA  +++A R+ + M
Sbjct: 831  TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 890

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            + +  C   V ++ ++++ + +EG    A E  + +     + + PN  T+N ++  +C+
Sbjct: 891  I-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK---IGLQPNIFTYNSIVNGLCK 946

Query: 205  LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
             G ++ A++L  E        D  TY TLMD  CK   +D+A  +L EM   G  PT VT
Sbjct: 947  SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 1006

Query: 265  FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            FNVL+NG C +G L    KL++ M  KG  PN  T+N+L+   C++ NL  A ++   M 
Sbjct: 1007 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 1066

Query: 325  ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +    P+  TY  ++ G  K     +   +   M+ + F V+   YS LI G  K  K  
Sbjct: 1067 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 1126

Query: 385  DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +A +++ QM  +G   +  ++    D   +  +PD   + + E+I N
Sbjct: 1127 EAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 1173



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 171/397 (43%), Gaps = 63/397 (15%)

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL---CLKGNLDKAVS 318
           P  F+V    L   G L  A ++ + M   G + +  + N  +  L   C K     A+ 
Sbjct: 618 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TAII 675

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +           N  +Y  +I+ + +LGR  +   +L+ ME + +  +   YST+++G  
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           + G+ +   KL + M  KG KPN+ +Y ++I  LCR+ K  EAE                
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE---------------- 779

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
                              E + +M +   + + V Y+ LI G C+ G +R A   + +M
Sbjct: 780 -------------------EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 820

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
            SR   PDV+ Y+++I G C  G + EA KLF+EM C     +PD  T+  L+N  CK  
Sbjct: 821 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC--KGLEPDSVTFTELINGYCKAG 878

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           ++  +  + N M+  GC P++VT    +  L       +   D  NEL   ++K      
Sbjct: 879 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL-----CKEGDLDSANELLHEMWKIG---- 929

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                       L P   T+  +V  LC+   I+ A+
Sbjct: 930 ------------LQPNIFTYNSIVNGLCKSGNIEEAV 954


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 154/524 (29%), Positives = 255/524 (48%), Gaps = 7/524 (1%)

Query: 68   EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSL-EMVLYRMRREKRVVLEKSFIFIFK 126
            + F    K  +Y+   ST+ +LI        +  + +M+   +R    VV       + +
Sbjct: 1098 QFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVR 1157

Query: 127  AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
              G A +V +AI +F+  +    C+   +++NS++ +++ EG Y +  + YN +    H 
Sbjct: 1158 MLGNAKMVRQAITIFY-QIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGH- 1215

Query: 187  NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
               P+T+T++ +I   C+LG  D+AIQL  EM     +P    Y  L+    K N    A
Sbjct: 1216 -CFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 1274

Query: 247  VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
            + L +EM+   C P   T+  LI GL K G +  A      M  +GC P+ V  N +I+ 
Sbjct: 1275 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 1334

Query: 307  LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHV 365
            L   G LD A+ L   M   +C+P+ VTY TII  L +   RA +       M+E     
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394

Query: 366  NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
            + + YS LI G  K  + E AM L ++M EKG  P    Y +LID L +  + D A E+ 
Sbjct: 1395 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 1454

Query: 426  FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             E+  N  +++A  Y+ ++K   ++G+   A+ ++ +M K  C  +   Y+ L+ GL   
Sbjct: 1455 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 1514

Query: 486  GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            G L EA     +M   GC PD+ +Y+ +++GL   G    A+++ + M   +   +PDV 
Sbjct: 1515 GMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMK--QSTVRPDVV 1572

Query: 546  TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +YN +L AL        +  L+  M   G + DL+T +  L A+
Sbjct: 1573 SYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAI 1616



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 136/531 (25%), Positives = 232/531 (43%), Gaps = 57/531 (10%)

Query: 116  VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
            VL++ FI I K +      E+A+ +    VD +  +  +K+   V NV +Q         
Sbjct: 1049 VLDERFIRILKIFKWGPDAEKALEVLMLRVDHWLVREVMKTDVGV-NVKMQ--------- 1098

Query: 176  FYNHIVNAKHMNILPNTLTFNLVI---KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
            F+     AK  N   +T T+  +I   + V + G +   IQ     P+    P   +   
Sbjct: 1099 FFRWA--AKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVV 1156

Query: 233  LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
             M G  K  R  +A+ +  +++   C P    +N +I  L   G+  +  +L + M  +G
Sbjct: 1157 RMLGNAKMVR--QAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEG 1214

Query: 293  -CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
             C P+ VTY+ LI   C  G  D A+ LL+ M      P    Y  +I    K   A   
Sbjct: 1215 HCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGA 1274

Query: 352  ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
              +   M  +    + + Y+ LI GL K G+ ++A   + +M  +GC+P+TV  + +I+ 
Sbjct: 1275 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINF 1334

Query: 412  LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW-KDMAKNNCVY 470
            L + G+ D+A ++  EM    C  +  TY++++K  FES      V  W + M ++    
Sbjct: 1335 LGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 1394

Query: 471  NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS------------------ 512
            +   YS+LI G C+  ++ +A M+  +M  +G  P   AY S                  
Sbjct: 1395 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 1454

Query: 513  -----------------MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
                             MI  L  AG +++A+ +F+EM  L     PDV+ YN L++ L 
Sbjct: 1455 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKL--GCAPDVYAYNALMSGLA 1512

Query: 556  KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            +   +  ++  +  M + GC PD+ + NI L  L  K   P    + L+ +
Sbjct: 1513 RTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLA-KTGGPHRAMEMLSNM 1562



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 162/335 (48%), Gaps = 11/335 (3%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRRE----KRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
            T+  LI+    +G           M+RE      V +     F+    GKA  +++A++L
Sbjct: 1292 TYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFL----GKAGRLDDAMKL 1347

Query: 141  FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
            F  M +   C  +V ++N+++  + +     RA E  +     K   I P++ T++++I 
Sbjct: 1348 FQEM-ETLRCIPSVVTYNTIIKALFES--KSRASEVPSWFERMKESGISPSSFTYSILID 1404

Query: 201  TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              C+   ++ A+ L  EM  +   P    YC+L+D L K  R D A  L  E++ +    
Sbjct: 1405 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 1464

Query: 261  TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
            +   + V+I  L K G L  A  + D M   GC P+   YN L+ GL   G LD+A+S +
Sbjct: 1465 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 1524

Query: 321  DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             RM    C+P+  +Y  I+NGL K G       +L +M++     +   Y+T++  L   
Sbjct: 1525 RRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHA 1584

Query: 381  GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
            G  E+A KL K+M   G + + + YS++++ + +V
Sbjct: 1585 GMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKV 1619



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 150/363 (41%), Gaps = 67/363 (18%)

Query: 299  TYNTLIHGLCLK-----GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            TY  LIH  CL+     G + K +  + R       P E++    + G  K+ R      
Sbjct: 1115 TYMALIH--CLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVR--QAIT 1170

Query: 354  VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGL 412
            +   ++ RK       Y+++I  L  EG+ E   +L+ +M  +G C P+TV YSALI   
Sbjct: 1171 IFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAF 1230

Query: 413  CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            C++G+ D A ++L EM   G       Y+ L+  FF+    H A+ ++++M    C    
Sbjct: 1231 CKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYC---- 1286

Query: 473  VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
                                           +PDV  Y+ +I GL  AG ++EA   F E
Sbjct: 1287 -------------------------------RPDVFTYTELIRGLGKAGRIDEAYHFFCE 1315

Query: 533  MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            M       +PD    N ++N L K   +  ++ L   M    C P +VT N  + AL E 
Sbjct: 1316 MQ--REGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFES 1373

Query: 593  LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                 +   +        F+R + SG            +SP + T+  ++   C+  R++
Sbjct: 1374 KSRASEVPSW--------FERMKESG------------ISPSSFTYSILIDGFCKTNRME 1413

Query: 653  AAI 655
             A+
Sbjct: 1414 KAM 1416


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 235/447 (52%), Gaps = 9/447 (2%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +LI+ +   G  K+   ++  +     V+   S+  +   Y K+  +EEA+R+    +D 
Sbjct: 119 ALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEALRV----LDR 174

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
                   ++++VL  +   G   +A++     + +K     P+ +T  ++I   C+   
Sbjct: 175 MGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK---CYPDVVTCTVLIDATCKESG 231

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V  A++LF EM  + C+PD+ TY  L+ G CK  RLDEA+  L ++   GC P  ++ N+
Sbjct: 232 VGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNM 291

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           ++  LC  G    A KL+  M  KGCLP+ VT+N LI+ LC KG L KA+++L+ M    
Sbjct: 292 ILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHG 351

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
             PN  ++  +I G    G+ +D A   L  M  R  + +   Y+ L++ L K+GK +DA
Sbjct: 352 HTPNSRSFNPLIQGFCN-GKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 410

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           + +  Q+  KGC P+ + Y+ +IDGL +VGK + A E+L EM   G   +  T +S++ G
Sbjct: 411 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGG 470

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
               GK  +A++ +  + +     N   Y+ +I GLC+  +   A      M+++GCKP 
Sbjct: 471 LSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPT 530

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEM 533
              Y+++I G+   G  E+A KL NE+
Sbjct: 531 EATYTTLIKGITYEGLAEDASKLSNEL 557



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 230/487 (47%), Gaps = 39/487 (8%)

Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           L  +I+ G       F  ++ N       P+ +    +I+  C++G   NA Q+   +  
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKS---PDVIACTALIREFCKIGRTKNASQIMGILEE 142

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE--------------------------MQ 254
                D+ +Y  L+ G CK   ++EA+ +LD                           MQ
Sbjct: 143 SGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 255 VDG------CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           V G      C+P  VT  VLI+  CK   +G+A KL + M  KGC P+ VTYN LI G C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G LD+A+  L ++ +  C P+ +++  I+  L   GR +D  ++L +M  +    +  
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ LI+ L ++G    A+ + + M + G  PN+  ++ LI G C     D A E L  M
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ GC  +  TY+ L+    + GK   AV I   ++   C  + + Y+ +I GL + GK 
Sbjct: 383 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 442

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  +M  +G KPD++  +S++ GL   G V EA+K F+ +     +  P+ F YN
Sbjct: 443 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIR--PNAFIYN 500

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            ++  LCK    S +ID L  M+ +GC P   T    +  +  +  A +D +   NEL  
Sbjct: 501 SIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLA-EDASKLSNELYS 559

Query: 609 R-LFKRQ 614
           R L KR 
Sbjct: 560 RGLVKRS 566



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 219/421 (52%), Gaps = 8/421 (1%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D T Y+ LI  Y  SG+ +    VL RM          + +      GK   +++A+++ 
Sbjct: 148 DVTSYNVLISGYCKSGEIEEALRVLDRMGVSPNAATYDAVLCSLCDRGK---LKQAMQVL 204

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
              + +  C   V +   +++   +E    +A++ +N + N       P+ +T+N++IK 
Sbjct: 205 GRQL-QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNK---GCKPDVVTYNVLIKG 260

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+ G +D AI+  +++P   C+PD+ ++  ++  LC   R  +A+ LL  M   GC P+
Sbjct: 261 FCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPS 320

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VTFN+LIN LC+ G LG+A  +++ M   G  PN  ++N LI G C    +D+A+  L+
Sbjct: 321 VVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLE 380

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            MV+  C P+ VTY  ++  L K G+  D   +L  +  +    +   Y+T+I GL K G
Sbjct: 381 IMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVG 440

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           KAE A++L ++M  KG KP+ +  ++++ GL R GK  EA +    +       NAF Y+
Sbjct: 441 KAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYN 500

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           S++ G  +S +   A++   DM    C   E  Y+ LI G+  +G   +A  +  ++ SR
Sbjct: 501 SIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSR 560

Query: 502 G 502
           G
Sbjct: 561 G 561



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 223/473 (47%), Gaps = 56/473 (11%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           ++ + R G ++   +    M  +   PD+     L+   CK  R   A  ++  ++  G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
                ++NVLI+G CK+GE+  A +++D M   G  PN  TY+ ++  LC +G L +A+ 
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +L R + SKC P+ VT                                    + LI    
Sbjct: 203 VLGRQLQSKCYPDVVTC-----------------------------------TVLIDATC 227

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           KE     AMKL+ +M  KGCKP+ V Y+ LI G C+ G+ DEA   L ++ + GC  +  
Sbjct: 228 KESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVI 287

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           +++ +++     G+   A+++   M +  C+ + V +++LI+ LC+ G L +A  V   M
Sbjct: 288 SHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMM 347

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
              G  P+  +++ +I G CN   ++ A++    M+       PD+ TYNILL ALCK  
Sbjct: 348 PKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMV--SRGCYPDIVTYNILLTALCKDG 405

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS- 617
            +  ++ +L+ +  +GC P L++ N  +  L  K+   +   + L E+  +  K    + 
Sbjct: 406 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLL-KVGKAELAVELLEEMCYKGLKPDLITC 464

Query: 618 ----GGF----KIVEVM-----LQKF-LSPQTSTWERVVQELCRPKRIQAAIN 656
               GG     K+ E M     L++F + P    +  ++  LC+ ++   AI+
Sbjct: 465 TSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAID 517



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 144/269 (53%), Gaps = 4/269 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A++L  TM+ +  C  +V +FN ++N + Q+GL  +AL     +    H    PN+ +F
Sbjct: 304 DAMKLLATMLRK-GCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHT---PNSRSF 359

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N +I+  C    +D AI+    M  R C PDI TY  L+  LCK+ ++D+AV++L ++  
Sbjct: 360 NPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSS 419

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            GC P+ +++N +I+GL K G+   A +L++ M  KG  P+ +T  +++ GL  +G + +
Sbjct: 420 KGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVRE 479

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+     +      PN   Y +II GL K  +       L  M  +     E  Y+TLI 
Sbjct: 480 AMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIK 539

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           G+  EG AEDA KL  ++  +G    ++V
Sbjct: 540 GITYEGLAEDASKLSNELYSRGLVKRSLV 568


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  231 bits (590), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 253/531 (47%), Gaps = 70/531 (13%)

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           +RLF  +  +   + +V ++N  L+ + +      A E +  +   +     P+  T+++
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM---QRRGYPPDDFTYSI 78

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           V++ +C+ G +D A +L  ++     + ++ TY  ++DG CK +R+D+A+ +   M   G
Sbjct: 79  VLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGG 138

Query: 258 -CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            C P  VTFN L+ GLC    +  A  L + M   GC PN ++Y+TL+ GLC  G LD+A
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEA 198

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             L + MV   C+P+ V Y + + GL K  R  +       M  +    +   +ST+I  
Sbjct: 199 CRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258

Query: 377 LFKEGKAEDAM-----------------KLWKQMMEKG---------------------- 397
           L K+G AE+A                  K +++M+ +                       
Sbjct: 259 LCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLP 318

Query: 398 ----------------CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
                           C PN   Y+ ++D LC+  + DEA+E++ EM N G + +  TYS
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ G  + GK  +A ++ ++M+K     +    + +++ L + GK+  A      M +R
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G  PD+V Y++++ GLC AG ++EA+    +M  +  K  PDVF+Y I++ ALC+    +
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM--VAAKCTPDVFSYTIIITALCRSGQAA 496

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
            +  +   M+ RG  PD V  +  L  L           + L +LA+ L K
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLAR---------NGLEDLALELLK 538



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 140/534 (26%), Positives = 246/534 (46%), Gaps = 29/534 (5%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E F    + G Y   D T+  +++    +G+    + +L ++R     +   ++  +   
Sbjct: 59  EKFQQMQRRG-YPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDG 117

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
             KA  V++A+ +F TM     C   V +FNS+L  +        A   + ++  A    
Sbjct: 118 CCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKA---G 174

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             PN ++++ ++  +C+ G +D A +L+ EM  ++C PD+  Y + + GLCK NR+ EA 
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 248 LLLDEMQVDGCFPTPVTF-----------------NVLINGLCKNGELGRAAKLVDNMFL 290
               +M   G     V F                 N +I  LC++G L  A K  + M  
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK---CMPNEVTYGTIINGLVKLGR 347
           +   P+   +NTLIH +C    L   V L  RM + K   C PN  TY  +++ L K  +
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +   ++  M       +   YS L+ GL K GK + A  L ++M ++G  P++   ++
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +++ L + GK D A   L  M   G   +  TY++L+ G  ++G+  +A+     M    
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  +   Y+++I  LC  G+   A  ++ +M+ RG  PD V Y S++ GL   G  + AL
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLAL 534

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +L    LC     +PD   + ++++ LCK      + +++  M D G   D  T
Sbjct: 535 ELLKTSLC-----KPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFT 583



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 107/338 (31%), Positives = 191/338 (56%), Gaps = 4/338 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           ++ +++EA + F  M+   H   + + FN++++ + +       +  +  + + K     
Sbjct: 278 RSGMLDEACKTFEEMISRNH-PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCP 336

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  T+N+++  +C+   +D A +L  EM      PD+ TY  L+DGLCK  +LD A  L
Sbjct: 337 PNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDL 396

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+EM  +G FP   T   ++N L K G++  A   ++ M  +G  P+ VTYNTL+ GLC 
Sbjct: 397 LEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCK 456

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +D+A++ L +MVA+KC P+  +Y  II  L + G+A     +   M +R    +  +
Sbjct: 457 AGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVL 516

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y +L+ GL + G  + A++L K  +   CKP+ V++  ++DGLC+ GK ++A E++  M 
Sbjct: 517 YHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVVDGLCKAGKAEDACEVVERMA 573

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           + G  A+AFTY ++++G  + GK  KA ++  D ++ +
Sbjct: 574 DAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETH 611



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 190/436 (43%), Gaps = 72/436 (16%)

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           KG   +  TYN  +  L        A     +M      P++ TY  ++ GL K G    
Sbjct: 32  KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDK 91

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALI 409
              +L  + E    +N   YS +I G  K  + +DA++++K M   G C P+ V +++L+
Sbjct: 92  AKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLL 151

Query: 410 DGLCRVGKPDEAEEILFE-MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
            GLC   +  EA  +LFE M   GC  N  +YS+L+ G  ++G+  +A  +W++M + +C
Sbjct: 152 KGLCSGERMSEAF-VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS---------------- 512
           V + V Y+  + GLC+  ++ EA     +M+++G K D VA+S+                
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270

Query: 513 -MIHGLCNAGSVEEALKLFNEMLCL-EPKSQ----------------------------- 541
            MI  LC +G ++EA K F EM+    P S                              
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330

Query: 542 ------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
                 P++ TYNI+++ LCK   +  + +L+N M + G  PD+VT +  +  L  KL  
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLC-KLGK 389

Query: 596 PQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
                D L E++                 L K  +       +E M  +  +P   T+  
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449

Query: 641 VVQELCRPKRIQAAIN 656
           ++  LC+  RI  AI 
Sbjct: 450 LLDGLCKAGRIDEAIT 465


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 150/521 (28%), Positives = 250/521 (47%), Gaps = 9/521 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E+ N   KLG        + S+I     +G  +  E++   M        + ++  +   
Sbjct: 351 ELLNKVGKLGVVP-NLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDG 409

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           +G+   ++ A   F+ M+ E     TV S+NS++N   + G    A   +  +V+     
Sbjct: 410 FGRRAKLDVAFYYFNKMI-ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDK---G 465

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           + P   T+  +I   C+ GLV  A +L+ EM  +   P+  T+  L+ GLC+ N++ EA 
Sbjct: 466 LKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEAS 525

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L DEM      P  VT+NVLI G C+ G   RA +L+D M  KG  P+  TY  LI GL
Sbjct: 526 KLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGL 585

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G + +A   ++ +       +E+ Y  ++ G  K GR  +       M  R   ++ 
Sbjct: 586 CSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDL 645

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ LISG   +       +L ++M  KG +P+ V+Y+ LIDG  + G   +A E  + 
Sbjct: 646 VSYAVLISGALNQND-RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYI 704

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           MI  G   N+ TY++L+ G F++G  ++A  ++K M     + N + Y   +  L ++G 
Sbjct: 705 MIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGN 764

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A  +   ML +G   + V Y+ +I G C  G  +EA KL + M+ +     PD  TY
Sbjct: 765 MENALQLHNAML-QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGI--GMVPDCITY 821

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +  +   CK+ N+  ++D+   M+ RG  PD V  N  + A
Sbjct: 822 STFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHA 862



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 228/420 (54%), Gaps = 5/420 (1%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           +LP   T + ++  + R+      ++LF  +     +PD Y Y  ++  LC+    ++A 
Sbjct: 186 LLPEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAK 245

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            ++++ + +GC  + VT+NV INGLCK+  +  A ++  ++  KG   + VTY TL+ GL
Sbjct: 246 EIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGL 305

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV-N 366
           C     +  + ++D M+    +P+E     +I GL+K+G +++GA  L++   +   V N
Sbjct: 306 CRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMG-SIEGAFELLNKVGKLGVVPN 364

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            ++Y+++I+ L K GK E+A  L+  M E+G  PN V Y+ LIDG  R  K D A     
Sbjct: 365 LFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFN 424

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +MI  G +A  ++Y+S++    + GK   A  ++K+M           Y+ LI G C+DG
Sbjct: 425 KMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDG 484

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            + +A  ++ +M  +G  P+ V ++++I GLC    + EA KLF+EM  +E K  P+  T
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEM--VELKILPNEVT 542

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN+L+   C++ N + + +LL+ M+ +G  PD  T    +  L        +  +F+N+L
Sbjct: 543 YNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRV-SEAKEFINDL 601



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 146/527 (27%), Positives = 246/527 (46%), Gaps = 61/527 (11%)

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           +I+ G    A E  N +     + ++PN   +N +I ++C+ G ++ A  LF  M  R  
Sbjct: 340 LIKMGSIEGAFELLNKV---GKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGL 396

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
            P+  TY  L+DG  +  +LD A    ++M   G   T  ++N +IN  CK G++  A  
Sbjct: 397 NPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAEL 456

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           L   M  KG  P   TY +LI G C  G + KA  L   M      PN VT+  +I GL 
Sbjct: 457 LFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLC 516

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           ++ +  + +++   M E K   NE  Y+ LI G  +EG    A +L  +M++KG  P+T 
Sbjct: 517 QINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTY 576

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV------ 457
            Y  LI GLC  G+  EA+E + ++ +     +   Y++L++GF + G+  +A+      
Sbjct: 577 TYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEM 636

Query: 458 ----------------------------EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                                       E+ ++M       + V Y++LI G  + G L+
Sbjct: 637 VGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLK 696

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A   W  M+  G  P+ V Y+++++GL  AG V EA  LF  ML  E  + P+  TY  
Sbjct: 697 KAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGE--AIPNHITYGC 754

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            L+ L K+ N+ +++ L N+M+ +G   + VT NI +                      +
Sbjct: 755 FLDHLTKEGNMENALQLHNAML-QGSFANTVTYNILIRGY------------------CQ 795

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           + K Q  +   K+++VM+   + P   T+   + E C+   + AA++
Sbjct: 796 IGKFQEAA---KLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMD 839



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 155/600 (25%), Positives = 260/600 (43%), Gaps = 86/600 (14%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           S F  LIQHY  +       +V+  MR    +   ++   +  A  +     + + LF T
Sbjct: 156 SGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDT 215

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           +V+    K     +  V+  + +   +++A E  N    A+      + +T+N+ I  +C
Sbjct: 216 LVNA-GVKPDCYIYTVVVKCLCELKDFNKAKEIINQ---AEGNGCSLSIVTYNVFINGLC 271

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM---------- 253
           +   V  A+++ R +  +  + D+ TYCTL+ GLC+    +  + ++DEM          
Sbjct: 272 KSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEA 331

Query: 254 -------------QVDGCF------------PTPVTFNVLINGLCKNGELGRAAKLVDNM 288
                         ++G F            P    +N +IN LCK G+L  A  L   M
Sbjct: 332 AVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVM 391

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             +G  PN+VTY  LI G   +  LD A    ++M+         +Y ++IN   K G+ 
Sbjct: 392 AERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKM 451

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                +   M ++        Y++LISG  K+G    A KL+ +M  KG  PNTV ++AL
Sbjct: 452 KMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTAL 511

Query: 409 IDGLCRVGKPDEAE-----------------------------------EILFEMINNGC 433
           I GLC++ K  EA                                    E+L EMI  G 
Sbjct: 512 ICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL 571

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           + + +TY  L+ G   +G+  +A E   D+   +   +E+CY+ L+ G C++G+++EA +
Sbjct: 572 SPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALV 631

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
              +M+ RG + D+V+Y+ +I G  N        +L  EM       QPD   Y IL++ 
Sbjct: 632 ARQEMVGRGLQMDLVSYAVLISGALNQND-RILFELLREM--HGKGMQPDNVIYTILIDG 688

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
             K  N+  + +    M+  G  P+ VT    +  L +          ++NE A  LFKR
Sbjct: 689 FIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFK--------AGYVNE-AKLLFKR 739



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 209/464 (45%), Gaps = 39/464 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++ S+I      G  K  E++   M  +       ++  +   Y K  LV +A +L+H M
Sbjct: 437 SYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEM 496

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +     TV +F +++  + Q      A + ++ +V  K   ILPN +T+N++I+  CR
Sbjct: 497 TGKGIAPNTV-TFTALICGLCQINKMAEASKLFDEMVELK---ILPNEVTYNVLIEGHCR 552

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G    A +L  EM  +   PD YTY  L+ GLC   R+ EA   ++++         + 
Sbjct: 553 EGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELC 612

Query: 265 FNVLINGLCKNGEL-----------GRAAK-----------------------LVDNMFL 290
           +  L+ G CK G +           GR  +                       L+  M  
Sbjct: 613 YTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHG 672

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           KG  P+ V Y  LI G    GNL KA      M+    +PN VTY  ++NGL K G   +
Sbjct: 673 KGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNE 732

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +   M   +   N   Y   +  L KEG  E+A++L   M++ G   NTV Y+ LI 
Sbjct: 733 AKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIR 791

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G C++GK  EA ++L  MI  G   +  TYS+ +  + + G    A+++W+ M +     
Sbjct: 792 GYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKP 851

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           + V ++ LIH  C +G+L  A  +   M+ RG KP    Y S++
Sbjct: 852 DRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/396 (24%), Positives = 178/396 (44%), Gaps = 23/396 (5%)

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
           F +   F++LI    +N  +     +V+ M   G LP   T + L++ L       + + 
Sbjct: 152 FSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLE 211

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           L D +V +   P+   Y  ++  L +L        ++   E     ++   Y+  I+GL 
Sbjct: 212 LFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLC 271

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K  +  +A+++ + + EKG K + V Y  L+ GLCR+ + +   E++ EMI  G   +  
Sbjct: 272 KSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEA 331

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
             S L++G  + G    A E+   + K   V N   Y+ +I+ LC+ GKL EA ++++ M
Sbjct: 332 AVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVM 391

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
             RG  P+ V Y+ +I G      ++ A   FN+M  +E      V++YN ++N  CK  
Sbjct: 392 AERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKM--IECGISATVYSYNSMINCQCKFG 449

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            +  +  L   M+D+G  P + T    ++   +    P+                     
Sbjct: 450 KMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPK--------------------- 488

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            FK+   M  K ++P T T+  ++  LC+  ++  A
Sbjct: 489 AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEA 524



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 42/247 (17%)

Query: 139 RLFHTMVDEFHCKRTVKS---FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           R+   ++ E H K        +  +++  I+ G   +A EF+  ++   +   +PN++T+
Sbjct: 661 RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGY---VPNSVTY 717

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
             ++  + + G V+ A  LF+ M V    P+  TY   +D L KE  ++ A+ L + M +
Sbjct: 718 TALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM-L 776

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT------------- 302
            G F   VT+N+LI G C+ G+   AAKL+D M   G +P+ +TY+T             
Sbjct: 777 QGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDA 836

Query: 303 ----------------------LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
                                 LIH  CL G LD+A+ L + M+     P + TY +++ 
Sbjct: 837 AMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMV 896

Query: 341 GLVKLGR 347
            L +  R
Sbjct: 897 QLAQRAR 903



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 111/235 (47%), Gaps = 6/235 (2%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D+  Y+ LI  +  SG+ K      Y M  E  V    ++  +     KA  V EA  LF
Sbjct: 678 DNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLF 737

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M+        + ++   L+ + +EG    AL+ +N ++         NT+T+N++I+ 
Sbjct: 738 KRMLVGEAIPNHI-TYGCFLDHLTKEGNMENALQLHNAMLQGS----FANTVTYNILIRG 792

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C++G    A +L   M      PD  TY T +   CK   +D A+ + + M   G  P 
Sbjct: 793 YCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPD 852

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            V FN LI+  C NGEL RA +L ++M L+G  P + TY++L+  L  +  L + 
Sbjct: 853 RVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQV 907


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 247/546 (45%), Gaps = 58/546 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF      +GK    E+A ++ H M+       T  +++ V+  +        A   +  
Sbjct: 459 SFARCLCGFGK---FEKAYKVIHEMMGNGFVPDT-STYSEVIGFLCNASRVENAFFLFKE 514

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   K   ++P+  T+ ++I    + G++  A     EM    CEP + TY TL+    K
Sbjct: 515 M---KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD-----------NM 288
             ++  A  L + M   GCFP  +T+  LI+G CK+G + +A ++             +M
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDM 631

Query: 289 FLK-----GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           + K        PN VTY  L+ GLC    +  A  LL+ M    C PN + Y  +I+G  
Sbjct: 632 YFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K  +  +   V   M ER ++ N Y YS+LI  LFK+ + +  +K+  +M+E  C PN V
Sbjct: 692 KAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           +Y+ +IDGL +V K DEA +++  M   GC  N  TY++++ GF ++GK  K +E++++M
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREA--------RMVWTQMLSRGCK----------- 504
               C  N V Y+VLI+  C  G L EA        +  W + +S  CK           
Sbjct: 812 GSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL 871

Query: 505 --------------PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
                         P ++ Y  +I     AG +E AL+L  E++            Y  L
Sbjct: 872 SLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSL 931

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAI 608
           + +    S I H+ +L   M+  G  PDL T    L  L    + E     +D L ++ I
Sbjct: 932 IYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991

Query: 609 RLFKRQ 614
              +R+
Sbjct: 992 NWLRRE 997



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 211/467 (45%), Gaps = 33/467 (7%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG------LYHRALEFYNHI 180
           AY K+     A +L   M ++  CK     +N ++  I   G       +  A + YN +
Sbjct: 387 AYCKSDDFSYAYKLLKKM-EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEM 445

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           ++A  +    N ++F    + +C  G  + A ++  EM      PD  TY  ++  LC  
Sbjct: 446 LSAGTVLNKVNVVSF---ARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNA 502

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +R++ A  L  EM+  G  P   T+ +LI+   K G + +A   +D M   GC P  VTY
Sbjct: 503 SRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTY 562

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
            TLIH       +  A  L + M+A  C PN +TY  +I+G  K G      ++   M  
Sbjct: 563 TTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR- 621

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                              +    D    +K       KPN V Y AL+DGLC+  K  +
Sbjct: 622 ------------------GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A ++L  M  +GC  N   Y +L+ GF ++ K  +A E++  M +     N   YS LI 
Sbjct: 664 ARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLID 723

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            L +D +L     V ++ML   C P++V Y+ MI GL      +EA KL   ML +E K 
Sbjct: 724 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL---MLMMEEKG 780

Query: 541 -QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            +P+V TY  +++   K   +   ++L   M  +GC P+ VT  + +
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 226/526 (42%), Gaps = 80/526 (15%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           + +PNT+ +N +I  +C     + A+     M   +C P++ TY  L+ G   + +L   
Sbjct: 303 DFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRC 362

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             +L  M  +GC+P+   FN L++  CK+ +   A KL+  M    C P  V YN LI  
Sbjct: 363 KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS 422

Query: 307 LCLKGNL-----------------------------------------DKAVSLLDRMVA 325
           +C  G L                                         +KA  ++  M+ 
Sbjct: 423 ICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMG 482

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +  +P+  TY  +I  L    R  +   +   M+      + Y Y+ LI    K G  + 
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQ 542

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A     +M+  GC+P  V Y+ LI    +  K   A E+   MI  GC  N  TY++L+ 
Sbjct: 543 AHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALID 602

Query: 446 GFFESGKGHKAVEIWKDM--------------AKNNCVY--NEVCYSVLIHGLCEDGKLR 489
           G+ +SG   KA +I+  M               KNN     N V Y  L+ GLC+  K++
Sbjct: 603 GYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVK 662

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +AR +   M   GC+P+ + Y ++I G C A  ++EA ++F++M  +E    P+V+TY+ 
Sbjct: 663 DARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM--VERGYNPNVYTYSS 720

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L++ L K   +   + +L+ M++  C P++V                        E+   
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIV---------------------IYTEMIDG 759

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           L K  +T   +K++ +M +K   P   T+  ++    +  ++   +
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 239/503 (47%), Gaps = 56/503 (11%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           ST+  +I    N+   ++   +   M+    V    ++  +   + KA ++++A      
Sbjct: 490 STYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDE 549

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV +  C+ TV ++ ++++  ++      A E +  ++ AK     PN +T+  +I   C
Sbjct: 550 MVRD-GCEPTVVTYTTLIHAYLKAKKVSVANELFELMI-AK--GCFPNVITYTALIDGYC 605

Query: 204 RLGLVDNAIQLFREM-------------PVRNC---EPDIYTYCTLMDGLCKENRLDEAV 247
           + G ++ A Q++  M              ++N    +P++ TY  L+DGLCK +++ +A 
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LL+ M VDGC P  + ++ LI+G CK  +L  A ++   M  +G  PN  TY++LI  L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRL 725

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
                LD  + +L +M+ + C PN V Y  +I+GL K+ +  +  ++++ MEE+    N 
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ +I G  K GK +  ++L+++M  KGC PN V Y+ LI+  C  G  DEA  +L E
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845

Query: 428 MIN---------------------------------NGCAANAFTYSSLMKGFFESGKGH 454
           M                                   NG A     Y  L+  F ++G+  
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLE 905

Query: 455 KAVEIWKDM--AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            A+E+ K++  A  +    +  Y+ LI+      K+  A  ++  M+  G  PD+  +  
Sbjct: 906 VALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDLGTFVH 965

Query: 513 MIHGLCNAGSVEEALKLFNEMLC 535
           ++ GL      EEAL+L ++ LC
Sbjct: 966 LLMGLIRVRRWEEALQL-SDSLC 987



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 253/598 (42%), Gaps = 115/598 (19%)

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           + + G Y R  E +   +      +L   L  N++I+  CR GL + A++    +     
Sbjct: 180 VFERGSYDRVPEEFLREIRGDDKEVLGKLL--NVLIRKCCRNGLWNVALEELGRLKDFGY 237

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
           +P   TY  L+    + ++LD A L+  EM   G      T       LCK G+   A  
Sbjct: 238 KPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALS 297

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           L++    +  +PN + YN +I GLC     ++A+  L+RM ++ C+PN  TY  ++ G +
Sbjct: 298 LIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCL 354

Query: 344 ---KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
              +LGR     R+L  M     + +  I+++L+    K      A KL K+M +  CKP
Sbjct: 355 NKKQLGRC---KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKP 411

Query: 401 NTVVYSALIDG-----------------------------------------LCRVGKPD 419
             VVY+ LI                                           LC  GK +
Sbjct: 412 GYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFE 471

Query: 420 EAEEILFEMINNG---------------CAA----NAF----------------TYSSLM 444
           +A +++ EM+ NG               C A    NAF                TY+ L+
Sbjct: 472 KAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILI 531

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             F ++G   +A     +M ++ C    V Y+ LIH   +  K+  A  ++  M+++GC 
Sbjct: 532 DCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCF 591

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM----------LCLEPKS----QPDVFTYNIL 550
           P+V+ Y+++I G C +G++E+A +++  M          +  + K+    +P+V TY  L
Sbjct: 592 PNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGAL 651

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNE--- 605
           ++ LCK   +  + DLL +M   GC+P+ +  +  +       KL+  Q+    + E   
Sbjct: 652 VDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGY 711

Query: 606 ---------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    L  RLFK +R     K++  ML+   +P    +  ++  L +  +   A
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEA 769


>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 152/523 (29%), Positives = 259/523 (49%), Gaps = 6/523 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           + F    K   +Q   +T+ +LI+    SG    +   +  M R    V    +  I K 
Sbjct: 109 QFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKI 168

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
            GKA +V +A+ +F+ +     C  T   +N+++ +++ EG + +  E YN I +    N
Sbjct: 169 LGKAKMVNKALSVFYQIKGR-KCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEG--N 225

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             P+T+T++ +I    +L   D A +LF EM      P    Y T++    K N+++ A+
Sbjct: 226 CSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAAL 285

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L++EM+  GC PT  T+  LI GL K G +  A  L  NM   GC P+ V  N LI+ L
Sbjct: 286 RLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINIL 345

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHVN 366
              G L+ A+ L  +M + +C PN VTY T+I  + +    A + A     M+      +
Sbjct: 346 GRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPS 405

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + Y+ LI G  K  + E A+ L ++M EKG  P    Y +LID L R  + + A E+  
Sbjct: 406 SFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQ 465

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E+  N   ++A  Y+ ++K F   G+   AV+++ +M K  C  +   Y+ L+ G+   G
Sbjct: 466 ELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAG 525

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            + EA  +   M   GC PD+ +++ +++GL   G  + A+++F +M   E +  PD  +
Sbjct: 526 MIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK--ESEIMPDAVS 583

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           YN +L+ L +      +  L+  M  +G + D +T +  L A+
Sbjct: 584 YNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV 626



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 158/337 (46%), Gaps = 43/337 (12%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + K  GK   V++A  LF  M+ +  CK  V   N+++N++ + G    AL+ +  
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNLINILGRAGRLEDALKLFGK 360

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRL-GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
           +     +   PN +T+N VIK +         A   F +M      P  +TY  L+DG C
Sbjct: 361 M---DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFC 417

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN----------------------- 275
           K NR+++A+LLL+EM   G  P P  +  LI+ L +                        
Sbjct: 418 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSAR 477

Query: 276 ---------GELGRAAKLVD---NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
                    G  GR +  VD    M   GC P+  TYN L+ G+   G +D+A SL+  M
Sbjct: 478 VYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRNM 537

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             + C P+  ++  I+NGL K G       +   M+E +   +   Y+T++S L + G  
Sbjct: 538 RENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGMF 597

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           E A KL ++M  KG + +++ YS++++    VGK DE
Sbjct: 598 EMAAKLMREMKLKGFEYDSITYSSILEA---VGKVDE 631



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 149/341 (43%), Gaps = 20/341 (5%)

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           +  TY  +I  L + G   +  R +  M      V    +S ++  L K      A+ ++
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVF 182

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGFFE 449
            Q+  + C P   VY+ LI  L   G  ++  E+  E+ + G C+ +  TYS+L+  F +
Sbjct: 183 YQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGK 242

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
             +   A  ++ +M +N     E  Y+ ++    +  K+  A  +  +M  +GC P V  
Sbjct: 243 LERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFT 302

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ +I GL   G V++A  LF  ML  +   +PDV   N L+N L +   +  ++ L   
Sbjct: 303 YTELIKGLGKVGRVDDAYSLFFNML--KDGCKPDVVLINNLINILGRAGRLEDALKLFGK 360

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQD---------------GTDFLNELAIRLF-KR 613
           M    C P++VT N  + A+ E  +AP                  + F   + I  F K 
Sbjct: 361 MDSLQCAPNVVTYNTVIKAIFES-KAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKT 419

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            R      ++E M +K   P  + +  ++  L R KR +AA
Sbjct: 420 NRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAA 460


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  231 bits (590), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 255/519 (49%), Gaps = 13/519 (2%)

Query: 73  TPKLGSYQLGDSTFYSL--IQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGK 130
           TP L +Y +    F  +  ++H      F +  ++L    R   +V+ +    + K    
Sbjct: 91  TPDLCTYSILIGCFCRMGRLEH-----GFATFGLILKSGWRVNNIVINQ----LLKGLCD 141

Query: 131 AHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
           A  + EA+ +    + E  C   V S+N++L     E     ALE  + + +++  +  P
Sbjct: 142 AKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPP 201

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N +++  VI      G VD A  LF EM  R  +P++ TY T++DGLCK   +D A  + 
Sbjct: 202 NVVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVF 261

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M   G  P   T+N LI+G    G+     ++++ M   G  P+  TY +L++ LC  
Sbjct: 262 QQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNN 321

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G   +A    D M+     PN   YG +I+G    G   +   +L  M E     + +I+
Sbjct: 322 GRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + + +   K+   ++AM ++ +M ++G  P+ V + ALID LC++G+ D+A     +M+N
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G A N F ++SL+ G     K  KA E + +M       + V ++ ++  LC  G++ +
Sbjct: 442 EGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMK 501

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A+ +   M   G +PDV++Y+++I G C  G ++EA K  + ML +  K  PD +TYN L
Sbjct: 502 AQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLK--PDEWTYNTL 559

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           L+  C+   I  +  +   M+  G  P +VT +  L  L
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGL 598



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 146/507 (28%), Positives = 231/507 (45%), Gaps = 42/507 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDE--FHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           S+  + K +      EEA+ L H M D     C   V S+ +V+N    EG   +A   Y
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKA---Y 223

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           N  +      I PN +T+  VI  +C+  +VD A  +F++M  +  +PD  TY  L+ G 
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
               +  E V +L+EM   G  P   T+  L+N LC NG    A    D+M  KG  PN 
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNV 343

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
             Y  LIHG   KG L +   LL+ MV +   P+   +  I     K     +   +   
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M+++    +   +  LI  L K G+ +DA+  + QMM +G  PN  V+++L+ GLC V K
Sbjct: 404 MKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463

Query: 418 PDEAEEILFEMINNG-----------------------------------CAANAFTYSS 442
            ++A+E  FEM+N G                                      +  +Y++
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G    G+  +A +    M       +E  Y+ L+HG C  G++ +A  V+ +ML  G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P VV YS+++HGL       EA +L+  M  +    Q +++ YNI+LN L K + +  
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNM--ITSGKQWNIWIYNIILNGLSKNNCVDE 641

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +  L  S+  +    ++ T NI + AL
Sbjct: 642 AFKLFQSLCSKDFQLEITTFNIMIGAL 668



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 143/548 (26%), Positives = 254/548 (46%), Gaps = 32/548 (5%)

Query: 134 VEEAIRLFHTMVDEFHCK-RTVKSFNSVLNVIIQ-EGLYHRALE------FYNHIVNAKH 185
           +++A++LF  ++   H +  ++ +FN +L  + +  G      E       +N ++    
Sbjct: 30  LDDALKLFDGLLT--HARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECT 87

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P+  T++++I   CR+G +++    F  +       +      L+ GLC   RL E
Sbjct: 88  IKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLRE 147

Query: 246 AV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF---LKGCLPNEVTYN 301
           A+ +L+  M   GC P  V++N L+ G C       A +L+  M     + C PN V+Y 
Sbjct: 148 AMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEE 360
           T+I+G   +G +DKA +L   M+     PN VTY T+I+GL K  + VD A  V   M +
Sbjct: 208 TVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK-AQVVDRAEGVFQQMID 266

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    +   Y+ LI G    GK ++ +++ ++M   G KP+   Y +L++ LC  G+  E
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A      MI  G   N   Y  L+ G+   G   +  ++   M +N    +   ++++  
Sbjct: 327 ARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFT 386

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
              +   + EA  ++ +M  +G  PDVV + ++I  LC  G V++A+  FN+M+      
Sbjct: 387 AYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM--NEGV 444

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQD 598
            P++F +N L+  LC       + +    M+++G  PD+V  N  L  L  K ++   Q 
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504

Query: 599 GTDFLNELAIR--LFKRQRTSGGF----------KIVEVMLQKFLSPQTSTWERVVQELC 646
             D +  +  R  +       GG           K ++VML   L P   T+  ++   C
Sbjct: 505 LIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564

Query: 647 RPKRIQAA 654
           R  RI  A
Sbjct: 565 RAGRIDDA 572



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 221/456 (48%), Gaps = 21/456 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++  + ++  ++  +  K  +   + +LN++++ GL                    P+  
Sbjct: 339 IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLS-------------------PDHH 379

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            FN++     +  ++D A+ +F +M  +   PD+  +  L+D LCK  R+D+AVL  ++M
Sbjct: 380 IFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQM 439

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P    FN L+ GLC   +  +A +    M  +G  P+ V +NT++  LC KG +
Sbjct: 440 MNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQV 499

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            KA  L+D M      P+ ++Y T+I G   +GR  + A+ L  M       +E+ Y+TL
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTL 559

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + G  + G+ +DA  ++++M+  G  P  V YS ++ GL    +  EA+E+   MI +G 
Sbjct: 560 LHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGK 619

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N + Y+ ++ G  ++    +A ++++ +   +       ++++I  L + G+  +A  
Sbjct: 620 QWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMH 679

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  + S G  PDV  Y  +   L   G +EE   LF+ M   +  + P+    N L+  
Sbjct: 680 LFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAM--EKSGTTPNSRMLNALVRR 737

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           L  + +I+ +   L+ + ++    +  T  + ++ L
Sbjct: 738 LLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLL 773



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 196/431 (45%), Gaps = 41/431 (9%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR-----AAKLVDNMF---LKGCL 294
           LD+A+ L D +       + + FN L+  + +    GR      ++LV ++F   ++ C 
Sbjct: 30  LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVS--GRRSSTTESELVVSLFNRMIRECT 87

Query: 295 ----PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
               P+  TY+ LI   C  G L+   +    ++ S    N +    ++ GL    R  +
Sbjct: 88  IKVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLRE 147

Query: 351 GARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME---KGCKPNTVVYS 406
              +L+  M E     +   Y+TL+ G   E +AE+A++L   M +   + C PN V Y+
Sbjct: 148 AMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            +I+G    G+ D+A  +  EM++ G   N  TY++++ G  ++    +A  +++ M   
Sbjct: 208 TVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               +   Y+ LIHG    GK +E   +  +M + G KPD   Y S+++ LCN G   EA
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
              F+ M+      +P+V  Y IL++    +  +S   DLLN M++ G  PD    NI  
Sbjct: 328 RFFFDSMI--RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
           TA  +K    +         A+ +F + +  G            LSP    +  ++  LC
Sbjct: 386 TAYAKKAMIDE---------AMHIFNKMKQQG------------LSPDVVNFGALIDALC 424

Query: 647 RPKRIQAAINK 657
           +  R+  A+ K
Sbjct: 425 KLGRVDDAVLK 435



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 181/432 (41%), Gaps = 39/432 (9%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM---- 144
           LI  YA  G    +  +L  M           F  IF AY K  +++EA+ +F+ M    
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408

Query: 145 -----------VDEFHCK-----RTVKSFNSVLNVIIQEGLY---------------HRA 173
                      +D   CK       V  FN ++N  +   ++                +A
Sbjct: 409 LSPDVVNFGALIDAL-CKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA 467

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
            EFY  ++N     I P+ + FN ++  +C  G V  A +L   M      PD+ +Y TL
Sbjct: 468 KEFYFEMLN---QGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTL 524

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           + G C   R+DEA   LD M   G  P   T+N L++G C+ G +  A  +   M   G 
Sbjct: 525 IGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGI 584

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            P  VTY+T++HGL       +A  L   M+ S    N   Y  I+NGL K     +  +
Sbjct: 585 TPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFK 644

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +  S+  + F +    ++ +I  LFK G+ EDAM L+  +   G  P+   Y  + + L 
Sbjct: 645 LFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLI 704

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
             G  +E +++   M  +G   N+   ++L++     G   +A      + + N      
Sbjct: 705 EEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEAS 764

Query: 474 CYSVLIHGLCED 485
             ++LI  L  D
Sbjct: 765 TTAMLISLLSRD 776


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 248/489 (50%), Gaps = 7/489 (1%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SLI+    S D   + +V + ++    ++ E +   + K++G   LVEE + ++  M  E
Sbjct: 153 SLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRM-KE 211

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
                ++ ++N ++N ++       A + +  +   K   I+P+T+T+N++IK  C+ G 
Sbjct: 212 NGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGK---IVPDTVTYNIMIKGYCKAGK 268

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +  A++ FR+M ++N +PD  TY TL+     E   D  + L  EM+  G    P ++++
Sbjct: 269 LQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSL 328

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           +I GLCK  +   A  + + M  KGC  N   Y  LI      G++++A+ L +RM    
Sbjct: 329 VIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEG 388

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+ VTY  ++NGL K GR  DG  +      +   +N   Y++LI GL K G+ EDA 
Sbjct: 389 FEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAE 448

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+++M EKGC  ++  Y+A+ID L + GK D+A  +   M   GC    +T++ L+ G 
Sbjct: 449 NLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGL 508

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
           F+  K  +A++ W  M           +  L  GLC  GK+  A  +   +   G  P+ 
Sbjct: 509 FKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPE- 567

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
            A+  MI+ LC A  ++EA KL + ++    +    + T  +L+NAL K  N    I L+
Sbjct: 568 TAFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRT--VLINALRKAGNSDLVIKLM 625

Query: 568 NSMMDRGCD 576
           +S +  G D
Sbjct: 626 HSKIGIGYD 634



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 194/423 (45%), Gaps = 29/423 (6%)

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV- 285
           I  + +L++ L     L +  L+  E++  G   T    N LI      G LG   +L+ 
Sbjct: 148 IECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSF---GNLGLVEELLW 204

Query: 286 --DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
               M   G  P+  TYN L++GL     ++ A  + + M   K +P+ VTY  +I G  
Sbjct: 205 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 264

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K G+          ME +    ++  Y TLI   + E   +  + L+ +M E+G +    
Sbjct: 265 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 324

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            YS +I GLC+  K  EA  +   M   GC AN   Y++L+  + ++G   +A+ +++ M
Sbjct: 325 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 384

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
                  + V YSVL++GLC+ G+L +   ++    ++G   + + Y+S+I GL  AG +
Sbjct: 385 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRI 444

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           E+A  LF EM   E     D + YN +++AL K   I  ++ L   M + GCD  + T  
Sbjct: 445 EDAENLFEEMS--EKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFT 502

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           I +           DG          LFK  +     K  + M+ K ++P  +++  +  
Sbjct: 503 ILI-----------DG----------LFKEHKNEEAIKFWDKMIDKGITPTVASFRALAI 541

Query: 644 ELC 646
            LC
Sbjct: 542 GLC 544



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 40/340 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LIQ   +  DF +   +   M      +   S+  +     K     EA  +F TM
Sbjct: 290 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETM 349

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++  C+  V  + ++++   + G    A+  +  +   K+    P+ +T+++++  +C+
Sbjct: 350 -NQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM---KNEGFEPDAVTYSVLVNGLCK 405

Query: 205 LGLVDNAIQ-----------------------------------LFREMPVRNCEPDIYT 229
            G +D+ ++                                   LF EM  + C  D Y 
Sbjct: 406 SGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYC 465

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  ++D L K  ++D+A+ L   M+ +GC  T  TF +LI+GL K  +   A K  D M 
Sbjct: 466 YNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMI 525

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            KG  P   ++  L  GLCL G + +A  +LD +     +P E  +  +IN L K  R  
Sbjct: 526 DKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQRIK 584

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           +  ++   + +R   +   I + LI+ L K G ++  +KL
Sbjct: 585 EACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKL 624


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 208/384 (54%), Gaps = 3/384 (0%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           + A  L+ EM VR    D Y+ C ++ GLC E R++E   L++    +GC P  V +NVL
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+G C+ G++GR   L+  M  KG +P  VTY  +IH L  KG+L K  SLL  M A   
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            PN   Y T+IN L K   A   + +L  M + +F+ +   ++T+I+G  +EG   +A+K
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L ++ + +G +PN + Y+ LI G C  G+   A ++L EM+  G   +  T  +L+ G  
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            SG+ + A+ + + MA+   + +   Y+VLI GLC+   L  A+ +  +ML +  +PD  
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKF 362

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+++I G   +  + +A K+F  M   E K+ PD+  YN+++   CK   +  ++  ++
Sbjct: 363 IYTTLIDGFVRSDKLSDARKIFEFM---EEKACPDIVAYNVMIKGYCKFGMMKEAVTCMS 419

Query: 569 SMMDRGCDPDLVTCNIFLTALKEK 592
           SM   GC PD  T    +    +K
Sbjct: 420 SMRKAGCIPDEFTYTTLVDGYAKK 443



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 226/473 (47%), Gaps = 15/473 (3%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I+P  +T+  +I  + R G +     L  EM  R   P++  Y T+++ LCK     +A
Sbjct: 146 GIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQA 205

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             +L++M      P  VTFN +I G C+ G++  A KL+     +G  PN+++Y  LIHG
Sbjct: 206 SDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHG 265

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C++G    A  LL  M+     P+ +T G +I+GLV  G+  D   V   M ER+   +
Sbjct: 266 FCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPD 325

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             IY+ LISGL K+     A  L ++M+E+  +P+  +Y+ LIDG  R  K  +A +I F
Sbjct: 326 ANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKI-F 384

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E +      +   Y+ ++KG+ + G   +AV     M K  C+ +E  Y+ L+ G  + G
Sbjct: 385 EFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKG 444

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PD 543
            +  +  +   M+ R CKP++  Y+S+I G CN G    A  LF +M     +S+   P+
Sbjct: 445 DISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKM-----QSEGLFPN 499

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
           V  Y +L+ +L K+  +  +      M+   C P+  T +  +  L             +
Sbjct: 500 VVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHG------MV 553

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           N       +    S    +   ++   L P+ S +  ++  LCR   +  A++
Sbjct: 554 NSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMD 606



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 211/458 (46%), Gaps = 52/458 (11%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN   +N VI  +C+      A  +  +M      PD+ T+ T++ G C+E  + EA+ L
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L E    G  P  +++  LI+G C  GE   A+ L+  M  +G  P+ +T   LIHGL +
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVV 303

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G ++ A+ + ++M   + MP+   Y  +I+GL K         +L  M E+K   +++I
Sbjct: 304 SGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFI 363

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI G  +  K  DA K+++ M EK C P+ V Y+ +I G C+ G   EA   +  M 
Sbjct: 364 YTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMR 422

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             GC  + FTY++L+ G+ + G    ++ +  DM K  C  N   Y+ LI G C  G   
Sbjct: 423 KAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTY 482

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--------------- 534
            A  ++ +M S G  P+VV Y+ +I  L     V +A   F  ML               
Sbjct: 483 SAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLV 542

Query: 535 --------------------CLEPKSQPDVF-------------TYNILLNALCKQSNIS 561
                                 E  +  DVF              YN ++ +LC+ + + 
Sbjct: 543 NGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLG 602

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            ++DL + M ++GC PD +T   FL+ L     A + G
Sbjct: 603 KAMDLKDKMSNKGCLPDPIT---FLSLLYGFSSAGESG 637



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 131/523 (25%), Positives = 222/523 (42%), Gaps = 89/523 (17%)

Query: 84  STFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + FY+ LI  Y   GD     ++L  M  +  +    ++  I    G+   + +   L  
Sbjct: 116 AVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLG 175

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M         V+ +N+V+N + +     +A +  N +V ++     P+ +TFN +I   
Sbjct: 176 EMRAR-GLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFN---PDVVTFNTMIAGF 231

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CR G V  A++L RE   R  EP+  +Y  L+ G C       A  LL EM   G  P  
Sbjct: 232 CREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDM 291

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +T   LI+GL  +G++  A  + + M  +  +P+   YN LI GLC K  L  A +LL+ 
Sbjct: 292 ITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEE 351

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER----------------KFHV- 365
           M+  K  P++  Y T+I+G V+  +  D  ++   MEE+                KF + 
Sbjct: 352 MLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACPDIVAYNVMIKGYCKFGMM 411

Query: 366 -----------------NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                            +E+ Y+TL+ G  K+G    +++L   MM++ CKPN   Y++L
Sbjct: 412 KEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASL 471

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I G C +G    AE++  +M + G   N   Y+ L+   F+  K  +A   ++ M  N+C
Sbjct: 472 ICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHC 531

Query: 469 VYNEV--------------------------------------------------CYSVL 478
             N+                                                    Y+ +
Sbjct: 532 PPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAI 591

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           I  LC    L +A  +  +M ++GC PD + + S+++G  +AG
Sbjct: 592 IFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSSAG 634



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 188/437 (43%), Gaps = 69/437 (15%)

Query: 85  TFYSLIQHYANSGDFK-SLEMVLYRMRR--EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF ++I  +   GD + +L+++   +RR  E   +     I  F   G+A +  +   L 
Sbjct: 223 TFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASD---LL 279

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK--HMNILPNTLTFNLVI 199
             M+   H    + +  ++++ ++  G  + AL     IV  K     ++P+   +N++I
Sbjct: 280 VEMMGRGHTPDMI-TLGALIHGLVVSGQVNDAL-----IVREKMAERQVMPDANIYNVLI 333

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C+  ++  A  L  EM  +  +PD + Y TL+DG  + ++L +A  + + M+   C 
Sbjct: 334 SGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC- 392

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  V +NV+I G CK G +  A   + +M   GC+P+E TY TL+ G   KG++  ++ L
Sbjct: 393 PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRL 452

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  M+  +C PN  TY ++I G   +G       +   M+      N   Y+ LI  LFK
Sbjct: 453 LCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFK 512

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTV------------------------------------ 403
           + K   A   ++ M+   C PN                                      
Sbjct: 513 KDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDV 572

Query: 404 --------------VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
                          Y+A+I  LCR     +A ++  +M N GC  +  T+ SL+ GF  
Sbjct: 573 FRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFSS 632

Query: 450 SGKGHKAVEIWKDMAKN 466
           +G+  K    W+    N
Sbjct: 633 AGESGK----WRSALPN 645



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 25/223 (11%)

Query: 85  TFYSLIQHYANSGDFK-SLEMVLYRMRR--EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +L+  YA  GD   SL ++   M+R  +  +    S I  +   G  +  E+   LF
Sbjct: 432 TYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAED---LF 488

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  E      V     + ++  ++ +   A  F + ++N    +  PN  T + ++  
Sbjct: 489 AKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLN----HCPPNDATVHYLVNG 544

Query: 202 V--CRLGLVDN-------------AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           +  CR G+V++              + +FR +     +P I  Y  ++  LC+ N L +A
Sbjct: 545 LVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKA 604

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           + L D+M   GC P P+TF  L+ G    GE G+    + N F
Sbjct: 605 MDLKDKMSNKGCLPDPITFLSLLYGFSSAGESGKWRSALPNEF 647


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 129/472 (27%), Positives = 243/472 (51%), Gaps = 7/472 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRT--VKSFNSVLNVIIQEGLYHRALEFY 177
           S+  + K +      EEA+ L   M D+     T  V ++ +V++ + +  +  RA   +
Sbjct: 166 SYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVF 225

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
            H+++     + PN  T+  +I     +G     +Q+ +EM     +PD Y Y  L+D L
Sbjct: 226 QHMIDK---GVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYL 282

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CK  R  EA  + D +   G  P    + +L++G    G L      +D M   G  P+ 
Sbjct: 283 CKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDH 342

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
             +N +      K  +D+A+ + D+M   +  PN VTYG +I+ L KLGR  D       
Sbjct: 343 HIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQ 402

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M +     + +++S+L+ GL    K E A +L+ +++++G + +TV ++ L+  LCR G+
Sbjct: 403 MIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGR 462

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             EA+ ++  M+  G   +  +Y++L+ G   +G+  +A ++   +       ++V Y+ 
Sbjct: 463 VMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNT 522

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           L+HG C+  ++ +A  ++ +ML +G  PDVV Y++++HGL   G   EA +L+  M+   
Sbjct: 523 LLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI--N 580

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++Q +++TYNI++N LCK + +  +  + +S+  +    D+ T NI + AL
Sbjct: 581 SRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGAL 632



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 142/575 (24%), Positives = 266/575 (46%), Gaps = 33/575 (5%)

Query: 109 MRREKRVV------LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK-RTVKSFNSVL 161
           M R +RV       LE   +   +A+  +  + +A++LF  M+   H +  +V++FN +L
Sbjct: 1   MSRSRRVTAAADRCLELERVIADRAHSGSLGLNDALKLFDEMLT--HARPASVRAFNQLL 58

Query: 162 NVIIQ---EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
             + +          +  +N ++    + + P++ T+ ++I   CR+G + +    F  +
Sbjct: 59  TAVSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLI 118

Query: 219 PVRNCEP-DIYTYCTLMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
                   D   +  L+ GLC   R+DEA  +LL  M   GC P   ++++L+ G C   
Sbjct: 119 LKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEK 178

Query: 277 ELGRAAKLVDNMFLKG---CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
               A +L+  M   G     PN VTY T+I GLC    +D+A  +   M+     PN  
Sbjct: 179 RAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNH 238

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+G + +G+  +  ++L  M       + YIY+ L+  L K G+  +A  ++  +
Sbjct: 239 TYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSV 298

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + KG KPN  +Y  L+ G    G   E    L  M+ NG + +   ++ +   + +    
Sbjct: 299 IRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMI 358

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ I+  M +     N V Y  LI  LC+ G++ +A + + QM+  G  PD+  +SS+
Sbjct: 359 DEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSL 418

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           ++GLC     E+A +LF E+  L+   + D   +N L+  LC++  +  +  L++ M+  
Sbjct: 419 VYGLCTVDKWEKAEELFFEV--LDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRV 476

Query: 574 GCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIR------------LFKRQRTSGG 619
           G  PD+++ N  +    L  +++      D +  + ++              K +R    
Sbjct: 477 GVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDA 536

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           + +   ML K L+P   T+  ++  L +  R   A
Sbjct: 537 YSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEA 571



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 212/459 (46%), Gaps = 42/459 (9%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQH-YANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           IF+S  + G     + T Y ++ H YA  G    +   L  M           F  +F A
Sbjct: 294 IFDSVIRKGIKP--NVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCA 351

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y K  +++EA+ +F  M                                       +   
Sbjct: 352 YAKKAMIDEAMHIFDKM---------------------------------------RQQR 372

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           + PN +T+  +I  +C+LG VD+A+  F +M      PDI+ + +L+ GLC  ++ ++A 
Sbjct: 373 LSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAE 432

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L  E+   G     V FN L+  LC+ G +  A +L+D M   G  P+ ++YNTL+ G 
Sbjct: 433 ELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGH 492

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           CL G +D+A  LLD +V+    P++VTY T+++G  K  R  D   +   M  +    + 
Sbjct: 493 CLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDV 552

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+T++ GLF+ G+  +A +L+  M+    + N   Y+ +I+GLC+    DEA ++   
Sbjct: 553 VTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHS 612

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           + +     + FT + ++    + G+   A++++  ++    V +   Y ++   L ++G 
Sbjct: 613 LCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGS 672

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
           L E   +++ M   G  P+    ++++  L + G +  A
Sbjct: 673 LEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRA 711



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 251/525 (47%), Gaps = 18/525 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  Y + G +K +  +L  M           +  +     K     EA  +F ++
Sbjct: 239 TYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSV 298

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +   K  V  +  +L+    EG       F + +V      + P+   FN++     +
Sbjct: 299 IRK-GIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGN---GVSPDHHIFNIMFCAYAK 354

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
             ++D A+ +F +M  +   P+I TY  L+D LCK  R+D+AVL  ++M  +G  P    
Sbjct: 355 KAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFV 414

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           F+ L+ GLC   +  +A +L   +  +G   + V +NTL+  LC +G + +A  L+D M+
Sbjct: 415 FSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLML 474

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ ++Y T+++G    GR  + A++L  +       ++  Y+TL+ G  K  + +
Sbjct: 475 RVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRID 534

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA  L+++M+ KG  P+ V Y+ ++ GL + G+  EA+E+   MIN+    N +TY+ ++
Sbjct: 535 DAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIII 594

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++    +A +++  +   +   +    +++I  L + G+  +A  ++  + + G  
Sbjct: 595 NGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLV 654

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PDV  Y  +   L   GS+EE  +LF+ M   E  + P+    N L+  L  + +I+ + 
Sbjct: 655 PDVETYCLIAENLIKEGSLEELDELFSAM--EENGTAPNSRMLNALVRWLLHRGDINRAG 712

Query: 565 DLLNSMMDRGCDPDLVTCNIFLT------------ALKEKLEAPQ 597
             L+ + ++    +  T ++ ++            +L EK   PQ
Sbjct: 713 AYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSLPEKYHFPQ 757



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 180/397 (45%), Gaps = 38/397 (9%)

Query: 275 NGELG--RAAKLVDNMFLKGCLPNEVTYNTLIHGL----CLKGNLDKAVSLLDRMV---A 325
           +G LG   A KL D M       +   +N L+  +    C   + +  VSL +RM+   +
Sbjct: 27  SGSLGLNDALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSAS-ELVVSLFNRMIRECS 85

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE-YIYSTLISGLFKEGKAE 384
            K  P+  TY  +I    ++GR   G      + +  + VN+  I+S L+ GL    + +
Sbjct: 86  IKVAPSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVD 145

Query: 385 DAMK-LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA---NAFTY 440
           +A   L ++M E GC P+   YS L+ G C   + +EA E+L  M ++G  +   N  TY
Sbjct: 146 EATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTY 205

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++++ G  ++    +A  +++ M       N   Y+ LIHG    GK +E   +  +M +
Sbjct: 206 TTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMST 265

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G +PD   Y+ ++  LC  G   EA  +F+ ++      +P+V  Y ILL+    + ++
Sbjct: 266 HGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVI--RKGIKPNVTIYGILLHGYATEGSL 323

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
           S     L+ M+  G  PD    NI   A  +K    +         A+ +F + R     
Sbjct: 324 SEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDE---------AMHIFDKMR----- 369

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
                  Q+ LSP   T+  ++  LC+  R+  A+ K
Sbjct: 370 -------QQRLSPNIVTYGALIDALCKLGRVDDAVLK 399


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 236/461 (51%), Gaps = 6/461 (1%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F ++ K+    +  +EA   F+TM  E     T+++ NS+L++ ++      A   Y  +
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTM-KEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
                + I  +  TFN++I  +C+ G +  A      M     +P+I TY T++ G C  
Sbjct: 213 F---RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            R++ A  +L  M+     P   T+  LI+G+CK G L  A+K+ + M  KG  P+ V Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTLI G C KGNLD A +  D M+     P   TY ++I+ L    R  +   ++  ++E
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    +   Y+ LI+G  +   A+ A  L  +M+  G KP    Y++L+  L +  +  E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A+++  ++ + G   +   +++L+ G   +     A E+ KDM +     +EV ++ ++ 
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C +GK+ EAR ++ +M  RG KPD ++++++I G    G +++A ++ NEM  L+   
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM--LDTGF 567

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            P V TYN L+  LCK      + +LL  M+ +G  PD  T
Sbjct: 568 NPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTT 608



 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 228/457 (49%), Gaps = 23/457 (5%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +++ F+ +IK+ C +   D A + F  M  +   P I T  +L+    K NR + A +L 
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM       +  TFN++IN LCK G+L +A   V +M   G  PN VTYNT++HG C  
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G ++ A ++L  M   K  P+  TYG++I+G+ K GR  + +++   M ++    +  IY
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI G   +G  + A     +M++KG  P    Y++LI  L    + DEAE ++ E+  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G + +A TY+ L+ G+       KA  +  +M  +     +  Y+ L+H L +  +++E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++ ++ S G  PDV+ ++++I G C+  +V+ A +L  +M  +  K  PD  T+N +
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRM--KVPPDEVTFNTI 507

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +   C++  +  + +L + M  RG  PD ++ N  ++                       
Sbjct: 508 MQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYS-------------------- 547

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            +R      F++   ML    +P   T+  +VQ LC+
Sbjct: 548 -RRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCK 583



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 197/425 (46%), Gaps = 38/425 (8%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA  + +  +     K +V +FN ++NV+ +EG   +A +F  H+  +    + PN +T+
Sbjct: 203 EAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETS---GVKPNIVTY 259

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N ++   C  G V+ A  +   M  +  EPD +TY +L+ G+CK+ RL+EA  + +EM  
Sbjct: 260 NTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG----------------------- 292
            G  P+ V +N LI+G C  G L  A+   D M  KG                       
Sbjct: 320 KGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDE 379

Query: 293 --CL----------PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
             C+          P+ +TYN LI+G C   N  KA  L D M+AS   P + TY ++++
Sbjct: 380 AECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLH 439

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
            L K  R  +   +   +       +  +++ LI G       + A +L K M      P
Sbjct: 440 VLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPP 499

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           + V ++ ++ G CR GK +EA E+  EM   G   +  ++++L+ G+   G    A  + 
Sbjct: 500 DEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVR 559

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
            +M         + Y+ L+ GLC++ +   A  +  +M+S+G  PD   Y ++I G+   
Sbjct: 560 NEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKV 619

Query: 521 GSVEE 525
              +E
Sbjct: 620 NIPDE 624



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 184/365 (50%), Gaps = 8/365 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ +++  Y +SG  ++ + +L  M+R+K  +   SF +  +     K   +EEA ++F 
Sbjct: 258 TYNTIVHGYCSSGRVEAADAILTTMKRQK--IEPDSFTYGSLISGMCKQGRLEEASKIFE 315

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV +   + +   +N++++    +G    A  + + ++      I P   T+N +I  +
Sbjct: 316 EMVQK-GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK---GISPTMSTYNSLIHAL 371

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
                 D A  + +E+  +   PD  TY  L++G C+     +A LL DEM   G  PT 
Sbjct: 372 FMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTK 431

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+  L++ L K   +  A  L   +  +G LP+ + +N LI G C   N+  A  LL  
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKD 491

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M   K  P+EVT+ TI+ G  + G+  +   +   M+ R    +   ++TLISG  + G 
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGD 551

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +DA ++  +M++ G  P  + Y+AL+ GLC+  + D AEE+L EM++ G   +  TY +
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611

Query: 443 LMKGF 447
           L++G 
Sbjct: 612 LIEGI 616



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 174/422 (41%), Gaps = 58/422 (13%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C  NR DEA      M+  G  PT  T N L++   K      A  L   MF   
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              +  T+N +I+ LC +G L KA   +  M  S   PN VT                  
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVT------------------ 258

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
                            Y+T++ G    G+ E A  +   M  +  +P++  Y +LI G+
Sbjct: 259 -----------------YNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGM 301

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G+ +EA +I  EM+  G   +A  Y++L+ GF   G    A     +M K       
Sbjct: 302 CKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTM 361

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y+ LIH L  + +  EA  +  ++  +G  PD + Y+ +I+G C   + ++A  L +E
Sbjct: 362 STYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDE 421

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           ML    K  P   TY  LL+ L K++ +  + DL   +   G  PD++  N  +      
Sbjct: 422 MLASGIK--PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALI------ 473

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                DG                  G F++++ M +  + P   T+  ++Q  CR  +++
Sbjct: 474 -----DGH----------CSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518

Query: 653 AA 654
            A
Sbjct: 519 EA 520


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 156/488 (31%), Positives = 243/488 (49%), Gaps = 27/488 (5%)

Query: 92  HYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK 151
           HY+NS  F SL  VL        ++++     +  AY K   ++ A+  F    D +  +
Sbjct: 138 HYSNSTIFHSLS-VLGSWGCANSIIVD----MLVWAYVKNGEMDLALEGFDRAGD-YGFR 191

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
            +  S N +L  +++EG        Y  ++  +   I  N +TF++VI  +C++G    A
Sbjct: 192 LSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR---IGVNVVTFDVVINGLCKVGKFQKA 248

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
             +  +M      P + TY T++DG CK  ++ +A  LL EM      P  +TFN+LI+G
Sbjct: 249 GDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            C++  +  A K+ + M  +G  PN VTYN+LI+GLC  G LD+A+ L D+M      PN
Sbjct: 309 FCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPN 368

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY  +ING  K     +   +L  + +R    N   ++TLI    K G+ +DA  L  
Sbjct: 369 VVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRS 428

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M++ G  PN   Y+ LI G CR G   EA ++  EM  NG  A+  TY+ L+    + G
Sbjct: 429 MMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKG 488

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +  KAV +  +M +     + + Y+ LI G   +G    A  V T M  +G + ++V Y+
Sbjct: 489 ETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYN 548

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +I G CN G +EEA +L NEM  LE    P+  TY+I                L + MM
Sbjct: 549 VLIKGFCNKGKLEEANRLLNEM--LEKGLIPNRTTYDI----------------LRDEMM 590

Query: 572 DRGCDPDL 579
           ++G  PD+
Sbjct: 591 EKGFIPDI 598



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 169/620 (27%), Positives = 291/620 (46%), Gaps = 35/620 (5%)

Query: 22  MKTLSLTTIPSE-RSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQ 80
           M  L LT  P    S RF S+   +++ K   + P  N+    P S      TP +   Q
Sbjct: 1   MNCLRLTQFPKRCLSTRFPSLDPKLNNTKTPFSSP--NSTYTTPNSHTF--DTPTIS--Q 54

Query: 81  LGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           L     +S ++      +  SL   L+    +  ++L   F +  K +G  H VE+  RL
Sbjct: 55  LIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLIL-CYFKWTQKEFGAIHNVEQFCRL 113

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
            H + +     +      ++L+   +   Y  +  F  H ++        N++  ++++ 
Sbjct: 114 LHLLANA----KNYNKIRALLDSFAKNAHYSNSTIF--HSLSVLGSWGCANSIIVDMLVW 167

Query: 201 TVCRLGLVDNAIQLFR-------EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
              + G +D A++ F         +   +C P       ++  L KE R+     +  EM
Sbjct: 168 AYVKNGEMDLALEGFDRAGDYGFRLSALSCNP-------MLVSLVKEGRIGVVESVYKEM 220

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                    VTF+V+INGLCK G+  +A  +V++M   G  P+ +TYNT+I G C  G +
Sbjct: 221 IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM 280

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            KA +LL  MVA +  PNE+T+  +I+G  +        +V   M+ +    N   Y++L
Sbjct: 281 FKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+GL   GK ++A+ L  +M   G KPN V Y+ALI+G C+     EA E+L ++   G 
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A N  T+++L+  + ++G+   A  +   M       N   Y+ LI G C +G ++EAR 
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  +M   G K D+V Y+ ++  LC  G   +A++L +EM   E    P   TYN L++ 
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM--FEVGLNPSHLTYNALIDG 518

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIRLF 611
             ++ N + ++++   M  +G   ++VT N+ +     K KLE   +    LNE+  +  
Sbjct: 519 YFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLE---EANRLLNEMLEKGL 575

Query: 612 KRQRTSGGFKIVEVMLQKFL 631
              RT+      E+M + F+
Sbjct: 576 IPNRTTYDILRDEMMEKGFI 595



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 190/400 (47%), Gaps = 24/400 (6%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           GC    +  ++L+    KNGE+  A +  D     G   + ++ N ++  L  +G +   
Sbjct: 155 GC-ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
            S+   M+  +   N VT+  +INGL K+G+      V+  M+   F  +   Y+T+I G
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K GK   A  L K+M+ K   PN + ++ LIDG CR      A+++  EM   G   N
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY+SL+ G   +GK  +A+ +   M+      N V Y+ LI+G C+   L+EAR +  
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            +  RG  P+V+ ++++I     AG +++A  L + ML  +    P+V TYN L+   C+
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML--DTGVCPNVSTYNCLIVGFCR 451

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
           + N+  +  L   M   G   DLVT NI + AL +K E  +         A+RL      
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRK---------AVRL------ 496

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                 ++ M +  L+P   T+  ++    R     AA+N
Sbjct: 497 ------LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALN 530



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 160/377 (42%), Gaps = 34/377 (9%)

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G + N   +  L+H L    N +K  +LLD    +    N     TI + L  LG     
Sbjct: 102 GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNS----TIFHSLSVLGSWGCA 157

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +++ M              L+    K G+ + A++ + +  + G + + +  + ++  
Sbjct: 158 NSIIVDM--------------LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVS 203

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L + G+    E +  EMI      N  T+  ++ G  + GK  KA ++ +DM       +
Sbjct: 204 LVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPS 263

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + Y+ +I G C+ GK+ +A  +  +M+++   P+ + ++ +I G C   +V  A K+F 
Sbjct: 264 VITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFE 323

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--- 588
           EM       QP+V TYN L+N LC    +  ++ L + M   G  P++VT N  +     
Sbjct: 324 EMQ--RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 589 ---LKEKLEAPQD--------GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
              LKE  E   D             N L     K  R    F +  +ML   + P  ST
Sbjct: 382 KKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST 441

Query: 638 WERVVQELCRPKRIQAA 654
           +  ++   CR   ++ A
Sbjct: 442 YNCLIVGFCREGNVKEA 458


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 144/531 (27%), Positives = 253/531 (47%), Gaps = 70/531 (13%)

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           +RLF  +  +   + +V ++N  L+ + +      A E +  +   +     P+  T+++
Sbjct: 22  VRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM---QRRGYPPDDFTYSI 78

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           V++ +C+ G +D A +L  ++     + ++ TY  ++DG CK +R+D+A+ +   M   G
Sbjct: 79  VLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGG 138

Query: 258 -CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            C P  VTFN L+ GLC    +  A  L + M   GC PN ++Y+TL+ GLC  G LD+A
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEA 198

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             L + MV   C+P+ V Y + + GL K  R  +       M  +    +   +ST+I  
Sbjct: 199 CRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGI 258

Query: 377 LFKEGKAEDAM-----------------KLWKQMMEKG---------------------- 397
           L K+G AE+A                  K +++M+ +                       
Sbjct: 259 LCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLP 318

Query: 398 ----------------CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
                           C PN   Y+ ++D LC+  + DEA+E++ EM N G + +  TYS
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ G  + GK  +A ++ ++M+K     +    + +++ L + GK+  A      M +R
Sbjct: 379 ALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKAR 438

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G  PD+V Y++++ GLC AG ++EA+    +M  +  K  PDVF+Y I++ ALC+    +
Sbjct: 439 GSTPDLVTYNTLLDGLCKAGRIDEAITFLAKM--VAAKCTPDVFSYTIIITALCRSGQAA 496

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
            +  +   M+ RG  PD V  +  L  L           + L +LA+ L K
Sbjct: 497 GAHAIFQEMVKRGVLPDTVLYHSLLDGLAR---------NGLEDLALELLK 538



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 141/534 (26%), Positives = 246/534 (46%), Gaps = 29/534 (5%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E F    + G Y   D T+  +++    +G+    + +L ++R     +   ++  +   
Sbjct: 59  EKFQQMQRRG-YPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDG 117

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
             KA  V++A+ +F TM     C   V +FNS+L  +        A   + ++  A    
Sbjct: 118 CCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKA---G 174

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             PN ++++ ++  +C+ G +D A +L+ EM  ++C PD+  Y + + GLCK NR+ EA 
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 248 LLLDEMQVDGCFPTPVTF-----------------NVLINGLCKNGELGRAAKLVDNMFL 290
               +M   G     V F                 N +I  LC++G L  A K  + M  
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK---CMPNEVTYGTIINGLVKLGR 347
           +   P+   +NTLIH +C    L   V L  RM + K   C PN  TY  +++ L K  +
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +   ++  M       +   YS L+ GL K GK + A  L ++M ++G  P++   ++
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +++ L + GK D A   L  M   G   +  TY++L+ G  ++G+  +A+     M    
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  +   Y+++I  LC  G+   A  ++ +M+ RG  PD V Y S++ GL   G  + AL
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLAL 534

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +L    LC     +PD   + ++L+ LCK      + +++  M D G   D  T
Sbjct: 535 ELLKTSLC-----KPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFT 583



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 190/338 (56%), Gaps = 4/338 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           ++ +++EA + F  M+   H   + + FN++++ + +       +  +  + + K     
Sbjct: 278 RSGMLDEACKTFEEMISRNH-PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCP 336

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  T+N+++  +C+   +D A +L  EM      PD+ TY  L+DGLCK  +LD A  L
Sbjct: 337 PNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDL 396

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+EM  +G FP   T   ++N L K G++  A   ++ M  +G  P+ VTYNTL+ GLC 
Sbjct: 397 LEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCK 456

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +D+A++ L +MVA+KC P+  +Y  II  L + G+A     +   M +R    +  +
Sbjct: 457 AGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVL 516

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y +L+ GL + G  + A++L K  +   CKP+ V++  ++DGLC+ GK ++A E++  M 
Sbjct: 517 YHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVLDGLCKAGKAEDACEVVERMA 573

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           + G  A+AFTY S++ G  + GK  KA ++  D ++ +
Sbjct: 574 DAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETH 611



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 190/436 (43%), Gaps = 72/436 (16%)

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           KG   +  TYN  +  L        A     +M      P++ TY  ++ GL K G    
Sbjct: 32  KGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDK 91

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALI 409
              +L  + E    +N   YS +I G  K  + +DA++++K M   G C P+ V +++L+
Sbjct: 92  AKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLL 151

Query: 410 DGLCRVGKPDEAEEILFE-MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
            GLC   +  EA  +LFE M   GC  N  +YS+L+ G  ++G+  +A  +W++M + +C
Sbjct: 152 KGLCSGERMSEAF-VLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS---------------- 512
           V + V Y+  + GLC+  ++ EA     +M+++G K D VA+S+                
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQN 270

Query: 513 -MIHGLCNAGSVEEALKLFNEMLCL-EPKSQ----------------------------- 541
            MI  LC +G ++EA K F EM+    P S                              
Sbjct: 271 QMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSM 330

Query: 542 ------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
                 P++ TYNI+++ LCK   +  + +L+N M + G  PD+VT +  +  L  KL  
Sbjct: 331 KEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLC-KLGK 389

Query: 596 PQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
                D L E++                 L K  +       +E M  +  +P   T+  
Sbjct: 390 LDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNT 449

Query: 641 VVQELCRPKRIQAAIN 656
           ++  LC+  RI  AI 
Sbjct: 450 LLDGLCKAGRIDEAIT 465


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 163/554 (29%), Positives = 275/554 (49%), Gaps = 43/554 (7%)

Query: 108 RMRREKRVVLEKSFIFIFKA----YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
           R+R E   V  +  +FI  A    Y K   V EA RL   MVD +  +    S++++++ 
Sbjct: 345 RLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVD-WDLEPESYSYSTLMDG 403

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
             +EGL  +A+  YN ++    + I  N +T N ++K +CR+G  ++A+ ++  M  R  
Sbjct: 404 FCREGLVTKAISVYNEML---RVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGV 460

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
            PD  +YCTL+D L K      A+ L +++   G   +   FN +ING CK  ++  A +
Sbjct: 461 TPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEE 520

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
             + M   G  P+ VTY TLI G C  GN+++A  + ++M     +P+   Y ++I GL 
Sbjct: 521 TFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLF 580

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K  +  +   +L  M  +    N   Y TLI+G   EG+ + A   +  M+EKG  PN +
Sbjct: 581 KSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVI 640

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           + S ++  L R+G+ DEA  +L +M+N     +   +  L K    +    K  +   + 
Sbjct: 641 ICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDES 700

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
           +K+  + N V Y++ I GLC+ GK+ +A+ +++ +L RG  PD   Y ++IHG   AG+V
Sbjct: 701 SKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNV 760

Query: 524 EEALKLFNEML--CLEP-------------------KSQ------------PDVFTYNIL 550
            +A  L +EML   L P                   ++Q            P+V +YNIL
Sbjct: 761 NDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNIL 820

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           ++  CK  N   ++DL N M+  G  P L+T +  +    ++ +  +  T+ L+E+   L
Sbjct: 821 IDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGK-ATNLLDEMR-EL 878

Query: 611 FKRQRTSGGFKIVE 624
           F  Q  +   K+VE
Sbjct: 879 FADQNIAKFVKLVE 892



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 172/657 (26%), Positives = 284/657 (43%), Gaps = 112/657 (17%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEE 136
            ++L   T+ SLI    + GD +  EMVL ++  E+ ++  K +   + K Y +   +EE
Sbjct: 248 GFELNVVTYNSLIDGCVSIGDMERAEMVL-KLMGERGILRNKVTLTLLIKGYCRQCKLEE 306

Query: 137 AIRLFHTM-------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           A ++   M       +DE+     +  +  V  +         A+   + ++N   + + 
Sbjct: 307 AEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKM-------DDAVRLRDEMLN---VGLR 356

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            N    N +I   C+ G V  A +L   M   + EP+ Y+Y TLMDG C+E  + +A+ +
Sbjct: 357 MNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISV 416

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY--------- 300
            +EM   G     VT N L+ GLC+ G    A  +   M  +G  P+EV+Y         
Sbjct: 417 YNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFK 476

Query: 301 --------------------------NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
                                     NT+I+G C    + +A    +RM      P+ VT
Sbjct: 477 MGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVT 536

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y T+I+G  KLG   +  +V   ME+     +  +Y++LI GLFK  K  + M L  +M 
Sbjct: 537 YRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMC 596

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK-- 452
            KG  PN V Y  LI G C  G+ D+A    F+MI  G A N    S ++   +  G+  
Sbjct: 597 LKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRID 656

Query: 453 ---------------------------------GHKAVEIWKDMAKNNCVYNEVCYSVLI 479
                                              K  +   + +K+  + N V Y++ I
Sbjct: 657 EANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAI 716

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GLC+ GK+ +A+ +++ +L RG  PD   Y ++IHG   AG+V +A  L +EM  L+  
Sbjct: 717 AGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEM--LKRG 774

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             P++ TYN L+N LCK  N+  +  L + +  +G  P++++ NI +           DG
Sbjct: 775 LAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILI-----------DG 823

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                       K   T     +   ML++ +SP   T+  ++   C+   +  A N
Sbjct: 824 ----------YCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATN 870



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 138/476 (28%), Positives = 231/476 (48%), Gaps = 17/476 (3%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            F++++K  C  G++ NA+ +F  M    C P + +   L+  L ++     A+L+ D +
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHI 209

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P   T ++++N  CK+G +  A   V  M   G   N VTYN+LI G    G++
Sbjct: 210 NRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDM 269

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV-NEYIYST 372
           ++A  +L  M     + N+VT   +I G  +  +  +  +VL  ME  +  V +EY Y  
Sbjct: 270 ERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGV 329

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI G  +  K +DA++L  +M+  G + N  + +ALI+G C+ G+  EAE +L  M++  
Sbjct: 330 LIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWD 389

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
               +++YS+LM GF   G   KA+ ++ +M +     N V ++ L+ GLC  G   +A 
Sbjct: 390 LEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDAL 449

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            VW  ML RG  PD V+Y +++  L   G    AL L+N++L          + +N ++N
Sbjct: 450 HVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILA--RGYGRSTYAFNTMIN 507

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKL--EAPQD 598
             CK   +  + +  N M + G +PD VT    +              +KEK+  EA   
Sbjct: 508 GFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILP 567

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             +  N L   LFK ++T     ++  M  K LSP   T+  ++   C   R+  A
Sbjct: 568 SIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKA 623



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 150/538 (27%), Positives = 258/538 (47%), Gaps = 31/538 (5%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           AY K   V  A+     M D    +  V ++NS+++  +  G   RA E    ++  +  
Sbjct: 227 AYCKDGWVNVAVDFVKEM-DYLGFELNVVTYNSLIDGCVSIGDMERA-EMVLKLMGER-- 282

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDE 245
            IL N +T  L+IK  CR   ++ A ++ REM        D Y Y  L+DG C+  ++D+
Sbjct: 283 GILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDD 342

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           AV L DEM   G        N LING CKNG++  A +L+  M      P   +Y+TL+ 
Sbjct: 343 AVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMD 402

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C +G + KA+S+ + M+      N VT+ +++ GL ++G   D   V   M +R    
Sbjct: 403 GFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTP 462

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +E  Y TL+  LFK G+   A+ LW  ++ +G   +T  ++ +I+G C++ K  EAEE  
Sbjct: 463 DEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETF 522

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M   G   +  TY +L+ G+ + G   +A ++ + M K   + +   Y+ LI GL + 
Sbjct: 523 NRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKS 582

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            K RE   + ++M  +G  P+VV Y ++I G C+ G +++A   + +M  +E    P+V 
Sbjct: 583 KKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDM--IEKGFAPNVI 640

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT-ALKEKLEAPQDGTDFLN 604
             + ++++L +   I  +  LL  M         V  ++FL     ++L    DG     
Sbjct: 641 ICSKIVSSLYRLGRIDEANMLLQKM---------VNLDVFLDHGYFDRLHKADDGNLDSQ 691

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
           ++A  L +  ++             F  P +  +   +  LC+  ++  A  K +S+L
Sbjct: 692 KIADTLDESSKS-------------FSLPNSVVYNIAIAGLCKSGKVDDA-KKIFSSL 735



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 131/500 (26%), Positives = 226/500 (45%), Gaps = 40/500 (8%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           ++N   ++G  Q    T  SL++     G F+    V + M +      E S+  +    
Sbjct: 416 VYNEMLRVG-IQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLL 474

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            K      A+ L++ ++   +  R+  +FN+++N   +      A E +N +   K +  
Sbjct: 475 FKMGEFFRALALWNDILARGY-GRSTYAFNTMINGFCKMEKMIEAEETFNRM---KELGF 530

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P+ +T+  +I   C+LG V+ A ++  +M      P I  Y +L+ GL K  +  E + 
Sbjct: 531 EPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMD 590

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LL EM + G  P  VT+  LI G C  G L +A     +M  KG  PN +  + ++  L 
Sbjct: 591 LLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLY 650

Query: 309 LKGNLDKAVSLLDRMV-----------------------------------ASKCMPNEV 333
             G +D+A  LL +MV                                    S  +PN V
Sbjct: 651 RLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSV 710

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            Y   I GL K G+  D  ++  S+  R F  + + Y TLI G    G   DA  L  +M
Sbjct: 711 VYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEM 770

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +++G  PN + Y+ALI+GLC+ G  D A+++  ++   G A N  +Y+ L+ G+ ++G  
Sbjct: 771 LKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNT 830

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+++   M K     + + YS LI+G C+ G + +A  +  +M       ++  +  +
Sbjct: 831 REALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKL 890

Query: 514 IHGLCNAGSVEEALKLFNEM 533
           + G    G V++  KL N M
Sbjct: 891 VEGHVKCGEVKKIAKLHNMM 910



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 191/423 (45%), Gaps = 14/423 (3%)

Query: 42  RSAVSSNKQMETEPQGNAKSEQPF-SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFK 100
           R    S     T   G  K E+   ++E FN   +LG ++    T+ +LI  Y   G+ +
Sbjct: 493 RGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELG-FEPDGVTYRTLIDGYCKLGNVE 551

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSV 160
               V  +M +E  +   + +  +     K+    E + L   M  +      V ++ ++
Sbjct: 552 EAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLK-GLSPNVVTYGTL 610

Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           +     EG   +A   Y  ++        PN +  + ++ ++ RLG +D A  L ++M  
Sbjct: 611 IAGWCDEGRLDKAFTAYFDMIEK---GFAPNVIICSKIVSSLYRLGRIDEANMLLQKM-- 665

Query: 221 RNCEPDIYTYCTLMDGLCK--ENRLDEAVL--LLDEMQVDGCFPTPVTFNVLINGLCKNG 276
                D++      D L K  +  LD   +   LDE       P  V +N+ I GLCK+G
Sbjct: 666 --VNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSG 723

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           ++  A K+  ++ L+G  P+  TY TLIHG    GN++ A SL D M+     PN +TY 
Sbjct: 724 KVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYN 783

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +INGL K G      ++   +  +    N   Y+ LI G  K G   +A+ L  +M+++
Sbjct: 784 ALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKE 843

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+ + YSALI G C+ G   +A  +L EM       N   +  L++G  + G+  K 
Sbjct: 844 GISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKI 903

Query: 457 VEI 459
            ++
Sbjct: 904 AKL 906


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 201/396 (50%), Gaps = 21/396 (5%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT  F    + +C +G  D A Q+ + M  +   PD  TY  ++  LC+  ++++A LL 
Sbjct: 422 NTANF---ARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLF 478

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+  G  P   T+ +LI+  CK G + +A    D M   GC P+ VTY  L+H     
Sbjct: 479 QEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKT 538

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV----- 365
             + +A  +  RMV + C PN +TY  +++GL K G +     V   M     +V     
Sbjct: 539 KQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFY 598

Query: 366 -----------NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
                      N   Y  LI GL K  K  DA +L   M   GC+PN ++Y ALIDG C+
Sbjct: 599 FEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCK 658

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           VGK D A+E+ F M   G      TY+SL+   F+  +   A+++   M +++C  N V 
Sbjct: 659 VGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVT 718

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ +I GLC  G+ ++A  + + M  RGC P+VV Y+S+I GL  +G V+ +L+LF +M 
Sbjct: 719 YTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQM- 777

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
            +     P+  TY +L+N  C    +  +  LL+ M
Sbjct: 778 -ITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEM 812



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 222/448 (49%), Gaps = 54/448 (12%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K + ++P+  T+ ++I + C++GL++ A   F EM    C P + TY  L+    K  ++
Sbjct: 482 KSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQV 541

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA----AKLV---DNM----FLKG 292
            +A  +   M   GC P  +T++ L++GLCK GE  +A    AK++   DN+    + +G
Sbjct: 542 PQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEG 601

Query: 293 -----CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                  PN VTY  LI GLC    +  A  LLD M ++ C PN + Y  +I+G  K+G+
Sbjct: 602 EHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGK 661

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +   V   M +  +    + Y++LI  +FK+ + + A+K+  QM+E  C PN V Y+A
Sbjct: 662 LDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTA 721

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +IDGLCR+G+  +A ++L  M   GC  N  TY+SL+ G  +SGK   +++++  M    
Sbjct: 722 MIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQG 781

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN-------- 519
           C  N V Y VLI+  C  G L EA  + ++M        V  Y S++ G           
Sbjct: 782 CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGL 841

Query: 520 -------------------------AGSVEEALKLFNEMLCLEPKSQPDVF---TYNILL 551
                                    AG +E+AL+L  EM+  E  S  ++    TY  L+
Sbjct: 842 LEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMM--EVSSSLNITSKDTYTSLI 899

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDL 579
            ALC  S +  + +L + +  +G  P+L
Sbjct: 900 QALCLASQLEKAFELYSEITRKGVVPEL 927



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 193/363 (53%), Gaps = 16/363 (4%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
             +P+T T++ VI  +C    V+ A  LF+EM      PD+YTY  L+D  CK   +++A
Sbjct: 450 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQA 509

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
               DEM+  GC P+ VT+  L++   K  ++ +A+ +   M   GC PN +TY+ L+ G
Sbjct: 510 RSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDG 569

Query: 307 LCLKGNLDKAVSLLDRMVAS----------------KCMPNEVTYGTIINGLVKLGRAVD 350
           LC  G   KA  +  +M+ +                   PN VTYG +I+GL K  + VD
Sbjct: 570 LCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVD 629

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +L  M       N  IY  LI G  K GK ++A +++ +M + G  P    Y++LID
Sbjct: 630 AQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLID 689

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
            + +  + D A ++L +M+ + C  N  TY++++ G    G+  KA+++   M K  C  
Sbjct: 690 AMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNP 749

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N V Y+ LI GL + GK+  +  ++TQM+++GC P+ V Y  +I+  C AG ++EA  L 
Sbjct: 750 NVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLL 809

Query: 531 NEM 533
           +EM
Sbjct: 810 SEM 812



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 244/474 (51%), Gaps = 27/474 (5%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  ++ K  L+E+A   F  M +   C  +V ++ ++L+  ++     +A + ++ 
Sbjct: 492 TYTILIDSFCKVGLIEQARSWFDEM-ESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHR 550

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM----------------PVRNC 223
           +V+A      PNT+T++ ++  +C+ G    A +++ +M                   + 
Sbjct: 551 MVDA---GCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSI 607

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
            P++ TY  L+DGLCK +++ +A  LLD M  +GC P  + ++ LI+G CK G+L  A +
Sbjct: 608 APNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQE 667

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           +   M   G LP   TY +LI  +     LD A+ +L +M+ S C PN VTY  +I+GL 
Sbjct: 668 VFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLC 727

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           ++G      ++L  ME+R  + N   Y++LI GL K GK + +++L+ QM+ +GC PN V
Sbjct: 728 RIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYV 787

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y  LI+  C  G  DEA  +L EM           Y S+++GF  S K   ++ + +++
Sbjct: 788 TYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEEL 845

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA---YSSMIHGLCNA 520
             +  V     Y +LI    + G+L +A  +  +M+      ++ +   Y+S+I  LC A
Sbjct: 846 ESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLA 905

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
             +E+A +L++E+        P++  +  L+  L K +  + ++ L  SM D G
Sbjct: 906 SQLEKAFELYSEI--TRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 140/571 (24%), Positives = 249/571 (43%), Gaps = 83/571 (14%)

Query: 160 VLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +LNVI+++    G + +ALE    +   K     P+  T+N +++ +   G +D   ++ 
Sbjct: 174 LLNVIVRKCCRHGAWAKALEELGRL---KDFGYRPSGATYNALVQVLATAGQMDMGFRVQ 230

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENR--------------------------------L 243
           +EM       D +T       LCKE R                                 
Sbjct: 231 KEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLF 290

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEA+  L  M+ + C P  VT+  L+ G  K  +LG   +++  M  +GC PN   +N+L
Sbjct: 291 DEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSL 350

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +H  C   +   A  LL+RM    C P  V Y   I G +  G  +     L+++ E+ +
Sbjct: 351 VHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFI-GSICSGEELPSPD-LLALAEKVY 408

Query: 364 H-----------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
                       VN   ++  + G+   GK + A ++ K MM KG  P+T  YS +I  L
Sbjct: 409 EEMLASSCVLNKVNTANFARCLCGM---GKFDKAFQIIKLMMRKGFVPDTSTYSKVITFL 465

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   K ++A  +  EM + G   + +TY+ L+  F + G   +A   + +M    C  + 
Sbjct: 466 CEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSV 525

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ L+H   +  ++ +A  ++ +M+  GC P+ + YS+++ GLC AG  ++A +++ +
Sbjct: 526 VTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAK 585

Query: 533 MLCLEPKS--------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           M+                     P+V TY  L++ LCK   +  + +LL+ M   GC+P+
Sbjct: 586 MIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPN 645

Query: 579 LVTCNIFLTALKE--KLEAPQD------------GTDFLNELAIRLFKRQRTSGGFKIVE 624
            +  +  +    +  KL+  Q+                   L   +FK +R     K++ 
Sbjct: 646 HIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLS 705

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            ML+   +P   T+  ++  LCR    Q A+
Sbjct: 706 QMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/512 (26%), Positives = 228/512 (44%), Gaps = 39/512 (7%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK-HMNI 188
           +A L +EAI   H M     C   V ++ ++L   +++    + L +   I++   +   
Sbjct: 286 EASLFDEAISFLHRMRCN-SCIPNVVTYRTLLAGFLKK----KQLGWCKRIISMMMNEGC 340

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN   FN ++ + C       A +L   M    C P    Y   +  +C    L    L
Sbjct: 341 NPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDL 400

Query: 249 L------LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L       +EM    C    V        LC  G+  +A +++  M  KG +P+  TY+ 
Sbjct: 401 LALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSK 460

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I  LC    ++KA  L   M +   +P+  TY  +I+   K+G           ME   
Sbjct: 461 VITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVG 520

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              +   Y+ L+    K  +   A  ++ +M++ GC PNT+ YSAL+DGLC+ G+  +A 
Sbjct: 521 CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKAC 580

Query: 423 EILFEMIN----------------NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           E+  +MI                 +  A N  TY +L+ G  ++ K   A E+   M+ N
Sbjct: 581 EVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSN 640

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
            C  N + Y  LI G C+ GKL  A+ V+ +M   G  P V  Y+S+I  +     ++ A
Sbjct: 641 GCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLA 700

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +K+ ++ML  E    P+V TY  +++ LC+      ++ LL+ M  RGC+P++VT    +
Sbjct: 701 IKVLSQML--ESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLI 758

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
             L         G     +++++LF +  T G
Sbjct: 759 DGL---------GKSGKVDMSLQLFTQMITQG 781


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 163/578 (28%), Positives = 260/578 (44%), Gaps = 76/578 (13%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV------- 202
           C  + K FNS+++     G +  A +    +V   HM   P  + +N++I ++       
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM---PGYVVYNILIGSICGDKDSL 424

Query: 203 ----------------------------------CRLGLVDNAIQLFREMPVRNCEPDIY 228
                                             C  G  + A  + REM  +   PD  
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY  +++ LC  ++++ A LL +EM+  G      T+ ++++  CK G + +A K  + M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              GC PN VTY  LIH       +  A  L + M++  C+PN VTY  +I+G  K G+ 
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604

Query: 349 VDGARVLMSM----------------EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
               ++   M                ++     N   Y  L+ G  K  + E+A KL   
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M  +GC+PN +VY ALIDGLC+VGK DEA+E+  EM  +G  A  +TYSSL+  +F+  +
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A ++   M +N+C  N V Y+ +I GLC+ GK  EA  +   M  +GC+P+VV Y++
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           MI G    G +E  L+L   M        P+  TY +L++  CK   +  + +LL  M  
Sbjct: 785 MIDGFGMIGKIETCLELLERM--GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842

Query: 573 R-------GCDPDLVTCNI-FLTALKEKLEAPQDGT-DFLNE---LAIRLFKRQRTSGGF 620
                   G    +   N  F+ +L    E  QD T  FL+    L   L K QR     
Sbjct: 843 THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902

Query: 621 KIVE--VMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +++E        L   +ST+  +++ LC   +++ A  
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 242/536 (45%), Gaps = 55/536 (10%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A  +   M+ +     T  +++ VLN +        A   +  +   K   ++ +  T
Sbjct: 465 EKAFSVIREMIGQGFIPDT-STYSKVLNYLCNASKMELAFLLFEEM---KRGGLVADVYT 520

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           + +++ + C+ GL++ A + F EM    C P++ TY  L+    K  ++  A  L + M 
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVD-----------NMFLKGC-----LPNEV 298
            +GC P  VT++ LI+G CK G++ +A ++ +           +M+ K        PN V
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY  L+ G C    +++A  LLD M    C PN++ Y  +I+GL K+G+  +   V   M
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E  F    Y YS+LI   FK  + + A K+  +M+E  C PN V+Y+ +IDGLC+VGK 
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           DEA +++  M   GC  N  TY++++ GF   GK    +E+ + M       N V Y VL
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG---------------------- 516
           I   C++G L  A  +  +M           Y  +I G                      
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAP 880

Query: 517 -----------LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
                      L  A  +E AL+L  E+            TYN L+ +LC  + +  +  
Sbjct: 881 FLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940

Query: 566 LLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           L + M  +G  P++ +    +  L    K+       DF++ + I+  + ++TS G
Sbjct: 941 LFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQWIEEKKTSDG 996



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 261/570 (45%), Gaps = 77/570 (13%)

Query: 157 FNSVLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           F   LNV++++    G +  ALE    +   K     P+  T+N +I+   +   +D+A 
Sbjct: 199 FGEFLNVLVRKHCRNGSFSIALE---ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS 255

Query: 213 QLFREMPVRN---------------CE-----------------PDIYTYCTLMDGLCKE 240
            + REM + N               C+                 PD   Y  L+ GLC+ 
Sbjct: 256 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEA 315

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +  +EA+  L+ M+   C P  VT++ L+ G     +LGR  ++++ M ++GC P+   +
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+L+H  C  G+   A  LL +MV    MP  V Y  +I  +     +++    L+ + E
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD--LLDLAE 433

Query: 361 RKFH--------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           + +         +N+   S+    L   GK E A  + ++M+ +G  P+T  YS +++ L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   K + A  +  EM   G  A+ +TY+ ++  F ++G   +A + + +M +  C  N 
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LIH   +  K+  A  ++  MLS GC P++V YS++I G C AG VE+A ++F  
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613

Query: 533 MLCL--------------EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           M                 +   +P+V TY  LL+  CK   +  +  LL++M   GC+P+
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673

Query: 579 LVTCNIFLTALKE--KLEAPQDGTDFLNE------------LAIRLFKRQRTSGGFKIVE 624
            +  +  +  L +  KL+  Q+    ++E            L  R FK +R     K++ 
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            ML+   +P    +  ++  LC+  +   A
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 231/560 (41%), Gaps = 111/560 (19%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N +P+T+ +  +I  +C   L + A+     M   +C P++ TY TL+ G   + +L   
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             +L+ M ++GC+P+P  FN L++  C +G+   A KL+  M   G +P  V YN LI  
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416

Query: 307 -----------------------------------------LCLKGNLDKAVSLLDRMVA 325
                                                    LC  G  +KA S++  M+ 
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
              +P+  TY  ++N L    +      +   M+      + Y Y+ ++    K G  E 
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A K + +M E GC PN V Y+ALI    +  K   A E+   M++ GC  N  TYS+L+ 
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596

Query: 446 GFFESGKGHKAVEIWKDMAKNNCV----------------YNEVCYSVLIHGLCEDGKLR 489
           G  ++G+  KA +I++ M  +  V                 N V Y  L+ G C+  ++ 
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--------------- 534
           EAR +   M   GC+P+ + Y ++I GLC  G ++EA ++  EM                
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 535 ------------------CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
                              LE    P+V  Y  +++ LCK      +  L+  M ++GC 
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           P++VT    +           DG   + ++   L          +++E M  K ++P   
Sbjct: 777 PNVVTYTAMI-----------DGFGMIGKIETCL----------ELLERMGSKGVAPNYV 815

Query: 637 TWERVVQELCRPKRIQAAIN 656
           T+  ++   C+   +  A N
Sbjct: 816 TYRVLIDHCCKNGALDVAHN 835



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 254/512 (49%), Gaps = 27/512 (5%)

Query: 76  LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYR-MRREKRVVLEKSFIFIFKAYGKAHLV 134
           +G   + D++ YS + +Y  +     L  +L+  M+R   V    ++  +  ++ KA L+
Sbjct: 475 IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLI 534

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A + F+ M  E  C   V ++ ++++  ++      A E +  +++      LPN +T
Sbjct: 535 EQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE---GCLPNIVT 590

Query: 195 FNLVIKTVCRLGLVDNAIQLFREM----PVRNCE------------PDIYTYCTLMDGLC 238
           ++ +I   C+ G V+ A Q+F  M     V + +            P++ TY  L+DG C
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K +R++EA  LLD M ++GC P  + ++ LI+GLCK G+L  A ++   M   G      
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY++LI         D A  +L +M+ + C PN V Y  +I+GL K+G+  +  +++  M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           EE+    N   Y+ +I G    GK E  ++L ++M  KG  PN V Y  LID  C+ G  
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D A  +L EM       +   Y  +++GF  + +  +++ +  ++ +++       Y +L
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLL 888

Query: 479 IHGLCEDGKLREARMVWTQM--LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           I  L +  +L  A  +  ++   S         Y+S+I  LC A  VE A +LF+EM   
Sbjct: 889 IDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM--T 946

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +    P++ ++  L+  L + S IS ++ LL+
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 240/519 (46%), Gaps = 37/519 (7%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K T   +N+++++I+++       EF   I +     +    L  N++++  CR G    
Sbjct: 162 KHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDK-EVFGEFL--NVLVRKHCRNGSFSI 218

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A++    +      P   TY  L+    K +RLD A L+  EM +        T      
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            LCK G+   A  LV+    +  +P+ V Y  LI GLC     ++A+  L+RM A+ C+P
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 331 NEVTYGTIINGLV---KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           N VTY T++ G +   +LGR     RVL  M     + +  I+++L+      G    A 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRC---KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE--------AEEILFEMINNGCAANAFT 439
           KL K+M++ G  P  VVY+ LI  +C  G  D         AE+   EM+  G   N   
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSIC--GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
            SS  +    +GK  KA  + ++M     + +   YS +++ LC   K+  A +++ +M 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G   DV  Y+ M+   C AG +E+A K FNEM   E    P+V TY  L++A  K   
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKK 568

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +S++ +L  +M+  GC P++VT +  +       +A Q       E A ++F+R   S  
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDG---HCKAGQ------VEKACQIFERMCGSKD 619

Query: 620 FKIVEVMLQKFLS----PQTSTWERVVQELCRPKRIQAA 654
              V++  +++      P   T+  ++   C+  R++ A
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 170/602 (28%), Positives = 280/602 (46%), Gaps = 93/602 (15%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           K + F  ++  +  + E   R++  +V +     TV ++N+++    +EG    A  ++ 
Sbjct: 149 KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTV-TYNTMIKSYCKEGDLTTAHRYFR 207

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++      + P T T N ++   CR G +  A  LF  MP+  C+ + Y+Y  L+ GLC
Sbjct: 208 LLLEG---GLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLC 264

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM---------- 288
               + +A++L   M+ DGC P    F  LI+GLCK+G +G A  L D M          
Sbjct: 265 DAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVM 324

Query: 289 -----------------FLK--------GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
                             LK        GC P++ TYNTLI+GLC     ++A  LL+  
Sbjct: 325 TYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNA 383

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V     P  VT+  +ING     +  D  R+   M   K  ++  ++  LI+ L K+ + 
Sbjct: 384 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 443

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A +L  ++   G  PN + Y+++IDG C+ GK D A E+L  M  +GC  NA+TY+SL
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           M G  +  K HKA+ +   M K+  + N + Y+ L+ G C++     A  ++  M   G 
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 563

Query: 504 KPDVVAYSSMIHGLCNAGSVEEAL-----------KLFNEMLC----------------- 535
           KPD  AY+ +   LC AG  EEA            K++   L                  
Sbjct: 564 KPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIE 623

Query: 536 --LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF-LTALKEK 592
             ++    PD +TY++LL+ALCKQ  ++ ++ +L+ M  RG     + C IF  T L + 
Sbjct: 624 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG-----IKCTIFAYTILID- 677

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
            E  ++G    ++ A R++  + TS G K           P  +T+   +   C+  R++
Sbjct: 678 -EMLREGK---HDHAKRMYN-EMTSSGHK-----------PSATTYTVFINSYCKEGRLE 721

Query: 653 AA 654
            A
Sbjct: 722 DA 723



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 278/602 (46%), Gaps = 75/602 (12%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E S+  + +    A  V +A+ LF  M+    C   V++F  +++ + + G    A   +
Sbjct: 253 EYSYTILIQGLCDAKCVRKALVLF-LMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           + +       ++P+ +T+N +I    +LG +++A+++   M    C PD +TY TL+ GL
Sbjct: 312 DAM---PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC------------------------ 273
           C + + +EA  LL+    +G  PT VTF  LING C                        
Sbjct: 369 C-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 274 -----------KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
                      K   L  A +L++ +   G +PN +TY ++I G C  G +D A+ +L  
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C PN  TY +++ GLVK  +      +L  M++     N   Y+TL+ G   E  
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++A +L++ M + G KP+   Y+ L D LC+ G+ +EA   +   +  G A     Y++
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTT 604

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ GF ++G    A  + + M    C  +   YSVL+H LC+  +L EA  +  QM  RG
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            K  + AY+ +I  +   G  + A +++NEM       +P   TY + +N+ CK+  +  
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMT--SSGHKPSATTYTVFINSYCKEGRLED 722

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFL-------------TALKEKLEAPQDGTDFLNELAIR 609
           + DL+  M   G  PD+VT NI +             + LK  + A  +   +   L ++
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782

Query: 610 --------LFKRQRTSGGFKIVEV---------MLQKFLSPQTSTWERVVQELCRPKRIQ 652
                     +   TSG + ++E+         M++  L+P  +T+  ++   C+  R++
Sbjct: 783 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842

Query: 653 AA 654
            A
Sbjct: 843 EA 844



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 238/519 (45%), Gaps = 56/519 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y  A   ++A+R+ + M+    CK  ++ F  ++N +I++     A E  N 
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSS-KCKLDLQVFGKLINSLIKKDRLKEAKELLNE 452

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I       ++PN +T+  +I   C+ G VD A+++ + M    C+P+ +TY +LM GL K
Sbjct: 453 I---SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE-- 297
           + +L +A+ LL +MQ DG  P  +T+  L+ G C   +   A +L + M   G  P+E  
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 298 ------------------------------VTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
                                         V Y TLI G    GN D A +L++RM+   
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C P+  TY  +++ L K  R  +   +L  M  R      + Y+ LI  + +EGK + A 
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           +++ +M   G KP+   Y+  I+  C+ G+ ++AE+++ +M   G A +  TY+ L+ G 
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 749

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT----------- 496
              G   +A    K M   +C  N   Y +L+  L + G L   R V T           
Sbjct: 750 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIELDI 808

Query: 497 ------QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
                 +M+  G  P V  YSS+I G C AG +EEA  L + M C +  S P+   Y +L
Sbjct: 809 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM-CGKGLS-PNEDIYTLL 866

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +   C       ++  ++ M + G  P L +  + +  L
Sbjct: 867 IKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGL 905



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 185/400 (46%), Gaps = 17/400 (4%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +P  +N  +  L +        ++   +   G LP+ VTYNT+I   C +G+L  A    
Sbjct: 147 SPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYF 206

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             ++     P   T   ++ G  + G       + + M       NEY Y+ LI GL   
Sbjct: 207 RLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDA 266

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
                A+ L+  M   GC PN   ++ LI GLC+ G+  +A  +   M  NG   +  TY
Sbjct: 267 KCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTY 326

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++++ G+ + G+ + A++I + M KN C  ++  Y+ LI+GLC D K  EA  +    + 
Sbjct: 327 NAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVK 385

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  P VV ++++I+G C A   ++AL++ N+M  +  K + D+  +  L+N+L K+  +
Sbjct: 386 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM--MSSKCKLDLQVFGKLINSLIKKDRL 443

Query: 561 SHSIDLLNSMMDRGCDPDLVT-------------CNIFLTALK-EKLEAPQDGTDFLNEL 606
             + +LLN +   G  P+++T              +I L  LK  + +  Q      N L
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              L K ++      ++  M +  + P   T+  ++Q  C
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 169/390 (43%), Gaps = 23/390 (5%)

Query: 113 KRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
           K V L K  +  +   + KA   + A  L   M+DE  C     +++ +L+ + ++   +
Sbjct: 593 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE-GCTPDSYTYSVLLHALCKQKRLN 651

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            AL   + +       I      + ++I  + R G  D+A +++ EM     +P   TY 
Sbjct: 652 EALPILDQM---SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 708

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
             ++  CKE RL++A  L+ +M+ +G  P  VT+N+LI+G    G + RA   +  M   
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 768

Query: 292 GCLPNEVTYNTLIHGLCLKGNL-----------------DKAVSLLDRMVASKCMPNEVT 334
            C PN  TY  L+  L LKGNL                 D    LL+RMV     P   T
Sbjct: 769 SCEPNYWTYCLLLKHL-LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTT 827

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y ++I G  K GR  +   +L  M  +    NE IY+ LI         E A+     M 
Sbjct: 828 YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMS 887

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           E G +P    Y  L+ GLC  G  ++ + +  +++  G   +   +  L  G  ++G   
Sbjct: 888 ECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVD 947

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              ++   M K  C  +   Y+++ + + E
Sbjct: 948 ICFQMLSIMEKRYCCISSQTYALVTNKMHE 977



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 163/354 (46%), Gaps = 17/354 (4%)

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+  + R  +++   +   Y   +  L +        RV   + +     +   Y+T+I 
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              KEG    A + ++ ++E G +P T   +AL+ G CR G+  +A  +   M   GC  
Sbjct: 192 SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 251

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N ++Y+ L++G  ++    KA+ ++  M ++ C  N   ++ LI GLC+ G++ +AR+++
Sbjct: 252 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M   G  P V+ Y++MI G    G + +ALK+  + L  +    PD +TYN L+  LC
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI--KELMEKNGCHPDDWTYNTLIYGLC 369

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDF- 602
            Q     + +LLN+ +  G  P +VT    +              +K K+ + +   D  
Sbjct: 370 DQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 428

Query: 603 -LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              +L   L K+ R     +++  +    L P   T+  ++   C+  ++  A+
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 482



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 119/244 (48%), Gaps = 6/244 (2%)

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           + D  + +      +  ++   Y+  +  L +    E   +++ Q+++ G  P+TV Y+ 
Sbjct: 129 SADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT 188

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I   C+ G    A      ++  G     FT ++L+ G+  +G+  KA  ++  M    
Sbjct: 189 MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  NE  Y++LI GLC+   +R+A +++  M   GC P+V A++ +I GLC +G V +A 
Sbjct: 249 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 528 KLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            LF+ M    P++   P V TYN ++    K   ++ ++ +   M   GC PD  T N  
Sbjct: 309 LLFDAM----PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364

Query: 586 LTAL 589
           +  L
Sbjct: 365 IYGL 368


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/516 (27%), Positives = 266/516 (51%), Gaps = 43/516 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  I   + K   V++A  LF  M+ +      V +++S+++ + +    ++A     H
Sbjct: 205 SYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVV-TYSSLIDGLCKAQAMNKAEAILQH 263

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + +     ++PNT T+N++I+  C LG ++ A++L ++M     +PD+ TY  L+   CK
Sbjct: 264 MFDK---GVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCK 320

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPV-----------------------------------T 264
             R  EA  + D M   G  P                                       
Sbjct: 321 IGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRA 380

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN+LI    K+G + +A      M   G  P+ V+Y+T+IH LC  G ++ AV   ++MV
Sbjct: 381 FNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMV 440

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    PN +++ ++I+GL  +G       +   M  R  H +    +T++  L KEG+  
Sbjct: 441 SEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVV 500

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A   +  ++  G KPN V Y+ LIDG C VGK DE+ +    M++ G   +++TY++L+
Sbjct: 501 EAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALL 560

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+F++G+   A+ ++++M + +  +  +  ++++HGL + G++  AR ++ +M+ RG +
Sbjct: 561 NGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQ 620

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
             +  Y++++ GLC    V+EAL++F ++   E   + DV+T+NI++NAL K   I  + 
Sbjct: 621 LRIETYNTVLGGLCENSCVDEALRMFEDLRSKE--FELDVWTFNIVINALLKVGRIDEAK 678

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAPQD 598
            L ++M+ RG  P ++T ++ + +  E+  LE   D
Sbjct: 679 SLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDD 714



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 227/455 (49%), Gaps = 2/455 (0%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++A+ +    + E      V S+N+++  +  E     ALE   H+      N  PN ++
Sbjct: 146 DDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVS 205

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           ++ +I    + G VD A  LF EM  +   PD+ TY +L+DGLCK   +++A  +L  M 
Sbjct: 206 YSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMF 265

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P   T+N++I G C  G+L  A +L+  M   G  P+ VTY  LI   C  G   
Sbjct: 266 DKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCA 325

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A S+ D MV     PN   Y  +++G    G  +D   +L  M           ++ LI
Sbjct: 326 EARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILI 385

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
               K G  + AM  + +M + G +P+ V YS +I  LC++G+ ++A     +M++ G +
Sbjct: 386 CAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLS 445

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  +++SL+ G    G+  K  E+  +M       + +  + ++  LC++G++ EA+  
Sbjct: 446 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 505

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           +  ++  G KP+VV+Y+++I G C  G ++E++K F+ M+ +  +  PD +TYN LLN  
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLR--PDSWTYNALLNGY 563

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            K   +  ++ L   M  +      +T NI L  L
Sbjct: 564 FKNGRVEDALALYREMFRKDVKFCAITSNIILHGL 598



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 130/541 (24%), Positives = 259/541 (47%), Gaps = 37/541 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI     +      E +L  M  +  +   +++  + + Y     +EEA+RL   M
Sbjct: 240 TYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKM 299

Query: 145 --------------VDEFHCK--RTVKSFNSVLNVIIQEG------LYHRALEFY---NH 179
                         + +++CK  R  ++  SV + ++++G      +YH  L  Y     
Sbjct: 300 SGSGLQPDVVTYILLIQYYCKIGRCAEA-RSVFDSMVRKGQKPNSTIYHILLHGYATKGA 358

Query: 180 IVNAKHM-------NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           +++ + +        I      FN++I    + G VD A+  F EM      PD+ +Y T
Sbjct: 359 LIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYST 418

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           ++  LCK  R+++AV   ++M  +G  P  ++F  LI+GLC  GE  +  +L   M  +G
Sbjct: 419 VIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRG 478

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ +  NT++  LC +G + +A    D ++     PN V+Y T+I+G   +G+  +  
Sbjct: 479 IHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESI 538

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           +    M       + + Y+ L++G FK G+ EDA+ L+++M  K  K   +  + ++ GL
Sbjct: 539 KQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGL 598

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            + G+   A E+  +M++ G      TY++++ G  E+    +A+ +++D+       + 
Sbjct: 599 FQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDV 658

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             ++++I+ L + G++ EA+ +++ M+ RG  P V+ YS MI      G +EE+  LF  
Sbjct: 659 WTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLF-- 716

Query: 533 MLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            L +E      D    N+++  L ++ ++  +   L  + ++    +  T  + +  + E
Sbjct: 717 -LSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIVSE 775

Query: 592 K 592
           K
Sbjct: 776 K 776



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 147/539 (27%), Positives = 231/539 (42%), Gaps = 74/539 (13%)

Query: 113 KRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHR 172
           +R  LE   I + +    +   E+A+ LF  ++ +     +V +FNSVL V+ +      
Sbjct: 9   RRTCLELERIILNRHRSGSLGREDALNLFDELLPQAR-PASVHAFNSVLTVVARA----- 62

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
                +   + +H   L  +L FN    T+ R G             V     + Y    
Sbjct: 63  -----DSSSSPRHSAALAVSL-FN----TMARSG-------------VNMMAANRYIIGI 99

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV-DNMFLK 291
           L+   C   RLD A          G     VT N LI GLC       A  +V   M   
Sbjct: 100 LIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFRRMPEL 159

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS---KCMPNEVTYGTIINGLVKLGRA 348
           G  P+  +YN LI GLC++    +A+ LL  M A     C PN V+Y TII+G  K G  
Sbjct: 160 GYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGE- 218

Query: 349 VDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           VD A  L   M  + F  +   YS+LI GL K      A  + + M +KG  PNT  Y+ 
Sbjct: 219 VDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNI 278

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I G C +G+ +EA  +L +M  +G   +  TY  L++ + + G+  +A  ++  M +  
Sbjct: 279 MIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKG 338

Query: 468 CVYNEVCYSVLIHGLCEDGKLREAR----------------------------------- 492
              N   Y +L+HG    G L + R                                   
Sbjct: 339 QKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAM 398

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
             +T+M   G +PDVV+YS++IH LC  G VE+A+  FN+M  +     P++ ++  L++
Sbjct: 399 TAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQM--VSEGLSPNIISFTSLIH 456

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIR 609
            LC         +L   M++RG  PD +  N  +  L  + ++   QD  D +  + ++
Sbjct: 457 GLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVK 515



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 25/222 (11%)

Query: 456 AVEIWKDMAK---NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
           AV ++  MA+   N    N     +LI   C  G+L  A   +   L  G +   V  + 
Sbjct: 75  AVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQ 134

Query: 513 MIHGLCNAGSVEEALKL-FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +I GLC+    ++A+ + F  M   E    PDVF+YN L+  LC +     +++LL  M 
Sbjct: 135 LIKGLCDGKRTDDAMDMVFRRM--PELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMT 192

Query: 572 DRG---CDPDLVTCNIFLTALKEKLEA---------------PQDGTDFLNELAIRLFKR 613
             G   C P++V+ +  +    ++ E                P D   + + L   L K 
Sbjct: 193 ADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTY-SSLIDGLCKA 251

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           Q  +    I++ M  K + P T T+  +++  C   +++ A+
Sbjct: 252 QAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAV 293


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 258/540 (47%), Gaps = 42/540 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y + G F     +L R +R+  +    ++  I    G+   VEEA+R+   M
Sbjct: 344 AYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM 403

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      + S+N +++++ + G    AL+  + +   K   + PN +T N++I  +C+
Sbjct: 404 --KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSM---KEAGLFPNIITVNIMIDRLCK 458

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A  +F  +  + C PD  T+C+L+DGL +  ++++A +L ++M   G  P  V 
Sbjct: 459 AQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVV 518

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI    K G      K+   M  +GC P+ +  N  +  +   G ++K  +L + + 
Sbjct: 519 YTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIK 578

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A    P+  +Y  +I+GLVK G + D  ++   M+E+  H++   Y+ +I G  K GK  
Sbjct: 579 AQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVN 638

Query: 385 DAMKLWKQMMEKGCKP-----------------------------------NTVVYSALI 409
            A +L ++M  KG +P                                   N VVYS+LI
Sbjct: 639 KAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLI 698

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  IL E++  G   N +T++ L+    ++ +  +A+  +++M    C 
Sbjct: 699 DGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCP 758

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            NEV YS++++GLC+  K  +A + W +M  +G KP+ + Y++MI GL   G+V EA  L
Sbjct: 759 PNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDL 818

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F           PD   YN ++  L   +    +  L      +GC     TC + L AL
Sbjct: 819 FERFK--SSGGIPDSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDAL 876



 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 158/601 (26%), Positives = 289/601 (48%), Gaps = 22/601 (3%)

Query: 76  LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVE 135
           +  +   ++T   ++  +  S   +    V+  MR+ K      ++  +  A   AH  +
Sbjct: 160 MAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEAD 219

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
             + L   M  E   + TV  F +++ V  +EG    AL   + +   K  +   + + +
Sbjct: 220 PMLTLLRQM-QEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEM---KSNSFNADLVLY 275

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N+ I    ++G VD A + F E+  +   PD  T+ +++  LCK  R+DEAV L +E+  
Sbjct: 276 NVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDS 335

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
           +   P    +N +I G    G+   A  L++    KGC+P+ + YN ++  L  KG +++
Sbjct: 336 NKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEE 395

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+ +L+ M      PN  +Y  +I+ L K G      +V  SM+E     N    + +I 
Sbjct: 396 ALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMID 454

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
            L K  + ++A  ++  +  K C P++V + +LIDGL R GK ++A  +  +M+++G   
Sbjct: 455 RLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTP 514

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           NA  Y+SL++ FF+ G+     +I+K+M    C  + +  +  +  + + G++ + R ++
Sbjct: 515 NAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALF 574

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            ++ ++G  PDV +YS +IHGL   G  ++  KLF EM   E     D   YNI+++  C
Sbjct: 575 EEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMK--EQGLHLDTRAYNIVIDGFC 632

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK--EKL--------EAPQDGTDF--- 602
           K   ++ +  LL  M  +G  P +VT    +  L   ++L        EA     D    
Sbjct: 633 KSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVV 692

Query: 603 -LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSN 661
             + L     K  R    + I+E ++QK L+P T TW  ++  L + + I  A+  C+ N
Sbjct: 693 VYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEAL-VCFQN 751

Query: 662 L 662
           +
Sbjct: 752 M 752



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 193/407 (47%), Gaps = 4/407 (0%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +    G+   V +A  L+  M+D       V  + S++    + G      + Y  
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAV-VYTSLIRNFFKCGRKEDGHKIYKE 541

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++   H    P+ +  N  +  V + G ++    LF E+  +   PD+ +Y  L+ GL K
Sbjct: 542 MM---HRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVK 598

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
                +   L  EM+  G       +N++I+G CK+G++ +A +L++ M  KG  P  VT
Sbjct: 599 GGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVT 658

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y ++I GL     LD+A  L +   +     N V Y ++I+G  K+GR  +   +L  + 
Sbjct: 659 YGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELM 718

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           ++    N Y ++ L+  L K  + ++A+  ++ M    C PN V YS +++GLC+V K +
Sbjct: 719 QKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFN 778

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A     EM   G   N  TY++++ G    G   +A ++++    +  + +  CY+ +I
Sbjct: 779 KAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMI 838

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
            GL    K  +A +++ +   +GC+        ++  L  A  +E+A
Sbjct: 839 EGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQA 885



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 200/412 (48%), Gaps = 8/412 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF SLI      G      M+  +M    +      +  + + + K    E+  +++  M
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEM 542

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C   +   N+ ++ + + G   +    +  I   K   + P+  +++++I  + +
Sbjct: 543 MHR-GCSPDLMLLNNYMDCVFKAGEIEKGRALFEEI---KAQGLTPDVRSYSILIHGLVK 598

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G   +  +LF EM  +    D   Y  ++DG CK  ++++A  LL+EM+  G  PT VT
Sbjct: 599 GGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVT 658

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +I+GL K   L  A  L +    K    N V Y++LI G    G +D+A  +L+ ++
Sbjct: 659 YGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELM 718

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                PN  T+  +++ LVK    +D A V   +M+  K   NE  YS +++GL K  K 
Sbjct: 719 QKGLTPNTYTWNCLLDALVK-AEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKF 777

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A   W++M ++G KPNT+ Y+ +I GL RVG   EA+++     ++G   ++  Y+++
Sbjct: 778 NKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAM 837

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNC-VYNEVCYSVLIHGLCEDGKLREARMV 494
           ++G   + K   A  ++++     C +Y++ C  VL+  L +   L +A +V
Sbjct: 838 IEGLSNANKAMDAYILFEETRLKGCRIYSKTCV-VLLDALHKADCLEQAAIV 888



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/394 (24%), Positives = 183/394 (46%), Gaps = 24/394 (6%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +P  +N L+  + +   L    ++++ M + G  P+  T   ++        L +A  ++
Sbjct: 131 SPEAYNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVI 190

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + M   K  P    Y T+I  L     A     +L  M+E  + V  ++++TLI    +E
Sbjct: 191 ETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFARE 250

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ + A+ L  +M       + V+Y+  ID   +VGK D A +   E+ + G   +  T+
Sbjct: 251 GRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTF 310

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +S++    ++ +  +AVE+++++  N  V     Y+ +I G    GK  EA  +  +   
Sbjct: 311 TSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKR 370

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           +GC P V+AY+ ++  L   G VEEAL++   M   +  + P++ +YNIL++ LCK   +
Sbjct: 371 KGCIPSVIAYNCILTCLGRKGKVEEALRILEAM---KMDAAPNLTSYNILIDMLCKAGEL 427

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             ++ + +SM + G  P+++T NI +                      RL K QR     
Sbjct: 428 EAALKVQDSMKEAGLFPNIITVNIMID---------------------RLCKAQRLDEAC 466

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            I   +  K  +P + T+  ++  L R  ++  A
Sbjct: 467 SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDA 500


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/594 (25%), Positives = 282/594 (47%), Gaps = 59/594 (9%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SL++  A+   F  +E+VL  M+ +      ++F  +  AYG++  ++ A++LFHT+ + 
Sbjct: 96  SLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREM 155

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH-MNILPNTLTFNLVIKTVCRLG 206
            +C  TV + NS+LN +++ G    AL+ Y+ ++        + +  T ++V+K +C LG
Sbjct: 156 HNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLG 215

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
            ++   +L ++   + C P +  Y  ++DG CK+  L  A   L E+++ G  PT  T+ 
Sbjct: 216 KIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYG 275

Query: 267 VLINGLCKNGE-----------------------------------LGRAAKLVDNMFLK 291
            LING CK GE                                   + +AA+ +  M   
Sbjct: 276 ALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEM 335

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           GC P+  TYNT+I+  C  G + +A   L++      +PN+ +Y  +++   K G  V  
Sbjct: 336 GCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKA 395

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
           A +L  + E     +   Y   I G+   G+ + A+ + ++MMEKG  P+  +Y+ L+ G
Sbjct: 396 AGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSG 455

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC+ G+    + +L EM++     + + +++LM GF  +G+  +A++I+K + +      
Sbjct: 456 LCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPG 515

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V Y+ +I G C+ GK+ +A     +M +    PD   YS++I G      +  ALK+F 
Sbjct: 516 IVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFG 575

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           +M  ++ K +P+V TY  L+N  CK++++  +  +   M      P++VT    +     
Sbjct: 576 QM--MKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGG--- 630

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
                              FK  +      I E+ML     P  +T+  ++  L
Sbjct: 631 ------------------FFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGL 666



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/491 (27%), Positives = 228/491 (46%), Gaps = 55/491 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +  +G+F++++ +L  M      +  K F  +  A  K  LV +A      M
Sbjct: 273 TYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRM 332

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E  C   + ++N+++N   + G    A EF   +  AK   +LPN  ++  ++   C+
Sbjct: 333 A-EMGCGPDITTYNTMINFSCKGGRIKEADEF---LEKAKERGLLPNKFSYTPLMHAYCK 388

Query: 205 LG-LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
            G  V  A  LFR   +   +PD+ +Y   + G+     +D A+++ ++M   G FP   
Sbjct: 389 QGDYVKAAGMLFRIAEIGE-KPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQ 447

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +NVL++GLCKNG       L+  M  +   P+   + TL+ G    G LD+A+ +   +
Sbjct: 448 IYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVI 507

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +     P  V Y  +I G  K G+  D    L  M+      +EY YST+I G  K+   
Sbjct: 508 IRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDM 567

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A+K++ QMM+   KPN + Y++LI+G C+      AE++   M +     N  TY++L
Sbjct: 568 SSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTL 627

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL--------------------- 482
           + GFF++GK  KA  I++ M  N C  N+  +  LI+GL                     
Sbjct: 628 VGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERS 687

Query: 483 ----------------------------CEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
                                       C+ G +  A+++ T+ML++G   D V +++M+
Sbjct: 688 LILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAML 747

Query: 515 HGLCNAGSVEE 525
           HGLC+ G  +E
Sbjct: 748 HGLCHKGKSKE 758



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/418 (28%), Positives = 218/418 (52%), Gaps = 5/418 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV+++ +++N   + G +    +    +  A+ +N+  N   FN VI    + GLV  A 
Sbjct: 270 TVETYGALINGFCKAGEFEAVDQLLTEMA-ARGLNM--NVKVFNNVIDAEFKYGLVTKAA 326

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +  R M    C PDI TY T+++  CK  R+ EA   L++ +  G  P   ++  L++  
Sbjct: 327 ETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAY 386

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G+  +AA ++  +   G  P+ V+Y   IHG+ + G +D A+ + ++M+     P+ 
Sbjct: 387 CKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDA 446

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y  +++GL K GR      +L  M +R    + Y+++TL+ G  + G+ ++A+K++K 
Sbjct: 447 QIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKV 506

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           ++ KG  P  V Y+A+I G C+ GK  +A   L +M N   A + +TYS+++ G+ +   
Sbjct: 507 IIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHD 566

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A++++  M K+    N + Y+ LI+G C+   +  A  V+  M S    P+VV Y++
Sbjct: 567 MSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTT 626

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           ++ G   AG  E+A  +F  ML       P+  T++ L+N L   +     I+  +SM
Sbjct: 627 LVGGFFKAGKPEKATSIFELMLM--NGCPPNDATFHYLINGLTNTATSPVLIEEKDSM 682



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/347 (25%), Positives = 166/347 (47%), Gaps = 17/347 (4%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A++L  + + + + +  V  F ++++  I+ G    A++ +  I+      + P  + +N
Sbjct: 464 AMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRK---GVDPGIVGYN 520

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +IK  C+ G + +A+    +M   +  PD YTY T++DG  K++ +  A+ +  +M   
Sbjct: 521 AMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKH 580

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P  +T+  LING CK  ++ RA K+   M     +PN VTY TL+ G    G  +KA
Sbjct: 581 KFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKA 640

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI------- 369
            S+ + M+ + C PN+ T+  +INGL     +        SME  +  + ++        
Sbjct: 641 TSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEG 700

Query: 370 -------YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
                  Y+++I  L K G  + A  L  +M+ KG   ++V ++A++ GLC  GK  E  
Sbjct: 701 WDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWR 760

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            I+   +N      A  YS  +  +   G+  +A  I + + + + V
Sbjct: 761 NIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLIEEDRV 807



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 9/116 (7%)

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           W      +C  + V +S L+  L       E  +V   M ++  KP   A+S++I     
Sbjct: 79  WASTRPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGE 138

Query: 520 AGSVEEALKLFNEML----CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +GS++ AL+LF+ +     CL     P V   N LLN L K   +  ++ L + M+
Sbjct: 139 SGSLDRALQLFHTVREMHNCL-----PTVVASNSLLNGLVKSGKVDVALQLYDKML 189


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 115/313 (36%), Positives = 181/313 (57%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+N++I  +C+ G +D AI+    MP   C+P++ T+  ++  +C   R  +A  L
Sbjct: 115 PDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKL 174

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +M   GC P+ VTFN+LIN LC+ G LGRA  +++ M + GC PN ++YN L+HG C 
Sbjct: 175 LSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCK 234

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +  +D+A+  LD MV+  C P+ VTY T++  L K G+      +L  +  +        
Sbjct: 235 EKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLIT 294

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+T+I GL K GK E A+KL  +M  KG KP+ + YS+L+ GL R GK DEA +   ++ 
Sbjct: 295 YNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLE 354

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   NA TY+S+M G  +S +  +A++    M    C   E  Y++LI G+  +G  +
Sbjct: 355 GLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAK 414

Query: 490 EARMVWTQMLSRG 502
           EA  +  ++ SRG
Sbjct: 415 EALDLLNELCSRG 427



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/339 (34%), Positives = 191/339 (56%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           F+  ++T C+   V  A++L  EM  +  +PD+ TY  L++G+CKE RLDEA+  L+ M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             GC P  +T N+++  +C  G    A KL+ +M  KGC P+ VT+N LI+ LC +G L 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A+ +L++M    C PN ++Y  +++G  K  +       L  M  R  + +   Y+TL+
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           + L K+GK + A+++  Q+  KGC P  + Y+ +IDGL +VGK + A ++L EM   G  
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  TYSSL+ G    GK  +A++ + D+       N + Y+ ++ GLC+  +   A   
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
              M+S+ CKP    Y+ +I G+   G  +EAL L NE+
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNEL 423



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/345 (33%), Positives = 187/345 (54%), Gaps = 3/345 (0%)

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           F+  +   CK   +G+A KL+D M  KG  P+ VTYN LI+G+C +G LD+A+  L+ M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +  C PN +T+  I+  +   GR +D  ++L  M  +    +   ++ LI+ L ++G   
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+ + ++M   GC PN++ Y+ L+ G C+  K D A E L  M++ GC  +  TY++L+
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
               + GK   AVEI   ++   C    + Y+ +I GL + GK   A  +  +M  +G K
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD++ YSS++ GL   G V+EA+K F+++  L    +P+  TYN ++  LCK      +I
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGL--GIRPNAITYNSIMLGLCKSRQTDRAI 382

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           D L  M+ + C P   T  I +  +  +  A ++  D LNEL  R
Sbjct: 383 DFLAYMISKRCKPTEATYTILIEGIAYEGLA-KEALDLLNELCSR 426



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/340 (33%), Positives = 187/340 (55%), Gaps = 8/340 (2%)

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CKE+ + +A+ LLDEM+  G  P  VT+NVLING+CK G L  A K ++NM   GC PN 
Sbjct: 93  CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK---LGRAVDGARV 354
           +T+N ++  +C  G    A  LL  M+   C P+ VT+  +IN L +   LGRA+D   +
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID---I 209

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M       N   Y+ L+ G  KE K + A++    M+ +GC P+ V Y+ L+  LC+
Sbjct: 210 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK 269

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            GK D A EIL ++ + GC+    TY++++ G  + GK  +A+++  +M +     + + 
Sbjct: 270 DGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIIT 329

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           YS L+ GL  +GK+ EA   +  +   G +P+ + Y+S++ GLC +   + A+     M 
Sbjct: 330 YSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYM- 388

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            +  + +P   TY IL+  +  +     ++DLLN +  RG
Sbjct: 389 -ISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 197/349 (56%), Gaps = 4/349 (1%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F F  +   K   V +A++L   M ++   K  V ++N ++N I +EG    A++F N  
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNK-GSKPDVVTYNVLINGICKEGRLDEAIKFLN-- 141

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
            N       PN +T N++++++C  G   +A +L  +M  + C P + T+  L++ LC++
Sbjct: 142 -NMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQ 200

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             L  A+ +L++M + GC P  +++N L++G CK  ++ RA + +D M  +GC P+ VTY
Sbjct: 201 GLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTY 260

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTL+  LC  G +D AV +L+++ +  C P  +TY T+I+GL K+G+     ++L  M  
Sbjct: 261 NTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRR 320

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    +   YS+L+SGL +EGK ++A+K +  +   G +PN + Y++++ GLC+  + D 
Sbjct: 321 KGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDR 380

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           A + L  MI+  C     TY+ L++G    G   +A+++  ++     V
Sbjct: 381 AIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 143/286 (50%), Gaps = 23/286 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S  +    KE     AMKL  +M  KG KP+ V Y+ LI+G+C+ G+ DEA + L  M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + GC  N  T++ +++    +G+   A ++  DM +  C  + V +++LI+ LC  G L 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  +  +M   GC P+ ++Y+ ++HG C    ++ A++  + M  +     PD+ TYN 
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM--VSRGCYPDIVTYNT 262

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           LL ALCK   +  ++++LN +  +GC P L+T N  +  L                    
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLS------------------- 303

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             K  +T    K+++ M +K L P   T+  +V  L R  ++  AI
Sbjct: 304 --KVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 347



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 23/148 (15%)

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            +S  +   C    V +A+KL +EM      S+PDV TYN+L+N +CK+  +  +I  LN
Sbjct: 84  GFSFYVQTTCKESGVGQAMKLLDEMR--NKGSKPDVVTYNVLINGICKEGRLDEAIKFLN 141

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
           +M   GC P+++T NI L ++                         R     K++  ML+
Sbjct: 142 NMPSYGCQPNVITHNIILRSM---------------------CSTGRWMDAEKLLSDMLR 180

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAAIN 656
           K  SP   T+  ++  LCR   +  AI+
Sbjct: 181 KGCSPSVVTFNILINFLCRQGLLGRAID 208


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 163/578 (28%), Positives = 260/578 (44%), Gaps = 76/578 (13%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV------- 202
           C  + K FNS+++     G +  A +    +V   HM   P  + +N++I ++       
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM---PGYVVYNILIGSICGDKDSL 424

Query: 203 ----------------------------------CRLGLVDNAIQLFREMPVRNCEPDIY 228
                                             C  G  + A  + REM  +   PD  
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY  +++ LC  ++++ A LL +EM+  G      T+ ++++  CK G + +A K  + M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              GC PN VTY  LIH       +  A  L + M++  C+PN VTY  +I+G  K G+ 
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604

Query: 349 VDGARVLMSM----------------EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
               ++   M                ++     N   Y  L+ G  K  + E+A KL   
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M  +GC+PN +VY ALIDGLC+VGK DEA+E+  EM  +G  A  +TYSSL+  +F+  +
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A ++   M +N+C  N V Y+ +I GLC+ GK  EA  +   M  +GC+P+VV Y++
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           MI G    G +E  L+L   M        P+  TY +L++  CK   +  + +LL  M  
Sbjct: 785 MIDGFGMIGKIETCLELLERM--GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842

Query: 573 R-------GCDPDLVTCNI-FLTALKEKLEAPQDGT-DFLNE---LAIRLFKRQRTSGGF 620
                   G    +   N  F+ +L    E  QD T  FL+    L   L K QR     
Sbjct: 843 THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902

Query: 621 KIVE--VMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +++E        L   +ST+  +++ LC   +++ A  
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/494 (27%), Positives = 224/494 (45%), Gaps = 53/494 (10%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A  +   M+ +     T  +++ VLN +        A   +  +   K   ++ +  T
Sbjct: 465 EKAFSVIREMIGQGFIPDT-STYSKVLNYLCNASKMELAFLLFEEM---KRGGLVADVYT 520

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           + +++ + C+ GL++ A + F EM    C P++ TY  L+    K  ++  A  L + M 
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVD-----------NMFLKGC-----LPNEV 298
            +GC P  VT++ LI+G CK G++ +A ++ +           +M+ K        PN V
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY  L+ G C    +++A  LLD M    C PN++ Y  +I+GL K+G+  +   V   M
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E  F    Y YS+LI   FK  + + A K+  +M+E  C PN V+Y+ +IDGLC+VGK 
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           DEA +++  M   GC  N  TY++++ GF   GK    +E+ + M       N V Y VL
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG---------------------- 516
           I   C++G L  A  +  +M           Y  +I G                      
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAP 880

Query: 517 -----------LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
                      L  A  +E AL+L  E+            TYN L+ +LC  + +  +  
Sbjct: 881 FLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940

Query: 566 LLNSMMDRGCDPDL 579
           L + M  +G  P++
Sbjct: 941 LFSEMTKKGVIPEM 954



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 261/570 (45%), Gaps = 77/570 (13%)

Query: 157 FNSVLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           F   LNV++++    G +  ALE    +   K     P+  T+N +I+   +   +D+A 
Sbjct: 199 FGEFLNVLVRKHCRNGSFSIALE---ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS 255

Query: 213 QLFREMPVRN---------------CE-----------------PDIYTYCTLMDGLCKE 240
            + REM + N               C+                 PD   Y  L+ GLC+ 
Sbjct: 256 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEA 315

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +  +EA+  L+ M+   C P  VT++ L+ G     +LGR  ++++ M ++GC P+   +
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+L+H  C  G+   A  LL +MV    MP  V Y  +I  +     +++    L+ + E
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD--LLDLAE 433

Query: 361 RKFH--------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           + +         +N+   S+    L   GK E A  + ++M+ +G  P+T  YS +++ L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   K + A  +  EM   G  A+ +TY+ ++  F ++G   +A + + +M +  C  N 
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LIH   +  K+  A  ++  MLS GC P++V YS++I G C AG VE+A ++F  
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613

Query: 533 MLCL--------------EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           M                 +   +P+V TY  LL+  CK   +  +  LL++M   GC+P+
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673

Query: 579 LVTCNIFLTALKE--KLEAPQDGTDFLNE------------LAIRLFKRQRTSGGFKIVE 624
            +  +  +  L +  KL+  Q+    ++E            L  R FK +R     K++ 
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            ML+   +P    +  ++  LC+  +   A
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 136/560 (24%), Positives = 231/560 (41%), Gaps = 111/560 (19%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N +P+T+ +  +I  +C   L + A+     M   +C P++ TY TL+ G   + +L   
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             +L+ M ++GC+P+P  FN L++  C +G+   A KL+  M   G +P  V YN LI  
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416

Query: 307 -----------------------------------------LCLKGNLDKAVSLLDRMVA 325
                                                    LC  G  +KA S++  M+ 
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
              +P+  TY  ++N L    +      +   M+      + Y Y+ ++    K G  E 
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A K + +M E GC PN V Y+ALI    +  K   A E+   M++ GC  N  TYS+L+ 
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596

Query: 446 GFFESGKGHKAVEIWKDMAKNNCV----------------YNEVCYSVLIHGLCEDGKLR 489
           G  ++G+  KA +I++ M  +  V                 N V Y  L+ G C+  ++ 
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--------------- 534
           EAR +   M   GC+P+ + Y ++I GLC  G ++EA ++  EM                
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 535 ------------------CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
                              LE    P+V  Y  +++ LCK      +  L+  M ++GC 
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           P++VT    +           DG   + ++   L          +++E M  K ++P   
Sbjct: 777 PNVVTYTAMI-----------DGFGMIGKIETCL----------ELLERMGSKGVAPNYV 815

Query: 637 TWERVVQELCRPKRIQAAIN 656
           T+  ++   C+   +  A N
Sbjct: 816 TYRVLIDHCCKNGALDVAHN 835



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/512 (27%), Positives = 254/512 (49%), Gaps = 27/512 (5%)

Query: 76  LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYR-MRREKRVVLEKSFIFIFKAYGKAHLV 134
           +G   + D++ YS + +Y  +     L  +L+  M+R   V    ++  +  ++ KA L+
Sbjct: 475 IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLI 534

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A + F+ M  E  C   V ++ ++++  ++      A E +  +++      LPN +T
Sbjct: 535 EQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE---GCLPNIVT 590

Query: 195 FNLVIKTVCRLGLVDNAIQLFREM----PVRNCE------------PDIYTYCTLMDGLC 238
           ++ +I   C+ G V+ A Q+F  M     V + +            P++ TY  L+DG C
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K +R++EA  LLD M ++GC P  + ++ LI+GLCK G+L  A ++   M   G      
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY++LI         D A  +L +M+ + C PN V Y  +I+GL K+G+  +  +++  M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           EE+    N   Y+ +I G    GK E  ++L ++M  KG  PN V Y  LID  C+ G  
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D A  +L EM       +   Y  +++GF  + +  +++ +  ++ +++       Y +L
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLL 888

Query: 479 IHGLCEDGKLREARMVWTQM--LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           I  L +  +L  A  +  ++   S         Y+S+I  LC A  VE A +LF+EM   
Sbjct: 889 IDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM--T 946

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +    P++ ++  L+  L + S IS ++ LL+
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 240/519 (46%), Gaps = 37/519 (7%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K T   +N+++++I+++       EF   I +     +    L  N++++  CR G    
Sbjct: 162 KHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDK-EVFGEFL--NVLVRKHCRNGSFSI 218

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A++    +      P   TY  L+    K +RLD A L+  EM +        T      
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            LCK G+   A  LV+    +  +P+ V Y  LI GLC     ++A+  L+RM A+ C+P
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 331 NEVTYGTIINGLV---KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           N VTY T++ G +   +LGR     RVL  M     + +  I+++L+      G    A 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRC---KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE--------AEEILFEMINNGCAANAFT 439
           KL K+M++ G  P  VVY+ LI  +C  G  D         AE+   EM+  G   N   
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSIC--GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
            SS  +    +GK  KA  + ++M     + +   YS +++ LC   K+  A +++ +M 
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G   DV  Y+ M+   C AG +E+A K FNEM   E    P+V TY  L++A  K   
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKK 568

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +S++ +L  +M+  GC P++VT +  +       +A Q       E A ++F+R   S  
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDG---HCKAGQ------VEKACQIFERMCGSKD 619

Query: 620 FKIVEVMLQKFLS----PQTSTWERVVQELCRPKRIQAA 654
              V++  +++      P   T+  ++   C+  R++ A
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 249/518 (48%), Gaps = 25/518 (4%)

Query: 131 AHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
           A+  EEA+ +    + E  C   V S++ +L  +    +  RAL+ +  ++  +     P
Sbjct: 205 ANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLF-QMMAKEGGACSP 263

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N + +N VI    + G    A  LF EM  +  +PD+ TY  ++D LCK   +D+A L+L
Sbjct: 264 NVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVL 323

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M  +G  P  VT+N +I+G    G L  AAK+   M  +G +PN V  N+ +  LC  
Sbjct: 324 RQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKH 383

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G   +A  + D M A    P+ V+Y T+++G    G   D   +  SM+      +  ++
Sbjct: 384 GRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVF 443

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI    K G  +DAM ++ +M ++G  P+ V YS +I    R+G+  +A E   +M+ 
Sbjct: 444 NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA 503

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIHGLCEDGKLR 489
            G   N   Y S+++GF   G   KA E+  +M        ++  ++ +I+ LC+DG++ 
Sbjct: 504 RGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVM 563

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  ++  +   G +PDV+ ++S+I G C  G +++A K+ + M  +  ++  D+ TY+ 
Sbjct: 564 DAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVET--DIVTYST 621

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           LL+   K   I+  + L   M  +G  P+ VT  I L                       
Sbjct: 622 LLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAG--------------------- 660

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           LF+  RT    K    M++   +   S +  ++  LCR
Sbjct: 661 LFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCR 698



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 144/532 (27%), Positives = 247/532 (46%), Gaps = 58/532 (10%)

Query: 93  YANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCK 151
           YAN  + +++ ++L+RM     V    S+  I K      + + A+ LF  M  E   C 
Sbjct: 204 YANRTE-EAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACS 262

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
             V ++N+V++   +EG   +A   ++ +       + P+ +T+NL+I  +C+   +D A
Sbjct: 263 PNVVAYNTVIHGFFKEGETGKACSLFHEMT---RQGVKPDVVTYNLIIDALCKARAMDKA 319

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
             + R+M     +PD  TY  ++ G     RL EA  +  +M+  G  P  V  N  +  
Sbjct: 320 ELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLAS 379

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK+G    AA++ D+M  KG  P+ V+Y TL+HG   +G     + L + M ++    +
Sbjct: 380 LCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAAD 439

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
              +  +I+   K G   D   +   M+++    +   YST+IS   + G+  DAM+ + 
Sbjct: 440 CRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFN 499

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA----------------- 434
           QM+ +G +PNT VY ++I G C  G   +A+E++ EMIN G                   
Sbjct: 500 QMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKD 559

Query: 435 -------------------ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
                               +  T++SL+ G+   GK  KA +I   M       + V Y
Sbjct: 560 GRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTY 619

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           S L+ G  ++G++ +   ++ +M  +G KP+ V Y  M+ GL  AG    A K F+EM  
Sbjct: 620 STLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEM-- 677

Query: 536 LEPKSQPDVFTYNILLNALCKQS---------------NISHSIDLLNSMMD 572
           +E  +   V  Y I+L  LC+ +               N+  SI +LN+M++
Sbjct: 678 IESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMIN 729



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/482 (28%), Positives = 237/482 (49%), Gaps = 18/482 (3%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQ-LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           +T + ++K +C     + A+  L   M    C P++++Y  ++ GLC  +    A+ L  
Sbjct: 193 ITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQ 252

Query: 252 EMQVDG--CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            M  +G  C P  V +N +I+G  K GE G+A  L   M  +G  P+ VTYN +I  LC 
Sbjct: 253 MMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK 312

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              +DKA  +L +M  +   P+ VTY  +I+G   LGR  + A++   M+ R    N  I
Sbjct: 313 ARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVI 372

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            ++ ++ L K G++++A +++  M  KG KP+ V Y  L+ G    G   +   +   M 
Sbjct: 373 CNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMK 432

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +NG AA+   ++ L+  + + G    A+ I+ +M +     + V YS +I      G+L 
Sbjct: 433 SNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLT 492

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A   + QM++RG +P+   Y S+I G C  G + +A +L +EM+  +   +PD+  +N 
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMIN-KGIPRPDIVFFNS 551

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQ 597
           ++N+LCK   +  + D+ + + D G  PD++T    +              + + +E   
Sbjct: 552 VINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVG 611

Query: 598 DGTDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             TD +  + L    FK  R + G  +   M +K + P T T+  ++  L R  R  AA 
Sbjct: 612 VETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAAR 671

Query: 656 NK 657
            K
Sbjct: 672 KK 673



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 225/453 (49%), Gaps = 11/453 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  +I  YA  G  K    +  +M+       +V+  SF+     +G++   +EA  +F
Sbjct: 337 TYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRS---KEAAEIF 393

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            +M  + H K  + S+ ++L+    EG +   +  +N +   K   I  +   FN++I  
Sbjct: 394 DSMTAKGH-KPDIVSYCTLLHGYASEGWFADMIGLFNSM---KSNGIAADCRVFNILIHA 449

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G+VD+A+ +F EM  +   PD+ TY T++    +  RL +A+   ++M   G  P 
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPN 509

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-LPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              ++ +I G C +G L +A +LV  M  KG   P+ V +N++I+ LC  G +  A  + 
Sbjct: 510 TAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIF 569

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D +      P+ +T+ ++I+G   +G+     ++L +ME      +   YSTL+ G FK 
Sbjct: 570 DLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKN 629

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+  D + L+++M  KG KPNTV Y  ++ GL R G+   A +   EMI +G       Y
Sbjct: 630 GRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIY 689

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
             ++ G   +    +A+ +++ +   N  ++    + +I+ + +  +  EA+ ++  + +
Sbjct: 690 GIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISA 749

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            G  P+   Y  MI  L   G+VE+A  +F+ M
Sbjct: 750 SGLLPNESTYGVMIINLLKDGAVEDANNMFSSM 782



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 222/464 (47%), Gaps = 6/464 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           EIF+S    G ++    ++ +L+  YA+ G F  +  +   M+        + F  +  A
Sbjct: 391 EIFDSMTAKG-HKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHA 449

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y K  +V++A+ +F  M  +      V ++++V++   + G    A+E +N +V      
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQ-GVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR---G 505

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEA 246
           I PNT  ++ +I+  C  G +  A +L  EM  +    PDI  + ++++ LCK+ R+ +A
Sbjct: 506 IQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDA 565

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             + D +   G  P  +TF  LI+G C  G++ +A K++D M + G   + VTY+TL+ G
Sbjct: 566 HDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDG 625

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
               G ++  ++L   M      PN VTYG ++ GL + GR V   +    M E    V 
Sbjct: 626 YFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVT 685

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             IY  ++ GL +   A++A+ L++++     K +  + + +I+ + +V + +EA+E+  
Sbjct: 686 VSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFA 745

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            +  +G   N  TY  ++    + G    A  ++  M K+  V      + +I  L E G
Sbjct: 746 TISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKG 805

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           ++ +A    +++  +    +    S M+      G   E +KL 
Sbjct: 806 EIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 158/362 (43%), Gaps = 26/362 (7%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-S 357
           TY+ L+   C     D  + L   ++ +    +++T  T++  L    R  +   VL+  
Sbjct: 159 TYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVLLHR 218

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG--CKPNTVVYSALIDGLCRV 415
           M E     N + YS ++ GL     ++ A+ L++ M ++G  C PN V Y+ +I G  + 
Sbjct: 219 MSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGFFKE 278

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G+  +A  +  EM   G   +  TY+ ++    ++    KA  + + M  N    + V Y
Sbjct: 279 GETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTY 338

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + +IHG    G+L+EA  ++ +M SRG  P++V  +S +  LC  G  +EA ++F+ M  
Sbjct: 339 NCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTA 398

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
              K  PD+ +Y  LL+    +   +  I L NSM   G   D    NI + A       
Sbjct: 399 KGHK--PDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYA----- 451

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                           KR        I   M Q+ +SP   T+  V+    R  R+  A+
Sbjct: 452 ----------------KRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAM 495

Query: 656 NK 657
            K
Sbjct: 496 EK 497


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 205/382 (53%), Gaps = 4/382 (1%)

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G V +AIQ FR +   N +   +    L+D +   N          E+   G  P    +
Sbjct: 167 GFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYY 226

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           N+LIN  CK G + R AKL+ N   K G  P  V++NTLI+GLC   NLD+   L   M 
Sbjct: 227 NILINKFCKEGSI-RDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            ++  P+  TY  +I+GL K GR     ++   M++R    N   ++ LI G ++  + +
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            AM  + QM+  G KP+ V+Y+ L++GLC+VG  ++A +++ EM   G   +  TY++L+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+ + G    A+EI K M +   V + V ++ LI G C DG++R+A     +M+  G K
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD   Y+ +I G C  G+V+   KL  EM     K  P V TYN+L+N LCKQ  + ++ 
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHK--PGVITYNVLMNGLCKQGQMKNAN 523

Query: 565 DLLNSMMDRGCDPDLVTCNIFL 586
            LL +M++ G  PD +T NI L
Sbjct: 524 MLLEAMLNLGVTPDDITYNILL 545



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 215/415 (51%), Gaps = 6/415 (1%)

Query: 120 SFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           +F+F  +  AY  +  V +AI+ F  +V   + +        +L+ +I          FY
Sbjct: 153 NFVFDALMIAYWDSGFVSDAIQCFR-LVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFY 211

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           + I+        P    +N++I   C+ G + +A  +F E+  R   P   ++ TL++GL
Sbjct: 212 SEIL---EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CK   LDE   L   M+ +  +P   T++VLI+GLCK G L  A +L D M  +G  PN 
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           +T+  LI G      +D A++   +M+     P+ V Y T++NGL K+G      +++  
Sbjct: 329 ITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M+      ++  Y+TLI G  KEG  E AM++ K M E+G   + V ++ALI G CR G+
Sbjct: 389 MKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGR 448

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             +AE  L EM+  G   +  TY+ ++ G+ + G      ++ K+M  N      + Y+V
Sbjct: 449 VRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNV 508

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           L++GLC+ G+++ A M+   ML+ G  PD + Y+ ++ G C  G  E+ LKL NE
Sbjct: 509 LMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 156/298 (52%), Gaps = 2/298 (0%)

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P    YN LI+  C +G++  A  + + +      P  V++ T+INGL K     +G
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            R+  +MEE + + + + YS LI GL KEG+ + A +L+ +M ++G +PN + ++ALIDG
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
             R  + D A     +M+  G   +   Y++L+ G  + G  +KA ++  +M       +
Sbjct: 338 QYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPD 397

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
           ++ Y+ LI G C++G L  A  +   M   G   D VA++++I G C  G V +A +   
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           EM+  E   +PD  TY ++++  CK+ N+     LL  M   G  P ++T N+ +  L
Sbjct: 458 EMV--EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 150/332 (45%), Gaps = 16/332 (4%)

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P    Y  +IN   K G   D   +   + +R        ++TLI+GL K    ++  +L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            K M E    P+   YS LI GLC+ G+ D AE++  EM   G   N  T+++L+ G + 
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           S +   A+  +  M       + V Y+ L++GLC+ G + +AR +  +M   G KPD + 
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+++I G C  G +E A+++   M   E     D   +  L++  C+   +  +   L  
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMN--EEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458

Query: 570 MMDRGCDPDLVTCNIFLTA-------------LKE-KLEAPQDGTDFLNELAIRLFKRQR 615
           M++ G  PD  T  + +               LKE ++   + G    N L   L K+ +
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                 ++E ML   ++P   T+  +++  C+
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCK 550



 Score = 45.4 bits (106), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 60/244 (24%)

Query: 412 LCRVGKPDEAEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           + R GK D A  +   +++  G   + F + +LM  +++SG    A++ ++ +  +N   
Sbjct: 128 VSRKGK-DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSN--- 183

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
               + +  HG                               ++  + N+ S       +
Sbjct: 184 ----FQIPFHGC----------------------------GYLLDKMINSNSPVTIWTFY 211

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           +E+L  E    P V  YNIL+N  CK+ +I  +  + N +  RG  P  V+ N  +    
Sbjct: 212 SEIL--EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLING-- 267

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                              L K +    GF++ + M +  + P   T+  ++  LC+  R
Sbjct: 268 -------------------LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGR 308

Query: 651 IQAA 654
           +  A
Sbjct: 309 LDVA 312


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/381 (34%), Positives = 195/381 (51%), Gaps = 21/381 (5%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT  F    + +C +G  + A Q+ +EM  +   PD  TY  ++  LC+  R+D+A LL 
Sbjct: 419 NTANF---ARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLF 475

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+  G  P   T+ +LI+  CK G + +A    D M   GC PN VTY  L+H     
Sbjct: 476 QEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKS 535

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM------EERKFH 364
             L +A  +  RMV   C PN +TY  +I+GL K G       V   +       E  F+
Sbjct: 536 KQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFY 595

Query: 365 V----------NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
                      N   Y  L++GL K  K  DA  L   M+  GC+PN +VY AL+DG C+
Sbjct: 596 FEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCK 655

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           VG+ D A+E+   M   G   +  TY+SL+   F+ G+   A+++   M K++C  N V 
Sbjct: 656 VGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVT 715

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ ++ GLC+ G+  +A  + + M  +GC P+VV Y+++I GL  AG V+  L+LF +M 
Sbjct: 716 YTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM- 774

Query: 535 CLEPKSQPDVFTYNILLNALC 555
                  P+  TY IL+N  C
Sbjct: 775 -KTKGCAPNYVTYRILINHCC 794



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/489 (28%), Positives = 237/489 (48%), Gaps = 57/489 (11%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++  V+  + Q     +A   +  +   K + + P+  T+ ++I + C+ GL++ A   F
Sbjct: 454 TYTKVITFLCQAKRVDKAFLLFQEM---KKVGVNPDVYTYTILIDSFCKAGLIEQAQSWF 510

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM    C P++ TY  L+    K  +L +A  +   M  D C+P  +T++ LI+GLCK 
Sbjct: 511 DEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKA 570

Query: 276 GELGRA----AKLV---DNM----FLKG-----CLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           GE+ +A    AKL+   DN+    + +G       PN VTY  L++GLC    +  A  L
Sbjct: 571 GEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDL 630

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           LD M+A+ C PN++ Y  +++G  K+G       V + M +  +  + + Y++LI  +FK
Sbjct: 631 LDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFK 690

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           +G+ + AMK+  QM++  C PN V Y+A++DGLC+ G+ ++A  +L  M   GC+ N  T
Sbjct: 691 DGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVT 750

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG------------- 486
           Y++L+ G  ++GK    +E++  M    C  N V Y +LI+  C  G             
Sbjct: 751 YTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMK 810

Query: 487 --------------------KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
                               +   +  +  +M S    P    Y  +I     AG +E A
Sbjct: 811 QTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETA 870

Query: 527 LKLFNEMLCLEPKSQPDVFTYNI---LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           L+L  EM  +E  S  ++ + ++   L+ ALC  S +  ++ L + M  RG  PDL    
Sbjct: 871 LELHKEM--MEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFV 928

Query: 584 IFLTALKEK 592
             +  L E+
Sbjct: 929 CLVKGLIER 937



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/572 (24%), Positives = 253/572 (44%), Gaps = 83/572 (14%)

Query: 160 VLNVIIQ----EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +LNV+++    +GL+  ALE    +   K     P+ +T+N +++ +   G V+ A ++ 
Sbjct: 171 LLNVLVRRCCLQGLWGEALEELGRL---KDFGYRPSAVTYNALVQVLASAGQVEMAFRVQ 227

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENR--------------------------------L 243
           +EM       D  T  +    LCKE R                                 
Sbjct: 228 KEMSASGFCMDRSTVGSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLF 287

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA+  L  M+ +   P  VT+  L+ G  K  +LG   ++++ M  +GC P+   +N+L
Sbjct: 288 NEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSL 347

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +H  C   +   A  L +RM    C P  V Y   I  +   GR       L+ + E+ +
Sbjct: 348 VHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSIC--GREELPNPELLDLAEKVY 405

Query: 364 H-----------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
                       +N   ++  + G+   GK E A ++ K+MM KG  P+   Y+ +I  L
Sbjct: 406 EEMLVASCVLNKINTANFARCLCGV---GKFEKAFQIVKEMMRKGFVPDASTYTKVITFL 462

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+  + D+A  +  EM   G   + +TY+ L+  F ++G   +A   + +M    C  N 
Sbjct: 463 CQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNV 522

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ L+H   +  +L +A  ++ +M+   C P+ + YS++I GLC AG +++A +++ +
Sbjct: 523 VTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAK 582

Query: 533 MLC----------LEPKS----QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           ++            E K      P+V TY  L+N LCK   +S + DLL++M+  GC+P+
Sbjct: 583 LIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPN 642

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFL--------------NELAIRLFKRQRTSGGFKIVE 624
            +  +  +    +  E       FL                L  R+FK  R     K++ 
Sbjct: 643 QIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLS 702

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            ML+   +P   T+  +V  LC+    + A+N
Sbjct: 703 QMLKDSCNPNVVTYTAMVDGLCKTGETEKALN 734



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 219/462 (47%), Gaps = 56/462 (12%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  ++ KA L+E+A   F  M     C   V ++ ++L+  ++    ++A + ++ 
Sbjct: 489 TYTILIDSFCKAGLIEQAQSWFDEMRSA-GCSPNVVTYTALLHAYLKSKQLYQANDIFHR 547

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM--PVRNCEPDIY--------- 228
           +V        PN +T++ +I  +C+ G +  A +++ ++     N E D Y         
Sbjct: 548 MVGDA---CYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTI 604

Query: 229 -----TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
                TY  L++GLCK  ++ +A  LLD M   GC P  + ++ L++G CK GE+  A +
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQE 664

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           +   M   G LP+  TY +LI  +   G LD A+ +L +M+   C PN VTY  +++GL 
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLC 724

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K G       +L  ME++    N   Y+ LI GL K GK +  ++L+ QM  KGC PN V
Sbjct: 725 KTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYV 784

Query: 404 VYSALIDGLCRVGKPDEAEE---------------------------------ILFEMIN 430
            Y  LI+  C  G  D+A                                   +L EM +
Sbjct: 785 TYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMES 844

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC---YSVLIHGLCEDGK 487
           +  A  A  Y  L+  F ++G+   A+E+ K+M + +   N      ++ LI  LC   +
Sbjct: 845 HDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQ 904

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
           + EA  ++++M  RG  PD+ A+  ++ GL       EAL+L
Sbjct: 905 VEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 148/589 (25%), Positives = 245/589 (41%), Gaps = 114/589 (19%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHC--KRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           + +    A  VE A R+   M     C  + TV SF   L    +EG +  AL+      
Sbjct: 210 LVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQAL---CKEGRWGDALDLL---- 262

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
             +  +   +T+    +I  +    L + A+     M   +  P++ TY TL+ G  K+ 
Sbjct: 263 --EREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKK 320

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +L     +++ M  +GC P+P  FN L++  C   +   A KL + M   GC P  V YN
Sbjct: 321 QLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYN 380

Query: 302 TLIHGLCLK-----------------------------------------GNLDKAVSLL 320
             I  +C +                                         G  +KA  ++
Sbjct: 381 IFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIV 440

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE--YIYSTLISGLF 378
             M+    +P+  TY  +I  L +  R VD A  L+  E +K  VN   Y Y+ LI    
Sbjct: 441 KEMMRKGFVPDASTYTKVITFLCQAKR-VDKA-FLLFQEMKKVGVNPDVYTYTILIDSFC 498

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K G  E A   + +M   GC PN V Y+AL+    +  +  +A +I   M+ + C  NA 
Sbjct: 499 KAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAI 558

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMA----------------KNNCVYNEVCYSVLIHGL 482
           TYS+L+ G  ++G+  KA E++  +                  +    N V Y  L++GL
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGL 618

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--------- 533
           C+  K+ +A  +   ML+ GC+P+ + Y +++ G C  G ++ A ++F  M         
Sbjct: 619 CKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSV 678

Query: 534 -----------------LCLEPKSQ-------PDVFTYNILLNALCKQSNISHSIDLLNS 569
                            L ++  SQ       P+V TY  +++ LCK      +++LL+ 
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSL 738

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           M  +GC P++VT     TAL + L     G     +  + LF + +T G
Sbjct: 739 MEKKGCSPNVVT----YTALIDGL-----GKAGKVDAGLELFMQMKTKG 778



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 74/323 (22%), Positives = 142/323 (43%), Gaps = 25/323 (7%)

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R+L  + E    V   + + L+     +G   +A++   ++ + G +P+ V Y+AL+  L
Sbjct: 155 RLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVL 214

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
              G+ + A  +  EM  +G   +  T  S  +   + G+   A+++   + + +   + 
Sbjct: 215 ASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQALCKEGRWGDALDL---LEREDFKLDT 271

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V  + +I GL E     EA     +M      P+VV Y +++ G      +    ++ N 
Sbjct: 272 VLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINM 331

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--K 590
           M+       P +F  N L++  C   + +++  L N M   GC P  V  NIF+ ++  +
Sbjct: 332 MMTEGCNPSPSLF--NSLVHTYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGR 389

Query: 591 EKLEAPQ-------------DGTDFLNELAIRLFKR-----QRTSGGFKIVEVMLQKFLS 632
           E+L  P+               +  LN++    F R      +    F+IV+ M++K   
Sbjct: 390 EELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFV 449

Query: 633 PQTSTWERVVQELCRPKRIQAAI 655
           P  ST+ +V+  LC+ KR+  A 
Sbjct: 450 PDASTYTKVITFLCQAKRVDKAF 472


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 205/388 (52%), Gaps = 2/388 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  ++N+VI  VC+LG +  A  L   M ++   PD+ +Y T+++G C+   LD+   L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           + M+  G  P    +  +I  LC+  +L  A +    M  +G LP+ V Y TLI G C +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G++  A      M +    P+ +TY  II+G  ++G  V+  ++   M  +    +   +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI+G  K G  +DA ++   M++ GC PN V Y+ LIDGLC+ G  D A E+L EM  
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N FTY+S++ G  +SG   +AV++  +        + V Y+ L+   C+ G++ +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A+ +  +ML +G +P +V ++ +++G C  G +E+  KL N ML       P+  T+N L
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA--KGIAPNATTFNSL 602

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPD 578
           +   C ++N+  +  +   M  RG  PD
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPD 630



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 218/453 (48%), Gaps = 6/453 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V S+++V+N   + G   +    +  I   K   + PN+  +  +I  +CR+  +  A +
Sbjct: 281 VISYSTVVNGYCRFGELDKV---WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
            F EM  +   PD   Y TL+DG CK   +  A     EM      P  +T+  +I+G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           + G++  A KL   MF KG  P+ VT+  LI+G C  G++  A  + + M+ + C PN V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T+I+GL K G       +L  M +     N + Y+++++GL K G  E+A+KL  + 
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
              G   +TV Y+ L+D  C+ G+ D+A+EIL EM+  G      T++ LM GF   G  
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
               ++   M       N   ++ L+   C    L+ A  ++  M SRG  PD   Y ++
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           + G C A +++EA  LF EM          V TY++L+    K+     + ++ + M   
Sbjct: 638 VKGHCKARNMKEAWFLFQEM--KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           G   D    + F +  K K + P    D ++E+
Sbjct: 696 GLAADKEIFD-FFSDTKYKGKRPDTIVDPIDEI 727



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/509 (27%), Positives = 243/509 (47%), Gaps = 21/509 (4%)

Query: 104 MVLYRMRREKRVVLEKSF------------IFIFKAYGKAHLVEEAIRLFHTMVDEFHCK 151
           +V + + RE R V EK              +++ +     +    AI +F    +   C 
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVC- 243

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
             V S+N V++ + Q G   R  E ++ ++  +     P+ ++++ V+   CR G +D  
Sbjct: 244 WNVASYNIVIHFVCQLG---RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
            +L   M  +  +P+ Y Y +++  LC+  +L EA     EM   G  P  V +  LI+G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            CK G++  A+K    M  +   P+ +TY  +I G C  G++ +A  L   M      P+
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VT+  +ING  K G   D  RV   M +     N   Y+TLI GL KEG  + A +L  
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M + G +PN   Y+++++GLC+ G  +EA +++ E    G  A+  TY++LM  + +SG
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +  KA EI K+M         V ++VL++G C  G L +   +   ML++G  P+   ++
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           S++   C   +++ A  ++ +M        PD  TY  L+   CK  N+  +  L   M 
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDM--CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658

Query: 572 DRGCDPDLVTCNIFLTAL---KEKLEAPQ 597
            +G    + T ++ +      K+ LEA +
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEARE 687



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 168/347 (48%), Gaps = 4/347 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I  +   GD      + + M  +       +F  +   Y KA  +++A R+ + M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +  C   V ++ ++++ + +EG    A E  + +     + + PN  T+N ++  +C+
Sbjct: 448 I-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK---IGLQPNIFTYNSIVNGLCK 503

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A++L  E        D  TY TLMD  CK   +D+A  +L EM   G  PT VT
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FNVL+NG C +G L    KL++ M  KG  PN  T+N+L+   C++ NL  A ++   M 
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    P+  TY  ++ G  K     +   +   M+ + F V+   YS LI G  K  K  
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           +A +++ QM  +G   +  ++    D   +  +PD   + + E+I N
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 171/397 (43%), Gaps = 63/397 (15%)

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL---CLKGNLDKAVS 318
           P  F+V    L   G L  A ++ + M   G + +  + N  +  L   C K     A+ 
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TAII 232

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +           N  +Y  +I+ + +LGR  +   +L+ ME + +  +   YST+++G  
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           + G+ +   KL + M  KG KPN+ +Y ++I  LCR+ K  EAE                
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE---------------- 336

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
                              E + +M +   + + V Y+ LI G C+ G +R A   + +M
Sbjct: 337 -------------------EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
            SR   PDV+ Y+++I G C  G + EA KLF+EM C     +PD  T+  L+N  CK  
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC--KGLEPDSVTFTELINGYCKAG 435

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           ++  +  + N M+  GC P++VT    +  L       +   D  NEL   ++K      
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL-----CKEGDLDSANELLHEMWKIG---- 486

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                       L P   T+  +V  LC+   I+ A+
Sbjct: 487 ------------LQPNIFTYNSIVNGLCKSGNIEEAV 511


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 248/489 (50%), Gaps = 7/489 (1%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SLI+    S D   + +V + ++    ++ E +   + K++G   LVEE + ++  M  E
Sbjct: 155 SLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRM-KE 213

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
                ++ ++N ++N ++       A + +  +   K   I+P+T+T+N++IK  C+ G 
Sbjct: 214 NGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGK---IVPDTVTYNIMIKGYCKAGK 270

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +  A++ FR+M ++N +PD  TY TL+     E   D  + L  EM+  G    P ++++
Sbjct: 271 LQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSL 330

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           +I GLCK  +   A  + + M  KGC  N   Y  LI      G++++A+ L +RM    
Sbjct: 331 VIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEG 390

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+ VTY  ++NGL K GR  DG  +      +   +N   Y++LI GL K G+ EDA 
Sbjct: 391 FEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAE 450

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+++M EKGC  ++  Y+A+ID L + GK D+A  +   M   GC    +T++ L+ G 
Sbjct: 451 NLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGL 510

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
           F+  K  +A++ W  M           +  L  GLC  GK+  A  +   +   G  P+ 
Sbjct: 511 FKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIPE- 569

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
            A+  MI+ LC A  ++EA KL + ++    +    + T  +L+NAL K  N    I L+
Sbjct: 570 TAFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRT--VLINALRKAGNSDLVIKLM 627

Query: 568 NSMMDRGCD 576
           +S +  G D
Sbjct: 628 HSKIGIGYD 636



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 197/431 (45%), Gaps = 29/431 (6%)

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV- 285
           I  + +L++ L     L +  L+  E++  G   T    N LI      G LG   +L+ 
Sbjct: 150 IECHVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSF---GNLGLVEELLW 206

Query: 286 --DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
               M   G  P+  TYN L++GL     ++ A  + + M   K +P+ VTY  +I G  
Sbjct: 207 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYC 266

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K G+          ME +    ++  Y TLI   + E   +  + L+ +M E+G +    
Sbjct: 267 KAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPH 326

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            YS +I GLC+  K  EA  +   M   GC AN   Y++L+  + ++G   +A+ +++ M
Sbjct: 327 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 386

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
                  + V YSVL++GLC+ G+L +   ++    ++G   + + Y+S+I GL  AG +
Sbjct: 387 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRI 446

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           E+A  LF EM   E     D + YN +++AL K   I  ++ L   M + GCD  + T  
Sbjct: 447 EDAENLFEEMS--EKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFT 504

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           I +           DG          LFK  +     K  + M+ K ++P  +++  +  
Sbjct: 505 ILI-----------DG----------LFKEHKNEEAIKFWDKMIDKGITPTVASFRALAI 543

Query: 644 ELCRPKRIQAA 654
            LC   ++  A
Sbjct: 544 GLCLCGKVARA 554



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 81/340 (23%), Positives = 148/340 (43%), Gaps = 40/340 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LIQ   +  DF +   +   M      +   S+  +     K     EA  +F TM
Sbjct: 292 TYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETM 351

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++  C+  V  + ++++   + G    A+  +  +   K+    P+ +T+++++  +C+
Sbjct: 352 -NQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM---KNEGFEPDAVTYSVLVNGLCK 407

Query: 205 LGLVDNAIQ-----------------------------------LFREMPVRNCEPDIYT 229
            G +D+ ++                                   LF EM  + C  D Y 
Sbjct: 408 SGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYC 467

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y  ++D L K  ++D+A+ L   M+ +GC  T  TF +LI+GL K  +   A K  D M 
Sbjct: 468 YNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMI 527

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            KG  P   ++  L  GLCL G + +A  +LD +     +P E  +  +IN L K  R  
Sbjct: 528 DKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGIIP-ETAFEDMINTLCKAQRIK 586

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           +  ++   + +R   +   I + LI+ L K G ++  +KL
Sbjct: 587 EACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKL 626


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 152/524 (29%), Positives = 254/524 (48%), Gaps = 7/524 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKR-VVLEKSFIFIFK 126
           + F    K  +YQ   ST+ +LI        +  +  ++  M R    VV       + +
Sbjct: 108 QFFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIR 167

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             G A ++ +AI +F+  +    C+ T +++NS++ ++I EG Y +  E YN + N  H 
Sbjct: 168 MLGNAKMIGKAITIFYQ-IKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHC 226

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           +  P+T+T++ +I   C+LG  D+AI+L  EM     +P    Y  ++    K + +  A
Sbjct: 227 H--PDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGA 284

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L +EM+   C P   T+  LI GL K G +  A      M  + C P+ V  N +I+ 
Sbjct: 285 LSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINF 344

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHV 365
           L   G LD  + L + M  S C+PN VTY TII  L +   R  +       M+      
Sbjct: 345 LGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISP 404

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS LI G  K  + E AM L ++M EKG  P    Y +LID L +  + D A E+ 
Sbjct: 405 SPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+  N  +++A  Y+ ++K   ++G+   A+ ++ +M+K  C  N   Y+ L+ GL   
Sbjct: 465 QELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARA 524

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
             L EA     +M   GC PD+ +Y+ +++GL   G    A+++   M       +PD  
Sbjct: 525 CMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMK--NSTIKPDAV 582

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +YN +L+AL        + +L+  M   G + DL+T +  L A+
Sbjct: 583 SYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAI 626



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 161/337 (47%), Gaps = 11/337 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREK----RVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           T+  LI+    +G         + M+RE      VV+     F+    GKA  +++ ++L
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFL----GKAGRLDDGLKL 357

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M    HC   V ++N+++  + +     R  E ++     K   I P+  T++++I 
Sbjct: 358 FEEM-GVSHCIPNVVTYNTIIKALFESK--SRVSEVFSWFERMKGSGISPSPFTYSILID 414

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C+   ++ A+ L  EM  +   P    YC+L+D L K  R D A  L  E++ +    
Sbjct: 415 GFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 474

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +   + V+I  L K G L  A  L D M   GC PN   YN L+ GL     LD+A++ +
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTM 534

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            +M    C+P+  +Y  I+NGL K G       +L +M+      +   Y+T++S L   
Sbjct: 535 RKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHA 594

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           G  E+A +L K+M   G + + + YS++++ + +V +
Sbjct: 595 GMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 154/362 (42%), Gaps = 65/362 (17%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASK---CMPNEVTYGTIINGLVKL-GRAVDGARV 354
           TY  LIH L L     +   ++  MV S      P E++    + G  K+ G+A+    +
Sbjct: 125 TYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAIT---I 181

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLC 413
              ++ RK       Y+++I  L  EG+ E   +L+ +M  +G C P+TV YSALI   C
Sbjct: 182 FYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFC 241

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           ++G+ D A  +L EM  NG    A  Y+ ++  FF+    H A+ ++++M          
Sbjct: 242 KLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEM---------- 291

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
                             R ++       C+PDV  Y+ +I GL  AG ++EA   ++EM
Sbjct: 292 ------------------RYMY-------CRPDVFTYTELIRGLGKAGRIDEAYHFYHEM 326

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
                  +PD    N ++N L K   +   + L   M    C P++VT N  + AL E  
Sbjct: 327 Q--REDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFE-- 382

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                              + R S  F   E M    +SP   T+  ++   C+  RI+ 
Sbjct: 383 ------------------SKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEK 424

Query: 654 AI 655
           A+
Sbjct: 425 AM 426


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 243/509 (47%), Gaps = 26/509 (5%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           L H M  E   +    S+N+V+  + ++    RAL+   H +  K     PN +T+N VI
Sbjct: 177 LLHRM-PELGVEPDTISYNTVVKTLCEDSRSQRALDLL-HTMVKKSGGCSPNVVTYNTVI 234

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             + R G V  A  LF EM  +   PD+ TY +++D LCK   +D+A L+L +M  +G  
Sbjct: 235 HGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQ 294

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+N +I+G   +G+    A +   M  +G +PN VT N+ +  LC  G   +A   
Sbjct: 295 PNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEF 354

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            D M A    PN VTY  +++G    G  VD   +  SME      ++ +++ +I    K
Sbjct: 355 FDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGK 414

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G  ++ M ++ QM E+G  P+   Y  +I    R+G+  +A +   +MI  G       
Sbjct: 415 RGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIV 474

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVY-NEVCYSVLIHGLCEDGKLREARMVWTQM 498
           Y SL++GF   G   KA E+  +M        N V ++ +I+ LC++G++ EA  ++  +
Sbjct: 475 YHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFV 534

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +  G +PDV+ ++S+I G    G +E+A  + + M  +    +PDV +YN L++  C+  
Sbjct: 535 IHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAM--ISAGIEPDVVSYNTLIDGYCRNG 592

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            I   + L   M+ +G  P  +T  I L                       LF   RT G
Sbjct: 593 RIDDGLILFGEMLSKGVKPTTITYGIILHG---------------------LFNDGRTVG 631

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCR 647
             K+   M++   +   ST   ++  LCR
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCR 660



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 138/504 (27%), Positives = 234/504 (46%), Gaps = 24/504 (4%)

Query: 173 ALEFYNHIVN--AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
           A+  +N I    A+    LP   T+N+++   CR         LF        + D+   
Sbjct: 98  AVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVA 157

Query: 231 CTLMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
             L+  L    R D+ V LLL  M   G  P  +++N ++  LC++    RA  L+  M 
Sbjct: 158 SILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMV 217

Query: 290 LK--GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
            K  GC PN VTYNT+IHGL  +G + KA +L   M+    +P+ VTY +II+ L K  R
Sbjct: 218 KKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCK-AR 276

Query: 348 AVDGAR-VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           A+D A  VL  M    F  N+  Y+ +I G    G+ ++   ++++M  +G  PN V  +
Sbjct: 277 AMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCN 336

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           + +  LC+ GK  EA E    M   G   N  TYS L+ G+   G     + ++  M  N
Sbjct: 337 SYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGN 396

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
             V ++  ++++I    + G + E  +++TQM  +G  PD   Y  +I      G + +A
Sbjct: 397 GIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADA 456

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD-PDLVTCNIF 585
           +  FN+M+ +  K  P+   Y+ L+   C   N+  + +L++ MM RG   P++V  N  
Sbjct: 457 MDKFNQMIAMGLK--PEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSI 514

Query: 586 LTAL--KEKLEAPQDGTDFLNELAIR----LFKR--------QRTSGGFKIVEVMLQKFL 631
           + +L  + ++    D  DF+  +  R     F           +    F +++ M+   +
Sbjct: 515 INSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGI 574

Query: 632 SPQTSTWERVVQELCRPKRIQAAI 655
            P   ++  ++   CR  RI   +
Sbjct: 575 EPDVVSYNTLIDGYCRNGRIDDGL 598



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 205/461 (44%), Gaps = 43/461 (9%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E F+S    G ++    T+  L+  YA  G F  +  +   M     V  ++ F  +  A
Sbjct: 353 EFFDSMAAKG-HKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDA 411

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           YGK  +++E + +F  M ++                                        
Sbjct: 412 YGKRGMMDETMLIFTQMQEQ---------------------------------------G 432

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           ++P+  T+ +VI    R+G + +A+  F +M     +P+   Y +L+ G C    L +A 
Sbjct: 433 VIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAK 492

Query: 248 LLLDEMQVDGCFPTP--VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
            L+ EM   G  P P  V FN +IN LCK G +  A  + D +   G  P+ +T+N+LI 
Sbjct: 493 ELVSEMMSRG-IPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLID 551

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G  L G ++KA  +LD M+++   P+ V+Y T+I+G  + GR  DG  +   M  +    
Sbjct: 552 GYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKP 611

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
               Y  ++ GLF +G+   A K+  +M+E G   +      ++ GLCR    DEA  + 
Sbjct: 612 TTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMF 671

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            ++       N    ++++   ++  K  +A E++  ++    V N   Y V+I  L ++
Sbjct: 672 KKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKE 731

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
           G + EA  +++ M   GC P     + +I  L   G + +A
Sbjct: 732 GSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKA 772


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 171/602 (28%), Positives = 280/602 (46%), Gaps = 93/602 (15%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           K + F  ++  +  + E   R++  +V +     TV ++N+++    +EG    A   + 
Sbjct: 149 KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTV-TYNTMIKSYCKEGDLTTAHRCFR 207

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++      + P T T N ++   CR G +  A  LF  MP+  C+ + Y+Y  L+ GLC
Sbjct: 208 LLLEG---GLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLC 264

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM---------- 288
           +   + EA++L   M+ DGC P    F  LI+GLCK+G +G A  L D M          
Sbjct: 265 EAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVM 324

Query: 289 -----------------FLK--------GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
                             LK        GC P++ TYNTLI+GLC     ++A  LL+  
Sbjct: 325 TYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNA 383

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V     P  VT+  +ING     +  D  R+   M   K  ++  ++  LI+ L K+ + 
Sbjct: 384 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 443

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A +L  ++   G  PN + Y+++IDG C+ GK D A E+L  M  +GC  NA+TY+SL
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           M G  +  K HKA+ +   M K+  + N + Y+ L+ G C++     A  ++  M   G 
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 563

Query: 504 KPDVVAYSSMIHGLCNAGSVEEAL-----------KLFNEMLC----------------- 535
           KPD  AY+ +   LC AG  EEA            K++   L                  
Sbjct: 564 KPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIE 623

Query: 536 --LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF-LTALKEK 592
             ++    PD +TY++LL+ALCKQ  ++ ++ +L+ M  RG     + C IF  T L + 
Sbjct: 624 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG-----IKCTIFAYTILID- 677

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
            E  ++G    ++ A R++  + TS G K           P  +T+   +   C+  R++
Sbjct: 678 -EMLREGK---HDHAKRMYN-EMTSSGHK-----------PSATTYTVFINSYCKEGRLE 721

Query: 653 AA 654
            A
Sbjct: 722 DA 723



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 159/602 (26%), Positives = 279/602 (46%), Gaps = 75/602 (12%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E S+  + +   +A  V EA+ LF  M+    C   V++F  +++ + + G    A   +
Sbjct: 253 EYSYTILIQGLCEAKCVREALVLF-LMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           + +       ++P+ +T+N +I    +LG +++A+++   M    C PD +TY TL+ GL
Sbjct: 312 DAM---PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 368

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC------------------------ 273
           C + + +EA  LL+    +G  PT VTF  LING C                        
Sbjct: 369 C-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 274 -----------KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
                      K   L  A +L++ +   G +PN +TY ++I G C  G +D A+ +L  
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C PN  TY +++ GLVK  +      +L  M++     N   Y+TL+ G   E  
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++A +L++ M + G KP+   Y+ L D LC+ G+ +EA   +   +  G A     Y++
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTT 604

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ GF ++G    A  + + M    C  +   YSVL+H LC+  +L EA  +  QM  RG
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            K  + AY+ +I  +   G  + A +++NEM       +P   TY + +N+ CK+  +  
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMT--SSGHKPSATTYTVFINSYCKEGRLED 722

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFL-------------TALKEKLEAPQDGTDFLNELAIR 609
           + DL+  M   G  PD+VT NI +             + LK  + A  +   +   L ++
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782

Query: 610 --------LFKRQRTSGGFKIVEV---------MLQKFLSPQTSTWERVVQELCRPKRIQ 652
                     +   TSG + ++E+         M++  L+P  +T+  ++   C+  R++
Sbjct: 783 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 842

Query: 653 AA 654
            A
Sbjct: 843 EA 844



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 238/519 (45%), Gaps = 56/519 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y  A   ++A+R+ + M+    CK  ++ F  ++N +I++     A E  N 
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSS-KCKLDLQVFGKLINSLIKKDRLKEAKELLNE 452

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I       ++PN +T+  +I   C+ G VD A+++ + M    C+P+ +TY +LM GL K
Sbjct: 453 I---SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE-- 297
           + +L +A+ LL +MQ DG  P  +T+  L+ G C   +   A +L + M   G  P+E  
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 298 ------------------------------VTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
                                         V Y TLI G    GN D A +L++RM+   
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 629

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C P+  TY  +++ L K  R  +   +L  M  R      + Y+ LI  + +EGK + A 
Sbjct: 630 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 689

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           +++ +M   G KP+   Y+  I+  C+ G+ ++AE+++ +M   G A +  TY+ L+ G 
Sbjct: 690 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 749

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT----------- 496
              G   +A    K M   +C  N   Y +L+  L + G L   R V T           
Sbjct: 750 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIELDI 808

Query: 497 ------QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
                 +M+  G  P V  YSS+I G C AG +EEA  L + M C +  S P+   Y +L
Sbjct: 809 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM-CGKGLS-PNEDIYTLL 866

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +   C       ++  ++ M + G  P L +  + +  L
Sbjct: 867 IKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGL 905



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 187/400 (46%), Gaps = 17/400 (4%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +P  +N  +  L +        ++   +   G LP+ VTYNT+I   C +G+L  A    
Sbjct: 147 SPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCF 206

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             ++     P   T   ++ G  + G       + + M       NEY Y+ LI GL + 
Sbjct: 207 RLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEA 266

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
               +A+ L+  M   GC PN   ++ LI GLC+ G+  +A  +   M  NG   +  TY
Sbjct: 267 KCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTY 326

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++++ G+ + G+ + A++I + M KN C  ++  Y+ LI+GLC D K  EA  +    + 
Sbjct: 327 NAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVK 385

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  P VV ++++I+G C A   ++AL++ N+M  +  K + D+  +  L+N+L K+  +
Sbjct: 386 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM--MSSKCKLDLQVFGKLINSLIKKDRL 443

Query: 561 SHSIDLLNSMMDRGCDPDLVT-------------CNIFLTALK-EKLEAPQDGTDFLNEL 606
             + +LLN +   G  P+++T              +I L  LK  + +  Q      N L
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              L K ++      ++  M +  + P   T+  ++Q  C
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 543



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 169/390 (43%), Gaps = 23/390 (5%)

Query: 113 KRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
           K V L K  +  +   + KA   + A  L   M+DE  C     +++ +L+ + ++   +
Sbjct: 593 KGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE-GCTPDSYTYSVLLHALCKQKRLN 651

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            AL   + +       I      + ++I  + R G  D+A +++ EM     +P   TY 
Sbjct: 652 EALPILDQM---SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYT 708

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
             ++  CKE RL++A  L+ +M+ +G  P  VT+N+LI+G    G + RA   +  M   
Sbjct: 709 VFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGA 768

Query: 292 GCLPNEVTYNTLIHGLCLKGNL-----------------DKAVSLLDRMVASKCMPNEVT 334
            C PN  TY  L+  L LKGNL                 D    LL+RMV     P   T
Sbjct: 769 SCEPNYWTYCLLLKHL-LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTT 827

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y ++I G  K GR  +   +L  M  +    NE IY+ LI         E A+     M 
Sbjct: 828 YSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMS 887

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           E G +P    Y  L+ GLC  G  ++ + +  +++  G   +   +  L  G  ++G   
Sbjct: 888 ECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVD 947

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              ++   M K  C  +   Y+++ + + E
Sbjct: 948 ICFQMLSIMEKRYCCISSQTYALVTNKMHE 977



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 163/354 (46%), Gaps = 17/354 (4%)

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+  + R  +++   +   Y   +  L +        RV   + +     +   Y+T+I 
Sbjct: 132 AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 191

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              KEG    A + ++ ++E G +P T   +AL+ G CR G+  +A  +   M   GC  
Sbjct: 192 SYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 251

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N ++Y+ L++G  E+    +A+ ++  M ++ C  N   ++ LI GLC+ G++ +AR+++
Sbjct: 252 NEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 311

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M   G  P V+ Y++MI G    G + +ALK+  + L  +    PD +TYN L+  LC
Sbjct: 312 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI--KELMEKNGCHPDDWTYNTLIYGLC 369

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDF- 602
            Q     + +LLN+ +  G  P +VT    +              +K K+ + +   D  
Sbjct: 370 DQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 428

Query: 603 -LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              +L   L K+ R     +++  +    L P   T+  ++   C+  ++  A+
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 482



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 119/244 (48%), Gaps = 6/244 (2%)

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           + D  + +      +  ++   Y+  +  L +    E   +++ Q+++ G  P+TV Y+ 
Sbjct: 129 SADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT 188

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I   C+ G    A      ++  G     FT ++L+ G+  +G+  KA  ++  M    
Sbjct: 189 MIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 248

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  NE  Y++LI GLCE   +REA +++  M   GC P+V A++ +I GLC +G V +A 
Sbjct: 249 CQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 308

Query: 528 KLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            LF+ M    P++   P V TYN ++    K   ++ ++ +   M   GC PD  T N  
Sbjct: 309 LLFDAM----PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 364

Query: 586 LTAL 589
           +  L
Sbjct: 365 IYGL 368


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/513 (27%), Positives = 252/513 (49%), Gaps = 11/513 (2%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E+  S  +L  Y     T   ++      G F  ++  L  M          ++  +  A
Sbjct: 108 EVVRSGIELNVY-----TLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y +  L+EEA  + ++M D+   K ++ ++N+++N + ++G Y RA      ++N   + 
Sbjct: 163 YCREGLLEEAFEIMNSMADK-GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN---IG 218

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           + P+T T+N ++   CR      A ++F EM  +   PD+ ++ +L+    +   LD+A+
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           +   +M+  G  P  V + VL++G C+NG +  A K+ D M  +GC+ + + YNT+++GL
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C +  L  A  L D MV    +P+  T+ T+I+G  + G       +  +M +R    + 
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 398

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+TLI G  K G+ E A +LW  M+ +   PN + Y  LI+  C VG   EA  +   
Sbjct: 399 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 458

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           MI  G      T ++++KG+  SG   KA E    M       + + Y+ LI+G   +  
Sbjct: 459 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDN 518

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + +A +   +M   G  PD++ Y+ +++G C  G ++EA  +  +M  +E    PD  TY
Sbjct: 519 MDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM--IEKGINPDRSTY 576

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
             L+N    Q N++ +    + M+ RG  PD V
Sbjct: 577 TALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 215/426 (50%), Gaps = 5/426 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++    +EGL   A E  N + +     + P+  T+N +I  +C+ G    A  + 
Sbjct: 155 TYNTLIGAYCREGLLEEAFEIMNSMADK---GLKPSLFTYNAIINGLCKKGRYARAKGIL 211

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM      PD  TY TL+   C+ +   EA  +  EM   G  P  V+F+ LI    +N
Sbjct: 212 IEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRN 271

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             L +A     +M   G +P+ V Y  L+HG C  GN+ +A+ + D M+   C+ + + Y
Sbjct: 272 RHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 331

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            TI+NGL K     D  ++   M ER    + Y ++TLI G  ++G    A+ L+  M +
Sbjct: 332 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 391

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +  KP+ V Y+ LIDG C+VG+ ++A E+   MI+     N  TY  L+  +   G   +
Sbjct: 392 RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSE 451

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A  +W  M +       V  + +I G C  G   +A     +M+++G  PD ++Y+++I+
Sbjct: 452 AFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 511

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G     ++++A    N+M   +    PD+ TYN+++N  C+Q  +  +  +L  M+++G 
Sbjct: 512 GFVREDNMDKAFLWINKME--KEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGI 569

Query: 576 DPDLVT 581
           +PD  T
Sbjct: 570 NPDRST 575



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 144/550 (26%), Positives = 254/550 (46%), Gaps = 59/550 (10%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  + + Y +A  + E    F  +  + +   ++ + NS+L  +++      A E +  +
Sbjct: 51  FDLLIRTYVQARKLREGTEAFRILRSKGYLV-SINACNSLLGGLVKIDWVELAWEVHREV 109

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V +    I  N  T N+++  +C+ G  D+      EM       D+ TY TL+   C+E
Sbjct: 110 VRS---GIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCRE 166

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             L+EA  +++ M   G  P+  T+N +INGLCK G   RA  ++  M   G  P+  TY
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTL+   C + N  +A  +   M+    +P+ V++ ++I                 ++  
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLI-----------------AVFS 269

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R  H+++                  A+  ++ M + G  P+ V+Y+ L+ G CR G   E
Sbjct: 270 RNRHLDQ------------------ALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLE 311

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A +I  EM+  GC  +   Y++++ G  +      A +++ +M +   + +   ++ LIH
Sbjct: 312 ALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIH 371

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C+DG + +A  ++  M  R  KPD+VAY+++I G C  G +E+A +L++ M+    K 
Sbjct: 372 GHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI--SRKI 429

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI---------------- 584
            P+  TY IL+NA C   ++S +  L + M+++G  P LVTCN                 
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADE 489

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
           FL  +  K  AP   +   N L     +       F  +  M ++ L P   T+  V+  
Sbjct: 490 FLGRMIAKGVAPDHIS--YNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNG 547

Query: 645 LCRPKRIQAA 654
            CR  R+Q A
Sbjct: 548 FCRQGRMQEA 557



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 25/189 (13%)

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
           NC  N + + +LI    +  KLRE    +  + S+G    + A +S++ GL     VE A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            ++  E++      + +V+T NI++NALCK          L+ M   G   D+VT N  +
Sbjct: 103 WEVHREVV--RSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLI 160

Query: 587 TAL-KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            A  +E L         L E              F+I+  M  K L P   T+  ++  L
Sbjct: 161 GAYCREGL---------LEE-------------AFEIMNSMADKGLKPSLFTYNAIINGL 198

Query: 646 CRPKRIQAA 654
           C+  R   A
Sbjct: 199 CKKGRYARA 207


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/418 (32%), Positives = 223/418 (53%), Gaps = 18/418 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T+N +IK +C    +  A +LF  M    C PD+ TY TL+ GLC    ++ A+ L
Sbjct: 137 PNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL 196

Query: 250 LDEMQVD------GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE------ 297
             EM  D       C P  +T+N++++GLCK G    A +L + M  +G +PNE      
Sbjct: 197 HQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGL 256

Query: 298 ----VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
               VT+N LI  LC +G + +A  LL  M+ S  +P+ VTY ++I G   +G       
Sbjct: 257 QPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARE 316

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           + +SM  +    +   Y+ LI+G  K  K E+AMKL+ +M+  G +PN + Y +L+ G+ 
Sbjct: 317 LFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIF 376

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
             GK D+A+++   M  +G A N++TY   + G  ++    +A++++ ++  +N      
Sbjct: 377 LAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIE 436

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             + LI GLC+ GKL  A  ++ ++ + G +P+VV Y+ MIHG C  G V++A  L  +M
Sbjct: 437 NLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 496

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
                   PD+ TYN L+    + + +   + LL+ M  +   PD +TC+I +  L +
Sbjct: 497 EA--NGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 552



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 151/538 (28%), Positives = 241/538 (44%), Gaps = 81/538 (15%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            AL F++ ++ +      P+  +FN ++  + ++        L+ +M +     D  T  
Sbjct: 52  HALHFFHLMMRSTPT---PSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLN 108

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L++ LC  NRL E       +   G  P  VT+N LI GLC    +  A +L   M   
Sbjct: 109 ILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKL 168

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS------KCMPNEVTYGTIINGLVKL 345
           GC P+ VTY TLI GLC  GN++ A+ L   M+         C PN +TY  I++GL K+
Sbjct: 169 GCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKV 228

Query: 346 GRAVDGARVLMSMEERKFHVNEYI----------YSTLISGLFKEGKAEDAMKLWKQMME 395
           GR  +  ++   M+ +    NE +          ++ LI  L KEGK  +A KL   M+E
Sbjct: 229 GREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIE 288

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA--------------------- 434
            G  P+ V Y++LI+G C VG  + A E+   M + GC                      
Sbjct: 289 SGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEE 348

Query: 435 --------------ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
                          N  TY SL+KG F +GK   A +++  M  +    N   Y + + 
Sbjct: 349 AMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLD 408

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           GLC++  L EA  ++T++ S   K ++   + +I GLC AG +E A +LF ++       
Sbjct: 409 GLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKL--SNEGH 466

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQD 598
           +P+V TY I+++  C++  +  +  L+  M   GC PD++T N  +    E  KLE    
Sbjct: 467 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEE--- 523

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                    ++L  R            M QK +SP   T   VV  L + ++ Q  ++
Sbjct: 524 --------VVQLLHR------------MAQKDVSPDAITCSIVVDMLSKDEKYQECLH 561



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 206/420 (49%), Gaps = 14/420 (3%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN- 182
           + K     H + EA RLF  M  +  C   V ++ +++  +   G  + AL+ +  ++N 
Sbjct: 145 LIKGLCMEHRISEATRLFLRM-QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLND 203

Query: 183 --AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN----------CEPDIYTY 230
                +N  PN +T+N+++  +C++G  D A QLF EM  +            +PD+ T+
Sbjct: 204 ISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTF 263

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             L+D LCKE ++ EA  LL  M   G  P  VT+N LI G C  G+L  A +L  +M  
Sbjct: 264 NVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 323

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           KGC P+ ++YN LI+G      +++A+ L + M+     PN +TY +++ G+   G+  D
Sbjct: 324 KGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDD 383

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
             ++   M+      N Y Y   + GL K     +AMKL+ ++     K      + LID
Sbjct: 384 AKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLID 443

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC+ GK + A E+  ++ N G   N  TY+ ++ GF   G+  KA  + + M  N C  
Sbjct: 444 GLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTP 503

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           + + Y+ L+ G  E  KL E   +  +M  +   PD +  S ++  L      +E L L 
Sbjct: 504 DIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/317 (27%), Positives = 148/317 (46%), Gaps = 46/317 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ SLI+ +   GD  S   +   M     E  V+   S+  +   Y K   VEEA++L+
Sbjct: 297 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVI---SYNVLINGYSKTLKVEEAMKLY 353

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           + M+                                  +V  +     PN +T++ ++K 
Sbjct: 354 NEML----------------------------------LVGKR-----PNVITYDSLLKG 374

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +   G VD+A +LF  M       + YTY   +DGLCK + L EA+ L  E++       
Sbjct: 375 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 434

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
               N LI+GLCK G+L  A +L + +  +G  PN VTY  +IHG C +G +DKA  L+ 
Sbjct: 435 IENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 494

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +M A+ C P+ +TY T++ G  +  +  +  ++L  M ++    +    S ++  L K+ 
Sbjct: 495 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDE 554

Query: 382 KAEDAMKLWKQM-MEKG 397
           K ++ + L  +  ++KG
Sbjct: 555 KYQECLHLLPRFPIQKG 571


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 146/482 (30%), Positives = 247/482 (51%), Gaps = 21/482 (4%)

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           +F+ K    +  V +A + F  M+      R++ SFN +L  + +   Y +    Y  + 
Sbjct: 65  MFLHKCKTGSISVTQAHQFFDLMM------RSIFSFNRLLAGLAKIEHYSQVFSLYKQMH 118

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
            A    + P+ LT N++I  +C +  ++  +     +  R   PD+ T+ TL+ GLC E+
Sbjct: 119 LA---GLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEH 175

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM------FLKGCLP 295
           R+ EA  L   MQ  GC P  VT+  LI GLC  G +  A K    M      ++  C P
Sbjct: 176 RIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRP 235

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N ++Y+ +I GLC  GN ++A+ L + MV     PN VT+  +I+ L K G+ +   ++L
Sbjct: 236 NVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLL 295

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M +     N + Y++LI G    G    A +L+  M  KG +P+ + Y+ LI+G C+ 
Sbjct: 296 EMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKT 355

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            K +EA ++  EM++ G   +  T   L+K  F +GK   A E+++ + K   +  ++C 
Sbjct: 356 LKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFR-VIKPYAMPKDLCI 414

Query: 476 S-VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
             + + GLC++G + EA  ++ ++ S   K D+  +  +I GLC AG +E A +LF ++ 
Sbjct: 415 CCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLY 474

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--K 592
             E   QPD   Y+ +++  CK+  +  +  L   M + GC PDL+T +I +    E  K
Sbjct: 475 --EEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNK 532

Query: 593 LE 594
           LE
Sbjct: 533 LE 534



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 211/404 (52%), Gaps = 8/404 (1%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM------PVRNCE 224
           HR +E     +  + +   PN +T+  +IK +C LG ++ A++  +EM       V NC 
Sbjct: 175 HRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCR 234

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P++ +Y  ++DGLCK    +EA+ L +EM   G  P  VTF+VLI+ LCK G++ +A KL
Sbjct: 235 PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKL 294

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           ++ M   G +PN  TY +LI G CL G+L+ A  L   M +    P+ ++Y  +ING  K
Sbjct: 295 LEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCK 354

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
             +  +  ++   M       +      L+  LF  GK +DA +L++ +       +  +
Sbjct: 355 TLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCI 414

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
               +DGLC+ G   EA ++  E+ +     +  T+  L+ G  ++GK   A E+++ + 
Sbjct: 415 CCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLY 474

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +     + + YS +IHG C+ G++ +A +++ +M   GC PD++ YS ++ G   +  +E
Sbjct: 475 EEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLE 534

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           + ++L + M  +E    PD   Y I+ + +CK       +DLL 
Sbjct: 535 KVVQLLHRM--IEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQ 576



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/277 (22%), Positives = 122/277 (44%), Gaps = 37/277 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI+ +   GD  S + +   M  +       S+  +   Y K   VEEA++LF+ M
Sbjct: 309 TYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEM 368

Query: 145 V-------------------------DEFHCKRTVKSFNS---------VLNVIIQEGLY 170
           +                         D     R +K +            L+ + + G  
Sbjct: 369 LHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYI 428

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
             A++ +N +   +  N+  +  TF  +I  +C+ G ++ A +LF ++     +PD   Y
Sbjct: 429 FEAMKLFNEL---ESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAY 485

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +++ G CK+ ++D+A +L  +M+ +GC P  +T+++L+ G  ++ +L +  +L+  M  
Sbjct: 486 SSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIE 545

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           K   P++  Y  +   +C      + + LL R    K
Sbjct: 546 KDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQK 582


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 170/602 (28%), Positives = 280/602 (46%), Gaps = 93/602 (15%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           K + F  ++  +  + E   R++  +V +     TV ++N+++    +EG    A  ++ 
Sbjct: 34  KCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTV-TYNTMIKSYCKEGDLTTAHRYFR 92

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++      + P T T N ++   CR G +  A  LF  MP+  C+ + Y+Y  L+ GLC
Sbjct: 93  LLLEG---GLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLC 149

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM---------- 288
               + +A++L   M+ DGC P    F  LI+GLCK+G +G A  L D M          
Sbjct: 150 DAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVM 209

Query: 289 -----------------FLK--------GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
                             LK        GC P++ TYNTLI+GLC     ++A  LL+  
Sbjct: 210 TYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNA 268

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V     P  VT+  +ING     +  D  R+   M   K  ++  ++  LI+ L K+ + 
Sbjct: 269 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 328

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A +L  ++   G  PN + Y+++IDG C+ GK D A E+L  M  +GC  NA+TY+SL
Sbjct: 329 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 388

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           M G  +  K HKA+ +   M K+  + N + Y+ L+ G C++     A  ++  M   G 
Sbjct: 389 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 448

Query: 504 KPDVVAYSSMIHGLCNAGSVEEAL-----------KLFNEMLC----------------- 535
           KPD  AY+ +   LC AG  EEA            K++   L                  
Sbjct: 449 KPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIE 508

Query: 536 --LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF-LTALKEK 592
             ++    PD +TY++LL+ALCKQ  ++ ++ +L+ M  RG     + C IF  T L + 
Sbjct: 509 RMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG-----IKCTIFAYTILID- 562

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
            E  ++G    ++ A R++  + TS G K           P  +T+   +   C+  R++
Sbjct: 563 -EMLREGK---HDHAKRMYN-EMTSSGHK-----------PSATTYTVFINSYCKEGRLE 606

Query: 653 AA 654
            A
Sbjct: 607 DA 608



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 278/602 (46%), Gaps = 75/602 (12%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E S+  + +    A  V +A+ LF  M+    C   V++F  +++ + + G    A   +
Sbjct: 138 EYSYTILIQGLCDAKCVRKALVLF-LMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 196

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           + +       ++P+ +T+N +I    +LG +++A+++   M    C PD +TY TL+ GL
Sbjct: 197 DAM---PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGL 253

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC------------------------ 273
           C + + +EA  LL+    +G  PT VTF  LING C                        
Sbjct: 254 C-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 312

Query: 274 -----------KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
                      K   L  A +L++ +   G +PN +TY ++I G C  G +D A+ +L  
Sbjct: 313 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 372

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C PN  TY +++ GLVK  +      +L  M++     N   Y+TL+ G   E  
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 432

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++A +L++ M + G KP+   Y+ L D LC+ G+ +EA   +   +  G A     Y++
Sbjct: 433 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTT 489

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ GF ++G    A  + + M    C  +   YSVL+H LC+  +L EA  +  QM  RG
Sbjct: 490 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 549

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            K  + AY+ +I  +   G  + A +++NEM       +P   TY + +N+ CK+  +  
Sbjct: 550 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMT--SSGHKPSATTYTVFINSYCKEGRLED 607

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFL-------------TALKEKLEAPQDGTDFLNELAIR 609
           + DL+  M   G  PD+VT NI +             + LK  + A  +   +   L ++
Sbjct: 608 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 667

Query: 610 --------LFKRQRTSGGFKIVEV---------MLQKFLSPQTSTWERVVQELCRPKRIQ 652
                     +   TSG + ++E+         M++  L+P  +T+  ++   C+  R++
Sbjct: 668 HLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLE 727

Query: 653 AA 654
            A
Sbjct: 728 EA 729



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 238/519 (45%), Gaps = 56/519 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y  A   ++A+R+ + M+    CK  ++ F  ++N +I++     A E  N 
Sbjct: 279 TFTNLINGYCMAEKFDDALRMKNKMMSS-KCKLDLQVFGKLINSLIKKDRLKEAKELLNE 337

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I       ++PN +T+  +I   C+ G VD A+++ + M    C+P+ +TY +LM GL K
Sbjct: 338 I---SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE-- 297
           + +L +A+ LL +MQ DG  P  +T+  L+ G C   +   A +L + M   G  P+E  
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 454

Query: 298 ------------------------------VTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
                                         V Y TLI G    GN D A +L++RM+   
Sbjct: 455 YAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEG 514

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C P+  TY  +++ L K  R  +   +L  M  R      + Y+ LI  + +EGK + A 
Sbjct: 515 CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAK 574

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           +++ +M   G KP+   Y+  I+  C+ G+ ++AE+++ +M   G A +  TY+ L+ G 
Sbjct: 575 RMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGC 634

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT----------- 496
              G   +A    K M   +C  N   Y +L+  L + G L   R V T           
Sbjct: 635 GHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLK-GNLAYVRSVDTSGMWNLIELDI 693

Query: 497 ------QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
                 +M+  G  P V  YSS+I G C AG +EEA  L + M C +  S P+   Y +L
Sbjct: 694 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM-CGKGLS-PNEDIYTLL 751

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +   C       ++  ++ M + G  P L +  + +  L
Sbjct: 752 IKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGL 790



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/400 (26%), Positives = 185/400 (46%), Gaps = 17/400 (4%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +P  +N  +  L +        ++   +   G LP+ VTYNT+I   C +G+L  A    
Sbjct: 32  SPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYF 91

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             ++     P   T   ++ G  + G       + + M       NEY Y+ LI GL   
Sbjct: 92  RLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDA 151

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
                A+ L+  M   GC PN   ++ LI GLC+ G+  +A  +   M  NG   +  TY
Sbjct: 152 KCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTY 211

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++++ G+ + G+ + A++I + M KN C  ++  Y+ LI+GLC D K  EA  +    + 
Sbjct: 212 NAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVK 270

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  P VV ++++I+G C A   ++AL++ N+M  +  K + D+  +  L+N+L K+  +
Sbjct: 271 EGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM--MSSKCKLDLQVFGKLINSLIKKDRL 328

Query: 561 SHSIDLLNSMMDRGCDPDLVT-------------CNIFLTALK-EKLEAPQDGTDFLNEL 606
             + +LLN +   G  P+++T              +I L  LK  + +  Q      N L
Sbjct: 329 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 388

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
              L K ++      ++  M +  + P   T+  ++Q  C
Sbjct: 389 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQC 428



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/396 (25%), Positives = 170/396 (42%), Gaps = 23/396 (5%)

Query: 107 YRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII 165
           Y     K V L K  +  +   + KA   + A  L   M+DE  C     +++ +L+ + 
Sbjct: 472 YSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDE-GCTPDSYTYSVLLHALC 530

Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP 225
           ++   + AL   + +       I      + ++I  + R G  D+A +++ EM     +P
Sbjct: 531 KQKRLNEALPILDQM---SLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKP 587

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
              TY   ++  CKE RL++A  L+ +M+ +G  P  VT+N+LI+G    G + RA   +
Sbjct: 588 SATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTL 647

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNL-----------------DKAVSLLDRMVASKC 328
             M    C PN  TY  L+  L LKGNL                 D    LL+RMV    
Sbjct: 648 KRMVGASCEPNYWTYCLLLKHL-LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGL 706

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P   TY ++I G  K GR  +   +L  M  +    NE IY+ LI         E A+ 
Sbjct: 707 NPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALS 766

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
               M E G +P    Y  L+ GLC  G  ++ + +  +++  G   +   +  L  G  
Sbjct: 767 FVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLL 826

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           ++G      ++   M K  C  +   Y+++ + + E
Sbjct: 827 KAGYVDICFQMLSIMEKRYCCISSQTYALVTNKMHE 862



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/354 (24%), Positives = 163/354 (46%), Gaps = 17/354 (4%)

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+  + R  +++   +   Y   +  L +        RV   + +     +   Y+T+I 
Sbjct: 17  AIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIK 76

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              KEG    A + ++ ++E G +P T   +AL+ G CR G+  +A  +   M   GC  
Sbjct: 77  SYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQR 136

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N ++Y+ L++G  ++    KA+ ++  M ++ C  N   ++ LI GLC+ G++ +AR+++
Sbjct: 137 NEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF 196

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M   G  P V+ Y++MI G    G + +ALK+  + L  +    PD +TYN L+  LC
Sbjct: 197 DAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKI--KELMEKNGCHPDDWTYNTLIYGLC 254

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDF- 602
            Q     + +LLN+ +  G  P +VT    +              +K K+ + +   D  
Sbjct: 255 DQKT-EEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 313

Query: 603 -LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              +L   L K+ R     +++  +    L P   T+  ++   C+  ++  A+
Sbjct: 314 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIAL 367



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 126/259 (48%), Gaps = 8/259 (3%)

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           + D  + +      +  ++   Y+  +  L +    E   +++ Q+++ G  P+TV Y+ 
Sbjct: 14  SADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNT 73

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I   C+ G    A      ++  G     FT ++L+ G+  +G+  KA  ++  M    
Sbjct: 74  MIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMG 133

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  NE  Y++LI GLC+   +R+A +++  M   GC P+V A++ +I GLC +G V +A 
Sbjct: 134 CQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDAR 193

Query: 528 KLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            LF+ M    P++   P V TYN ++    K   ++ ++ +   M   GC PD  T N  
Sbjct: 194 LLFDAM----PQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTL 249

Query: 586 LTALKEKLEAPQDGTDFLN 604
           +  L +  +  ++  + LN
Sbjct: 250 IYGLCD--QKTEEAEELLN 266


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 153/493 (31%), Positives = 240/493 (48%), Gaps = 46/493 (9%)

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           +GK  L   A  L+  MVD    +  V +   +LN + + G    AL ++      + M+
Sbjct: 138 FGKLKL---ACSLYEEMVDR-GLRPVVLTCKFLLNALCKSGNLELALRYF------EKMS 187

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
            +P   T+ ++I  + R   VD A   F EM      P+ +TY  +++GL K  ++ EA 
Sbjct: 188 SIPCAATWTILIDGLFRAIRVDEACYYFEEMK-HTAIPNNWTYTVVINGLVKAGKVAEAE 246

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            +L EM V    PT   +  +I G CK G++G+A  L+++M  KG   + +TYNTLIHG 
Sbjct: 247 RVLQEMPV----PTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGH 302

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME-ERKFHVN 366
           C    +D+A  LL+ M ++  +P+  TY  +I GL +  R  +   +L ++  E     N
Sbjct: 303 CRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPN 362

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+TLI G  K  +  DA +L+ +M+  G  P+ V YS LI GLC  G+  EA   L 
Sbjct: 363 VVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLE 422

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM+          YSS++ G   +G+   A  ++  M  N C  N   Y+ LI+GLC+ G
Sbjct: 423 EMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTG 482

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML------------ 534
           +L +A++   +M  RGC PD V Y ++I GLC     +EA  L+   L            
Sbjct: 483 RLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCN 542

Query: 535 -------CLEPKSQ-----------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
                  CLE   +           P  F Y  ++ +LCK++N++ +  LL  M+  G  
Sbjct: 543 VVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIK 602

Query: 577 PDLVTCNIFLTAL 589
           PD  T +  + A+
Sbjct: 603 PDGSTVDALVGAM 615



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 140/464 (30%), Positives = 222/464 (47%), Gaps = 32/464 (6%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N   + + R G  + A +LF+E   +   PD  TY  L+ GLC   +L  A  L +EM
Sbjct: 92  TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  +T   L+N LCK+G L  A +  + M     +P   T+  LI GL     +
Sbjct: 152 VDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKM---SSIPCAATWTILIDGLFRAIRV 208

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A    + M     +PN  TY  +INGLVK G+  +  RVL  M           Y+++
Sbjct: 209 DEACYYFEEM-KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLAN----YTSV 263

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I G  K G    A  L + M  KG + + + Y+ LI G CR+ + D A E+L EM +N  
Sbjct: 264 IGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDF 323

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMA-KNNCVYNEVCYSVLIHGLCEDGKLREAR 492
             + FTY  L+ G   + +  +A ++   +  +++C  N V Y+ LI G  +  ++ +A 
Sbjct: 324 VPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAY 383

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++ +M++ G  PDVV YS++I GLCNAG   EA     EM  +  K  P V  Y+ +++
Sbjct: 384 QLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEM--VGKKILPKVPVYSSVIS 441

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
            LC+   +  +  + +SM+  GC P+L   N  +  L +        T  L +  +R   
Sbjct: 442 GLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCK--------TGRLCDAKLR--- 490

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                     V+ M ++  SP   T+  ++  LCR  R   A +
Sbjct: 491 ----------VKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACD 524



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 198/417 (47%), Gaps = 41/417 (9%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +++N +I    +   V++A QLF EM      PD+ TY TL+ GLC   R  EA   
Sbjct: 361 PNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSY 420

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+EM      P    ++ +I+GLC+ GEL  A+ + D+M   GC PN   YN+LI+GLC 
Sbjct: 421 LEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCK 480

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE-- 367
            G L  A   +  M    C P+ VTYGT+I GL +  R  +   + +   E+   ++E  
Sbjct: 481 TGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETS 540

Query: 368 ------------------------------YIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
                                         + Y+T+I  L KE    +A +L + M+  G
Sbjct: 541 CNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAG 600

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA- 456
            KP+     AL+  +CR  K   A   L EM+  G   +  TYS+L+   F++GK  +A 
Sbjct: 601 IKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAH 660

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           V + + ++  +C  +E+ Y  LI       ++ EAR V  ++ S+     +VAY++++ G
Sbjct: 661 VVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKG 720

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVF---TYNILLNALCKQSNISHSIDLLNSM 570
           L    +++   +L  EM     K    V    T+NIL+   C+      ++ +L+ M
Sbjct: 721 LFRTRNLQMVYELLREM-----KRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM 772



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 187/412 (45%), Gaps = 37/412 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +   + KA  V +A +LF  MV        V ++++++  +   G   RA E +++
Sbjct: 365 SYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVV-TYSTLIRGLCNAG---RASEAHSY 420

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +       ILP    ++ VI  +CR G +D A  +F  M    C+P++  Y +L+ GLCK
Sbjct: 421 LEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCK 480

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE---------------------- 277
             RL +A L + EM   GC P  VT+  LI GLC+                         
Sbjct: 481 TGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETS 540

Query: 278 ----------LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
                     L +A +++  +   G  P    Y T+I  LC + NL +A  LL+ M+ + 
Sbjct: 541 CNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAG 600

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+  T   ++  + +  +AV     L  M       +   YSTL++ LFK GK  +A 
Sbjct: 601 IKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAH 660

Query: 388 KLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
            + ++++    C P+ + Y  LI       + +EA  +L E+ +     +   Y++L+KG
Sbjct: 661 VVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKG 720

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            F +       E+ ++M +N  V NE  +++LI G C  G+   A  V ++M
Sbjct: 721 LFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM 772



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 159/391 (40%), Gaps = 95/391 (24%)

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           + F    + Y+     L + G+ E+A +L+K+   +   P+++ Y  LI GLC  GK   
Sbjct: 84  QDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKL 143

Query: 421 AEEILFEMINNG---------------CAAN-----------------AFTYSSLMKGFF 448
           A  +  EM++ G               C +                  A T++ L+ G F
Sbjct: 144 ACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLF 203

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV-----------WTQ 497
            + +  +A   +++M K+  + N   Y+V+I+GL + GK+ EA  V           +T 
Sbjct: 204 RAIRVDEACYYFEEM-KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTS 262

Query: 498 MLSRGCKP--------------------DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           ++   CK                     D + Y+++IHG C    ++ A +L  EM    
Sbjct: 263 VIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEM---- 318

Query: 538 PKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDR-GCDPDLVTCNIFLTALK--- 590
            KS    PD+FTY+IL+  LC+   +S + DLL ++ +   C P++V+ N  +       
Sbjct: 319 -KSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAA 377

Query: 591 ----------EKLEAPQDGTDFLNELAIR-LFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
                     E + A Q          IR L    R S     +E M+ K + P+   + 
Sbjct: 378 RVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYS 437

Query: 640 RVVQELCRPKRIQAA--------INKCWSNL 662
            V+  LCR   + AA         N C  NL
Sbjct: 438 SVISGLCRAGELDAASTVFDSMVANGCQPNL 468



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/287 (20%), Positives = 116/287 (40%), Gaps = 58/287 (20%)

Query: 424 ILFEMINNGCAANAF---------------TYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           ++  M+ NG +A  F               TY+   +    +G+  +A  ++K+      
Sbjct: 62  VILHMVKNGESAMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQEL 121

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           + + + Y +LI GLC  GKL+ A  ++ +M+ RG +P V+    +++ LC +G++E AL+
Sbjct: 122 IPDSITYGILIRGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALR 181

Query: 529 LFNEMLC-----------------------------LEPKSQPDVFTYNILLNALCKQSN 559
            F +M                               ++  + P+ +TY +++N L K   
Sbjct: 182 YFEKMSSIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGK 241

Query: 560 ISHSIDLLNSM-----------MDRGCDP-DLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           ++ +  +L  M           +   C   D+      L  +K K    Q      N L 
Sbjct: 242 VAEAERVLQEMPVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRK--GYQGDNLTYNTLI 299

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               + Q     ++++E M      P   T++ ++  LCR KR+  A
Sbjct: 300 HGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEA 346


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 245/491 (49%), Gaps = 6/491 (1%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
           F +  ++L    R   +V+ +    + K    A  + EA+ +    + E  C   V S+N
Sbjct: 114 FATFGLILKSGWRVNNIVINQ----LLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYN 169

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           ++L     E     ALE  + + +++  +  PN +++ +VI      G VD A  LF EM
Sbjct: 170 TLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEM 229

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             R  +P++ TY T++DGLCK   +D A  +  +M   G  P   T+N LI+G    G+ 
Sbjct: 230 MDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKW 289

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
               ++++ M   G  P+  TY +L++ LC  G   +A  L D M+     PN   YG +
Sbjct: 290 KEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGIL 349

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+G    G   +   +L  M E     + +I++ + +   K+   ++AM ++ +M ++G 
Sbjct: 350 IHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGL 409

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ V Y ALID LC++G+ D+A     +M+N G A N F ++SL+ G     K  KA E
Sbjct: 410 SPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKE 469

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
            + +M       + V ++ ++  LC  G++ +A+ +   M   G +P V++Y+++I G C
Sbjct: 470 FYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHC 529

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G ++EA K  + ML +  K  PD +TYN LL+  C+   I  +  +   M+  G  P 
Sbjct: 530 LVGRIDEAAKSLDVMLSVGLK--PDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587

Query: 579 LVTCNIFLTAL 589
           +VT +  L  L
Sbjct: 588 VVTYSTILHGL 598



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 231/507 (45%), Gaps = 42/507 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDE--FHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           S+  + K +      EEA+ L H M D     C   V S+  V+N    EG   +A   Y
Sbjct: 167 SYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKA---Y 223

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           N  +      I PN +T+  VI  +C+  +VD A  +F++M  +  +PD  TY  L+ G 
Sbjct: 224 NLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGY 283

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
               +  E V +L+EM   G  P   T+  L+N LC NG    A  L D+M  KG  PN 
Sbjct: 284 LSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNV 343

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
             Y  LIHG   KG L +   LL+ MV +   P+   +  I     K     +   +   
Sbjct: 344 AIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNK 403

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M+++    +   Y  LI  L K G+ +DA+  + QMM +G  PN  V+++L+ GLC V K
Sbjct: 404 MKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDK 463

Query: 418 PDEAEEILFEMINNGCAANA-----------------------------------FTYSS 442
            ++A+E  FEM+N G   +                                     +Y++
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G    G+  +A +    M       +E  Y+ L+HG C  G++ +A  V+ +ML  G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P VV YS+++HGL       EA +L+  M  +    Q +++ YNI+LN L K + +  
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNM--ITSGKQWNIWIYNIILNGLSKNNCVDE 641

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +  L  S+  +    ++ T NI + AL
Sbjct: 642 AFKLFQSLCSKDFQLEITTFNIMIGAL 668



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/548 (26%), Positives = 254/548 (46%), Gaps = 32/548 (5%)

Query: 134 VEEAIRLFHTMVDEFHCK-RTVKSFNSVLNVIIQ-EGLYHRALE------FYNHIVNAKH 185
           +++A++LF  ++   H +  +V +FN +L  + +  G      E       +N ++    
Sbjct: 30  LDDALKLFDGLLT--HARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECT 87

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + + P+  T++++I   CR+G +++    F  +       +      L+ GLC   RL E
Sbjct: 88  IKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCE 147

Query: 246 AV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF---LKGCLPNEVTYN 301
           A+ +L+  M   GC P  V++N L+ G C       A +L+  M     + C PN V+Y 
Sbjct: 148 AMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEE 360
            +I+G   +G +DKA +L   M+     PN VTY T+I+GL K  + VD A  V   M +
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK-AQVVDRAEGVFQQMID 266

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    +   Y+ LI G    GK ++ +++ ++M   G KP+   Y +L++ LC  G+  E
Sbjct: 267 KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCRE 326

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  +   MI  G   N   Y  L+ G+   G   +  ++   M +N    +   ++++  
Sbjct: 327 ARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFT 386

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
              +   + EA  ++ +M  +G  PDVV Y ++I  LC  G V++A+  FN+M+      
Sbjct: 387 AYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM--NEGV 444

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQD 598
            P++F +N L+  LC       + +    M+++G  PD+V  N  L  L  K ++   Q 
Sbjct: 445 APNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR 504

Query: 599 GTDFLNELAIR--LFKRQRTSGGF----------KIVEVMLQKFLSPQTSTWERVVQELC 646
             D +  +  R  +       GG           K ++VML   L P   T+  ++   C
Sbjct: 505 LIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYC 564

Query: 647 RPKRIQAA 654
           R  RI  A
Sbjct: 565 RAGRIDDA 572



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 213/429 (49%), Gaps = 8/429 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL-PNTLT 194
           EA  LF +M+     ++ +K   ++  ++I       AL   + ++N    N L P+   
Sbjct: 326 EARFLFDSMI-----RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHI 380

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           FN++     +  ++D A+ +F +M  +   PD+  Y  L+D LCK  R+D+AVL  ++M 
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +G  P    FN L+ GLC   +  +A +    M  +G  P+ V +NT++  LC KG + 
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA  L+D M      P  ++Y T+I G   +GR  + A+ L  M       +E+ Y+TL+
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G  + G+ +DA  ++++M+  G  P  V YS ++ GL    +  EA+E+   MI +G  
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N + Y+ ++ G  ++    +A ++++ +   +       ++++I  L + G+  +A  +
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHL 680

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           +  + S G  PDV  Y  +   L   G +EE   LF+ M   +  + P+    N L+  L
Sbjct: 681 FATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAM--EKSGTTPNSRMLNALVRRL 738

Query: 555 CKQSNISHS 563
             + +I+ +
Sbjct: 739 LHRGDITRA 747



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/431 (26%), Positives = 197/431 (45%), Gaps = 41/431 (9%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR-----AAKLVDNMF---LKGCL 294
           LD+A+ L D +       + + FN L+  + +    GR      ++LV ++F   ++ C 
Sbjct: 30  LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVS--GRRSSTTESELVVSLFNRMIRECT 87

Query: 295 ----PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
               P+  TY+ LI   C  G L+   +    ++ S    N +    ++ GL    R  +
Sbjct: 88  IKVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCE 147

Query: 351 GARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME---KGCKPNTVVYS 406
              +L+  M E     +   Y+TL+ G   E +AE+A++L   M +   + C PN V Y+
Sbjct: 148 AMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYA 207

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            +I+G    G+ D+A  +  EM++ G   N  TY++++ G  ++    +A  +++ M   
Sbjct: 208 IVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDK 267

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               +   Y+ LIHG    GK +E   +  +M + G KPD   Y S+++ LCN G   EA
Sbjct: 268 GVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREA 327

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             LF+ M+      +P+V  Y IL++    +  +S   DLLN M++ G  PD    NI  
Sbjct: 328 RFLFDSMI--RKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIF 385

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
           TA  +K    +         A+ +F + +  G            LSP    +  ++  LC
Sbjct: 386 TAYAKKAMIDE---------AMHIFNKMKQQG------------LSPDVVNYGALIDALC 424

Query: 647 RPKRIQAAINK 657
           +  R+  A+ K
Sbjct: 425 KLGRVDDAVLK 435



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 96/438 (21%), Positives = 165/438 (37%), Gaps = 68/438 (15%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM---- 144
           LI  YA  G    +  +L  M           F  IF AY K  +++EA+ +F+ M    
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408

Query: 145 -----------VDEFHCK-----RTVKSFNSVLNVIIQEGLY---------------HRA 173
                      +D   CK       V  FN ++N  +   ++                +A
Sbjct: 409 LSPDVVNYGALIDAL-CKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKA 467

Query: 174 LEFYNHIVNA--------------------------------KHMNILPNTLTFNLVIKT 201
            EFY  ++N                                 + +   P  +++  +I  
Sbjct: 468 KEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGG 527

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C +G +D A +    M     +PD +TY TL+ G C+  R+D+A  +  EM  +G  P 
Sbjct: 528 HCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPG 587

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT++ +++GL        A +L  NM   G   N   YN +++GL     +D+A  L  
Sbjct: 588 VVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQ 647

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            + +        T+  +I  L K GR  D   +  ++       + + Y  +   L +EG
Sbjct: 648 SLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEG 707

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             E+   L+  M + G  PN+ + +AL+  L   G    A   L ++     +  A T +
Sbjct: 708 YLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTA 767

Query: 442 SLMKGFFESGKGHKAVEI 459
            L+         H A  +
Sbjct: 768 MLISLLSRDEYHHHATSL 785


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/401 (31%), Positives = 212/401 (52%), Gaps = 3/401 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+   +N VI   C+   +++A  +   M  +   PD+ T+  ++   C + ++D A+ +
Sbjct: 42  PDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKV 101

Query: 250 LDEMQVDG-CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
            +E+  D  C PT +T+ +LI      G +  A KL+D M  +G  P+  TYN +  GLC
Sbjct: 102 FEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLC 161

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +G +D+A   +  + +  C P+ +TY  ++  L+  G+  +G + +  +  R    N  
Sbjct: 162 KEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVV 221

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YS LIS L ++GK E+++ L K M EKG  P+   Y  LI   CR GK D A E L  M
Sbjct: 222 TYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCM 281

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I +G   +   Y+++M    ++G G  AVEI+  + +  C  N   Y+ ++  L   G  
Sbjct: 282 ICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDR 341

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  + +QMLS+G  PDV+ Y+S+I  LC  G V+EA+ L  +ML    + QP++ +Y 
Sbjct: 342 YRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADML--SGRFQPNIVSYK 399

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +L  LCK   I  +I++L +M++ GC P+  T  + +  +
Sbjct: 400 TVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 237/448 (52%), Gaps = 8/448 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K +  +  +++A R+   +  E H K  V ++N+V++   +      A    + +   
Sbjct: 16  LIKGFFNSRNIDKATRVMGIL--EKHGKPDVFAYNAVISGFCKANRIESAKTVLDRM--- 70

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENR 242
           K     P+ +T N++I T C  G +D A+++F E+    NC+P + TY  L++    E  
Sbjct: 71  KRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGG 130

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           +DEA+ LLDEM   G  P   T+NV+  GLCK G++ RA + V  +  +GC P+ +TYN 
Sbjct: 131 IDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNI 190

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           L+  L  +G  D+    +  + +  C PN VTY  +I+ L + G+  +   ++  M+E+ 
Sbjct: 191 LLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKG 250

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              + Y Y  LI+   +EGK + A++    M+  G  P+ V Y+ ++  LC+ G  D A 
Sbjct: 251 LTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAV 310

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           EI  ++   GC  N  +Y++++   + SG  ++A+ +   M       + + Y+ LI  L
Sbjct: 311 EIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCL 370

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C DG + EA  +   MLS   +P++V+Y +++ GLC A  +++A+++   M  +E   QP
Sbjct: 371 CRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAM--IENGCQP 428

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSM 570
           +  TY +L+  +    + + +++L NS+
Sbjct: 429 NETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 222/460 (48%), Gaps = 44/460 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
            + ++I  +  +   +S + VL RM+R+     VV     I  F   GK  L   A+++F
Sbjct: 46  AYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDL---ALKVF 102

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             ++ + +CK T+ ++  ++   I EG    AL+  + +++     + P+T T+N++ + 
Sbjct: 103 EELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSR---GLEPDTFTYNVITRG 159

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+ G VD A +  R +  R C+PD+ TY  L+  L  + + DE    + E+   GC P 
Sbjct: 160 LCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPN 219

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+++LI+ LC++G++  +  LV  M  KG  P+   Y+ LI   C +G LD A+  LD
Sbjct: 220 VVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLD 279

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M+    +P+ V Y TI+                                   + L K G
Sbjct: 280 CMICDGFLPDIVNYNTIM-----------------------------------AALCKNG 304

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             + A++++ ++ E GC PN   Y+ ++  L   G    A  ++ +M++ G   +  TY+
Sbjct: 305 NGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYN 364

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           SL+      G   +A+ +  DM       N V Y  ++ GLC+  ++ +A  V   M+  
Sbjct: 365 SLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIEN 424

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           GC+P+   Y+ +I G+  +GS  +A++L N +  +   S+
Sbjct: 425 GCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISE 464



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 198/439 (45%), Gaps = 60/439 (13%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M  ++ +PD+     L+ G      +D+A  ++  ++  G  P    +N +I+G CK   
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANR 59

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA-SKCMPNEVTYG 336
           +  A  ++D M  KG  P+ VT+N +I   C KG +D A+ + + ++  + C P  +TY 
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITY- 118

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
                                             + LI     EG  ++A+KL  +M+ +
Sbjct: 119 ----------------------------------TILIEAYILEGGIDEALKLLDEMLSR 144

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G +P+T  Y+ +  GLC+ GK D A E +  + + GC  +  TY+ L++     GK  + 
Sbjct: 145 GLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEG 204

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            +   ++    C  N V YS+LI  LC DGK+ E+  +   M  +G  PD   Y  +I  
Sbjct: 205 EKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAA 264

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C  G ++ A++  + M+C      PD+  YN ++ ALCK  N  H++++   + + GC 
Sbjct: 265 FCREGKLDMAIEFLDCMIC--DGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCP 322

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           P++ + N  L+AL    +                  R R  G   ++  ML K + P   
Sbjct: 323 PNVSSYNTMLSALWSSGD------------------RYRALG---MISQMLSKGIDPDVI 361

Query: 637 TWERVVQELCRPKRIQAAI 655
           T+  ++  LCR   +  AI
Sbjct: 362 TYNSLISCLCRDGMVDEAI 380


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 236/455 (51%), Gaps = 6/455 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  AY +  L+ EA  + ++M  +   K T+ ++N+V+N + ++G Y RA   +N +++ 
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGK-GLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLS- 283

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
             + + P+T T+N ++   CR      A  +F +M  R   PD+ ++ +L+    +   L
Sbjct: 284 --IGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHL 341

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A++   +M+  G  P  V + +LING C+NG +  A ++ D M  +GC  + V YNT+
Sbjct: 342 DQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTI 401

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++GLC K  L  A +L D MV    +P+  T+ T+I+G  K G       +   M ++  
Sbjct: 402 LNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNI 461

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+ LI G  K  + E A +LW +M+ +   PN + Y+ L++G C +G   EA  
Sbjct: 462 KPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFR 521

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EMI  G      T ++++KG+  SG   KA E    M       + + Y+ LI+G  
Sbjct: 522 LWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFV 581

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           +   + +A  +  +M ++G +PDVV Y+ +++G C  G ++EA  +  +M+  E    PD
Sbjct: 582 KGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMI--ERGIDPD 639

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             TY  L+N    Q N+  +    + M+ RG  PD
Sbjct: 640 RSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/429 (32%), Positives = 217/429 (50%), Gaps = 7/429 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + ++N+++N   +EGL   A E  N +       + P   T+N VI  +C+ G    A  
Sbjct: 220 IVTYNTLINAYCREGLLGEAFEVMNSMSGK---GLKPTLFTYNAVINGLCKKGRYVRAKG 276

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F EM      PD  TY TL+   C+ N   EA  +  +M   G  P  ++F+ LI    
Sbjct: 277 VFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSS 336

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           +NG L +A     +M   G +P+ V Y  LI+G C  G + +A+ + D+M+   C  + V
Sbjct: 337 RNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVV 396

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            Y TI+NGL K     D   +   M ER    +   ++TLI G  KEG    A+ L+  M
Sbjct: 397 AYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIM 456

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            +K  KP+ V Y+ LIDG C+  + ++A E+  EMI+     N  +Y+ L+ G+   G  
Sbjct: 457 TQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFV 516

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A  +W +M +       V  + +I G C  G L +A     +M+S G  PD + Y+++
Sbjct: 517 SEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTL 576

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           I+G      +++A  L N+M   E K  QPDV TYN++LN  C+Q  +  +  +L  M++
Sbjct: 577 INGFVKGEYMDKAFFLINKM---ETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIE 633

Query: 573 RGCDPDLVT 581
           RG DPD  T
Sbjct: 634 RGIDPDRST 642



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/570 (25%), Positives = 268/570 (47%), Gaps = 39/570 (6%)

Query: 98  DFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI-------RLFHTMVDEFHC 150
           D ++L + + R     RV + +S I +    G  +LV + +       R  +   D F  
Sbjct: 81  DAQTLILRMIRRSGVSRVEIVESLISMSSTCGVDNLVFDLLIRSYVQARKLNEGTDTFKI 140

Query: 151 KR------TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            R      ++ + NS+L  +++ G    A E YN I  +    I  N  T N+++  +C+
Sbjct: 141 LRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARS---GIELNVYTLNIMVNALCK 197

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D+      +M  +    DI TY TL++  C+E  L EA  +++ M   G  PT  T
Sbjct: 198 DHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFT 257

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N +INGLCK G   RA  + + M   G  P+  TYNTL+   C   N  +A  +   M+
Sbjct: 258 YNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDML 317

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ +++ ++I    + G           M+      +  IY+ LI+G  + G   
Sbjct: 318 HRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMS 377

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+++  +M+E+GC  + V Y+ +++GLC+     +A  +  EM+  G   +  T+++L+
Sbjct: 378 EALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLI 437

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  + G   KA+ ++  M + N   + V Y++LI G C+  ++ +A  +W +M+SR   
Sbjct: 438 HGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIF 497

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P+ ++Y+ +++G CN G V EA +L++EM  +    +P + T N ++   C+  ++S + 
Sbjct: 498 PNHISYAILVNGYCNLGFVSEAFRLWDEM--IRKGIKPTLVTCNTVIKGYCRSGDLSKAD 555

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
           + L  M+  G  PD +T N  +                         K +     F ++ 
Sbjct: 556 EFLGKMISEGVGPDSITYNTLING---------------------FVKGEYMDKAFFLIN 594

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            M  K L P   T+  ++   CR  R+Q A
Sbjct: 595 KMETKGLQPDVVTYNVILNGFCRQGRMQEA 624



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 120/249 (48%), Gaps = 6/249 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHT 143
           TF +LI  +   G+     + L+ +  +K +  +  ++  +   + K   +E+A  L++ 
Sbjct: 432 TFTTLIHGHCKEGNMGK-ALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNE 490

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+        + S+  ++N     G    A   ++ ++      I P  +T N VIK  C
Sbjct: 491 MISRKIFPNHI-SYAILVNGYCNLGFVSEAFRLWDEMIRK---GIKPTLVTCNTVIKGYC 546

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G +  A +   +M      PD  TY TL++G  K   +D+A  L+++M+  G  P  V
Sbjct: 547 RSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVV 606

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+NV++NG C+ G +  A  ++  M  +G  P+  TY TLI+G   + NL +A    D M
Sbjct: 607 TYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEM 666

Query: 324 VASKCMPNE 332
           +    +P++
Sbjct: 667 LQRGFVPDD 675


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/454 (30%), Positives = 233/454 (51%), Gaps = 6/454 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV ++N ++  + +EG    A   +  +   K M + P+ +T+N +I    ++GL+D ++
Sbjct: 131 TVFTYNIMIGHVCKEGDMLTARSLFEQM---KKMGLTPDIVTYNTLIDGYGKIGLLDESV 187

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            LF EM    CEPD+ TY  L++  CK   +  A     EM+     P  ++++ LI+ L
Sbjct: 188 CLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDAL 247

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G +  A K   +M   G LPNE TY++LI   C  GNL +A  L D M+      N 
Sbjct: 248 CKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNI 307

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY T+++GL + G   +   +  +M +     N   Y+ LI G  K    + AM+L+ +
Sbjct: 308 VTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNE 367

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M EK  KP+ +++  ++ GLC   K +E + I+ EM  +G  AN   Y++LM  +F++G 
Sbjct: 368 MREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGN 427

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A+ + ++M         V +  LI GLC+ G ++EA   + +M     +P+V  Y++
Sbjct: 428 RTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTA 487

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I GLC    + +A KLF+EM   +    PD   Y  +++   K  N   ++++ N MM+
Sbjct: 488 LIDGLCKNNCIGDAKKLFDEM--QDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMME 545

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            G + DL      +  L +  +  Q    FL E+
Sbjct: 546 MGIELDLYAYTSLVWGLSQCGQV-QQARKFLAEM 578



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 138/490 (28%), Positives = 246/490 (50%), Gaps = 6/490 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I H    GD  +   +  +M++        ++  +   YGK  L++E++ LF  M
Sbjct: 134 TYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEM 193

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                C+  V ++N+++N   +     RA EF+  +   K  ++ PN ++++ +I  +C+
Sbjct: 194 -KFMGCEPDVITYNALINSFCKFKGMLRAFEFFREM---KDKDLKPNVISYSTLIDALCK 249

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G++  AI+ F +M      P+ +TY +L+D  CK   L EA +L DEM  +      VT
Sbjct: 250 EGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVT 309

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L++GLC+ G +  A +L   M   G  PN   Y  LIHG     ++DKA+ L + M 
Sbjct: 310 YTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMR 369

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ + +GTI+ GL    +  +   ++  M+E     N  IY+TL+   FK G   
Sbjct: 370 EKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRT 429

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ L ++M + G +   V + ALIDGLC+ G   EA      M ++    N   Y++L+
Sbjct: 430 EAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALI 489

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  ++     A +++ +M   N + +++ Y+ +I G  + G  +EA  +  +M+  G +
Sbjct: 490 DGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIE 549

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D+ AY+S++ GL   G V++A K   EM  +     PD      LL    +  NI  +I
Sbjct: 550 LDLYAYTSLVWGLSQCGQVQQARKFLAEM--IGKGIIPDETLCTRLLRKHYELGNIDEAI 607

Query: 565 DLLNSMMDRG 574
           +L N ++++G
Sbjct: 608 ELQNELVEKG 617



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 190/393 (48%), Gaps = 2/393 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P    F+ +   +  LG+++ A Q F  M      P   +    +  L K    D +  
Sbjct: 59  VPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRD 118

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
              +M   G  PT  T+N++I  +CK G++  A  L + M   G  P+ VTYNTLI G  
Sbjct: 119 FFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYG 178

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G LD++V L + M    C P+ +TY  +IN   K    +        M+++    N  
Sbjct: 179 KIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVI 238

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YSTLI  L KEG  + A+K +  M   G  PN   YS+LID  C+ G   EA  +  EM
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +      N  TY++L+ G  E G  ++A E+++ M K     N   Y+ LIHG  +   +
Sbjct: 299 LQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSM 358

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A  ++ +M  +  KPD++ + +++ GLC+   +EE   +  EM      + P ++T  
Sbjct: 359 DKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYT-- 416

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            L++A  K  N + +I+LL  M D G +  +VT
Sbjct: 417 TLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVT 449



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 191/397 (48%), Gaps = 14/397 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++ +LI      G  +        M R   +  E ++  +  A  KA  + EA  L   M
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E H    + ++ ++L+ + +EG+ + A E +  +  A    + PN   +  +I    +
Sbjct: 299 LQE-HVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKA---GVTPNLQAYTALIHGHIK 354

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +  +D A++LF EM  ++ +PDI  + T++ GLC E++L+E  +++ EM+  G    PV 
Sbjct: 355 VRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVI 414

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L++   K G    A  L++ M   G     VT+  LI GLC +G + +A+    RM 
Sbjct: 415 YTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMP 474

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PN   Y  +I+GL K     D  ++   M+++    ++  Y+ +I G  K G  +
Sbjct: 475 DHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQ 534

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ +  +MME G + +   Y++L+ GL + G+  +A + L EMI  G   +    + L+
Sbjct: 535 EALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLL 594

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           +  +E G   +A+E+           NE+    LIHG
Sbjct: 595 RKHYELGNIDEAIEL----------QNELVEKGLIHG 621



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 87/218 (39%), Gaps = 19/218 (8%)

Query: 453 GHKAVEI-WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           G    EI W    +N CV     +  L   L E G L  A   + +M      P   + +
Sbjct: 44  GSDVFEILWT--TRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCN 101

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           + +H L  AG  + +   F +M+       P VFTYNI++  +CK+ ++  +  L   M 
Sbjct: 102 AFLHRLSKAGEGDLSRDFFRDMV--GAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMK 159

Query: 572 DRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDFL--NELAIRLFKRQRTS 617
             G  PD+VT N  +              L E+++      D +  N L     K +   
Sbjct: 160 KMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGML 219

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             F+    M  K L P   ++  ++  LC+   +Q AI
Sbjct: 220 RAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAI 257


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 229/443 (51%), Gaps = 17/443 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +     KA  + EA+  ++ M+ E HC   ++  N +L  + Q G   +A+  +  
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQML-ERHCVPNLRDINLLLASLCQAGTMDQAMAIFRG 63

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMDGL 237
           I         P+ +T N++I   C L L+D A++LF EM  +N    P+  TY  ++   
Sbjct: 64  I------QCSPSVITLNILINGFCELQLLDKALELFHEME-KNFALVPEATTYTAIIKCY 116

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF-LKGCLPN 296
           CK +RLD+A  LL+E     C    +    +  G CK   +  A +L+ +M   K   P+
Sbjct: 117 CKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            V +N +IHG C  G + +A  +L+ +V+  C+PN VTY T+I+G  K G   +  ++  
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234

Query: 357 SMEERKFHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
            +  R  H   N   ++ LISGL K  + E A +L KQM  +  + +T  Y+ L+DGLC+
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G+  E   +  EM+  GC  +  TY++L+    ++G    A ++ + M       +   
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTT 354

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+VL+ GL E+GK+R A   + ++L   C P  V YS+++ G C A  V+EA+K + EM 
Sbjct: 355 YTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM- 413

Query: 535 CLEPKSQPDVFTYNILLNALCKQ 557
            L+ +  PD  T  +L+  LCK+
Sbjct: 414 -LDRRLAPDPATCKLLVEMLCKR 435



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 216/406 (53%), Gaps = 13/406 (3%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            +  +  +A  +++A+ +F  +     C  +V + N ++N   +  L  +ALE ++ +  
Sbjct: 43  LLLASLCQAGTMDQAMAIFRGI----QCSPSVITLNILINGFCELQLLDKALELFHEM-- 96

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            K+  ++P   T+  +IK  C++  +D A QL  E     C  D+    ++  G CK  R
Sbjct: 97  EKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQR 154

Query: 243 LDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +DEA  LLLD ++     P  V +NV+I+G CK G +  A ++++ +   GC+PN VTY 
Sbjct: 155 VDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYT 214

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASK---CMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TLI G C  GNL +A+ L  ++++S+     PN VT+  +I+GL K  R      ++  M
Sbjct: 215 TLIDGFCKSGNLSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM 273

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           + R    + + Y+TL+ GL K+G+  +  +++++M+ +GC P+ V Y+ L+   C+ G  
Sbjct: 274 KARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSL 333

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            +A++++  M+  G   +  TY+ L++G FE+GK   A E ++ + +  C    V YS L
Sbjct: 334 QDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSAL 393

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           + G C+   + EA   + +ML R   PD      ++  LC  G  +
Sbjct: 394 VRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 228/466 (48%), Gaps = 34/466 (7%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  TF+++I  +C+ G +  A++ + +M  R+C P++     L+  LC+   +D+A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLC 308
              +Q   C P+ +T N+LING C+   L +A +L   M     L P   TY  +I   C
Sbjct: 61  FRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
               LD+A  LL+   +S C  + +   ++  G  K  R  +  ++L+ M E+K    + 
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 369 I-YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + ++ +I G  K G+  +A ++ + ++  GC PN V Y+ LIDG C+ G   EA + LF+
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQ-LFK 234

Query: 428 MI---NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           ++   ++    N  T+++L+ G  ++ +   A E+ K M   +   +   Y+ L+ GLC+
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G+  E   V+ +ML  GC P VV Y++++H  C AGS+++A ++   M  +     PDV
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSM--VAKGIPPDV 352

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            TY +LL  L +   +  + +    ++   C P    C +  +AL               
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRERCPP----CAVVYSALVRG------------ 396

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                  K        K    ML + L+P  +T + +V+ LC+  R
Sbjct: 397 -----CCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 194/396 (48%), Gaps = 61/396 (15%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   TF+VLI GLCK G LG A +  + M  + C+PN    N L+  LC  G +D+A+++
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              +   +C P+ +T   +ING  +L + +D A  L    E+ F +              
Sbjct: 61  FRGI---QCSPSVITLNILINGFCEL-QLLDKALELFHEMEKNFAL-------------- 102

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
                               P    Y+A+I   C++ + D+A ++L E  ++ C+++   
Sbjct: 103 -------------------VPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIA 141

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMA-KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            +S+ +GF ++ +  +A ++  DM  K +   + V ++V+IHG C+ G++REA  +   +
Sbjct: 142 ITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETL 201

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +S GC P+ V Y+++I G C +G++ EAL+LF  +   +  ++P+V T+N L++ LCK  
Sbjct: 202 VSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKAD 261

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            + H+ +L+  M  R    D  T    +           DG          L K+ RTS 
Sbjct: 262 RLEHAFELVKQMKARDLRADTFTYTTLM-----------DG----------LCKQGRTSE 300

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             ++ E ML++  +P   T+  +V   C+   +Q A
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDA 336


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 225/425 (52%), Gaps = 5/425 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V + N +L++ ++     +A   Y  +     M I  + +TFN++I  +C+ G +  A +
Sbjct: 156 VHACNDMLSLFLKSNRTEKAWVLYAEMF---RMRIKSSVVTFNIMINVLCKEGKLKKAKE 212

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
               M     +P++ TY T++ G C   R++ A ++ D M+  G  P   T+   I+G+C
Sbjct: 213 FIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMC 272

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G+L  A+ +++ M   G  P  VTYNTLI G C KGNL+ A    D+MV    MP   
Sbjct: 273 KEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVS 332

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+ L    +  +   ++  M E+    +   Y+ LI+G  + G  + A  L  +M
Sbjct: 333 TYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEM 392

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + KG +P  V Y++LI  L + G+  +A+++  +++  G   +   +++L+ G   +G  
Sbjct: 393 ISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNM 452

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A  + K+M +   V +EV ++ L+ G C +GK+  AR +  +M SRG KPD ++Y+++
Sbjct: 453 DRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTL 512

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I G    G +++A ++ +EML +     P + TYN L+  LCK     H+  LL  M+ +
Sbjct: 513 ISGYSKRGDMKDAFRVRDEMLSI--GFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISK 570

Query: 574 GCDPD 578
           G  P+
Sbjct: 571 GITPN 575



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/405 (33%), Positives = 215/405 (53%), Gaps = 4/405 (0%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K++  E+A  L+  M      K +V +FN ++NV+ +EG   +A EF   I   + + I 
Sbjct: 168 KSNRTEKAWVLYAEMF-RMRIKSSVVTFNIMINVLCKEGKLKKAKEF---IGLMEALGIK 223

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T+N +I   C  G V+ A  +F  M  R  +PD YTY + + G+CKE +L+EA  +
Sbjct: 224 PNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGM 283

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L++M+  G  PT VT+N LI+G C  G L  A    D M  +G +P   TYN LIH L L
Sbjct: 284 LEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFL 343

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              +D+A  ++  M     +P+ VTY  +ING  + G       +   M  +        
Sbjct: 344 DCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVT 403

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++LI  L K G+ + A  L+++++ KG  P+ ++++ALIDG C  G  D A  +L EM 
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                 +  T+++LM+G    GK   A E+ ++M       + + Y+ LI G  + G ++
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           +A  V  +MLS G  P ++ Y+++I GLC     + A +L  EM+
Sbjct: 524 DAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMI 568



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 237/488 (48%), Gaps = 24/488 (4%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +L   I  G+Y    E +N +  A+ +  +   + ++L+I+  C L   D+A + F  M 
Sbjct: 90  LLKETINSGVY-SIREVFNELGVARGVLGIKTYVLYDLLIRACCELKRGDDAFECFDMMK 148

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
            +   P ++    ++    K NR ++A +L  EM       + VTFN++IN LCK G+L 
Sbjct: 149 GKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLK 208

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           +A + +  M   G  PN VTYNT+IHG C +G ++ A  + D M      P+  TYG+ I
Sbjct: 209 KAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFI 268

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +G+ K G+  + + +L  M+E         Y+TLI G   +G  E A     +M+ +G  
Sbjct: 269 SGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLM 328

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P    Y+ LI  L    K DEA+ I+ EM   G   ++ TY+ L+ G+   G   KA  +
Sbjct: 329 PTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTL 388

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
             +M         V Y+ LI+ L + G++++A  ++ +++ +G  PD++ ++++I G C 
Sbjct: 389 HDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCA 448

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G+++ A  +  EM   + K  PD  T+N L+   C++  +  + +L+  M  RG  PD 
Sbjct: 449 NGNMDRAFAMLKEM--DQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDH 506

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
           ++ N  ++                        KR      F++ + ML    +P   T+ 
Sbjct: 507 ISYNTLISGYS---------------------KRGDMKDAFRVRDEMLSIGFNPTLLTYN 545

Query: 640 RVVQELCR 647
            ++Q LC+
Sbjct: 546 ALIQGLCK 553



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 174/365 (47%), Gaps = 37/365 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ ++I  Y + G  +   M+   M+   R V   S+ +        K   +EEA  +  
Sbjct: 228 TYNTIIHGYCSRGRVEGARMIFDLMK--CRGVKPDSYTYGSFISGMCKEGKLEEASGMLE 285

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------------YNHIVNAKHMN 187
            M  E   + T  ++N++++    +G    A ++               YN +++A  ++
Sbjct: 286 KM-KEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLD 344

Query: 188 -----------------ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
                            ++P+++T+N++I   CR G V  A  L  EM  +  +P   TY
Sbjct: 345 CKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTY 404

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +L+  L K  R+ +A  L +++   G FP  + FN LI+G C NG + RA  ++  M  
Sbjct: 405 TSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQ 464

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
              +P+EVT+NTL+ G C +G ++ A  L++ M +    P+ ++Y T+I+G  K G   D
Sbjct: 465 MKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKD 524

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
             RV   M    F+     Y+ LI GL K  + + A +L K+M+ KG  PN   Y +LI+
Sbjct: 525 AFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIE 584

Query: 411 GLCRV 415
           G+  V
Sbjct: 585 GIGNV 589


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 242/459 (52%), Gaps = 13/459 (2%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ LF  MV E     ++  F  +LNVI +   +   +    H+   + M +  +  T 
Sbjct: 54  EALDLFSHMV-ESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHL---QIMGVSNDLYTC 109

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           NL++   C+      A     ++     EPDI+T+ +L++G C  NR++EA+ ++++M  
Sbjct: 110 NLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVE 169

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P  V +  +I+ LCKNG +  A  L + M   G  P+ V Y +L++GLC  G    
Sbjct: 170 MGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRD 229

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  LL  M+  K  P+ +T+  +I+  VK G+ +D   +   M +     N + Y++LI+
Sbjct: 230 ADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLIN 289

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL  EG+ ++A +++  M  KGC P+ V Y++LI+G C+  K ++A +I +EM   G   
Sbjct: 290 GLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG 349

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  TY++L++GF   GK + A E++  M       N   Y+VL+H LC +GK+ +A M++
Sbjct: 350 NTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIF 409

Query: 496 TQMLSR---GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL- 551
             M  R   G  P++  Y+ ++HGLC  G +E+AL +F +M     K   D+      + 
Sbjct: 410 EDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDM----QKRDMDIGIITYTII 465

Query: 552 -NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              +CK   +  +++L  S+  +G  P++VT    ++ L
Sbjct: 466 IQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGL 504



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 219/418 (52%), Gaps = 8/418 (1%)

Query: 164 IIQEGL----YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           I++ GL    ++ AL+ ++H+V ++    LP+ + F  ++  + ++   D  I L + + 
Sbjct: 42  ILRNGLHSLQFNEALDLFSHMVESRP---LPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
           +     D+YT   LM+  C+ ++   A   L ++   G  P   TF  LING C    + 
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  +V+ M   G  P+ V Y T+I  LC  G++D A+SL ++M      P+ V Y +++
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           NGL   GR  D   +L  M +RK   +   ++ LI    KEGK  DA +L+ +M++    
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN   Y++LI+GLC  G+ DEA ++ + M   GC  +   Y+SL+ GF +  K   A++I
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKI 338

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           + +M++     N + Y+ LI G    GK   A+ V+  M+SRG  P++  Y+ ++H LC 
Sbjct: 339 FYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCY 398

Query: 520 AGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            G V +AL +F +M   E     P++ TYN+LL+ LC    +  ++ +   M  R  D
Sbjct: 399 NGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMD 456



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/381 (33%), Positives = 202/381 (53%), Gaps = 6/381 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F S++N          A+   N +V    M I P+ + +  +I ++C+ G VDNA+ LF
Sbjct: 143 TFTSLINGFCLGNRIEEAMSMVNQMV---EMGIKPDVVIYTTIIDSLCKNGHVDNALSLF 199

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M      PD+  Y +L++GLC   R  +A LLL  M      P  +TFN LI+   K 
Sbjct: 200 NQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKE 259

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A +L + M      PN  TY +LI+GLC++G LD+A  +   M    C P+ V Y
Sbjct: 260 GKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAY 319

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++ING  K  +  D  ++   M ++    N   Y+TLI G    GK   A +++  M+ 
Sbjct: 320 TSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVS 379

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN---NGCAANAFTYSSLMKGFFESGK 452
           +G  PN   Y+ L+  LC  GK ++A  I  +M     +G   N  TY+ L+ G   +GK
Sbjct: 380 RGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGK 439

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             KA+ ++ DM K +     + Y+++I G+C+ GK+++A  ++  + S+G KP+VV Y++
Sbjct: 440 LEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTT 499

Query: 513 MIHGLCNAGSVEEALKLFNEM 533
           MI GL   G + EA  LF +M
Sbjct: 500 MISGLFREGLMLEAHVLFRKM 520



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/414 (28%), Positives = 201/414 (48%), Gaps = 15/414 (3%)

Query: 60  KSEQP-FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFK-SLEMV--LYRMRREKRV 115
           +S QP  +        KLG ++    TF SLI  +      + ++ MV  +  M  +  V
Sbjct: 118 QSSQPCLASSFLGKLMKLG-FEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDV 176

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           V+   +  I  +  K   V+ A+ LF+ M + +  +  V  + S++N +   G +  A  
Sbjct: 177 VI---YTTIIDSLCKNGHVDNALSLFNQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
               ++  K   I P+ +TFN +I    + G + +A +L+ EM   +  P+I+TY +L++
Sbjct: 233 LLRGMMKRK---IKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLIN 289

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           GLC E RLDEA  +   M+  GCFP  V +  LING CK  ++  A K+   M  KG   
Sbjct: 290 GLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG 349

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N +TY TLI G  L G  + A  +   MV+    PN  TY  +++ L   G+      + 
Sbjct: 350 NTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIF 409

Query: 356 MSMEERKFH---VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
             M++R+      N   Y+ L+ GL   GK E A+ ++  M ++      + Y+ +I G+
Sbjct: 410 EDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGM 469

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           C+ GK  +A  +   + + G   N  TY++++ G F  G   +A  +++ M ++
Sbjct: 470 CKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKED 523



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 6/287 (2%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K  V +FN++++  ++EG    A E YN ++    M+I PN  T+  +I  +C  G +D 
Sbjct: 243 KPDVITFNALIDAFVKEGKLLDAKELYNEMI---QMSIAPNIFTYTSLINGLCMEGRLDE 299

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A Q+F  M  + C PD+  Y +L++G CK  ++++A+ +  EM   G     +T+  LI 
Sbjct: 300 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQ 359

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK--- 327
           G    G+   A ++  +M  +G  PN  TYN L+H LC  G ++KA+ + + M   +   
Sbjct: 360 GFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDG 419

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN  TY  +++GL   G+      V   M++R   +    Y+ +I G+ K GK +DA+
Sbjct: 420 VPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDAL 479

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            L+  +  KG KPN V Y+ +I GL R G   EA  +  +M  +G +
Sbjct: 480 NLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 142/311 (45%), Gaps = 30/311 (9%)

Query: 346 GRAVDGARVL-MSMEERKF-HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           G+A+  +R+L +S   R F +  E + + L S  F E     A+ L+  M+E    P+ +
Sbjct: 18  GKALSFSRLLGLSFWVRAFCNYREILRNGLHSLQFNE-----ALDLFSHMVESRPLPSII 72

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            ++ L++ + ++ K D    +   +   G + + +T + LM  F +S +   A      +
Sbjct: 73  DFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKL 132

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            K     +   ++ LI+G C   ++ EA  +  QM+  G KPDVV Y+++I  LC  G V
Sbjct: 133 MKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHV 192

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           + AL LFN+M       +PDV  Y  L+N LC       +  LL  MM R   PD++T N
Sbjct: 193 DNALSLFNQME--NYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFN 250

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
             + A  ++ +   D  +  NE                    M+Q  ++P   T+  ++ 
Sbjct: 251 ALIDAFVKEGKL-LDAKELYNE--------------------MIQMSIAPNIFTYTSLIN 289

Query: 644 ELCRPKRIQAA 654
            LC   R+  A
Sbjct: 290 GLCMEGRLDEA 300


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 224/430 (52%), Gaps = 13/430 (3%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV ++ S++     +G  ++AL  Y+ +       I P+  TF  ++  + R GL+ +A+
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGK---GIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +LF EM   N +P+  TY  +++G C+E  + +A   L EM   G  P   ++  LI+GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C  G+   A   VD +    C  NE+ Y  L+HG C +G L++A+S+   MV      + 
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           V YG +I+G +K         +L  M +R    ++ IY+++I    K G  ++A  +W  
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS----LMKGFF 448
           M+ +GC PN V Y+A+I+GLC+ G  +EAE +  +M       N  TY      L KG  
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           +     KAVE+   + K   + N   Y++LI G C  G++ EA  + T+M+  G  PD +
Sbjct: 768 DM---QKAVELHNAILKG-LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y++MI+ LC    V++A++L+N M   E   +PD   YN L++  C    +  + +L N
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMT--EKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881

Query: 569 SMMDRGCDPD 578
            M+ +G  P+
Sbjct: 882 EMLRQGLIPN 891



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/517 (27%), Positives = 250/517 (48%), Gaps = 13/517 (2%)

Query: 70  FNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG 129
           F  +P L  Y        +LI        F   E++  RM +      + ++  +   + 
Sbjct: 361 FGVSPNLFVYN-------ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC 413

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +   ++ A+     MVD    K +V  +NS++N   + G    A  F   ++N K   + 
Sbjct: 414 RRGKLDTALSFLGEMVDT-GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK---LE 469

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +T+  ++   C  G ++ A++L+ EM  +   P IYT+ TL+ GL +   + +AV L
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            +EM      P  VT+NV+I G C+ G++ +A + +  M  KG +P+  +Y  LIHGLCL
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G   +A   +D +    C  NE+ Y  +++G  + G+  +   V   M +R   ++   
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y  LI G  K    +    L K+M ++G KP+ V+Y+++ID   + G   EA  I   MI
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           N GC  N  TY++++ G  ++G  ++A  +   M   + V N+V Y   +  L +     
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +  +     + +G   +   Y+ +I G C  G +EEA +L   M+       PD  TY  
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI--GDGVSPDCITYTT 827

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           ++N LC+++++  +I+L NSM ++G  PD V  N  +
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 241/522 (46%), Gaps = 52/522 (9%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+    + +++ + + G ++ A+ L + +      P+++ Y  L+D LCK  +  EA LL
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D M   G  P  VT+++LI+  C+ G+L  A   +  M   G   +   YN+LI+G C 
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G++  A   +  M+  K  P  VTY +++ G    G+     R+   M  +    + Y 
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++TL+SGLF+ G   DA+KL+ +M E   KPN V Y+ +I+G C  G   +A E L EM 
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   + ++Y  L+ G   +G+  +A      + K NC  NE+CY+ L+HG C +GKL 
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629

Query: 490 EARMVWTQMLSRGC-----------------------------------KPDVVAYSSMI 514
           EA  V  +M+ RG                                    KPD V Y+SMI
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
                 G  +EA  +++ M  +     P+  TY  ++N LCK   ++ +  L + M    
Sbjct: 690 DAKSKTGDFKEAFGIWDLM--INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLN-------------ELAIRLFKRQ-RTSGGF 620
             P+ VT   FL  L +     Q   +  N              + IR F RQ R     
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
           +++  M+   +SP   T+  ++ ELCR   ++ AI + W+++
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI-ELWNSM 848



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 226/488 (46%), Gaps = 48/488 (9%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
           +G   +   F  E+ ++  KL  Y      + SLI  +   GD  + E  +  M  +K  
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYP-----YNSLINGHCKFGDISAAEGFMAEMINKKLE 469

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
               ++  +   Y     + +A+RL+H M  +     ++ +F ++L+ + + GL   A++
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVK 528

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
            +N +      N+ PN +T+N++I+  C  G +  A +  +EM  +   PD Y+Y  L+ 
Sbjct: 529 LFNEMA---EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK------------ 283
           GLC   +  EA + +D +    C    + +  L++G C+ G+L  A              
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645

Query: 284 -----------------------LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
                                  L+  M  +G  P++V Y ++I      G+  +A  + 
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFK 379
           D M+   C+PNEVTY  +INGL K G  V+ A VL S M+      N+  Y   +  L K
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAG-FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764

Query: 380 -EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
            E   + A++L   ++ KG   NT  Y+ LI G CR G+ +EA E++  MI +G + +  
Sbjct: 765 GEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TY++++          KA+E+W  M +     + V Y+ LIHG C  G++ +A  +  +M
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883

Query: 499 LSRGCKPD 506
           L +G  P+
Sbjct: 884 LRQGLIPN 891



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 6/221 (2%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D  + S+I   + +GDFK    +   M  E  V  E ++  +     KA  V EA  L  
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQ-EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            M         V ++   L+++ + E    +A+E +N I+      +L NT T+N++I+ 
Sbjct: 742 KMQPVSSVPNQV-TYGCFLDILTKGEVDMQKAVELHNAILKG----LLANTATYNMLIRG 796

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            CR G ++ A +L   M      PD  TY T+++ LC+ N + +A+ L + M   G  P 
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            V +N LI+G C  GE+G+A +L + M  +G +PN  T  T
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 43/238 (18%)

Query: 139 RLFHTMVDEFHCKRTVKS----FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +LF  ++ E H  R +K     + S+++   + G +  A   ++ ++N      +PN +T
Sbjct: 664 KLFFGLLKEMH-DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE---GCVPNEVT 719

Query: 195 FNLVIKTVCRLGLVDNAIQLFREM-PVRN--------CEPDIYT---------------- 229
           +  VI  +C+ G V+ A  L  +M PV +        C  DI T                
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779

Query: 230 ----------YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                     Y  L+ G C++ R++EA  L+  M  DG  P  +T+  +IN LC+  ++ 
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +A +L ++M  KG  P+ V YNTLIHG C+ G + KA  L + M+    +PN  T  T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 259/540 (47%), Gaps = 42/540 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y  +G F+    +L R RR+  +    S+  I    G+   V+EA++ F  M
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      + ++N +++++ + G    AL   + + +A    + PN +T N+++  +C+
Sbjct: 402 KKD--AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDA---GLFPNVITVNIMVDRLCK 456

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D+A  +F  +  + C PD  TYC+L++GL +  R+DEA  L ++M      P  V 
Sbjct: 457 AQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVV 516

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI    K G      K+ + M   GC P+ +  NT +  +   G ++K  +L   + 
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+  +Y  +I+GLVK G A +   +  +M+E+   ++   Y+T+I G  K GK  
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636

Query: 385 DAMKLWKQMMEKGCKP-----------------------------------NTVVYSALI 409
            A +L ++M  KG +P                                   N V+YS+LI
Sbjct: 637 KAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  I+ E++  G   N +T++ L+    ++ +  +A+  ++ M    C 
Sbjct: 697 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCT 756

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N + YS+LIHGLC+  K  +A + W +M  +G KP+V  Y++MI GL  AG++ EA  L
Sbjct: 757 PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F +    E     D   YN ++  L   +  S +  L      +GC     TC + L +L
Sbjct: 817 FEKF--KEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSL 874



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 258/532 (48%), Gaps = 21/532 (3%)

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           + LF  M  E      V  F +++ V  +EG    AL   + +   K  ++ P+ + +N+
Sbjct: 220 LTLFQQM-QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM---KSNSLEPDVVLYNV 275

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
            I    + G VD A + F EM       D  TY +++  LCK +RL+EAV L + M  + 
Sbjct: 276 CIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P    +N +I G    G+   A  L++    KGC+P+ V+YN ++  L  KG +D+A+
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
              + M     +PN  TY  +I+ L K G+      V  +M++     N    + ++  L
Sbjct: 396 KKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRL 454

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K  + +DA  +++ +  K C+P+ V Y +LI+GL R G+ DEA ++  +M++     NA
Sbjct: 455 CKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNA 514

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             Y+SL++ FF+ G+     +I+ +M +  C  + +  +  +  + + G++ + R ++ +
Sbjct: 515 VVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQE 574

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           + + G  PD  +Y+ +IHGL  AG   EA +LF  M   E     D   YN +++  CK 
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK--EQGCVLDTRAYNTVIDGFCKS 632

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK--EKL--------EAPQDGTDF----L 603
             ++ +  LL  M  +G +P +VT    +  L   ++L        EA   G +      
Sbjct: 633 GKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIY 692

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           + L     K  R    + I+E ++QK L+P   TW  ++  L + + I  A+
Sbjct: 693 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEAL 744



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 202/432 (46%), Gaps = 39/432 (9%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +++A  +F  + D   C+    ++ S++  + + G    A + Y  +++A   N +
Sbjct: 456 KAQRLDDACSIFEGL-DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDA---NQI 511

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN + +  +I+   + G  ++  +++ EM    C PD+    T MD + K   +++   L
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             E++  G  P   ++ +LI+GL K G    A +L   M  +GC+ +   YNT+I G C 
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G ++KA  LL+ M      P  VTYG++I+GL K+ R  +   +    + +   +N  I
Sbjct: 632 SGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVI 691

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKG-------------------------------- 397
           YS+LI G  K G+ ++A  + +++M+KG                                
Sbjct: 692 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK 751

Query: 398 ---CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
              C PN + YS LI GLC++ K ++A     EM   G   N FTY++++ G  ++G   
Sbjct: 752 DLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIV 811

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A  +++   +   V +   Y+ +I GL    +  +A  ++ +   +GC         ++
Sbjct: 812 EADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLL 871

Query: 515 HGLCNAGSVEEA 526
             L  A  +E+A
Sbjct: 872 DSLHKAECIEQA 883



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 184/392 (46%), Gaps = 26/392 (6%)

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N L+  + +  +     ++++ M + G  P+  T   ++        L +A + +  M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGK 382
              K  P    Y  +I G +   R  D    L   M+E  + VN ++++TLI    +EG+
Sbjct: 192 RKLKFRPAFSAYTNLI-GALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A+ L  +M     +P+ V+Y+  ID   + GK D A +   EM  NG   +  TY+S
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++    ++ + ++AVE+++ M +N  V     Y+ +I G    GK  +A  +  +   +G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C P VV+Y+ ++  L   G V+EALK F EM   +  + P++ TYNI+++ LCK   +  
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEM---KKDAIPNLSTYNIMIDMLCKAGKLET 427

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           ++ + ++M D G  P+++T NI +                      RL K QR      I
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVD---------------------RLCKAQRLDDACSI 466

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            E +  K   P   T+  +++ L R  R+  A
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEA 498


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 162/610 (26%), Positives = 270/610 (44%), Gaps = 77/610 (12%)

Query: 114 RVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA 173
           R + ++ F  +     +  L   A+RLF  M        T  ++N+V+  + +     RA
Sbjct: 113 RPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARA 172

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN----------- 222
           L + + +V +      P+  TFN +I   CR   VD A  LF +MP+R            
Sbjct: 173 LRYLSLMVRS---GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATL 229

Query: 223 ----CE----------------PDIYTYCTLMDGLCKENRLDEAVLLLDEMQ-------- 254
               CE                PD++ Y  L+ GLC   R +E +L+L  M+        
Sbjct: 230 IEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPST 289

Query: 255 ------VD---------------------GCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
                 VD                     G  P  VT   +IN  CK G +  A ++++ 
Sbjct: 290 RAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLEL 349

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M L+GC PN  TYN L+ G C +G + KA++LL++M A    P+ VTY  +I G    G 
Sbjct: 350 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGH 409

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                R+L  ME      ++Y Y+ LI+ L K+G+ + A  L+  +  +G KPN V +++
Sbjct: 410 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 469

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI+GLC+ GK D A + L +M++ GC  + +TYSS ++   +     + +    +M + +
Sbjct: 470 LINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 529

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              + V Y+++IH L ++         W +M+S GC PDVV Y++ +   C  G + EA 
Sbjct: 530 VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 589

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            +  EM   +     D   YN L++         H++ +L  M      P+  T  I L 
Sbjct: 590 NVLMEM--SKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLR 647

Query: 588 AL-KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
            L + +L       D L      ++K    +  F + +VM +    P + T+  +++   
Sbjct: 648 HLVRMRLV-----EDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFS 702

Query: 647 RPKRIQAAIN 656
              R + A +
Sbjct: 703 EDGRTEEATS 712



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 256/563 (45%), Gaps = 73/563 (12%)

Query: 93  YANSGDFKSLEMVLYRMRREKRVVLEKSF-----------IFIFKAYGKAHLVEEAIRLF 141
           YA   DF+  E    R  +E   +L++ F             +  AY K   + +A+R+ 
Sbjct: 292 YAAVVDFRCRE----RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVL 347

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M     CK  V ++N+++     EG  H+A+   N +   +   + P+ +T+NL+I+ 
Sbjct: 348 ELMKLR-GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM---RACGVNPDAVTYNLLIRG 403

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C  G +++A +L R M       D YTY  L++ LCK+ R D+A  L D ++  G  P 
Sbjct: 404 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 463

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC-LKGN-------- 312
            VTFN LINGLCK+G+   A K ++ M   GC P+  TY++ I  LC +KG+        
Sbjct: 464 AVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIG 523

Query: 313 --LDKAV--------------------SLLDR----MVASKCMPNEVTYGTIINGLVKLG 346
             L K V                     L+ R    MV+S C P+ VTY T +      G
Sbjct: 524 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEG 583

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           R  +   VLM M +    V+   Y+TL+ G    G+ + A+ + KQM      PN   Y 
Sbjct: 584 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF 643

Query: 407 ALIDGLCR--------------VGKPDEAEEI--LFE-MINNGCAANAFTYSSLMKGFFE 449
            L+  L R              V K  E  ++  LF+ M  N    N+ TYSS+++GF E
Sbjct: 644 ILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 703

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G+  +A  +   M +++   NE  Y+ L+   C+  +  +A ++   M+  G  P +++
Sbjct: 704 DGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMS 763

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y  ++ GL   G  ++A ++F  M        PD   + ++++ L K+ +   S +++  
Sbjct: 764 YQHLLSGLICEGQTDKAKEIF--MNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIM 821

Query: 570 MMDRGCDPDLVTCNIFLTALKEK 592
           +    C P   T  +    L ++
Sbjct: 822 LERMNCRPSHQTYAMLTEELPDR 844



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 209/497 (42%), Gaps = 80/497 (16%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+Q + N G       +L +MR         ++  + +       +E A RL   M
Sbjct: 361 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 420

Query: 145 ------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
                  D++       ++N+++N + ++G   +A   ++ +   +   I PN +TFN +
Sbjct: 421 EGDGLIADQY-------TYNALINALCKDGRTDQACSLFDSL---ETRGIKPNAVTFNSL 470

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           I  +C+ G  D A +   +M    C PD YTY + ++ LCK     E +  + EM     
Sbjct: 471 INGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 530

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL----- 313
            P+ V + ++I+ L K    G  A+    M   GC P+ VTY T +   C++G L     
Sbjct: 531 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 590

Query: 314 ------------------------------DKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
                                         D AVS+L +M +   +PN+ TY  ++  LV
Sbjct: 591 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 650

Query: 344 KLGRAVDGARVLMS------------------MEERKFHVNEYIYSTLISGLFKEGKAED 385
           ++ R V+    L                    M++ +F  N   YS+++ G  ++G+ E+
Sbjct: 651 RM-RLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEE 709

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A  L   M E     N  +Y+AL+   C+  +  +A  ++  MI +G      +Y  L+ 
Sbjct: 710 ATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLS 769

Query: 446 GFFESGKGHKAVEI-----WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           G    G+  KA EI     WKD +      +E+ + V+I GL + G    +R +   +  
Sbjct: 770 GLICEGQTDKAKEIFMNSRWKDYSP-----DEIVWKVIIDGLIKKGHSDISREMIIMLER 824

Query: 501 RGCKPDVVAYSSMIHGL 517
             C+P    Y+ +   L
Sbjct: 825 MNCRPSHQTYAMLTEEL 841


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 204/401 (50%), Gaps = 19/401 (4%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            ++ N +  +   + +C +G  + A  + REM  +   PD  TY  ++  LC  +++++A
Sbjct: 182 GVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKA 241

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L  EM+ +G  P    +  LI+  CK G + +A    D M   GC PN VTY  LIH 
Sbjct: 242 FQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHA 301

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV- 365
                 + KA  + + M++  C PN VTY  +I+GL K G+    +++   M++    + 
Sbjct: 302 YLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIP 361

Query: 366 ----------------NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
                           N + Y  L+ GL K  + ++A  L K M  +GC+PN VVY ALI
Sbjct: 362 DVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALI 421

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG C+ GK DEA+E+   M+  G   N +TYSSL+   F+  +   A+++   M +N+C 
Sbjct: 422 DGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCA 481

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N V Y+ +I GLC+ GK  EA  +   M  +GC P+VV Y++MI G   +G VE+ L+L
Sbjct: 482 PNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLEL 541

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
             +M        P+  TY +L+N  C    +  +  LL  M
Sbjct: 542 LQQM--SSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580



 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/488 (30%), Positives = 216/488 (44%), Gaps = 85/488 (17%)

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           YN I        +P+T T++ VI  +C    V+ A QLF+EM      PD+Y Y TL+D 
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDS 266

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            CK   +++A    DEM+ DGC P  VT+  LI+   K+ ++ +A ++ + M  KGC PN
Sbjct: 267 FCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPN 326

Query: 297 EVTYNTLIHGLCLKGNLDK----------------------------------------- 315
            VTY  LI GLC  G ++K                                         
Sbjct: 327 IVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALV 386

Query: 316 -----------AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
                      A  LL  M    C PN V Y  +I+G  K G+  +   V  +M E  + 
Sbjct: 387 DGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYD 446

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            N Y YS+LI  LFK+ + + A+K+  +M+E  C PN V+Y+ +IDGLC+VGK DEA ++
Sbjct: 447 PNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKL 506

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           +  M   GC  N  TY++++ GF +SG+  K +E+ + M+   C  N V Y VLI+  C 
Sbjct: 507 MVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCS 566

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL--------------------------- 517
            G L EA  +  +M        V  Y  +I G                            
Sbjct: 567 TGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYR 626

Query: 518 ------CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
                   AG +E AL+L  E+    P S  +   +  L+  L        + +L   M+
Sbjct: 627 VLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMI 686

Query: 572 DRGCDPDL 579
            RG  P+L
Sbjct: 687 SRGSIPEL 694



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 242/504 (48%), Gaps = 49/504 (9%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +  T      ++C+ G    A+ L  +       PD   Y  ++ GLC+ +  +EA+  L
Sbjct: 9   DEFTLGCFAHSLCKSGKWREALSLLEK---EEFVPDTVLYTKMISGLCEASLFEEAMDFL 65

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             M+   C P  +T+ +L+ G     +LGR  +++  M  +GC P+   +N+L+H  C  
Sbjct: 66  TRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRS 125

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF------- 363
           G+   A  LL +MV   C P  V Y  +I G+     + +  + ++ + E+ +       
Sbjct: 126 GDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICS---SEEPGKDVLDLAEKAYGEMLEAG 182

Query: 364 ----HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                VN   +S  + G+   GK E A  + ++MM KG  P+T  YS +I  LC   K +
Sbjct: 183 VVLNKVNISNFSRCLCGI---GKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVE 239

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A ++  EM  NG A + + Y++L+  F ++G   +A   + +M ++ C  N V Y+ LI
Sbjct: 240 KAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALI 299

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------ 533
           H   +  K+ +A  V+  MLS+GC P++V Y+++I GLC AG +E+A +++  M      
Sbjct: 300 HAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVE 359

Query: 534 ---------LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
                    +     ++P+VFTY  L++ LCK   +  + DLL SM   GC+P+ V  + 
Sbjct: 360 IPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDA 419

Query: 585 FLTAL--KEKLEAPQD--------GTD----FLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
            +       KL+  Q+        G D      + L  RLFK +R     K++  ML+  
Sbjct: 420 LIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS 479

Query: 631 LSPQTSTWERVVQELCRPKRIQAA 654
            +P    +  ++  LC+  +   A
Sbjct: 480 CAPNVVIYTEMIDGLCKVGKTDEA 503



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 136/502 (27%), Positives = 236/502 (47%), Gaps = 56/502 (11%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           ST+  +I +  N+   +    +   M+R         +  +  ++ KA  +E+A   F  
Sbjct: 223 STYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDE 282

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M +   C   V ++ ++++  ++     +A E Y  +++       PN +T+  +I  +C
Sbjct: 283 M-ERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSK---GCTPNIVTYTALIDGLC 338

Query: 204 RLGLVDNAIQLFREMPVRNCE-----------------PDIYTYCTLMDGLCKENRLDEA 246
           + G ++ A Q+++ M   N E                 P+++TY  L+DGLCK  ++ EA
Sbjct: 339 KAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEA 398

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             LL  M V+GC P  V ++ LI+G CK G+L  A ++   M   G  PN  TY++LI  
Sbjct: 399 RDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDR 458

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           L     LD A+ +L +M+ + C PN V Y  +I+GL K+G+  +  ++++ MEE+  + N
Sbjct: 459 LFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPN 518

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL- 425
              Y+ +I G  K G+ E  ++L +QM  KGC PN V Y  LI+  C  G  DEA ++L 
Sbjct: 519 VVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLE 578

Query: 426 --------------------------------FEMINNGCAANAFTYSSLMKGFFESGKG 453
                                           FE+  N     A  Y  L+  F ++G+ 
Sbjct: 579 EMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRL 638

Query: 454 HKAVEIWKDMAKNN--CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
             A+E+ ++++  +     N+  +  LI  L    K  +A  ++  M+SRG  P++    
Sbjct: 639 EIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILV 698

Query: 512 SMIHGLCNAGSVEEALKLFNEM 533
            +I GL      EEAL+L + +
Sbjct: 699 HLIKGLLRVNRWEEALQLLDSI 720



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 212/496 (42%), Gaps = 87/496 (17%)

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
            CKR       +L+++I EG Y                   P+   FN ++   CR G  
Sbjct: 95  RCKR-------ILSMMITEGCY-------------------PSPRIFNSLVHAYCRSGDY 128

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCK-----ENRLDEAVLLLDEMQVDGCFPTPV 263
             A +L ++M    C+P    Y  L+ G+C      ++ LD A     EM   G     V
Sbjct: 129 AYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKV 188

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
             +     LC  G+  +A  ++  M  KG +P+  TY+ +I  LC    ++KA  L   M
Sbjct: 189 NISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEM 248

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
             +   P+   Y T+I+   K G           ME      N   Y+ LI    K  K 
Sbjct: 249 KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKV 308

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL----------------FE 427
             A ++++ M+ KGC PN V Y+ALIDGLC+ GK ++A +I                 F 
Sbjct: 309 SKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFR 368

Query: 428 MINNGC-AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +++      N FTY +L+ G  ++ +  +A ++ K M+   C  N V Y  LI G C+ G
Sbjct: 369 VVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAG 428

Query: 487 KLREARMVWTQMLSRG-----------------------------------CKPDVVAYS 511
           KL EA+ V+T ML  G                                   C P+VV Y+
Sbjct: 429 KLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYT 488

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSM 570
            MI GLC  G  +EA KL   M+ +E K   P+V TY  +++   K   +   ++LL  M
Sbjct: 489 EMIDGLCKVGKTDEAYKL---MVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQM 545

Query: 571 MDRGCDPDLVTCNIFL 586
             +GC P+ VT  + +
Sbjct: 546 SSKGCAPNFVTYRVLI 561



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/248 (24%), Positives = 106/248 (42%), Gaps = 24/248 (9%)

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M   G   + FT         +SGK  +A+ +   + K   V + V Y+ +I GLCE   
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSL---LEKEEFVPDTVLYTKMISGLCEASL 57

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
             EA    T+M +  C P+V+ Y  ++ G  N   +    ++ + M+       P +F  
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIF-- 115

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF----- 602
           N L++A C+  + +++  LL  M+  GC P  V  NI +  +    E  +D  D      
Sbjct: 116 NSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAY 175

Query: 603 ---------LNELAIRLFKR-----QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                    LN++ I  F R      +    + ++  M+ K   P TST+ +V+  LC  
Sbjct: 176 GEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNA 235

Query: 649 KRIQAAIN 656
            +++ A  
Sbjct: 236 SKVEKAFQ 243


>gi|224084127|ref|XP_002307219.1| predicted protein [Populus trichocarpa]
 gi|222856668|gb|EEE94215.1| predicted protein [Populus trichocarpa]
          Length = 584

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 265/569 (46%), Gaps = 81/569 (14%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK 119
           +   P + + F    KL ++    ST+ +LI        F +++ +L  M +   +  ++
Sbjct: 25  QKSAPQALQTFEWASKLPNFTHSQSTYRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDE 84

Query: 120 S-FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           S F+ I +  G+A ++ + I++   +V  +    ++K FNS+L+V+++E +   A +FY 
Sbjct: 85  SIFLTIIRGLGRARMIRDVIKVLD-LVTRYGKNPSLKIFNSILDVLVKEDI-DLARKFYR 142

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
                                                ++M     + D YTY  LM GLC
Sbjct: 143 -------------------------------------KKMMGAGIQGDDYTYGILMKGLC 165

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
             NR+ E   LL  ++  G  P  V +N L++ LC NG++GRA  L++ +      PN+V
Sbjct: 166 LTNRIGEGFKLLQVIKSRGLKPNVVIYNTLLHALCNNGKVGRARSLMNEI----KEPNDV 221

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T+N LI G C + N  +A+ LL++  +   +P+ VT   ++  L  +GR  +   +L  +
Sbjct: 222 TFNVLICGYCKEDNFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERV 281

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E +   V+   ++TLI G  K GK +    L K+M  KGC PN   Y+ALI G C  G  
Sbjct: 282 ESKGGVVDVVAHNTLIKGFCKFGKVKLGHGLLKEMERKGCLPNADTYNALISGFCESGML 341

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV-------YN 471
           + A ++  +M  +G   N  T+ +L+KG F  G+     +I + M +   V       YN
Sbjct: 342 ESALDMFNDMKTDGINCNFVTFDTLIKGLFSRGRTEDGFKILELMEETRGVCGGSISPYN 401

Query: 472 EVCY----------------------------SVLIHGLCEDGKLREARMVWTQMLSRGC 503
            V Y                            S+ I G CE+G ++EA+ V+ QM + G 
Sbjct: 402 SVLYGLYRKNMLNEALEFLMKMENLFPRAVDRSLRILGFCEEGAIQEAKRVYDQMNNEGG 461

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P  + Y  +IHG C  G V EAL+L NEM+ L     P   T+N L++  C+      +
Sbjct: 462 IPSALVYDCLIHGFCQEGCVREALELMNEMVFL--GYFPVASTFNALISGFCRLGKDGSA 519

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           + LL  M+ RGC PD  + +  + AL  K
Sbjct: 520 LKLLEDMVGRGCVPDTGSYSPLIDALCRK 548


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 266/536 (49%), Gaps = 33/536 (6%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY--HRALEFYNHIVN 182
              Y +  L   A +L H+       + ++++ N+VL+ + +        +L+ ++ ++ 
Sbjct: 143 LSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIA 202

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
              + + PN  TFNL++ T C  G + +A+    +M      PD  TY TL++  C++  
Sbjct: 203 ---LRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGM 259

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L EA  LL  M+ +G  PT  T+N L++   + G + +A  +V+ M   G  P+  TYN 
Sbjct: 260 LGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNV 319

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           L  GLC  G +D+A  L D M     + P+ VTY T+++   K  R+ D   +L  M E+
Sbjct: 320 LAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREK 379

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               +   ++ ++ GL +EG+ E+A+   + M E+G  P+ + Y+ LID  C+ G   +A
Sbjct: 380 GVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKA 439

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             ++ EM+ +G   + FT ++L+    +  +  +A E+ +   +   V +EV Y  ++  
Sbjct: 440 FVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAA 499

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
             ++ K   A  +W +M+ R   P +  Y+++I GL   G + EA+   NE+  +E    
Sbjct: 500 YFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNEL--MEMGLV 557

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDG 599
           PD  TYNI+++A CK+ ++  +    N M++    PD+VTCN  +    L  +LE     
Sbjct: 558 PDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEK---- 613

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  A++LF+     G  K V+V+          T+  ++Q LC+   +  A+
Sbjct: 614 -------AMKLFESWVEKG--KKVDVI----------TYNTLIQALCKDNDVDTAL 650



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 145/483 (30%), Positives = 240/483 (49%), Gaps = 47/483 (9%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++LN   ++G+   A      +   K   I+P   T+N ++    RLG +  A  + 
Sbjct: 246 TYNTLLNAHCRKGMLGEARTL---LARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVV 302

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ---------------VDGCF- 259
             M     EPD++TY  L  GLC+  ++DEA  L DEM+               VD CF 
Sbjct: 303 EAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFK 362

Query: 260 --------------------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
                                + VT N+++ GLC+ G+L  A   ++ M  +G  P+ +T
Sbjct: 363 CQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVIT 422

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTLI   C  GN+ KA  L+D MV S    +  T  T++  L K  R  +   +L +  
Sbjct: 423 YNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPP 482

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R F  +E  Y T+++  FKE K E A+ LW +M+++   P+   Y+ LI GL  +GK  
Sbjct: 483 QRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLT 542

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA + L E++  G   +  TY+ ++  + + G   KA +    M +N+   + V  + L+
Sbjct: 543 EAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLM 602

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +GLC  G+L +A  ++   + +G K DV+ Y+++I  LC    V+ AL+ F +M   E +
Sbjct: 603 NGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADM---EVR 659

Query: 540 S-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
             QPDVFTYN+LL+AL +      +  +L+ + + G     +    F  ++K  +EA + 
Sbjct: 660 GLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESG----KLYGRFFYPSIKSSVEAVET 715

Query: 599 GTD 601
           G D
Sbjct: 716 GKD 718



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 197/397 (49%), Gaps = 7/397 (1%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            I K   +   +EEA+     M +E      V ++N++++   + G   +A    + +V 
Sbjct: 390 IIVKGLCREGQLEEALGRLEMMTEE-GLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVR 448

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           +    +  +T T N ++  +C+    + A +L R  P R   PD  +Y T+M    KE +
Sbjct: 449 S---GLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            + A+ L DEM      P+  T+N LI GL   G+L  A   ++ +   G +P++ TYN 
Sbjct: 506 PEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNI 565

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +IH  C +G+L+KA    ++MV +   P+ VT  T++NGL   GR     ++  S  E+ 
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKG 625

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
             V+   Y+TLI  L K+   + A++ +  M  +G +P+   Y+ L+  L   G+  EA+
Sbjct: 626 KKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQ 685

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK--NNCVYNEVCYSVLIH 480
           ++L ++  +G     F Y S+ K   E+ +  K  E+  D+    N    ++  Y+  I 
Sbjct: 686 KMLHKLNESGKLYGRFFYPSI-KSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIK 744

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            LC  G+L+EA+ V  +M+ +G   D   Y +++ GL
Sbjct: 745 ELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 194/416 (46%), Gaps = 27/416 (6%)

Query: 246 AVLLLDEMQVDGCF-PTPVTFNVLINGLCKNGELGRAAKL--VDNMFLKGCLPNEVTYNT 302
           A  LL   +  GC  P+    N +++ L ++      A L    ++      PN  T+N 
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNL 214

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           L+H  C KG L  A+S L +M      P+ VTY T++N   + G   +   +L  M++  
Sbjct: 215 LVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEG 274

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
                  Y+TL+S   + G  + A  + + M   G +P+   Y+ L  GLC+ GK DEA 
Sbjct: 275 IVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 334

Query: 423 EILFEMINNG-CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           ++  EM   G  + +  TY++L+   F+  +   A+ + ++M +     + V +++++ G
Sbjct: 335 KLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKG 394

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC +G+L EA      M   G  PDV+ Y+++I   C AG+V +A  L +EM+      +
Sbjct: 395 LCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMV--RSGLK 452

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
            D FT N LL  LCK+     + +LL +   RG  PD V+    + A             
Sbjct: 453 MDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAY------------ 500

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
                    FK  +      + + M+++ L+P  ST+  +++ L    ++  AI+K
Sbjct: 501 ---------FKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDK 547



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 126/542 (23%), Positives = 231/542 (42%), Gaps = 72/542 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  +   G       +L RM++E  V    ++  +  AY +   +++A  +   M
Sbjct: 246 TYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAM 305

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF----------------YNHIVNA----- 183
              F  +  + ++N +   + Q G    A +                 YN +V+A     
Sbjct: 306 T-AFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQ 364

Query: 184 ---KHMNIL---------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
                +N+L          + +T N+++K +CR G ++ A+     M      PD+ TY 
Sbjct: 365 RSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYN 424

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           TL+D  CK   + +A +L+DEM   G      T N L+  LCK      A +L+     +
Sbjct: 425 TLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQR 484

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G +P+EV+Y T++     +   + A+ L D M+  K  P+  TY T+I GL  +G+  + 
Sbjct: 485 GFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEA 544

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
              L  + E     ++  Y+ +I    KEG  E A +   +M+E   KP+ V  + L++G
Sbjct: 545 IDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNG 604

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC  G+ ++A ++    +  G   +  TY++L++   +      A+  + DM       +
Sbjct: 605 LCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPD 664

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQM---------------------LSRGCKPDVVA- 509
              Y+VL+  L E G+  EA+ +  ++                     +  G  P+V + 
Sbjct: 665 VFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSD 724

Query: 510 --------------YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
                         Y+  I  LC  G ++EA  + +EM  ++     D  TY  L+  L 
Sbjct: 725 IESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEM--MQKGMSVDNSTYITLMEGLI 782

Query: 556 KQ 557
           K+
Sbjct: 783 KR 784



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 162/365 (44%), Gaps = 40/365 (10%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A  KA  V +A  L   MV     K    + N++L  + +E  Y  A E    +   
Sbjct: 426 LIDASCKAGNVAKAFVLMDEMVRS-GLKMDTFTLNTLLYNLCKEKRYEEAEEL---LRAP 481

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                +P+ +++  V+    +    + A+ L+ EM  R   P I TY TL+ GL    +L
Sbjct: 482 PQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKL 541

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA+  L+E+   G  P   T+N++I+  CK G+L +A +  + M      P+ VT NTL
Sbjct: 542 TEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTL 601

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++GLCL G L+KA+ L +  V      + +TY T+I  L K        R    ME R  
Sbjct: 602 MNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGL 661

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQM---------------------MEKGCKP-- 400
             + + Y+ L+S L + G++ +A K+  ++                     +E G  P  
Sbjct: 662 QPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEV 721

Query: 401 -------------NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
                        +   Y+  I  LC  G+  EA+ +L EM+  G + +  TY +LM+G 
Sbjct: 722 KSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781

Query: 448 FESGK 452
            +  K
Sbjct: 782 IKRQK 786



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 171/367 (46%), Gaps = 20/367 (5%)

Query: 57  GNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVV 116
           GN        DE+  S  K+ ++     T  +L+ +      ++  E +L    +   V 
Sbjct: 434 GNVAKAFVLMDEMVRSGLKMDTF-----TLNTLLYNLCKEKRYEEAEELLRAPPQRGFVP 488

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
            E S+  +  AY K +  E A+ L+  M+       ++ ++N+++  +   G    A++ 
Sbjct: 489 DEVSYGTVMAAYFKEYKPEPALCLWDEMIKR-KLTPSISTYNTLIKGLSTMGKLTEAIDK 547

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
            N ++    M ++P+  T+N++I   C+ G ++ A Q   +M   + +PD+ T  TLM+G
Sbjct: 548 LNELM---EMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNG 604

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC   RL++A+ L +     G     +T+N LI  LCK+ ++  A +   +M ++G  P+
Sbjct: 605 LCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPD 664

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL--VKLGR----AVD 350
             TYN L+  L   G   +A  +L ++  S  +     Y +I + +  V+ G+      D
Sbjct: 665 VFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSD 724

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              V  +  + +   N+YI    I G  KE KA     +  +MM+KG   +   Y  L++
Sbjct: 725 IESVGNTQGDDQESYNKYIKELCIGGQLKEAKA-----VLDEMMQKGMSVDNSTYITLME 779

Query: 411 GLCRVGK 417
           GL +  K
Sbjct: 780 GLIKRQK 786


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/540 (27%), Positives = 259/540 (47%), Gaps = 42/540 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y  +G F+    +L R RR+  +    S+  I    G+   V+EA++ F  M
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      + ++N +++++ + G    AL   + + +A    + PN +T N+++  +C+
Sbjct: 402 KKD--AIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDA---GLFPNVITVNIMVDRLCK 456

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D+A  +F  +  + C PD  TYC+L++GL +  R+DEA  L ++M      P  V 
Sbjct: 457 AQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVV 516

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI    K G      K+ + M   GC P+ +  NT +  +   G ++K  +L   + 
Sbjct: 517 YTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIK 576

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+  +Y  +I+GLVK G A +   +  +M+E+   ++   Y+T+I G  K GK  
Sbjct: 577 NLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVN 636

Query: 385 DAMKLWKQMMEKGCKP-----------------------------------NTVVYSALI 409
            A +L ++M  KG +P                                   N V+YS+LI
Sbjct: 637 KAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLI 696

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  I+ E++  G   N +T++ L+    ++ +  +A+  ++ M    C 
Sbjct: 697 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCT 756

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N + YS+LIHGLC+  K  +A + W +M  +G KP+V  Y++MI GL  AG++ EA  L
Sbjct: 757 PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F +    E     D   YN ++  L   +  S +  L      +GC     TC + L +L
Sbjct: 817 FEKF--KEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSL 874



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 145/532 (27%), Positives = 258/532 (48%), Gaps = 21/532 (3%)

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           + LF  M  E      V  F +++ V  +EG    AL   + +   K  ++ P+ + +N+
Sbjct: 220 LTLFQQM-QELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM---KSNSLEPDVVLYNV 275

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
            I    + G VD A + F EM       D  TY +++  LCK +RL+EAV L + M  + 
Sbjct: 276 CIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNK 335

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P    +N +I G    G+   A  L++    KGC+P+ V+YN ++  L  KG +D+A+
Sbjct: 336 QVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEAL 395

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
              + M     +PN  TY  +I+ L K G+      V  +M++     N    + ++  L
Sbjct: 396 KKFEEM-KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRL 454

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K  + +DA  +++ +  K C+P+ V Y +LI+GL R G+ DEA ++  +M++     NA
Sbjct: 455 CKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNA 514

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             Y+SL++ FF+ G+     +I+ +M +  C  + +  +  +  + + G++ + R ++ +
Sbjct: 515 VVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQE 574

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           + + G  PD  +Y+ +IHGL  AG   EA +LF  M   E     D   YN +++  CK 
Sbjct: 575 IKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK--EQGCVLDTRAYNTVIDGFCKS 632

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK--EKL--------EAPQDGTDF----L 603
             ++ +  LL  M  +G +P +VT    +  L   ++L        EA   G +      
Sbjct: 633 GKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIY 692

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           + L     K  R    + I+E ++QK L+P   TW  ++  L + + I  A+
Sbjct: 693 SSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEAL 744



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 202/432 (46%), Gaps = 39/432 (9%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +++A  +F  + D   C+    ++ S++  + + G    A + Y  +++A   N +
Sbjct: 456 KAQRLDDACSIFEGL-DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDA---NQI 511

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN + +  +I+   + G  ++  +++ EM    C PD+    T MD + K   +++   L
Sbjct: 512 PNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRAL 571

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             E++  G  P   ++ +LI+GL K G    A +L   M  +GC+ +   YNT+I G C 
Sbjct: 572 FQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCK 631

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G ++KA  LL+ M      P  VTYG++I+GL K+ R  +   +    + +   +N  I
Sbjct: 632 SGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVI 691

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKG-------------------------------- 397
           YS+LI G  K G+ ++A  + +++M+KG                                
Sbjct: 692 YSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMK 751

Query: 398 ---CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
              C PN + YS LI GLC++ K ++A     EM   G   N FTY++++ G  ++G   
Sbjct: 752 DLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIV 811

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A  +++   +   V +   Y+ +I GL    +  +A  ++ +   +GC         ++
Sbjct: 812 EADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLL 871

Query: 515 HGLCNAGSVEEA 526
             L  A  +E+A
Sbjct: 872 DSLHKAECIEQA 883



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 184/392 (46%), Gaps = 26/392 (6%)

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N L+  + +  +     ++++ M + G  P+  T   ++        L +A + +  M
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGK 382
              K  P    Y  +I G +   R  D    L   M+E  + VN ++++TLI    +EG+
Sbjct: 192 RKLKFRPAFSAYTNLI-GALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A+ L  +M     +P+ V+Y+  ID   + GK D A +   EM  NG   +  TY+S
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++    ++ + ++AVE+++ M +N  V     Y+ +I G    GK  +A  +  +   +G
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C P VV+Y+ ++  L   G V+EALK F EM   +  + P++ TYNI+++ LCK   +  
Sbjct: 371 CIPSVVSYNCILSCLGRKGQVDEALKKFEEM---KKDAIPNLSTYNIMIDMLCKAGKLET 427

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           ++ + ++M D G  P+++T NI +                      RL K QR      I
Sbjct: 428 ALVVRDAMKDAGLFPNVITVNIMVD---------------------RLCKAQRLDDACSI 466

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            E +  K   P   T+  +++ L R  R+  A
Sbjct: 467 FEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEA 498


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 132/428 (30%), Positives = 217/428 (50%), Gaps = 32/428 (7%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  ++   CR GL+++A ++   MP        Y +  L+  LC+  R+ +A+++LD M
Sbjct: 130 TYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGM 189

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              GC P  VT+N+L+   CK     +A +L+D M  +GC PN VTYN +I  +C +G++
Sbjct: 190 LCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDV 249

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A  LL+ + +  C PN V Y T++ G   + R VD   +L  M       NE   + +
Sbjct: 250 DQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVI 309

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+ L ++G  +      ++M + GC  N V Y+A+I G+C  G  D A E+L  M + GC
Sbjct: 310 INTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGC 369

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY++++KG   + +   A E+   M++N+ + +   ++ +I   C+ G + +A  
Sbjct: 370 KPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFE 429

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM-----------------LCL 536
           V+ QM  +GC P+   YS++I GL  AG +E+AL+L NEM                 L  
Sbjct: 430 VFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNK 489

Query: 537 EPKSQ---------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           E K +               P    YN +L  LC+     ++ID+L  M+  GC PD  T
Sbjct: 490 EDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDEST 549

Query: 582 CNIFLTAL 589
             I +  L
Sbjct: 550 YIILIEGL 557



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/481 (30%), Positives = 240/481 (49%), Gaps = 12/481 (2%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+ +L+  Y  +G  +    V+  M    +     +   +  A  +   V +A+ +   
Sbjct: 129 ATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDG 188

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+    C   V ++N +L    +   Y +ALE  + +   +     PN +T+N++I  +C
Sbjct: 189 MLCR-GCAPDVVTYNILLQAACKGRGYRQALELIDFM---RAEGCEPNNVTYNVIIDAMC 244

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G VD A +L   +P R C+P+   Y T++ G C   R  +A  +LDEM  + C P   
Sbjct: 245 REGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEA 304

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T NV+IN LC+ G L +    ++ M   GC  N VTYN +I G+C +GN+D A+ LL  M
Sbjct: 305 TLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNM 364

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            +  C P+ VTY T++ GL    R  D   +++ M +     +   ++T+IS   ++G  
Sbjct: 365 QSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLI 424

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A +++KQM EKGC PN+  YS +I GL + GK ++A E+L EM N G   +   Y  L
Sbjct: 425 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVL 483

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
            +   +  K  + V++   +  +      V Y+ ++ GLC +GK   A  V   M+S GC
Sbjct: 484 TESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGC 543

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN-ALCKQSNISH 562
            PD   Y  +I GL   G  +EA +L +  LC       DV + +++ N AL    NI  
Sbjct: 544 MPDESTYIILIEGLFYEGYSKEARELLSR-LCSR-----DVLSNSLIKNEALLLDQNIRS 597

Query: 563 S 563
           S
Sbjct: 598 S 598



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 227/468 (48%), Gaps = 29/468 (6%)

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP--TPV 263
           G +D A++L    P     PD+     L+  LC+  R  +A  +     V+ C P  T  
Sbjct: 78  GDLDAALRLVGSSPR---PPDVPLANRLVRDLCRRGRPADAARV-----VEACGPEATAA 129

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  L++G C+ G L  A ++V  M       +   +N LIH LC +G +  A+ +LD M
Sbjct: 130 TYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGM 189

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGK 382
           +   C P+ VTY  ++    K GR    A  L+  M       N   Y+ +I  + +EG 
Sbjct: 190 LCRGCAPDVVTYNILLQAACK-GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGD 248

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A +L   +  +GCKPNTV Y+ ++ G C + +  +A+EIL EM+   C  N  T + 
Sbjct: 249 VDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNV 308

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++      G   K     + M+K+ C  N V Y+ +I G+CE G +  A  + + M S G
Sbjct: 309 IINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFG 368

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           CKPD+V Y++++ GLC+A   E+A +L  +M   +    PD  T+N +++  C++  I  
Sbjct: 369 CKPDIVTYNTVLKGLCSADRWEDAEELMIKM--SQNDRLPDNSTFNTIISFWCQKGLILQ 426

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF----------- 611
           + ++   M ++GC+P+  T +  +  L +  +  Q   + LNE+A + F           
Sbjct: 427 AFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQ-ALELLNEMANKGFNTDKMYRVLTE 485

Query: 612 ---KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              K  +     ++V  +    +SPQT  +  V+  LCR  +   AI+
Sbjct: 486 SLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAID 533



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 157/334 (47%), Gaps = 35/334 (10%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E+ NS P  G  +     + ++++ + +   +   + +L  M RE     E +   I   
Sbjct: 254 ELLNSLPSRGC-KPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINT 312

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF----------- 176
             +  L+++ + L+   + +  C   V ++N+V++ + ++G    ALE            
Sbjct: 313 LCRKGLLQK-VTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKP 371

Query: 177 ----YNHIV----------NAKHMNI-------LPNTLTFNLVIKTVCRLGLVDNAIQLF 215
               YN ++          +A+ + I       LP+  TFN +I   C+ GL+  A ++F
Sbjct: 372 DIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVF 431

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           ++MP + C P+  TY T++ GL K  ++++A+ LL+EM   G F T   + VL   L K 
Sbjct: 432 KQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKG-FNTDKMYRVLTESLNKE 490

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            ++    ++V  +   G  P  V YNT++ GLC  G  D A+ +L  MV+  CMP+E TY
Sbjct: 491 DKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTY 550

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             +I GL   G + +   +L  +  R    N  I
Sbjct: 551 IILIEGLFYEGYSKEARELLSRLCSRDVLSNSLI 584


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  229 bits (584), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 229/443 (51%), Gaps = 17/443 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +     KA  + EA+  ++ M+ E HC   ++  N +L  + Q G   +A+  +  
Sbjct: 5   TFSVLIAGLCKAGRLGEAVECYNQML-ERHCVPNLRDINLLLASLCQAGKMDQAMAIFRG 63

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMDGL 237
           I         P+ +T N++I   C L L+D A++LF EM  +N    P+  TY  ++   
Sbjct: 64  I------QCSPSVITLNILINGFCELQLLDKALELFHEME-KNFALVPEATTYTAIIKCY 116

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF-LKGCLPN 296
           CK +RLD+A  LL+E     C    +    +  G CK   +  A +L+ +M   K   P+
Sbjct: 117 CKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPD 174

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            V +N +IHG C  G + +A  +L+ +V+  C+PN VTY T+I+G  K G   +  ++  
Sbjct: 175 IVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFK 234

Query: 357 SMEERKFHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
            +  R  H   N   ++ LISGL K  + E A +L KQM  +  + +T  Y+ L+DGLC+
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G+  E   +  EM+  GC  +  TY++L+    ++G    A ++ + M       +   
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTT 354

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+VL+ GL E+GK+R A   + ++L   C P  V YS+++ G C A  V+EA+K + EM 
Sbjct: 355 YTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM- 413

Query: 535 CLEPKSQPDVFTYNILLNALCKQ 557
            L+ +  PD  T  +L+  LCK+
Sbjct: 414 -LDRRLAPDPATCKLLVEMLCKR 435



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 216/406 (53%), Gaps = 13/406 (3%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            +  +  +A  +++A+ +F  +     C  +V + N ++N   +  L  +ALE ++ +  
Sbjct: 43  LLLASLCQAGKMDQAMAIFRGI----QCSPSVITLNILINGFCELQLLDKALELFHEM-- 96

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            K+  ++P   T+  +IK  C++  +D A QL  E     C  D+    ++  G CK  R
Sbjct: 97  EKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEESSC--CSSDVIAITSVARGFCKAQR 154

Query: 243 LDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           +DEA  LLLD ++     P  V +NV+I+G CK G +  A ++++ +   GC+PN VTY 
Sbjct: 155 VDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYT 214

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASK---CMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TLI G C  GNL +A+ L  ++++S+     PN VT+  +I+GL K  R      ++  M
Sbjct: 215 TLIDGFCKSGNLSEALQLF-KVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQM 273

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           + R    + + Y+TL+ GL K+G+  +  +++++M+ +GC P+ V Y+ L+   C+ G  
Sbjct: 274 KARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSL 333

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            +A++++  M+  G   +  TY+ L++G FE+GK   A E ++ + +  C    V YS L
Sbjct: 334 QDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSAL 393

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           + G C+   + EA   + +ML R   PD      ++  LC  G  +
Sbjct: 394 VRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/466 (27%), Positives = 229/466 (49%), Gaps = 34/466 (7%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  TF+++I  +C+ G +  A++ + +M  R+C P++     L+  LC+  ++D+A+ +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLC 308
              +Q   C P+ +T N+LING C+   L +A +L   M     L P   TY  +I   C
Sbjct: 61  FRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
               LD+A  LL+   +S C  + +   ++  G  K  R  +  ++L+ M E+K    + 
Sbjct: 118 KMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDI 175

Query: 369 I-YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + ++ +I G  K G+  +A ++ + ++  GC PN V Y+ LIDG C+ G   EA + LF+
Sbjct: 176 VAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQ-LFK 234

Query: 428 MI---NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           ++   ++    N  T+++L+ G  ++ +   A E+ K M   +   +   Y+ L+ GLC+
Sbjct: 235 VLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCK 294

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G+  E   V+ +ML  GC P VV Y++++H  C AGS+++A ++   M  +     PDV
Sbjct: 295 QGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSM--VAKGIPPDV 352

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            TY +LL  L +   +  + +    ++   C P    C +  +AL               
Sbjct: 353 TTYTVLLEGLFENGKVRTATEFFEKILRERCPP----CAVVYSALVRG------------ 396

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                  K        K    ML + L+P  +T + +V+ LC+  R
Sbjct: 397 -----CCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 194/396 (48%), Gaps = 61/396 (15%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   TF+VLI GLCK G LG A +  + M  + C+PN    N L+  LC  G +D+A+++
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAI 60

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              +   +C P+ +T   +ING  +L + +D A  L    E+ F +              
Sbjct: 61  FRGI---QCSPSVITLNILINGFCEL-QLLDKALELFHEMEKNFAL-------------- 102

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
                               P    Y+A+I   C++ + D+A ++L E  ++ C+++   
Sbjct: 103 -------------------VPEATTYTAIIKCYCKMDRLDQARQLLEE--SSCCSSDVIA 141

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMA-KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            +S+ +GF ++ +  +A ++  DM  K +   + V ++V+IHG C+ G++REA  +   +
Sbjct: 142 ITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETL 201

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +S GC P+ V Y+++I G C +G++ EAL+LF  +   +  ++P+V T+N L++ LCK  
Sbjct: 202 VSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKAD 261

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            + H+ +L+  M  R    D  T    +           DG          L K+ RTS 
Sbjct: 262 RLEHAFELVKQMKARDLRADTFTYTTLM-----------DG----------LCKQGRTSE 300

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             ++ E ML++  +P   T+  +V   C+   +Q A
Sbjct: 301 VSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDA 336


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 254/516 (49%), Gaps = 24/516 (4%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K ++K +N +L ++ + GL     + Y  ++      +  +  TFNL+I   C++G V  
Sbjct: 154 KLSLKCYNELLTLLARFGLVDEMNQLYTEMLEE---FVSMDIYTFNLMINVYCKMGFVKE 210

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A Q   +M      PD +T  + + G C+   +D A  + +EM         V++N LI+
Sbjct: 211 AKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIH 266

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLC+ G +  A  L   M    C PN  TY  LI GLC K N+ KA+ LLD M+    +P
Sbjct: 267 GLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVP 325

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + +TY ++I G  + G      R+L  M+ER    ++  Y   I  L K  + E+A +L+
Sbjct: 326 DLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLF 385

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             + E+G   N ++YS LIDG C+VGK DEA  +  +M++  C+ NA+T+++L+ G   +
Sbjct: 386 DSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSA 445

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G   +A+ ++  M K         +++LI  + + G   +A     +M+S G KP    Y
Sbjct: 446 GNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTY 505

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           ++ I   C+AG V+EA  +  +M   E    PD FTY  L+ A  K      + D+L SM
Sbjct: 506 NAFIEVYCSAGKVQEAEDMMVQM--KEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSM 563

Query: 571 MDRGCDPDLVTCNIFLTALKEKLE-----------APQDGTDFLNELAIRLFKRQRTSGG 619
            D  C+P   T   FL+ +K+  +             +  ++F +     ++K       
Sbjct: 564 FDADCEPSHHT---FLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIV 620

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            ++ E M +   +P +  +E+++  +C+ + +  A+
Sbjct: 621 IELFEEMEKHGCTPDSKCYEKLISGICKVENLGIAL 656



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 248/550 (45%), Gaps = 46/550 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF  +I  Y   G  K  +  + +M +           SFI     Y ++  V+ A R+F
Sbjct: 194 TFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFIL---GYCRSKDVDSAFRVF 250

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M +     R   S+N +++ + + G    A+  +   V  K     PN  T+  +IK 
Sbjct: 251 EEMPN-----RNEVSYNQLIHGLCEAGRIDEAVSLF---VRMKDDCCYPNVYTYTALIKG 302

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +CR   V  A+ L  EM  RN  PD+ TY +L+ G C+   LD A  LL  M+  G  P 
Sbjct: 303 LCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPD 361

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             T+   I+ LCK+  +  A +L D++  +G   N + Y+ LI G C  G +D+A  L +
Sbjct: 362 QRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFE 421

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +M++  C PN  T+  +I+GL   G   +   +   M +       Y ++ LI  + K+G
Sbjct: 422 KMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQG 481

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             +DA K  ++MM  G KP    Y+A I+  C  GK  EAE+++ +M   G   + FTY+
Sbjct: 482 DFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYT 541

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL----------CEDG----- 486
           SL+K + + G  + A ++ K M   +C  +   +  LI  L           E G     
Sbjct: 542 SLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVS 601

Query: 487 -----------KLREARMV---WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
                      K+ E  +V   + +M   GC PD   Y  +I G+C   ++  ALKL ++
Sbjct: 602 NFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQ 661

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   +    P    +N +++  CK      + +++  M+  G  P L  C   +  L E+
Sbjct: 662 MQ--KEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEE 719

Query: 593 LEAPQDGTDF 602
            E  +  + F
Sbjct: 720 GETERGNSVF 729



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 148/519 (28%), Positives = 236/519 (45%), Gaps = 75/519 (14%)

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           LV+E  +L+  M++EF     + +FN ++NV  + G    A +F   ++ A    + P+ 
Sbjct: 172 LVDEMNQLYTEMLEEF-VSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQA---GLSPDY 227

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
            T    I   CR   VD+A ++F EMP RN      +Y  L+ GLC+  R+DEAV L   
Sbjct: 228 FTSTSFILGYCRSKDVDSAFRVFEEMPNRN----EVSYNQLIHGLCEAGRIDEAVSLFVR 283

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M+ D C+P   T+  LI GLC+   + +A  L+D M  +  +P+ +TYN+LI G C  G+
Sbjct: 284 MKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGH 342

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A  LL  M     +P++ TYG  I+ L K  R  +  R+  S+ E     N  +YS 
Sbjct: 343 LDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSV 402

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG---------------- 416
           LI G  K GK ++A  L+++M+ K C PN   ++ALI GLC  G                
Sbjct: 403 LIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMG 462

Query: 417 -KP------------------DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            KP                  D+A + L +M+++G    A TY++ ++ +  +GK  +A 
Sbjct: 463 LKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAE 522

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           ++   M +     ++  Y+ LI    + G    A  V   M    C+P    + S+I  L
Sbjct: 523 DMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQL 582

Query: 518 CNAGSVEE-----------------------------ALKLFNEMLCLEPKSQPDVFTYN 548
            +   V E                              ++LF EM   +    PD   Y 
Sbjct: 583 FDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEME--KHGCTPDSKCYE 640

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            L++ +CK  N+  ++ LL+ M   G  P  +  N  ++
Sbjct: 641 KLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVIS 679



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 206/479 (43%), Gaps = 70/479 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI     +G   S   +L  M+    V  ++++        K++ VEEA RLF ++
Sbjct: 329 TYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSL 388

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +E                                        +  N + ++++I   C+
Sbjct: 389 TEE---------------------------------------GVSANVIMYSVLIDGYCK 409

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G VD A  LF +M  +NC P+ YT+  L+ GLC    L EA+ L D+M   G  PT  T
Sbjct: 410 VGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYT 469

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN+LI  + K G+   A K +  M   G  P   TYN  I   C  G + +A  ++ +M 
Sbjct: 470 FNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMK 529

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK----- 379
                P++ TY ++I    KLG       VL SM +     + + + +LI  LF      
Sbjct: 530 EEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVV 589

Query: 380 EGKAEDAMK------------LWKQM-----------MEK-GCKPNTVVYSALIDGLCRV 415
           E   E  ++            +WK M           MEK GC P++  Y  LI G+C+V
Sbjct: 590 EKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKV 649

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM-AKNNCVYNEVC 474
                A ++L +M   G + +   +++++    +  K  +A  I +DM    +    E C
Sbjct: 650 ENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHC 709

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
              LI GL E+G+      V+ ++   G   D +A+  +I G+   G VEE  +LF EM
Sbjct: 710 -KTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEM 767



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/301 (27%), Positives = 151/301 (50%), Gaps = 21/301 (6%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ L++ L + G  ++  +L+ +M+E+    +   ++ +I+  C++G   EA++ + +MI
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G + + FT +S + G+  S     A  ++++M   N    EV Y+ LIHGLCE G++ 
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN----EVSYNQLIHGLCEAGRID 275

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  ++ +M    C P+V  Y+++I GLC   +V +A+ L +EML  E    PD+ TYN 
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEML--ERNLVPDLITYNS 332

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELA 607
           L+   C+  ++  +  LL+ M +RG  PD  T   F+  L    ++E  +   D L E  
Sbjct: 333 LIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392

Query: 608 IR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +               K  +      + E ML K  SP   T+  ++  LC    ++ A+
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL 452

Query: 656 N 656
           +
Sbjct: 453 S 453



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 153/357 (42%), Gaps = 33/357 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI    ++G+ K    +  +M +        +F  +     K    ++A +    M
Sbjct: 434 TFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKM 493

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +     K   +++N+ + V    G   +  E  + +V  K   + P+  T+  +IK   +
Sbjct: 494 MSSGE-KPVARTYNAFIEVYCSAG---KVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGK 549

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL--------------------------- 237
           LGL  +A  + + M   +CEP  +T+ +L+  L                           
Sbjct: 550 LGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGS 609

Query: 238 --CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
              K    D  + L +EM+  GC P    +  LI+G+CK   LG A KL+D M  +G  P
Sbjct: 610 NMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISP 669

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           +E+ +N +I   C      +A ++++ M+ S   P      T+I GL + G    G  V 
Sbjct: 670 SEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVF 729

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
             +    ++ +E  +  LI G+ K+G  E+  +L+++M + GC  +   YS L   L
Sbjct: 730 KKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/454 (29%), Positives = 231/454 (50%), Gaps = 6/454 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A+  F+ M+ E  C  TV +FN+V+N   +EG    A + ++ +   K M   PN + +
Sbjct: 319 DALAWFNLMI-ERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL---KEMGFSPNAIMY 374

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N ++    ++  +D A  L+ EM  +   PD  T+  L+ G  K  R ++   LL ++ V
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P    F++ ++GLC  G L  A + + +M  KG  P+ + +N++I      G  DK
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A      MV     P+  T  +++ GL   GR  +   ++  M E+   VN   ++ L+ 
Sbjct: 495 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 554

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
             FK G    A  LW +M  +G  P+ V +SA IDGL + G  +EA  +  EM+  G   
Sbjct: 555 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIP 614

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N F Y+SL+ GF + GK ++A+++ K M     + +    +++I GLC+ G++R A  V+
Sbjct: 615 NNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVF 674

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M   G  PD++ Y+++I+G C A  +  A  L N M      S PD+ TYNI ++  C
Sbjct: 675 MDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYA--SGSNPDLTTYNIRIHGFC 732

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
               ++ ++ +L+ ++  G  P+ VT N  L  +
Sbjct: 733 SSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGV 766



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 157/624 (25%), Positives = 270/624 (43%), Gaps = 81/624 (12%)

Query: 67  DEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK 126
           D I+    ++G  + GD   +    H+    DF  L+ ++                   +
Sbjct: 164 DVIWWVIARIGVLRSGDLVEFMWRGHHVYESDFSVLDSLM-------------------R 204

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           A+  A +  +A+ +   M  E   + +      +  ++++ G Y    + +  ++     
Sbjct: 205 AFVNAEMGFQALEILGRM-REVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQ 263

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
              P   TF+ +I   CR G +     L   MP  +CEP+ + Y  +++  C   R  +A
Sbjct: 264 ---PCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDA 320

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           +   + M   GC PT VTFN +IN  CK G +  A KL D +   G  PN + YNTL++G
Sbjct: 321 LAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNG 380

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
                 +D+A  L + M      P+ +T+  +++G  K GR  DG R+L  +       +
Sbjct: 381 YVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPD 440

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY--------------------- 405
             ++   +SGL   G+ ++AM+    M+EKG  P+ + +                     
Sbjct: 441 RSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYK 500

Query: 406 --------------SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
                         S+L+ GL   G+  EA E++ +MI  G + N   ++ L+  FF+ G
Sbjct: 501 LMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRG 560

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
               A  +W +M +     + V +S  I GL + G + EA  V+ +ML +G  P+  AY+
Sbjct: 561 DVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYN 620

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           S+I G C  G + EALKL  E +       PD+FT N+++  LCKQ  +  +I++   M 
Sbjct: 621 SLICGFCKCGKLNEALKL--EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH 678

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
             G  PD++T N  +    +         D +N  A  L  R   SG             
Sbjct: 679 QTGLSPDIITYNTLINGYCKAF-------DMVN--ADNLVNRMYASGS------------ 717

Query: 632 SPQTSTWERVVQELCRPKRIQAAI 655
           +P  +T+   +   C  +R+  A+
Sbjct: 718 NPDLTTYNIRIHGFCSSRRMNRAV 741



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/526 (25%), Positives = 244/526 (46%), Gaps = 36/526 (6%)

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           LVE   R  H    +F         +S++   +   +  +ALE    +   + + + P+ 
Sbjct: 181 LVEFMWRGHHVYESDFSV------LDSLMRAFVNAEMGFQALEILGRM---REVGVRPSA 231

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
               ++ K + R+G   N  +LF+++  R  +P  YT+  ++ G C++  +     LL  
Sbjct: 232 SGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHL 291

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M    C P    +N++IN  C  G    A    + M  +GC P  VT+NT+I+  C +GN
Sbjct: 292 MPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGN 351

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYS 371
           + +A  L D +      PN + Y T++NG VK+ R +D A +L   M ++    +   ++
Sbjct: 352 VVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKM-REIDQANMLYEEMRKKGIAPDGITFN 410

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            L+SG +K G+ ED  +L K +   G  P+  ++   + GLC  G+ DEA E L +M+  
Sbjct: 411 ILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEK 470

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G + +   ++S++  + ++G   KA E +K M       +    S L+ GL  +G+L+EA
Sbjct: 471 GLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEA 530

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNIL 550
             +  QM+ +G   + +A++ ++      G V  A  L+ EM   E +   PDV  ++  
Sbjct: 531 TELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM---ERRGIFPDVVAFSAF 587

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           ++ L KQ  +  + ++   M+ +G  P+                         N L    
Sbjct: 588 IDGLSKQGLVEEAYNVFLEMLRKGLIPNNFA---------------------YNSLICGF 626

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            K  + +   K+ +VM  + L P   T   ++  LC+  R+++AIN
Sbjct: 627 CKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 672



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 171/360 (47%), Gaps = 4/360 (1%)

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           G    A+EF   +++     + P+ + FN VI    + GL D A + ++ M      P  
Sbjct: 455 GRLDEAMEF---LMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSP 511

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            T  +L+ GL    RL EA  L+ +M   G     + F VL++   K G++  A  L   
Sbjct: 512 STCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGE 571

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  +G  P+ V ++  I GL  +G +++A ++   M+    +PN   Y ++I G  K G+
Sbjct: 572 MERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGK 631

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +  ++   M  R    + +  + +I GL K+G+   A+ ++  M + G  P+ + Y+ 
Sbjct: 632 LNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNT 691

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI+G C+      A+ ++  M  +G   +  TY+  + GF  S + ++AV +  ++    
Sbjct: 692 LINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAG 751

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            V N V Y+ +++G+C D  L  A ++  ++L     P+VV  + ++      G  E  L
Sbjct: 752 IVPNTVTYNSMLNGVCSD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTL 810


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 228/425 (53%), Gaps = 8/425 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++  F+ VL+ I +   Y   +  ++H+   +   I  +  ++N+VI  +CR      A+
Sbjct: 9   SIVDFSKVLSKIAKSKNYDLVISLFHHM---EVCGIGHDLYSYNIVINCLCRCSRFVIAL 65

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            +  +M     EPD+ T  +L++G C+ NR+ +A+ L+ +M+  G  P  V +N +I+G 
Sbjct: 66  SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 125

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G +  A +L D M   G   + VTYN+L+ GLC  G    A  L+  MV    +PN 
Sbjct: 126 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 185

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           +T+  +I+  VK G+  +  ++   M  R    + + Y++LI+GL   G+ ++A ++   
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ KGC P+ V Y+ LI+G C+  + DE  ++  EM   G   +  TY+++++G+F++G+
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGR 305

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A EI+  M       N   YS+L++GLC + ++ +A +++  M     + D+  Y+ 
Sbjct: 306 PDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNI 362

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +IHG+C  G+VE+A  LF  + C   K  PDV +Y  +++  C++     S  L   M +
Sbjct: 363 VIHGMCKIGNVEDAWDLFRSLSCKGLK--PDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 420

Query: 573 RGCDP 577
            G  P
Sbjct: 421 DGLLP 425



 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 229/415 (55%), Gaps = 7/415 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP+ + F+ V+  + +    D  I LF  M V     D+Y+Y  +++ LC+ +R   A+ 
Sbjct: 7   LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 66

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           ++ +M   G  P  VT + LING C+   +  A  LV  M   G  P+ V YNT+I G C
Sbjct: 67  VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 126

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G ++ AV L DRM       + VTY +++ GL   GR  D AR++  M  R    N  
Sbjct: 127 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 186

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ +I    KEGK  +AMKL+++M  +   P+   Y++LI+GLC  G+ DEA+++L  M
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +  GC  +  TY++L+ GF +S +  +  +++++MA+   V + + Y+ +I G  + G+ 
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A+ ++++M SR   P++  YS +++GLC    VE+AL LF  M   + + + D+ TYN
Sbjct: 307 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM--QKSEIELDITTYN 361

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
           I+++ +CK  N+  + DL  S+  +G  PD+V+    ++    K +   D +D L
Sbjct: 362 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ--WDKSDLL 414



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 196/387 (50%), Gaps = 41/387 (10%)

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
           +F  +  V + +S++N   Q    +R  +  + +   + M   P+ + +N +I   C++G
Sbjct: 73  KFGYEPDVVTVSSLINGFCQG---NRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIG 129

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
           LV++A++LF  M       D  TY +L+ GLC   R  +A  L+ +M +    P  +TF 
Sbjct: 130 LVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFT 189

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
            +I+   K G+   A KL + M  +   P+  TYN+LI+GLC+ G +D+A  +LD MV  
Sbjct: 190 AVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 249

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
            C+P+ VTY T+ING  K  R  +G ++   M +R    +   Y+T+I G F+ G+ + A
Sbjct: 250 GCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAA 309

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
            +++ +M     +PN   YS L+ GLC                                 
Sbjct: 310 QEIFSRM---DSRPNIRTYSILLYGLCM-------------------------------- 334

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
              + +  KA+ ++++M K+    +   Y+++IHG+C+ G + +A  ++  +  +G KPD
Sbjct: 335 ---NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPD 391

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEM 533
           VV+Y++MI G C     +++  L+ +M
Sbjct: 392 VVSYTTMISGFCRKRQWDKSDLLYRKM 418



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 119/267 (44%), Gaps = 16/267 (5%)

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+ V +S ++  + +    D    +   M   G   + ++Y+ ++       +   A+ +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
              M K     + V  S LI+G C+  ++ +A  + ++M   G +PDVV Y+++I G C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G V +A++LF+ M       + D  TYN L+  LC     S +  L+  M+ R   P++
Sbjct: 128 IGLVNDAVELFDRM--ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 185

Query: 580 VT----CNIFLT------ALKEKLEAPQDGTD----FLNELAIRLFKRQRTSGGFKIVEV 625
           +T     ++F+       A+K   E  +   D      N L   L    R     +++++
Sbjct: 186 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDL 245

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQ 652
           M+ K   P   T+  ++   C+ KR+ 
Sbjct: 246 MVTKGCLPDVVTYNTLINGFCKSKRVD 272


>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g16010-like [Cucumis sativus]
          Length = 637

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 151/523 (28%), Positives = 258/523 (49%), Gaps = 6/523 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           + F    K   +Q   +T+ +LI+    SG    +   +  M R    V    +  I K 
Sbjct: 109 QFFKWAGKRQHFQHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKI 168

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
            GKA +V +A+ +F+ +     C  T   +N+++ +++ EG + +  E YN I +    N
Sbjct: 169 LGKAKMVNKALSVFYQIKGR-KCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEG--N 225

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             P+T+T++ +I    +L   D A +LF EM      P    Y T++    K N+++ A+
Sbjct: 226 CSPDTITYSALISAFGKLERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAAL 285

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L++EM+  GC PT  T+  LI GL K G +  A  L  NM   GC P+ V  N LI+ L
Sbjct: 286 RLVEEMKGKGCAPTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINIL 345

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHVN 366
              G L+ A+ L  +M + +C PN VTY T+I  + +    A + A     M+      +
Sbjct: 346 GRAGRLEDALKLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPS 405

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + Y+ LI G  K  + E A+ L ++M EKG  P    Y +LID L R  + + A E+  
Sbjct: 406 SFTYAILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQ 465

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E+  N   ++A  Y+ ++K F   G+   AV+++ +  K  C  +   Y+ L+ G+   G
Sbjct: 466 ELKENCGRSSARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRAG 525

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            + EA  +   M   GC PD+ +++ +++GL   G  + A+++F +M   E +  PD  +
Sbjct: 526 MIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMK--ESEIMPDAVS 583

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           YN +L+ L +      +  L+  M  +G + D +T +  L A+
Sbjct: 584 YNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV 626



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 45/338 (13%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + K  GK   V++A  LF  M+ +  CK  V   N+++N++ + G    AL+ +  
Sbjct: 302 TYTELIKGLGKVGRVDDAYSLFFNMLKD-GCKPDVVLINNLINILGRAGRLEDALKLFGK 360

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRL-GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
           +     +   PN +T+N VIK +         A   F +M      P  +TY  L+DG C
Sbjct: 361 M---DSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFC 417

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN----------------------- 275
           K NR+++A+LLL+EM   G  P P  +  LI+ L +                        
Sbjct: 418 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSAR 477

Query: 276 ---------GELGRAAKLVDNMFLK----GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
                    G  GR +  VD +F +    GC P+  TYN L+ G+   G +D+A SL+  
Sbjct: 478 VYAVMIKHFGNCGRLSDAVD-LFCEXEKLGCSPDVYTYNALMSGMIRAGMIDEAHSLMRN 536

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M  + C P+  ++  I+NGL K G       +   M+E +   +   Y+T++S L + G 
Sbjct: 537 MRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDAVSYNTILSCLSRAGM 596

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
            E A KL ++M  KG + +++ YS++++    VGK DE
Sbjct: 597 FEMAAKLMREMKLKGFEYDSITYSSILEA---VGKVDE 631



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 149/341 (43%), Gaps = 20/341 (5%)

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           +  TY  +I  L + G   +  R +  M      V    +S ++  L K      A+ ++
Sbjct: 123 DSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVF 182

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGFFE 449
            Q+  + C P   VY+ LI  L   G  ++  E+  E+ + G C+ +  TYS+L+  F +
Sbjct: 183 YQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGK 242

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
             +   A  ++ +M +N     E  Y+ ++    +  K+  A  +  +M  +GC P V  
Sbjct: 243 LERYDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFT 302

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ +I GL   G V++A  LF  ML  +   +PDV   N L+N L +   +  ++ L   
Sbjct: 303 YTELIKGLGKVGRVDDAYSLFFNML--KDGCKPDVVLINNLINILGRAGRLEDALKLFGK 360

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQD---------------GTDFLNELAIRLF-KR 613
           M    C P++VT N  + A+ E  +AP                  + F   + I  F K 
Sbjct: 361 MDSLQCAPNVVTYNTVIKAIFES-KAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKT 419

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            R      ++E M +K   P  + +  ++  L R KR +AA
Sbjct: 420 NRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAA 460


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 235/487 (48%), Gaps = 47/487 (9%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A + FH M+   +    + SF  +L+ + +   Y +    YN +   +   I P+  T 
Sbjct: 79  QAFQFFHLMMYS-NPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQM---RLSGISPDCCTL 134

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N+++  +C +  V   + +   +  R   PDI TY TL+ GLC E+R+ +A LL   MQ 
Sbjct: 135 NILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQK 194

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKL------------------------------- 284
            GC P  +T+  L+ GLC+ G +  A KL                               
Sbjct: 195 LGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCK 254

Query: 285 ----------VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
                      + M ++G  P  ++Y +LIHG C  G  ++A  L + MV     PN VT
Sbjct: 255 DRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVT 314

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           +  +I+ L K G+ ++   +L  M +R    N   Y++LI G    G    A +L+  M 
Sbjct: 315 FNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMP 374

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            KGC+P+ + Y+ LI+G C+  K +EA ++   M+  G   +  TY +L+ G F+ GK  
Sbjct: 375 SKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVG 434

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A +++  M       +   Y + ++GLC++G L EA  ++ ++ S   K D+  ++ +I
Sbjct: 435 DAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLI 494

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GLC AG +E A +LF ++   + + QPDV TYNI+++  C+   +  +  L   M   G
Sbjct: 495 DGLCKAGKLETAWELFEKLP--QEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552

Query: 575 CDPDLVT 581
           C PD +T
Sbjct: 553 CTPDKIT 559



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/538 (28%), Positives = 256/538 (47%), Gaps = 37/538 (6%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEF------YNHIVNAKHMNILPNTLTFNLVIKTV--- 202
           +TV S +S++   +   L+  +         ++  V+ K +N+ P      +  +     
Sbjct: 6   KTVPSASSIVKPNLSSSLFTHSPTIPSSNPHFSSAVHHKSLNVSPQNFNTPISFQQQLSM 65

Query: 203 ----CRLGLVD--NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
               C+ G +    A Q F  M   N  P + ++  L+ GL K     +   L ++M++ 
Sbjct: 66  FLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLS 125

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P   T N+L+N LC    +G    ++  +  +G +P+ VTY TLI GLC++  + KA
Sbjct: 126 GISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKA 185

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM--EERKFHVN----EYIY 370
             L  RM    C PN +TYGT++ GL + G      ++   M  +   + +N       Y
Sbjct: 186 ALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISY 245

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S +I  L K+ + ++A  L+++M  +G  P  + Y++LI G C  GK +EA+ +  EM+N
Sbjct: 246 SIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVN 305

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N  T++ L+    + GK  +A ++ + M +   V N + Y+ LI G C  G L  
Sbjct: 306 QGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNS 365

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           AR ++  M S+GC+PDV+ Y+ +I+G C    VEEA+KL+N M  L+   +PDV TY  L
Sbjct: 366 ARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGM--LQVGKRPDVKTYGAL 423

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE------------KLEAPQD 598
           L  L +   +  +  L   M   G   DL    IFL  L +            KL++   
Sbjct: 424 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 483

Query: 599 GTDF--LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             D    N L   L K  +    +++ E + Q+ L P   T+  ++ E CR  ++  A
Sbjct: 484 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA 541



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 211/396 (53%), Gaps = 8/396 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR------NCEPDIYTYCTLMDGLCKENRL 243
           PN +T+  ++K +CR G +  A++L +EM         N +P + +Y  ++D LCK+ R 
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEA  L +EM+V G  PT +++  LI+G C  G+   A +L + M  +G  PN VT+N L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVL 318

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  LC +G + +A  LL+ M+    +PN +TY ++I G   +G       + +SM  +  
Sbjct: 319 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 378

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+ LI+G  K  K E+AMKL+  M++ G +P+   Y AL+ GL + GK  +A++
Sbjct: 379 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 438

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +   M   G   + + Y   + G  ++G   +A+E++  +   N   +  C++ LI GLC
Sbjct: 439 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLC 498

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GKL  A  ++ ++     +PDVV Y+ MIH  C  G V +A  LF +M   +    PD
Sbjct: 499 KAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME--KNGCTPD 556

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
             TY  L+    +   +   ++LL+ M+ R    D+
Sbjct: 557 KITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 219/418 (52%), Gaps = 4/418 (0%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + K     H + +A  LF T + +  C     ++ +++  + + G    AL+ +  
Sbjct: 168 TYTTLIKGLCMEHRISKAALLF-TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQE 226

Query: 180 IVNAKHM---NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           ++N   +   N  P  ++++++I  +C+    D A  LF EM V+   P + +Y +L+ G
Sbjct: 227 MLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHG 286

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C   + +EA  L +EM   G  P  VTFNVLI+ LCK G++  A  L++ M  +G +PN
Sbjct: 287 FCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPN 346

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            +TYN+LI G CL G+L+ A  L   M +  C P+ + Y  +ING  K  +  +  ++  
Sbjct: 347 LLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYN 406

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +     +   Y  L++GLF+ GK  DA KL+  M   G   +  +Y   ++GLC+ G
Sbjct: 407 GMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNG 466

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
              EA E+  ++ +     +   ++ L+ G  ++GK   A E+++ + +     + V Y+
Sbjct: 467 CLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYN 526

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           ++IH  C  G++ +A +++ +M   GC PD + Y+++I G   +  +E+ ++L + M+
Sbjct: 527 IMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMV 584


>gi|297740791|emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 162/560 (28%), Positives = 261/560 (46%), Gaps = 101/560 (18%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E  F+ I +  G+A +V + I++   ++ +F    ++K FNS+L+V+++E +   A EFY
Sbjct: 11  ESIFVTIVRGLGRARMVRQMIKVLD-LITKFGENPSLKIFNSILDVLVKEDI-DLAREFY 68

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
                                                 ++M +     D YT+  LM GL
Sbjct: 69  R-------------------------------------KKMMMNGVSGDDYTFGILMKGL 91

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           C  NR+ +A  LL  M+  G  P  V +N +I+ LCKNG++GRA  L++ M      P++
Sbjct: 92  CLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMIHALCKNGKVGRARSLMNEMV----EPSD 147

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           VT+N LI   C + NL +A+ LL++  +   +P+ VT   ++  L K GR  +G  VL  
Sbjct: 148 VTFNVLISAYCQEENLVQALVLLEKSFSMGFVPDVVTATKVVGILCKAGRVTEGVEVLER 207

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           +E     V+   Y+TLI G    GKA+   ++ K M  KGC PN   Y+ L  G C  G 
Sbjct: 208 VESMGGVVDVVAYNTLIKGFCMLGKAKVGHRVLKDMEIKGCLPNVDTYNILASGYCDSGM 267

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN-------CVY 470
            D A ++  +M  +G   N  TY +L++G    G+     +I + M ++          Y
Sbjct: 268 LDSAIDLFNDMKTDGINWNFMTYDTLIRGLCSGGRMEDGFKILELMEESRGGAGGRISPY 327

Query: 471 NEVCY----------------------------SVLIHGLCEDGKLREARMVWTQMLSRG 502
           N + Y                            S+ I G C +G + +A+ V+ QM+  G
Sbjct: 328 NSIIYGLYKKNQFEEALEFLTKMEKLFPRAVDRSLRILGFCNEGSIGDAKRVYDQMIKEG 387

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P V+ Y  +IHG C  G+V EA +L NEM  ++    P   T+N L++A C Q  +  
Sbjct: 388 GVPSVLVYVCLIHGFCQDGNVREAFELINEM--VDHGYFPTAPTFNALISAFCGQGKVGS 445

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           ++ L+  M+ RGC PD+ + +  + AL  K        DF  + A+RLF +         
Sbjct: 446 ALKLMEDMVGRGCLPDMGSYSPMVDALCNK-------GDF--QKAVRLFLQ--------- 487

Query: 623 VEVMLQKFLSPQTSTWERVV 642
              M++K + P  STW  ++
Sbjct: 488 ---MVEKDILPDYSTWNSML 504



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 144/303 (47%), Gaps = 16/303 (5%)

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+E  + T++ GL     + + + +LD +      P+   + +I++ LVK    +D 
Sbjct: 6   GSPPDESIFVTIVRGLGRARMVRQMIKVLDLITKFGENPSLKIFNSILDVLVK--EDIDL 63

Query: 352 ARVLM--SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           AR      M       ++Y +  L+ GL    +  DA KL + M  +G  PNTV+Y+ +I
Sbjct: 64  AREFYRKKMMMNGVSGDDYTFGILMKGLCLTNRIGDAFKLLQVMKSRGKTPNTVIYNTMI 123

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
             LC+ GK   A  ++ EM+      +  T++ L+  + +     +A+ + +       V
Sbjct: 124 HALCKNGKVGRARSLMNEMVE----PSDVTFNVLISAYCQEENLVQALVLLEKSFSMGFV 179

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + V  + ++  LC+ G++ E   V  ++ S G   DVVAY+++I G C  G  +   ++
Sbjct: 180 PDVVTATKVVGILCKAGRVTEGVEVLERVESMGGVVDVVAYNTLIKGFCMLGKAKVGHRV 239

Query: 530 FNEM---LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             +M    CL     P+V TYNIL +  C    +  +IDL N M   G + + +T +  +
Sbjct: 240 LKDMEIKGCL-----PNVDTYNILASGYCDSGMLDSAIDLFNDMKTDGINWNFMTYDTLI 294

Query: 587 TAL 589
             L
Sbjct: 295 RGL 297


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 236/460 (51%), Gaps = 19/460 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T+T N ++K +C  G V  ++    ++  +  + D  +Y TL++GLCK      AV L
Sbjct: 78  PDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKL 137

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  ++     P  V +N +I+GLCK+  +  A  L   M  +G  P+ +TY TLI+G CL
Sbjct: 138 LRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCL 197

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L  A SLLD M+     P    Y  +IN L K G   +   +L  M +         
Sbjct: 198 LGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVT 257

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YSTL+ G    G+ ++A +++  M++ G  PN   Y+ +I+GLC+  + DEA  +L EM+
Sbjct: 258 YSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREML 317

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +     +  TY+SL+ G  +SG+   A+ +  +M       + V Y+ L+  LC++  L 
Sbjct: 318 HKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLD 377

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML----CLEPKSQPDVF 545
           +A  ++ +M  RG +P +  Y+++I GLC  G ++ A +LF  +L    C+      DV+
Sbjct: 378 KATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCI------DVW 431

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           TY ++++ LCK+     ++ + + M D GC P+ VT  I + +L EK     D  D   +
Sbjct: 432 TYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEK-----DENDKAEK 486

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
           L   +  +      FK+ +V    F+  +    E+++ E+
Sbjct: 487 LLHEMIAKGLLVLDFKVADV----FVQNENDKAEKLLHEM 522



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/419 (31%), Positives = 233/419 (55%), Gaps = 5/419 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           + N+++  +  +G   ++L F++ +V A+   +  + +++  ++  +C++G    A++L 
Sbjct: 82  TLNTLMKGLCLKGEVKKSLHFHDKVV-AQGFQM--DHVSYGTLLNGLCKIGETRCAVKLL 138

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R +  R+  P++  Y T++DGLCK+  ++EA  L  EM   G FP  +T+  LI G C  
Sbjct: 139 RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLL 198

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A  L+D M LK   P    YN LI+ LC +GN+ +A +LL  M      P  VTY
Sbjct: 199 GQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTY 258

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G   +G   +  ++  +M +   + N Y Y+ +I+GL K  + ++AM L ++M+ 
Sbjct: 259 STLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH 318

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P+TV Y++LIDGLC+ G+   A  ++ EM + G  A+  TY+SL+    ++    K
Sbjct: 319 KNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDK 378

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A  ++  M +         Y+ LI GLC+ G+L+ A+ ++  +L +GC  DV  Y+ MI 
Sbjct: 379 ATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMIS 438

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           GLC  G  +EAL + ++M   +    P+  T+ I++ +L ++     +  LL+ M+ +G
Sbjct: 439 GLCKEGMFDEALAIKSKM--EDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 495



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 227/436 (52%), Gaps = 11/436 (2%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHM---NILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           FN +L  + +   Y  A+        +K M    I  N +T N++I   C LG +  +  
Sbjct: 13  FNKILGSLAKMKQYLTAISL------SKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  ++     +PD  T  TLM GLC +  + +++   D++   G     V++  L+NGLC
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K GE   A KL+  +  +   PN V YNT+I GLC    +++A  L   M A    P+ +
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T+I G   LG+ +    +L  M  +  +   YIY+ LI+ L KEG  ++A  L   M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            ++G KP  V YS L+DG C VG+   A++I   M+  G   N ++Y+ ++ G  +  + 
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ + ++M   N V + V Y+ LI GLC+ G++  A  +  +M  RG   DVV Y+S+
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 366

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           +  LC   ++++A  LF +M   E   QP ++TY  L++ LCK   + ++ +L   ++ +
Sbjct: 367 LDALCKNQNLDKATALFMKM--KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 424

Query: 574 GCDPDLVTCNIFLTAL 589
           GC  D+ T  + ++ L
Sbjct: 425 GCCIDVWTYTVMISGL 440



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/430 (30%), Positives = 214/430 (49%), Gaps = 23/430 (5%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P I  +  ++  L K  +   A+ L  +M+V G     VT N+LIN  C  G++  +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           +  +   G  P+ +T NTL+ GLCLKG + K++   D++VA     + V+YGT++NGL K
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           +G      ++L  +E+R    N  +Y+T+I GL K+    +A  L+ +M  +G  P+ + 
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ LI G C +G+   A  +L EMI        + Y+ L+    + G   +A  +   M 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           K       V YS L+ G C  G+++ A+ ++  M+  G  P+V +Y+ MI+GLC    V+
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA+ L  EM  L     PD  TYN L++ LCK   I+ +++L+N M  RG   D+VT   
Sbjct: 308 EAMNLLREM--LHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            L AL +     +         A  LF + +  G            + P   T+  ++  
Sbjct: 366 LLDALCKNQNLDK---------ATALFMKMKERG------------IQPTMYTYTALIDG 404

Query: 645 LCRPKRIQAA 654
           LC+  R++ A
Sbjct: 405 LCKGGRLKNA 414



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 203/402 (50%), Gaps = 6/402 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  + FN ++ ++ ++     AI L ++M V+    +  T   L++  C   ++  +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L ++   G  P  +T N L+ GLC  GE+ ++    D +  +G   + V+Y TL++GLC 
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEY 368
            G    AV LL  +      PN V Y TII+GL K  + V+ A  L S M+ R    +  
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCK-DKLVNEAYDLYSEMDARGIFPDAI 186

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+TLI G    G+   A  L  +M+ K   P   +Y+ LI+ LC+ G   EA+ +L  M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G      TYS+LM G+   G+   A +I+  M +     N   Y+++I+GLC+  ++
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRV 306

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP-DVFTY 547
            EA  +  +ML +   PD V Y+S+I GLC +G +  AL L NEM     + QP DV TY
Sbjct: 307 DEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM---HHRGQPADVVTY 363

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             LL+ALCK  N+  +  L   M +RG  P + T    +  L
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGL 405


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 252/519 (48%), Gaps = 12/519 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F+    +L R+R    +    SF  I    GK   V+EA+ LF  M
Sbjct: 55  AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 114

Query: 145 VDEFHCKRTVKSFNSVLNVIIQE-GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
                 K+  +  +S  N+II    L  R  E Y  +   +H ++ PN LT N+++  +C
Sbjct: 115 ------KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 168

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +   ++ A ++F     R C PD  TYC+L+DGL K+ ++DEA  L ++M   G    PV
Sbjct: 169 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPV 228

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +  LI     +G      K+   +  +GC P+    NT +  +   G ++K   + + +
Sbjct: 229 VYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 288

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            +   +P+  +Y  +I+GL K G+A + + +  +M+++ F ++   Y+ ++ G  K GK 
Sbjct: 289 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 348

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A ++ ++M EK  +P    Y A++DGL ++ + DEA  +  E  + G   N   YSSL
Sbjct: 349 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 408

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + GF + G+  +A  I ++M K     N   ++ L+  L +  ++ EA + +  M    C
Sbjct: 409 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 468

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P+   YS +I+GLC      +A   + +M   +    P+V TY  +++ L K  NI+ +
Sbjct: 469 PPNTYTYSILINGLCRVQKYNKAFVFWQDM--QKQGLVPNVVTYTTMISGLAKVGNITDA 526

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALK---EKLEAPQDG 599
             L       G  PD  + N  +  +      +EA Q G
Sbjct: 527 YSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQAG 565



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 234/488 (47%), Gaps = 78/488 (15%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A +F++ +   K   + P+ +++  +I  +C+ G +  A +LF +M      P  Y Y T
Sbjct: 2   AWKFFHEL---KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNT 58

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           ++ G     R ++A  LL+ ++  GC P+ V+FN ++  L K  ++  A  L + M  K 
Sbjct: 59  MIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKD 117

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM----------------------------- 323
             PN  TYN +I  LCL G +++A  +LD M                             
Sbjct: 118 AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAY 177

Query: 324 ----VASK--CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
                AS+  C P+ VTY ++I+GL K G+  +  R+   M +   + N  +Y++LI   
Sbjct: 178 KIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNF 237

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVV--------------------------------- 404
           F  G+ ED  K++K+++ +GCKP+  +                                 
Sbjct: 238 FIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDV 297

Query: 405 --YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
             YS LI GL + G+  E   I   M   G A +A  Y++++ GF +SGK HKA EI ++
Sbjct: 298 RSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEE 357

Query: 463 MAKNNCVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           M K  CV   V  Y  ++ GL +  +L EA M++ +  S+G + +VV YSS+I G    G
Sbjct: 358 M-KEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVG 416

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            ++EA  +  EM  ++    P+V+T+N LL+AL K   I+ ++    SM +  C P+  T
Sbjct: 417 RIDEAYLILEEM--MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYT 474

Query: 582 CNIFLTAL 589
            +I +  L
Sbjct: 475 YSILINGL 482


>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 472

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 134/410 (32%), Positives = 217/410 (52%), Gaps = 13/410 (3%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
            Y    S+F  ++    ++  FK+ E ++ RM+ E  VV E   + I + YG+ H   ++
Sbjct: 46  GYLHDQSSFGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDS 105

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           +R+FH M D F C  + K++ +VL ++++E   + A +FY    N + + + P   + N+
Sbjct: 106 LRVFHKMKD-FDCDPSQKAYVTVLAILVEENQLNLAFKFYK---NMREIGLPPTVASLNV 161

Query: 198 VIKTVCR-LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           +IK +CR  G VD  +++F EMP R C+PD YTY TL+ GLC+  R+DEA  L  EM   
Sbjct: 162 LIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEK 221

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            C PT VT+  LINGLC +  +  A + V+ M  KG  PN  TY++L+ GLC  G   +A
Sbjct: 222 DCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQA 281

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           + L + M+A  C PN VTY T+I GL K  +  +   +L  M  +    +  +Y  +ISG
Sbjct: 282 MELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVY-------SALIDGLCRVGKPDEAEEILFEMI 429
                K  +A     +M+  G  PN + +       + ++ GLC    P  A  +   M 
Sbjct: 342 FCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-TNYPSRAFTLYLSMR 400

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           + G +    T  SL+K   + G+  KAV++  ++  + C+ N+  + +LI
Sbjct: 401 SRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLI 450



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 189/368 (51%), Gaps = 12/368 (3%)

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +++++F +M   +C+P    Y T++  L +EN+L+ A      M+  G  PT  + NVLI
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163

Query: 270 NGLCKN-GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
             LC+N G +    K+   M  +GC P+  TY TLI GLC  G +D+A  L   MV   C
Sbjct: 164 KALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P  VTY ++INGL       +  R +  M+ +    N + YS+L+ GL K+G++  AM+
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAME 283

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L++ MM +GC+PN V Y+ LI GLC+  K  EA E+L  M   G   +A  Y  ++ GF 
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSV-------LIHGLCEDGKLREARMVWTQMLSR 501
              K  +A     +M       N + +++       ++ GLC +   R A  ++  M SR
Sbjct: 344 AVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCTNYPSR-AFTLYLSMRSR 402

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQS 558
           G   +V    S++  LC  G  ++A++L +E++   C+  K    +   + L N +  ++
Sbjct: 403 GISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCIPNKGTWKLLIGHTLDNTIVGEA 462

Query: 559 NISHSIDL 566
           + S   DL
Sbjct: 463 SDSLLRDL 470



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 191/395 (48%), Gaps = 24/395 (6%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D  ++  ++  L   N+   A  ++  M+++ C    V+ ++L++ +C+    GR  +  
Sbjct: 50  DQSSFGYMVSRLVSANKFKAAEDIVARMKIENCV---VSEDILLS-ICRG--YGRVHRPF 103

Query: 286 DNM--FLK----GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           D++  F K     C P++  Y T++  L  +  L+ A      M      P   +   +I
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163

Query: 340 NGLVKLGRAVD-GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
             L +    VD G ++   M +R    + Y Y TLISGL + G+ ++A KL+ +M+EK C
Sbjct: 164 KALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P  V Y++LI+GLC     DEA   + EM   G   N FTYSSLM G  + G+  +A+E
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAME 283

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +++ M    C  N V Y+ LI GLC++ K++EA  +  +M  +G KPD   Y  +I G C
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNI-------LLNALCKQSNISHSIDLLNSMM 571
                 EA    +EM+       P+  T+NI       ++  LC     S +  L  SM 
Sbjct: 344 AVSKFREAANFLDEMIL--GGITPNRLTWNIHVKTSNEVVRGLCTNYP-SRAFTLYLSMR 400

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            RG   ++ T +  +  L +K E  Q     ++E+
Sbjct: 401 SRGISVEVETLDSLVKCLCKKGEF-QKAVQLVDEI 434



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 132/287 (45%), Gaps = 24/287 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +  ++S L    K + A  +  +M  + C  +  +  ++  G  RV +P ++  +  +M 
Sbjct: 54  FGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMK 113

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE-DGKL 488
           +  C  +   Y +++    E  + + A + +K+M +          +VLI  LC  DG +
Sbjct: 114 DFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTV 173

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
                ++ +M  RGC PD   Y ++I GLC  G ++EA KLF EM  +E    P V TY 
Sbjct: 174 DAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM--VEKDCAPTVVTYT 231

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            L+N LC   N+  ++  +  M  +G +P++ T +  +           DG         
Sbjct: 232 SLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLM-----------DG--------- 271

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            L K  R+    ++ E+M+ +   P   T+  ++  LC+ ++IQ A+
Sbjct: 272 -LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 14/206 (6%)

Query: 85  TFYSLIQHYANSG-DFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ SL+      G   +++E+    M R  R  +  ++  +     K   ++EA+ L   
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM-VTYTTLITGLCKEQKIQEAVELLDR 322

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT-- 201
           M +    K     +  V++       +  A  F + ++      I PN LT+N+ +KT  
Sbjct: 323 M-NLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILG---GITPNRLTWNIHVKTSN 378

Query: 202 -VCRLGLVDN----AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            V R GL  N    A  L+  M  R    ++ T  +L+  LCK+    +AV L+DE+  D
Sbjct: 379 EVVR-GLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTD 437

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAA 282
           GC P   T+ +LI     N  +G A+
Sbjct: 438 GCIPNKGTWKLLIGHTLDNTIVGEAS 463


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  229 bits (583), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 149/481 (30%), Positives = 234/481 (48%), Gaps = 26/481 (5%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  ++ ++I+ +C    V  A+ L   M    C P+++TY  L+ GLCKE R+ +A +LL
Sbjct: 252 NEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLL 311

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM   G  P+  T+N +I+G CK+G L  A  +   M   GC P++ TYN+LIHGLC  
Sbjct: 312 DEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-G 370

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G  D+A  LL+  +A    P  +T+  IING  K  +  D  RV   M   K  ++   Y
Sbjct: 371 GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAY 430

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             LIS L K+ + ++A     ++   G  PN V+Y+++ID  C+VGK   A E+     +
Sbjct: 431 GVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEH 490

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC  NA+TYSSL+ G  +  K HKA+ +   M ++      + Y+ LI G C+  +   
Sbjct: 491 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 550

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++  M   G  PD  AY+ +   LC +G  EEA     +   +  K      TY  L
Sbjct: 551 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTK-----VTYTSL 605

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAI 608
           ++   K  N   +  L+  M++ GC  D  T ++ L AL  ++KL    +    L+++ +
Sbjct: 606 VDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKL---NEALSILDQMTL 662

Query: 609 RLFKRQRTSGGFKIVEV-----------MLQKFLS----PQTSTWERVVQELCRPKRIQA 653
           R  K    +    I E+           M  + +S    P   T+   +   C+  RI+ 
Sbjct: 663 RGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEE 722

Query: 654 A 654
           A
Sbjct: 723 A 723



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 281/582 (48%), Gaps = 22/582 (3%)

Query: 73  TPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH 132
           +P L +Y L       LI+     G      ++L  M R   V    ++  +   Y K+ 
Sbjct: 285 SPNLHTYTL-------LIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSG 337

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
            +++A+ +  T+++   C     ++NS+++ +   G    A E  N    A      P  
Sbjct: 338 RLKDALGI-KTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLN---GAIARGFSPTV 392

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +TF  +I   C+   +D+A+++   M    C+ D+  Y  L+  L K++RL EA   L+E
Sbjct: 393 ITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNE 452

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +  +G  P  V +  +I+  CK G++G A ++      +GC PN  TY++LI+GL     
Sbjct: 453 IFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQK 512

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           L KA++L+ +M      P  +TY T+I G  K     +  R+   ME+     +E  Y+ 
Sbjct: 513 LHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNV 572

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L   L K G+AE+A   +  +++KG     V Y++L+DG  + G  + A  ++ +M+N G
Sbjct: 573 LTDALCKSGRAEEA---YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEG 629

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C A++ TYS L++   +  K ++A+ I   M       N V Y+++I  + ++GK   A+
Sbjct: 630 CKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAK 689

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++ +M+S G KP  + Y+  I   C  G +EEA  L  EM        PDV TYN+ +N
Sbjct: 690 SMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEM--ERNGVAPDVVTYNVFIN 747

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
                  +  +   L  M+D  C+P+  T   +   LK  L+       +++   +  + 
Sbjct: 748 GCGHMGYMDCAFSTLKRMIDASCEPNYWT---YWLLLKHFLKMSLANAHYVDTSGMWNWI 804

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  T   ++++E M++  L+P   T+  ++   C+  R++ A
Sbjct: 805 KLDTV--WQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEA 844



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 224/460 (48%), Gaps = 24/460 (5%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +NL ++++ R  + ++  +L+ ++      PD  TY T++   CKE  L  A      ++
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G      T N L+ G C+ G+L +A  L+  M L GC  NE +Y  LI GLC    + 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A+ LL  M+   C PN  TY  +I GL K GR  D   +L  M  R    + + Y+ +I
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G  K G+ +DA+ +   M   GC P+   Y++LI GLC  GKPDEAEE+L   I  G +
Sbjct: 331 DGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCG-GKPDEAEELLNGAIARGFS 389

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
               T+++++ G+ ++ K   A+ +   M  + C  +   Y VLI  L +  +L+EA+  
Sbjct: 390 PTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDT 449

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             ++ + G  P+VV Y+S+I   C  G V  AL++F   L      +P+ +TY+ L+  L
Sbjct: 450 LNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFK--LTEHEGCRPNAWTYSSLIYGL 507

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
            +   +  ++ L+  M + G  P ++T   + T ++ +                   K+ 
Sbjct: 508 IQDQKLHKAMALITKMQEDGITPGVIT---YTTLIQGQC------------------KKH 546

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                F++ E+M Q  L+P    +  +   LC+  R + A
Sbjct: 547 EFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA 586



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 227/517 (43%), Gaps = 59/517 (11%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  I  AY K   V  A+ +F  + +   C+    +++S++  +IQ+   H+A+     I
Sbjct: 465 YTSIIDAYCKVGKVGAALEVF-KLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMAL---I 520

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +   I P  +T+  +I+  C+    DNA +LF  M      PD   Y  L D LCK 
Sbjct: 521 TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKS 580

Query: 241 NRLDEA--------------------------------VLLLDEMQVDGCFPTPVTFNVL 268
            R +EA                                  L+++M  +GC     T++VL
Sbjct: 581 GRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVL 640

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           +  LCK  +L  A  ++D M L+G   N V Y  +I  +  +G  D A S+ + M++S  
Sbjct: 641 LQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH 700

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+ +TY   I+   K+GR  +   ++  ME      +   Y+  I+G    G  + A  
Sbjct: 701 KPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFS 760

Query: 389 LWKQMMEKGCKPNTVVYSALI----------------DGLCRVGKPDEAEEILFEMINNG 432
             K+M++  C+PN   Y  L+                 G+    K D   ++L  M+ +G
Sbjct: 761 TLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHG 820

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
               A TYSS++ GF ++ +  +A  +   M   +   NE  Y++LI   C+     +A 
Sbjct: 821 LNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAA 880

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
              T M+  G +P + +Y  +I GLC+ G  ++A  LF ++  LE     +   + IL +
Sbjct: 881 SFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDL--LEMDYNHNEVAWKILND 938

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPD-----LVTCNI 584
            L K  ++     LL++M +R C  D     +VT NI
Sbjct: 939 GLLKAGHVDICSQLLSAMENRHCRIDSETYSMVTNNI 975



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 191/409 (46%), Gaps = 19/409 (4%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +P  +N+ +  L +        KL   +  +G LP+ VTYNT+I   C +G+L  A    
Sbjct: 147 SPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYF 206

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             +  S    +  T   ++ G  + G       +LM M       NEY Y+ LI GL + 
Sbjct: 207 RLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCET 266

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
               +A+ L   M++ GC PN   Y+ LI GLC+ G+  +A  +L EM   G   + +TY
Sbjct: 267 RCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTY 326

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++++ G+ +SG+   A+ I   M  N C  ++  Y+ LIHGLC  GK  EA  +    ++
Sbjct: 327 NAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIA 385

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           RG  P V+ ++++I+G C A  +++AL++ + M  +  K + D+  Y +L++ L K+  +
Sbjct: 386 RGFSPTVITFTNIINGYCKAEKIDDALRVKSIM--ISSKCKLDLQAYGVLISVLIKKHRL 443

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTA---------------LKEKLEAPQDGTDFLNE 605
             + D LN +   G  P++V     + A               L E  E  +      + 
Sbjct: 444 KEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEH-EGCRPNAWTYSS 502

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           L   L + Q+      ++  M +  ++P   T+  ++Q  C+      A
Sbjct: 503 LIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNA 551



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 118/502 (23%), Positives = 217/502 (43%), Gaps = 64/502 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI              ++ +M+ +       ++  + +   K H  + A RLF  M
Sbjct: 499 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE-M 557

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +++       +++N + + + + G   RA E Y+ +V      ++   +T+  ++    +
Sbjct: 558 MEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVKK---GVVLTKVTYTSLVDGFSK 611

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF----- 259
            G  + A  L  +M    C+ D +TY  L+  LCK+ +L+EA+ +LD+M + G       
Sbjct: 612 AGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVA 671

Query: 260 ------------------------------PTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
                                         P+ +T+ V I+  CK G +  A  L+  M 
Sbjct: 672 YTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEME 731

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA- 348
             G  P+ VTYN  I+G    G +D A S L RM+ + C PN  TY  ++   +K+  A 
Sbjct: 732 RNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLAN 791

Query: 349 ---VDGA------------RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
              VD +            ++L  M +   +     YS++I+G  K  + E+A  L   M
Sbjct: 792 AHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHM 851

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + K   PN  +Y+ LI   C +   ++A   +  MI  G   +  +Y  L+ G  + G  
Sbjct: 852 LGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDY 911

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            KA  ++ D+ + +  +NEV + +L  GL + G +     + + M +R C+ D   YS +
Sbjct: 912 DKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETYSMV 971

Query: 514 IHGLCNAGSVEEALKLFNEMLC 535
            +      ++ EA  ++   +C
Sbjct: 972 TN------NIHEASGMYESYMC 987



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 181/428 (42%), Gaps = 31/428 (7%)

Query: 107  YRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII 165
            Y    +K VVL K ++  +   + KA   E A  L   MV+E  CK    +++ +L  + 
Sbjct: 587  YSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNE-GCKADSHTYSVLLQALC 645

Query: 166  QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP 225
            ++   + AL   + +       +  N + + ++I  + + G  D+A  +F EM     +P
Sbjct: 646  KQKKLNEALSILDQMT---LRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 702

Query: 226  DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
               TY   +   CK  R++EA  L+ EM+ +G  P  VT+NV ING    G +  A   +
Sbjct: 703  SAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTL 762

Query: 286  DNMFLKGCLPNEVTYNTLI-----------HGLCLKG-----NLDKAVSLLDRMVASKCM 329
              M    C PN  TY  L+           H +   G      LD    LL+RMV     
Sbjct: 763  KRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLN 822

Query: 330  PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
            P  VTY +II G  K  R  +   +L  M  +    NE IY+ LI         E A   
Sbjct: 823  PTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASF 882

Query: 390  WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
               M+E G +P+   Y  LI GLC  G  D+A+ +  +++      N   +  L  G  +
Sbjct: 883  VTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLK 942

Query: 450  SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            +G      ++   M   +C  +   YS++ + + E   + E+ M         C P +V 
Sbjct: 943  AGHVDICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYESYM---------CAP-LVG 992

Query: 510  YSSMIHGL 517
             + M H L
Sbjct: 993  QNRMQHAL 1000



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 141/310 (45%), Gaps = 28/310 (9%)

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           AVD  + +     ++  ++   Y+  +  L +    E   KL+ Q++++G  P+TV Y+ 
Sbjct: 129 AVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNT 188

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I   C+ G    A      +  +G   + +T ++L+ G+  +G   KA  +   M    
Sbjct: 189 MIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMG 248

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  NE  Y++LI GLCE   +REA ++   ML  GC P++  Y+ +I GLC  G + +A 
Sbjct: 249 CRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDAR 308

Query: 528 KLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            L +EM    P+    P V+TYN +++  CK   +  ++ +   M   GC+PD  T N  
Sbjct: 309 VLLDEM----PRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSL 364

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
           +  L      P +  + LN    R F                    SP   T+  ++   
Sbjct: 365 IHGLCGG--KPDEAEELLNGAIARGF--------------------SPTVITFTNIINGY 402

Query: 646 CRPKRIQAAI 655
           C+ ++I  A+
Sbjct: 403 CKAEKIDDAL 412



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 146/305 (47%), Gaps = 27/305 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+T+I    KEG    A + ++ + E G + +T   +AL+ G CR G   +A  +L  M 
Sbjct: 186 YNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMP 245

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             GC  N ++Y+ L++G  E+    +A+ +   M ++ C  N   Y++LI GLC++G++ 
Sbjct: 246 LMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIH 305

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +AR++  +M  RG  P V  Y++MI G C +G +++AL +  + L       PD +TYN 
Sbjct: 306 DARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGI--KTLMEGNGCNPDDWTYNS 363

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVT-CNI------------------FLTALK 590
           L++ LC       + +LLN  + RG  P ++T  NI                   + + K
Sbjct: 364 LIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSK 422

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
            KL+    G      L   L K+ R       +  +    LSP    +  ++   C+  +
Sbjct: 423 CKLDLQAYGV-----LISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGK 477

Query: 651 IQAAI 655
           + AA+
Sbjct: 478 VGAAL 482


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 156/591 (26%), Positives = 274/591 (46%), Gaps = 64/591 (10%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K    A  ++EA  +    + EF C   V S+N+++     E     ALE  + + + 
Sbjct: 236 LLKGLCDAKRLDEATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADD 295

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           + ++  P+ +++N VI    R G VD A  LF +M  R   PD+ TY T++DGLCK   +
Sbjct: 296 QGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVV 355

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A  +  +M   G  P+  T+N LI+G    G+     +L++ M      P+   Y  L
Sbjct: 356 DRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALL 415

Query: 304 IHGLCLKGN---------------------LDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +  LC  G                      +D+AV + D+M      PN V YG +I+ L
Sbjct: 416 LDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDAL 475

Query: 343 VKLGRAVD-----------------------GARVLMSMEERKFHVNEYIYSTLISGLFK 379
            KLGR  D                          ++  M ++   ++  +++TL+  L +
Sbjct: 476 CKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCR 535

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           EG+  +A +L + M+  G +P+ + Y+ L+DG C  G+ DEA ++L  M++ G   N FT
Sbjct: 536 EGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFT 595

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y++L+ G+ ++ +   A  + ++M  N    + V Y+ ++HGL + G+  EA+ ++  M+
Sbjct: 596 YNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMI 655

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           +   + D+  Y+ +++GLC    V+EA K+F + LC     Q  + T+NI++ AL K   
Sbjct: 656 NSRTQWDMYTYNIILNGLCKNNCVDEAFKMF-QSLC-SKGLQLHIITFNIMIGALLKGGK 713

Query: 560 ISHSIDLLNSMMDRGCDPDLVT----------------CNIFLTALKEKLEAPQDGTDFL 603
              ++DL  ++   G  PD+ T                  +  +A++E   AP   +  L
Sbjct: 714 KEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPN--SRML 771

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           N L  R   R   S     +  + +K  S + ST   ++    R +  Q A
Sbjct: 772 NALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLA 822



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/549 (24%), Positives = 247/549 (44%), Gaps = 86/549 (15%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDE--FHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           S+  + K +   +  EEA+ L H M D+    C   V S+N+V+N   +EG   +A   Y
Sbjct: 268 SYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKA---Y 324

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA-------------------------- 211
           N  +      I P+ +T+N VI  +C+  +VD A                          
Sbjct: 325 NLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGY 384

Query: 212 ---------IQLFREMPVRNCEPDIYTYCTLMDGLCKENR-------------------- 242
                    ++L  EM   + EPD + Y  L+D LCK  R                    
Sbjct: 385 LSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDA 444

Query: 243 -LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG---------------------- 279
            +DEAV + D+M+  G  P  V +  LI+ LCK G +                       
Sbjct: 445 MIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKW 504

Query: 280 -RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
            +A +LV  M  +G   + V +NTL+  LC +G + +A  L++ M+     P+ ++Y T+
Sbjct: 505 EKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTL 564

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           ++G    GR  + A++L  M       NE+ Y+TL+ G  K  + +DA  L ++M+  G 
Sbjct: 565 VDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGP 624

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ V Y+ ++ GL + G+  EA+E+   MIN+    + +TY+ ++ G  ++    +A +
Sbjct: 625 TPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFK 684

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +++ +       + + ++++I  L + GK  +A  ++  + + G  PDV  Y  +   L 
Sbjct: 685 MFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLI 744

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             GS+EE   LF+ M   E  + P+    N L+     + +IS +   L+ + ++    +
Sbjct: 745 KEGSLEELGVLFSAM--EENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLE 802

Query: 579 LVTCNIFLT 587
             T ++ ++
Sbjct: 803 ASTASMLIS 811



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 209/445 (46%), Gaps = 67/445 (15%)

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
           D   P   T+++LI   C+ G L     +   +   G   N + +N L+ GLC    LD+
Sbjct: 189 DKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDE 248

Query: 316 AVS-LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF---HVNEYIYS 371
           A + LL RM    C PN V+Y T++ G     RA +   +L  M + +      +   Y+
Sbjct: 249 ATNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYN 308

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           T+I+G F+EG+ + A  L+ QM+++G  P+ V Y+ +IDGLC+    D A+ +  +M++ 
Sbjct: 309 TVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDK 368

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  TY+ L+ G+  +GK  + V + ++M+ ++   +   Y++L+  LC++G+  EA
Sbjct: 369 GVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEA 428

Query: 492 RMVWTQMLSRGCKPD---------------------VVAYSSMIHGLCNAGSVEEALKLF 530
           R ++  ++ +G KPD                     VV Y ++I  LC  G V++A+  F
Sbjct: 429 RNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKF 488

Query: 531 NEM------LC---------------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           N+M      LC               L+   + DV  +N L+  LC++  +  +  L+  
Sbjct: 489 NQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIEL 548

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQK 629
           M+  G  PD+++ N  +           DG               RT    K+++VM+  
Sbjct: 549 MLRVGVRPDVISYNTLV-----------DGHCLTG----------RTDEAAKLLDVMVSI 587

Query: 630 FLSPQTSTWERVVQELCRPKRIQAA 654
            L P   T+  ++   C+ +RI  A
Sbjct: 588 GLKPNEFTYNTLLHGYCKARRIDDA 612



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 171/360 (47%), Gaps = 49/360 (13%)

Query: 316 AVSLLDRMV---ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
            +SL DRMV   + K  P+  TY  +I    ++GR   G  V   + +  + VN  +++ 
Sbjct: 176 GISLFDRMVRECSDKVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQ 235

Query: 373 LISGLFKEGKAEDAMK--LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           L+ GL    + ++A    LW+ M E GC PN V Y+ L+ G C   + +EA E+L  M +
Sbjct: 236 LLKGLCDAKRLDEATNILLWR-MPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMAD 294

Query: 431 N---GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           +    C  +  +Y++++ GFF  G+  KA  ++  M       + V Y+ +I GLC+   
Sbjct: 295 DQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQV 354

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A+ V+ QML +G KP    Y+ +IHG  + G  +E ++L  EM   +   +PD F Y
Sbjct: 355 VDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHD--LEPDCFIY 412

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
            +LL+ LCK    + + ++ +S++ +G  PD +                        + A
Sbjct: 413 ALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMI-----------------------DEA 449

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI---NKCWSNLYG 664
           + +F + R  G            LSP    +  ++  LC+  R+  AI   N+  + +YG
Sbjct: 450 VCIFDKMRQQG------------LSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYG 497



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 218/477 (45%), Gaps = 50/477 (10%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + T+  LI  Y ++G +K +  +L  M                      H +E    ++ 
Sbjct: 374 NGTYNCLIHGYLSTGKWKEVVRLLEEM--------------------STHDLEPDCFIYA 413

Query: 143 TMVDEFHCK--RTVKSFNSVLNVIIQEGLYHRAL--EFYNHIVNAKHMNILPNTLTFNLV 198
            ++D + CK  R  ++ N + + +I++G+   A+  E        +   + PN + +  +
Sbjct: 414 LLLD-YLCKNGRCTEARN-IFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGAL 471

Query: 199 IKTVCRLGLVDNAI-----------------------QLFREMPVRNCEPDIYTYCTLMD 235
           I  +C+LG VD+AI                       +L  EM  +    D+  + TLM 
Sbjct: 472 IDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMC 531

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
            LC+E R+ EA  L++ M   G  P  +++N L++G C  G    AAKL+D M   G  P
Sbjct: 532 DLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKP 591

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           NE TYNTL+HG C    +D A SLL  M+ +   P+ VTY TI++GL + GR  +   + 
Sbjct: 592 NEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELY 651

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
           ++M   +   + Y Y+ +++GL K    ++A K+++ +  KG + + + ++ +I  L + 
Sbjct: 652 LNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKG 711

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           GK ++A ++   +   G   +  TY  + +   + G   +   ++  M +N    N    
Sbjct: 712 GKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRML 771

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           + L+      G +  A    +++  +    +  + +SM+  L + G  ++  K   E
Sbjct: 772 NALVRRFLHRGDISRAGAYLSKLDEKNFSLE-ASTASMLISLYSRGEYQQLAKSLPE 827


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 151/546 (27%), Positives = 246/546 (45%), Gaps = 58/546 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF      +GK    E+A ++ H M+       T  +++ V+  +        A   +  
Sbjct: 459 SFARCLCGFGK---FEKAYKVIHEMMGNGFVPDT-STYSEVIGFLCNASRVENAFFLFKE 514

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   K   ++P+  T+ ++I    + G++  A     EM    CEP + TY TL+    K
Sbjct: 515 M---KGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD-----------NM 288
             ++  A  L + M   GCFP  +T+  LI+G CK+G + +A ++             +M
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDM 631

Query: 289 FLK-----GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           + K        PN VTY  L+ GLC    +  A  LL+ M    C PN + Y  +I+G  
Sbjct: 632 YFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K  +  +   V   M E  ++ N Y YS+LI  LFK+ + +  +K+  +M+E  C PN V
Sbjct: 692 KAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIV 751

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           +Y+ +IDGL +V K DEA +++  M   GC  N  TY++++ GF ++GK  K +E++++M
Sbjct: 752 IYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREM 811

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREA--------RMVWTQMLSRGCK----------- 504
               C  N V Y+VLI+  C  G L EA        +  W + +S  CK           
Sbjct: 812 GSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL 871

Query: 505 --------------PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
                         P ++ Y  +I     AG +E AL+L  E++            Y  L
Sbjct: 872 SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSL 931

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAI 608
           + +    S I H+ +L   M+  G  PDL T    L  L    + E     +D L ++ I
Sbjct: 932 IYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991

Query: 609 RLFKRQ 614
              +R+
Sbjct: 992 NWLRRE 997



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 212/467 (45%), Gaps = 33/467 (7%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG------LYHRALEFYNHI 180
           AY K+     A +L   M ++  CK     +N ++  I   G       +  A + YN +
Sbjct: 387 AYCKSDDFSYAYKLLKKM-EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEM 445

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           ++A  +    N ++F    + +C  G  + A ++  EM      PD  TY  ++  LC  
Sbjct: 446 LSAGTVLNKVNVVSF---ARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNA 502

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +R++ A  L  EM+  G  P   T+ +LI+   K G + +A   +D M   GC P  VTY
Sbjct: 503 SRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTY 562

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
            TLIH       +  A  L + M+A  C PN +TY  +I+G  K G      ++   M  
Sbjct: 563 TTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMR- 621

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                              +    D    +K       KPN V Y AL+DGLC+  K  +
Sbjct: 622 ------------------GDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKD 663

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A ++L  M  +GC  N   Y +L+ GF ++ K  +A E++  M ++    N   YS LI 
Sbjct: 664 ARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLID 723

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            L +D +L     V ++ML   C P++V Y+ MI GL      +EA KL   ML +E K 
Sbjct: 724 RLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKL---MLMMEEKG 780

Query: 541 -QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            +P+V TY  +++   K   +   ++L   M  +GC P+ VT  + +
Sbjct: 781 CKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLI 827



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 226/526 (42%), Gaps = 80/526 (15%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           + +PNT+ +N +I  +C     + A+     M   +C P++ TY  L+ G   + +L   
Sbjct: 303 DFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRC 362

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             +L  M  +GC+P+   FN L++  CK+ +   A KL+  M    C P  V YN LI  
Sbjct: 363 KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGS 422

Query: 307 LCLKGNL-----------------------------------------DKAVSLLDRMVA 325
           +C  G L                                         +KA  ++  M+ 
Sbjct: 423 ICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMG 482

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +  +P+  TY  +I  L    R  +   +   M+      + Y Y+ LI    K G  + 
Sbjct: 483 NGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQ 542

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A     +M+  GC+P  V Y+ LI    +  K   A E+   MI  GC  N  TY++L+ 
Sbjct: 543 AHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALID 602

Query: 446 GFFESGKGHKAVEIWKDM--------------AKNNCVY--NEVCYSVLIHGLCEDGKLR 489
           G+ +SG   KA +I+  M               KNN     N V Y  L+ GLC+  K++
Sbjct: 603 GYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVK 662

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +AR +   M   GC+P+ + Y ++I G C A  ++EA ++F++M  +E    P+V+TY+ 
Sbjct: 663 DARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKM--VEHGYNPNVYTYSS 720

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L++ L K   +   + +L+ M++  C P++V                        E+   
Sbjct: 721 LIDRLFKDKRLDLVLKVLSKMLENSCAPNIV---------------------IYTEMIDG 759

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           L K  +T   +K++ +M +K   P   T+  ++    +  ++   +
Sbjct: 760 LSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCL 805



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 238/503 (47%), Gaps = 56/503 (11%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           ST+  +I    N+   ++   +   M+    V    ++  +   + KA ++++A      
Sbjct: 490 STYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDE 549

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV +  C+ TV ++ ++++  ++      A E +  ++ AK     PN +T+  +I   C
Sbjct: 550 MVRD-GCEPTVVTYTTLIHAYLKAKKVSVANELFELMI-AK--GCFPNVITYTALIDGYC 605

Query: 204 RLGLVDNAIQLFREM-------------PVRNC---EPDIYTYCTLMDGLCKENRLDEAV 247
           + G ++ A Q++  M              ++N    +P++ TY  L+DGLCK +++ +A 
Sbjct: 606 KSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDAR 665

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LL+ M VDGC P  + ++ LI+G CK  +L  A ++   M   G  PN  TY++LI  L
Sbjct: 666 DLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL 725

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
                LD  + +L +M+ + C PN V Y  +I+GL K+ +  +  ++++ MEE+    N 
Sbjct: 726 FKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNV 785

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ +I G  K GK +  ++L+++M  KGC PN V Y+ LI+  C  G  DEA  +L E
Sbjct: 786 VTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEE 845

Query: 428 MIN---------------------------------NGCAANAFTYSSLMKGFFESGKGH 454
           M                                   NG A     Y  L+  F ++G+  
Sbjct: 846 MKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLE 905

Query: 455 KAVEIWKDM--AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            A+E+ K++  A  +    +  Y+ LI+      K+  A  ++  M+  G  PD+  +  
Sbjct: 906 VALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDLGTFVH 965

Query: 513 MIHGLCNAGSVEEALKLFNEMLC 535
           ++ GL      EEAL+L ++ LC
Sbjct: 966 LLMGLIRVRRWEEALQL-SDSLC 987



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 145/598 (24%), Positives = 253/598 (42%), Gaps = 115/598 (19%)

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           + + G Y R  E +   +      +L   L  N++I+  CR GL + A++    +     
Sbjct: 180 VFERGSYDRVPEEFLREIRGDDKEVLGKLL--NVLIRKCCRNGLWNVALEELGRLKDFGY 237

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
           +P   TY  L+    + ++LD A L+  EM   G      T       LCK G+   A  
Sbjct: 238 KPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALS 297

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           L++    +  +PN + YN +I GLC     ++A+  L+RM ++ C+PN  TY  ++ G +
Sbjct: 298 LIEK---EDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCL 354

Query: 344 ---KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
              +LGR     R+L  M     + +  I+++L+    K      A KL K+M +  CKP
Sbjct: 355 NKKQLGRC---KRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKP 411

Query: 401 NTVVYSALIDG-----------------------------------------LCRVGKPD 419
             VVY+ LI                                           LC  GK +
Sbjct: 412 GYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFE 471

Query: 420 EAEEILFEMINNG---------------CAA----NAF----------------TYSSLM 444
           +A +++ EM+ NG               C A    NAF                TY+ L+
Sbjct: 472 KAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILI 531

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             F ++G   +A     +M ++ C    V Y+ LIH   +  K+  A  ++  M+++GC 
Sbjct: 532 DCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCF 591

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM----------LCLEPKS----QPDVFTYNIL 550
           P+V+ Y+++I G C +G++E+A +++  M          +  + K+    +P+V TY  L
Sbjct: 592 PNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGAL 651

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNE--- 605
           ++ LCK   +  + DLL +M   GC+P+ +  +  +       KL+  Q+    + E   
Sbjct: 652 VDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGY 711

Query: 606 ---------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    L  RLFK +R     K++  ML+   +P    +  ++  L +  +   A
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEA 769


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 148/538 (27%), Positives = 255/538 (47%), Gaps = 44/538 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA-LEFYNHIVNA-KHMNILPN 191
           + +A+  F + + E      V SFN     I+  G   R   E  N ++   K   I  N
Sbjct: 13  LSDALGFFQSSISE----PNVSSFN-----ILLRGFAARDDFEVVNALLREMKARGITSN 63

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE-------PDIYTYCTLMDGLCKENRLD 244
             T  +++  +C    +D A+  F       C        PD  TY  ++DGL K    D
Sbjct: 64  GATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYD 123

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
             +   ++M    C PT +T+ VL++GLCK  ++ RA  + + M  KG  P+ + Y++LI
Sbjct: 124 AGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLI 183

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GL   G +D+A  L+D M+A    P  V Y +I+ GL K GR  +  + +  M  R+  
Sbjct: 184 DGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLR 243

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
                YS +++G    GK E+A  + ++M ++ C P+T+ Y+  I+ L  +G+ +EAE++
Sbjct: 244 PRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKV 303

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              M+  GC  +  TY  ++  F + G    A  + + M K     N   Y++++ G  +
Sbjct: 304 FETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVK 363

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             +L EA  ++ ++L  G  P  V Y+++I+ LC    ++EAL+L  EM   + + +P +
Sbjct: 364 SSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSI 423

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            TY+++++ L K      + DLL  M+D G  PD  T     T+L + L           
Sbjct: 424 VTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFT----YTSLIQTLAGA-------- 471

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
                     + S   +++E ML+  + P   T+  +VQ LCR     + ++  W  L
Sbjct: 472 ---------GKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-----SDVDAAWDLL 515



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 139/509 (27%), Positives = 237/509 (46%), Gaps = 51/509 (10%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           S+F  L++ +A   DF+ +  +L  M+         +   I  A      +++A+  F++
Sbjct: 30  SSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSYFNS 89

Query: 144 MVDEFHCK--RTVKSFNSVLNVIIQEGL-----YHRALEFYNHIVNAKHMNILPNTLTFN 196
             +E  C+    +++ +SV    I +GL     Y   LE+Y  +V +K     P  LT+ 
Sbjct: 90  RTEE-ACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASK---CEPTLLTYT 145

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           +++  +C+   V+ A  +F EM  +  +PDI  Y +L+DGL K  R+DEA  L+D M   
Sbjct: 146 VLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIAR 205

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL-------------------------- 290
           G  PT V +  ++ GLCK G +  A K +  M                            
Sbjct: 206 GPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEA 265

Query: 291 ---------KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
                    + C P+ ++Y   I  L   G  ++A  + + MV   C P+  TYG II+ 
Sbjct: 266 FAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDN 325

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
             K G       VL  M++     N YIY+ ++ G  K  + E+A++L++++++ G  P+
Sbjct: 326 FCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPS 385

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNG--CAANAFTYSSLMKGFFESGKGHKAVEI 459
           TV Y+ +I+ LC++ K DEA E+L EM         +  TYS ++ G  + G   +A ++
Sbjct: 386 TVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDL 445

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
             +M  N  + +   Y+ LI  L   GK+  A  +  +ML  G  PD   Y +++  LC 
Sbjct: 446 LAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR 505

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           +  V+ A  L  EM  +     P+ FT+ 
Sbjct: 506 S-DVDAAWDLLQEM--MRNGHTPNEFTFK 531



 Score =  139 bits (350), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 137/258 (53%), Gaps = 3/258 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T+++ + I+ +  +G  + A ++F  M  + C+PD++TY  ++D  CKE  +  A  +
Sbjct: 279 PDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHV 338

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M      P    + ++++G  K+  L  A +L   +   G LP+ VTYNT+I+ LC 
Sbjct: 339 LRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCK 398

Query: 310 KGNLDKAVSLLDRMVASK--CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
              +D+A+ LL  M   K    P+ VTY  II+GL K+G       +L  M +     + 
Sbjct: 399 LKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDC 458

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + Y++LI  L   GK   AM+L ++M++ G  P+   Y  L+  LCR    D A ++L E
Sbjct: 459 FTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQE 517

Query: 428 MINNGCAANAFTYSSLMK 445
           M+ NG   N FT+ ++ K
Sbjct: 518 MMRNGHTPNEFTFKAVEK 535



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 109/221 (49%), Gaps = 7/221 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+  +I ++   G   +   VL  M  +K  V    +I+  I   + K+  +EEA+ L+ 
Sbjct: 318 TYGIIIDNFCKEGSMAAATHVLRLM--DKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQ 375

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            ++ +     TV ++N+V+N + +      ALE    +   K   + P+ +T++++I  +
Sbjct: 376 RILKDGILPSTV-TYNTVINALCKLKKMDEALELLREMQRRKE-ELEPSIVTYSMIIHGL 433

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            ++G+ + A  L  EM      PD +TY +L+  L    ++  A+ LL+EM   G FP  
Sbjct: 434 GKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDD 493

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            T+  L+  LC++ ++  A  L+  M   G  PNE T+  +
Sbjct: 494 HTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAV 533


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 237/486 (48%), Gaps = 27/486 (5%)

Query: 172 RALEFYNHIVNAKHM---NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
           RA EF      A H+    + P+   F   I   C+ G V+ AI+LF +M      P++ 
Sbjct: 230 RATEF-QKCCEAFHVVCKGVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVV 288

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY T++DGL    R DEA +  ++M   G  PT +T+++L+ GL K   +G A  ++  M
Sbjct: 289 TYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEM 348

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             KG  PN + YN LI  L   G+L+KA+ + D MV+        TY T+I G  K G+A
Sbjct: 349 TEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQA 408

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
               R+L  M    F+VN+  ++++I  L      + A++   +M+ +   P   + + L
Sbjct: 409 DIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTL 468

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I GLC+ GK  +A E+  + +N G   +  T ++L+ G  E+GK  +   I K++     
Sbjct: 469 ISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGF 528

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           V + V Y+ LI G C + KL EA M   +M+ +G KPD   YS +I GL N   VEEA++
Sbjct: 529 VMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQ 588

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            + +  C      PDV+TY+++++  CK         L + MM     P+ V  N  + A
Sbjct: 589 FWGD--CKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGA 646

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                                  +  R S   ++ E M  K +SP ++T+  +++ +   
Sbjct: 647 ---------------------YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSII 685

Query: 649 KRIQAA 654
            R++ A
Sbjct: 686 SRVEEA 691



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/506 (25%), Positives = 251/506 (49%), Gaps = 14/506 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI---FIFKAYGKAHLVEEAIRLF 141
           T+ ++I     SG +   E  +++ +  +R V E + I    + K   KA  + +A  + 
Sbjct: 289 TYNTVIDGLGMSGRYD--EAFMFKEKMVERGV-EPTLITYSILVKGLTKAKRIGDAYCVL 345

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M ++      +  +N++++ +I+ G  ++A+E  + +V +K +++  +T  +N +IK 
Sbjct: 346 KEMTEKGFPPNVI-VYNNLIDSLIEAGSLNKAIEIKDLMV-SKGLSLTSST--YNTLIKG 401

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+ G  D A +L +EM       +  ++ +++  LC  +  D A+  + EM +    P 
Sbjct: 402 YCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPG 461

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
                 LI+GLCK+G+  +A +L      KG L +  T N L+HGLC  G L++   +  
Sbjct: 462 GGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQK 521

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKE 380
            ++    + + V+Y T+I+G     + +D A + M  M ++    + Y YS LI GL   
Sbjct: 522 EILGRGFVMDRVSYNTLISGCCG-NKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNM 580

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            K E+A++ W      G  P+   YS +IDG C+  + +E +++  EM++N    N   Y
Sbjct: 581 NKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVY 640

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+  +  SG+   A+E+ +DM       N   Y+ LI G+    ++ EA+++  +M  
Sbjct: 641 NHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRM 700

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G +P+V  Y+++I G    G + +   L  EM        P+  TY +++    +  N+
Sbjct: 701 EGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH--SKNVHPNKITYTVMIGGYARDGNV 758

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFL 586
           + +  LL+ M ++G  PD +T   F+
Sbjct: 759 TEASRLLHEMREKGIVPDSITYKEFI 784



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 193/434 (44%), Gaps = 58/434 (13%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P    F   IN  CK G++  A +L   M   G +PN VTYNT+I GL + G  D+A
Sbjct: 247 GVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEA 306

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
               ++MV     P  +TY  ++ GL K  R  D   VL  M E+ F  N  +Y+ LI  
Sbjct: 307 FMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDS 366

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L + G    A+++   M+ KG    +  Y+ LI G C+ G+ D AE +L EM++ G   N
Sbjct: 367 LIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVN 426

Query: 437 AFTYSS-----------------------------------LMKGFFESGKGHKAVEIWK 461
             +++S                                   L+ G  + GK  KAVE+W 
Sbjct: 427 QGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWL 486

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
                  + +    + L+HGLCE GKL E   +  ++L RG   D V+Y+++I G C   
Sbjct: 487 KFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNK 546

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            ++EA    +EM+  +   +PD +TY+IL+  L   + +  +I         G  PD+ T
Sbjct: 547 KLDEAFMFMDEMV--KKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYT 604

Query: 582 CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
            ++ +           DG            K +RT  G K+ + M+   L P T  +  +
Sbjct: 605 YSVMI-----------DGC----------CKAERTEEGQKLFDEMMSNNLQPNTVVYNHL 643

Query: 642 VQELCRPKRIQAAI 655
           +   CR  R+  A+
Sbjct: 644 IGAYCRSGRLSMAL 657



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 182/370 (49%), Gaps = 2/370 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  +F  VI  +C   + D+A++   EM +RN  P      TL+ GLCK  +  +AV L 
Sbjct: 426 NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELW 485

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +    G      T N L++GLC+ G+L    ++   +  +G + + V+YNTLI G C  
Sbjct: 486 LKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGN 545

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             LD+A   +D MV     P+  TY  +I GL+ + +  +  +     +      + Y Y
Sbjct: 546 KKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTY 605

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S +I G  K  + E+  KL+ +MM    +PNTVVY+ LI   CR G+   A E+  +M +
Sbjct: 606 SVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKH 665

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G + N+ TY+SL+KG     +  +A  + ++M       N   Y+ LI G  + G++ +
Sbjct: 666 KGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVK 725

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
              +  +M S+   P+ + Y+ MI G    G+V EA +L +EM   E    PD  TY   
Sbjct: 726 VECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEM--REKGIVPDSITYKEF 783

Query: 551 LNALCKQSNI 560
           +    KQ  +
Sbjct: 784 IYGYLKQGGV 793



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 198/410 (48%), Gaps = 6/410 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVD-EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
           + K Y K+   + A RL   M+   F+  +   SF SV+ ++    ++  AL F   ++ 
Sbjct: 398 LIKGYCKSGQADIAERLLKEMLSIGFNVNQG--SFTSVICLLCSHHMFDSALRFVGEML- 454

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
               N+ P       +I  +C+ G    A++L+ +   +    D  T   L+ GLC+  +
Sbjct: 455 --LRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGK 512

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L+E   +  E+   G     V++N LI+G C N +L  A   +D M  KG  P+  TY+ 
Sbjct: 513 LEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSI 572

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI GL     +++A+        +  +P+  TY  +I+G  K  R  +G ++   M    
Sbjct: 573 LIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNN 632

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              N  +Y+ LI    + G+   A++L + M  KG  PN+  Y++LI G+  + + +EA+
Sbjct: 633 LQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 692

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +L EM   G   N F Y++L+ G+ + G+  K   + ++M   N   N++ Y+V+I G 
Sbjct: 693 LLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 752

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             DG + EA  +  +M  +G  PD + Y   I+G    G V +A K  +E
Sbjct: 753 ARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 133/382 (34%), Positives = 204/382 (53%), Gaps = 4/382 (1%)

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G V +AIQ FR +   N +   +    L+D +   N          E+   G  P    +
Sbjct: 167 GFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYY 226

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           N+LIN  CK G + R AKL+ N   K G  P  V++NTLI+GLC   NLD+   L   M 
Sbjct: 227 NILINKFCKEGSI-RDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            ++  P+  TY  +I+GL K GR     ++   M++R    N   ++ LI G  +  + +
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            AM  + QM+  G KP+ V+Y+ L++GLC+VG  ++A +++ EM   G   +  TY++L+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+ + G    A+EI K M +   V + V ++ LI G C DG++R+A     +M+  G K
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD   Y+ +I G C  G+V+   KL  EM     K  P V TYN+L+N LCKQ  + ++ 
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHK--PGVITYNVLMNGLCKQGQMKNAN 523

Query: 565 DLLNSMMDRGCDPDLVTCNIFL 586
            LL +M++ G  PD +T NI L
Sbjct: 524 MLLEAMLNLGVTPDDITYNILL 545



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 215/415 (51%), Gaps = 6/415 (1%)

Query: 120 SFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           +F+F  +  AY  +  V +AI+ F  +V   + +        +L+ +I          FY
Sbjct: 153 NFVFDALMIAYWDSGFVSDAIQCFR-LVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFY 211

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           + I+        P    +N++I   C+ G + +A  +F E+  R   P   ++ TL++GL
Sbjct: 212 SEIL---EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGL 268

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CK   LDE   L   M+ +  +P   T++VLI+GLCK G L  A +L D M  +G  PN 
Sbjct: 269 CKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNG 328

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           +T+  LI G C    +D A++   +M+     P+ V Y T++NGL K+G      +++  
Sbjct: 329 ITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDE 388

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M       ++  Y+TLI G  KEG  E AM++ K M E+G   + V ++ALI G CR G+
Sbjct: 389 MRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGR 448

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             +AE  L EM+  G   +  TY+ ++ G+ + G      ++ K+M  N      + Y+V
Sbjct: 449 VRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNV 508

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           L++GLC+ G+++ A M+   ML+ G  PD + Y+ ++ G C  G  E+ LKL NE
Sbjct: 509 LMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 157/298 (52%), Gaps = 2/298 (0%)

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P    YN LI+  C +G++  A  + + +      P  V++ T+INGL K     +G
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            R+  +MEE + + + + YS LI GL KEG+ + A +L+ +M ++G +PN + ++ALIDG
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            CR  + D A     +M+  G   +   Y++L+ G  + G  +KA ++  +M       +
Sbjct: 338 QCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPD 397

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
           ++ Y+ LI G C++G L  A  +   M   G   D VA++++I G C  G V +A +   
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           EM+  E   +PD  TY ++++  CK+ N+     LL  M   G  P ++T N+ +  L
Sbjct: 458 EMV--EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGL 513



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 149/332 (44%), Gaps = 16/332 (4%)

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P    Y  +IN   K G   D   +   + +R        ++TLI+GL K    ++  +L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            K M E    P+   YS LI GLC+ G+ D AE++  EM   G   N  T+++L+ G   
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           S +   A+  +  M       + V Y+ L++GLC+ G + +AR +  +M   G KPD + 
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+++I G C  G +E A+++   M   E     D   +  L++  C+   +  +   L  
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMN--EEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458

Query: 570 MMDRGCDPDLVTCNIFLTA-------------LKE-KLEAPQDGTDFLNELAIRLFKRQR 615
           M++ G  PD  T  + +               LKE ++   + G    N L   L K+ +
Sbjct: 459 MVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQ 518

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                 ++E ML   ++P   T+  +++  C+
Sbjct: 519 MKNANMLLEAMLNLGVTPDDITYNILLEGHCK 550



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 104/260 (40%), Gaps = 53/260 (20%)

Query: 412 LCRVGKPDEAEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           + R GK D A  +   +++  G   + F + +LM  +++SG    A++ ++ +  +N   
Sbjct: 128 VSRKGK-DSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSN--- 183

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
               + +  HG                               ++  + N+ S       +
Sbjct: 184 ----FQIPFHGC----------------------------GYLLDKMINSNSPVTIWTFY 211

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA-- 588
           +E+L  E    P V  YNIL+N  CK+ +I  +  + N +  RG  P  V+ N  +    
Sbjct: 212 SEIL--EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 589 ----------LKEKLEAPQDGTD-FLNELAIR-LFKRQRTSGGFKIVEVMLQKFLSPQTS 636
                     LK+ +E  +   D F   + I  L K  R     ++ + M Q+ L P   
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 637 TWERVVQELCRPKRIQAAIN 656
           T+  ++   CR +RI +A+N
Sbjct: 330 TFTALIDGQCRSRRIDSAMN 349


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  228 bits (582), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 257/522 (49%), Gaps = 9/522 (1%)

Query: 67  DEIFNSTPKLGSYQLGDSTFY--SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           D  ++   KLG +    + F   +LI       D    E++   M      + + ++  +
Sbjct: 340 DSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSIL 399

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             ++ K  +++ A   F  M+++   + T+  +NS++N   + G    A   Y  ++N  
Sbjct: 400 IDSFCKRGMLDVAESYFGRMIED-GIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINE- 457

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              + P   TF  +I   C+   V+ A +L+REM  +   P +YT+  L+ GLC  N + 
Sbjct: 458 --GLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMA 515

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L DEM      PT VT+NV+I G CK   + +A +L+++M   G +P+  TY  LI
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLC  G +  A   +D +       NE+ Y  +++G    GR  +       M +R  +
Sbjct: 576 SGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGIN 635

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           ++   ++ LI G  K+   +    L K+M ++G +P++V+Y+++ID   + G   ++ E 
Sbjct: 636 MDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGEC 695

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L  M+   C  N  TY++ M G  + G+  +A  +++ M   N   N V Y   +  L +
Sbjct: 696 LDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTK 755

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +G ++EA  +  +ML +G   +   Y+ +I G C  G + EA K+ +EM   E    PD 
Sbjct: 756 EGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATKVLSEMT--ENGIFPDC 812

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            TY+ ++   C+  ++  +++L ++M+ +G +PD V  N+ +
Sbjct: 813 ITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLI 854



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 140/500 (28%), Positives = 226/500 (45%), Gaps = 18/500 (3%)

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           Y+ +V       LPN   +N +I  +C+   +D A  L++ M   N   +  TY  L+D 
Sbjct: 343 YDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDS 402

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            CK   LD A      M  DG   T   +N LING CK G+L  A  L   M  +G  P 
Sbjct: 403 FCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPT 462

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             T+ TLI G C    ++KA  L   M   +  P+  T+  +I GL       + +++  
Sbjct: 463 ATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFD 522

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M ERK    E  Y+ +I G  K    + A +L + M+  G  P+T  Y  LI GLC  G
Sbjct: 523 EMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTG 582

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           +   A++ + ++       N   YS+L+ G+   G+  +A+    +M +     + VC++
Sbjct: 583 RVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHA 642

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           VLI G  +   ++    +  +M  +G +PD V Y+SMI      GS +++ +  + M  +
Sbjct: 643 VLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLM--V 700

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
             K  P+V TY   +N LCK   I  +  L   M+     P+ VT   FL +L ++    
Sbjct: 701 TEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNM- 759

Query: 597 QDGTDFLNEL-------------AIRLF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           ++ TD  +E+              IR F K  R     K++  M +  + P   T+  ++
Sbjct: 760 KEATDLHHEMLKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTII 819

Query: 643 QELCRPKRIQAAINKCWSNL 662
            E CR   + AA+ + W  +
Sbjct: 820 YEHCRSGDVGAAV-ELWDTM 838



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 225/493 (45%), Gaps = 49/493 (9%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SLI  +   GD  + E +  +M  E       +F  +   Y K   VE+A +L+  M 
Sbjct: 431 YNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREM- 489

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           +E     +V +F +++  +        A + ++ +V  K   I P  +T+N++I+  C+ 
Sbjct: 490 NEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERK---IKPTEVTYNVMIEGYCKA 546

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
             +D A +L  +M      PD YTY  L+ GLC   R+  A   +D++         + +
Sbjct: 547 HNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCY 606

Query: 266 NVLINGLCKNGELGRA-------------------AKLVDN----------------MFL 290
           + L++G C  G L  A                   A L+D                 M+ 
Sbjct: 607 SALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYD 666

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G  P+ V Y ++I     +G+  K+   LD MV  KC PN VTY   +NGL K+G    
Sbjct: 667 QGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDR 726

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +   M       N   Y   +  L KEG  ++A  L  +M+ KG   NT  Y+ LI 
Sbjct: 727 AGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIR 785

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G C++G+  EA ++L EM  NG   +  TYS+++     SG    AVE+W  M +     
Sbjct: 786 GFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEP 845

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP---------DVVAYSSMIHGLCNAG 521
           + V +++LI+G C +G L +A  +   MLSRG KP         D+   + ++HG C  G
Sbjct: 846 DSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTG 905

Query: 522 SVEEALKLFNEML 534
            V+ AL+L++ ML
Sbjct: 906 EVDTALRLYHSML 918



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 209/428 (48%), Gaps = 10/428 (2%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN---RLD 244
           +LP   T + ++  + R+       ++F E      +PD YT   ++  LC+     R  
Sbjct: 179 LLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAK 238

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           E +L ++  + D    + VT+NVLI+GLCK G +  A ++  ++  KG   + VTY TL+
Sbjct: 239 EKILWMESNRFD---LSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLV 295

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            G C     D  + L++ MV    +P E     +++GL K G       +++ +    F 
Sbjct: 296 LGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFL 355

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            N ++Y+ LI+ L K    + A  L+K M       N V YS LID  C+ G  D AE  
Sbjct: 356 PNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESY 415

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              MI +G     + Y+SL+ G  + G    A  ++  M           ++ LI G C+
Sbjct: 416 FGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCK 475

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           D ++ +A  ++ +M  +   P V  ++++I+GLC+   + EA KLF+EM  +E K +P  
Sbjct: 476 DLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEM--VERKIKPTE 533

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDF 602
            TYN+++   CK  N+  + +LL  M+  G  PD  T    ++ L    ++ A +D  D 
Sbjct: 534 VTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDD 593

Query: 603 LNELAIRL 610
           L++  ++L
Sbjct: 594 LHKKNLKL 601



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 154/336 (45%), Gaps = 33/336 (9%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           LI       D K L  +L +M  +        +  +  AY K    +++      MV E 
Sbjct: 644 LIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTE- 702

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
            C   V ++ + +N + + G   RA   +  ++ A   NI PN++T+   + ++ + G +
Sbjct: 703 KCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTA---NISPNSVTYGCFLDSLTKEGNM 759

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
             A  L  EM ++    +  TY  L+ G CK  RL EA  +L EM  +G FP  +T++ +
Sbjct: 760 KEATDLHHEM-LKGLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTI 818

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I   C++G++G A +L D M  KG  P+ V +N LI+G C+ G LDKA  L + M++   
Sbjct: 819 IYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGL 878

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P                      R ++ +++R   V  +    L+ G    G+ + A++
Sbjct: 879 KP----------------------RQILQLQKRDLGVCNF----LMHGGCVTGEVDTALR 912

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           L+  M+ +  K +  ++  L   L   G   ++EE+
Sbjct: 913 LYHSMLTRAVKLSLEMWKCLY--LLSYGVISKSEEL 946


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 154/564 (27%), Positives = 271/564 (48%), Gaps = 27/564 (4%)

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
           MRR K      ++  +  A  +A   E A+ L   M  E   +  V  F +++  + +EG
Sbjct: 36  MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQM-QEVGYEVGVHLFTTLVRALAREG 94

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
               AL   + +   K   + P+ + +N+ I    + G VD A + F E+  +  +PD  
Sbjct: 95  QVADALALVDEV---KGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDV 151

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           +Y +++  LCK  RL EA  L  +M+ +   P    +N +I G    G    A KL++ +
Sbjct: 152 SYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERL 211

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             +GC+P+ V++N+++  L  K  +D+A+SL + M      PN  TY  II+ L   GR 
Sbjct: 212 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGRV 270

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +  R+L  ME      N    + ++  L K  K E+A K+++   ++GC P+ V Y +L
Sbjct: 271 EEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSL 330

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           IDGL + G+ DEA  +  +M++ G  AN   Y+SL++ FF  G+     +++K++ +  C
Sbjct: 331 IDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGC 390

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             +    +  +  + + G++ + RM++  + S G  PDV +YS +IHGL  AG   E   
Sbjct: 391 KPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSN 450

Query: 529 LFNEMLCLEPKSQP---DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           +F+ M     K Q    D   YN +++  CK   +  + ++L  M ++   P + T    
Sbjct: 451 IFHAM-----KQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAI 505

Query: 586 LTALK--EKL--------EAPQDGTDF----LNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
           +  L   ++L        EA   G +      + L     K  R    + I+E M++K L
Sbjct: 506 VDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGL 565

Query: 632 SPQTSTWERVVQELCRPKRIQAAI 655
           +P   TW  ++  L + + I  A+
Sbjct: 566 TPNVYTWNSLLDALVKAEEINEAL 589



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 247/506 (48%), Gaps = 9/506 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F+    +L R+R    +    SF  I    GK   V+EA+ LF  M
Sbjct: 187 AYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM 246

Query: 145 VDEFHCKRTVKSFNSVLNVIIQE-GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
                 K+  +  +S  N+II    L  R  E Y  +   +H ++ PN LT N+++  +C
Sbjct: 247 ------KKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLC 300

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +   ++ A ++F     R C PD  TYC+L+DGL K+ ++DEA  L ++M   G    PV
Sbjct: 301 KARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPV 360

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +  LI     +G      K+   +  +GC P+    NT +  +   G ++K   + + +
Sbjct: 361 VYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDI 420

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            +   +P+  +Y  +I+GL K G+A + + +  +M+++ F ++   Y+ ++ G  K GK 
Sbjct: 421 RSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKV 480

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A ++ ++M EK  +P    Y A++DGL ++ + DEA  +  E  + G   N   YSSL
Sbjct: 481 HKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSL 540

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + GF + G+  +A  I ++M K     N   ++ L+  L +  ++ EA + +  M    C
Sbjct: 541 IDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKC 600

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P+   YS +I+GLC      +A   + +M   +    P+V TY  +++ L K  NI+ +
Sbjct: 601 PPNTYTYSILINGLCRVQKYNKAFVFWQDM--QKQGLVPNVVTYTTMISGLAKVGNITDA 658

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
             L       G  PD  + N  +  +
Sbjct: 659 YSLFERFKANGGIPDAASFNALIEGM 684



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/399 (26%), Positives = 204/399 (51%), Gaps = 4/399 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +EEA ++F +   +  C     ++ S+++ + ++G    A   +  +++A H    
Sbjct: 301 KARKLEEAYKIFES-ASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHN--- 356

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            N + +  +I+     G  ++  ++F+E+  R C+PD+    T MD + K   +++  ++
Sbjct: 357 ANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMI 416

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            ++++  G  P   ++++LI+GL K G+    + +   M  +G   +   YN ++ G C 
Sbjct: 417 FEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCK 476

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G + KA  +L+ M      P   TYG I++GL K+ R  +   +    + +   +N  +
Sbjct: 477 SGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVL 536

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS+LI G  K G+ ++A  + ++MM+KG  PN   +++L+D L +  + +EA      M 
Sbjct: 537 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMK 596

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
              C  N +TYS L+ G     K +KA   W+DM K   V N V Y+ +I GL + G + 
Sbjct: 597 EMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNIT 656

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           +A  ++ +  + G  PD  +++++I G+ NA    EA +
Sbjct: 657 DAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 191/400 (47%), Gaps = 8/400 (2%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LPN    +L    V R   +D+A+     M      P    Y  L+  L +  R + A+ 
Sbjct: 8   LPNQACADLAAALV-RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALE 66

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CL-PNEVTYNTLIHG 306
           LL +MQ  G       F  L+  L + G++  A  LVD   +KG CL P+ V YN  I  
Sbjct: 67  LLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDE--VKGSCLEPDIVLYNVCIDC 124

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
               GN+D A      + A    P++V+Y ++I  L K GR  +   +   ME  +    
Sbjct: 125 FGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPC 184

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            Y Y+T+I G    G+ EDA KL +++ E+GC P+ V +++++  L +  K DEA   LF
Sbjct: 185 AYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALS-LF 243

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E++      N+ TY+ ++      G+  +A  I  +M   +   N +  ++++  LC+  
Sbjct: 244 EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKAR 303

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           KL EA  ++     RGC PD V Y S+I GL   G V+EA +LF +ML     + P V+T
Sbjct: 304 KLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYT 363

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             I    +  +    H +     ++ RGC PDL   N ++
Sbjct: 364 SLIRNFFIHGRKEDGHKV--FKELIRRGCKPDLTLLNTYM 401


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 232/486 (47%), Gaps = 34/486 (6%)

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI------VNAKHMNILPNTL-- 193
           + M+++F  K TV ++N++L+   +EG   +ALE  + +       N    N+L N L  
Sbjct: 203 YGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSK 262

Query: 194 ------------------------TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
                                   T+N +I   C+ GL   A  L  EM  R   P + T
Sbjct: 263 KGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLST 322

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y TLM GLCK  ++    L   +M      P  V+FN L+ G C+ G +  A  L D + 
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            +  +P  +TYNTLIHGLC+ G LD A+ L   M      P+  TY  ++NG  KLG   
Sbjct: 383 CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS 442

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
                   M  +    + + Y+T I G  K      A  + ++M+  G  P+ + Y+  +
Sbjct: 443 MARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFV 502

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
             LC+ G  +EA ++L  M+++G   +  TY+S++ GF ++G   KA E++ +M      
Sbjct: 503 HALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA 562

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + V Y+VLIH       L  A M +++ML +    +V+ Y+++I+GLC    ++EA K 
Sbjct: 563 PSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKY 622

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+EM   E    P+ F+Y IL+N  C       ++ L   M+DR   PD  T ++FL  L
Sbjct: 623 FDEM--EEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680

Query: 590 KEKLEA 595
               + 
Sbjct: 681 HRDYQV 686



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/542 (28%), Positives = 255/542 (47%), Gaps = 48/542 (8%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH-------RALEFYNH----IVNAKH 185
           A+R F  ++ +   K +   F ++L++++   L H       R + F  H    ++ A H
Sbjct: 102 ALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGH 161

Query: 186 M------------NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
           +             +LP+    N +++ +    L+  A  ++  M     +P + TY T+
Sbjct: 162 VXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTM 221

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +D  CKE R+D+A+ LL EMQ  GC+P  VT+NVL+NGL K GEL +A  L++ M   G 
Sbjct: 222 LDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGL 281

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
             +  TYN LI+G C KG   +A  L++ MV  +  P   TY T++ GL K  + V G R
Sbjct: 282 NVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQ-VTGVR 340

Query: 354 VLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           +  S M + KF  +   +++L+ G  + G   +A  L+ ++  +   P  + Y+ LI GL
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G  D A  +  EM + G   + FTY+ L+ G F+ G    A   + +M       + 
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y+  I G  +      A  +  +ML+ G  PDV+ Y+  +H LC  G+ EEA  L   
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M  +     PD  TY  ++N   K  ++  + ++ N M+ +G  P +VT  + + A   K
Sbjct: 521 M--VSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAK 578

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                     + +LA   F +            ML+K +     T+  ++  LC  +R+ 
Sbjct: 579 Q---------MLDLAFMYFSK------------MLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 653 AA 654
            A
Sbjct: 618 EA 619



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 203/441 (46%), Gaps = 13/441 (2%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDF-KSLEMVLYRMRREKR 114
           +G  +  +   +E+ NS   + +Y     T+  LI  +   G F ++ ++V   + R   
Sbjct: 263 KGELEQAKGLIEEMLNSGLNVSAY-----TYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317

Query: 115 VVLEKSFIFIFKAYGKAHLVE-EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA 173
             L      +   YG    V+   +RL  + + +      + SFNS+L    + G    A
Sbjct: 318 PTLSTYNTLM---YGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEA 374

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
              ++ +   K  +++P  +T+N +I  +C  G +D A++L +EM  +   PDI+TY  L
Sbjct: 375 FLLFDEL---KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           ++G  K   +  A    +EM   G  P    +N  I G  K  +   A  + + M   G 
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            P+ +TYN  +H LC +GN ++A  LL+ MV+   +P+ VTY +IING VK G       
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           V   M  +    +   Y+ LI     +   + A   + +M+EK    N + Y+A+I+GLC
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
              + DEA +   EM   G   N F+Y+ L+      G   +A+ ++++M       +  
Sbjct: 612 MTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSF 671

Query: 474 CYSVLIHGLCEDGKLREARMV 494
            +SV +  L  D ++   + V
Sbjct: 672 THSVFLKNLHRDYQVHAVQCV 692


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 235/465 (50%), Gaps = 10/465 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +TF  +I   C+   +D+A+++   M   NC+ D+  Y  L++ L K+ RL EA   
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+EM  +G  P  VT+  +I+G CK G +G A ++   M  +GC PN  TY +LI+GL  
Sbjct: 446 LNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              L KA++L+ +M      P  +TY T+I G  K     +  R+   ME+     +E  
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 565

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ L   L K G+AE+A   +  ++ KG     V Y++L+DG  + G  D A  ++ +M+
Sbjct: 566 YNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           N GC A+ +TYS L++   +  K ++A+ I   M  +    N V Y+++I  + ++GK  
Sbjct: 623 NEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHD 682

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A+ ++ +M+S G KP    Y+  I   C  G +EEA  L  EM        PDV TYNI
Sbjct: 683 HAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEM--ERDGVTPDVVTYNI 740

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            +N       I  +   L  M+D  C+P+   C  +   LK  L+       +++     
Sbjct: 741 FINGCGHMGYIDRAFSTLKRMVDASCEPN---CWTYWLLLKHFLKMSLINAHYVDTSG-- 795

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           ++     +  ++++E M++  L+P   T+  ++   C+  R++ A
Sbjct: 796 MWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEA 840



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/478 (29%), Positives = 229/478 (47%), Gaps = 20/478 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  ++ ++I+ +C    V  A+ L   M    C  +++TY  L+ GLCKE R+ +A  LL
Sbjct: 248 NEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLL 307

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM + G  P+  T+N +I+G CK+G +  A  +   M   GC P++ TYN+LI+GLC  
Sbjct: 308 DEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-G 366

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G LD+A  LL+  +A    P  +T+  +ING  K  R  D  RV  +M      ++   Y
Sbjct: 367 GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAY 426

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             LI+ L K+ + ++A +   +M   G  PN V Y+++IDG C+VG    A E+   M +
Sbjct: 427 GVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEH 486

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC  NA+TY SL+ G  +  K HKA+ +   M ++      + Y+ LI G C+  +   
Sbjct: 487 EGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 546

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++  M   G  PD  AY+ +   LC +G  EEA         +  K      TY  L
Sbjct: 547 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTK-----VTYTSL 601

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAI 608
           ++   K  N   +  L+  M++ GC  DL T ++ L AL  ++KL       D +    +
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661

Query: 609 R------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +            + K  +      +   M+     P  +T+   +   C+  RI+ A
Sbjct: 662 KCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEA 719



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 226/474 (47%), Gaps = 26/474 (5%)

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V  K + + P    +NL ++++ R  + +   +L+  +      PD  TY T++   CK+
Sbjct: 135 VGGKRLVLSPKC--YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKK 192

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             L  A      ++  G      T N L+ G C+  +L +A  L+  M L GC  NE +Y
Sbjct: 193 GSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSY 252

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
             LI GLC    + +A+ L+  MV   C  N  TY  +I GL K GR  D   +L  M  
Sbjct: 253 TILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPL 312

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R    + + Y+ +I G  K G+ +DA+ +   M + GC P+   Y++LI GLC  GK DE
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDE 371

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           AEE+L   I  G      T+++L+ G+ ++ +   A+ +  +M  +NC  +   Y VLI+
Sbjct: 372 AEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLIN 431

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            L +  +L+EA+    +M + G  P+VV Y+S+I G C  G V  AL++F  M       
Sbjct: 432 VLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLM--EHEGC 489

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P+ +TY  L+  L +   +  ++ L+  M + G  P ++T   + T ++ +        
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIT---YTTLIQGQC------- 539

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      K+      F++ E+M Q  L+P    +  +   LC+  R + A
Sbjct: 540 -----------KKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA 582



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 134/523 (25%), Positives = 222/523 (42%), Gaps = 60/523 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I   Y K  +V  A+ +F  M  E  C     ++ S++  +IQ+   H+A+     
Sbjct: 460 TYTSIIDGYCKVGMVGAALEVFKLMEHE-GCHPNAWTYGSLIYGLIQDKKLHKAMAL--- 515

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I   +   I P  +T+  +I+  C+    DNA +LF  M      PD   Y  L D LCK
Sbjct: 516 ITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCK 575

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R +EA   L      G   T VT+  L++G  K G    AA L++ M  +GC  +  T
Sbjct: 576 SGRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYT 632

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+ L+  LC +  L++A+S+LD+M  S    N V Y  II+ ++K G+      +   M 
Sbjct: 633 YSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMI 692

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 +   Y+  IS   K G+ E+A  L  +M   G  P+ V Y+  I+G   +G  D
Sbjct: 693 SSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYID 752

Query: 420 EAEEILFEMINNGCAANAFTY--------------------------------------- 440
            A   L  M++  C  N +TY                                       
Sbjct: 753 RAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERM 812

Query: 441 ------------SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
                       SS++ GF ++ +  +A  +   M   +   NE  Y++LI   C+    
Sbjct: 813 MKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLF 872

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A    T M+  G +P + +Y  +I GLC+ G  + A  LF ++L ++         + 
Sbjct: 873 GKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNE--VAWK 930

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           IL + L K  ++     LL +M +R C  D  + ++   +++E
Sbjct: 931 ILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSMLTDSIRE 973



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 202/461 (43%), Gaps = 59/461 (12%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + +   K H  + A RLF  M+++       +++N + + + + G   RA E Y+ 
Sbjct: 530 TYTTLIQGQCKKHEFDNAFRLFE-MMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSF 585

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V      ++   +T+  ++    + G  D A  L  +M    C+ D+YTY  L+  LCK
Sbjct: 586 LVRK---GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642

Query: 240 ENRLDEAVLLLDEMQVDGCF-----------------------------------PTPVT 264
           + +L+EA+ +LD+M V G                                     P+  T
Sbjct: 643 QKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATT 702

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + V I+  CK G +  A  L+  M   G  P+ VTYN  I+G    G +D+A S L RMV
Sbjct: 703 YTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMV 762

Query: 325 ASKCMPNEVTYGTIINGLVKL----GRAVDGA------------RVLMSMEERKFHVNEY 368
            + C PN  TY  ++   +K+       VD +            ++L  M +   +    
Sbjct: 763 DASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVV 822

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YS++I+G  K  + E+A  L   M+ K   PN  +Y+ LI   C +    +A   + +M
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDM 882

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I  G      +Y  L+ G  + G   +A  ++ D+   +  +NEV + +L  GL + G +
Sbjct: 883 IEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHV 942

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNA-GSVEEALK 528
                +   M +R C+ D  +YS +   +  A GSV   L+
Sbjct: 943 DFCSQLLAAMDNRHCRIDSESYSMLTDSIREASGSVVSELR 983



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 30/311 (9%)

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           AVD  + +  +  ++  ++   Y+  +  L +    E   KL+  ++++G  P+TV Y+ 
Sbjct: 125 AVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNT 184

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I   C+ G    A      +  +G   + +T ++L+ G+  +    KA  +   M    
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  NE  Y++LI GLCE   +REA ++   M+  GC  ++  Y+ +I GLC  G + +A 
Sbjct: 245 CRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDAR 304

Query: 528 KLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            L +EM    P     P V+TYN +++  CK   +  ++ +   M   GC+PD  T N  
Sbjct: 305 GLLDEM----PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSL 360

Query: 586 LTAL-KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
           +  L   KL+   +  + LN    R F                    +P   T+  ++  
Sbjct: 361 IYGLCGGKLD---EAEELLNGAIARGF--------------------TPTVITFTNLING 397

Query: 645 LCRPKRIQAAI 655
            C+ +RI  A+
Sbjct: 398 YCKAERIDDAL 408


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 146/486 (30%), Positives = 232/486 (47%), Gaps = 34/486 (6%)

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI------VNAKHMNILPNTL-- 193
           + M+++F  K TV ++N++L+   +EG   +ALE  + +       N    N+L N L  
Sbjct: 203 YGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSK 262

Query: 194 ------------------------TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
                                   T+N +I   C+ GL   A  L  EM  R   P + T
Sbjct: 263 KGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLST 322

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y TLM GLCK  ++    L   +M      P  V+FN L+ G C+ G +  A  L D + 
Sbjct: 323 YNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELK 382

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            +  +P  +TYNTLIHGLC+ G LD A+ L   M      P+  TY  ++NG  KLG   
Sbjct: 383 CRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVS 442

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
                   M  +    + + Y+T I G  K      A  + ++M+  G  P+ + Y+  +
Sbjct: 443 MARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFV 502

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
             LC+ G  +EA ++L  M+++G   +  TY+S++ GF ++G   KA E++ +M      
Sbjct: 503 HALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVA 562

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + V Y+VLIH       L  A M +++ML +    +V+ Y+++I+GLC    ++EA K 
Sbjct: 563 PSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKY 622

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+EM   E    P+ F+Y IL+N  C       ++ L   M+DR   PD  T ++FL  L
Sbjct: 623 FDEM--EEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNL 680

Query: 590 KEKLEA 595
               + 
Sbjct: 681 HRDYQV 686



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 152/542 (28%), Positives = 251/542 (46%), Gaps = 48/542 (8%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH-------RALEFYNH----IVNAKH 185
           A+R F  ++ +   K +   F ++L++++   L H       R + F  H    ++ A H
Sbjct: 102 ALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGH 161

Query: 186 M------------NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
           +             +LP+    N +++ +    L+  A  ++  M     +P + TY T+
Sbjct: 162 VXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTM 221

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +D  CKE R+D+A+ LL EMQ  GC+P  VT+NVL+NGL K GEL +A  L++ M   G 
Sbjct: 222 LDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGL 281

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
             +  TYN LI+G C KG   +A  L++ MV  +  P   TY T++ GL K  + V G R
Sbjct: 282 NVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQ-VTGVR 340

Query: 354 VLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           +  S M + KF  +   +++L+ G  + G   +A  L+ ++  +   P  + Y+ LI GL
Sbjct: 341 LRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGL 400

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G  D A  +  EM + G   + FTY+ L+ G F+ G    A   + +M       + 
Sbjct: 401 CMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDR 460

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y+  I G  +      A  +  +ML+ G  PDV+ Y+  +H LC  G+ EEA  L   
Sbjct: 461 FAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLEN 520

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M  +     PD  TY  ++N   K  ++  + ++ N M+ +G  P +VT  + + A   K
Sbjct: 521 M--VSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAK 578

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                                Q     F     ML+K +     T+  ++  LC  +R+ 
Sbjct: 579 ---------------------QMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 653 AA 654
            A
Sbjct: 618 EA 619



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 203/441 (46%), Gaps = 13/441 (2%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDF-KSLEMVLYRMRREKR 114
           +G  +  +   +E+ NS   + +Y     T+  LI  +   G F ++ ++V   + R   
Sbjct: 263 KGELEQAKGLIEEMLNSGLNVSAY-----TYNPLINGFCQKGLFVEAFDLVEEMVNRRAF 317

Query: 115 VVLEKSFIFIFKAYGKAHLVE-EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA 173
             L      +   YG    V+   +RL  + + +      + SFNS+L    + G    A
Sbjct: 318 PTLSTYNTLM---YGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEA 374

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
              ++ +   K  +++P  +T+N +I  +C  G +D A++L +EM  +   PDI+TY  L
Sbjct: 375 FLLFDEL---KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           ++G  K   +  A    +EM   G  P    +N  I G  K  +   A  + + M   G 
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            P+ +TYN  +H LC +GN ++A  LL+ MV+   +P+ VTY +IING VK G       
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           V   M  +    +   Y+ LI     +   + A   + +M+EK    N + Y+A+I+GLC
Sbjct: 552 VFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLC 611

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
              + DEA +   EM   G   N F+Y+ L+      G   +A+ ++++M       +  
Sbjct: 612 MTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSF 671

Query: 474 CYSVLIHGLCEDGKLREARMV 494
            +SV +  L  D ++   + V
Sbjct: 672 THSVFLKNLHRDYQVHAVQCV 692


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 165/550 (30%), Positives = 269/550 (48%), Gaps = 23/550 (4%)

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDE---FHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           +FI+         E+ IR    M DE    +   ++ ++N++++   + G    A +   
Sbjct: 211 VFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRE 270

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +   K  ++ PN +TFN ++  +C++  +  A  L +EM V    PD YTY  L DGL 
Sbjct: 271 RM---KEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLL 327

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           + +  + A+ L ++    G      T ++L+NGLCK G++ +A +++      G + +EV
Sbjct: 328 RCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEV 387

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            YNT ++G C  G+++KA+  ++RM +    PN +T+ ++I+    +         +  M
Sbjct: 388 IYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKM 447

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E+    +   Y+TLI G  K    +   ++ +QM E G KPN V Y +LI+ LC+ GK 
Sbjct: 448 AEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKI 507

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            EAE +L +MI  G   NA  Y+ L+ G    GK   A+  + +M ++      V Y+VL
Sbjct: 508 LEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVL 567

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I GLC+ GKL EA    TQ+ S G  PDV+ Y+S+I G  NAG+V + L L+  M  L  
Sbjct: 568 IDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGI 627

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE-----KL 593
           K  P V TY+ L++  C +  I     L N M+     PD V  N  +    E     K 
Sbjct: 628 K--PTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKA 684

Query: 594 EAPQDG-------TDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            +   G        D +  N L +  F+  + S    +V  M  K L+P+  T++ +V+ 
Sbjct: 685 YSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKG 744

Query: 645 LCRPKRIQAA 654
            C  K    A
Sbjct: 745 HCDLKDFSGA 754



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 219/418 (52%), Gaps = 9/418 (2%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
            +EF + +   +   + PN   +N++I  +CR   + +A ++F EM   N    I TY T
Sbjct: 195 GMEFLDSM---RKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNT 251

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+DG CK   LD A  + + M+     P  +TFN L++GLCK  ++  A  L+  M + G
Sbjct: 252 LIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNG 311

Query: 293 CLPNEVTYNTLIHGL--CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            +P+  TY+ L  GL  C  GN   A+ L ++        N  T   ++NGL K G+   
Sbjct: 312 FMPDGYTYSILFDGLLRCDDGN--GAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEK 369

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +L    E     +E IY+T ++G  + G    A+   ++M   G +PN++ +++LID
Sbjct: 370 AEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLID 429

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
             C + + D+AEE + +M   G   +  TY++L+ G+ +     +  +I + M +     
Sbjct: 430 KFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKP 489

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N V Y  LI+ LC+DGK+ EA +V   M+ RG  P+   Y+ +I G C  G V++AL+ F
Sbjct: 490 NVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFF 549

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +EM  +  +  P + TYN+L++ LCK+  ++ + D L  +   G  PD++T N  ++ 
Sbjct: 550 DEM--MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISG 605



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/545 (27%), Positives = 249/545 (45%), Gaps = 46/545 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y   G+  +   +  RM+ +       +F  +     K   ++EA  L   M
Sbjct: 248 TYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEM 307

Query: 145 -VDEFHCKRTVKS--FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            V+ F       S  F+ +L      G    A+E Y     A    I  N  T ++++  
Sbjct: 308 EVNGFMPDGYTYSILFDGLLRCDDGNG----AMELYEQ---ATEKGIRINNYTGSILLNG 360

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+ G V+ A ++ ++        D   Y T ++G C+   +++A+L ++ M+  G  P 
Sbjct: 361 LCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPN 420

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            +TFN LI+  C   E+ +A + V  M  KG  P+  TYNTLI G       D+   +L+
Sbjct: 421 SITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILE 480

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +M      PN V+YG++IN L K G+ ++   VL  M  R    N  +Y+ LI G    G
Sbjct: 481 QMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVG 540

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K +DA++ + +MM     P  V Y+ LIDGLC+ GK  EAE+ L ++ ++G + +  TY+
Sbjct: 541 KVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYN 600

Query: 442 SLMKGFFESG---------------------------------KGHKAVE-IWKDMAKNN 467
           SL+ G+  +G                                 +G + VE ++ +M + N
Sbjct: 601 SLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMN 660

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            + + V Y+ +IH   E G  ++A  +   ML +G  PD + Y+S+I G    G +    
Sbjct: 661 LLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIK 720

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            L N M   E   + D  TY+IL+   C   + S +      M++    P+   CN    
Sbjct: 721 DLVNNMKAKELAPKAD--TYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTA 778

Query: 588 ALKEK 592
            L+++
Sbjct: 779 GLEQE 783



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 209/446 (46%), Gaps = 27/446 (6%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
            + LF E+       D + Y   +    K   L   +  LD M+  G  P    +NVLI 
Sbjct: 160 VVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIG 219

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLC+   +  A K+ D M     + + VTYNTLI G C  G LD A  + +RM      P
Sbjct: 220 GLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAP 279

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N +T+ ++++GL K+ +  +   +L  ME   F  + Y YS L  GL +      AM+L+
Sbjct: 280 NIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELY 339

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           +Q  EKG + N    S L++GLC+ GK ++AEEIL +   NG  A+   Y++ + G+   
Sbjct: 340 EQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRI 399

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G  +KA+   + M       N + ++ LI   C+  ++ +A     +M  +G  P V  Y
Sbjct: 400 GDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETY 459

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++I G     + +   ++  +M   E   +P+V +Y  L+N LCK   I  +  +L  M
Sbjct: 460 NTLIDGYGKLCTFDRCFQILEQM--EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDM 517

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL--AIRLFKRQRTSGGFKIVEVMLQ 628
           + RG  P+    N+ +           DG+  + ++  A+R F              M++
Sbjct: 518 ICRGVLPNAQVYNMLI-----------DGSCMVGKVKDALRFFDE------------MMR 554

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAA 654
             +SP   T+  ++  LC+  ++  A
Sbjct: 555 SEISPTLVTYNVLIDGLCKKGKLTEA 580



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 199/445 (44%), Gaps = 5/445 (1%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           L+      G  +  E +L +      V  E  +      Y +   + +AI     M + F
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERM-ESF 415

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
             +    +FNS+++         +A E+   +       + P+  T+N +I    +L   
Sbjct: 416 GLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEK---GVTPSVETYNTLIDGYGKLCTF 472

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D   Q+  +M     +P++ +Y +L++ LCK+ ++ EA ++L +M   G  P    +N+L
Sbjct: 473 DRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNML 532

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+G C  G++  A +  D M      P  VTYN LI GLC KG L +A   L ++ +S  
Sbjct: 533 IDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGH 592

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+ +TY ++I+G    G       +  +M+          Y  LISG  KEG  E   K
Sbjct: 593 SPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEK 651

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L+ +M++    P+ VVY+A+I     +G   +A  +   M++ G   +  TY+SL+ G F
Sbjct: 652 LYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHF 711

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             GK     ++  +M           Y +L+ G C+      A + + +M+     P+  
Sbjct: 712 REGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNAS 771

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEM 533
             + +  GL   G ++E   + +EM
Sbjct: 772 ICNELTAGLEQEGRLQEVQVICSEM 796


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/542 (27%), Positives = 267/542 (49%), Gaps = 47/542 (8%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           Y+     +YS+++  + +   +    VL  M+R       ++F+ +  +Y +A  + +A+
Sbjct: 206 YRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDAL 265

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           ++  T++     +  +   N+ ++V ++     +AL F   +   + + I+PN +T+N +
Sbjct: 266 KVL-TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM---QVVGIVPNVVTYNCM 321

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL--------------- 243
           I+  C L  V+ AI+L  +MP + C PD  +Y T+M  LCKE R+               
Sbjct: 322 IRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHG 381

Query: 244 ---------------------DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
                                DEA+  L + +  G     V ++ +++ LCK G +  A 
Sbjct: 382 LVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAK 441

Query: 283 KLVDNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            L++ M  KG C P+ VTY  +++G C  G +DKA  LL  M      PN V+Y  ++NG
Sbjct: 442 DLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNG 501

Query: 342 LVKLGRAVDGARVLMSM-EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           L + G++++ AR +M+M EE+ +  N   YS L+ GL KEGK  +A  + ++M+ KG  P
Sbjct: 502 LCRTGKSLE-AREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFP 560

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
             V  + L+  LCR G+  EA + + E +N GCA N   +++++ GF ++ +   A+ + 
Sbjct: 561 GPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVL 620

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
            DM   N   +   Y+ L+  L + G++ EA  +  +ML +G  P  V Y ++IH  C  
Sbjct: 621 DDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQM 680

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
             V++ + +  +M+ L  K +     YN ++  LC    +  +  LL  ++      D  
Sbjct: 681 EKVDDLVAILEKMI-LRQKCKT---IYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAK 736

Query: 581 TC 582
           TC
Sbjct: 737 TC 738



 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 244/482 (50%), Gaps = 42/482 (8%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A++ F+    ++  +     + S+L V+ +  +   A      +V  K   I      F 
Sbjct: 193 ALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRV---LVLMKRRGIYRTPEAFL 249

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            V+ +  R G + +A+++   M     EP++    T +D   + NRL++A+  L+ MQV 
Sbjct: 250 RVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVV 309

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P  VT+N +I G C    +  A +L+D+M  KGCLP++V+Y T++  LC +  + + 
Sbjct: 310 GIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEV 369

Query: 317 VSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
             L+ +M     +  ++VTY T+I+ L K   A +    L   EE+ F +++  YS ++ 
Sbjct: 370 RDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVH 429

Query: 376 GLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            L KEG+  +A  L  +M+ KG C P+ V Y+A+++G CR+G+ D+A+++L  M  +G  
Sbjct: 430 ALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYK 489

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG------------- 481
            N  +Y++L+ G   +GK  +A E+     +     N + YSVL+HG             
Sbjct: 490 PNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDV 549

Query: 482 ----------------------LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
                                 LC DG+  EAR    + L++GC  +VV ++++IHG C 
Sbjct: 550 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 609

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
              ++ AL + ++M  +      DVFTY  L++AL K+  I+ + +L+  M+ +G DP  
Sbjct: 610 NDELDAALSVLDDMYLI--NKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTP 667

Query: 580 VT 581
           VT
Sbjct: 668 VT 669



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 181/373 (48%), Gaps = 12/373 (3%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLF 141
           D   Y+ + H     D     +   +   EK   ++K  +  I  A  K   + EA  L 
Sbjct: 385 DQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLI 444

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN--HIVNAKHMNILPNTLTFNLVI 199
           + M+ + HC   V ++ +V+N   + G   +A +     H    K     PNT+++  ++
Sbjct: 445 NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYK-----PNTVSYTALL 499

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +CR G    A ++      +   P+  TY  LM GL KE +L EA  ++ EM + G F
Sbjct: 500 NGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFF 559

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P PV  N+L+  LC++G    A K ++    KGC  N V + T+IHG C    LD A+S+
Sbjct: 560 PGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSV 619

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           LD M       +  TY T+++ L K GR  +   ++  M  +        Y T+I    +
Sbjct: 620 LDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQ 679

Query: 380 EGKAEDAMKLWKQM-MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
             K +D + + ++M + + CK    +Y+ +I+ LC +GK +EA+++L +++     ++A 
Sbjct: 680 MEKVDDLVAILEKMILRQKCK---TIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAK 736

Query: 439 TYSSLMKGFFESG 451
           T  +LM+G+ + G
Sbjct: 737 TCYALMEGYLKIG 749



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/230 (26%), Positives = 109/230 (47%), Gaps = 7/230 (3%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
            N +L  + ++G  H A +F    +N        N + F  VI   C+   +D A+ +  
Sbjct: 565 INLLLQSLCRDGRTHEARKFMEECLNK---GCAINVVNFTTVIHGFCQNDELDAALSVLD 621

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M + N   D++TY TL+D L K+ R+ EA  L+ +M   G  PTPVT+  +I+  C+  
Sbjct: 622 DMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQME 681

Query: 277 ELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           ++     +++ M L+  C   +  YN +I  LC  G L++A  LL +++ +    +  T 
Sbjct: 682 KVDDLVAILEKMILRQKC---KTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTC 738

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
             ++ G +K+G  +   +V   M  R    +  +   L   L  EG   D
Sbjct: 739 YALMEGYLKIGVPLLAYKVACRMFNRNLIPDVKMCEKLSKRLVVEGAGND 788


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/488 (30%), Positives = 247/488 (50%), Gaps = 24/488 (4%)

Query: 115 VVLEKSFIFIFKAYGKAHL--VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHR 172
           ++L+K+FI         H   V+ A+ LF++++ + +   T   FN +L  +++   YH 
Sbjct: 28  ILLQKNFIPYSSISTTFHSNDVDGAVSLFNSLLHQ-NPTLTAFEFNKILGSLVKSKHYHT 86

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
            L     +   +   I PN +TFN++I   C+LGL+  A  +  ++     EPDI T  T
Sbjct: 87  VLSLSQQM---EFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNT 143

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
            + G C + ++ +A+   D++   G     V++  LINGLCK GE   A +L+  +  K 
Sbjct: 144 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKL 203

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              N V YNT+I G+    +++ A  L   MVA +  P+ VTY  +I G   +G+  D  
Sbjct: 204 VQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAI 263

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M       + Y ++ L+ G  KEG+ + A  +   MM +  KPN   ++ L+DG 
Sbjct: 264 DLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGF 323

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+  K  E + +   M+  G   N  TY SLM G+    + +KA +I+  M++     N 
Sbjct: 324 CKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANV 383

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             Y+++I+G C+  K+ +A  ++ +M  +   PDVV Y+S+I GLC +G +  A +L NE
Sbjct: 384 HSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNE 443

Query: 533 MLCLEPKSQ-PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           M     + Q P++ TYN +LNA            LL  + D+G  P++ T  I +  L +
Sbjct: 444 M---HDRGQPPNIITYNSILNA------------LLTKLKDQGIQPNMHTDTILIKGLCQ 488

Query: 592 --KLEAPQ 597
             KLEA +
Sbjct: 489 SGKLEAAR 496



 Score = 75.9 bits (185), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 98/197 (49%), Gaps = 39/197 (19%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL------YHRALEFY---NHIVNAK 184
           ++  +  F+T+VD F   R +K   +V  +++++G+      Y   ++ Y     +  AK
Sbjct: 309 IKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAK 368

Query: 185 HM-------NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
            +        +  N  ++N++I   C++  VD A++LF EM  ++  PD+ TY +L+DGL
Sbjct: 369 KIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGL 428

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFN-----------------------VLINGLCK 274
           CK  ++  A  L++EM   G  P  +T+N                       +LI GLC+
Sbjct: 429 CKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPNMHTDTILIKGLCQ 488

Query: 275 NGELGRAAKLVDNMFLK 291
           +G+L  A K+ +++ +K
Sbjct: 489 SGKLEAARKVFEDLLVK 505


>gi|296087527|emb|CBI34116.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 149/519 (28%), Positives = 247/519 (47%), Gaps = 63/519 (12%)

Query: 124 IFKAYGKAHLVEEAI-RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
           + KAY +  + +EAI  LF T    F     + S N ++N +I+ G    A+  Y H+  
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGF--VPHIMSCNFLMNRLIEHGKIDMAVAIYRHL-- 218

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            K + + PN  T+ + IK +CR G  + A+ +FREM      P+  T  T ++GLC   R
Sbjct: 219 -KRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKR 277

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            D     L  ++          +  +I G C   +L  A  +  +M  +G  P+   Y  
Sbjct: 278 SDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGA 337

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPN----------------EVTYGTIINGLVKLG 346
           LIH  C  GNL +AV+L + MV++    N                EV Y  +++ L KLG
Sbjct: 338 LIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLG 397

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           +  +   +L  M+ R+  ++   Y+TLI+G   +GK  DA  ++++M E+G +P+ V Y+
Sbjct: 398 KVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYN 457

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFT--------------------------- 439
            L+ G  R G   EA E+L  +   G   N+ T                           
Sbjct: 458 ILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDK 517

Query: 440 ----YSSLMKGFFESGKGHKAVEIWKDMAKNNCVY--------NEVCYSVLIHGLCEDGK 487
               YS+++ G+ ++    KA E++  ++K   +         N++ Y  LI   C DG 
Sbjct: 518 CLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGD 577

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           ++ A++V+  ++ RG  PDV+ Y+ MI+G C    + EA  +FN+M   E   +PDV TY
Sbjct: 578 MKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMK--ERGIKPDVITY 635

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            ++L+   K +N+  +I+L + M+ RG  PD+VT    L
Sbjct: 636 TVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALL 674



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 205/481 (42%), Gaps = 56/481 (11%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
           H ++L   L  ++++K   R+G+ D AI    +   R   P I +   LM+ L +  ++D
Sbjct: 152 HSSVL--ILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKID 209

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            AV +   ++  G  P   T+ + I  LC+ G    A  +   M   G  PN VT +T I
Sbjct: 210 MAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYI 269

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLC     D     L  + A+    +   Y  +I G     +  +   V + M      
Sbjct: 270 EGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIA 329

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN----------------TVVYSAL 408
            + YIY  LI    K G    A+ L   M+  G K N                 V+Y+ +
Sbjct: 330 PDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIV 389

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           +D LC++GK +EA E+L EM     + +   Y++L+ G+   GK   A  ++++M +   
Sbjct: 390 VDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGI 449

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + V Y++L+ G   +G  +EA  +   + ++G KP+   ++ +I GLC AG V+EA  
Sbjct: 450 EPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEA 509

Query: 529 LFN--EMLCLEPKS-----------------------------------QPDVFTYNILL 551
             N  E  CLE  S                                   +P+   Y  L+
Sbjct: 510 FLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLI 569

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
            A C+  ++  +  + + +++RG  PD++T  + +     ++   ++  D  N++  R  
Sbjct: 570 GAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYC-RVNCLREARDIFNDMKERGI 628

Query: 612 K 612
           K
Sbjct: 629 K 629



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 201/445 (45%), Gaps = 49/445 (11%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+    +    DEA+  L + +  G  P  ++ N L+N L ++G++  A  +  ++   G
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN+ TY   I  LC KGN ++AV +   M  +   PN VT  T I GL    R+  G 
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGY 282

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
             L ++    + ++ + Y+ +I G   E K ++A  ++  M+ +G  P+  +Y ALI   
Sbjct: 283 EALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAY 342

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G   +A  +  +M++NG   N                    V+ +K+   +    +E
Sbjct: 343 CKAGNLLQAVALHNDMVSNGIKTN-------------------LVDQFKEFRDSGIFLDE 383

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y++++  LC+ GK+ EA  +  +M  R    DVV Y+++I G C  G + +A  +F E
Sbjct: 384 VLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEE 443

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN--------- 583
           M   E   +PD+ TYNIL+    +      +++LL+ +  +G  P+  T N         
Sbjct: 444 M--KERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMA 501

Query: 584 -------IFLTALKEK----LEAPQDG---TDFLNELAIRLFKRQRTSGGFKIVEVMLQK 629
                   FL  L++K      A  DG    +F  + A  LF R    G  +    ML  
Sbjct: 502 GKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRK-AYELFSRLSKQGILR----MLAL 556

Query: 630 FLSPQTSTWERVVQELCRPKRIQAA 654
            + P    + +++   CR   ++ A
Sbjct: 557 DVEPNQIMYGKLIGAFCRDGDMKRA 581



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 155/307 (50%), Gaps = 12/307 (3%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I  + + +N+V+  +C+LG V+ A++L  EM  R    D+  Y TL+ G C + +L +A 
Sbjct: 379 IFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAK 438

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            + +EM+  G  P  VT+N+L+ G  +NG    A +L+D +  +G  PN  T+N +I GL
Sbjct: 439 NMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGL 498

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV--------LMSME 359
           C+ G + +A + L+ +   KC+ N   Y  +++G  K         +        ++ M 
Sbjct: 499 CMAGKVKEAEAFLNTL-EDKCLEN---YSAMVDGYCKANFTRKAYELFSRLSKQGILRML 554

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 N+ +Y  LI    ++G  + A  ++  ++E+G  P+ + Y+ +I+G CRV    
Sbjct: 555 ALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLR 614

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA +I  +M   G   +  TY+ ++ G  ++     A+ ++ +M       + V Y+ L+
Sbjct: 615 EARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALL 674

Query: 480 HGLCEDG 486
            G C  G
Sbjct: 675 PGKCNFG 681



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 120/494 (24%), Positives = 218/494 (44%), Gaps = 53/494 (10%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           D T+   I+     G+F+    V   M         V   ++I    ++ ++ L  EA+R
Sbjct: 227 DYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALR 286

Query: 140 LFHTM---VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
                   +D F     ++ F S + +   E ++          ++  +  I P+   + 
Sbjct: 287 ALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVF----------IDMVNEGIAPDGYIYG 336

Query: 197 LVIKTVCRLG-----------LVDNAIQL-----FREMPVRNCEPDIYTYCTLMDGLCKE 240
            +I   C+ G           +V N I+      F+E        D   Y  ++D LCK 
Sbjct: 337 ALIHAYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKL 396

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            +++EAV LL+EM+        V +  LI G C  G+L  A  + + M  +G  P+ VTY
Sbjct: 397 GKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTY 456

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N L+ G    G   +A+ LLD +      PN  T+  II GL   G+  +    L ++E+
Sbjct: 457 NILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLED 516

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG--------CKPNTVVYSALIDGL 412
           +        YS ++ G  K      A +L+ ++ ++G         +PN ++Y  LI   
Sbjct: 517 KCLEN----YSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAF 572

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           CR G    A+ +   ++  G   +  TY+ ++ G+       +A +I+ DM +     + 
Sbjct: 573 CRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDV 632

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           + Y+V++ G  +   L++A  ++ +M++RG +PD+V Y++++ G CN GS     + F+ 
Sbjct: 633 ITYTVVLDGHSKTNNLQDAINLYDEMIARGLQPDIVTYTALLPGKCNFGS-----RHFDN 687

Query: 533 MLCLEPK----SQP 542
               EPK    +QP
Sbjct: 688 QWLEEPKLFILAQP 701



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 163/370 (44%), Gaps = 39/370 (10%)

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           + L+      G  D+A+  L +      +P+ ++   ++N L++ G+      +   ++ 
Sbjct: 161 DMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKR 220

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
              + N+Y Y   I  L ++G  E+A+ ++++M E G  PN V  S  I+GLC   + D 
Sbjct: 221 LGLNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDL 280

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
             E L  +       + F Y+++++GF    K  +A +++ DM       +   Y  LIH
Sbjct: 281 GYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIH 340

Query: 481 GLCEDGKLREARMVWTQMLSRGCKP----------------DVVAYSSMIHGLCNAGSVE 524
             C+ G L +A  +   M+S G K                 D V Y+ ++  LC  G VE
Sbjct: 341 AYCKAGNLLQAVALHNDMVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVE 400

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA++L NEM     +   DV  Y  L+   C Q  +  + ++   M +RG +PD+VT NI
Sbjct: 401 EAVELLNEMKG--RRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNI 458

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            +              + L + A+ L     T G            L P ++T  R+++ 
Sbjct: 459 LVGGFSR---------NGLKKEALELLDCIGTQG------------LKPNSATHNRIIEG 497

Query: 645 LCRPKRIQAA 654
           LC   +++ A
Sbjct: 498 LCMAGKVKEA 507



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 23/210 (10%)

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A   + Q+ E G + N   Y+ALI  LCR     + + +L E++ +  +   F  ++L  
Sbjct: 80  AWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDITALFD 139

Query: 446 GF----FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
                  E    H +V I             +   +L+      G   EA     Q   R
Sbjct: 140 VLREGGGEVEGEHSSVLI-------------LVLDMLVKAYVRVGMFDEAIDALFQTKRR 186

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCLEPKSQPDVFTYNILLNALCKQSN 559
           G  P +++ + +++ L   G ++ A+ ++  +  L L P      +TY I + ALC++ N
Sbjct: 187 GFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPND----YTYGIFIKALCRKGN 242

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              ++D+   M + G +P+ VTC+ ++  L
Sbjct: 243 FEEAVDVFREMEEAGVNPNAVTCSTYIEGL 272


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 162/593 (27%), Positives = 280/593 (47%), Gaps = 101/593 (17%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS-FIFIFKAYGKAHLVEEAIRLFHT 143
           T+  L++ Y N  + +  E V+  +R+ K++V++++ F  +   Y +   +E+A RL + 
Sbjct: 315 TYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNE 374

Query: 144 MVDE--------------FHCK--RTVK------------------SFNSVLNVIIQEGL 169
           MVD                +CK  R V+                  S+NS+++   ++GL
Sbjct: 375 MVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGL 434

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
            ++A E YN ++          TLT+N ++K  C LG +D+A++L+  M  +   P+  +
Sbjct: 435 MNKAFETYNTMLRN---GFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEIS 491

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
             TL+DG  K  + ++A+ L  E    G      TFN +INGLCK   +  A +LVD M 
Sbjct: 492 CSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMK 551

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR--------------------------- 322
              C P+ +TY TL  G C  G++D+A  +L+                            
Sbjct: 552 QWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHG 611

Query: 323 --------MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
                   M      PN V YG +I G  K G       + + M E+    N +I S+L+
Sbjct: 612 KVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLV 671

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNT--------------------------VVYSAL 408
           S  +++GK ++A  + + ++     P+                           ++++ +
Sbjct: 672 SCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIV 731

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I GLC++G+ ++A+ +L ++ + G  A+ FTYSSL+ G   SG    A ++   M     
Sbjct: 732 IFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGL 791

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N V Y+ LI+GLC+ G+L  A  ++ ++ ++G  P+ + Y+++I   C  G + EA K
Sbjct: 792 TPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFK 851

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           L   M+  E    P VFTY+IL+N LC Q  +  +I LL+ M++   DP+ VT
Sbjct: 852 LKQRMI--EEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVT 902



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/579 (24%), Positives = 266/579 (45%), Gaps = 49/579 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  + +A   A  ++ A+++F  M     C+ +++S NS+LN + Q G     +  +  
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEM-RTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQ 233

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  A     LP+  T  ++ K  C++  V +A++   EM     E ++  Y  +M+G C+
Sbjct: 234 MQRA---GALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCE 290

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL-KGCLPNEV 298
             + ++A  +LD +   G  P  VT+ +L+ G C    +  A  +V  +   K  + +E 
Sbjct: 291 VGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEA 350

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            +  +I+G C  G ++ A  LL+ MV S+   N   Y  +ING  KLGR V+   +L  M
Sbjct: 351 VFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
                  + Y Y++L+ G  K+G    A + +  M+  G    T+ Y+AL+ G C +G  
Sbjct: 411 TGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSI 470

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A  + F M+  G A N  + S+L+ GFF+SGK  KA+ +WK+        N   ++ +
Sbjct: 471 DDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTV 530

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCL 536
           I+GLC+  ++ EA  +  +M    C PD++ Y ++  G C  G ++ A ++ NE+  L  
Sbjct: 531 INGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGF 590

Query: 537 EPKSQ-------------------------------PDVFTYNILLNALCKQSNISHSID 565
            P  +                               P+   Y  L+   CK+ ++  + +
Sbjct: 591 APTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYN 650

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD--------GTDFLNELAIRLFKRQRTS 617
           L   M+++G  P+L  C+  ++    K +  +         GTD + +++    +  + +
Sbjct: 651 LYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVA 710

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                ++ +           W  V+  LC+  RI+ A N
Sbjct: 711 ---NFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKN 746



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 231/506 (45%), Gaps = 32/506 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++ SL+  Y   G           M R        ++  + K +     +++A+RL+  M
Sbjct: 421 SYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLM 480

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +      + S +++L+   + G   +AL  +   +      +  NT TFN VI  +C+
Sbjct: 481 LKKGIAPNEI-SCSTLLDGFFKSGKTEKALNLWKETL---ARGLAKNTTTFNTVINGLCK 536

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +  +  A +L  +M    C PDI TY TL  G CK   +D A  +L+E++  G  PT   
Sbjct: 537 IERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEF 596

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI G     + G+   ++  M  +G  PN V Y  LI G C +G+L  A +L   M+
Sbjct: 597 FNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMI 656

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-------------------------- 358
               +PN     ++++   + G+  +   VL ++                          
Sbjct: 657 EKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTV 716

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
                H  + +++ +I GL K G+ EDA  L   + +KG   +   YS+LI G    G  
Sbjct: 717 AGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFV 776

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D A ++   M++ G   N  TY+SL+ G  +SG+  +AV ++K +       N + Y+ L
Sbjct: 777 DVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTL 836

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I   C+DG + EA  +  +M+  G  P V  YS +I+GLC  G +EEA+KL ++M  +E 
Sbjct: 837 IDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQM--IEN 894

Query: 539 KSQPDVFTYNILLNALCKQSNISHSI 564
              P+  TY  L+    +  ++   I
Sbjct: 895 NVDPNYVTYWTLIQGYVRCESVDVPI 920



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 150/638 (23%), Positives = 283/638 (44%), Gaps = 53/638 (8%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           ++F+    LG  +L   +  S++   A +GD  +   V  +M+R   +  + +   + KA
Sbjct: 194 QVFDEMRTLGC-RLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKA 252

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y K   V  A+     M  +   +  + ++++V+N   + G  + A    + +       
Sbjct: 253 YCKVKGVVHALEFVEEMT-KMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPG---RG 308

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENRLDEA 246
             PN +T+ L++K  C    ++ A  + +E+   +    D   +  +++G C+  R+++A
Sbjct: 309 FSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDA 368

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             LL+EM           +N++ING CK G +  A  ++  M   G  P+  +YN+L+ G
Sbjct: 369 ARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDG 428

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C KG ++KA    + M+ +      +TY  ++ G   LG   D  R+   M ++    N
Sbjct: 429 YCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPN 488

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
           E   STL+ G FK GK E A+ LWK+ + +G   NT  ++ +I+GLC++ +  EAEE++ 
Sbjct: 489 EISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVD 548

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +M    C  +  TY +L  G+ + G   +A  I  ++           ++ LI G     
Sbjct: 549 KMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAK 608

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           +  +   +  +M +RG  P+ VAY ++I G C  G +  A  L+ EM  +E    P++F 
Sbjct: 609 QHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEM--IEKGLVPNLFI 666

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDL--------------------------V 580
            + L++   ++     +  +L +++     PD+                          +
Sbjct: 667 CSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKI 726

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR-----------TSG----GFKIVEV 625
             NI +  L  KL   +D  + L +L  + F                SG     F + + 
Sbjct: 727 MWNIVIFGLC-KLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDT 785

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAIN---KCWS 660
           ML   L+P   T+  ++  LC+   +  A++   K W+
Sbjct: 786 MLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWT 823



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/464 (23%), Positives = 205/464 (44%), Gaps = 43/464 (9%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE-----AVLLLDEMQVDGCFP-- 260
            D A+ LFR  P     P +  +  L+  L +  R  +     A LL         FP  
Sbjct: 106 ADAAVHLFRLAPF---PPSLLAHAQLLHILVRARRSADARAILASLLSARPPAPPLFPHL 162

Query: 261 ---------TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
                    +  +F++L+  L   G+L  A ++ D M   GC  +  + N++++ L   G
Sbjct: 163 VEVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTG 222

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           +L   V++ ++M  +  +P++ T   +     K+   V     +  M +    VN   Y 
Sbjct: 223 DLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYH 282

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-IN 430
            +++G  + G+  DA ++   +  +G  PN V Y+ L+ G C     +EAE ++ E+  N
Sbjct: 283 AVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKN 342

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
                +   + +++ G+ + G+   A  +  +M  +    N   Y+++I+G C+ G++ E
Sbjct: 343 KQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVE 402

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +M   G +PD  +Y+S++ G C  G + +A + +N M  L         TYN L
Sbjct: 403 AHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTM--LRNGFAATTLTYNAL 460

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           L   C   +I  ++ L   M+ +G  P+ ++C+  L           DG           
Sbjct: 461 LKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLL-----------DG----------F 499

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           FK  +T     + +  L + L+  T+T+  V+  LC+ +R+  A
Sbjct: 500 FKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEA 543



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 91/167 (54%), Gaps = 3/167 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +++S+++     G    A +  + +++   + + PN +T+N +I  +C+ G +  A+ LF
Sbjct: 762 TYSSLIHGCSASGFVDVAFDLRDTMLS---VGLTPNIVTYNSLIYGLCKSGELSRAVSLF 818

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           +++  +   P+  TY TL+D  CK+  + EA  L   M  +G  PT  T+++LINGLC  
Sbjct: 819 KKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQ 878

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           G +  A KL+D M      PN VTY TLI G     ++D  +  LD+
Sbjct: 879 GYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925



 Score = 47.0 bits (110), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 3/100 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++++   ++G    A +    ++      I P   T++++I  +C  G ++ AI+L 
Sbjct: 832 TYNTLIDKHCKDGYITEAFKLKQRMIEE---GIHPTVFTYSILINGLCTQGYMEEAIKLL 888

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
            +M   N +P+  TY TL+ G  +   +D  ++ LD+  +
Sbjct: 889 DQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQSTI 928


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/514 (28%), Positives = 246/514 (47%), Gaps = 25/514 (4%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++A+ +    + E   +    S+++VL  + ++    RAL+   H +  K     PN ++
Sbjct: 171 DDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLL-HTMVKKSGGCSPNVVS 229

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N VI    R G V  A  LF EM  +   PD+ TY + +D LCK   +D+A L+L +M 
Sbjct: 230 YNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMI 289

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +G  P  VT+N +I+G    G+    A +   M  +G +P+  T N+ +  LC  G   
Sbjct: 290 SNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSK 349

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A    D M A    P+ VTY  +++G    G  VD   +  SME      +  +Y+ LI
Sbjct: 350 EAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILI 409

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
               K G  ++AM ++ QM E+G  P+   Y  +I    R+G+  +A +   +MI  G  
Sbjct: 410 DAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLK 469

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY-NEVCYSVLIHGLCEDGKLREARM 493
            +   Y+SL++GF   G   KA E+  +M        N V ++ +I+ LC++G++ EA+ 
Sbjct: 470 PDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQD 529

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  ++  G +PDV+ ++S+I G    G +E+A  + + M+ +    +PDV TY+ LL+ 
Sbjct: 530 IFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISV--GIEPDVVTYSALLDG 587

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
            C+   I   + L   M+ +G  P  +T  I L                       LF  
Sbjct: 588 YCRNGRIDDGLILFREMLSKGVKPTTITYGIILHG---------------------LFND 626

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            RT G  K+   M++   +   ST   ++  LCR
Sbjct: 627 GRTVGAKKMCHEMIESGTTMDISTCGIILGGLCR 660



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/468 (26%), Positives = 235/468 (50%), Gaps = 25/468 (5%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQ-LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           + +  N+++K +C     D+A+  L   MP    EPD  +Y T++  LC+++R   A+ L
Sbjct: 153 DVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDL 212

Query: 250 LDEM--QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           L  M  +  GC P  V++N +I+G  + GE+ +A  L   M  +G +P+ VTY++ I  L
Sbjct: 213 LHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDAL 272

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C    +DKA  +L +M+++   P++VTY  +I+G   LG+  + A +   M  R    + 
Sbjct: 273 CKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDI 332

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           +  ++ +S L K GK+++A + +  M  KG KP+ V YS L+ G    G   +   +   
Sbjct: 333 FTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNS 392

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M  NG  A+   Y+ L+  + + G   +A+ I+  M +   + +   Y  +I      G+
Sbjct: 393 MEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGR 452

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           L +A   + QM++ G KPD + Y+S+I G C  G++ +A +L +EM+      +P+   +
Sbjct: 453 LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMS-RGIPRPNTVFF 511

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           N ++N+LCK+  +  + D+ + ++  G  PD++T N  +           DG   + ++ 
Sbjct: 512 NSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLI-----------DGYGLVGKM- 559

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                       F +++ M+   + P   T+  ++   CR  RI   +
Sbjct: 560 ---------EKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGL 598



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 245/512 (47%), Gaps = 13/512 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  +I  Y+  G +K    +   M R      +    S++     +GK+   +EA   F
Sbjct: 299 TYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKS---KEAAEFF 355

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            +M  + H K  + +++ +L+    EG     L  +N +   +   I+ +   +N++I  
Sbjct: 356 DSMAAKGH-KPDLVTYSVLLHGYAAEGYVVDMLNLFNSM---EGNGIVADHSVYNILIDA 411

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G++D A+ +F +M  R   PD +TY T++    +  RL +A+   ++M   G  P 
Sbjct: 412 YGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPD 471

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-LPNEVTYNTLIHGLCLKGNLDKAVSLL 320
            + +N LI G C +G L +A +L+  M  +G   PN V +N++I+ LC +G + +A  + 
Sbjct: 472 TIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIF 531

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D ++     P+ +T+ ++I+G   +G+      VL +M       +   YS L+ G  + 
Sbjct: 532 DLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRN 591

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ +D + L+++M+ KG KP T+ Y  ++ GL   G+   A+++  EMI +G   +  T 
Sbjct: 592 GRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTC 651

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
             ++ G   +    +A+ ++K +   N  +N    + +I  + +  K  EA  ++  + +
Sbjct: 652 GIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISA 711

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  P+   Y  MI  L   GSVEEA  +F+  L  +    P     N ++  L ++  I
Sbjct: 712 TGLVPNASTYGVMITNLLKEGSVEEADNMFS--LMEKSGCAPSSRLLNNIIRVLLEKGEI 769

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           S + + L+ +  +    +  T ++ L+    K
Sbjct: 770 SKAGNYLSKVDGKTISLEASTASLMLSLFSRK 801



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 194/416 (46%), Gaps = 24/416 (5%)

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            PT  T+N+L++  C+         L       G   + +  N L+  LC     D AV+
Sbjct: 116 LPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVN 175

Query: 319 -LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI--YSTLIS 375
            LL RM      P+ ++Y T++  L +  R+     +L +M ++    +  +  Y+T+I 
Sbjct: 176 VLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIH 235

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G F+EG+   A  L+ +MM++G  P+ V YS+ ID LC+    D+AE +L +MI+NG   
Sbjct: 236 GFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEP 295

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  TY+ ++ G+   G+  +   ++++M +   + +    +  +  LC+ GK +EA   +
Sbjct: 296 DKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFF 355

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNAL 554
             M ++G KPD+V YS ++HG    G V + L LFN M   E      D   YNIL++A 
Sbjct: 356 DSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM---EGNGIVADHSVYNILIDAY 412

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
            K+  +  ++ +   M +RG  PD  T    + A   ++    D  D  N++     K  
Sbjct: 413 GKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAF-SRMGRLADAMDKFNQMIAMGLKPD 471

Query: 615 RTS-----GGF-----------KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    GF            I E+M +    P T  +  ++  LC+  R+  A
Sbjct: 472 TIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEA 527



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 216/468 (46%), Gaps = 8/468 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQH-YANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK 126
           E F+S    G     D   YS++ H YA  G    +  +   M     V     +  +  
Sbjct: 353 EFFDSMAAKGHKP--DLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILID 410

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           AYGK  +++EA+ +F T + E        ++ +V+    + G    A++ +N ++    M
Sbjct: 411 AYGKRGMMDEAMLIF-TQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMI---AM 466

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDE 245
            + P+T+ +N +I+  C  G +  A +L  EM  R    P+   + ++++ LCKE R+ E
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVE 526

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  + D +   G  P  +TFN LI+G    G++ +A  ++D M   G  P+ VTY+ L+ 
Sbjct: 527 AQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLD 586

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C  G +D  + L   M++    P  +TYG I++GL   GR V   ++   M E    +
Sbjct: 587 GYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +      ++ GL +    ++A+ L+K++     K N  + + +ID + +V K +EA E+ 
Sbjct: 647 DISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELF 706

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             +   G   NA TY  ++    + G   +A  ++  M K+ C  +    + +I  L E 
Sbjct: 707 DSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNNIIRVLLEK 766

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           G++ +A    +++  +    +    S M+      G   E +K    M
Sbjct: 767 GEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAM 814



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/199 (21%), Positives = 88/199 (44%), Gaps = 25/199 (12%)

Query: 459 IWKDMAKNNCVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           I ++ A+       VC Y++L+   C   +      ++ + L  G K DV+  + ++  L
Sbjct: 105 ICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCL 164

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR--GC 575
           C+A   ++A+ +    +  E   +PD  +Y+ +L +LC+ S    ++DLL++M+ +  GC
Sbjct: 165 CHAKRSDDAVNVLLHRMP-ELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGC 223

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            P++V+ N  +                        F+    S    +   M+Q+ + P  
Sbjct: 224 SPNVVSYNTVIHGF---------------------FREGEVSKACNLFHEMMQQGVVPDV 262

Query: 636 STWERVVQELCRPKRIQAA 654
            T+   +  LC+ + +  A
Sbjct: 263 VTYSSYIDALCKARAMDKA 281


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 155/524 (29%), Positives = 240/524 (45%), Gaps = 58/524 (11%)

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK-RTVKSFNSVLNVIIQEGLYHR--- 172
           LE   I   +A   +  +++A++LF  ++   H +  +V +FN +LN + +         
Sbjct: 13  LELERIIAARARSGSLGLDDALKLFDELL--IHARPASVVAFNQILNAVSRASRASGRRS 70

Query: 173 --------ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF--------- 215
                    +  +N +V    + + PNT T++++I  +CR+G + ++   F         
Sbjct: 71  SSTSESELVVSLFNRMVRECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWR 130

Query: 216 ---------------------------REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
                                      + MP   C PD  +Y  L+ G C ENR +EA+ 
Sbjct: 131 VNDIVINQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALE 190

Query: 249 LLDEMQVD---GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           LL  M  D    C P  VT+  +I+GLCK     RA  +   M   G  PN  TYN LIH
Sbjct: 191 LLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIH 250

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G    G   + V +L++M A    P+  TYG+++N L  L         L  M E     
Sbjct: 251 GYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEM---HSFLDLMVENGLSP 307

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + +I++   S   K G  + AM ++ +M + G  PN V Y ALID LC++G+ D+AE   
Sbjct: 308 DHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKF 367

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            +MIN G   N   ++SL+ G     K  +A E+  +M       N V ++ LI  LC  
Sbjct: 368 NQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNV 427

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G++ E R +   M   G +PD  +Y+ +I G C AG  +EA K+F+ M+ +     P   
Sbjct: 428 GRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSI--GLSPTEV 485

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           TYN LL+  C  S I  +  L   M+ +G  P +VT N  L  L
Sbjct: 486 TYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 529



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 236/491 (48%), Gaps = 9/491 (1%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
           F +  ++L    R   +V+ +    + K       V EA+ +    + E  C     S++
Sbjct: 118 FATFGLILKTGWRVNDIVINQ----LLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYS 173

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
            +L     E     ALE    + N    +  PN +T+  VI  +C+  L D A  +F++M
Sbjct: 174 ILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQM 233

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                +P+  TY  L+ G     +  E V +L++M   G  P   T+  L+N LC   E+
Sbjct: 234 IDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEM 293

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
                 +D M   G  P+   +N         G +DKA+ + ++M      PN V YG +
Sbjct: 294 ---HSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGAL 350

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+ L KLGR  D       M       N  ++++L+ GL    K E A +L  +M+++G 
Sbjct: 351 IDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGI 410

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            PN V ++ LI  LC VG+  E   ++  M + G   +AF+Y+ L+ G+  +G+  +A +
Sbjct: 411 CPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEK 470

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++  M        EV Y+ L+HG C   ++ +A  ++ +ML +G  P VV Y++++HGL 
Sbjct: 471 VFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLF 530

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
                 EA +L+  M  +   ++ D++TYNI+LN LCK + +  +  +  S+  +G   +
Sbjct: 531 QTKRFSEAKELYLNM--INSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 588

Query: 579 LVTCNIFLTAL 589
           ++T  I + AL
Sbjct: 589 IITFTIMIGAL 599



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 140/562 (24%), Positives = 265/562 (47%), Gaps = 28/562 (4%)

Query: 100 KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF--HCKRTVKSF 157
           ++++++L RM          S+  + K +   +  EEA+ L   M ++    C   V ++
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
            +V++ + +  L+ RA   +  +++     + PN  T+N +I     +G     +Q+  +
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDN---GVKPNNDTYNCLIHGYLSIGKWKEVVQMLEK 267

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M  R  +PD YTY +L++ LC    L E    LD M  +G  P    FN+  +   K G 
Sbjct: 268 MSARGLKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGM 324

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           + +A  + + M   G  PN V Y  LI  LC  G +D A    ++M+     PN V + +
Sbjct: 325 IDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNS 384

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           ++ GL  + +      ++  M ++    N   ++TLI  L   G+  +  +L   M   G
Sbjct: 385 LVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVG 444

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            +P+   Y+ LI G C  G+ DEAE++   M++ G +    TY++L+ G+  + +   A 
Sbjct: 445 VRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAY 504

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            ++++M +       V Y+ ++HGL +  +  EA+ ++  M++ G K D+  Y+ +++GL
Sbjct: 505 CLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGL 564

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C +  V+EA K+F + LC     Q ++ T+ I++ AL K      ++DL  ++   G  P
Sbjct: 565 CKSNCVDEAFKMF-QSLC-SKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP 622

Query: 578 DLVTCNI----------------FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFK 621
           ++VT  +                  +A+++   AP   +  LN L  RL  R   S    
Sbjct: 623 NVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPN--SQMLNALVRRLLHRGDISRAGA 680

Query: 622 IVEVMLQKFLSPQTSTWERVVQ 643
            +  + ++  S + ST   ++ 
Sbjct: 681 YLSKLDERNFSVEASTTSLLIS 702



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 151/345 (43%), Gaps = 8/345 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E A  L + M+D+  C   V  FN+++  +   G   R +E    I   +H+ + P+  +
Sbjct: 396 ERAEELVYEMLDQGICPNAV-FFNTLICNLCNVG---RVMEGRRLIDLMEHVGVRPDAFS 451

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +  +I   C  G  D A ++F  M      P   TY TL+ G C  +R+D+A  L  EM 
Sbjct: 452 YTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREML 511

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  VT+N +++GL +      A +L  NM   G   +  TYN +++GLC    +D
Sbjct: 512 RKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVD 571

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A  +   + +     N +T+  +I  L+K GR  D   +  ++       N   Y  + 
Sbjct: 572 EAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVA 631

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L +EG  E+   L+  M + G  PN+ + +AL+  L   G    A   L ++     +
Sbjct: 632 ENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFS 691

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
             A T S L+  F      H A    K + +     NE   S LI
Sbjct: 692 VEASTTSLLISIFTSDEYQHHA----KSLPEKYHFLNEANSSALI 732



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 18/193 (9%)

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N   YS+LI  LC  G+L+ +   +  +L  G + + +  + ++ GLC+   V EA+ + 
Sbjct: 97  NTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDVL 156

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD---RGCDPDLVTCNIFLT 587
            + +  E    PD  +Y+ILL   C ++    +++LL  M +   R C P++VT    + 
Sbjct: 157 LQRM-PELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215

Query: 588 AL-KEKL---------EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF----LSP 633
            L K +L         +   +G    N+    L     + G +K V  ML+K     L P
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275

Query: 634 QTSTWERVVQELC 646
              T+  ++  LC
Sbjct: 276 DCYTYGSLLNYLC 288


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 239/476 (50%), Gaps = 16/476 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P T  F+ ++  + R+G    AI LF ++  +   P I T+  L++    ++    A  L
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  +   G  P  VTFN +ING C NG + +A     N+  +G L ++ TY TLI+GL  
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +  A+ LL  M  S   PN V Y  +I+GL K G   D   +   + ER   ++   
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++LI G    G+ ++  +L  +M+ +   P+   ++ LID LC+ G+  EA+ +L  M 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  TY++LM+G+      H+A E++  M K     + + Y+VLI G C+   + 
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA +++ ++ ++   P + +Y+S+I GLCN+G +    KL +EM        PDV TYNI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM--HGSAQPPDVVTYNI 410

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQD--------- 598
           L++ALCK+  I  ++ +L  MM +G  P++VT N  +    L+  +   +D         
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 599 -GTDFLN-ELAIRLF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
              D LN  + I  + K +       + + M  K L P  +++  ++  LC   RI
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 264/551 (47%), Gaps = 59/551 (10%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           AI LF T +       ++ +F  ++N    +     A      I+ + +    PN +TFN
Sbjct: 74  AISLF-TQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQ---PNLVTFN 129

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I   C  G++  A+   + +  +    D +TY TL++GL K  ++  A+ LL EM+  
Sbjct: 130 TIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKS 189

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P  V ++ LI+GLCK+G +  A  L   +  +G L + VTYN+LI G C  G   + 
Sbjct: 190 SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEV 249

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             LL +MV     P++ T+  +I+ L K GR ++   VL  M +R    +   Y+ L+ G
Sbjct: 250 TQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEG 309

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
                   +A +L+ +M+++G +P+ + Y+ LIDG C+    DEA  +  E+ N      
Sbjct: 310 YCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT 369

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             +Y+SL+ G   SG+     ++  +M  +    + V Y++LI  LC++G++ EA  V  
Sbjct: 370 IASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLV 429

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEP-------------KSQ 541
            M+ +G KP++V Y++M+ G C   +V  A  +FN M+   LEP             K++
Sbjct: 430 MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTE 489

Query: 542 ------------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
                             PD+ +YN L++ LC    I H  +LL+ M D G  PD++T N
Sbjct: 490 MVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           I L A  +    P D        AI LF+        +IVE +      P   T   +V 
Sbjct: 550 ILLDAFCKT--QPFDK-------AISLFR--------QIVEGIW-----PDFYTNHAIVD 587

Query: 644 ELCRPKRIQAA 654
            LC+ ++++ A
Sbjct: 588 NLCKGEKLKMA 598



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 157/595 (26%), Positives = 282/595 (47%), Gaps = 40/595 (6%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSG-DFKSLEMVLYRMRREKRVVLE 118
           +S   F+  +  +  K G YQ    TF ++I  +  +G  FK+L+          + +L 
Sbjct: 103 QSHTAFAFSLLATILKSG-YQPNLVTFNTIINGFCINGMIFKALDFC--------QNLLA 153

Query: 119 KSFIFIFKAYG-------KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
           + ++F    YG       K   ++ A+ L   M ++   +  +  ++++++ + ++G   
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM-EKSSVQPNLVMYSALIDGLCKDGFVS 212

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            AL   + I       IL + +T+N +I   C +G      QL  +M   N +PD YT+ 
Sbjct: 213 DALGLCSQI---GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L+D LCKE R+ EA  +L  M   G  P  VT+N L+ G C    +  A +L + M  +
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+ + YN LI G C    +D+A+ L   +     +P   +Y ++I+GL   GR    
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            ++L  M       +   Y+ LI  L KEG+  +A+ +   MM+KG KPN V Y+A++DG
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C     + A++I   M+ +G   +   Y+ L+ G+ ++    +A+ ++K+M   N + +
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y+ LI GLC  G++   + +  +M   G  PDV+ Y+ ++   C     ++A+ LF 
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
           +++       PD +T + +++ LCK   +  + D L  ++  GC P++ T  I + AL  
Sbjct: 570 QIV---EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626

Query: 590 -------------KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
                         E  + P D   F   + + L +R  T    K+ E M+ + L
Sbjct: 627 DGSFGEAMLLLSKMEDNDRPPDAITFEIIIGV-LLQRNETDKAEKLREEMIARGL 680



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 176/375 (46%), Gaps = 19/375 (5%)

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           H  C   N+D AV+  +RMV     P    +  ++  +V++G       +   ++ +   
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   ++ LI+  F +     A  L   +++ G +PN V ++ +I+G C  G   +A + 
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              ++  G   + FTY +L+ G  ++G+   A+ + ++M K++   N V YS LI GLC+
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           DG + +A  + +Q+  RG   D V Y+S+I G C+ G  +E  +L  +M  +     PD 
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM--VRENVDPDD 265

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
           +T+NIL++ALCK+  I  +  +L  M  RG  PD+VT N  +     + E   +  +  N
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR-ENVHEARELFN 324

Query: 605 ELAIRLF---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
            +  R                 K +       + + +  K L P  +++  ++  LC   
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 650 RIQAAINKCWSNLYG 664
           RI + + K    ++G
Sbjct: 385 RI-SHVKKLLDEMHG 398



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 94/212 (44%), Gaps = 38/212 (17%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y K  +V+EAI LF  M  + +    + S+NS+++ +   G      E  + + ++
Sbjct: 481 LINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDS 539

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP------------------------ 219
                 P+ +T+N+++   C+    D AI LFR++                         
Sbjct: 540 GQS---PDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLK 596

Query: 220 ----------VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
                     +  C P++ TY  L++ LCK+    EA+LLL +M+ +   P  +TF ++I
Sbjct: 597 MAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIII 656

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
             L +  E  +A KL + M  +G +  E + N
Sbjct: 657 GVLLQRNETDKAEKLREEMIARGLVNIEKSLN 688


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/560 (28%), Positives = 263/560 (46%), Gaps = 44/560 (7%)

Query: 67  DEIFNSTPKLGSYQLGDSTFY--SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           +E F+   KLG   +  + F   +LI     +  F   + +   M        E ++  +
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             A  K  ++E+A+ LF  M D+   K TV  +NS++N   ++G   RA    + +V   
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDK-GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE- 437

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              + P   +++ +I  +CR G + +A++L REM  R    + YT+  L++G CK+ ++D
Sbjct: 438 --GLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L D+M      P  VTFNV+I G C  G + +A +L D M   G  P+  TY +LI
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR-----------AVDGAR 353
            GLCL   + KA   +  +  S  + N  +   ++ GL + GR           AV G +
Sbjct: 556 SGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVK 615

Query: 354 V------------------------LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           +                           M+E+    ++  Y+ +I  L KE     A+  
Sbjct: 616 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 675

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           W QM+  G  PNTV ++ LI+ LC+ G    AE +  EM+      N FTY+  +  F  
Sbjct: 676 WDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT 735

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G   KA ++   M + +   + V +++LI GLC+ GK++EA  +  ++   G  PD ++
Sbjct: 736 EGDMEKAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCIS 794

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           YS++IH LC  G + +A +L+NEML    K  PDV  YNI +           ++ +  +
Sbjct: 795 YSTIIHELCKMGDINKAFELWNEMLYKGLK--PDVVAYNIFIRWCNVHGESDKALGIYTN 852

Query: 570 MMDRGCDPDLVTCNIFLTAL 589
           M+  G  P+  T    L+ +
Sbjct: 853 MIRSGVQPNWDTYRALLSGI 872



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 235/490 (47%), Gaps = 16/490 (3%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + ++PN   +N +I  +C+    D+A +LF+EM  R  EP+  TY  L+  LCK   +++
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ L D+M+  G   T   +N LING CK G L RA  L+  M  +G  P   +Y+ LI 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  G+L  A+ L   M       N  T+  +ING  K  +  + AR+   M +     
Sbjct: 452 GLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           NE  ++ +I G    G    A +L+ QM+E G KP+   Y +LI GLC      +A E +
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            ++ N+    N F+ ++L+ G F  G+  +   +W +MA      + V ++++++   + 
Sbjct: 572 ADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 631

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
               ++ +++ +M  +G KPD + Y+ MI  L    ++ +AL  +++M+       P+  
Sbjct: 632 HDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVI--DGYSPNTV 689

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQDGTDFL 603
           T+ +L+N LCK   +  +  L   M+     P+  T N FL   A +  +E  +D    +
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 604 -----------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                      N L   L K  +      ++  + +   SP   ++  ++ ELC+   I 
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 653 AAINKCWSNL 662
            A  + W+ +
Sbjct: 810 KAF-ELWNEM 818



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 157/591 (26%), Positives = 269/591 (45%), Gaps = 21/591 (3%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
            L +  + + I+ Y  S +      ++ RM  E        +  +     K   V+EA+ 
Sbjct: 195 HLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE 254

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           + + MV+       V     V      E L   AL   + ++    +  +P+    + +I
Sbjct: 255 VKNVMVNIGVTADEVTYRTLVYGFCRMEEL-EMALRITHDMI---RLGFVPSEANCSFMI 310

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             + +  LV+ A  L  ++      P+++ Y  L+D LCK  R D+A  L  EM   G  
Sbjct: 311 DELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLE 370

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+ +LI+ LCK G +  A  L D M  KG       YN+LI+G C +G+LD+A  L
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  MV     P   +Y  +I GL + G       +   M ER    N Y ++ LI+G  K
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           + K ++A +L+ +M++    PN V ++ +I+G C VG   +A ++  +M+  G   + +T
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y SL+ G   +    KA E   D+  +  V N    + L++GL  +G+  E   +W +M 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMA 610

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            RG K D+V+++ +++        E++  LF EM   E   +PD   Y  +++AL K+ N
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM--KEQGVKPDDIFYTCMIDALSKEEN 668

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-------------KEKLEAPQDGTDFLNEL 606
           +  +++  + M+  G  P+ VT  + +  L             KE L        F    
Sbjct: 669 MIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC 728

Query: 607 AIRLFKRQRTSGGFK-IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +  F  +      K +   MLQ  L+   S +  +++ LC+  +IQ AI+
Sbjct: 729 FLDYFATEGDMEKAKDLHSAMLQGHLASIVS-FNILIKGLCKAGKIQEAID 778



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 201/421 (47%), Gaps = 41/421 (9%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I  N  T + ++ ++ ++     A  LF +M       D Y Y   +   C+   LD A 
Sbjct: 159 ITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 218

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+  M+ +G   + V +NVL+ GLCKN  +  A ++ + M   G   +EVTY TL++G 
Sbjct: 219 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF 278

Query: 308 CLKGNLDKAVSLLDRMV-------ASKC----------------------------MPNE 332
           C    L+ A+ +   M+        + C                            +PN 
Sbjct: 279 CRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 338

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y  +I+ L K  R  D  R+   M  R    NE  Y+ LI  L K G  EDA+ L+ +
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 398

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M +KG K     Y++LI+G C+ G  D A  +L  M+  G    A +YS L+ G   +G 
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A+E+ ++MA+    +N   ++ LI+G C+D K+ EA  ++ +M+     P+ V ++ 
Sbjct: 459 LSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS----IDLLN 568
           MI G C  G++ +A +L+++M  +E   +PD +TY  L++ LC  S +S +     DL N
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQM--VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 569 S 569
           S
Sbjct: 577 S 577



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 186/427 (43%), Gaps = 23/427 (5%)

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
           YT   ++  L K  +   A  L D+M   G       +   I   C++  L  A  LV  
Sbjct: 164 YTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 223

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  +G   + V YN L++GLC    + +AV + + MV      +EVTY T++ G  ++  
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                R+   M    F  +E   S +I  L K+   E+A  L  ++ + G  PN   Y+A
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LID LC+  + D+A+ +  EM   G   N  TY+ L+    + G    A+ ++  M    
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
                  Y+ LI+G C+ G L  AR + + M+  G  P   +YS +I GLC  G +  A+
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAM 463

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           +L  EM   E     + +T+  L+N  CK   +  +  L + M+D    P+ VT N+ + 
Sbjct: 464 ELHREM--AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI- 520

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                     +G   +  +             F++ + M++  L P   T+  ++  LC 
Sbjct: 521 ----------EGYCLVGNI----------RKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 648 PKRIQAA 654
              +  A
Sbjct: 561 TSGVSKA 567



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 34/314 (10%)

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           VN+Y  S ++  L K  +   A  L+ +M++ G   +  VY+A I   C     D A  +
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           +  M + G  A+A  Y+ LM G  ++ +  +AVE+   M       +EV Y  L++G C 
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             +L  A  +   M+  G  P     S MI  L     VEEA  L  ++  L     P+V
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL--GMVPNV 338

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
           F YN L++ LCK      +  L   M  RG +P+ VT  I + AL ++          + 
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR---------GMI 389

Query: 605 ELAIRLFKRQRTSG-------------GF----------KIVEVMLQKFLSPQTSTWERV 641
           E A+ LF + R  G             G+           ++  M+++ L+P  +++  +
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 642 VQELCRPKRIQAAI 655
           +  LCR   + +A+
Sbjct: 450 IAGLCRNGDLSSAM 463



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 4/159 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N  L+    EG   +A + ++ ++       L + ++FN++IK +C+ G +  AI L 
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAMLQGH----LASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R++      PD  +Y T++  LCK   +++A  L +EM   G  P  V +N+ I     +
Sbjct: 781 RKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVH 840

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           GE  +A  +  NM   G  PN  TY  L+ G+ L  + D
Sbjct: 841 GESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 168/616 (27%), Positives = 293/616 (47%), Gaps = 62/616 (10%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFK-SLEMVLYRMRREKRVVLEKSFIFIFK 126
           E+F+   + G  Q    T   L++ +  +G  K +LE V  +M      V+  + +    
Sbjct: 172 ELFDKMSEKGC-QPNKFTVGILVRGFCRAGRTKQALEFVDGKMGGNVNRVVYNTLV---S 227

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           ++ K  + +EA +L   M ++      V +FNS ++ + + G    A   +  +     +
Sbjct: 228 SFCKQDMNDEAEKLVERMTEKGLLPDVV-TFNSRISALCRAGKVFEASRIFRDMQMDGEL 286

Query: 187 NI-LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
            +  PN +TFNL++K  C+ G+++ A  L   M        + +Y T + GL +  +L E
Sbjct: 287 GLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLE 346

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
              +LDEM  +G  P   ++N++++GLC+N  +  A +L+D M   G  P+ VTY TL+H
Sbjct: 347 GRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLH 406

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C KG + +A ++L+ M+   C PN  T  T++N L K GR  +   +L  M E+ + +
Sbjct: 407 GYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQL 466

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK----------------------PNTV 403
           +    + +++GL + G+ E A ++  +M   G                        P+ +
Sbjct: 467 DTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVI 526

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y+ LI+GLC+VGK +EA++   EM+      ++ TY + +  F + GK   A+ + KDM
Sbjct: 527 TYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDM 586

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            +N C      Y+ LI GL   G++ E   +  +M  RG  PD+  Y++MI+ LC  G  
Sbjct: 587 ERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKT 646

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           ++A  L +EML     S P+V ++ IL+ A CK  +                    V C 
Sbjct: 647 KDATSLLHEMLDKGVVS-PNVSSFKILIKAFCKSGDFK------------------VACE 687

Query: 584 IFLTAL-----KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
           +F  AL     KE L +        NE    L    + S   ++ E  L++ L  +   +
Sbjct: 688 LFDVALSVCGHKEALYSL-----MFNE----LLAGGKLSDAKELFEASLERSLLSKNFMY 738

Query: 639 ERVVQELCRPKRIQAA 654
           E ++ +LC+  R+  A
Sbjct: 739 EDLIDKLCKDGRLDDA 754



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 161/636 (25%), Positives = 264/636 (41%), Gaps = 127/636 (19%)

Query: 138 IRLFHTMVDE----FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           I L H M +E    F    +  S  S+LN++ Q   +H    F +      H    P+T 
Sbjct: 58  ILLRHNMDNEINHLFQLTTSHHSHISILNILSQSP-HHLDFAFSHFKSLRTH---FPSTP 113

Query: 194 TFNLVIKTVCRLGLVDN----AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
               +   + R  L  N       L+ +M      P+ YT+  L+  LC+ N LD A  L
Sbjct: 114 LPLQLYHLLLRSSLQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHAREL 173

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M   GC P   T  +L+ G C+ G   +A + VD     G   N V YNTL+   C 
Sbjct: 174 FDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDGKM--GGNVNRVVYNTLVSSFCK 231

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM----------- 358
           +   D+A  L++RM     +P+ VT+ + I+ L + G+  + +R+   M           
Sbjct: 232 QDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKP 291

Query: 359 -------------------EERKF---------HVNEYIYSTLISGLFKEGKAEDAMKLW 390
                              E R            V+   Y+T + GL + GK  +   + 
Sbjct: 292 NVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVL 351

Query: 391 KQMMEKGCKPNTVVYSALIDGLCR-----------------------------------V 415
            +M+E G +PN   Y+ ++DGLCR                                    
Sbjct: 352 DEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSK 411

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           GK  EA+ IL EMI  GC  N +T ++L+   ++ G+  +A E+ + M + +   + V  
Sbjct: 412 GKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTC 471

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCK----------------------PDVVAYSSM 513
           +++++GLC +G+L +A  V ++M + G                        PDV+ Y+++
Sbjct: 472 NIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTL 531

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I+GLC  G +EEA K F EM+       PD  TY+  +   CKQ  IS ++ +L  M   
Sbjct: 532 INGLCKVGKLEEAKKKFIEMMA--KNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERN 589

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQ--DGTDFLNELAIR------------LFKRQRTSGG 619
           GC   L T N  +  L  K +  +     D + E  I             L +  +T   
Sbjct: 590 GCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDA 649

Query: 620 FKIVEVMLQK-FLSPQTSTWERVVQELCRPKRIQAA 654
             ++  ML K  +SP  S+++ +++  C+    + A
Sbjct: 650 TSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVA 685



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 205/426 (48%), Gaps = 13/426 (3%)

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           ++NR      L  +M   G  P   TFN+LI  LC++  L  A +L D M  KGC PN+ 
Sbjct: 128 QQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKF 187

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T   L+ G C  G   +A+  +D  +      N V Y T+++   K     +  +++  M
Sbjct: 188 TVGILVRGFCRAGRTKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVERM 245

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG----CKPNTVVYSALIDGLCR 414
            E+    +   +++ IS L + GK  +A ++++ M   G     KPN V ++ ++ G C+
Sbjct: 246 TEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQ 305

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G  +EA  ++  M   G   +  +Y++ + G   +GK  +   +  +M +N    N   
Sbjct: 306 EGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYS 365

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y++++ GLC +  + +AR +   M+S G  PD V Y++++HG C+ G V EA  + NEM 
Sbjct: 366 YNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEM- 424

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KE 591
            +     P+ +T N LLN+L K+   S + ++L  M ++    D VTCNI +  L    E
Sbjct: 425 -IRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGE 483

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
             +A +  ++   +    L K    +G    +  +      P   T+  ++  LC+  ++
Sbjct: 484 LEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNV--PDVITYTTLINGLCKVGKL 541

Query: 652 QAAINK 657
           + A  K
Sbjct: 542 EEAKKK 547



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 146/559 (26%), Positives = 246/559 (44%), Gaps = 103/559 (18%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK----SFIFIFKAYGKAHLVEEAIRL 140
           TF S I     +G       +   M+ +  + L K    +F  + K + +  ++EEA  L
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
             TM    +   +++S+N+ L  +++ G   + LE  + +       I PN  ++N+V+ 
Sbjct: 316 VETMKKGGNFV-SLESYNTWLLGLLRNG---KLLEGRSVLDEMVENGIEPNIYSYNIVMD 371

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +CR  ++ +A +L   M      PD  TY TL+ G C + ++ EA  +L+EM   GC P
Sbjct: 372 GLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHP 431

Query: 261 TP-----------------------------------VTFNVLINGLCKNGELGRAAKLV 285
                                                VT N+++NGLC+NGEL +A+++V
Sbjct: 432 NTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVV 491

Query: 286 DNMFLKGC----------------------LPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
             M+  G                       +P+ +TY TLI+GLC  G L++A      M
Sbjct: 492 SEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEM 551

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +A    P+ VTY T +    K G+     RVL  ME          Y++LI GL  +G+ 
Sbjct: 552 MAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQI 611

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA-NAFTYSS 442
            +   L  +M E+G  P+   Y+ +I+ LC  GK  +A  +L EM++ G  + N  ++  
Sbjct: 612 FEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKI 671

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV------------------------- 477
           L+K F +SG    A E++ D+A + C + E  YS+                         
Sbjct: 672 LIKAFCKSGDFKVACELF-DVALSVCGHKEALYSLMFNELLAGGKLSDAKELFEASLERS 730

Query: 478 ----------LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
                     LI  LC+DG+L +A  +  +++ +G   D  ++  +I GL   G+ ++A 
Sbjct: 731 LLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQAD 790

Query: 528 KLFNEM-LCLEPKSQPDVF 545
           +L   M L LE K+    +
Sbjct: 791 ELGRIMELALEDKTSDRTY 809


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 228/454 (50%), Gaps = 8/454 (1%)

Query: 87  YSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVD 146
           + +++     G F+S    L  +  +   +   +   +  A  +   V+E + L   +  
Sbjct: 147 HVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKL-P 205

Query: 147 EFHCKRTVKSFNSVLNVIIQ-------EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            F C+  + S+N+VL  +         E L    +  +  +         P+   +  +I
Sbjct: 206 SFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATII 265

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C+ G  + A  +   MP    +P++  Y T++ GLC   R +EA  LL EM  + C 
Sbjct: 266 DGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCP 325

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
              VTFN+L++  C+NG + R  +L++ M   GC+P+ +TY T+I+G C +G +D+AV L
Sbjct: 326 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVML 385

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  M A  C PN ++Y  ++ GL +  R VD   ++  M ++    N   ++TLI+ + K
Sbjct: 386 LKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCK 445

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           +G AE A++L KQM+  GC P+ + YS +IDGL + GK +EA E+L  MIN G   N   
Sbjct: 446 KGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTII 505

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YSS+       G+  K ++++  +       +   Y+ +I  LC+  +   A   +  M+
Sbjct: 506 YSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMV 565

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           S GC P+   Y+ +I GL + G V EA  L +E+
Sbjct: 566 SNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 240/476 (50%), Gaps = 36/476 (7%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
             + +N +I   CR G V  A +L   +PV    P+ YTY  ++  LC    + +A+ +L
Sbjct: 75  GVVAYNAMIAGYCRAGQVAAARRLAAAVPV---PPNAYTYFPIVRSLCARGLIADALTVL 131

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM + GC  TP   +V++   C+ G    A + +  +  KGC  +    N ++  +C +
Sbjct: 132 DEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQ 191

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR-------AVDGARV---LMSMEE 360
           G +D+ V LL ++ +  C P+ V+Y  ++ GL    R        V+  RV   L  M E
Sbjct: 192 GCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPE 251

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                +  +Y+T+I G+ K+G  E A  +  +M   G KPN V Y+ ++ GLC   + +E
Sbjct: 252 HGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEE 311

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           AE++L EM    C  +  T++ L+  F ++G   + +E+ + M ++ C+ + + Y+ +I+
Sbjct: 312 AEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVIN 371

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C++G + EA M+   M + GCKP+ ++Y+ ++ GLC A    +A +L + M  ++   
Sbjct: 372 GFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM--IQQGC 429

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P+  T+N L+N +CK+     +I+LL  M+  GC PDL++ +  +           DG 
Sbjct: 430 LPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVI-----------DG- 477

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                    L K  +T    +++ VM+ K ++P T  +  +   L R  R    I 
Sbjct: 478 ---------LGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQ 524



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 240/500 (48%), Gaps = 26/500 (5%)

Query: 170 YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT 229
           Y RA +       A  + + PN  T+  +++++C  GL+ +A+ +  EMP+R C      
Sbjct: 86  YCRAGQVAAARRLAAAVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPM 145

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
              +++  C+      AV  L  +   GC       N++++ +C+ G +    +L+  + 
Sbjct: 146 CHVILEAACRGGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLP 205

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSL----------LDRMVASKCMPNEVTYGTII 339
             GC P+ V+YN ++ GLC+    D    L          L +M    C P+   Y TII
Sbjct: 206 SFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATII 265

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +G+ K G       +L  M       N   Y+T++ GL    + E+A  L  +M ++ C 
Sbjct: 266 DGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCP 325

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
            + V ++ L+D  C+ G  D   E+L +M+ +GC  +  TY++++ GF + G   +AV +
Sbjct: 326 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVML 385

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            K+M+   C  N + Y++++ GLC   +  +A+ + + M+ +GC P+ V ++++I+ +C 
Sbjct: 386 LKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCK 445

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G  E+A++L  +ML       PD+ +Y+ +++ L K      +++LLN M+++G  P+ 
Sbjct: 446 KGLAEQAIELLKQMLV--NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNT 503

Query: 580 VTCNIFLTALKEK---------LEAPQDGT-----DFLNELAIRLFKRQRTSGGFKIVEV 625
           +  +   +AL  +          ++ QD T        N +   L KR  T         
Sbjct: 504 IIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAY 563

Query: 626 MLQKFLSPQTSTWERVVQEL 645
           M+     P  ST+  +++ L
Sbjct: 564 MVSNGCMPNESTYTILIRGL 583



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 165/279 (59%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + +TFN+++   C+ GLVD  I+L  +M    C PD+ TY T+++G CKE  +DEAV+LL
Sbjct: 327 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLL 386

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             M   GC P  +++ +++ GLC+      A +L+ +M  +GCLPN VT+NTLI+ +C K
Sbjct: 387 KNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKK 446

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G  ++A+ LL +M+ + C P+ ++Y T+I+GL K G+  +   +L  M  +    N  IY
Sbjct: 447 GLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIY 506

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S++ S L +EG+ +  ++++  + +   + +  +Y+A+I  LC+  + D A +    M++
Sbjct: 507 SSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVS 566

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           NGC  N  TY+ L++G    G   +A ++  ++     V
Sbjct: 567 NGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAV 605



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 138/282 (48%), Gaps = 4/282 (1%)

Query: 81  LGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           L D TF  L+  +  +G    +  +L +M     +    ++  +   + K  LV+EA+ L
Sbjct: 326 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVML 385

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
              M     CK    S+  VL  + +   +  A E  +H++       LPN +TFN +I 
Sbjct: 386 LKNM-SACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI---QQGCLPNPVTFNTLIN 441

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+ GL + AI+L ++M V  C PD+ +Y T++DGL K  + +EA+ LL+ M   G  P
Sbjct: 442 FMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITP 501

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             + ++ + + L + G   +  ++ D++       +   YN +I  LC +   D+A+   
Sbjct: 502 NTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFF 561

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
             MV++ CMPNE TY  +I GL   G   +   +L  +  R+
Sbjct: 562 AYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRR 603



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 137/340 (40%), Gaps = 59/340 (17%)

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK------------- 417
           S LI  L   G+  DA +    +   G     V Y+A+I G CR G+             
Sbjct: 48  SALIRSLCAAGRTADAAR---ALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVPV 104

Query: 418 -PD------------------EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+                  +A  +L EM   GCAA       +++     G    AV 
Sbjct: 105 PPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVR 164

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
             + +    C  +    ++++  +CE G + E   +  ++ S GC+PD+V+Y++++ GLC
Sbjct: 165 ALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLC 224

Query: 519 NAGSVEEALKLFNEMLCL-EPKSQ-------PDVFTYNILLNALCKQSNISHSIDLLNSM 570
            A   ++  +L  EM+ + E  SQ       PD+  Y  +++ +CK  +   + D+L+ M
Sbjct: 225 MAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRM 284

Query: 571 MDRGCDPDLVTCNIFLTAL--KEKLE-------------APQDGTDFLNELAIRLFKRQR 615
              G  P++V  N  L  L   E+ E              P D   F N L     +   
Sbjct: 285 PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTF-NILVDFFCQNGL 343

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                +++E ML+    P   T+  V+   C+   +  A+
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAV 383


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 228/436 (52%), Gaps = 11/436 (2%)

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           +++ G +++AL+ +          +  +++T+N++I+  C    +D A  L REM V   
Sbjct: 1   MVRAGSHNQALQLFRE----NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGM 56

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLD-EMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
           + +  T   ++ GLC+  R+ +A+   D  +++    P  V++  LINGLCK G +  A 
Sbjct: 57  QCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAF 116

Query: 283 KLVDNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            L   M   G C PN  TYN L+ GLC +  LD A +++         P+ VTY T++  
Sbjct: 117 DLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAA 176

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L +LGR  +       M E  +      ++ +I+GL +  +  DA++++ +M+++   PN
Sbjct: 177 LFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPN 236

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V YS +IDGLC+  + DEA+++L  M++ GC  +   Y+ L+ GF  +G+   A+ + +
Sbjct: 237 LVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLR 296

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            M    C+ + V Y+V+I  LC+ G++ +A  ++ ++++  C P+VV YS++I G C A 
Sbjct: 297 RMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRAS 356

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            V+E  K+  EM C     +P+V TYN ++  L        +  +   M + G  PD  T
Sbjct: 357 RVDEGGKVMREMAC-----RPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDART 411

Query: 582 CNIFLTALKEKLEAPQ 597
                 AL+   + P 
Sbjct: 412 YRGLKRALRMIDQPPH 427



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 173/361 (47%), Gaps = 26/361 (7%)

Query: 294 LP-NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           LP + VTYN LI G C   +LD A SLL  M       N+ T   I+ GL + GR     
Sbjct: 21  LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQAL 80

Query: 353 RVL-MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALID 410
                S+E      +   Y+TLI+GL K G+ + A  L+++M+  G C+PN   Y+AL+D
Sbjct: 81  EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVD 140

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC+  + D A  ++ E      A +  TY++LM   F+ G+  +A+  +  M +   V 
Sbjct: 141 GLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVP 200

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
             V ++ +I GLC   +L +A  V+ +M+ R   P++V YS +I GLC +  ++EA +L 
Sbjct: 201 TLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           + M+      +PD+  Y  L+        +  ++ LL  M+ +GC PD+VT  + +    
Sbjct: 261 DRMV--SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVID--- 315

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                             +L K  R     +I   ++    SP   T+  ++   CR  R
Sbjct: 316 ------------------KLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR 357

Query: 651 I 651
           +
Sbjct: 358 V 358



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 142/265 (53%), Gaps = 6/265 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++N+++  + Q G    AL  +  +    +   +P  ++FN +I  +CR   + +A++
Sbjct: 167 VVTYNTLMAALFQLGRVDEALATFTQMTEEGY---VPTLVSFNAIITGLCRARRLADALE 223

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F EM  R+  P++ TY  ++DGLCK ++LDEA  LLD M  +GC P  V +  L+ G  
Sbjct: 224 VFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFS 283

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G L  A  L+  M  +GC+P+ VTY  +I  LC  G +D A  +   +VA+KC PN V
Sbjct: 284 AAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVV 343

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I G  +  R  +G +V+  M  R    N   Y+T+I GL    + E+A  ++++M
Sbjct: 344 TYSALIGGYCRASRVDEGGKVMREMACRP---NVVTYNTMIWGLSMVDRNEEAYGMFREM 400

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKP 418
            E G  P+   Y  L   L  + +P
Sbjct: 401 SECGFVPDARTYRGLKRALRMIDQP 425



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 141/310 (45%), Gaps = 7/310 (2%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           ++F      G  +    T+ +L+          +   V+   R+        ++  +  A
Sbjct: 117 DLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAA 176

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
             +   V+EA+  F  M +E +   T+ SFN+++  + +      ALE +N +++    +
Sbjct: 177 LFQLGRVDEALATFTQMTEEGYVP-TLVSFNAIITGLCRARRLADALEVFNEMID---RD 232

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             PN +T+++VI  +C+   +D A QL   M    C PD+  Y  L+ G     RLD A+
Sbjct: 233 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSAL 292

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LL  M   GC P  VT+ V+I+ LCK G +  A ++   +    C PN VTY+ LI G 
Sbjct: 293 GLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGY 352

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C    +D+   ++  M    C PN VTY T+I GL  + R  +   +   M E  F  + 
Sbjct: 353 CRASRVDEGGKVMREMA---CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDA 409

Query: 368 YIYSTLISGL 377
             Y  L   L
Sbjct: 410 RTYRGLKRAL 419



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 115/247 (46%), Gaps = 28/247 (11%)

Query: 412 LCRVGKPDEAEEILFEMINNGC--AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           + R G  ++A ++  E   N C   A++ TY+ L++GF  +     A  + ++M      
Sbjct: 1   MVRAGSHNQALQLFRE---NPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQ 57

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG-CKPDVVAYSSMIHGLCNAGSVEEALK 528
            N+   S+++ GLC  G++ +A   +   L     +PDVV+Y+++I+GLC  G V+ A  
Sbjct: 58  CNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFD 117

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           LF +M+      +P+ FTYN L++ LCKQ  +  +  ++     R   PD+VT N  + A
Sbjct: 118 LFRKMVA-AGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAA 176

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
           L                     F+  R          M ++   P   ++  ++  LCR 
Sbjct: 177 L---------------------FQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRA 215

Query: 649 KRIQAAI 655
           +R+  A+
Sbjct: 216 RRLADAL 222


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 226/452 (50%), Gaps = 38/452 (8%)

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
           ++  +   K   +  ++  F ++I    ++G+ + A++ F  M   +C PD++TY  ++ 
Sbjct: 111 YWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR 170

Query: 236 GLCKENRLDE-AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            + +E      A  + +EM    C P   TF +L++GL K G    A K+ D+M  +G  
Sbjct: 171 VMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS 230

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN VTY  LI GLC +G+ D A  L   M  S   P+ V +  +++G  KLGR V+   +
Sbjct: 231 PNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L   E+  F +    YS+LI GLF+  +   A +L+  M++K  KP+ ++Y+ LI GL +
Sbjct: 291 LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            GK ++A ++L  M + G + + + Y++++K     G   +   +  +M++     +   
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           +++LI  +C +G +REA  ++T++   GC P V  ++++I GLC +G ++EA  L ++M 
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470

Query: 535 CLEPK-------------------------------------SQPDVFTYNILLNALCKQ 557
              P                                      S PD+ +YN+L+N  C+ 
Sbjct: 471 VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +I  ++ LLN +  +G  PD VT N  +  L
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 210/450 (46%), Gaps = 44/450 (9%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHR-ALEFYNH 179
           F  +  AY K  + E+A+  F  M  EF C+  V ++N +L V+++E ++   A   YN 
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRM-KEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNE 188

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++     N  PN  TF +++  + + G   +A ++F +M  R   P+  TY  L+ GLC+
Sbjct: 189 MLKC---NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
               D+A  L  EMQ  G +P  V  N L++G CK G +  A +L+      G +     
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y++LI GL       +A  L   M+     P+ + Y  +I GL K G+  D  ++L SM 
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    + Y Y+ +I  L   G  E+   L  +M E    P+   ++ LI  +CR G   
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA----------------------- 456
           EAEEI  E+  +GC+ +  T+++L+ G  +SG+  +A                       
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485

Query: 457 -------------VEIWKDMA---KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
                        ++ ++D+A         + V Y+VLI+G C  G +  A  +   +  
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +G  PD V Y+++I+GL   G  EEA KLF
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLF 575



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 116/459 (25%), Positives = 210/459 (45%), Gaps = 45/459 (9%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           ++ ++S+++ + +   Y +A E Y +++     NI P+ + + ++I+ + + G +++A++
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKK---NIKPDIILYTILIQGLSKAGKIEDALK 359

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L   MP +   PD Y Y  ++  LC    L+E   L  EM     FP   T  +LI  +C
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM----VASKCM 329
           +NG +  A ++   +   GC P+  T+N LI GLC  G L +A  LL +M     AS  +
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
               +     + +V+ G  +   R L    +     +   Y+ LI+G  + G  + A+KL
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
              +  KG  P++V Y+ LI+GL RVG+ +EA ++ +    +    +   Y SLM     
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCR 597

Query: 450 SGKGHKAVEIW-KDMAKNNCVYNEVC---------------------------------Y 475
             K   A  +W K + K +C+ +E                                   Y
Sbjct: 598 KRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPY 657

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           ++ + GLC+ G+  EA MV++ +  +       +   +IHGLC    ++ A+++F   L 
Sbjct: 658 TIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLD 717

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
              K  P V  Y  LL++L + +     +  L + M+R 
Sbjct: 718 NNFKLMPRVCNY--LLSSLLESTEKMEIVSQLTNRMERA 754


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 236/466 (50%), Gaps = 34/466 (7%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIV--------------------------------NA 183
           S+N ++++++Q GL   ALE Y  +V                                  
Sbjct: 196 SYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEM 255

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           + + + PN  T+ + I+ + R G +D A ++ + M    C PD+ TY  L+D LC   +L
Sbjct: 256 ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKL 315

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A+ L  +M+     P  VT+  +++     G+LGR  +    M   G  P+ +T+  L
Sbjct: 316 DDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTIL 375

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++ LC  GN+D+A  LLD M     +PN  TY T+I+GL+++ R  D   +  +ME    
Sbjct: 376 VNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGV 435

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
               Y Y   I    K G+++ A++ +++M  +G  PN V  +A +  L  +G+  EA+ 
Sbjct: 436 VPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKV 495

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           I   + +NG A ++ TY+ +MK + ++G+  +A+E+  DM++N C  + +  + LI+ L 
Sbjct: 496 IFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLY 555

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G++ EA  ++ ++      P VV Y+++I GL   G V+ A++LF  M        P+
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASM--TGNGCPPN 613

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             T+N +L+ LCK   +  ++ +L  M    C PD++T N  +  L
Sbjct: 614 TITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGL 659



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 141/578 (24%), Positives = 262/578 (45%), Gaps = 81/578 (14%)

Query: 83   DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
            +++ YSL    A  G  +  +++  R++         ++  + K Y KA  V+EAI L  
Sbjct: 478  NASLYSL----AEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLS 533

Query: 143  TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             M  E  C+  +   NS++N + + G   R  E +      K M + P  +T+N +I  +
Sbjct: 534  DM-SENQCEPDIIVINSLINTLYKAG---RVDEAWKMFCRLKDMKLAPTVVTYNTLIAGL 589

Query: 203  CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
             + G V  A++LF  M    C P+  T+ T++D LCK + +D A+ +L +M    C P  
Sbjct: 590  GKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDV 649

Query: 263  VTFNVLINGLC----------------------------------KNGELGRAAKLVDNM 288
            +TFN +I+GL                                   KNG +  A K+ ++ 
Sbjct: 650  LTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDF 709

Query: 289  FLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
              + G   +   +  L+ G+  +   +K +   DR+V  +   +      II  L K  +
Sbjct: 710  VHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQ 769

Query: 348  AVDGARVLM----------SMEERKF--------HVNE------------------YIYS 371
            A+    V +          ++E   F        H +E                  + Y+
Sbjct: 770  ALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYN 829

Query: 372  TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
             L+    K GK  +  +L++QM+   CKPNT+ ++ +I  L +    D+A ++ +++++ 
Sbjct: 830  LLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889

Query: 432  GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
              +    TY  L+ G  +SG+  +A E++++M    C  N   Y++LI+G  + G +  A
Sbjct: 890  DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTA 949

Query: 492  RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
              ++ +M+  G +PD+ +Y+S++  LC AG V++AL  F ++   +     D   YN+++
Sbjct: 950  CELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK--QTGLYLDSIAYNLMI 1007

Query: 552  NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            + L +   I  ++ L + M  RG +PDL T N  +  L
Sbjct: 1008 DGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNL 1045



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 153/635 (24%), Positives = 267/635 (42%), Gaps = 113/635 (17%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  A   A  +++A+ LF  M    H    V ++ ++L+     G   R  EF++ 
Sbjct: 301 TYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRV-TYITMLDKFSDCGDLGRVKEFWSE 359

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +    +    P+ +TF +++  +C+ G +D A  L   M  +   P+++TY TL+ GL +
Sbjct: 360 MEADGYA---PDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLR 416

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN--- 296
            NRLD+A+ L + M+  G  PT  T+ + I+   K+G   +A +  + M ++G  PN   
Sbjct: 417 VNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVA 476

Query: 297 --------------------------------EVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
                                            VTYN ++      G +D+A+ LL  M 
Sbjct: 477 CNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMS 536

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            ++C P+ +   ++IN L K GR  +  ++   +++ K       Y+TLI+GL KEG+ +
Sbjct: 537 ENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQ 596

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS-- 442
            AM+L+  M   GC PNT+ ++ ++D LC+  + D A ++L++M    C  +  T+++  
Sbjct: 597 RAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTII 656

Query: 443 --------------------------------LMKGFFESGKGHKAVEIWKDMAKNNCVY 470
                                           L+ G  ++G    A +I +D      VY
Sbjct: 657 HGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVY 716

Query: 471 NE---------------------------VCYSV---------LIHGLCEDGKLREARMV 494
            +                           VC  V         +I  LC+  +   A+ V
Sbjct: 717 VDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSV 776

Query: 495 WTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           + +     G KP + +Y+ +I G     + E A  LF EM        PDVFTYN+LL+A
Sbjct: 777 FIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMK--NAGCAPDVFTYNLLLDA 834

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
             K   I+   +L   M+   C P+ +T NI +  L  K  +     D   +L    F  
Sbjct: 835 HGKSGKINELFELYEQMICSSCKPNTITHNIIIANLV-KSNSLDKALDLFYDLVSGDFSP 893

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
              + G  +  ++    L      +E +V   CRP
Sbjct: 894 TPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRP 928



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 145/568 (25%), Positives = 247/568 (43%), Gaps = 83/568 (14%)

Query: 88   SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
            SLI     +G       +  R++  K      ++  +    GK   V+ A+ LF +M   
Sbjct: 549  SLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGN 608

Query: 148  FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN-----LVIK-- 200
              C     +FN++L+ + +      AL+    +     MN +P+ LTFN     LVI+  
Sbjct: 609  -GCPPNTITFNTILDCLCKNDEVDLALKM---LYKMTTMNCMPDVLTFNTIIHGLVIEKR 664

Query: 201  --------------------TVCRL-------GLVDNAIQLFREMPVR-NCEPDIYTYCT 232
                                T+C L       GL+++A ++  +   R     D   +  
Sbjct: 665  VSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWED 724

Query: 233  LMDGLCKENRLDEAVLLLDEMQVD------------------------------------ 256
            LM G+  +   ++ +L  D +                                       
Sbjct: 725  LMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKEL 784

Query: 257  GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            G  PT  ++N LI G         A  L   M   GC P+  TYN L+      G +++ 
Sbjct: 785  GVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINEL 844

Query: 317  VSLLDRMVASKCMPNEVTYGTIINGLVK---LGRAVDGARVLMSMEERKFHVNEYIYSTL 373
              L ++M+ S C PN +T+  II  LVK   L +A+D    L+S +   F      Y  L
Sbjct: 845  FELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD---FSPTPCTYGPL 901

Query: 374  ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
            + GL K G+ E+A +L+++M++ GC+PN  +Y+ LI+G  + G  + A E+   M+  G 
Sbjct: 902  LDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGI 961

Query: 434  AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
              +  +Y+SL+    E+G+   A+  ++ + +     + + Y+++I GL    ++ EA  
Sbjct: 962  RPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALT 1021

Query: 494  VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
            ++ +M SRG  PD+  Y+S+I  L  AG VE+A KL+ E+  +    +P+VFTYN L+  
Sbjct: 1022 LYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFI--GLEPNVFTYNALIRG 1079

Query: 554  LCKQSNISHSIDLLNSMMDRGCDPDLVT 581
                 N   +  +   MM  GC P+  T
Sbjct: 1080 YSMSGNSDSAYAVYKRMMVGGCSPNTGT 1107



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 181/350 (51%), Gaps = 7/350 (2%)

Query: 130  KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
            K  LV +++  F     E   K T++S+N ++   +  G+++  +  +N     K+    
Sbjct: 768  KQALVAQSV--FIRFTKELGVKPTLESYNFLIEGFL--GVHNDEMA-WNLFTEMKNAGCA 822

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            P+  T+NL++    + G ++   +L+ +M   +C+P+  T+  ++  L K N LD+A+ L
Sbjct: 823  PDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDL 882

Query: 250  LDEMQVDGCF-PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
              ++ V G F PTP T+  L++GL K+G L  A +L + M   GC PN   YN LI+G  
Sbjct: 883  FYDL-VSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFG 941

Query: 309  LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
              G+++ A  L  RMV     P+  +Y +++  L + GR  D       +++   +++  
Sbjct: 942  KTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSI 1001

Query: 369  IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
             Y+ +I GL +  + E+A+ L+ +M  +G  P+   Y++LI  L   G  ++A ++  E+
Sbjct: 1002 AYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEEL 1061

Query: 429  INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
               G   N FTY++L++G+  SG    A  ++K M    C  N   ++ L
Sbjct: 1062 QFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 120/524 (22%), Positives = 225/524 (42%), Gaps = 34/524 (6%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL-T 194
           +A   F+++ +      T ++ N +L ++      HR +     + N     I+   L T
Sbjct: 106 DAFSYFNSVAEMPFVVHTTETCNHMLEIL----RIHRRVGDMVVVFNLMQNQIIKRDLNT 161

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           + ++ K +   G +      F +M       + Y+Y  L+  L +     EA+ +   M 
Sbjct: 162 YLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMV 221

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           ++G  P+  TF+ L+    K  +      L++ M   G  PN  TY   I  L   G +D
Sbjct: 222 LEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRID 281

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A  ++ RM    C P+ VTY  +I+ L   G+  D   + + M+      +   Y T++
Sbjct: 282 EACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITML 341

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
                 G      + W +M   G  P+ + ++ L++ LC+ G  DEA  +L  M   G  
Sbjct: 342 DKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVL 401

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  TY++L+ G     +   A++++ +M     V     Y + I    + G+  +A   
Sbjct: 402 PNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALET 461

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILL 551
           + +M  RG  P++VA ++ ++ L   G + EA  +FN +     KS    PD  TYN+++
Sbjct: 462 FEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRL-----KSNGLAPDSVTYNMMM 516

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
               K   +  +I+LL+ M +  C+PD++                      +N L   L+
Sbjct: 517 KCYSKAGQVDEAIELLSDMSENQCEPDIIV---------------------INSLINTLY 555

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           K  R    +K+   +    L+P   T+  ++  L +  ++Q A+
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAM 599



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 175/370 (47%), Gaps = 3/370 (0%)

Query: 146  DEFHCKRTVKSFNSVLNVIIQEGLYHR-ALEFYNHIVN-AKHMNILPNTLTFNLVIKTVC 203
            D   C R  K   SVL  II+    H+ AL   +  +   K + + P   ++N +I+   
Sbjct: 743  DRLVCGRVCKD-GSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFL 801

Query: 204  RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             +   + A  LF EM    C PD++TY  L+D   K  +++E   L ++M    C P  +
Sbjct: 802  GVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTI 861

Query: 264  TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            T N++I  L K+  L +A  L  ++      P   TY  L+ GL   G L++A  L + M
Sbjct: 862  THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921

Query: 324  VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            V   C PN   Y  +ING  K G       +   M       +   Y++L+  L + G+ 
Sbjct: 922  VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRV 981

Query: 384  EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +DA+  ++++ + G   +++ Y+ +IDGL R  + +EA  +  EM + G   + FTY+SL
Sbjct: 982  DDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041

Query: 444  MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
            +     +G   +A ++++++       N   Y+ LI G    G    A  V+ +M+  GC
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101

Query: 504  KPDVVAYSSM 513
             P+   ++ +
Sbjct: 1102 SPNTGTFAQL 1111



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/211 (32%), Positives = 107/211 (50%), Gaps = 4/211 (1%)

Query: 130  KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
            K+  +EEA  LF  MVD + C+     +N ++N   + G  + A E +  +V      I 
Sbjct: 907  KSGRLEEAKELFEEMVD-YGCRPNNAIYNILINGFGKTGDVNTACELFKRMVRE---GIR 962

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            P+  ++  ++  +C  G VD+A+  F ++       D   Y  ++DGL + +R++EA+ L
Sbjct: 963  PDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTL 1022

Query: 250  LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             DEMQ  G  P   T+N LI  L   G + +A KL + +   G  PN  TYN LI G  +
Sbjct: 1023 YDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSM 1082

Query: 310  KGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
             GN D A ++  RM+   C PN  T+  + N
Sbjct: 1083 SGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 165/588 (28%), Positives = 281/588 (47%), Gaps = 30/588 (5%)

Query: 22  MKTLSLTTIPSE-RSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQ 80
           M  L LT  P    S RF S+   +++ K   + P  N+    P S      TP +   Q
Sbjct: 1   MNCLRLTQFPKRCLSTRFPSLDPKLNNTKTPFSSP--NSTYTTPNSHTF--DTPTIS--Q 54

Query: 81  LGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           L     +S ++      +  SL   L+    +  ++L   F +  K +G  H VE+  RL
Sbjct: 55  LIAKQHWSKLKTIVKETNPSSLLQHLFNSEAQPDLIL-CYFKWTQKEFGAIHNVEQFCRL 113

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
            H + +     +      ++L+   +   Y  +  F  H ++        N++  ++++ 
Sbjct: 114 LHLLANA----KNYNKIRALLDSFAKNAHYSNSTIF--HSLSVLGSWGCANSIIVDMLVW 167

Query: 201 TVCRLGLVDNAIQLFRE-------MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
              + G +D A++ F         +   +C P       ++  L KE R+     +  EM
Sbjct: 168 AYVKNGEMDLALEGFDRAGDYGFRLSALSCNP-------MLVSLVKEGRIGVVESVYKEM 220

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                    VTF+V+INGLCK G+  +A  +V++M   G  P+ +TYNT+I G C  G +
Sbjct: 221 IRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKM 280

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            KA +LL  MVA +  PNE+T+  +I+G  +        +V   M+ +    N   Y++L
Sbjct: 281 FKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSL 340

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+GL   GK ++A+ L  +M   G KPN V Y+ALI+G C+     EA E+L ++   G 
Sbjct: 341 INGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGL 400

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A N  T+++L+  + ++G+   A  +   M       N   Y+ LI G C +G ++EAR 
Sbjct: 401 APNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARK 460

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           +  +M   G K D+V Y+ ++  LC  G   +A++L +EM  +E K  + ++ TYN+L+ 
Sbjct: 461 LAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIK 520

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ-DG 599
             C +  +  +  LLN M+++G  P+  T +I    + EK   P  DG
Sbjct: 521 GFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDG 568



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 160/310 (51%), Gaps = 11/310 (3%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V ++N++++   + G   +A      +V  +   I PN +TFN++I   CR   V  A 
Sbjct: 263 SVITYNTIIDGYCKAGKMFKADALLKEMVAKR---IHPNEITFNILIDGFCRDENVTAAK 319

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           ++F EM  +  +P++ TY +L++GLC   +LDEA+ L D+M   G  P  VT+N LING 
Sbjct: 320 KVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGF 379

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK   L  A +++D++  +G  PN +T+NTLI      G +D A  L   M+ +   PN 
Sbjct: 380 CKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNV 439

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            TY  +I G  + G   +  ++   ME      +   Y+ L+  L K+G+   A++L  +
Sbjct: 440 STYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDE 499

Query: 393 MM---EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM----- 444
           M    +KG + N V Y+ LI G C  GK +EA  +L EM+  G   N  TY  L      
Sbjct: 500 MTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMME 559

Query: 445 KGFFESGKGH 454
           KGF     GH
Sbjct: 560 KGFIPDIDGH 569



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 197/407 (48%), Gaps = 22/407 (5%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           GC    +  ++L+    KNGE+  A +  D     G   + ++ N ++  L  +G +   
Sbjct: 155 GC-ANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
            S+   M+  +   N VT+  +INGL K+G+      V+  M+   F  +   Y+T+I G
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K GK   A  L K+M+ K   PN + ++ LIDG CR      A+++  EM   G   N
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY+SL+ G   +GK  +A+ +   M+      N V Y+ LI+G C+   L+EAR +  
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            +  RG  P+V+ ++++I     AG +++A  L + ML  +    P+V TYN L+   C+
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML--DTGVCPNVSTYNCLIVGFCR 451

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
           + N+  +  L   M   G   DLVT NI + AL +K E  +     L+E+ +   K +R 
Sbjct: 452 EGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET-RKAVRLLDEMTLMEKKGRRA 510

Query: 617 S--------GGF----------KIVEVMLQKFLSPQTSTWERVVQEL 645
           +         GF          +++  ML+K L P  +T++ +  E+
Sbjct: 511 NIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEM 557



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 154/292 (52%), Gaps = 23/292 (7%)

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
           F ++    + ++  L KEG+      ++K+M+ +    N V +  +I+GLC+VGK  +A 
Sbjct: 190 FRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAG 249

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           +++ +M   G + +  TY++++ G+ ++GK  KA  + K+M       NE+ +++LI G 
Sbjct: 250 DVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGF 309

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C D  +  A+ V+ +M  +G +P+VV Y+S+I+GLC+ G ++EAL L ++M  +  K  P
Sbjct: 310 CRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLK--P 367

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           +V TYN L+N  CK+  +  + ++L+ +  RG  P+++T N  + A              
Sbjct: 368 NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYG------------ 415

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    K  R    F +  +ML   + P  ST+  ++   CR   ++ A
Sbjct: 416 ---------KAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEA 458



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 97/224 (43%), Gaps = 24/224 (10%)

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           GCA N+     L+  + ++G+   A+E +          + +  + ++  L ++G++   
Sbjct: 155 GCA-NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             V+ +M+ R    +VV +  +I+GLC  G  ++A  +  +M        P V TYN ++
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAW--GFSPSVITYNTII 271

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           +  CK   +  +  LL  M+ +   P+ +T NI +           DG            
Sbjct: 272 DGYCKAGKMFKADALLKEMVAKRIHPNEITFNILI-----------DG----------FC 310

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           + +  +   K+ E M ++ L P   T+  ++  LC   ++  A+
Sbjct: 311 RDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/439 (30%), Positives = 230/439 (52%), Gaps = 6/439 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FN++L  +  E     A+  +  +V  K     PN + +  V+  + + G  +  + 
Sbjct: 132 VVTFNTLLGGLFAENKVTDAVVLFKKLVREKICE--PNEVMYGTVMNGLSKRGHTEKTLS 189

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L R M   N +PD+ TY  ++D LCK+  LD A+ LL+EM+     P   T+N LI+GLC
Sbjct: 190 LLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLC 249

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G+  +   L+  M      PN  T++ LI GLC +G ++ A  ++  M+     P+ +
Sbjct: 250 KLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDII 309

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  I++G    G+     RV   + ++    N + YS LI+G  K+     AM+L+ ++
Sbjct: 310 TYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEI 369

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            +KG KP+TV YS ++ GL  VG+  +A++I  EM+  G   +   +S+L+ G+F+ G  
Sbjct: 370 SQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLV 429

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ ++  + +N    N   Y+V+I+GLC++ ++REA  ++ ++ S G  PDV  Y+ M
Sbjct: 430 EEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVM 489

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQP-DVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           I G C  G  +E   +  +M   E    P +  TYN+++    + + IS  +  +  M  
Sbjct: 490 ITGFCREGLFDEVKGILRKM---EDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAG 546

Query: 573 RGCDPDLVTCNIFLTALKE 591
           RG   D  T  + +  LKE
Sbjct: 547 RGFSFDATTTGVLINVLKE 565



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 245/523 (46%), Gaps = 80/523 (15%)

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM-----PVRNC 223
           L+HR +           M  LP+ + F+ + KT+  +      + LFREM     P+ + 
Sbjct: 49  LFHRMV----------RMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDS 98

Query: 224 EPDIYT--YC----------------------------TLMDGLCKENRLDEAVLLLDEM 253
             +I T  YC                            TL+ GL  EN++ +AV+L  ++
Sbjct: 99  ILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKL 158

Query: 254 QVDG-CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
             +  C P  V +  ++NGL K G   +   L+  M      P+  TY+ +I  LC   N
Sbjct: 159 VREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDIN 218

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD A++LL+ M      PN  TY ++I+GL KLG+      +L  M     + N + +S 
Sbjct: 219 LDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSI 278

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI GL KEGK EDA ++ + M+EKG +P+ + YSA++DG C  G+ D A  +   + + G
Sbjct: 279 LIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG 338

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N F+YS L+ G+ +     KA++++ ++++     + V YS ++HGL E G++ +A+
Sbjct: 339 IKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAK 398

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------L 534
            ++ +ML  G  PD+  +S+++ G    G VEEA+ LF+++                  L
Sbjct: 399 KIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGL 458

Query: 535 CLEPKSQ---------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           C   + +               PDV TYN+++   C++        +L  M D GC  + 
Sbjct: 459 CKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANN 518

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           +T N+ +           +   F+ E+A R F    T+ G  I
Sbjct: 519 ITYNVIMQGFFRS-NKISEIVSFMKEMAGRGFSFDATTTGVLI 560



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 129/456 (28%), Positives = 219/456 (48%), Gaps = 19/456 (4%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D+A+ LF  M      P +  +  L   +         V L  EM++ G   +    N+
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLP-NEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           + N  C    +  A  ++  ++LK  +P N VT+NTL+ GL  +  +  AV L  ++V  
Sbjct: 103 VTNSYCLRHRIDCAFSVLP-IYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVRE 161

Query: 327 K-CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           K C PNEV YGT++NGL K G       +L  ME+     +   YS +I  L K+   + 
Sbjct: 162 KICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDA 221

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A+ L  +M +K   PN   Y++LIDGLC++G+ ++ + +L EM+N     N  T+S L+ 
Sbjct: 222 AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILID 281

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G  + GK   A E+ + M +     + + YS ++ G C  G++  AR V+  +  +G KP
Sbjct: 282 GLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKP 341

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           ++ +YS +I+G C   ++ +A++LF E+   +   +PD  TY+ +L+ L +   I  +  
Sbjct: 342 NIFSYSILINGYCKKKNLAKAMQLFGEI--SQKGLKPDTVTYSTILHGLIEVGRIGDAKK 399

Query: 566 LLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTD--FLNELAIRLF 611
           + + M+  G  PD+   +  L              L  KLE  ++ T+  F   +   L 
Sbjct: 400 IFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLC 459

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           K  R      I E +    L P   T+  ++   CR
Sbjct: 460 KNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCR 495



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/367 (29%), Positives = 195/367 (53%), Gaps = 4/367 (1%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           +++  +  A  K   ++ AI L + M  + +    + ++NS+++ + + G + +     +
Sbjct: 204 RTYSIVIDALCKDINLDAAINLLNEM-KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLS 262

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +VN   +NI PN  TF+++I  +C+ G V++A ++ R M  +  EPDI TY  +MDG C
Sbjct: 263 EMVN---LNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYC 319

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
              ++D A  + + ++  G  P   ++++LING CK   L +A +L   +  KG  P+ V
Sbjct: 320 LRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTV 379

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY+T++HGL   G +  A  + D M+     P+   + T++ G  K G   +   +   +
Sbjct: 380 TYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKL 439

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E  +   N   Y+ +I+GL K  +  +A  +++++   G  P+   Y+ +I G CR G  
Sbjct: 440 ERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLF 499

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           DE + IL +M +NGC AN  TY+ +M+GFF S K  + V   K+MA     ++     VL
Sbjct: 500 DEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVL 559

Query: 479 IHGLCED 485
           I+ L E+
Sbjct: 560 INVLKEN 566



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 202/393 (51%), Gaps = 4/393 (1%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+ + L   M ++ + K  V++++ V++ + ++     A+   N +   K  NI PN  T
Sbjct: 185 EKTLSLLRIM-EQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEM---KQKNIPPNIFT 240

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I  +C+LG  +    L  EM   N  P+++T+  L+DGLCKE ++++A  ++  M 
Sbjct: 241 YNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMI 300

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  +T++ +++G C  G++ RA ++ + +  KG  PN  +Y+ LI+G C K NL 
Sbjct: 301 EKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLA 360

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA+ L   +      P+ VTY TI++GL+++GR  D  ++   M       +  ++STL+
Sbjct: 361 KAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLL 420

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G FK G  E+AM L+ ++       N   Y+ +I+GLC+  +  EA  I  ++ + G  
Sbjct: 421 FGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLI 480

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +  TY+ ++ GF   G   +   I + M  N C  N + Y+V++ G     K+ E    
Sbjct: 481 PDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSF 540

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
             +M  RG   D      +I+ L    S+ + +
Sbjct: 541 MKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/250 (23%), Positives = 117/250 (46%), Gaps = 11/250 (4%)

Query: 108 RMRREKRVVLEK-------SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSV 160
           R RR   V+ +K       S+  +   Y K   + +A++LF   + +   K    +++++
Sbjct: 326 RARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGE-ISQKGLKPDTVTYSTI 384

Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           L+ +I+ G    A + ++ ++    +   P+    + ++    + GLV+ A+ LF ++  
Sbjct: 385 LHGLIEVGRIGDAKKIFDEML---RVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLER 441

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
              + +I  Y  +++GLCK +R+ EA  + +++   G  P   T+NV+I G C+ G    
Sbjct: 442 NREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDE 501

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
              ++  M   GC  N +TYN ++ G      + + VS +  M       +  T G +IN
Sbjct: 502 VKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561

Query: 341 GLVKLGRAVD 350
            L +    VD
Sbjct: 562 VLKENPSIVD 571



 Score = 45.8 bits (107), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 27/189 (14%)

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           L +A  ++ +M+     P V+ +S +   + N       + LF EM  L       +   
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSIL-- 100

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-----------------K 590
           NI+ N+ C +  I  +  +L   +  G   ++VT N  L  L                 +
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVR 160

Query: 591 EKLEAPQD---GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           EK+  P +   GT  +N L+    KR  T     ++ +M Q    P   T+  V+  LC+
Sbjct: 161 EKICEPNEVMYGT-VMNGLS----KRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCK 215

Query: 648 PKRIQAAIN 656
              + AAIN
Sbjct: 216 DINLDAAIN 224


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/396 (33%), Positives = 202/396 (51%), Gaps = 21/396 (5%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           NT  F+   + +C +G  + A Q+ +EM  +   PD  TY  ++  LC+  +++++ LL 
Sbjct: 419 NTANFS---RCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLF 475

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+  G  P   T+ +LI+  CK G + +A    D M   GC PN VTY  L+H     
Sbjct: 476 QEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKS 535

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM------EERKFH 364
             L +A  +  RMV + C PN VTY  +I+GL K G       V   +       E  F+
Sbjct: 536 KQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFY 595

Query: 365 V----------NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
                      N   Y  LI GL K  K  DA +L   M+  GC+PN +VY ALIDG C+
Sbjct: 596 FEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCK 655

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +GK D A+E+   M   G   +  TY+SL+   F+ G+   A+++  +M  ++C  N V 
Sbjct: 656 IGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVT 715

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ +I GL + G++ +A  + + M  +GC P+VV Y+++I GL   G  + +LKLF +M 
Sbjct: 716 YTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQM- 774

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
                  P+  TY +L+N  C    +  +  LL+ M
Sbjct: 775 -NSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809



 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 163/601 (27%), Positives = 270/601 (44%), Gaps = 96/601 (15%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF-IFIFKAYGKAHLVE-EAIRLF 141
           S F SL+  Y N+GD+     +  RM          ++ IFI    G+  L   E + L 
Sbjct: 342 SLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLV 401

Query: 142 HTMVDEFHCKRTVKSFNSVLNV---IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
             + +E      V +  +  N    +   G + +A +    ++       +P+T T+  V
Sbjct: 402 EKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRK---GFVPDTSTYTKV 458

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG- 257
           I  +C+   V+ +  LF+EM      PD+YTY  L+D  CK   +++A    DEM+  G 
Sbjct: 459 ITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGC 518

Query: 258 ----------------------------------CFPTPVTFNVLINGLCKNGELGRAAK 283
                                             C+P  VT++ LI+GLCK GE+ +A +
Sbjct: 519 SPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACE 578

Query: 284 LVD-----------NMFLKG-----CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           + +           + + +G       PN VTY  LI GLC    +  A  LLD M+A+ 
Sbjct: 579 VYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAG 638

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C PN++ Y  +I+G  K+G+  +   V + M +  +  + + Y++LI  +FK+G+ + AM
Sbjct: 639 CEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAM 698

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           K+  +M+   C PN V Y+A+IDGL +VG+ ++A  +L  M   GC+ N  TY++L+ G 
Sbjct: 699 KVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGL 758

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV--------WT--- 496
            ++GK   +++++K M    C  N V Y VLI+  C  G L EA ++        W    
Sbjct: 759 GKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHL 818

Query: 497 ----------------------QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
                                 +M S    P    Y  +I     AG +E AL+L  E++
Sbjct: 819 QGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELV 878

Query: 535 CLEPK-SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
            +    +      Y  L+ ALC  S +  +  L   M  +G  PDL+   +F++ +K  +
Sbjct: 879 EVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLI---VFVSLVKGLI 935

Query: 594 E 594
           E
Sbjct: 936 E 936



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 238/498 (47%), Gaps = 56/498 (11%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           ST+  +I     +   +   ++   M+R        ++  +  ++ KA L+E+A   F  
Sbjct: 453 STYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDE 512

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M     C   V ++ ++L+  ++     +A + ++ +V+A      PN +T++ +I  +C
Sbjct: 513 M-RSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAA---CYPNAVTYSALIDGLC 568

Query: 204 RLGLVDNAIQLFREM--PVRNCEPDIY--------------TYCTLMDGLCKENRLDEAV 247
           + G +  A +++ ++     N E D Y              TY  L+DGLCK  ++ +A 
Sbjct: 569 KAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAH 628

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LLD M   GC P  + ++ LI+G CK G++  A ++   M   G LP+  TY +LI  +
Sbjct: 629 ELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRM 688

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
              G LD A+ +L  M+   C PN VTY  +I+GL K+G       +L  MEE+    N 
Sbjct: 689 FKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNV 748

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ LI GL K GKA+ ++KL+KQM  KGC PN V Y  LI+  C  G  DEA  +L E
Sbjct: 749 VTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDE 808

Query: 428 MINN---------GCAANAFT------------------------YSSLMKGFFESGKGH 454
           M +           CA   F+                        Y  L+  F ++G+  
Sbjct: 809 MKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLE 868

Query: 455 KAVEIWKDMAKNNCVYNEVC---YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
            A+E+ K++ + +   N      Y+ LI  LC   ++ EA  ++T+M  +G  PD++ + 
Sbjct: 869 TALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFV 928

Query: 512 SMIHGLCNAGSVEEALKL 529
           S++ GL      +EAL+L
Sbjct: 929 SLVKGLIEVNKWDEALQL 946



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/520 (24%), Positives = 216/520 (41%), Gaps = 103/520 (19%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +T+    +I  +    L + A+     M   +C P++ TY TL+ G  K+ +      ++
Sbjct: 270 DTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRII 329

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           + M  +GC P P  FN L++G C  G+   A KL + M   G  P  V YN  I  +C +
Sbjct: 330 NMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQ 389

Query: 311 -----------------------------------------GNLDKAVSLLDRMVASKCM 329
                                                    G  +KA  +L  M+    +
Sbjct: 390 EELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFV 449

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+  TY  +I  L +  +      +   M+    + + Y Y+ LI    K G  E A   
Sbjct: 450 PDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSW 509

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + +M   GC PN V Y+AL+    +  +  +A +I   M++  C  NA TYS+L+ G  +
Sbjct: 510 FDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCK 569

Query: 450 SGKGHKAVEIWKDM--------------AKNNCVY--NEVCYSVLIHGLCEDGKLREARM 493
           +G+  KA E+++ +                + C    N V Y  LI GLC+  K+ +A  
Sbjct: 570 AGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHE 629

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA--------------------------- 526
           +   ML+ GC+P+ + Y ++I G C  G ++ A                           
Sbjct: 630 LLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689

Query: 527 --------LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
                   +K+ +EML       P+V TY  +++ L K   I  +++LL+ M ++GC P+
Sbjct: 690 KDGRLDLAMKVLSEML--NDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPN 747

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           +VT    +  L +  +A         + +++LFK+  + G
Sbjct: 748 VVTYTALIDGLGKTGKA---------DASLKLFKQMNSKG 778



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 124/570 (21%), Positives = 242/570 (42%), Gaps = 79/570 (13%)

Query: 160 VLNVIIQ----EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +LNV+++     GL+  ALE    +   K     P+ +T+N +++ +   G V+   ++ 
Sbjct: 171 LLNVLVRRCCRHGLWDEALEELGRL---KDFGYRPSAVTYNALVQVLASAGQVEMGFRVQ 227

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           +EM       D  T       LCK  R  +A+ +L++   +      V    +I+GL + 
Sbjct: 228 KEMSASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFN---LDTVLCTQMISGLMEA 284

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
                A   +  M    C+PN VTY TL+ G   K        +++ M+   C PN   +
Sbjct: 285 SLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLF 344

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM------KL 389
            ++++G    G      ++   M           Y+  I  +  + +  +A       K+
Sbjct: 345 NSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKV 404

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +++M+   C  N V  +     LC VGK ++A +IL EM+  G   +  TY+ ++    +
Sbjct: 405 YEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQ 464

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           + K  K+  ++++M +     +   Y++LI   C+ G + +AR  + +M S GC P+VV 
Sbjct: 465 AKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVT 524

Query: 510 YSSMIH-----------------------------------GLCNAGSVEEALKLFNEML 534
           Y++++H                                   GLC AG +++A +++ +++
Sbjct: 525 YTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLI 584

Query: 535 CLEPKSQ--------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
                 +              P+V TY  L++ LCK   +S + +LL++M+  GC+P+ +
Sbjct: 585 GTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQI 644

Query: 581 TCNIFLTALKE--KLEAPQD------------GTDFLNELAIRLFKRQRTSGGFKIVEVM 626
             +  +    +  K++  Q+                   L  R+FK  R     K++  M
Sbjct: 645 VYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEM 704

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           L    +P   T+  ++  L +   I+ A+N
Sbjct: 705 LNDSCNPNVVTYTAMIDGLSKVGEIEKALN 734



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 161/339 (47%), Gaps = 40/339 (11%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  V +A  L   M+    C+     ++++++   + G    A E +  +    +   L
Sbjct: 620 KAQKVSDAHELLDAMLAA-GCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGY---L 675

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  T+  +I  + + G +D A+++  EM   +C P++ TY  ++DGL K   +++A+ L
Sbjct: 676 PSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNL 735

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M+  GC P  VT+  LI+GL K G+   + KL   M  KGC PN VTY  LI+  C 
Sbjct: 736 LSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCA 795

Query: 310 KGNLDKAVSLLDRM-----------------------VAS----------KCMPNEVTYG 336
            G LD+A  LLD M                       +AS          + +P    YG
Sbjct: 796 AGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYG 855

Query: 337 TIINGLVKLGR---AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            +I+   K GR   A++  + L+ +       +  +Y++LI  L    + E+A  L+ +M
Sbjct: 856 MLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEM 915

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
             KG  P+ +V+ +L+ GL  V K DEA ++ +   + G
Sbjct: 916 TRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEG 954



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/338 (23%), Positives = 146/338 (43%), Gaps = 61/338 (18%)

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R+L  + E    V   + + L+    + G  ++A++   ++ + G +P+ V Y+AL+  L
Sbjct: 155 RLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVL 214

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTY-------------------------------- 440
              G+ +    +  EM  +G   +  T                                 
Sbjct: 215 ASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLC 274

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  E+   ++A+     M  N+C+ N V Y  L+ G  +  +    + +   M++
Sbjct: 275 TQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMT 334

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM-LCLEPKSQPDVFTYNILLNALCKQSN 559
            GC P+   ++S++HG CNAG    A KLFN M  C  P   P    YNI + ++C Q  
Sbjct: 335 EGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSP---PGYVAYNIFIGSICGQEE 391

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR-----Q 614
           + ++ +LL          DLV         +E L A    +  LN++    F R      
Sbjct: 392 LPNA-ELL----------DLVE-----KVYEEMLAA----SCVLNKVNTANFSRCLCGVG 431

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           +    F+I++ M++K   P TST+ +V+  LC+ K+++
Sbjct: 432 KFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVE 469


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 233/419 (55%), Gaps = 5/419 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           + N+++  +  +G   +AL F++ ++ A+   +  N +++  +I  VC++G    AI+L 
Sbjct: 379 TLNTLIKGLCLKGQVKKALHFHDKLL-AQGFQL--NQVSYATLINGVCKIGDTRGAIKLL 435

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R++  R  +P++  Y T++D LCK   + EA  L  EM V G     VT++ LI G C  
Sbjct: 436 RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIV 495

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A  L++ M LK   P+  TY  L+  L  +G + +A S+L  M+ +   P+  TY
Sbjct: 496 GKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTY 555

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T++NG + +        V  +M       + + Y+ LI+G  K    ++A+ L+K+M +
Sbjct: 556 NTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQ 615

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P+TV YS+L+DGLC+ G+     +++ EM + G  A+  TY+SL+ G  ++G   K
Sbjct: 616 KNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDK 675

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ ++  M       N   +++L+ GLC+ G+L++A+ V+  +L++G   DV  Y+ MI+
Sbjct: 676 AIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIY 735

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           G C  G +EEAL + ++M   E    P+  T++I++NAL K+     +  LL  M+ RG
Sbjct: 736 GHCKQGLLEEALTMLSKM--EENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARG 792



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 156/573 (27%), Positives = 260/573 (45%), Gaps = 120/573 (20%)

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGL------YHRALEFY---------NHIVNAKH 185
           ++ +VD    +  VK   SVL V+++  +      Y   ++ Y          H+ NA  
Sbjct: 206 YNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMS 265

Query: 186 -MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
            M + P+  ++N++I   C++  VD A+ LF+EM +    P I  +  ++D   K     
Sbjct: 266 LMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYS 324

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            AV L   +++ G  P   T N+LIN  C  G++     ++  +  +G  P+ VT NTLI
Sbjct: 325 TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLI 384

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLCLKG + KA+   D+++A     N+V+Y T+ING+ K+G      ++L  ++ R   
Sbjct: 385 KGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTK 444

Query: 365 VNEYIYSTLIS------------GLFKE-----------------------GKAEDAMKL 389
            N  +YST+I             GLF E                       GK ++A+ L
Sbjct: 445 PNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGL 504

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF-- 447
             +M+ K   P+   Y+ L+D L + GK  EA+ +L  M+      + FTY++LM G+  
Sbjct: 505 LNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLL 564

Query: 448 -FESGKGH--------------------------------KAVEIWKDMAKNNCVYNEVC 474
            +E  K                                  +A+ ++K+M + N V + V 
Sbjct: 565 VYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVT 624

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM- 533
           YS L+ GLC+ G++     +  +M  RG   DV+ Y+S+I GLC  G +++A+ LFN+M 
Sbjct: 625 YSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMK 684

Query: 534 -----------------LC---------------LEPKSQPDVFTYNILLNALCKQSNIS 561
                            LC               L      DV+ YN+++   CKQ  + 
Sbjct: 685 DQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLE 744

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            ++ +L+ M + GC P+ VT +I + AL +K E
Sbjct: 745 EALTMLSKMEENGCIPNAVTFDIIINALFKKDE 777



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 173/668 (25%), Positives = 286/668 (42%), Gaps = 101/668 (15%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
           +G  K    F D++         +QL   ++ +LI      GD ++    L ++      
Sbjct: 76  KGQVKEALHFHDKLLAQ-----GFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAK 130

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
              + +  I  A  K  LV EA  LF  M  +      V ++++++      G    AL 
Sbjct: 131 PNVEMYNTIIDALCKYQLVSEAYGLFSEMTVK-GISANVVTYSTLIYGFCIVGKLKEALG 189

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
             N +V  K +N  PN  T+N+++  +C+ G V  A  +   M     + ++ TY TLMD
Sbjct: 190 LLNVMV-LKTIN--PNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMD 246

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF------ 289
           G      + +A  + + M + G  P   ++N++ING CK   + +A  L   M       
Sbjct: 247 GYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306

Query: 290 ----------------------------LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
                                       LKG  P+  T N LI+  C  G +    S+L 
Sbjct: 307 IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLA 366

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +++     P+ VT  T+I GL   G+          +  + F +N+  Y+TLI+G+ K G
Sbjct: 367 KILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIG 426

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
               A+KL +++  +  KPN  +YS +ID LC+     EA  +  EM   G +A+  TYS
Sbjct: 427 DTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYS 486

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ GF   GK  +A+ +  +M       +   Y++L+  L ++GK++EA+ V   ML  
Sbjct: 487 TLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKA 546

Query: 502 GCKPDVVAYSS-----------------------------------MIHGLCNAGSVEEA 526
             KPDV  Y++                                   +I+G C +  V+EA
Sbjct: 547 CVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEA 606

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L LF EM   +    PD  TY+ L++ LCK   IS+  DL++ M DRG   D++T N  +
Sbjct: 607 LNLFKEM--HQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLI 664

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
             L +     +         AI LF + +  G            + P T T+  ++  LC
Sbjct: 665 DGLCKNGHLDK---------AIALFNKMKDQG------------IRPNTFTFTILLDGLC 703

Query: 647 RPKRIQAA 654
           +  R++ A
Sbjct: 704 KGGRLKDA 711



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/538 (24%), Positives = 245/538 (45%), Gaps = 66/538 (12%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVN--AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           S+ +++N + + G    A++F   I    AK     PN   +N +I  +C+  LV  A  
Sbjct: 100 SYATLINGVCRIGDTRAAIKFLRKIDGRLAK-----PNVEMYNTIIDALCKYQLVSEAYG 154

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           LF EM V+    ++ TY TL+ G C   +L EA+ LL+ M +    P   T+N+L++ LC
Sbjct: 155 LFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALC 214

Query: 274 KNG-----------------------------------ELGRAAKLVDNMFLKGCLPNEV 298
           K G                                   E+ +A  + + M L G  P+  
Sbjct: 215 KEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 274

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           +YN +I+G C    +DKA++L   M+ S+  P  + +  I++   K+        +   +
Sbjct: 275 SYNIMINGFCKIKRVDKALNLFKEMILSR-FPPIIQFNKILDSFAKMKHYSTAVSLSHRL 333

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E +    + +  + LI+     G+      +  +++++G  P+TV  + LI GLC  G+ 
Sbjct: 334 ELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQV 393

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            +A     +++  G   N  +Y++L+ G  + G    A+++ + +       N   YS +
Sbjct: 394 KKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTI 453

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I  LC+   + EA  ++++M  +G   DVV YS++I+G C  G ++EA+ L NEM+    
Sbjct: 454 IDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVL--K 511

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PDV TY IL++AL K+  +  +  +L  M+     PD+ T N  +            
Sbjct: 512 TINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY--------- 562

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                    + +++ ++    F  + +M    ++P   T+  ++   C+ K +  A+N
Sbjct: 563 ---------LLVYEVKKAQHVFNAMSLM---GVTPDVHTYTILINGFCKSKMVDEALN 608



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 202/431 (46%), Gaps = 25/431 (5%)

Query: 243 LDEAVLL--LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +D+AV L  L ++   G  P  VT N LI GLC  G++  A    D +  +G   N+V+Y
Sbjct: 42  VDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSY 101

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
            TLI+G+C  G+   A+  L ++      PN   Y TII+ L K     +   +   M  
Sbjct: 102 ATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTV 161

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    N   YSTLI G    GK ++A+ L   M+ K   PN   Y+ L+D LC+ GK  E
Sbjct: 162 KGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKE 221

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A+ +L  M+     +N  TYS+LM G+F   +  KA  ++  M+      +   Y+++I+
Sbjct: 222 AKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMIN 281

Query: 481 GLCEDGKLREARMVWTQM-LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           G C+  ++ +A  ++ +M LSR   P ++ ++ ++           A+ L +    LE K
Sbjct: 282 GFCKIKRVDKALNLFKEMILSRF--PPIIQFNKILDSFAKMKHYSTAVSLSHR---LELK 336

Query: 540 S-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
             QPD+FT NIL+N  C    I+    +L  ++ RG  P  VT N  +  L  K +  + 
Sbjct: 337 GIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQV-KK 395

Query: 599 GTDFLNELAIRLFKRQRTS---------------GGFKIVEVMLQKFLSPQTSTWERVVQ 643
              F ++L  + F+  + S               G  K++  +  +   P    +  ++ 
Sbjct: 396 ALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIID 455

Query: 644 ELCRPKRIQAA 654
            LC+ + +  A
Sbjct: 456 ALCKYQLVSEA 466



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 127/501 (25%), Positives = 232/501 (46%), Gaps = 58/501 (11%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T+T N +IK +C  G V  A+    ++  +  + +  +Y TL++G+C+      A+  
Sbjct: 61  PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L ++      P    +N +I+ LCK   +  A  L   M +KG   N VTY+TLI+G C+
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L +A+ LL+ MV     PN  TY  +++ L K G+  +   VL  M +     N   
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YSTL+ G F   + + A  ++  M   G  P+   Y+ +I+G C++ + D+A  +  EMI
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300

Query: 430 NN----------------------------------GCAANAFTYSSLMKGFFESGKGHK 455
            +                                  G   + FT + L+  F   G+   
Sbjct: 301 LSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITF 360

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
              +   + K     + V  + LI GLC  G++++A     ++L++G + + V+Y+++I+
Sbjct: 361 GFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLIN 420

Query: 516 GLCNAGSVEEALKLFNEMLCLEPK-SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           G+C  G    A+KL  +   ++ + ++P+V  Y+ +++ALCK   +S +  L + M  +G
Sbjct: 421 GVCKIGDTRGAIKLLRK---IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG 477

Query: 575 CDPDLVTCN--IFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTS 617
              D+VT +  I+   +  KL   ++    LNE+ ++               L K  +  
Sbjct: 478 ISADVVTYSTLIYGFCIVGKL---KEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVK 534

Query: 618 GGFKIVEVMLQKFLSPQTSTW 638
               ++ VML+  + P   T+
Sbjct: 535 EAKSVLAVMLKACVKPDVFTY 555



 Score = 92.4 bits (228), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 85/141 (60%), Gaps = 3/141 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++NS+++ + + G   +A+  +N +   K   I PNT TF +++  +C+ G + +A +
Sbjct: 657 VITYNSLIDGLCKNGHLDKAIALFNKM---KDQGIRPNTFTFTILLDGLCKGGRLKDAQE 713

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F+++  +    D+Y Y  ++ G CK+  L+EA+ +L +M+ +GC P  VTF+++IN L 
Sbjct: 714 VFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALF 773

Query: 274 KNGELGRAAKLVDNMFLKGCL 294
           K  E  +A KL+  M  +G L
Sbjct: 774 KKDENDKAEKLLRQMIARGLL 794


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/575 (27%), Positives = 277/575 (48%), Gaps = 27/575 (4%)

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV-DEFHCKRTVKSFNS 159
           +++++L RM     V    S+  + K     +  ++A+ L   M  +E  C   V ++N+
Sbjct: 62  AVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNT 121

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           V++   +EG   +A   Y+ ++       +P+ +T N +I  +C+   VDNA  L R+M 
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMM---QQGFVPDVVTHNSIINALCKARAVDNAELLLRQMV 178

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                P+  TY +++ G     R +EA  +  EM   G  P  V++N  ++ LCK+G   
Sbjct: 179 DNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSK 238

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            AA++  +M  KG  PN VTY  L+HG   +G     +S  + M     + N + +  +I
Sbjct: 239 EAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILI 298

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +   K G   +   +L  M+ +    + + YSTLIS L + G+  DA+  + QM+  G +
Sbjct: 299 DAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQ 358

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA-ANAFTYSSLMKGFFESGK---GHK 455
           PNTVVY +LI G C  G   +A+E+++EM+NNG    N   ++S++    + G+    H 
Sbjct: 359 PNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHH 418

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
             ++ KD+ + + +   + ++ LI G C  G++ +A  V   M+S G  PD   Y+++++
Sbjct: 419 IFDLVKDIGERSDI---IMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVN 475

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G   +G +++ L LF EM   + K +P   TYNI+L+ L +      +  +L+ M+  G 
Sbjct: 476 GYFKSGRIDDGLNLFREM--SDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGT 533

Query: 576 DPDLVTCNIFLTAL------KEKLEAPQD--------GTDFLNELAIRLFKRQRTSGGFK 621
              L T NI L  L       E +   Q             LN +   ++  QR      
Sbjct: 534 TVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKD 593

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +   +    L P  ST+  +++ L +   ++ A N
Sbjct: 594 LFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADN 628



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 228/491 (46%), Gaps = 57/491 (11%)

Query: 220 VRNCEPDIYTYCTLMDGLCKE-----------------------------------NRLD 244
           +R   P I+TY  +M+G C+                                     R D
Sbjct: 1   MRVAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTD 60

Query: 245 EAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYN 301
           +AV +LL  M   GC P   ++ +++  LC +    +A  L+  M  +   C P+ VTYN
Sbjct: 61  DAVKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYN 120

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEE 360
           T+IHG   +G + KA +L   M+    +P+ VT+ +IIN L K  RAVD A +L+  M +
Sbjct: 121 TVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCK-ARAVDNAELLLRQMVD 179

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                N+  Y+++I G    G+ E+A K++++M  +G  P+ V +++ +D LC+ G+  E
Sbjct: 180 NGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKE 239

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A EI + M   G   N  TY  L+ G+   G     +  +  M  +  V N + +++LI 
Sbjct: 240 AAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILID 299

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
              + G + EA ++ ++M  +G  PDV  YS++I  LC  G + +A+  FN+M  +    
Sbjct: 300 AYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQM--IGTGV 357

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD-PDLVTCNIFLTAL--KEKLEAPQ 597
           QP+   Y+ L+   C   ++  + +L+  MM+ G   P++   N  + ++  + ++    
Sbjct: 358 QPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAH 417

Query: 598 DGTDFLNELAIR----LFKR--------QRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
              D + ++  R    +F                F +++ M+   + P T T+  +V   
Sbjct: 418 HIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGY 477

Query: 646 CRPKRIQAAIN 656
            +  RI   +N
Sbjct: 478 FKSGRIDDGLN 488



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 223/481 (46%), Gaps = 46/481 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ S+I  Y+  G ++    +   M        +V   SF+     +G++   +EA  +F
Sbjct: 188 TYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRS---KEAAEIF 244

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           ++M  + H +  + ++  +L+    EG +   + F+N +   K   I+ N L F ++I  
Sbjct: 245 YSMAAKGH-RPNIVTYGILLHGYATEGCFADMMSFFNTM---KGDGIVANCLVFTILIDA 300

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G++D A+ +  EM  +   PD++TY TL+  LC+  RL +AV   ++M   G  P 
Sbjct: 301 YAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPN 360

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-LPNE----------------------- 297
            V ++ LI G C +G+L +A +LV  M   G   PN                        
Sbjct: 361 TVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420

Query: 298 ------------VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
                       + +NTLI G CL G + KA S+LD M+++   P+  TY T++NG  K 
Sbjct: 421 DLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKS 480

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           GR  DG  +   M ++K       Y+ ++ GLF+ G+   A K+  +M+  G   +   Y
Sbjct: 481 GRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTY 540

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + ++ GLCR    DEA  +  ++       N  T ++++   +   +  +A +++  ++ 
Sbjct: 541 NIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSAISD 600

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
           +  V N   Y ++I  L ++G + EA  +++ M   GC P     +  I  L   G + +
Sbjct: 601 SGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVK 660

Query: 526 A 526
           A
Sbjct: 661 A 661



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 160/346 (46%), Gaps = 21/346 (6%)

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK- 388
           P   TYG ++NG  +  R   G      +       ++   +T++  L    + +DA+K 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG--CAANAFTYSSLMKG 446
           L ++M E GC P+   Y+ ++  LC   +  +A ++L  M      C+ +  TY++++ G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           FF+ GK  KA  ++ +M +   V + V ++ +I+ LC+   +  A ++  QM+  G  P+
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            V Y+SMIHG    G  EEA K+F EM        PD+ ++N  +++LCK      + ++
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMT--GRGLIPDIVSWNSFMDSLCKHGRSKEAAEI 243

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE---------------LAIRLF 611
             SM  +G  P++VT  I L     +     D   F N                L     
Sbjct: 244 FYSMAAKGHRPNIVTYGILLHGYATE-GCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
           KR        I+  M  + LSP   T+  ++  LCR  R+  A++K
Sbjct: 303 KRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDK 348


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/467 (30%), Positives = 244/467 (52%), Gaps = 6/467 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I K  G+  +V +A+ +F+  V    C+ T  ++NSV+ +++QEG + +  E YN + + 
Sbjct: 166 IVKILGRVKMVNKALSIFYQ-VKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSE 224

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
            H    P+T+T++ +I    +L   D+A++LF EM     +P    Y TLM    K  ++
Sbjct: 225 GH--CFPDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKV 282

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA+ L+ EM++  C PT  T+  LI GL K+G +  A  +  NM   GC P+ V  N L
Sbjct: 283 EEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNL 342

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK-LGRAVDGARVLMSMEERK 362
           I+ L     L +AV L + M    C PN VTY TII  L +      + +  L  M++  
Sbjct: 343 INILGRSDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDG 402

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              + + YS LI G  K  + E A+ L ++M EKG  P    Y +LI+ L +  + + A 
Sbjct: 403 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAAN 462

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           E+  E+  N  +++   Y+ ++K F + G+ ++A+ ++ +M K  C+ +   Y+ LI G+
Sbjct: 463 ELFQELKENCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGM 522

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
                + EA  ++  M   GC PD+ +++ +++GL   G  + A+++F +M     K  P
Sbjct: 523 VRADMMDEAFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIK--P 580

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           D  +YN +L  L +      +  L+  M  +G + DL+T +  L A+
Sbjct: 581 DAVSYNTVLGCLSRAGLFEEATKLMKEMNSKGFEYDLITYSSILEAV 627



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 191/442 (43%), Gaps = 76/442 (17%)

Query: 221 RNCEPDIYTYCTLMDGLCKENRL-DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
           RN E D  TY  L+  L  ENRL  E    + +M    C   P   + ++  L +   + 
Sbjct: 119 RNFEHDSTTYMALIRCL-DENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVN 177

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA-SKCMPNEVTYGTI 338
           +A  +   +  + C P   TYN++I  L  +G+ +K   L + M +   C P+ VTY  +
Sbjct: 178 KALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSAL 237

Query: 339 INGLVKLGRAVDGARVLMSMEERKFH-------------------------VNE------ 367
           I+   KL R     R+   M+E                             V+E      
Sbjct: 238 ISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRC 297

Query: 368 ----YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
               Y Y+ LI GL K G+ EDA  ++K M++ GCKP+ V+ + LI+ L R  +  EA E
Sbjct: 298 VPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVE 357

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW-KDMAKNNCVYNEVCYSVLIHGL 482
           +  EM    C  N  TY++++K  FE          W + M K+  V +   YS+LI G 
Sbjct: 358 LFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGF 417

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL-------------------CNAGSV 523
           C+  ++ +A ++  +M  +G  P   AY S+I+ L                   C + SV
Sbjct: 418 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSV 477

Query: 524 E----------------EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
                            EA+ LFNEM  L     PDV+ YN L+  + +   +  +  L 
Sbjct: 478 RVYAVMIKHFGKCGRFNEAMGLFNEMKKL--GCIPDVYAYNALITGMVRADMMDEAFSLF 535

Query: 568 NSMMDRGCDPDLVTCNIFLTAL 589
            +M + GC+PD+ + NI L  L
Sbjct: 536 RTMEENGCNPDINSHNIILNGL 557



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 18/285 (6%)

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLM 444
           A+ ++ Q+  + C+P    Y+++I  L + G  ++  E+  EM + G C  +  TYS+L+
Sbjct: 179 ALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALI 238

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             F +  +   AV ++ +M +N        Y+ L+    + GK+ EA  +  +M  R C 
Sbjct: 239 SAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCV 298

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P V  Y+ +I GL  +G VE+A  ++  ML  +   +PDV   N L+N L +   +  ++
Sbjct: 299 PTVYTYTELIRGLGKSGRVEDAYGVYKNML--KDGCKPDVVLMNNLINILGRSDRLKEAV 356

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA--------------IRL 610
           +L   M    C P++VT N  + +L E    P + + +L  +               I  
Sbjct: 357 ELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDG 416

Query: 611 F-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           F K  R      ++E M +K   P  + +  ++  L + KR +AA
Sbjct: 417 FCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAA 461


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 256/506 (50%), Gaps = 6/506 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
            T+ ++ +  +  G  + +  VL +MR+   V+   S+  +     ++    EA+ ++  
Sbjct: 158 DTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRR 217

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV E   K ++K++++++  + ++      +     +   + + + PN  TF + I+ + 
Sbjct: 218 MVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKEM---EDLGLRPNVYTFTICIRVLG 273

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G +D A ++FR M    C PD+ TY  L+D LC   +L+ A  L  +M+ +G  P  V
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +  L++     G+L    +    M   G +P+ VT+  L+  LC   + D+A +  D M
Sbjct: 334 IYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                +PN  TY T+I GL++ GR  D  ++L +ME        Y Y+  I    K G+ 
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGET 453

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A++ +++M  KG  PN V  +A +  L  +G+  EA+ +   +  NG A ++ TY+ +
Sbjct: 454 GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           MK + + G+  +AV +  +M +N C  + +  + LI  L + G++ EA  ++ +M     
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P VV Y++++ GL   G V++A++LF  M  +E K  P+  ++N LL+  CK   +  +
Sbjct: 574 SPTVVTYNTLLSGLGKEGRVQKAIELFESM--IEKKCSPNTISFNTLLDCFCKNDEVELA 631

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + + + M    C PD++T N  +  L
Sbjct: 632 LKMFSKMTVMDCKPDVLTYNTVIYGL 657



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 265/548 (48%), Gaps = 51/548 (9%)

Query: 83   DSTFYSLIQH-YANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAI 138
            DS  Y+++   Y+  G       +L  M R   E  V++  S I    +  KA  V+EA 
Sbjct: 506  DSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI---DSLYKAGRVDEAW 562

Query: 139  RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
            ++F  M D      TV ++N++L+ + +EG   +A+E +  ++  K     PNT++FN +
Sbjct: 563  QMFDRMKD-MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK---CSPNTISFNTL 618

Query: 199  IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
            +   C+   V+ A+++F +M V +C+PD+ TY T++ GL KEN+++ A     +++    
Sbjct: 619  LDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSM 677

Query: 259  FPTPVTFNVLINGLCKNGELGRAAKLV-DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  VT   L+ GL K G++G A  +  D M+      N   +  L+ G  ++  +DKA+
Sbjct: 678  HPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAI 737

Query: 318  ---------------SLLDRMVASKCM---------------------PNEVTYGTIING 341
                           S L  +V   C                      P   +Y  +I  
Sbjct: 738  IFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGE 797

Query: 342  LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
            L+++        +   M+      + + ++ L++   K GK  +  +L+K+M+ + CKP+
Sbjct: 798  LLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPD 857

Query: 402  TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
             + Y+ +I  L +    D+A +  ++++++       TY  L+ G  + G+  +A+ +++
Sbjct: 858  AITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFE 917

Query: 462  DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            +M+   C  N   +++LI+G  + G    A  ++ +M++ G +PD+ +Y+ ++  LC AG
Sbjct: 918  EMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAG 977

Query: 522  SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
             V+EAL  FNE+        PD   YN ++N L K   +  ++ L N M +RG  PDL T
Sbjct: 978  RVDEALYYFNELK--STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYT 1035

Query: 582  CNIFLTAL 589
             N  +  L
Sbjct: 1036 YNSLMLNL 1043



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 220/465 (47%), Gaps = 23/465 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  ++N +I  + + G    A++++R M     +P + TY  LM  L K+   +  ++LL
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+  G  P   TF + I  L + G++  A ++   M  +GC P+ VTY  LI  LC  
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G L+ A  L  +M A+   P++V Y T+++     G           ME   +  +   +
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + L+  L K    ++A   +  M ++G  PN   Y+ LI GL R G+ ++A ++L  M +
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G    A+TY+  +  F +SG+  KAVE ++ M     V N V  +  ++ L E G+LRE
Sbjct: 431 VGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A+ ++  +   G  PD V Y+ M+      G V+EA+ L +EM+      +PDV   N L
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI--RNGCEPDVIVVNSL 548

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +++L K   +  +  + + M D    P +VT N  L+ L                     
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLG-------------------- 588

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            K  R     ++ E M++K  SP T ++  ++   C+   ++ A+
Sbjct: 589 -KEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELAL 632



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 141/569 (24%), Positives = 258/569 (45%), Gaps = 85/569 (14%)

Query: 88   SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
            SLI     +G       +  RM+  K      ++  +    GK   V++AI LF +M+++
Sbjct: 547  SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEK 606

Query: 148  FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
              C     SFN++L+   +      AL+ ++ +     M+  P+ LT+N VI  + +   
Sbjct: 607  -KCSPNTISFNTLLDCFCKNDEVELALKMFSKMT---VMDCKPDVLTYNTVIYGLIKENK 662

Query: 208  VDNAIQLFREMPVRNCEPDIYTYCT----------------------------------- 232
            V++A   F ++  ++  PD  T CT                                   
Sbjct: 663  VNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721

Query: 233  -LMDGLCKENRLDEAVLLLDEMQVDGC--------------------------------- 258
             LM G   E  +D+A++  +E+ ++G                                  
Sbjct: 722  DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781

Query: 259  ---FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
                PT  ++N LI  L +     +A  L  +M   GC P+  T+N L+      G + +
Sbjct: 782  LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841

Query: 316  AVSLLDRMVASKCMPNEVTYGTIINGLVK---LGRAVDGARVLMSMEERKFHVNEYIYST 372
               L   M++ +C P+ +TY  +I+ L K   L +A+D    L+S +   F      Y  
Sbjct: 842  LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD---FRPTPRTYGP 898

Query: 373  LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
            LI GL K G+ E+AM+L+++M + GCKPN  +++ LI+G  ++G  + A ++   M+N G
Sbjct: 899  LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958

Query: 433  CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
               +  +Y+ L+     +G+  +A+  + ++       + + Y+ +I+GL +  ++ EA 
Sbjct: 959  IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018

Query: 493  MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
             ++ +M +RG  PD+  Y+S++  L  AG VE+A +++ E+       +PDVFTYN L+ 
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL--AGLEPDVFTYNALIR 1076

Query: 553  ALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
                  N  H+  +  +MM  GC+P++ T
Sbjct: 1077 GYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 163/709 (22%), Positives = 290/709 (40%), Gaps = 148/709 (20%)

Query: 97  GDFKSLEMVLYRMRREKRVVLEK---SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRT 153
           G  +  EMV+  ++  + + L     +F    +  G+A  ++EA  +F  M DE  C   
Sbjct: 238 GKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDE-GCGPD 296

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM--------------------------- 186
           + ++  +++ +   G    A E +  +    H                            
Sbjct: 297 LVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWS 356

Query: 187 -----NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
                  +P+ +TF +++  +C+    D A   F  M  +   P+++TY TL+ GL +  
Sbjct: 357 QMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAG 416

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN----- 296
           R+++A+ LL  M+  G  PT  T+N+ I+   K+GE G+A +  + M  KG +PN     
Sbjct: 417 RIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACN 476

Query: 297 ------------------------------EVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
                                          VTYN ++      G +D+AV+LL  M+ +
Sbjct: 477 ASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRN 536

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
            C P+ +   ++I+ L K GR  +  ++   M++ K       Y+TL+SGL KEG+ + A
Sbjct: 537 GCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKA 596

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS---- 442
           ++L++ M+EK C PNT+ ++ L+D  C+  + + A ++  +M    C  +  TY++    
Sbjct: 597 IELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYG 656

Query: 443 ------------------------------LMKGFFESGKGHKAVEI------------- 459
                                         L+ G  + G+   A+ I             
Sbjct: 657 LIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVN 716

Query: 460 ---WKDMAKNNCVYNEVCYSVL------IHGLC-EDGKL-----------RE--ARMVWT 496
              W+D+     V  E+  +++      ++G+C ED  L           RE  A  ++ 
Sbjct: 717 RSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFD 776

Query: 497 QMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
           +   + G  P + +Y+ +I  L      E+A  LF +M  +     PD FT+N+LL    
Sbjct: 777 KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV--GCAPDAFTFNMLLAVHG 834

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           K   I+   +L   M+ R C PD +T NI +++L  K        DF  +L    F+   
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLA-KSNNLDKALDFFYDLVSSDFRPTP 893

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLYG 664
            + G  I  +     L      +E +    C+P     AI     N YG
Sbjct: 894 RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP---NCAIFNILINGYG 939



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 182/356 (51%), Gaps = 3/356 (0%)

Query: 198  VIKTVCRLGLVDNAIQLFREMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +++ +C+      A Q+F +   +    P + +Y  L+  L + +  ++A  L  +M+  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 257  GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            GC P   TFN+L+    K+G++    +L   M  + C P+ +TYN +I  L    NLDKA
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877

Query: 317  VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
            +     +V+S   P   TYG +I+GL K+GR  +  R+   M +     N  I++ LI+G
Sbjct: 878  LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937

Query: 377  LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
              K G  E A +L+K+M+ +G +P+   Y+ L+D LC  G+ DEA     E+ + G   +
Sbjct: 938  YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997

Query: 437  AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
               Y+ ++ G  +S +  +A+ ++ +M     V +   Y+ L+  L   G + +A+ ++ 
Sbjct: 998  FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057

Query: 497  QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++   G +PDV  Y+++I G   + + E A  ++  M+       P++ TY  L N
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMV--DGCNPNIGTYAQLPN 1111



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 169/342 (49%), Gaps = 3/342 (0%)

Query: 137  AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
            A ++F     +     T+ S+N ++  +++     +A + +  +   K++   P+  TFN
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM---KNVGCAPDAFTFN 827

Query: 197  LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +++    + G +    +L++EM  R C+PD  TY  ++  L K N LD+A+    ++   
Sbjct: 828  MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 257  GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
               PTP T+  LI+GL K G L  A +L + M   GC PN   +N LI+G    G+ + A
Sbjct: 888  DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947

Query: 317  VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
              L  RMV     P+  +Y  +++ L   GR  +       ++      +   Y+ +I+G
Sbjct: 948  CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007

Query: 377  LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
            L K  + E+A+ L+ +M  +G  P+   Y++L+  L   G  ++A+ +  E+   G   +
Sbjct: 1008 LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067

Query: 437  AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             FTY++L++G+  S     A  ++K+M  + C  N   Y+ L
Sbjct: 1068 VFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 153/331 (46%)

Query: 183  AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
             K + I P   ++N +I  +  +   + A  LF++M    C PD +T+  L+    K  +
Sbjct: 779  TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGK 838

Query: 243  LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            + E   L  EM    C P  +T+N++I+ L K+  L +A     ++      P   TY  
Sbjct: 839  ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898

Query: 303  LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
            LI GL   G L++A+ L + M    C PN   +  +ING  K+G      ++   M    
Sbjct: 899  LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958

Query: 363  FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
               +   Y+ L+  L   G+ ++A+  + ++   G  P+ + Y+ +I+GL +  + +EA 
Sbjct: 959  IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018

Query: 423  EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
             +  EM N G   + +TY+SLM     +G   +A  +++++       +   Y+ LI G 
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078

Query: 483  CEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
                    A  V+  M+  GC P++  Y+ +
Sbjct: 1079 SLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 4/217 (1%)

Query: 124  IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
            +     K   +EEA+RLF  M D + CK     FN ++N   + G    A + +  +VN 
Sbjct: 899  LIDGLAKVGRLEEAMRLFEEMSD-YGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE 957

Query: 184  KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                I P+  ++ +++  +C  G VD A+  F E+     +PD   Y  +++GL K  R+
Sbjct: 958  ---GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 244  DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +EA+ L +EM+  G  P   T+N L+  L   G + +A ++ + + L G  P+  TYN L
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074

Query: 304  IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
            I G  L  N + A ++   M+   C PN  TY  + N
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/399 (33%), Positives = 207/399 (51%), Gaps = 2/399 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N + +++VI  +CR G VD   + + EM      P+ +TY +L+ GLC   +  E   L+
Sbjct: 184 NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLV 243

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM   G   +   F VLI+GLCKNG L  A ++ D M  +G  PN VT   L+ G CLK
Sbjct: 244 DEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLK 303

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           GN+D A  L D +       +  TY   I+G  K+GR  D  RV   M       N   Y
Sbjct: 304 GNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTY 363

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           ++LI  L K G+   A ++ K M   G  P+ V    L+DGLC+  + D+A  +  +++ 
Sbjct: 364 NSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVE 423

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +G   + ++Y+ L+ G   S +  +A+ + +DM   N V + V YS LI GLC  G++  
Sbjct: 424 SGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISN 483

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +M  +G  PD + YS ++  L     ++EA+ LFN+M+  +   +PDV  Y I+
Sbjct: 484 AWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMI--KRGLEPDVMCYTIM 541

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           ++  CK   I  +I+L   M  +   PD+VT  I   A+
Sbjct: 542 IDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAV 580



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 144/539 (26%), Positives = 257/539 (47%), Gaps = 36/539 (6%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC- 203
           ++ FH   ++  FN  L  +++   +  A+  +N        N         L I   C 
Sbjct: 27  INSFHSHSSLAHFNKHLTCLMKTNQHSTAIALFNQ----NEYNNFITPCIITLTIIITCF 82

Query: 204 -RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
             LG V  +  +F ++  R    D     T++ GLC    + +A+   DE+  +G     
Sbjct: 83  FHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNE 142

Query: 263 VTFNVLINGLCKNGELGRAAKLV-----------DNMFLKGCLPNEVTYNTLIHGLCLKG 311
           V++ +LINGLC+NG +  A  L+           D  F+KG   N V Y+ +I  LC  G
Sbjct: 143 VSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCRNG 199

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            +D+     + M+ +   PNE TYG++I GL  +G+ ++G  ++  M  R   V+ Y+++
Sbjct: 200 FVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFT 259

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI GL K G   +A +++ +M+ +G +PN V  +AL+ G C  G  D A E+   +   
Sbjct: 260 VLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEW 319

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   + +TY+  + G+ + G+   AV ++ +M +   V N V Y+ LI  LC+ G++  A
Sbjct: 320 GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGA 379

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +   M   G  PD+V    ++ GLC +  +++A+ LFN++  +E    PDV++Y IL+
Sbjct: 380 WEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQL--VESGLTPDVWSYTILI 437

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--------------KEKLEAPQ 597
           +  C    +  +++LL  M  +   P +VT +  +  L              +  ++ P 
Sbjct: 438 HGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPL 497

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             T   + L   L+K+Q       +   M+++ L P    +  ++   C+ +RI  AIN
Sbjct: 498 PDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAIN 556



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 218/463 (47%), Gaps = 15/463 (3%)

Query: 134 VEEAIRLFHTMV-------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           V EA+ L   +        D F  K  V  ++ V++ + + G      EFYN ++     
Sbjct: 158 VNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGN--- 214

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            + PN  T+  +I+ +C +G       L  EM  R  +  +Y +  L+DGLCK   L EA
Sbjct: 215 GVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEA 274

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             + DEM   G  P  VT   L+ G C  G +  A +L D +   G   +  TYN  IHG
Sbjct: 275 REMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHG 334

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C  G +  AV + D M     +PN VTY ++I+ L K G       ++ +M       +
Sbjct: 335 YCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPD 394

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
                 L+ GL K  + + A+ L+ Q++E G  P+   Y+ LI G C   +  EA  +L 
Sbjct: 395 IVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLR 454

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +M       +  TYS L+ G   SG+   A  +  +M     + + + YS+L+  L +  
Sbjct: 455 DMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQ 514

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            L EA  ++ QM+ RG +PDV+ Y+ MI G C +  ++EA+ LF EM        PD+ T
Sbjct: 515 HLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM--HMKNLVPDIVT 572

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           Y IL NA+ K  + S+    +N + D    P ++    +L AL
Sbjct: 573 YTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLK---YLAAL 612


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 266/527 (50%), Gaps = 22/527 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++ AI  F+ M+       TV  FN +L  I +   +H  L   +H +++    I PN  
Sbjct: 42  IDGAISSFNRMLRMQPPPSTV-DFNKLLTSIAKMK-HHSTLLSLSHQMDS--FGIPPNIY 97

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T +++I + C L  V  A  +  ++     +PD  T+ TL+ G+  E ++ EA+ L D+M
Sbjct: 98  TLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKM 157

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  VT+  LINGLCK G    A +L+ +M  K C PN   YNT+I  LC    +
Sbjct: 158 IGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQV 217

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +L   MV     P+  TY ++I+ L  L      A +L  M + K   +   ++T+
Sbjct: 218 TEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTV 277

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEGK  +A  +  +M+++G +PN V Y+AL+DG C + + DEA ++   M+  GC
Sbjct: 278 VDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGC 337

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  +Y++L+ G+ +  +  KA+ ++ +M +   + + V YS LIHGLC   +L++A  
Sbjct: 338 MPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIA 397

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
           ++ +M++    P++V Y  ++  LC    + EA+ L      +E  +  PD+   NI ++
Sbjct: 398 LFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLK---AIEGSNLDPDIQVNNIAID 454

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--------KEKL--EAPQDGTDF 602
            +C+   +  + DL +++  +G  PD+ T +I +  L          KL  E  ++G   
Sbjct: 455 GMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTL 514

Query: 603 ----LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
                N +     +   TS   ++++ M+ +  S   ST    V+ L
Sbjct: 515 NGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 561



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 190/363 (52%), Gaps = 4/363 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  +  K   V EA  LF  MV +      + ++NS+++ +     +       N +V++
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTK-GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I+P+ ++FN V+  +C+ G V  A  +  +M  R  EP++ TY  LMDG C  + +
Sbjct: 266 K---IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEAV + D M   GC P  +++N LING CK   + +A  L   M  +  +P+ VTY+TL
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           IHGLC    L  A++L   MVA   +PN VTY  +++ L K     +   +L ++E    
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +  + +  I G+ + G+ E A  L+  +  KG +P+   YS +I+GLCR G  DEA +
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 502

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EM  NGC  N   Y+++ +GF  + +  +A+++ ++M       +    ++ +  L 
Sbjct: 503 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 562

Query: 484 EDG 486
           +DG
Sbjct: 563 DDG 565



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 224/464 (48%), Gaps = 6/464 (1%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           F+  +     KLG +Q   +TF +LI+     G       +  +M  E       ++  +
Sbjct: 114 FAFSVLAKILKLG-HQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTL 172

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
                K      AIRL  +MV + +C+  V ++N++++ + ++     A   ++ +V   
Sbjct: 173 INGLCKVGNTSAAIRLLGSMVQK-NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK- 230

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              I P+  T+N +I  +C L    +   L  EM      PD+ ++ T++D LCKE ++ 
Sbjct: 231 --GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 288

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  ++D+M   G  P  VT+  L++G C   E+  A K+ D M  KGC+PN ++YNTLI
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLI 348

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +G C    +DKA+ L   M   + +P+ VTY T+I+GL  + R  D   +   M      
Sbjct: 349 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 408

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            N   Y  L+  L K     +AM L K +      P+  V +  IDG+CR G+ + A ++
Sbjct: 409 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 468

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              + + G   + +TYS ++ G    G   +A +++++M +N C  N   Y+ +  G   
Sbjct: 469 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 528

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           + +   A  +  +M++RG   D    +  +  L + G ++++LK
Sbjct: 529 NNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG-LDQSLK 571



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 179/368 (48%), Gaps = 38/368 (10%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +D A+S  +RM+  +  P+ V +  ++  + K+        +   M+      N Y    
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI+      +   A  +  ++++ G +P+T  ++ LI G+   GK  EA  +  +MI  G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              +  TY +L+ G  + G    A+ +   M + NC  N   Y+ +I  LC+D ++ EA 
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++++M+++G  PD+  Y+S+IH LCN    +    L NEM+  + K  PDV ++N +++
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV--DSKIMPDVVSFNTVVD 279

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL--AIRL 610
           ALCK+  ++ + D+++ M+ RG +P++VT     TAL        DG   L+E+  A+++
Sbjct: 280 ALCKEGKVTEAHDVVDKMIQRGVEPNVVT----YTAL-------MDGHCLLSEMDEAVKV 328

Query: 611 F-----------------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           F                       K QR      +   M ++ L P T T+  ++  LC 
Sbjct: 329 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 388

Query: 648 PKRIQAAI 655
            +R+Q AI
Sbjct: 389 VERLQDAI 396



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 162/313 (51%), Gaps = 5/313 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V SFN+V++ + +EG    A +  + ++      + PN +T+  ++   C L  +D A++
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQR---GVEPNVVTYTALMDGHCLLSEMDEAVK 327

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F  M  + C P++ +Y TL++G CK  R+D+A+ L  EM      P  VT++ LI+GLC
Sbjct: 328 VFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLC 387

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
               L  A  L   M     +PN VTY  L+  LC    L +A++LL  +  S   P+  
Sbjct: 388 HVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQ 447

Query: 334 TYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
                I+G+ + G  ++ AR L S +  +    + + YS +I+GL + G  ++A KL+++
Sbjct: 448 VNNIAIDGMCRAGE-LEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFRE 506

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M E GC  N  +Y+ +  G  R  +   A ++L EM+  G +A+A T +  +K   + G 
Sbjct: 507 MDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGL 566

Query: 453 GHKAVEIWKDMAK 465
                +I ++  +
Sbjct: 567 DQSLKQILREFVQ 579



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/160 (22%), Positives = 65/160 (40%), Gaps = 23/160 (14%)

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           QM S G  P++     +I+  C+   V  A  +  ++L L    QPD  T+  L+  +  
Sbjct: 86  QMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL--GHQPDTATFTTLIRGIYV 143

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
           +  I  ++ L + M+  G  PD+VT    +  L                      K   T
Sbjct: 144 EGKIGEALHLFDKMIGEGFRPDVVTYGTLINGL---------------------CKVGNT 182

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           S   +++  M+QK   P    +  ++  LC+ +++  A N
Sbjct: 183 SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 256/500 (51%), Gaps = 28/500 (5%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F++++NV  +E     A   YN ++      I+P+ + ++++I  + R G ++    LF
Sbjct: 277 TFSTLINVYCKELRLDEAFSLYNLMIEK---GIVPDLVIYSILINGLFRAGKLEEGNSLF 333

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                R  + D+  + ++MD   +   L +A+ +   M  +G  P  VT+++LINGLC+N
Sbjct: 334 SMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRN 393

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G +  A  +   +  +G  P+ +TY++LI G C   NL     L   M+    +P+ V  
Sbjct: 394 GRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVC 453

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +INGL + G   +  R      +R   +N Y+++ LI G F+  +  D +K++  M  
Sbjct: 454 SMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGM 513

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
               P+ V Y+ L+ GL   G+ DEA  + F+++  G + +   Y +L+ GF +      
Sbjct: 514 YKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPAT 573

Query: 456 AVEIWKDMAKNNCVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            ++I+K M ++N ++ ++C Y+VLI+    +G +     +  +++  G +PD+V Y++MI
Sbjct: 574 GLQIFKLM-QSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G C+     +A+KLF  + C   ++QP+  T+ IL++A CK   +  ++ + +SM++RG
Sbjct: 633 CGYCSLKIFSKAIKLFEVLKC--GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG 690

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
            +P+++T +  +           DG           FK + T   F++ E ML   +SP 
Sbjct: 691 PEPNILTYSCLI-----------DGY----------FKTENTESAFELYEKMLGDRVSPN 729

Query: 635 TSTWERVVQELCRPKRIQAA 654
             ++  ++  LC+   ++ A
Sbjct: 730 IVSYSILIDGLCKKGLMEEA 749



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 236/499 (47%), Gaps = 26/499 (5%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +  V N  ++ G   + L F+  +V      ++P  +  N ++K +C    +  A   F 
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALVER---GLVPKIVDCNKILKGLCMGNQIGVASDFFD 264

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M      P++ T+ TL++  CKE RLDEA  L + M   G  P  V +++LINGL + G
Sbjct: 265 MMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAG 324

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +L     L      +G   + V +++++      G+L KA+ +  RM+     PN VTY 
Sbjct: 325 KLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYS 384

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +INGL + GR ++   V   + ++    +   YS+LI G  K     D   L+  M+ K
Sbjct: 385 ILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRK 444

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+ VV S LI+GL R G  DEA    F+ +  G   N + +++L+ G F   +    
Sbjct: 445 GHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDG 504

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           ++++  M     + + V Y+VL+ GL E G+L EA  ++ Q+L +G  PD + Y ++I G
Sbjct: 505 LKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDG 564

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C        L++F  M        PD+  YN+L+N   ++  + + ++LL  ++  G +
Sbjct: 565 FCKKRDPATGLQIFKLM--QSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           PD+VT N  +                    ++++F +       K+ EV+      P   
Sbjct: 623 PDIVTYNTMICGY----------------CSLKIFSK-----AIKLFEVLKCGRTQPNAI 661

Query: 637 TWERVVQELCRPKRIQAAI 655
           T+  ++   C+  R+  A+
Sbjct: 662 TFTILIDAYCKDGRMDDAM 680



 Score =  199 bits (505), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 244/503 (48%), Gaps = 8/503 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS-FIFIFKAYGKAHLVEEAIRLFHT 143
           TF +LI  Y            LY +  EK +V +   +  +     +A  +EE   LF +
Sbjct: 277 TFSTLINVYCKELRLDE-AFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLF-S 334

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M      K  V  F+S+++  ++ G   +A+E Y  ++      I PN +T++++I  +C
Sbjct: 335 MALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKE---GISPNVVTYSILINGLC 391

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G V  A  +F ++  +  EP + TY +L+DG CK   L +   L   M   G  P  V
Sbjct: 392 RNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVV 451

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
             ++LINGL + G +  A +       +G   N   +N LI G          + +   M
Sbjct: 452 VCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILM 511

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              K +P+ VTY  ++ GL + GR  +   +   + ++ F  +  IY TLI G  K+   
Sbjct: 512 GMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDP 571

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
              ++++K M   G  P+  +Y+ LI+   R G  +   E+L E+I  G   +  TY+++
Sbjct: 572 ATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTM 631

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G+       KA+++++ +       N + +++LI   C+DG++ +A ++++ ML RG 
Sbjct: 632 ICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGP 691

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +P+++ YS +I G     + E A +L+ +ML    +  P++ +Y+IL++ LCK+  +  +
Sbjct: 692 EPNILTYSCLIDGYFKTENTESAFELYEKML--GDRVSPNIVSYSILIDGLCKKGLMEEA 749

Query: 564 IDLLNSMMDRGCDPDLVTCNIFL 586
                  + R   PD++   I +
Sbjct: 750 SLAFQCAIGRHLLPDVIAYGILI 772



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/530 (24%), Positives = 234/530 (44%), Gaps = 82/530 (15%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA-KHMNIL----- 189
            A+R F    +       V+SF  + +V+++  ++  A   ++ +V    ++ +L     
Sbjct: 71  SALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHG 130

Query: 190 --------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
                   P+T+ ++ ++   CR G+VD A+  F  M         Y    ++D L   +
Sbjct: 131 SFRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSD 189

Query: 242 RLDEAVLLLDEM------------------QVD------------GCFPTPVTFNVLING 271
           R+D  +   +EM                  +V+            G  P  V  N ++ G
Sbjct: 190 RIDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LC   ++G A+   D M   G  PN VT++TLI+  C +  LD+A SL + M+    +P+
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            V Y  +INGL + G+  +G  +      R   ++  I+S+++    + G    A++++ 
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYT 369

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M+++G  PN V YS LI+GLCR G+  EA  +  +++  G   +  TYSSL+ GF +S 
Sbjct: 370 RMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK------- 504
                  ++  M +   V + V  S+LI+GL   G + EA   + Q + RG         
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFN 489

Query: 505 ----------------------------PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
                                       PDVV Y+ ++ GL   G ++EAL LF ++  L
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQL--L 547

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +    PD   Y  L++  CK+ + +  + +   M   G  PD+   N+ +
Sbjct: 548 KKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 188/427 (44%), Gaps = 49/427 (11%)

Query: 85  TFYSLIQHYANSGDFK---SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ SLI  +  S + +    L  ++ R      VV+    I       +  +++EA+R F
Sbjct: 417 TYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI---NGLSRQGMMDEALRFF 473

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYH--RALEFYNHIVNAKHMNILPNTLTFNLVI 199
              V     KR +   N + N +I +G +   R  +     +      ++P+ +T+ +++
Sbjct: 474 FQAV-----KRGLTLNNYLFNALI-DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLV 527

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           K +   G +D A+ LF ++  +   PD   YCTL+DG CK+      + +   MQ +G F
Sbjct: 528 KGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF 587

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P    +NVLIN   + G +    +L+  +   G  P+ VTYNT+I G C      KA+ L
Sbjct: 588 PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKL 647

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            + +   +  PN +T+  +I+   K GR  D   +  SM ER    N   YS LI G FK
Sbjct: 648 FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFK 707

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
               E A +L+++M+     PN V YS LIDGLC+ G  +EA       I      +   
Sbjct: 708 TENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIA 767

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y  L++G+                                   C+ G+L EA M++  ML
Sbjct: 768 YGILIRGY-----------------------------------CKVGRLAEAMMLYDHML 792

Query: 500 SRGCKPD 506
             G  PD
Sbjct: 793 VNGIMPD 799



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 184/415 (44%), Gaps = 61/415 (14%)

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+ V Y+ L+H  C  G +D+AV     M       +      +++ L+   R +D 
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDR-ID- 192

Query: 352 ARVLMSMEE--RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
             +L + EE  +   V E+++++ +    K G+ E  +   + ++E+G  P  V  + ++
Sbjct: 193 -VILENYEEMCKGLGVYEFVFNSFL----KRGEVEKGLNFHRALVERGLVPKIVDCNKIL 247

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   +   A +    M+ +G + N  T+S+L+  + +  +  +A  ++  M +   V
Sbjct: 248 KGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIV 307

Query: 470 YNEVCYSVLIHGLCEDGKLRE-----------------------------------ARMV 494
            + V YS+LI+GL   GKL E                                   A  V
Sbjct: 308 PDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEV 367

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           +T+ML  G  P+VV YS +I+GLC  G V EA  +F ++  L+   +P V TY+ L++  
Sbjct: 368 YTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI--LKQGLEPSVLTYSSLIDGF 425

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK----------LEAPQDGTD--- 601
           CK  N+     L   M+ +G  PD+V C++ +  L  +           +A + G     
Sbjct: 426 CKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNN 485

Query: 602 -FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              N L    F+ +RT  G K+  +M    + P   T+  +V+ L    R+  A+
Sbjct: 486 YLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEAL 540



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 111/222 (50%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I P+   +N++I    R G V+N ++L RE+     EPDI TY T++ G C      +A
Sbjct: 585 GIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKA 644

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L + ++     P  +TF +LI+  CK+G +  A  +  +M  +G  PN +TY+ LI G
Sbjct: 645 IKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
                N + A  L ++M+  +  PN V+Y  +I+GL K G   + +        R    +
Sbjct: 705 YFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPD 764

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
              Y  LI G  K G+  +AM L+  M+  G  P+ ++  AL
Sbjct: 765 VIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 165/616 (26%), Positives = 293/616 (47%), Gaps = 60/616 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  LI     S  F     +  +M ++     E +   + +   +A LV++A+ L +  
Sbjct: 152 TFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQALELVNNN 211

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                  R V  +N++++   +E + + A      +     + +LP+ +TFN  I  +CR
Sbjct: 212 NSCRIANRVV--YNTLVSRFCREEMNNEAERLVERM---NELGVLPDVVTFNSRISALCR 266

Query: 205 LGLVDNAIQLFREMPVRN----CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            G V  A ++FR+M +        P++ T+  ++ G CK   + +A  L++ M+  G F 
Sbjct: 267 AGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFD 326

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +   +N+ + GL +NGEL  A  ++D M  KG  PN  TYN ++ GLC    L  A  L+
Sbjct: 327 SLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLM 386

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D M+ +   P+ V Y T+++G    G+  +   VL  M       N Y  +TL+  L+KE
Sbjct: 387 DLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKE 446

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-------- 432
           G+  +A ++ ++M EK  +P+TV  + +++GLCR G+ D+A EI+ EM  NG        
Sbjct: 447 GRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGN 506

Query: 433 --------------CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
                         C  +  TY++L+ G  + G+  +A + + +M   N   + V Y   
Sbjct: 507 SFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTF 566

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I   C+ GK+  A  V   M   GC   +  Y+++I GL +   + E   L +EM   E 
Sbjct: 567 IWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEM--KEK 624

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PD+ TYN ++  LC+      +I LL+ M+D+G  P++ +  I + A  +       
Sbjct: 625 GISPDICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKS------ 678

Query: 599 GTDF-----LNELAIRLFKRQRT----------SGGF-----KIVEVMLQKFLSPQTSTW 638
            +DF     L E+A+ +  R+            +GG      ++ EV L ++L+ +   +
Sbjct: 679 -SDFKVACELFEVALNICGRKEALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMY 737

Query: 639 ERVVQELCRPKRIQAA 654
           + ++  LC+ +R+  A
Sbjct: 738 KDLIARLCQDERLADA 753



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 163/605 (26%), Positives = 276/605 (45%), Gaps = 93/605 (15%)

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           +   S I + +   +   V++AI  F ++  +F    ++     + N++++  L H    
Sbjct: 76  IAHPSLISMVRVLAQLGHVDDAITHFKSLRAQFP---SLSPSLPLYNLLLRSTLRHHRPG 132

Query: 176 F----YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYT-- 229
           F    Y+ ++ A+   + P T TFNL+I ++C     D+A+QLF +MP + C P+ +T  
Sbjct: 133 FVSWLYSDMLAAR---VAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLG 189

Query: 230 --------------------------------YCTLMDGLCKENRLDEAVLLLDEMQVDG 257
                                           Y TL+   C+E   +EA  L++ M   G
Sbjct: 190 ILVRGLCRAGLVKQALELVNNNNSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELG 249

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL----PNEVTYNTLIHGLCLKGNL 313
             P  VTFN  I+ LC+ G++  A+++  +M +   L    PN VT+N ++ G C  G +
Sbjct: 250 VLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMM 309

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A  L++ M       +   Y   + GL++ G  ++   VL  M  +    N Y Y+ +
Sbjct: 310 GDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIM 369

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL +     DA  L   MM  G  P+TV YS L+ G C  GK  EA+ +L EMI NGC
Sbjct: 370 MDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGC 429

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N +T ++L+   ++ G+  +A E+ + M +     + V  +++++GLC +G+L +A  
Sbjct: 430 QPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASE 489

Query: 494 VWTQMLSRG----------------------CKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
           + ++M + G                      C PD + Y+++I+GLC  G +EEA K F 
Sbjct: 490 IVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFI 549

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           EML      +PD  TY+  + + CKQ  IS +  +L  M   GC   L T N  +  L  
Sbjct: 550 EMLA--KNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGS 607

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                       N     ++       G K  + M +K +SP   T+  ++  LC   + 
Sbjct: 608 ------------NNQIFEIY-------GLK--DEMKEKGISPDICTYNNIITCLCEGGKA 646

Query: 652 QAAIN 656
           + AI+
Sbjct: 647 KDAIS 651



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 155/604 (25%), Positives = 266/604 (44%), Gaps = 105/604 (17%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI-LPNTLT 194
           EA RL   M +E      V +FNS ++ + + G    A   +  +     + +  PN +T
Sbjct: 237 EAERLVERM-NELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVT 295

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           FNL++K  C+ G++ +A  L   M        +  Y   + GL +   L EA L+LDEM 
Sbjct: 296 FNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMV 355

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P   T+N++++GLC+N  L  A  L+D M   G  P+ V Y+TL+HG C +G + 
Sbjct: 356 AKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVF 415

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A S+L  M+ + C PN  T  T+++ L K GR ++   +L  M E+ +  +    + ++
Sbjct: 416 EAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVV 475

Query: 375 SGLFKEGKAEDAMKLWKQMMEKG----------------------CKPNTVVYSALIDGL 412
           +GL + G+ + A ++  +M   G                      C P+ + Y+ LI+GL
Sbjct: 476 NGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGL 535

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC---- 468
           C+VG+ +EA++   EM+      ++ TY + +  F + GK   A  + KDM +N C    
Sbjct: 536 CKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTL 595

Query: 469 -VYN-----------------------------EVC-YSVLIHGLCEDGKLREARMVWTQ 497
             YN                             ++C Y+ +I  LCE GK ++A  +  +
Sbjct: 596 QTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHE 655

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF------------------NEMLC---- 535
           ML +G  P+V ++  +I     +   + A +LF                  NE+L     
Sbjct: 656 MLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGRKEALYSLMFNELLAGGQL 715

Query: 536 LEPKSQPDV----------FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            E K   +V          F Y  L+  LC+   ++ +  LL  ++D+G   D  +    
Sbjct: 716 SEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPV 775

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKRQ-------RTSGGFKIVEVMLQKFLSPQTSTW 638
           +  L ++    Q      +ELA R+ + +       RT    K   V+  K L    S W
Sbjct: 776 IDGLSKRGNKRQ-----ADELAKRMMELELEDRPVDRTYSNRK--RVIPGKLLKDGGSDW 828

Query: 639 ERVV 642
           + ++
Sbjct: 829 QDII 832


>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
 gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
          Length = 498

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 147/464 (31%), Positives = 240/464 (51%), Gaps = 19/464 (4%)

Query: 77  GSYQLGDS----TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL--EKSFIFIFKAYGK 130
           G Y  G S    T++S+I   + +  F  +E +L ++ R    +   +  FI + + YG 
Sbjct: 39  GKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGL 98

Query: 131 AHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH-MNIL 189
           A     A++ F  + +EF  + +VK  N++LNV +Q   YH      + + N K    +L
Sbjct: 99  AGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLV---GSTLKNCKDKYGVL 155

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  +FN++IK +C+   V+NA+++F EMP     P++ TY T++ G      L  A  +
Sbjct: 156 PNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKV 215

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             E+   G  P   T+ VL+ G CK G L  A K++DNM   G  PNEVTY  +I   C 
Sbjct: 216 FSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCK 275

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +    +A +L+D M+  K +P+      +I+ L + G+  +   +   M E+    +  I
Sbjct: 276 EKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAI 335

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            STLI  L KEGK  +A KL+ +  E+G  P+ + Y+ LI G+C  G+ +EA  +  +M+
Sbjct: 336 MSTLIHWLCKEGKVWEARKLFDE-FEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMV 394

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
              C  NAFTY+ L+KGF ++G   + V I ++M  N C+ N+  Y++LI GL E G   
Sbjct: 395 EKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEG 454

Query: 490 EARMVWT-QMLSRGCKPDVVAYSSMIHGL-----CNAGSVEEAL 527
           +   V +  M SR    D  ++   +H +     C  G+++  L
Sbjct: 455 DVDKVMSMAMASREVDAD--SWDLFLHKIVGNLDCGTGALDRLL 496



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 175/333 (52%), Gaps = 4/333 (1%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVS 318
           P+    N L+N   +N         + N   K G LPN  ++N LI  LC K +++ A+ 
Sbjct: 120 PSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALK 179

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           + D M     +PN VTY TI+ G V  G  V+  +V   + ++ +  +   Y+ L+ G  
Sbjct: 180 VFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYC 239

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K+G+  DA+K+   M   G +PN V Y  +ID  C+  K  EA  ++ +M++     ++ 
Sbjct: 240 KQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSST 299

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
               ++    E GK   A  +WK M + NC+ +    S LIH LC++GK+ EAR ++ + 
Sbjct: 300 LCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDE- 358

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
             +G  P ++ Y+++I G+C  G + EA +L+++M+  E + +P+ FTYN+L+    K  
Sbjct: 359 FEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMV--EKRCRPNAFTYNMLIKGFMKAG 416

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            +   + +L  M+D GC P+  T  + +  L+E
Sbjct: 417 VVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQE 449


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 226/451 (50%), Gaps = 13/451 (2%)

Query: 145 VDEFH------CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           VD FH         +VK+ N++L  + + G      + ++ + + K   + PN  ++  +
Sbjct: 178 VDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCK--TVTPNGYSYTSM 235

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           IK +C++G VD+  ++  ++     +       Y  LMD LCK  R+DEA+ L   M+  
Sbjct: 236 IKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEES 295

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P+ VTF +LINGL ++   G    L+  M   G  PNEV  N LI   C KG+  +A
Sbjct: 296 RVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEA 355

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           + L D MV+ +     VTY  I   L K G      R+L  M      ++  +++++++G
Sbjct: 356 IRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAG 415

Query: 377 LF-KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           L  + G+ E  ++L  +M+++G KPN  + +A    LC+  +  EA  I  +M+  G   
Sbjct: 416 LLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCI 475

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  T ++L+ G  E      A E+ + M       + + Y+++I G C+D K+ EA  + 
Sbjct: 476 NIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLR 535

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M+ +G KPD   ++S+IH  C+ G +EEAL L  +M       QPDV +Y  +++  C
Sbjct: 536 DDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKI--EGVQPDVVSYGTIIDGYC 593

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           K  +I  + + LN +M  G  P+ V  N  +
Sbjct: 594 KAKDIQKANEYLNELMACGLKPNAVIYNALI 624



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 131/439 (29%), Positives = 218/439 (49%), Gaps = 12/439 (2%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K H  E AIRLF  MV +   K T  ++N +   + +EG   RA      +++   M I 
Sbjct: 349 KGHFTE-AIRLFDEMVSK-EMKSTAVTYNLIARALCKEGEMERAERILEEMLSTG-MTI- 404

Query: 190 PNTLTFNLVIKTVC-RLGLVDNAIQLFREMPVRNCEPD--IYTYCTLMDGLCKENRLDEA 246
            ++  FN V+  +  R G +++ ++L  EM  R  +P+  + T CT    LC+  R  EA
Sbjct: 405 -HSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACT--KQLCQGRRHQEA 461

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           V +  +M   G      T N LI+GLC+   +  A +++  M  KG   + +TYN +I G
Sbjct: 462 VGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQG 521

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C    +++A+ L D M+     P+   + +II+    LG+  +   +L  M+      +
Sbjct: 522 CCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPD 581

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y T+I G  K    + A +   ++M  G KPN V+Y+ALI G  R G    A  +L 
Sbjct: 582 VVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLD 641

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            M + G      TY SLM     +G   +A  +++   KN+     V Y+++I GLC+ G
Sbjct: 642 TMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIG 701

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ EA   + +M SR   P+ + Y+++++  C +G+ EEA KLF+EM  +     PD  +
Sbjct: 702 KMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEM--VSSGIVPDNVS 759

Query: 547 YNILLNALCKQSNISHSID 565
           YN L+    +  ++  +I+
Sbjct: 760 YNTLVTGFSQVDSLDKAIE 778



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 19/196 (9%)

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCK---PDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           + L+  L   G L     V+ +M  R CK   P+  +Y+SMI  LC  G V++  K+ ++
Sbjct: 197 NALLEALARTGNLGATCKVFDEM--RDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSD 254

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           ++    +       YN+L++ALCK   +  +I L   M +    P +VT  I +  LK  
Sbjct: 255 LIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRS 314

Query: 593 LEAPQDGT--------------DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
               + G                  NEL     ++   +   ++ + M+ K +     T+
Sbjct: 315 DRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTY 374

Query: 639 ERVVQELCRPKRIQAA 654
             + + LC+   ++ A
Sbjct: 375 NLIARALCKEGEMERA 390


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/500 (26%), Positives = 256/500 (51%), Gaps = 28/500 (5%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F++++NV  +E     A   YN ++      I+P+ + ++++I  + R G ++    LF
Sbjct: 277 TFSTLINVYCKELRLDEAFSLYNLMIEK---GIVPDLVIYSILINGLFRAGKLEEGNSLF 333

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                R  + D+  + ++MD   +   L +A+ +   M  +G  P  VT+++LINGLC+N
Sbjct: 334 SMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRN 393

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G +  A  +   +  +G  P+ +TY++LI G C   NL     L   M+    +P+ V  
Sbjct: 394 GRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVC 453

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +INGL + G   +  R      +R   +N Y+++ LI G F+  +  D +K++  M  
Sbjct: 454 SMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGM 513

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
               P+ V Y+ L+ GL   G+ DEA  + F+++  G + +   Y +L+ GF +      
Sbjct: 514 YKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPAT 573

Query: 456 AVEIWKDMAKNNCVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            ++I+K M ++N ++ ++C Y+VLI+    +G +     +  +++  G +PD+V Y++MI
Sbjct: 574 GLQIFKLM-QSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G C+     +A+KLF  + C   ++QP+  T+ IL++A CK   +  ++ + +SM++RG
Sbjct: 633 CGYCSLKIFSKAIKLFEVLKC--GRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERG 690

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
            +P+++T +  +           DG           FK + T   F++ E ML   +SP 
Sbjct: 691 PEPNILTYSCLI-----------DG----------YFKTENTESAFELYEKMLGDRVSPN 729

Query: 635 TSTWERVVQELCRPKRIQAA 654
             ++  ++  LC+   ++ A
Sbjct: 730 IVSYSILIDGLCKKGLMEEA 749



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 236/499 (47%), Gaps = 26/499 (5%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +  V N  ++ G   + L F+  +V      ++P  +  N ++K +C    +  A   F 
Sbjct: 208 YEFVFNSFLKRGEVEKGLNFHRALV---ERGLVPKIVDCNKILKGLCMGNQIGVASDFFD 264

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M      P++ T+ TL++  CKE RLDEA  L + M   G  P  V +++LINGL + G
Sbjct: 265 MMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAG 324

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +L     L      +G   + V +++++      G+L KA+ +  RM+     PN VTY 
Sbjct: 325 KLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYS 384

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +INGL + GR ++   V   + ++    +   YS+LI G  K     D   L+  M+ K
Sbjct: 385 ILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRK 444

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+ VV S LI+GL R G  DEA    F+ +  G   N + +++L+ G F   +    
Sbjct: 445 GHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDG 504

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           ++++  M     + + V Y+VL+ GL E G+L EA  ++ Q+L +G  PD + Y ++I G
Sbjct: 505 LKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDG 564

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C        L++F  M        PD+  YN+L+N   ++  + + ++LL  ++  G +
Sbjct: 565 FCKKRDPATGLQIFKLM--QSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLE 622

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           PD+VT N  +                    ++++F +       K+ EV+      P   
Sbjct: 623 PDIVTYNTMICGY----------------CSLKIFSK-----AIKLFEVLKCGRTQPNAI 661

Query: 637 TWERVVQELCRPKRIQAAI 655
           T+  ++   C+  R+  A+
Sbjct: 662 TFTILIDAYCKDGRMDDAM 680



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 238/482 (49%), Gaps = 7/482 (1%)

Query: 106 LYRMRREKRVVLEKS-FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           LY +  EK +V +   +  +     +A  +EE   LF +M      K  V  F+S+++  
Sbjct: 297 LYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLF-SMALARGVKMDVVIFSSIMDAY 355

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
           ++ G   +A+E Y  ++      I PN +T++++I  +CR G V  A  +F ++  +  E
Sbjct: 356 VRVGDLGKAIEVYTRMLKE---GISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLE 412

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P + TY +L+DG CK   L +   L   M   G  P  V  ++LINGL + G +  A + 
Sbjct: 413 PSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRF 472

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
                 +G   N   +N LI G          + +   M   K +P+ VTY  ++ GL +
Sbjct: 473 FFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAE 532

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            GR  +   +   + ++ F  +  IY TLI G  K+      ++++K M   G  P+  +
Sbjct: 533 QGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICI 592

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ LI+   R G  +   E+L E+I  G   +  TY++++ G+       KA+++++ + 
Sbjct: 593 YNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLK 652

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
                 N + +++LI   C+DG++ +A ++++ ML RG +P+++ YS +I G     + E
Sbjct: 653 CGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTE 712

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
            A +L+ +ML    +  P++ +Y+IL++ LCK+  +  +       + R   PD++   I
Sbjct: 713 SAFELYEKML--GDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGI 770

Query: 585 FL 586
            +
Sbjct: 771 LI 772



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/529 (24%), Positives = 234/529 (44%), Gaps = 82/529 (15%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA-KHMNIL------ 189
           A+R F    +       V+SF  + +V+++  ++  A   ++ +V    ++ +L      
Sbjct: 72  ALRFFEWAENFLGLCHPVQSFCGIAHVLLRHRMFDPATRVFDRMVGQFGNLEVLGEFHGS 131

Query: 190 -------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
                  P+T+ ++ ++   CR G+VD A+  F  M         Y    ++D L   +R
Sbjct: 132 FRNYGSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDR 190

Query: 243 LDEAVLLLDEM------------------QVD------------GCFPTPVTFNVLINGL 272
           +D  +   +EM                  +V+            G  P  V  N ++ GL
Sbjct: 191 IDVILENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGL 250

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C   ++G A+   D M   G  PN VT++TLI+  C +  LD+A SL + M+    +P+ 
Sbjct: 251 CMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDL 310

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           V Y  +INGL + G+  +G  +      R   ++  I+S+++    + G    A++++ +
Sbjct: 311 VIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTR 370

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+++G  PN V YS LI+GLCR G+  EA  +  +++  G   +  TYSSL+ GF +S  
Sbjct: 371 MLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSEN 430

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK-------- 504
                 ++  M +   V + V  S+LI+GL   G + EA   + Q + RG          
Sbjct: 431 LRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNA 490

Query: 505 ---------------------------PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
                                      PDVV Y+ ++ GL   G ++EAL LF ++  L+
Sbjct: 491 LIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQL--LK 548

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
               PD   Y  L++  CK+ + +  + +   M   G  PD+   N+ +
Sbjct: 549 KGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLI 597



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 188/427 (44%), Gaps = 49/427 (11%)

Query: 85  TFYSLIQHYANSGDFK---SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ SLI  +  S + +    L  ++ R      VV+    I       +  +++EA+R F
Sbjct: 417 TYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLI---NGLSRQGMMDEALRFF 473

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYH--RALEFYNHIVNAKHMNILPNTLTFNLVI 199
              V     KR +   N + N +I +G +   R  +     +      ++P+ +T+ +++
Sbjct: 474 FQAV-----KRGLTLNNYLFNALI-DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLV 527

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           K +   G +D A+ LF ++  +   PD   YCTL+DG CK+      + +   MQ +G F
Sbjct: 528 KGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIF 587

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P    +NVLIN   + G +    +L+  +   G  P+ VTYNT+I G C      KA+ L
Sbjct: 588 PDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKL 647

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            + +   +  PN +T+  +I+   K GR  D   +  SM ER    N   YS LI G FK
Sbjct: 648 FEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFK 707

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
               E A +L+++M+     PN V YS LIDGLC+ G  +EA       I      +   
Sbjct: 708 TENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIA 767

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y  L++G+                                   C+ G+L EA M++  ML
Sbjct: 768 YGILIRGY-----------------------------------CKVGRLAEAMMLYDHML 792

Query: 500 SRGCKPD 506
             G  PD
Sbjct: 793 VNGIMPD 799



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 104/415 (25%), Positives = 184/415 (44%), Gaps = 61/415 (14%)

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+ V Y+ L+H  C  G +D+AV     M       +      +++ L+   R +D 
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDR-ID- 192

Query: 352 ARVLMSMEE--RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
             +L + EE  +   V E+++++ +    K G+ E  +   + ++E+G  P  V  + ++
Sbjct: 193 -VILENYEEMCKGLGVYEFVFNSFL----KRGEVEKGLNFHRALVERGLVPKIVDCNKIL 247

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC   +   A +    M+ +G + N  T+S+L+  + +  +  +A  ++  M +   V
Sbjct: 248 KGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIV 307

Query: 470 YNEVCYSVLIHGLCEDGKLRE-----------------------------------ARMV 494
            + V YS+LI+GL   GKL E                                   A  V
Sbjct: 308 PDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEV 367

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           +T+ML  G  P+VV YS +I+GLC  G V EA  +F ++  L+   +P V TY+ L++  
Sbjct: 368 YTRMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQI--LKQGLEPSVLTYSSLIDGF 425

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK----------LEAPQDGTD--- 601
           CK  N+     L   M+ +G  PD+V C++ +  L  +           +A + G     
Sbjct: 426 CKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNN 485

Query: 602 -FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              N L    F+ +RT  G K+  +M    + P   T+  +V+ L    R+  A+
Sbjct: 486 YLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEAL 540



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 111/222 (50%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I P+   +N++I    R G V+N ++L RE+     EPDI TY T++ G C      +A
Sbjct: 585 GIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKA 644

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L + ++     P  +TF +LI+  CK+G +  A  +  +M  +G  PN +TY+ LI G
Sbjct: 645 IKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDG 704

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
                N + A  L ++M+  +  PN V+Y  +I+GL K G   + +        R    +
Sbjct: 705 YFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPD 764

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
              Y  LI G  K G+  +AM L+  M+  G  P+ ++  AL
Sbjct: 765 VIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDDLLQKAL 806


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 258/499 (51%), Gaps = 14/499 (2%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
           QGN  S    +  +FN   + G +     T+  LI+   NSG+ +    +  +M+     
Sbjct: 378 QGNLDS----ALNLFNKITEDGLFP-NKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 432

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK-RTVKSFNSVLNVIIQEGLYHRAL 174
               +   + + Y KA L EEA +LF   VD   C    + ++N +++ + + G    A 
Sbjct: 433 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVD---CGVANIFTYNIMMSWLCKGGKMDEAC 489

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
              +++VN     ++PN +++N +I   CR G +D A  +F +M  R+ +P++ TY  L+
Sbjct: 490 SLLDNMVN---QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 546

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           DG  K+   ++A+ L D+M      PT  TFN +INGLCK G++  A   + N   +G +
Sbjct: 547 DGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFI 606

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+ +TYN+++ G   +GN+D A+++   M      PN VTY ++ING  K  R     + 
Sbjct: 607 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 666

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M E+   ++   YS LI G  K    E A  L+ +++E G  PN +VY+++I G   
Sbjct: 667 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRD 726

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +   + A     +MIN+    +  TY++L+ G  + G+   A +++ +M     V + + 
Sbjct: 727 LNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIIT 786

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           + VL++GLC  G+L  AR +  +M  +   P V+ Y+++I G    G+++EA  L +EM 
Sbjct: 787 FHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM- 845

Query: 535 CLEPKSQPDVFTYNILLNA 553
            L+    PD  TY+IL+N 
Sbjct: 846 -LDRGLVPDDVTYDILING 863



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 158/594 (26%), Positives = 285/594 (47%), Gaps = 26/594 (4%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           ++E F  T + G  +L    +  +IQ      +      +L  M+    V  E +F  + 
Sbjct: 279 AEEYFRETKERG-VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVI 337

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSF--NSVLNVIIQEGLYHRALEFYNHIVNA 183
            A      + EA+RL   M++   C + +      S++     +G    AL  +N I   
Sbjct: 338 VACVAQGNMVEALRLKEEMIN---CGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITED 394

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               + PN +T++++I+  C  G ++ A +L+ +M +    P ++   +L+ G  K    
Sbjct: 395 ---GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 451

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA  L DE  VD       T+N++++ LCK G++  A  L+DNM  +G +PN V+YN +
Sbjct: 452 EEASKLFDE-AVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 510

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C KGN+D A S+   M+A    PN VTY  +I+G  K G +     +   M     
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
              ++ ++T+I+GL K G+  +A    K  +E+G  P+ + Y++++DG  + G  D A  
Sbjct: 571 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 630

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EM   G + N  TY+SL+ GF +S +   A++   +M +     +   YS LI G C
Sbjct: 631 VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFC 690

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           +   +  A+ ++ ++L  G  P+ + Y+SMI G  +  ++E AL  + +M+    +   D
Sbjct: 691 KRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI--NDRIPCD 748

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTD 601
           + TY  L++ L K+  +  + DL   M+ +G  PD++T ++ +  L  K +LE  +   +
Sbjct: 749 LGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILE 808

Query: 602 ------------FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
                         N L    F+       F + + ML + L P   T++ ++ 
Sbjct: 809 EMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILIN 862



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/520 (25%), Positives = 238/520 (45%), Gaps = 50/520 (9%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRT---VKSFNSVLNVIIQEGLYHRALE 175
           + F ++  AY +A+ +E AI  F+ M+    C+     V   N +L  +++  +     +
Sbjct: 191 RVFNYLLNAYIRANRIENAIDCFNAMI----CQDVIPWVPYMNILLTALVRRNMIGELRD 246

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
            YN +V      I  +  T +++++   + G V+ A + FRE   R  + D   Y  ++ 
Sbjct: 247 LYNKMV---LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQ 303

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI-------------------------- 269
            +CK+   +  + LL+EM+  G  P+  TF  +I                          
Sbjct: 304 AVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPM 363

Query: 270 ---------NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
                     G C  G L  A  L + +   G  PN+VTY+ LI G C  GN++KA  L 
Sbjct: 364 NLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELY 423

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            +M  +   P+     +++ G +K     + +++     +     N + Y+ ++S L K 
Sbjct: 424 TQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKG 482

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK ++A  L   M+ +G  PN V Y+ +I G CR G  D A  +  +M+      N  TY
Sbjct: 483 GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTY 542

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           S L+ G F+ G   KA++++  M   N    +  ++ +I+GLC+ G++ EAR      L 
Sbjct: 543 SILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE 602

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  P  + Y+S++ G    G+++ AL ++ EM   E    P+V TY  L+N  CK + I
Sbjct: 603 EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM--CEFGVSPNVVTYTSLINGFCKSNRI 660

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQD 598
             ++   + M ++G + D+   +  +     +  +E+ QD
Sbjct: 661 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQD 700



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 236/495 (47%), Gaps = 18/495 (3%)

Query: 176 FYNHIVN-AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           F +H++N AK  +   +   FN ++    R   ++NAI  F  M  ++  P +     L+
Sbjct: 173 FVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILL 232

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             L + N + E   L ++M + G +    T +V++    K G +  A +       +G  
Sbjct: 233 TALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVK 292

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
            +   Y+ +I  +C K N +  + LL+ M     +P+E T+ ++I   V  G  V+  R+
Sbjct: 293 LDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRL 352

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M      +N  + ++L+ G   +G  + A+ L+ ++ E G  PN V YS LI+G C 
Sbjct: 353 KEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCN 412

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G  ++A E+  +M  NG   + F  +SL++G+ ++    +A +++ D A +  V N   
Sbjct: 413 SGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLF-DEAVDCGVANIFT 471

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y++++  LC+ GK+ EA  +   M+++G  P+VV+Y+ MI G C  G+++ A  +F++ML
Sbjct: 472 YNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML 531

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KE 591
             + K  P+V TY+IL++   K+ +   ++DL + M+     P   T N  +  L    +
Sbjct: 532 ARDLK--PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 589

Query: 592 KLEAPQDGTDFL-----------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
             EA     +FL           N +     K         +   M +  +SP   T+  
Sbjct: 590 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 649

Query: 641 VVQELCRPKRIQAAI 655
           ++   C+  RI  A+
Sbjct: 650 LINGFCKSNRIDLAL 664



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/318 (28%), Positives = 167/318 (52%), Gaps = 4/318 (1%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A+ LF  M+   +   T  +FN+++N + + G   +  E  + + N      +P+ +T
Sbjct: 556 EKALDLFDQML-SLNIAPTDFTFNTIINGLCKVG---QMSEARDKLKNFLEEGFIPSCMT 611

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N ++    + G +D+A+ ++REM      P++ TY +L++G CK NR+D A+   DEM+
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G       ++ LI+G CK  ++  A  L   +   G  PN + YN++I G     N++
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 731

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A+    +M+  +   +  TY T+I+GL+K GR V  + + M M  +    +   +  L+
Sbjct: 732 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +GL  +G+ E+A K+ ++M  K   P+ ++Y+ LI G  R G   EA  +  EM++ G  
Sbjct: 792 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 851

Query: 435 ANAFTYSSLMKGFFESGK 452
            +  TY  L+ G F+  +
Sbjct: 852 PDDVTYDILINGKFKGDR 869



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 187/409 (45%), Gaps = 19/409 (4%)

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            FN L+N   +   +  A    + M  +  +P     N L+  L  +  + +   L ++M
Sbjct: 192 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 251

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V      +  T   ++   +K GR  +        +ER   ++   YS +I  + K+  +
Sbjct: 252 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 311

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
              ++L ++M E+G  P+   ++++I      G   EA  +  EMIN G   N    +SL
Sbjct: 312 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 371

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           MKG+   G    A+ ++  + ++    N+V YSVLI G C  G + +A  ++TQM   G 
Sbjct: 372 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 431

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEML-CLEPKSQPDVFTYNILLNALCKQSNISH 562
            P V   +S++ G   A   EEA KLF+E + C       ++FTYNI+++ LCK   +  
Sbjct: 432 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC----GVANIFTYNIMMSWLCKGGKMDE 487

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL------------ 610
           +  LL++M+++G  P++V+ N  +     K       + F + LA  L            
Sbjct: 488 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILID 547

Query: 611 --FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
             FK+  +     + + ML   ++P   T+  ++  LC+  ++  A +K
Sbjct: 548 GNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 596



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 92/160 (57%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN + +N +I     L  ++ A+  +++M       D+ TY TL+DGL KE RL  A  L
Sbjct: 712 PNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDL 771

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM   G  P  +TF+VL+NGLC  G+L  A K+++ M  K   P+ + YNTLI G   
Sbjct: 772 YMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFR 831

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
           +GNL +A +L D M+    +P++VTY  +ING  K  R++
Sbjct: 832 EGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSL 871


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 143/476 (30%), Positives = 239/476 (50%), Gaps = 16/476 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P T  F+ ++  + R+G    AI LF ++  +   P I T+  L++    ++    A  L
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  +   G  P  VTFN +ING C NG + +A     N+  +G L ++ TY TLI+GL  
Sbjct: 113 LATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSK 172

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +  A+ LL  M  S   PN V Y  +I+GL K G   D   +   + ER   ++   
Sbjct: 173 NGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVT 232

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++LI G    G+ ++  +L  +M+ +   P+   ++ LID LC+ G+  EA+ +L  M 
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  TY++LM+G+      H+A E++  M K     + + Y+VLI G C+   + 
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA +++ ++ ++   P + +Y+S+I GLCN+G +    KL +EM        PDV TYNI
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEM--HGSAQPPDVVTYNI 410

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQD--------- 598
           L++ALCK+  I  ++ +L  MM +G  P++VT N  +    L+  +   +D         
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470

Query: 599 -GTDFLN-ELAIRLF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
              D LN  + I  + K +       + + M  K L P  +++  ++  LC   RI
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRI 526



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 158/551 (28%), Positives = 262/551 (47%), Gaps = 59/551 (10%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           AI LF T +       ++ +F  ++N    +     A      I+ + +    PN +TFN
Sbjct: 74  AISLF-TQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQ---PNLVTFN 129

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I   C  G++  A+   + +  +    D +TY TL++GL K  ++  A+ LL EM+  
Sbjct: 130 TIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKS 189

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P  V ++ LI+GLCK+G +  A  L   +  +G L + VTYN+LI G C  G   + 
Sbjct: 190 SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEV 249

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             LL +MV     P++ T+  +I+ L K GR ++   VL  M +R    +   Y+ L+ G
Sbjct: 250 TQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEG 309

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
                   +A +L+ +M+++G +P+ + Y+ LIDG C+    DEA  +  E+ N      
Sbjct: 310 YCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPT 369

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             +Y+SL+ G   SG+     ++  +M  +    + V Y++LI  LC++G++ EA  V  
Sbjct: 370 IASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLV 429

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEP-------------KSQ 541
            M+ +G KP++V Y++M+ G C   +V  A  +FN M+   LEP             K++
Sbjct: 430 MMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTE 489

Query: 542 ------------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
                             PD+ +YN L++ LC    I H  +LL+ M D G  PD++T N
Sbjct: 490 MVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYN 549

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           I L A  +    P D        AI LF RQ   G            + P   T   +V 
Sbjct: 550 ILLDAFCKT--QPFDK-------AISLF-RQIVEG------------IWPDFYTNHAIVD 587

Query: 644 ELCRPKRIQAA 654
            LC+ ++++ A
Sbjct: 588 NLCKGEKLKMA 598



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/596 (26%), Positives = 283/596 (47%), Gaps = 42/596 (7%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSG-DFKSLEMVLYRMRREKRVVLE 118
           +S   F+  +  +  K G YQ    TF ++I  +  +G  FK+L+          + +L 
Sbjct: 103 QSHTAFAFSLLATILKSG-YQPNLVTFNTIINGFCINGMIFKALDFC--------QNLLA 153

Query: 119 KSFIFIFKAYG-------KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
           + ++F    YG       K   ++ A+ L   M ++   +  +  ++++++ + ++G   
Sbjct: 154 QGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM-EKSSVQPNLVMYSALIDGLCKDGFVS 212

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            AL   + I       IL + +T+N +I   C +G      QL  +M   N +PD YT+ 
Sbjct: 213 DALGLCSQI---GERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L+D LCKE R+ EA  +L  M   G  P  VT+N L+ G C    +  A +L + M  +
Sbjct: 270 ILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKR 329

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+ + YN LI G C    +D+A+ L   +     +P   +Y ++I+GL   GR    
Sbjct: 330 GLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHV 389

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            ++L  M       +   Y+ LI  L KEG+  +A+ +   MM+KG KPN V Y+A++DG
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            C     + A++I   M+ +G   +   Y+ L+ G+ ++    +A+ ++K+M   N + +
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y+ LI GLC  G++   + +  +M   G  PDV+ Y+ ++   C     ++A+ LF 
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
           +++       PD +T + +++ LCK   +  + D L  ++  GC P++ T  I + AL  
Sbjct: 570 QIV---EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCK 626

Query: 590 -------------KEKLEAPQDGTDFLNELAIR-LFKRQRTSGGFKIVEVMLQKFL 631
                         E  + P D   F  E+ I  L +R  T    K+ E M+ + L
Sbjct: 627 DGSFGEAMLLLSKMEDNDRPPDAITF--EIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 217/452 (48%), Gaps = 23/452 (5%)

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CR   VD+A+  F  M      P    +  L+  + +      A+ L  ++Q  G  P+ 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TF +LIN          A  L+  +   G  PN VT+NT+I+G C+ G + KA+     
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           ++A   + ++ TYGT+INGL K G+      +L  ME+     N  +YS LI GL K+G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             DA+ L  Q+ E+G   + V Y++LIDG C VG+  E  ++L +M+      + +T++ 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+    + G+  +A  +   M+K     + V Y+ L+ G C    + EAR ++ +M+ RG
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            +PDV+ Y+ +I G C    V+EA+ LF E LC      P + +YN L++ LC    ISH
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKE-LC-NKNLVPTIASYNSLIDGLCNSGRISH 388

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
              LL+ M      PD+VT NI + A                     L K  R      +
Sbjct: 389 VKKLLDEMHGSAQPPDVVTYNILIDA---------------------LCKEGRILEALGV 427

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           + +M++K + P   T+  ++   C    +  A
Sbjct: 428 LVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVA 459



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 176/375 (46%), Gaps = 19/375 (5%)

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           H  C   N+D AV+  +RMV     P    +  ++  +V++G       +   ++ +   
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   ++ LI+  F +     A  L   +++ G +PN V ++ +I+G C  G   +A + 
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              ++  G   + FTY +L+ G  ++G+   A+ + ++M K++   N V YS LI GLC+
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           DG + +A  + +Q+  RG   D V Y+S+I G C+ G  +E  +L  +M  +     PD 
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKM--VRENVDPDD 265

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
           +T+NIL++ALCK+  I  +  +L  M  RG  PD+VT N  +     + E   +  +  N
Sbjct: 266 YTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSR-ENVHEARELFN 324

Query: 605 ELAIRLF---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
            +  R                 K +       + + +  K L P  +++  ++  LC   
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSG 384

Query: 650 RIQAAINKCWSNLYG 664
           RI + + K    ++G
Sbjct: 385 RI-SHVKKLLDEMHG 398


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 234/456 (51%), Gaps = 10/456 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           ++ +I+    SG + S   VL  +  +   +   +   +  A      V+E + +   + 
Sbjct: 154 YHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKL- 212

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN--------AKHMNILPNTLTFNL 197
             F C+  + S+N+VL  +     +    E  + +V         A+H    P+   +  
Sbjct: 213 PLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQH-GCTPDIRMYAT 271

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I  +C+ G  + A ++   MP    +P++  Y T++ G+C  +R ++A  LL EM    
Sbjct: 272 IIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKN 331

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C    VTFN+L++  C+NG + R  +L++ M   GC+P+ +TY T+I+G C +G +D+AV
Sbjct: 332 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 391

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            LL  M +  C PN ++Y  ++ GL    R VD   ++  M ++    N   ++T+I+ L
Sbjct: 392 MLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFL 451

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K+G  E A++L KQM+  GC P+ + YS +IDGL + GK +EA E+L  MIN G   N 
Sbjct: 452 CKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNV 511

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TYSS+       G+  K ++++ ++       + V Y+ +I  LC+  +   A      
Sbjct: 512 ITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAY 571

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           M+S GC P+   Y+++I GL + G + EA  L +E+
Sbjct: 572 MVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607



 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 245/472 (51%), Gaps = 36/472 (7%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N ++   CR+G V+ A +L   +PV    P+ YTY  ++ GLC   R+ +A+ +LDEM 
Sbjct: 87  YNAMVAGYCRVGQVEAARRLAAAVPV---PPNAYTYFPVVRGLCGRGRIADALAVLDEMT 143

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
              C P P  ++V+I   C++G    A ++++ +  KG   +    N +I+ +C +G +D
Sbjct: 144 SRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVD 203

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV----------LMSMEERKFH 364
           + + +L ++    C  + V+Y  ++ GL    R  D   +          L  M +    
Sbjct: 204 EGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCT 263

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +  +Y+T+I G+ KEG  E A ++  +M   G KPN V Y+ ++ G+C   + ++AEE+
Sbjct: 264 PDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEEL 323

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L EM    C  +  T++ L+  F ++G   + +E+ + M ++ C+ + + Y+ +I+G C+
Sbjct: 324 LTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 383

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +G + EA M+   M S GCKP+ ++Y+ ++ GLC+     +A +L + M  ++    P+ 
Sbjct: 384 EGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRM--IQQGCLPNP 441

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            T+N ++N LCK+  +  +I+LL  M+  GC+PDL++ +  +           DG     
Sbjct: 442 VTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVI-----------DG----- 485

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                L K  +T    +++ VM+ K ++P   T+  +   L R  RI   I 
Sbjct: 486 -----LGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQ 532



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 189/357 (52%), Gaps = 22/357 (6%)

Query: 132 HLVEEAIRLFHTMVD-------------------EFHCKRTVKSFNSVLNVIIQEGLYHR 172
           H     IR++ T++D                    +  K  V  +N+VL  I     + +
Sbjct: 260 HGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEK 319

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A E    +      N   + +TFN+++   C+ GLVD  I+L  +M    C PD+ TY T
Sbjct: 320 AEELLTEMY---QKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTT 376

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++G CKE  +DEAV+LL  M   GC P  +++ +++ GLC       A +L+  M  +G
Sbjct: 377 VINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQG 436

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           CLPN VT+NT+I+ LC KG +++A+ LL +M+ + C P+ ++Y T+I+GL K G+  +  
Sbjct: 437 CLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEAL 496

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  M  +    N   YS++   L +EG+ +  ++++  + +   + + V+Y+A+I  L
Sbjct: 497 ELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSL 556

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           C+  + D A + L  M++NGC  N  TY++L+KG    G   +A ++  ++     V
Sbjct: 557 CKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAV 613



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 193/372 (51%), Gaps = 5/372 (1%)

Query: 132 HLVEEAIRLFHTM--VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
            L++E +++   +  + +  C   ++ + ++++ I +EG +  A E  + +       + 
Sbjct: 242 ELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRM---PSYGLK 298

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN + +N V+K +C     + A +L  EM  +NC  D  T+  L+D  C+   +D  + L
Sbjct: 299 PNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIEL 358

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L++M   GC P  +T+  +ING CK G +  A  L+ NM   GC PN ++Y  ++ GLC 
Sbjct: 359 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCS 418

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
                 A  L+ RM+   C+PN VT+ TIIN L K G       +L  M     + +   
Sbjct: 419 TERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLIS 478

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YST+I GL K GK E+A++L   M+ KG  PN + YS++   L R G+ D+  ++   + 
Sbjct: 479 YSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQ 538

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +    ++A  Y++++    +  +   A++    M  N C+ NE  Y+ LI GL  +G L 
Sbjct: 539 DATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLC 598

Query: 490 EARMVWTQMLSR 501
           EA+ + +++ SR
Sbjct: 599 EAQDLLSELCSR 610



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 128/289 (44%), Gaps = 39/289 (13%)

Query: 81  LGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           L D TF  L+  +  +G    +  +L +M     +    ++  +   + K  L++EA+ L
Sbjct: 334 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML 393

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
              M     CK    S+  VL  +     +  A E  + ++       LPN +TFN +I 
Sbjct: 394 LKNM-PSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMI---QQGCLPNPVTFNTIIN 449

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+ GLV+ AI+L ++M V  C PD+ +Y T++DGL K  + +EA+ LL+ M   G  P
Sbjct: 450 FLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITP 509

Query: 261 TPVTF-----------------------------------NVLINGLCKNGELGRAAKLV 285
             +T+                                   N +I+ LCK  E   A   +
Sbjct: 510 NVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFL 569

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
             M   GC+PNE TY  LI GL  +G L +A  LL  + + + +   +T
Sbjct: 570 AYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAVRKHLT 618



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 139/346 (40%), Gaps = 71/346 (20%)

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S LI  L   G+  DA++    +   G     V Y+A++ G CRVG+ + A  +   +  
Sbjct: 56  SALIRSLCVAGRTADAVR---ALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAV-- 110

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
                NA+TY  +++G    G+   A+ +  +M   +CV     Y V+I   C  G    
Sbjct: 111 -PVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169

Query: 491 ARMVWTQMLSR-----------------------------------GCKPDVVAYSSMIH 515
           A  V   + ++                                   GC+ D+V+Y++++ 
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229

Query: 516 GLCNA---GSVEEALKLFNEMLCL-EPKSQ-------PDVFTYNILLNALCKQSNISHSI 564
           GLC A   G VEE   L +EM+ + E  SQ       PD+  Y  +++ +CK+ +   + 
Sbjct: 230 GLCAAKRWGDVEE---LMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVAN 286

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALK-----EKLE----------APQDGTDFLNELAIR 609
           ++L+ M   G  P++V  N  L  +      EK E           P D   F N L   
Sbjct: 287 EILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTF-NILVDF 345

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             +        +++E ML+    P   T+  V+   C+   I  A+
Sbjct: 346 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAV 391


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 230/419 (54%), Gaps = 5/419 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           + N+++  +  +G   +AL F++ ++ A+   +  N +++  +I  VC++G    AI+  
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLL-AQGFQL--NQVSYATLINGVCKIGDTRAAIKFL 187

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R++  R  +PD+  Y T++D +CK   + EA  L  EM V G     VT+N LI G C  
Sbjct: 188 RKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIV 247

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A  L++ M LK   PN  TYN L+  LC +G + +A S+L  M+ +   P+ +TY
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G   +        V  +M       + + Y+ LI+G  K    ++A+ L+K+M +
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P  V YS+LIDGLC+ G+     +++ EM + G  A+  TYSSL+ G  ++G   +
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDR 427

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ ++  M       N   +++L+ GLC+ G+L++A+ V+  +L++G   +V  Y+ MI+
Sbjct: 428 AIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIN 487

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           G C  G +EEAL + ++M   +    P+ FT+  ++ AL K+     +  LL  M+ RG
Sbjct: 488 GHCKQGLLEEALTMLSKM--EDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 235/455 (51%), Gaps = 6/455 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++A+  F+ M+   H    ++ FN +L+   +   Y  A+   +H +  K   I P+ +
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQ-FNKILDSFAKMKHYSTAVSL-SHRLELK--GIQPDLI 95

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I   C +G +     +  ++  R   PD  T  TL+ GLC + ++ +A+   D++
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G     V++  LING+CK G+   A K +  +  +   P+ V YNT+I  +C    +
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLV 215

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L   M       + VTY T+I G   +G+  +   +L  M  +  + N Y Y+ L
Sbjct: 216 SEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEGK ++A  +   M++   KP+ + YS L+DG   V +  +A+ +   M   G 
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY+ L+ GF ++    +A+ ++K+M + N V   V YS LI GLC+ G++     
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWD 395

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  +M  RG   DV+ YSS+I GLC  G ++ A+ LFN+M   + + +P++FT+ ILL+ 
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM--KDQEIRPNIFTFTILLDG 453

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           LCK   +  + ++   ++ +G   ++ T N+ +  
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING 488



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 168/354 (47%), Gaps = 16/354 (4%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           N+D AVS  +RM+  +  P  + +  I++   K+        +   +E +    +    +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+     G+      +  +++++G  P+TV  + LI GLC  G+  +A     +++  
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  +Y++L+ G  + G    A++  + +       + V Y+ +I  +C+   + EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEA 218

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++++M  +G   DVV Y+++I+G C  G ++EA+ L NEM+       P+V+TYNIL+
Sbjct: 219 YGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVL--KTINPNVYTYNILV 276

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIR 609
           +ALCK+  +  +  +L  M+     PD++T +  +    L  +++  Q   + ++ + + 
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 610 ------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                         K +       + + M QK + P   T+  ++  LC+  RI
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 82/141 (58%), Gaps = 3/141 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +++S+++ + + G   RA+  +N +   K   I PN  TF +++  +C+ G + +A +
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKM---KDQEIRPNIFTFTILLDGLCKGGRLKDAQE 465

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F+++  +    ++YTY  +++G CK+  L+EA+ +L +M+ +GC P   TF  +I  L 
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525

Query: 274 KNGELGRAAKLVDNMFLKGCL 294
           K  E  +A KL+  M  +G L
Sbjct: 526 KKDENDKAEKLLRQMIARGLL 546


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 161/568 (28%), Positives = 275/568 (48%), Gaps = 45/568 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T   LI    +SG F+    V  +M  +     E SF  + + Y +A L   A+ L   M
Sbjct: 153 TLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGM 212

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
              F  +     +N++++   +EG   R  E    +   +   + P+ +TFN  I  +C 
Sbjct: 213 -GSFGVQPNKVIYNTLISSFCREG---RNEEAERLVERMREDGLFPDVVTFNSRISALCS 268

Query: 205 LGLVDNAIQLFREMPVRN----CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            G +  A ++FR+M +        P+I T+  +++G CKE  L+EA  L++ M+ +G   
Sbjct: 269 AGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLM 328

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              ++N+ + GL +NG+L  A   +  M  KG  PN  ++NT++ GLC  G +  A  ++
Sbjct: 329 ELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIM 388

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             M++S   P+ VTY T+++G    G+ +    +L  M  R    N Y  + L+  L+KE
Sbjct: 389 GLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKE 448

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+  +A KL ++M E+    + V  + +IDGLC+ GK DEA EI+  M  +G AA     
Sbjct: 449 GRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLG 508

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +S +     S  G K            C+ + + YS++I+GLC+ G+L EAR  + +M+ 
Sbjct: 509 NSFIGLVDSSSNGKK------------CLPDLITYSIIINGLCKAGRLDEARKKFIEMVG 556

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSN 559
           +   PD + Y + IH  C  G +  A ++  +M   E +     + TYN L+  L  ++ 
Sbjct: 557 KSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDM---EKRGCNKSLQTYNSLILGLGSKNQ 613

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           I     LL+ M ++G  P++ T N  ++ L E     +D T  L+E              
Sbjct: 614 IFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRI-KDATSLLDE-------------- 658

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCR 647
                 MLQK +SP  S++  +++  C+
Sbjct: 659 ------MLQKGISPNISSFRLLIKAFCK 680



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 223/511 (43%), Gaps = 67/511 (13%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVV-LEKSFIFIFKAYGKAHLVEEAIRLFH 142
           +TF  +++ +   G  +  + ++  M+R   ++ LE   I++        L+E  + L  
Sbjct: 296 TTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL-K 354

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MVD+   +  + SFN+V++ + + GL   A      ++++    I P+T+T++ ++   
Sbjct: 355 EMVDK-GIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISS---GIGPDTVTYSTLLHGC 410

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM---------------------------- 234
           C  G V  A  +  EM  R C P+ YT   L+                            
Sbjct: 411 CSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDN 470

Query: 235 -------DGLCKENRLDEAVLLLDEMQVDG-----------------------CFPTPVT 264
                  DGLCK  +LDEAV +++ M + G                       C P  +T
Sbjct: 471 VTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLIT 530

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++++INGLCK G L  A K    M  K   P+ + Y+T IH  C  G +  A  +L  M 
Sbjct: 531 YSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDME 590

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C  +  TY ++I GL    +  +   +L  M+E+    N   Y+ +IS L + G+ +
Sbjct: 591 KRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIK 650

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           DA  L  +M++KG  PN   +  LI   C+       +E+ FE+  + C      YS + 
Sbjct: 651 DATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEV-FEIALSICGHKEALYSLMF 709

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCV-YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
                 G+  +A E++ D A + C       Y+ LI  LC+D  L  A  +  +M+ +G 
Sbjct: 710 NELLIGGEVSEAKELF-DAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGY 768

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           + D  ++  +I GL   G   +A +L   M+
Sbjct: 769 RFDPASFMPVIDGLGKRGKKHDADELAERMM 799



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 79/288 (27%), Positives = 132/288 (45%), Gaps = 37/288 (12%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP+ +T++++I  +C+ G +D A + F EM  ++  PD   Y T +   CK  ++  A  
Sbjct: 525 LPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFR 584

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L +M+  GC  +  T+N LI GL    ++     L+D+M  KG  PN  TYN +I  LC
Sbjct: 585 VLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLC 644

Query: 309 LKGNLDKAVSLLDRMVASKCMPN----------------------------------EVT 334
             G +  A SLLD M+     PN                                  E  
Sbjct: 645 EGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEAL 704

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y  + N L+  G   +   +  +  +R F +  + Y+ LI  L K+   E+A  +  +M+
Sbjct: 705 YSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMI 764

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEI---LFEMINNGCAANAFT 439
           +KG + +   +  +IDGL + GK  +A+E+   + +M + G   N  T
Sbjct: 765 DKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASEGMVENKIT 812


>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 780

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/479 (27%), Positives = 241/479 (50%), Gaps = 47/479 (9%)

Query: 152 RTVKSFNSVLNVIIQEG---LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
           R+ +SF  V++++ ++    LY + LE        K   +  ++  F ++I    ++GL 
Sbjct: 90  RSGESFGLVIDMLSEDNGCDLYWQTLE------ELKSGGVSVDSYCFCVLISAYAKMGLA 143

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE-AVLLLDEMQVDGCFPTPVTFNV 267
           + A++ F  M   +C PD++TY  ++  + +E+     A  + +EM    C P   TF +
Sbjct: 144 EKAVESFGRMKEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGI 203

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L++GL K G    A K+ D+M  +G  PN VTY  LI GLC +G+ + A  L   M AS 
Sbjct: 204 LMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASG 263

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+ V +  +++G  KLGR V+   +L   E+  F +    YS+LI GLF+  +   A 
Sbjct: 264 NYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAF 323

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           +L+  M+++  KP+ ++Y+ LI GL + GK ++A ++L  M + G   + + Y++++K  
Sbjct: 324 ELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKAL 383

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
              G   +   +  +M++     +   +++LI  +C +G +R+A  ++ ++   GC P V
Sbjct: 384 CGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSV 443

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--------------------------- 540
             ++++I GLC +G ++EA  L ++M    P S                           
Sbjct: 444 ATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYK 503

Query: 541 ----------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                      PD+ +YN+L+N  C++ +I  ++ LLN +  +G  PD VT N  +  L
Sbjct: 504 NLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 207/450 (46%), Gaps = 44/450 (9%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHR-ALEFYNH 179
           F  +  AY K  L E+A+  F  M  EF C+  V ++N +L ++++E ++   A   YN 
Sbjct: 130 FCVLISAYAKMGLAEKAVESFGRM-KEFDCRPDVFTYNVILRIMMREDVFFMLAFAVYNE 188

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++     N  PN  TF +++  + + G   +A ++F +M  R   P+  TY  L+ GLC+
Sbjct: 189 MLKC---NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
               ++A  L  EM+  G +P  V  N L++G CK G +  A +L+      G +     
Sbjct: 246 RGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y++LI GL       +A  L   M+     P+ + Y  +I GL K G+  D  ++L SM 
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMP 365

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    + Y Y+ +I  L   G  E+   L  +M E    P+   ++ LI  +CR G   
Sbjct: 366 SKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGK-----------------------GHKA 456
           +AEEI  E+  +GC+ +  T+++L+ G  +SG+                        H  
Sbjct: 426 KAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLAHSG 485

Query: 457 VEIWKDMAKNNCVYNE----------------VCYSVLIHGLCEDGKLREARMVWTQMLS 500
              +  M ++  +                   V Y+VLI+G C +G +  A  +   +  
Sbjct: 486 NRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQL 545

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +G  PD V Y+++I+GL   G  EEA KLF
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLF 575



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 126/471 (26%), Positives = 224/471 (47%), Gaps = 29/471 (6%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           E +RLF    D F     ++ ++S+++ + +   Y +A E Y    N    NI P+ + +
Sbjct: 289 ELLRLFEK--DGFVL--GLRGYSSLIDGLFRARRYTQAFELY---ANMLKRNIKPDIILY 341

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
            ++I+ + + G +++A++L R MP +   PD Y Y  ++  LC    L+E   L  EM  
Sbjct: 342 TILIQGLSKAGKIEDALKLLRSMPSKGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSE 401

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
              FP   T  +LI  +C+NG + +A ++   +   GC P+  T+N LI GLC  G L +
Sbjct: 402 TESFPDACTHTILICSMCRNGLVRKAEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKE 461

Query: 316 AVSLLDRM----VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           A  LL +M     AS  +    +     + +V+ G  +   + L    +     +   Y+
Sbjct: 462 ARLLLHKMEVGRPASLFLRLAHSGNRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYN 521

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+G  +EG  + A+KL   +  KG  P++V Y+ LI+GL RVG+ +EA ++ +    +
Sbjct: 522 VLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KD 579

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIW-KDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
               +   Y SLM       K   A  +W K + K +C+ +E      I    ++G+   
Sbjct: 580 DFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETANE--IEQCFKEGETER 637

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQPDVFT 546
           A     ++ +R  +  +  Y+  + GLC +G   EAL +F+ +    + + P S      
Sbjct: 638 ALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVK--- 694

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KEKLE 594
              L++ LCK+  +  +ID+    +D         CN  L++L   +EK+E
Sbjct: 695 ---LIHGLCKREQLDAAIDVFLYTLDNNFKLMPRVCNYLLSSLLQSREKME 742



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 156/370 (42%), Gaps = 52/370 (14%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           ++EIF    K G      +TF +LI     SG+ K   ++L++M   +   L        
Sbjct: 427 AEEIFLEIEKSGCSP-SVATFNALIDGLCKSGELKEARLLLHKMEVGRPASL-------- 477

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
                       +RL H             S N   + ++Q G   +A +   H  +  +
Sbjct: 478 -----------FLRLAH-------------SGNRSFDTMVQSGSILKAYKNLAHFADTGN 513

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
               P+ +++N++I   CR G +D A++L   + ++   PD  TY TL++GL +  R +E
Sbjct: 514 S---PDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLI 304
           A  L      D    +P  +  L+   C+  +L  A  L      K  CL +E T N + 
Sbjct: 571 AFKLF--YAKDDFRHSPAVYRSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDE-TANEIE 627

Query: 305 HGLCLK-GNLDKAVSLLDRMVASKCMPNEVTYG--TI-INGLVKLGRAVDGARVLMSMEE 360
              C K G  ++A   L R++      +E+T G  TI + GL + GR  +   V   + E
Sbjct: 628 Q--CFKEGETERA---LRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLRE 682

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +K  V       LI GL K  + + A+ ++   ++   K    V + L+  L    +  E
Sbjct: 683 KKILVTPPSCVKLIHGLCKREQLDAAIDVFLYTLDNNFKLMPRVCNYLLSSLL---QSRE 739

Query: 421 AEEILFEMIN 430
             EI+ ++ N
Sbjct: 740 KMEIVSQLTN 749


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 226/444 (50%), Gaps = 11/444 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           +  FNS+L  + + G      E +  + +A   ++ P+ +T+ +++  +C+ G V +A++
Sbjct: 131 ISIFNSLLTALGRAGNLRGMTELFTSMRDA---SVKPDVVTYGILLNGLCKSGHVGDALK 187

Query: 214 LFREM--PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM--QVDGCFPTPVTFNVLI 269
           +   M  P  +  PDI    T++DGLCK  RL +A++ +DE    V GC P  VT+N L 
Sbjct: 188 VLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLA 247

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL--DRMVASK 327
           +  C+ G++G A K+V  M  +G  PN +T NT+I GLC  G +  A+      R V  +
Sbjct: 248 DAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPE 307

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
              N VTY T+ +  +          +   M +     +  +Y T+ISGL + G+  DA 
Sbjct: 308 ARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDAC 367

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
                M + G K +   Y+ LI G CR  K  EA E+L EM   G   + +TY++L+ G 
Sbjct: 368 TTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGL 427

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            ++G      E+   M  + C  + V +  L+HG C+ GK  EA  ++  M     +P+ 
Sbjct: 428 CKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNT 487

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V Y+++I  LC +  V+ A+KLF+EM   E     +V TYN LL  L  +     + +L+
Sbjct: 488 VIYNTLIDFLCKSREVDVAIKLFDEMR--EKNVPANVTTYNALLKGLQDKKMAEKAFELM 545

Query: 568 NSMMDRGCDPDLVTCNIFLTALKE 591
           + M +  C P+ VT ++ +  L E
Sbjct: 546 DRMREERCTPNYVTVDVLMEWLPE 569



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 142/463 (30%), Positives = 227/463 (49%), Gaps = 26/463 (5%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+   FN ++  + R G +    +LF  M   + +PD+ TY  L++GLCK   + +A+ +
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 250 LDEMQVDG--CFPTPVTFNVLINGLCKNGELGRAAKLVDNMF--LKGCLPNEVTYNTLIH 305
           LD M   G    P     N +++GLCK G L +A   VD     + GC PN VTYN L  
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER---- 361
             C  G++  A  ++ RM      PN +T  TII GL ++GR   GA +    E+R    
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRV--GAALEFFREKRTVWP 306

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
           +   N   YSTL S        + AM+L+ +M + G +P+ V+Y  +I GL + G+  +A
Sbjct: 307 EARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDA 366

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
                 M   G   +A  Y+ L+ GF    K H+A E+ ++M       +   Y+ L+ G
Sbjct: 367 CTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSG 426

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC+ G       +   M+  GC+P VV + +++HG C AG  +EAL++F  M   E + Q
Sbjct: 427 LCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSM--DEARIQ 484

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           P+   YN L++ LCK   +  +I L + M ++    ++ T N  L  L++K  A      
Sbjct: 485 PNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMA------ 538

Query: 602 FLNELAIRLFKR---QRTSGGFKIVEVMLQKFLSPQTSTWERV 641
              E A  L  R   +R +  +  V+V+++    P+    ER+
Sbjct: 539 ---EKAFELMDRMREERCTPNYVTVDVLMEWL--PEIGETERL 576



 Score =  175 bits (443), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 191/421 (45%), Gaps = 35/421 (8%)

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           + A  L D +      P    FN L+  L + G L    +L  +M      P+ VTY  L
Sbjct: 113 EAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGIL 172

Query: 304 IHGLCLKGNLDKAVSLLDRMVA--SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           ++GLC  G++  A+ +LDRM +  S   P+     T+++GL K+GR     + ++ ++ER
Sbjct: 173 LNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRL---QQAIIFVDER 229

Query: 362 KFHV-----NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
             HV     N   Y+ L     + G    A K+  +M ++G  PN +  + +I GLCRVG
Sbjct: 230 MRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVG 289

Query: 417 KPDEAEEILFE--MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +   A E   E   +      NA TYS+L   F        A+E++ +MA +    + V 
Sbjct: 290 RVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVM 349

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y  +I GL + G+L +A      M   G K D  AY+ +I G C    + EA +L  EM 
Sbjct: 350 YFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMK 409

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            +    QPDV+TYN LL+ LCK  + S   +LL  M+D GC P +VT             
Sbjct: 410 GV--GLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVT------------- 454

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      L     K  +T    +I   M +  + P T  +  ++  LC+ + +  A
Sbjct: 455 --------FGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVA 506

Query: 655 I 655
           I
Sbjct: 507 I 507



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 152/307 (49%), Gaps = 10/307 (3%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI----YTYCTLMDGLCKENR 242
            + PN +T N +I  +CR+G V  A++ FRE   R   P+      TY TL       N 
Sbjct: 270 GVAPNVITMNTIIGGLCRVGRVGAALEFFREK--RTVWPEARGNAVTYSTLASAFLHCNN 327

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           +D A+ L  EM   G  P  V +  +I+GL + G L  A     +M   G   +   YN 
Sbjct: 328 VDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNI 387

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG--RAVDGARVLMSMEE 360
           LI G C K  L +A  LL+ M      P+  TY T+++GL K G   AVD   +L  M +
Sbjct: 388 LIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVD--ELLGHMID 445

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                +   + TL+ G  K GK ++A+++++ M E   +PNTV+Y+ LID LC+  + D 
Sbjct: 446 DGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDV 505

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A ++  EM      AN  TY++L+KG  +     KA E+   M +  C  N V   VL+ 
Sbjct: 506 AIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLME 565

Query: 481 GLCEDGK 487
            L E G+
Sbjct: 566 WLPEIGE 572



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 150/306 (49%), Gaps = 9/306 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP----NTLTFNLVIKTVCRLGLVD 209
           V + N+++  + + G    ALEF+      +   + P    N +T++ +         VD
Sbjct: 275 VITMNTIIGGLCRVGRVGAALEFFR-----EKRTVWPEARGNAVTYSTLASAFLHCNNVD 329

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
            A++LF EM      PD   Y T++ GL +  RL +A      M+  G       +N+LI
Sbjct: 330 MAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILI 389

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
            G C+  +L  A +L++ M   G  P+  TYNTL+ GLC  G+      LL  M+   C 
Sbjct: 390 GGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQ 449

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+ VT+GT+++G  K G+  +  R+  SM+E +   N  IY+TLI  L K  + + A+KL
Sbjct: 450 PSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKL 509

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + +M EK    N   Y+AL+ GL      ++A E++  M    C  N  T   LM+   E
Sbjct: 510 FDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPE 569

Query: 450 SGKGHK 455
            G+  +
Sbjct: 570 IGETER 575



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 159/337 (47%), Gaps = 10/337 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  L   +   GD      ++ RM +E     V+   + I      G+     E  R  
Sbjct: 242 TYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREK 301

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            T+  E   +    +++++ +  +       A+E ++ + +  H    P+ + +  +I  
Sbjct: 302 RTVWPE--ARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHR---PDAVMYFTMISG 356

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           + + G + +A      M     + D   Y  L+ G C++ +L EA  LL+EM+  G  P 
Sbjct: 357 LTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPD 416

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             T+N L++GLCK G+     +L+ +M   GC P+ VT+ TL+HG C  G  D+A+ +  
Sbjct: 417 VYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFR 476

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFHVNEYIYSTLISGLFKE 380
            M  ++  PN V Y T+I+ L K  R VD A ++   M E+    N   Y+ L+ GL  +
Sbjct: 477 SMDEARIQPNTVIYNTLIDFLCK-SREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDK 535

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
             AE A +L  +M E+ C PN V    L++ L  +G+
Sbjct: 536 KMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGE 572


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/477 (29%), Positives = 250/477 (52%), Gaps = 11/477 (2%)

Query: 100 KSLEMVLYRMRREKRVVLEKSFI---FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKS 156
           K   +V++  +R +   ++ ++I    +  +Y     +  A  +F  ++ +   +  + +
Sbjct: 63  KHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKIL-KLGYQPDIIT 121

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           + +++  +   G    +L F++ +V+     I  + +++  +I  +C++G    A++L R
Sbjct: 122 YTTLIRGLCLNGQVKESLNFHDRLVSQ---GIKLDHVSYGTLINGLCKIGQTGPALRLLR 178

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           ++    C PD+  Y T++DGLCK+  + +A  L  EM     FP  VT+  LI G C  G
Sbjct: 179 KIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVG 238

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +L +A  L++ M LK   PN  T+NTL+ GLC +G + +A SL+  M+     P+  TY 
Sbjct: 239 QLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYN 298

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +++G   +  A     V   M +     + + YS +ISGL K    ++AM L++ M  +
Sbjct: 299 ALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNE 358

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
              P+ V YS+LIDGLC+ G+ + A + + EM + G   N  TY+SL+    +S +  KA
Sbjct: 359 NVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKA 418

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + + K +       N   Y++L+ GLC+DG+L +A+ V+  +L +G   DVV YS MI+G
Sbjct: 419 IALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMING 478

Query: 517 LCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           LC     +EAL L ++M   E K   PD   Y  ++NA  ++     +  LL  M+D
Sbjct: 479 LCKESLFDEALTLLSKM---EDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 250/522 (47%), Gaps = 38/522 (7%)

Query: 104 MVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
           MV+ R R    ++   + +     +     + +AI  F+ M+        +  F  +L  
Sbjct: 1   MVILRFRFHS-IIPNSTLLLSHTHFHSLPNLNDAIDSFNRML-RMRPPPPIIKFGKILGS 58

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           +++   Y   +  +  +   +   I  N +T N++I + C L  +++A  +F ++     
Sbjct: 59  LVKTKHYPIVIHLFQRM---ELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGY 115

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
           +PDI TY TL+ GLC   ++ E++   D +   G     V++  LINGLCK G+ G A +
Sbjct: 116 QPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALR 175

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           L+  +  + C P+ V YNT+I GLC    +  A  L   M   +  PN VTY ++I G  
Sbjct: 176 LLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFC 235

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
            +G+      +L  M  +  + N   ++TL+ GL KEGK  +A  L   MM++G  P+  
Sbjct: 236 IVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVF 295

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y+AL+DG   V +  +A+ +   M   G   +  +YS ++ G  +     +A+++++ M
Sbjct: 296 TYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGM 355

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
              N + + V YS LI GLC+ G++  A     +M  RG  P+V+ Y+S+I  LC +  V
Sbjct: 356 RNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQV 415

Query: 524 EEALKLFNEM------------------LCLEPK---------------SQPDVFTYNIL 550
           ++A+ L  ++                  LC + +                  DV TY+I+
Sbjct: 416 DKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIM 475

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +N LCK+S    ++ LL+ M D+GC PD +     + A  EK
Sbjct: 476 INGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEK 517


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 150/502 (29%), Positives = 237/502 (47%), Gaps = 46/502 (9%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K Y K   ++ A+ LF  M +   C   V ++  ++    + G   +A E YN +   
Sbjct: 335 LMKGYCKQGDLDSALELFDKMNENGICPNNV-TYAVIIEWCCKNGNMDKAYEIYNQM--- 390

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K+ +I P     N +I+   +    + A +LF E  V     +++TY +L+  LCKE ++
Sbjct: 391 KNKDISPTVFNVNSLIRGYLKARSPEEASKLFDE-AVACGIANVFTYNSLLSWLCKEGKM 449

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  + ++M   G  P+ V++N +I G C+ G++  A  +   M  KG  PN +TY+ L
Sbjct: 450 SEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVL 509

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           + G   KG+ + A  L DRM      P++ T   IINGL K GR  +    L  + +  F
Sbjct: 510 MDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF 569

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT--------------------- 402
                 Y+ +I G  KEG    A+ ++ +M + G  PN                      
Sbjct: 570 IPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALK 629

Query: 403 --------------VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
                          VY ALIDG CR G    A ++L E+   G + N   YSS++ GF 
Sbjct: 630 VMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           +      A+ + K M       +   Y+ LI GL ++GKL  A  ++ +ML++G  PD++
Sbjct: 690 KLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLI 749

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEM--LCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            YS +IHGLCN G +E A K+  +M   C+ P     VF YN L+    K+ N+  +  L
Sbjct: 750 TYSVLIHGLCNKGQLENAQKILEDMDRKCMTPT----VFIYNTLITGHFKEGNLQEAFRL 805

Query: 567 LNSMMDRGCDPDLVTCNIFLTA 588
            N M+D+G  PD  T +I +  
Sbjct: 806 HNEMLDKGLVPDDTTYDILVNG 827



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 227/438 (51%), Gaps = 9/438 (2%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCK-RTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
           + + Y KA   EEA +LF   V    C    V ++NS+L+ + +EG    A   +  +V 
Sbjct: 405 LIRGYLKARSPEEASKLFDEAV---ACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMV- 460

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
                + P+ +++N +I   C+ G +D+A  +F EM  +  +P++ TY  LMDG  K+  
Sbjct: 461 --RKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGD 518

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            + A  L D M+ +   P+  T N++INGLCK G    +   +  +  +G +P  +TYN 
Sbjct: 519 TEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNC 578

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I G   +G+++ A+++   M      PN  TY  +ING  K        +V+  M+ + 
Sbjct: 579 IIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKG 638

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
             ++  +Y  LI G  ++G   +A +L  ++ E G  PN VVYS++I G  ++   + A 
Sbjct: 639 IELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAAL 698

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +   MIN G   +   Y++L+ G  + GK   A E++ +M     + + + YSVLIHGL
Sbjct: 699 HLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGL 758

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C  G+L  A+ +   M  +   P V  Y+++I G    G+++EA +L NEML  +    P
Sbjct: 759 CNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEML--DKGLVP 816

Query: 543 DVFTYNILLNALCKQSNI 560
           D  TY+IL+N   K  N+
Sbjct: 817 DDTTYDILVNGKVKDGNL 834



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/491 (24%), Positives = 232/491 (47%), Gaps = 19/491 (3%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I +++ ++   ++  FN ++ +  +   +++A+  F  +  ++  P +      +  L K
Sbjct: 142 IESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVK 201

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            N + EA  + ++M   G      T +V+I    + G+L  A         KG   +   
Sbjct: 202 NNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARA 261

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+ +I  +C K +   A+ LL  M     +P+EV +  +I   +K G+ ++  +V   M 
Sbjct: 262 YSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEML 321

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                +N  + +TL+ G  K+G  + A++L+ +M E G  PN V Y+ +I+  C+ G  D
Sbjct: 322 SCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMD 381

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A EI  +M N   +   F  +SL++G+ ++    +A +++ D A    + N   Y+ L+
Sbjct: 382 KAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLF-DEAVACGIANVFTYNSLL 440

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
             LC++GK+ EA  +W +M+ +G +P VV+Y++MI G C  G ++ A  +F EM  LE  
Sbjct: 441 SWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM--LEKG 498

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            +P++ TY++L++   K+ +  ++  L + M      P   TCNI +  L  K     + 
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLC-KAGRTSES 557

Query: 600 TDFLNELAIRLF---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            D L +L    F               K    +    +   M +  +SP   T+  ++  
Sbjct: 558 QDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLING 617

Query: 645 LCRPKRIQAAI 655
            C+   +  A+
Sbjct: 618 FCKSNNMDLAL 628



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 91/169 (53%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           + + + PN + ++ +I    +L  ++ A+ L + M       D+  Y TL+ GL KE +L
Sbjct: 670 QEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKL 729

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
             A  L  EM   G  P  +T++VLI+GLC  G+L  A K++++M  K   P    YNTL
Sbjct: 730 LFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTL 789

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           I G   +GNL +A  L + M+    +P++ TY  ++NG VK G    GA
Sbjct: 790 ITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFSGA 838



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/353 (21%), Positives = 146/353 (41%), Gaps = 54/353 (15%)

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
           AR++ S     F  +  +++ L++   K  +  DA+  +  ++EK   P   V +  +  
Sbjct: 139 ARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSE 198

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV-Y 470
           L +     EA ++  +M + G   +  T S +++     GK  +A E W   AKN  V  
Sbjct: 199 LVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEA-EGWFREAKNKGVEL 257

Query: 471 NEVCYSVLIHGLC-----------------------------------EDGKLREARMVW 495
           +   YS++I  +C                                   + GK+ EA  V 
Sbjct: 258 DARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVK 317

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +MLS G   +VV  ++++ G C  G ++ AL+LF++M   E    P+  TY +++   C
Sbjct: 318 GEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKM--NENGICPNNVTYAVIIEWCC 375

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE---------- 605
           K  N+  + ++ N M ++   P +   N  +     K  +P++ +   +E          
Sbjct: 376 KNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYL-KARSPEEASKLFDEAVACGIANVF 434

Query: 606 ----LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               L   L K  + S    I E M++K + P   ++  ++   C+   + +A
Sbjct: 435 TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSA 487



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 96/201 (47%), Gaps = 16/201 (7%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGL------YHRALEFYNHIVNAK--- 184
           +E  + ++  ++D F  K  + + + +L+ + + GL      Y   +  +  + N +   
Sbjct: 639 IELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAAL 698

Query: 185 --HMNILPNTLTFNLVIKTVCRLGLVDN-----AIQLFREMPVRNCEPDIYTYCTLMDGL 237
             H  ++   +  +L I T    GL+       A +L+ EM  +   PD+ TY  L+ GL
Sbjct: 699 HLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGL 758

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           C + +L+ A  +L++M      PT   +N LI G  K G L  A +L + M  KG +P++
Sbjct: 759 CNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDD 818

Query: 298 VTYNTLIHGLCLKGNLDKAVS 318
            TY+ L++G    GNL    S
Sbjct: 819 TTYDILVNGKVKDGNLFSGAS 839


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/496 (28%), Positives = 238/496 (47%), Gaps = 53/496 (10%)

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           N +   + PN  T+NL+++ +C+   V  A ++  EM  + C PD  TY T++  LCK +
Sbjct: 149 NMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLD 208

Query: 242 RLDEAVLLL------------------------------DEMQVDGCFPTPVTFNVLING 271
           RLDEA  +L                               +M   G  P  +T+  +++ 
Sbjct: 209 RLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDA 268

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            CK GEL  A  ++  M + GC PN VT+  L+ GL   G +  A+ +   MVA    P+
Sbjct: 269 FCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPS 328

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            V+Y  +I GL  +G     + +L SME+     N   YSTLI G  K G    A+ +W 
Sbjct: 329 TVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWN 388

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M   GCKPN VVY+ ++D  C+    ++A+ ++ +M+   C  N  T+++L++   +  
Sbjct: 389 DMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCR 448

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +  +A+ ++ +M ++ CV N   Y+ LIHGL  +G   +A  + T+M S G +  +V Y+
Sbjct: 449 RVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYN 508

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +++ GLC      EA+    +M+      QP+ FT++ +++A CK+  +  +  +L +M 
Sbjct: 509 TVVSGLCQTRMSREAMVFVGKMIV--QGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMN 566

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
              C  +++   I +  L  +        D L +    L K             ML + +
Sbjct: 567 VVNCHRNILVYTILMAELCNQ--------DKLVDAMTYLLK-------------MLYEGI 605

Query: 632 SPQTSTWERVVQELCR 647
            P T TW  +V+ + R
Sbjct: 606 YPNTVTWNVLVRGVFR 621



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 192/382 (50%), Gaps = 32/382 (8%)

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           C EN +   VL+ D M+ DG  P   T+N+L+  LC+N  +G A K++D M  KGC P++
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 298 VTYNTLIHGLCLKGNLDKAV------------------------------SLLDRMVASK 327
           VTY T++  LC    LD+A                               S++  MV   
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN +TY TI++   K G       +L  M       N   ++ L+ GLF +G+  DA+
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            +W+ M+ +G  P+TV Y+ LI GLC VG    A  IL  M  +GC  N  TYS+L+ GF
Sbjct: 315 DMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGF 374

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            ++G    A+ IW DM+++ C  N V Y+ ++   C+     +A+ +  +ML   C P+ 
Sbjct: 375 SKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNT 434

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V ++++I  LC+   V  AL +F+EM        P+  TYN L++ L ++ N   ++ ++
Sbjct: 435 VTFNTLIRSLCDCRRVGRALGVFHEM--RRHGCVPNGRTYNELIHGLFREGNCGDALHMV 492

Query: 568 NSMMDRGCDPDLVTCNIFLTAL 589
             M   G +  LVT N  ++ L
Sbjct: 493 TEMQSHGIELSLVTYNTVVSGL 514



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 200/421 (47%), Gaps = 3/421 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P   ++N ++  +CR   +     +  +M  R  +P++ TY T++D  CK   L  A  +
Sbjct: 222 PVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAI 281

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M + GC P  VTF  L+ GL  +G +  A  +   M  +G  P+ V+YN LI GLC 
Sbjct: 282 LARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCS 341

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+L  A S+L+ M    C PN  TY T+I+G  K G       +   M       N  +
Sbjct: 342 VGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVV 401

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ ++    K+     A  L  +M+ + C PNTV ++ LI  LC   +   A  +  EM 
Sbjct: 402 YTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMR 461

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            +GC  N  TY+ L+ G F  G    A+ +  +M  +    + V Y+ ++ GLC+    R
Sbjct: 462 RHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSR 521

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA +   +M+ +G +P+   +S++IH  C  G V  A  +   M  +      ++  Y I
Sbjct: 522 EAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVV--NCHRNILVYTI 579

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+  LC Q  +  ++  L  M+  G  P+ VT N+ +  +   L   +  +DF+  + + 
Sbjct: 580 LMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCIEP-SDFIQHITMN 638

Query: 610 L 610
           L
Sbjct: 639 L 639



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 189/398 (47%), Gaps = 23/398 (5%)

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C    +G    + DNM   G  PN  TYN L+  LC    +  A  +LD M    C P++
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY TI++ L KL R  +   VL +M           Y+ ++  L +E + ++   +   
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAAS-----YNAIVLALCREFRMQEVFSVVSD 249

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ +G +PN + Y+ ++D  C+ G+   A  IL  M+  GC  N  T+++L++G F+ G+
Sbjct: 250 MVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGR 309

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            H A+++W+ M       + V Y++LI GLC  G L+ A  +   M   GC P+V  YS+
Sbjct: 310 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 369

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I G   AG +  A+ ++N+M       +P+V  Y  +++  CK+   + +  L++ M+ 
Sbjct: 370 LIDGFSKAGDLGGAISIWNDMS--RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLL 427

Query: 573 RGCDPDLVTCNIFLTALKE---------------KLEAPQDGTDFLNELAIRLFKRQRTS 617
             C P+ VT N  + +L +               +     +G  + NEL   LF+     
Sbjct: 428 ENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTY-NELIHGLFREGNCG 486

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
               +V  M    +     T+  VV  LC+ +  + A+
Sbjct: 487 DALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 524



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 221/500 (44%), Gaps = 56/500 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L++    +    +   +L  M R+     + ++  I     K   ++EA  +   M
Sbjct: 161 TYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM 220

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                      S+N+++  + +E    R  E ++ + +     + PN +T+  ++   C+
Sbjct: 221 ------PPVAASYNAIVLALCRE---FRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCK 271

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A  +   M +  C P++ T+  L+ GL  + R+ +A+ +   M  +G  P+ V+
Sbjct: 272 AGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVS 331

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV------- 317
           +N+LI GLC  G+L  A+ ++++M   GC PN  TY+TLI G    G+L  A+       
Sbjct: 332 YNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMS 391

Query: 318 ----------------------------SLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
                                       SL+D+M+   C PN VT+ T+I  L    R  
Sbjct: 392 RSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVG 451

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               V   M       N   Y+ LI GLF+EG   DA+ +  +M   G + + V Y+ ++
Sbjct: 452 RALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVV 511

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GLC+     EA   + +MI  G   NAFT+S+++  + + G+   A  +   M   NC 
Sbjct: 512 SGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCH 571

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N + Y++L+  LC   KL +A     +ML  G  P+ V ++ ++ G            +
Sbjct: 572 RNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG------------V 619

Query: 530 FNEMLCLEPKSQPDVFTYNI 549
           F  + C+EP       T N+
Sbjct: 620 FRNLGCIEPSDFIQHITMNL 639


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 231/419 (55%), Gaps = 5/419 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           + N+++  +  +G   +AL F++ ++ A+   +  N +++  +I  VC++G    AI+L 
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLL-AQGFQL--NQVSYATLINGVCKIGDTRGAIKLL 187

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R++  R  +P++  Y T++D LCK   + EA  L  EM V G     VT++ LI G C  
Sbjct: 188 RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIE 247

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A  L++ M LK   PN  TYN L+  LC +G + +A S+L  M+ +   P+ +TY
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G   +        V  +M       + + Y+ LI+G  K    ++A+ L+K+M +
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P  V YS+LIDGLC+ G+     +++ EM + G  A+  TYSSL+ G  ++G   +
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDR 427

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ ++  M       N   +++L+ GLC+ G+L++A+ V+  +L++G   +V  Y+ MI+
Sbjct: 428 AIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIN 487

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           G C  G +EEAL + ++M   +    P+ FT+  ++ AL K+     +  LL  M+ RG
Sbjct: 488 GHCKQGLLEEALTMLSKM--EDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 234/455 (51%), Gaps = 6/455 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++A+  F+ M+   H    ++ FN +L+   +   Y  A+   +H +  K   I P+ +
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQ-FNKILDSFAKMKHYSTAVSL-SHRLELK--GIQPDLI 95

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I   C +G +     +  ++  R   PD  T  TL+ GLC + ++ +A+   D++
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKL 155

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G     V++  LING+CK G+   A KL+  +  +   PN   Y+T+I  LC    +
Sbjct: 156 LAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLV 215

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L   M       + VTY T+I G    G+  +   +L  M  +  + N Y Y+ L
Sbjct: 216 SEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEGK ++A  +   M++   KP+ + YS L+DG   V +  +A+ +   M   G 
Sbjct: 276 VDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGV 335

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY+ L+ GF ++    +A+ ++K+M + N V   V YS LI GLC+ G++     
Sbjct: 336 TPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWD 395

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  +M  RG   DV+ YSS+I GLC  G ++ A+ LFN+M   + + +P++FT+ ILL+ 
Sbjct: 396 LIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKM--KDQEIRPNIFTFTILLDG 453

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           LCK   +  + ++   ++ +G   ++ T N+ +  
Sbjct: 454 LCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMING 488



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 163/345 (47%), Gaps = 23/345 (6%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           N+D AVS  +RM+  +  P  + +  I++   K+        +   +E +    +    +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+     G+      +  +++++G  P+TV  + LI GLC  G+  +A     +++  
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  +Y++L+ G  + G    A+++ + +       N   YS +I  LC+   + EA
Sbjct: 159 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 218

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++++M  +G   DVV YS++I+G C  G ++EA+ L NEM+       P+V+TYNIL+
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVL--KTINPNVYTYNILV 276

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           +ALCK+  +  +  +L  M+     PD++T +  +           DG   + E+     
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM-----------DGYFLVYEVK---- 321

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           K Q       ++ V      +P   T+  ++   C+ K +  A+N
Sbjct: 322 KAQHVFNAMSLMGV------TPDVHTYTILINGFCKNKMVDEALN 360



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 82/141 (58%), Gaps = 3/141 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +++S+++ + + G   RA+  +N +   K   I PN  TF +++  +C+ G + +A +
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKM---KDQEIRPNIFTFTILLDGLCKGGRLKDAQE 465

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F+++  +    ++YTY  +++G CK+  L+EA+ +L +M+ +GC P   TF  +I  L 
Sbjct: 466 VFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALF 525

Query: 274 KNGELGRAAKLVDNMFLKGCL 294
           K  E  +A KL+  M  +G L
Sbjct: 526 KKDENDKAEKLLRQMIARGLL 546


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/435 (31%), Positives = 223/435 (51%), Gaps = 23/435 (5%)

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA 281
           N  P I+ +  ++  L K N    A+ L  EM+ +G     VTFN+LIN   + G    +
Sbjct: 51  NPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFS 110

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
             +  N+  KG  PN +T  TLI GLCLKG + +A+   D++VA     N+V YGT+ING
Sbjct: 111 FSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLING 170

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L K+G+     ++L  ++ +    N  +Y+T+I  + K     +A  L+ +M+ KG  P+
Sbjct: 171 LCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPD 230

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V YSALI G C +GK ++A  +  +MI+     + +T+S L+ GF + G+  +A  +  
Sbjct: 231 VVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLA 290

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            M K     + V Y  L+ G C   ++ +A+ ++  M   G   +V +Y+ MI+G C   
Sbjct: 291 MMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIK 350

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            V+EA+ LF EM C      PDV TYN L++ LCK   IS+++ L++ M DRG   D +T
Sbjct: 351 KVDEAMNLFKEMHC--KNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKIT 408

Query: 582 CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
            N  L AL +  +  +         AI L  + +  G            + P   T+  +
Sbjct: 409 YNSILDALCKNHQVDK---------AIALLTKMKDEG------------IQPDMYTYTIL 447

Query: 642 VQELCRPKRIQAAIN 656
           +  LC+  R++ A N
Sbjct: 448 IDGLCKGGRLKDAQN 462



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 262/553 (47%), Gaps = 69/553 (12%)

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNV---------------IIQEGLYHRALEFYNHIVNA 183
           +L H   D+ H    V SFN +LN+               +++   Y  A+  +  +   
Sbjct: 28  QLHHHHQDDEH--SLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREM--- 82

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   I  + +TFN++I    +LG    +  +F  +  +  EP+  T  TL+ GLC + ++
Sbjct: 83  EFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQI 142

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +A+   D++   G     V +  LINGLCK G+   A +L+  +  K   PN V YNT+
Sbjct: 143 HQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTI 202

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  +C    +++A  L   MV+    P+ VTY  +I+G   LG+  D   +   M   + 
Sbjct: 203 IDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEI 262

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
           + + Y +S L+ G  KEG+ ++A  +   MM++G KP+ V Y +L+DG C V + ++A+ 
Sbjct: 263 NPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKS 322

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           I   M   G  AN  +Y+ ++ GF +  K  +A+ ++K+M   N + + V Y+ LI GLC
Sbjct: 323 IFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLC 382

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK+  A  +  +M  RG   D + Y+S++  LC    V++A+ L  +M   +   QPD
Sbjct: 383 KSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM--KDEGIQPD 440

Query: 544 VFTYNILLNALCKQSNI-----------------------------------SHSIDLLN 568
           ++TY IL++ LCK   +                                     ++ LL+
Sbjct: 441 MYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLS 500

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG---GFKIVEV 625
            M D GC P+  T  I + +L EK E         N++A +L +     G   G+K    
Sbjct: 501 KMEDNGCIPNAKTYEIIILSLFEKDE---------NDMAEKLLREMIARGLLFGWKKAYC 551

Query: 626 MLQKFLSPQTSTW 638
           +  +F   +++ +
Sbjct: 552 LFTRFFQRRSNLY 564



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/340 (28%), Positives = 176/340 (51%), Gaps = 4/340 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  +  K  LV EA  L+  MV +      V +++++++     G  + A+  +N +++ 
Sbjct: 202 IIDSMCKVKLVNEAFDLYSEMVSK-GISPDVVTYSALISGFCILGKLNDAIGLFNKMISE 260

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   I P+  TF++++   C+ G V  A  +   M  +  +PD+ TYC+LMDG C   ++
Sbjct: 261 E---INPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQV 317

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           ++A  + + M   G      ++N++ING CK  ++  A  L   M  K  +P+ VTYN+L
Sbjct: 318 NKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSL 377

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I GLC  G +  A+ L+D M       +++TY +I++ L K  +      +L  M++   
Sbjct: 378 IDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 437

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             + Y Y+ LI GL K G+ +DA  +++ ++ KG       Y+ +I G C     D+A  
Sbjct: 438 QPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALA 497

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           +L +M +NGC  NA TY  ++   FE  +   A ++ ++M
Sbjct: 498 LLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREM 537


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 248/495 (50%), Gaps = 46/495 (9%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++F++++V ++        +  N VI    R+   D AI L+R+M +R    +IY++  
Sbjct: 90  AIDFFDYMVRSRP---FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA----------A 282
           L+   C  ++L  ++    ++   G  P  VTFN L++GLC    +  A           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
            L D M   G  P  +T+NTLI+GLCL+G + +A +L+++MV      + VTYGTI+NG+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K+G       +L  MEE     +  IYS +I  L K+G   DA  L+ +M+EKG  PN 
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
             Y+ +IDG C  G+  +A+ +L +MI      +  T+++L+    + GK  +A ++  +
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 386

Query: 463 MAKNNCVY-NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           M  + C++ + V Y+ +I+G C+  +  +A+ ++  M S    PDVV ++++I   C A 
Sbjct: 387 ML-HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAK 441

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            V+E ++L  E+         +  TYN L++  C+  N++ + DL   M+  G  PD +T
Sbjct: 442 RVDEGMQLLREI--SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 499

Query: 582 CNIFLTAL--KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
           CNI L      EKLE            A+ LF            EV+    +   T  + 
Sbjct: 500 CNILLYGFCENEKLEE-----------ALELF------------EVIQMSKIDLDTVAYN 536

Query: 640 RVVQELCRPKRIQAA 654
            ++  +C+  ++  A
Sbjct: 537 IIIHGMCKGSKVDEA 551



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 248/500 (49%), Gaps = 53/500 (10%)

Query: 134 VEEAIRLFHTMVDE--FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP- 190
           +++AI  F  MV    F+   T    N V+ V ++      A+  Y  +     +  +P 
Sbjct: 87  LDDAIDFFDYMVRSRPFY---TAVDCNKVIGVFVRMNRPDVAISLYRKM----EIRRIPL 139

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  +FN++IK  C    +  ++  F ++     +PD+ T+ TL+ GLC E+R+ EA+ L 
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199

Query: 251 ----------DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
                     D+M   G  P  +TFN LINGLC  G +  AA LV+ M  KG   + VTY
Sbjct: 200 GYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 259

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
            T+++G+C  G+   A++LL +M  +   P+ V Y  II+ L K G   D   +   M E
Sbjct: 260 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 319

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    N + Y+ +I G    G+  DA +L + M+E+   P+ + ++ALI    + GK  E
Sbjct: 320 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 379

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGF-----FESGKG---------------------- 453
           AE++  EM++     +  TY+S++ GF     F+  K                       
Sbjct: 380 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCR 439

Query: 454 ----HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
                + +++ +++++   V N   Y+ LIHG CE   L  A+ ++ +M+S G  PD + 
Sbjct: 440 AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 499

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
            + +++G C    +EEAL+LF E++ +  K   D   YNI+++ +CK S +  + DL  S
Sbjct: 500 CNILLYGFCENEKLEEALELF-EVIQM-SKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 557

Query: 570 MMDRGCDPDLVTCNIFLTAL 589
           +   G +PD+ T N+ ++  
Sbjct: 558 LPIHGVEPDVQTYNVMISGF 577



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/491 (29%), Positives = 242/491 (49%), Gaps = 19/491 (3%)

Query: 106 LYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           LYR    +R+ L   SF  + K +   H +  ++  F  +  +   +  V +FN++L+ +
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT-KLGFQPDVVTFNTLLHGL 186

Query: 165 IQEGLYHRALEFYNHIVNAK-------HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
             E     AL  + ++V           + + P  +TFN +I  +C  G V  A  L  +
Sbjct: 187 CLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNK 246

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M  +    D+ TY T+++G+CK      A+ LL +M+     P  V ++ +I+ LCK+G 
Sbjct: 247 MVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH 306

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
              A  L   M  KG  PN  TYN +I G C  G    A  LL  M+  +  P+ +T+  
Sbjct: 307 HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNA 366

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I+  VK G+  +  ++   M  R    +   Y+++I G  K  + +DA    K M +  
Sbjct: 367 LISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLM 422

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P+ V ++ +ID  CR  + DE  ++L E+   G  AN  TY++L+ GF E    + A 
Sbjct: 423 ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ 482

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           +++++M  +    + +  ++L++G CE+ KL EA  ++  +       D VAY+ +IHG+
Sbjct: 483 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGM 542

Query: 518 CNAGSVEEALKLFNEMLCLEP--KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           C    V+EA  LF    C  P    +PDV TYN++++  C +S IS +  L + M D G 
Sbjct: 543 CKGSKVDEAWDLF----CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 598

Query: 576 DPDLVTCNIFL 586
           +PD  T N  +
Sbjct: 599 EPDNSTYNTLI 609



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 230/457 (50%), Gaps = 18/457 (3%)

Query: 134 VEEAIRLFHTMVD---------EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
           + EA+ LF  MV+         E      V +FN+++N +  EG    A    N +V  K
Sbjct: 192 ISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GK 250

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
            ++I  + +T+  ++  +C++G   +A+ L  +M   + +PD+  Y  ++D LCK+    
Sbjct: 251 GLHI--DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHS 308

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +A  L  EM   G  P   T+N +I+G C  G    A +L+ +M  +   P+ +T+N LI
Sbjct: 309 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALI 368

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
                +G L +A  L D M+     P+ VTY ++I G  K  R  D   +   M      
Sbjct: 369 SASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP--- 425

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   ++T+I    +  + ++ M+L +++  +G   NT  Y+ LI G C V   + A+++
Sbjct: 426 -DVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL 484

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             EMI++G   +  T + L+ GF E+ K  +A+E+++ +  +    + V Y+++IHG+C+
Sbjct: 485 FQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCK 544

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             K+ EA  ++  +   G +PDV  Y+ MI G C   ++ +A  LF++M   +   +PD 
Sbjct: 545 GSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK--DNGHEPDN 602

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            TYN L+    K   I  SI+L++ M   G   D  T
Sbjct: 603 STYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 639



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 186/398 (46%), Gaps = 41/398 (10%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           + A+ L   M +E H K  V  ++++++ + ++G +  A   ++ ++      I PN  T
Sbjct: 273 KSALNLLSKM-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK---GIAPNVFT 328

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I   C  G   +A +L R+M  R   PD+ T+  L+    KE +L EA  L DEM 
Sbjct: 329 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 388

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF------------------------- 289
               FP  VT+N +I G CK+     A  + D M                          
Sbjct: 389 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 448

Query: 290 ------LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
                  +G + N  TYNTLIHG C   NL+ A  L   M++    P+ +T   ++ G  
Sbjct: 449 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 508

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           +  +  +   +   ++  K  ++   Y+ +I G+ K  K ++A  L+  +   G +P+  
Sbjct: 509 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 568

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y+ +I G C      +A  +  +M +NG   +  TY++L++G  ++G+  K++E+  +M
Sbjct: 569 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 628

Query: 464 AKNNCVYNEVCYSV-LIHGLCEDGKLREARMVWTQMLS 500
             N   ++   +++ ++  L  DG+L ++   ++ MLS
Sbjct: 629 RSNG--FSGDAFTIKMVADLITDGRLDKS---FSDMLS 661


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/432 (30%), Positives = 232/432 (53%), Gaps = 13/432 (3%)

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           +V+      T+ ++N+++N   + G    A    + +  A      P+T T+N +I+ +C
Sbjct: 118 VVEALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVPFA------PDTFTYNPLIRALC 171

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G V +A+ +F +M  R C P + TY  L+D  CKE+   +AV+LLDEM+  GC P  V
Sbjct: 172 VRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIV 231

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+NVLIN +C  G++G A K+++++   GC P+ VTY  ++  LC     ++A  LL +M
Sbjct: 232 TYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKM 291

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            ++ C P+EVT+  +I  L + G      +VL  M E     +   YS+++ GL KE + 
Sbjct: 292 FSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRV 351

Query: 384 EDAMKLWK----QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           ++A+KL K    +M+ K C P+ V ++ +I  LC+ G  D A +++ EM  +GC  +  T
Sbjct: 352 DEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITT 411

Query: 440 YSSLMKGFF-ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           Y+ ++ GF  +S K  +A+++   M  N    +   Y  L  GL  + ++  A  ++ ++
Sbjct: 412 YNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRV 471

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
            + G  PD + Y++++ GLC     + A+  F  M  +     PD  TY IL+  +  + 
Sbjct: 472 QAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYM--VSNGCMPDESTYIILVEGIAYEG 529

Query: 559 NISHSIDLLNSM 570
            +  + +LL ++
Sbjct: 530 FLEEAKELLGNL 541



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 215/402 (53%), Gaps = 10/402 (2%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T+N ++   CR G +D A ++   +P     PD +TY  L+  LC    + +A+ + D+
Sbjct: 129 ITYNTMVNGYCRAGNIDAARRMIDSVPF---APDTFTYNPLIRALCVRGCVLDALAVFDD 185

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   GC P+ VT+++L++  CK     +A  L+D M  KGC P+ VTYN LI+ +C +G+
Sbjct: 186 MLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGD 245

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           + +A+ +L+ + +  C P+ VTY  ++  L    R  +  ++L  M       +E  ++ 
Sbjct: 246 VGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNA 305

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA----EEILFEM 428
           +I+ L ++G    A K+  QM E GC P+ + YS+++DGLC+  + DEA    +E+L EM
Sbjct: 306 VITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEM 365

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG-LCEDGK 487
           ++  C  +  T+++++    + G   +A+++  +M+++ C+ +   Y+ ++ G LC+  K
Sbjct: 366 VSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCK 425

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
             EA  +   M+S G  PD   Y S+  GL     +E A+ +F  +  +     PD   Y
Sbjct: 426 TEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAM--GLSPDKMLY 483

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           N +L  LCK+     +ID    M+  GC PD  T  I +  +
Sbjct: 484 NAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGI 525



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 216/441 (48%), Gaps = 29/441 (6%)

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           GL +   LD A+ L+  +   G  P  +  N+LI  LC +G +  A ++V+ +   G   
Sbjct: 70  GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GPSA 126

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
             +TYNT+++G C  GN+D A  ++D +  +   P+  TY  +I  L   G  +D   V 
Sbjct: 127 TIITYNTMVNGYCRAGNIDAARRMIDSVPFA---PDTFTYNPLIRALCVRGCVLDALAVF 183

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M  R    +   YS L+    KE   + A+ L  +M  KGC+P+ V Y+ LI+ +C  
Sbjct: 184 DDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQ 243

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G   EA ++L  + + GC  +A TY+ ++K    S +  +A ++   M  N+C  +EV +
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTF 303

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + +I  LC+ G +  A  V  QM   GC PD++ YSS++ GLC    V+EA+KL  E+L 
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLA 363

Query: 536 --LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             +     PD  T+N ++ +LC++     +I +++ M + GC PD+ T N  +     K 
Sbjct: 364 EMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKS 423

Query: 594 EAPQDGTDFLN---------------ELAIRLFKR---QRTSGGFKIVEVMLQKFLSPQT 635
              ++  D LN                LA  L +    +R  G F+ V+ M    LSP  
Sbjct: 424 CKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAM---GLSPDK 480

Query: 636 STWERVVQELCRPKRIQAAIN 656
             +  ++  LC+  R   AI+
Sbjct: 481 MLYNAILLGLCKKWRTDLAID 501


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 148/497 (29%), Positives = 246/497 (49%), Gaps = 20/497 (4%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL  +N ++   HM+  P+T+ FN ++ ++ +         L  +M      PD+YT   
Sbjct: 53  ALSSFNRML---HMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C  NRL  A  +L ++   G  P   TF  LI GLC  G++G A  L D M  +G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN VTY TLI+GLC  GN + A+ LL  M    C P+ V Y +II+ L K  +  +  
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M  +    + + Y++LI  L    + +    L  QM+     P+ V++S ++D L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ GK  EA +++  MI  G   N  TY++LM G     +  +AV+++  M  N    N 
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 349

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           + Y+ LI+G C+  ++ +A  ++ +M  +   P+ V Y++++H  C+ G +++A+ LF+E
Sbjct: 350 ISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHE 408

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--K 590
           M  +     PD+ TY ILL+ LCK+S++  ++ LL ++     DPD+    I +  +   
Sbjct: 409 M--VAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRA 466

Query: 591 EKLEAPQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
            +LEA +D    L+   +R            L +R       K+   M     SP   T+
Sbjct: 467 GELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTY 526

Query: 639 ERVVQELCRPKRIQAAI 655
             + Q L + K    AI
Sbjct: 527 NTITQGLLQNKEALRAI 543



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 154/566 (27%), Positives = 262/566 (46%), Gaps = 49/566 (8%)

Query: 71  NSTPKLGSYQLGDSTFYSLIQH---YANSGDFKSLEMVLYRMRREKRVVLEKS---FIFI 124
           +S P  G+  L    ++S + H   ++ S +F +L+  L    R   +    S   F  +
Sbjct: 16  SSPPGFGTCVLSLPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRL 75

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             +  K         L + M D F     V + N ++N          A      I+   
Sbjct: 76  LTSIAKTKQYPTVFSLSNQM-DSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLG 134

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
           H    P+T TF  +I+ +C  G + +A+ LF +M     +P++ TY TL++GLCK    +
Sbjct: 135 HQ---PDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            A+ LL  M+   C P  V +  +I+ LCK+ ++  A  L   M  +G  P+  TY +LI
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 251

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           H LC         +LL++M+ SK MP+ V + T+++ L K G+  +   V+  M  R   
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 311

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            N   Y+ L+ G   + + ++A+K++  M+  G  PN + Y+ LI+G C++ + D+A  +
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 371

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK---------DMAKNNCVYNEVC- 474
             EM       N  TY++LM      G+   A+ ++          D+A    + + +C 
Sbjct: 372 FEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 430

Query: 475 -------------------------YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
                                    Y+++I G+C  G+L  AR +++ + S+G +P+V  
Sbjct: 431 KSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRT 490

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ MI+GLC  G ++EA KLF EM        PD  TYN +   L +      +I LL  
Sbjct: 491 YTIMINGLCRRGLLDEANKLFMEMD--GNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 548

Query: 570 MMDRGCDPDLVTCNIFLTAL-KEKLE 594
           M+ RG   D+ T  + +  L  +KL+
Sbjct: 549 MLARGFSADVSTTTLLVEMLCDDKLD 574



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 223/470 (47%), Gaps = 6/470 (1%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           F+  +     KLG +Q   +TF +LI+     G       +  +M  E       ++  +
Sbjct: 122 FAFSVLAKILKLG-HQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTL 180

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
                K      AIRL  +M ++ +C+  V  + S+++ + ++     A   ++ +V   
Sbjct: 181 INGLCKVGNTNAAIRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ- 238

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              I P+  T+  +I ++C L    +   L  +M      PD+  + T++D LCKE ++ 
Sbjct: 239 --GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 296

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  ++D M + G  P  VT+N L++G C   E+  A K+ D M   G  PN ++YNTLI
Sbjct: 297 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +G C    +DKA  L + M   + +PN VTY T+++    +GR  D   +   M      
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQI 415

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y  L+  L K+   ++AM L K +      P+  +Y+ +IDG+CR G+ + A +I
Sbjct: 416 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              + + G   N  TY+ ++ G    G   +A +++ +M  N C  +   Y+ +  GL +
Sbjct: 476 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           + +   A  +  +ML+RG   DV   + ++  LC+    +   ++ +E +
Sbjct: 536 NKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSEFV 585


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 143/508 (28%), Positives = 239/508 (47%), Gaps = 35/508 (6%)

Query: 117 LEKSFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           L  + IF  + K    A  V+EA  +    + EF C   V S+N +L  +  E     AL
Sbjct: 125 LNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEAL 184

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E  + + +    +  PN +T+  VI  +C+  +VD A  +F+ M  +   P+ +TY  L+
Sbjct: 185 ELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLI 244

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            G     +  E V +L EM   G  P  V + VL++ LCKNG    A  + D++  KG  
Sbjct: 245 HGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIK 304

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+   Y  L+HG   +G L +  S LD MV +   P+   +  + N   K     +   +
Sbjct: 305 PHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHI 364

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M ++        Y  LI  L K G+ +DA+  + QM+ +G  P+  V+S+L+ GLC 
Sbjct: 365 FDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCT 424

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           V K ++AE++ FE+++ G   NA  ++ LM      G+  +A  +   M + +   + + 
Sbjct: 425 VDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVIS 484

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ L+ G C  G++ EA  +   M+S G KPD   Y++++HG C A  +++A  LF EML
Sbjct: 485 YNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREML 544

Query: 535 C--LEP-------------------------------KSQPDVFTYNILLNALCKQSNIS 561
              L P                               + + D++TY I+LN LC+ + + 
Sbjct: 545 MKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVD 604

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +  +  S+  +    D+ T NI + AL
Sbjct: 605 EAFKMFQSLCSKDLQLDIFTINIMIGAL 632



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/563 (25%), Positives = 263/563 (46%), Gaps = 44/563 (7%)

Query: 109 MRREKRVV------LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN 162
           M R +RV       LE   +   +A   +  +++A++LF  M+  +    +V++FN +L 
Sbjct: 1   MSRSRRVTAAADRCLELERVIAGRARSGSLGLDDALKLFDEML-TYARPASVRTFNRLLT 59

Query: 163 VIIQ---EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           V+ +          +  +N ++    + + P++ T+ ++I   CR+G + +    F  + 
Sbjct: 60  VVSRARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLIL 119

Query: 220 VRNCE-PDIYTYCTLMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
                  +   +  L+ GLC   R+DEA  +LL  M   GC    +++N+L+ GLC    
Sbjct: 120 KTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKR 179

Query: 278 LGRAAKLVDNMFLKG---CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
              A +L+  M   G     PN VTY T+I GLC    +D+A  +   M+     PN  T
Sbjct: 180 AEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHT 239

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y  +I+G +  G+  +  ++L  M       +  IY+ L+  L K G+  +A  ++  ++
Sbjct: 240 YTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLI 299

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            KG KP+  +Y  L+ G    G   E    L  M+ NG + +   ++ +   + +     
Sbjct: 300 RKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMID 359

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A+ I+  M +       V Y  LI  LC+ G++ +A + + QM++ G  PD+  +SS++
Sbjct: 360 EAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLV 419

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +GLC     E+A KLF E+L  +   + +   +NIL+  LC++  +  +  L++ M+   
Sbjct: 420 YGLCTVDKWEKAEKLFFEVL--DQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVD 477

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDG---TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
             PD+++ N  +           DG   T  ++E A             K+++VM+   L
Sbjct: 478 VRPDVISYNTLV-----------DGHCLTGRIDEAA-------------KLLDVMVSIGL 513

Query: 632 SPQTSTWERVVQELCRPKRIQAA 654
            P   T+  ++   C+ +RI  A
Sbjct: 514 KPDEFTYNTLLHGYCKARRIDDA 536



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 232/481 (48%), Gaps = 6/481 (1%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + T+  LI  Y ++G +K +  +L  M           +  +     K     EA  +F 
Sbjct: 237 NHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFD 296

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +++ +   K  V  +  +L+    EG       F + +V      + P+   FN++    
Sbjct: 297 SLIRK-GIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRN---GVSPDHHIFNIMFNAY 352

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            +  ++D A+ +F +M  +   P +  Y  L+D LCK  R+D+AVL  ++M  +G  P  
Sbjct: 353 AKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDI 412

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             F+ L+ GLC   +  +A KL   +  +G   N   +N L+  LC +G + +A  L+D 
Sbjct: 413 FVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDL 472

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+     P+ ++Y T+++G    GR  + A++L  M       +E+ Y+TL+ G  K  +
Sbjct: 473 MLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARR 532

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +DA  L+++M+ KG  P  V Y+ ++ GL ++G+  EA+E+   MINN    + +TY+ 
Sbjct: 533 IDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTI 592

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G   +    +A ++++ +   +   +    +++I  L + G+  +A  ++  + + G
Sbjct: 593 ILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYG 652

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             PDV  Y  +   L   GS+EE  +LF+ M   E  + P+    N L+  L  + +I  
Sbjct: 653 LVPDVETYRLIAENLIKEGSLEELDELFSAM--EENGTAPNSRMLNALVRWLLHRGDIGR 710

Query: 563 S 563
           +
Sbjct: 711 A 711



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 182/404 (45%), Gaps = 38/404 (9%)

Query: 268 LINGLCKNGELG--RAAKLVDNMFLKGCLPNEVTYNTLI----HGLCLKGNLDKAVSLLD 321
           +I G  ++G LG   A KL D M       +  T+N L+       C   + +  VSL +
Sbjct: 20  VIAGRARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSAS-ELVVSLFN 78

Query: 322 RMV---ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE-YIYSTLISGL 377
           RM+   + K  P+  TY  +I    ++GR   G      + +  + +N   I+  L+ GL
Sbjct: 79  RMIRECSVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGL 138

Query: 378 FKEGKAEDAMK-LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA- 435
               + ++A   L ++M E GC  N + Y+ L+ GLC   + +EA E++  M ++G  + 
Sbjct: 139 CDAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSH 198

Query: 436 --NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  TY++++ G  ++    +A  +++ M       N   Y+ LIHG    GK +E   
Sbjct: 199 TPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQ 258

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  +M + G +PD V Y+ ++  LC  G   EA  +F+ ++      +P V  Y ILL+ 
Sbjct: 259 MLQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLI--RKGIKPHVTIYGILLHG 316

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
              +  +S     L+ M+  G  PD    NI   A  +K    +         A+ +F +
Sbjct: 317 YATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDE---------AMHIFDK 367

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
            R            Q++LSP    +  ++  LC+  R+  A+ K
Sbjct: 368 MR------------QQWLSPGVVNYGALIDALCKLGRVDDAVLK 399


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 158/611 (25%), Positives = 273/611 (44%), Gaps = 65/611 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI     SGD  + + +L +M          ++  +     KA    +AI+    M
Sbjct: 12  TYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRM 71

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C+  + ++NS+++ +        A      +V        PN +T++ ++   CR
Sbjct: 72  L-RSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELV---RNGFAPNHITYSTLVIWNCR 127

Query: 205 LGLVDNAIQLFREMPVRN---------------CE----------------------PDI 227
              +D A  L REM +R                CE                      PD+
Sbjct: 128 RRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDV 187

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            TY T + GLCK  +LD+ + +L+EM   G  P  VTF  +I+GLCK   +  A ++   
Sbjct: 188 VTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKG 247

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK--CMPNEVTYGTIINGLVKL 345
           M  +GC+P+ +TY+ ++  L     LD    +L+ M A K  C+    T+   I  L + 
Sbjct: 248 MLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRS 307

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC-KPNTVV 404
           G+      +L+ M E     N   Y+ +I GL K G  +DA KL ++M++ GC KP+ + 
Sbjct: 308 GKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIF 367

Query: 405 YSALIDGLCRVGKPDEAEEILFEM-INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           ++ LI G C+ G+  +A ++L EM   N C  +  TY++L+ G  + G   +A  + ++M
Sbjct: 368 FNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEM 427

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
               C  N V Y+ LI+G  + G   EA  ++ +M ++GC PD++ Y++++     AG +
Sbjct: 428 QAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMM 487

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            +A  ++ ++        PD  TY IL++  C+  +    + LL  M  RG   D  T N
Sbjct: 488 SKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYN 547

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           + +  L E  E P                    S    + + ML +   P  S +  +V+
Sbjct: 548 VLIAKLAETEEVP--------------------SKALAVYQQMLDQDCVPSASIFNSLVR 587

Query: 644 ELCRPKRIQAA 654
              R   + +A
Sbjct: 588 LFLRTGDVNSA 598



 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/438 (31%), Positives = 231/438 (52%), Gaps = 17/438 (3%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V ++ ++++ + + G    A      + +A      PN +T+  +I  +C+     +AI
Sbjct: 9   SVVTYTTLIDGLCKSGDLDAAQALLQKMADA---GCAPNVVTYTALIDGLCKARRPHDAI 65

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           Q  + M    CEPD+ TY +L+ GLC  NR+D+A L+L E+  +G  P  +T++ L+   
Sbjct: 66  QTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWN 125

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL--DRMVASKCMP 330
           C+   L +A  L+  M L+G + N V Y   I G C              D M+ S  +P
Sbjct: 126 CRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIP 185

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + VTY T I+GL K G+   G  +L  M+      +   + ++ISGL K  + +DA +++
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVF 245

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM--INNGCAANAFTYSSLMKGFF 448
           K M+E+GC P+++ YS ++D L R  + D  +E+L  M  +  GC    +T+++ +    
Sbjct: 246 KGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALC 305

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG-CKPDV 507
            SGK   A  I   M ++  + N + Y+ +I GLC+ G + +A  +  +ML  G CKPDV
Sbjct: 306 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 365

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           + ++++I G C AG + +A +L  EM    +C+     PDV TYN L++   K  ++  +
Sbjct: 366 IFFNTLISGFCKAGRLSQAHQLLIEMKAKNICV-----PDVVTYNTLIDGQSKFGSLKQA 420

Query: 564 IDLLNSMMDRGCDPDLVT 581
             LL  M   GC P++VT
Sbjct: 421 KLLLQEMQAVGCKPNVVT 438



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 218/428 (50%), Gaps = 12/428 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++N+ ++ + + G   + LE    +       I P+ +TF  +I  +C+   +D+A Q
Sbjct: 187 VVTYNTFISGLCKAGKLDKGLEMLEEM---DRGGIPPDVVTFCSIISGLCKANRIDDAFQ 243

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV--DGCFPTPVTFNVLING 271
           +F+ M  R C PD  TY  ++D L + NRLD    +L+ MQ    GC     T N  I  
Sbjct: 244 VFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGA 303

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM-P 330
           LC++G+   A  ++  M   G LPN ++YN +I GLC  GN+D A  L  +M+ S C  P
Sbjct: 304 LCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKP 363

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI-YSTLISGLFKEGKAEDAMKL 389
           + + + T+I+G  K GR     ++L+ M+ +   V + + Y+TLI G  K G  + A  L
Sbjct: 364 DVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLL 423

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            ++M   GCKPN V Y+ALI+G  + G  +EAE +  EM   GC  +  TY++++  F +
Sbjct: 424 LQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSK 483

Query: 450 SGKGHKAVEIWKDMAKNN--CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
           +G   KA  +++ +      C  + + Y +LI G C      +   +  +M +RG   D 
Sbjct: 484 AGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDS 543

Query: 508 VAYSSMIHGLCNAGSV-EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
             Y+ +I  L     V  +AL ++ +M  L+    P    +N L+    +  +++ +  +
Sbjct: 544 YTYNVLIAKLAETEEVPSKALAVYQQM--LDQDCVPSASIFNSLVRLFLRTGDVNSARSM 601

Query: 567 LNSMMDRG 574
           +  M ++G
Sbjct: 602 VQEMNEKG 609



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/410 (30%), Positives = 199/410 (48%), Gaps = 43/410 (10%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M     +  + TY TL+DGLCK   LD A  LL +M   GC P  VT+  LI+GLCK   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
              A + V  M   GC P+ VTYN+LIHGLC+   +D A  +L  +V +   PN +TY T
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 338 IINGLVKLGRAVDGARVLM--------------------SMEERKFHVNEY--------- 368
           ++    +  R +D AR L+                       E +   + Y         
Sbjct: 121 LVIWNCRR-RRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMI 179

Query: 369 ---------IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                     Y+T ISGL K GK +  +++ ++M   G  P+ V + ++I GLC+  + D
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRID 239

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA--KNNCVYNEVCYSV 477
           +A ++   M+  GC  ++ TYS ++     + +     E+ + M   K  CV     ++ 
Sbjct: 240 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNA 299

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
            I  LC  GK   A+ +   M+  G  P++++Y+ +I GLC +G+V++A KL  +ML   
Sbjct: 300 FIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML-DS 358

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG-CDPDLVTCNIFL 586
              +PDV  +N L++  CK   +S +  LL  M  +  C PD+VT N  +
Sbjct: 359 GCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLI 408



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 151/294 (51%), Gaps = 6/294 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+N V++ + + G    A +    ++++      P+ + FN +I   C+ G +  A QL 
Sbjct: 331 SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK--PDVIFFNTLISGFCKAGRLSQAHQLL 388

Query: 216 REMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
            EM  +N C PD+ TY TL+DG  K   L +A LLL EMQ  GC P  VT+  LING  K
Sbjct: 389 IEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAK 448

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV--ASKCMPNE 332
           +G    A  L D M  KGC P+ +TYNT++      G + KA  +  ++    S C P+ 
Sbjct: 449 HGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDA 508

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK-EGKAEDAMKLWK 391
           +TY  +I+G  +      G  +L  M  R +  + Y Y+ LI+ L + E     A+ +++
Sbjct: 509 ITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQ 568

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           QM+++ C P+  ++++L+    R G  + A  ++ EM   G   +A    +L K
Sbjct: 569 QMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDASNLEALNK 622



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 2/92 (2%)

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M + G    VV Y+++I GLC +G ++ A  L  +M   +    P+V TY  L++ LCK 
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA--DAGCAPNVVTYTALIDGLCKA 58

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                +I  +  M+  GC+PDLVT N  +  L
Sbjct: 59  RRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGL 90


>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 147/445 (33%), Positives = 237/445 (53%), Gaps = 12/445 (2%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K +++S  ++  ++I   + H  ++  + ++ ++H +   +   F+LV +T+  LGL++N
Sbjct: 43  KPSLQSVPAIARILITAKM-HPQIDHLHQLLLSQHRD-FAHPSGFSLV-RTLADLGLLEN 99

Query: 211 AIQLFREMPVR--NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           AI  FR +  R  +  P I  Y  L     KE+R+D  + L  +M V    P   TFN+L
Sbjct: 100 AISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLL 159

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+ LC+ G L  A ++ D M  KGC PNE +   L+ G C  G     + LLD M +S  
Sbjct: 160 ISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGA 219

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
           +PN V Y T+I+ L   G+ V+  +++  M E     +   ++  I+ L K G+  +A +
Sbjct: 220 LPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASR 279

Query: 389 LWKQMM---EKGC-KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +++ M    E G  KPNTV Y+ +++G C  G  +EA  I F+ + N    +  +Y+  M
Sbjct: 280 IFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI-FDSMKNSETLSLRSYNIWM 338

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G   SGK  +A  I  +MA+ N   N   Y++L+HGLC+ G   +AR +   M   G  
Sbjct: 339 LGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVA 398

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD V YS+++HG C  G + EA  +  EM  ++    P+++T NILL++L K+   S + 
Sbjct: 399 PDTVTYSTLLHGYCRRGKILEANYVLREM--IQVGCFPNMYTCNILLHSLWKEGRASEAE 456

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTAL 589
           DLL  M +RG   D VTCN  +  L
Sbjct: 457 DLLQMMNERGYGLDNVTCNTMINGL 481



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 157/614 (25%), Positives = 289/614 (47%), Gaps = 55/614 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  LI      G  ++   V  +M  +     E S   + + Y +A L    I L   M
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEM 214

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    V ++N+V++ +  EG   + +E    +   + + + P+ +TFN  I  +C+
Sbjct: 215 RSSGALPNRV-AYNTVISSLCGEG---QTVEAEKLVEKMREVGLSPDIVTFNCRIAALCK 270

Query: 205 LGLVDNAIQLFREMPVRN----CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            G +  A ++FR+M +       +P+  TY  +++G C E   +EA  + D M+      
Sbjct: 271 SGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL- 329

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +  ++N+ + GL ++G+L  A  +++ M  K   PN  +YN L+HGLC  G    A S+L
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL 389

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             M  S   P+ VTY T+++G  + G+ ++   VL  M +     N Y  + L+  L+KE
Sbjct: 390 GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI---------------- 424
           G+A +A  L + M E+G   + V  + +I+GLC+ G  D+A EI                
Sbjct: 450 GRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLG 509

Query: 425 -----LFEMINNG--CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
                LF++ NNG  C  ++ TY++++ G  + G+  +A +   +M       + + +  
Sbjct: 510 NSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDT 569

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
            I+  C+ GKL  A  V  +M  +GC   +  Y+S+I GL +   + E   L +EM   E
Sbjct: 570 FIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEM--KE 627

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE--A 595
               P+V+TYN +++ L +   +  +  LL+ M+ +G  P++ T  I + A  +  +  A
Sbjct: 628 RGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGA 687

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGF---------------KIVEVMLQKFLSPQTSTWER 640
            Q+    L E+A+ L   + +   F               ++ E  L + L+ +   +  
Sbjct: 688 AQE----LFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRD 743

Query: 641 VVQELCRPKRIQAA 654
           ++++LC+  ++  A
Sbjct: 744 LIEKLCKDGKLDDA 757



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 235/530 (44%), Gaps = 95/530 (17%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI-LPNTLT 194
           EA +L   M  E      + +FN  +  + + G    A   +  +   + M +  PNT+T
Sbjct: 241 EAEKLVEKM-REVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVT 299

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEP-DIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           +NL+++  C  G+ + A  +F  M  +N E   + +Y   M GL +  +L EA L+L+EM
Sbjct: 300 YNLMLEGFCSEGMFEEARAIFDSM--KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEM 357

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P   ++N+L++GLCK G    A  ++  M   G  P+ VTY+TL+HG C +G +
Sbjct: 358 AEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKI 417

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  +L  M+   C PN  T   +++ L K GRA +   +L  M ER + ++    +T+
Sbjct: 418 LEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTM 477

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKG-----------------------CKPNTVVYSALID 410
           I+GL K G  + A+++   M  +G                       C P+++ Y+ +I 
Sbjct: 478 INGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIG 537

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC+VG+ DEA++ L EMI    + ++  + + +  + + GK   A  + K+M K  C  
Sbjct: 538 GLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNK 597

Query: 471 NEVCYSVLIHGL-----------------------------------CEDGKLREARMVW 495
           +   Y+ LI GL                                    E GKL++A  + 
Sbjct: 598 SLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLL 657

Query: 496 TQMLSRGCKPDVVAYSSMIHGL---CNAGSVEEALK---------------LFNEMLC-- 535
            +ML +G  P++  +  +I      C+ G+ +E  +               +FNE+L   
Sbjct: 658 DEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGG 717

Query: 536 ------------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
                       L+       F Y  L+  LCK   +  +  +L+ MMD+
Sbjct: 718 ETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDK 767



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 136/546 (24%), Positives = 229/546 (41%), Gaps = 101/546 (18%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK----SFIFIFKAYGKAHLVEEAIRL 140
           TF   I     SG       +   M+ ++ + L K    ++  + + +    + EEA  +
Sbjct: 260 TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI 319

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F +M +      +++S+N  +  +++ G   + LE +  +      NI PN  ++N+++ 
Sbjct: 320 FDSMKNSETL--SLRSYNIWMLGLVRSG---KLLEAHLILNEMAEKNIKPNLYSYNILVH 374

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+ G+  +A  +   M      PD  TY TL+ G C+  ++ EA  +L EM   GCFP
Sbjct: 375 GLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFP 434

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T N+L++ L K G    A  L+  M  +G   + VT NT+I+GLC  GNLDKA+ ++
Sbjct: 435 NMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIV 494

Query: 321 DRMV-----------------------ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
             M                          KC+P+ +TY TII GL K+GR  +  + L+ 
Sbjct: 495 SGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLE 554

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK------------------ 399
           M  +K   +  I+ T I    K+GK   A ++ K+M +KGC                   
Sbjct: 555 MIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQ 614

Query: 400 -----------------PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
                            PN   Y+ +I  L   GK  +A  +L EM+  G + N +T+  
Sbjct: 615 IFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRI 674

Query: 443 LMKGFFES----------------------------------GKGHKAVEIWKDMAKNNC 468
           L+  FF++                                  G+  KA E+++     + 
Sbjct: 675 LIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSL 734

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
                 Y  LI  LC+DGKL +A  +  +M+ +    D  ++  +I  L   GS   A +
Sbjct: 735 ALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADE 794

Query: 529 LFNEML 534
               M+
Sbjct: 795 FAERMM 800



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 201/514 (39%), Gaps = 97/514 (18%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +++ + + G F+    +   M+  + + L    I++        L+E  + L    
Sbjct: 299 TYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLIL--NE 356

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E + K  + S+N +++ + + G++  A      +   +   + P+T+T++ ++   CR
Sbjct: 357 MAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM---RESGVAPDTVTYSTLLHGYCR 413

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A  + REM    C P++YT   L+  L KE R  EA  LL  M   G     VT
Sbjct: 414 RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKG-----------------------CLPNEVTYN 301
            N +INGLCK G L +A ++V  M+ +G                       CLP+ +TY 
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYA 533

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME-- 359
           T+I GLC  G +D+A   L  M+  K  P+ + + T I    K G+     RVL  ME  
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK 593

Query: 360 ---------------------------------ERKFHVNEYIYSTLISGLFKEGKAEDA 386
                                            ER    N Y Y+ +IS L + GK +DA
Sbjct: 594 GCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDA 653

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGL---CRVGKPDEAEEI------------------- 424
             L  +M++KG  PN   +  LI      C  G   E  EI                   
Sbjct: 654 TCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNEL 713

Query: 425 -----------LFEM-INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
                      LFE  ++   A   F Y  L++   + GK   A  I   M      ++ 
Sbjct: 714 LAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDP 773

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             +  +I  L + G    A     +M+    + D
Sbjct: 774 ASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807


>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 234/434 (53%), Gaps = 14/434 (3%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R+  + N V++++ ++  +     ++  +   K+ NI     TF+++I    + G+ + A
Sbjct: 94  RSWVTHNLVIDMLAKDDGFD---TYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKA 150

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           ++ F +M    C+PD++TY +++  + ++     A+ + ++M      P   TF +L+NG
Sbjct: 151 VESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNG 210

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCKNG+   A K+ D M  KG  PN + Y  ++ GLC     D    LL+ M  S C P+
Sbjct: 211 LCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPD 270

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            +T   +++G  KLG+  +   +L   E+  + +    YS+LI GLF+  + ++  +  +
Sbjct: 271 SITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCR 330

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M + G +P+ V+Y+ LI G C VG  D A  +L +M   G + + + Y++L+KGF + G
Sbjct: 331 KMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVG 390

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              KA  +  +++KN+C      Y++LI G+C +G L EAR ++ QM + GC P ++ ++
Sbjct: 391 LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFN 450

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF-TYNILLNALCKQSNISHSID----- 565
           ++I GLC AG +EEA  LF +M   E    P +F   +   + +   +N  H +D     
Sbjct: 451 ALIDGLCKAGELEEARHLFYKM---EIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDA 507

Query: 566 --LLNSMMDRGCDP 577
             +L+ M+  GC P
Sbjct: 508 FRVLDQMVKNGCTP 521



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 185/720 (25%), Positives = 311/720 (43%), Gaps = 126/720 (17%)

Query: 27  LTTIPSERSHR------FFSVRSAVSSNKQ---MET-EPQGNAKSE-QPF-SDEIFNST- 73
           L  IP +   R      F + + A  SN+    MET  P  +A  +  PF S EI N   
Sbjct: 12  LHFIPKQSRFRCLHANLFTTAQGAAISNEVLTVMETVNPMEDALEKLAPFLSSEIVNDVM 71

Query: 74  -----PKLG----SYQLGDSTFYSLIQH------YANSGDFKSLEMVLYRMRREKRVVLE 118
                P+LG     +     +F S + H       A    F +   +L  ++     +  
Sbjct: 72  REQRRPELGFRFFIWTTRRRSFRSWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPP 131

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
            +F  +  AY K+ + E+A+  F  M D F CK  V ++NS+L+V++Q+ ++  AL  YN
Sbjct: 132 PTFSVLIAAYAKSGMAEKAVESFGKMKD-FGCKPDVFTYNSILHVMVQKEVFLLALAVYN 190

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++    +N  PN  TF +++  +C+ G  D+A+++F EM  +   P+   Y  ++ GLC
Sbjct: 191 QMLK---LNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLC 247

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA----------------- 281
           +  R D+   LL+ M+V GC P  +T N L++G CK G++  A                 
Sbjct: 248 QAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIK 307

Query: 282 --AKLVDN----------------MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
             + L+D                 MF  G  P+ V Y  LI G C  G +D A+++L+ M
Sbjct: 308 GYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDM 367

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVL-MSMEERKFHVNEYIYSTLISGLFKEGK 382
                 P+   Y  +I G   +G  +D AR L + + +         Y+ LI G+ + G 
Sbjct: 368 TQRGLSPDTYCYNALIKGFCDVG-LLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGL 426

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-------INNGCAA 435
            ++A +++ QM   GC P+ + ++ALIDGLC+ G+ +EA  + ++M       +    + 
Sbjct: 427 LDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQ 486

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
            A        GF    +   A  +   M KN C  +   Y  L+   C  GKL  A  +W
Sbjct: 487 GADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLW 546

Query: 496 TQML-SRGCKPD---------------------------------VVAYSSMIHGLCNAG 521
            + L S   + D                                 +  Y+  + GLC A 
Sbjct: 547 LKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQAR 606

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
             EEALK+F  ++  E +   +  +  +L+N LCK  N+  ++D+    +++G       
Sbjct: 607 RSEEALKIF--LVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRI 664

Query: 582 CNIFLTA--LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
           CN  L +  L++K+   +   D LN +          S G+ + E +  +  S   S W+
Sbjct: 665 CNQLLRSLILQDKM---KHALDLLNRM---------NSAGYDLDEYLHHRIKSYLLSVWK 712



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 219/453 (48%), Gaps = 31/453 (6%)

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           T+  ++D L K++  D    +L+E++       P TF+VLI    K+G   +A +    M
Sbjct: 98  THNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKM 157

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              GC P+  TYN+++H +  K     A+++ ++M+     PN  T+  ++NGL K G+ 
Sbjct: 158 KDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKT 217

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            D  ++   M ++    N  IY+ ++SGL +  + +D  +L   M   GC P+++  +AL
Sbjct: 218 DDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNAL 277

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           +DG C++G+ DEA  +L      G       YSSL+ G F + +  +  E  + M K   
Sbjct: 278 LDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGI 337

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             + V Y++LI G CE G +  A  +   M  RG  PD   Y+++I G C+ G +++A  
Sbjct: 338 EPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARS 397

Query: 529 LFNEMLCLEPKSQPDVF----TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           L  E+      S+ D F    TY IL+  +C+   +  +  + N M + GC P ++T N 
Sbjct: 398 LQLEI------SKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNA 451

Query: 585 FLTALKE------------KLEAPQD---------GTDFLNELAIRLFKRQRTSGGFKIV 623
            +  L +            K+E  ++         G D + + A    +  R    F+++
Sbjct: 452 LIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVL 511

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           + M++   +P ++ ++ ++   CR  ++  A +
Sbjct: 512 DQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFS 544



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 21/292 (7%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKR----VVLEKSFIF 123
           +IFN    LG       TF +LI     +G+ +    + Y+M   K     + L +    
Sbjct: 432 QIFNQMENLGCSP-SIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADR 490

Query: 124 IFKAYGKAHLV---EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +       H V   E+A R+   MV    C  +   +  ++    ++G    A   +   
Sbjct: 491 VMDTANGFHRVDREEDAFRVLDQMVKN-GCTPSSAVYKCLMTWSCRKGKLSVAFSLW--- 546

Query: 181 VNAKHMNILPNTLTFNL-VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
              K++  LP+     L + +     G ++ A++   EM  +    +I  Y   + GLC+
Sbjct: 547 --LKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQ 604

Query: 240 ENRLDEAV---LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
             R +EA+   L+L E Q+D   P+ V   +LINGLCK+G L  A  +      KG +  
Sbjct: 605 ARRSEEALKIFLVLKECQMDVNPPSCV---MLINGLCKDGNLEMAVDIFLYTLEKGFMLM 661

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
               N L+  L L+  +  A+ LL+RM ++    +E  +  I + L+ + +A
Sbjct: 662 PRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIKSYLLSVWKA 713


>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
 gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Cucumis sativus]
          Length = 875

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 147/445 (33%), Positives = 237/445 (53%), Gaps = 12/445 (2%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K +++S  ++  ++I   + H  ++  + ++ ++H +   +   F+LV +T+  LGL++N
Sbjct: 43  KPSLQSVPAIARILITAKM-HPQIDHLHQLLLSQHRD-FAHPSGFSLV-RTLADLGLLEN 99

Query: 211 AIQLFREMPVR--NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           AI  FR +  R  +  P I  Y  L     KE+R+D  + L  +M V    P   TFN+L
Sbjct: 100 AISQFRSLRDRFPHDPPPISFYNLLFRCSLKESRVDCVIWLYKDMAVARVKPQTYTFNLL 159

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+ LC+ G L  A ++ D M  KGC PNE +   L+ G C  G     + LLD M +S  
Sbjct: 160 ISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGA 219

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
           +PN V Y T+I+ L   G+ V+  +++  M E     +   ++  I+ L K G+  +A +
Sbjct: 220 LPNRVAYNTVISSLCGEGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASR 279

Query: 389 LWKQMM---EKGC-KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +++ M    E G  KPNTV Y+ +++G C  G  +EA  I F+ + N    +  +Y+  M
Sbjct: 280 IFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI-FDSMKNSETLSLRSYNIWM 338

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G   SGK  +A  I  +MA+ N   N   Y++L+HGLC+ G   +AR +   M   G  
Sbjct: 339 LGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVA 398

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD V YS+++HG C  G + EA  +  EM  ++    P+++T NILL++L K+   S + 
Sbjct: 399 PDTVTYSTLLHGYCRRGKILEANYVLREM--IQVGCFPNMYTCNILLHSLWKEGRASEAE 456

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTAL 589
           DLL  M +RG   D VTCN  +  L
Sbjct: 457 DLLQMMNERGYGLDNVTCNTMINGL 481



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 157/614 (25%), Positives = 289/614 (47%), Gaps = 55/614 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  LI      G  ++   V  +M  +     E S   + + Y +A L    I L   M
Sbjct: 155 TFNLLISALCEMGYLENAREVFDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEM 214

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    V ++N+V++ +  EG   + +E    +   + + + P+ +TFN  I  +C+
Sbjct: 215 RSSGALPNRV-AYNTVISSLCGEG---QTVEAEKLVEKMREVGLSPDIVTFNCRIAALCK 270

Query: 205 LGLVDNAIQLFREMPVRN----CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            G +  A ++FR+M +       +P+  TY  +++G C E   +EA  + D M+      
Sbjct: 271 SGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSMKNSETL- 329

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +  ++N+ + GL ++G+L  A  +++ M  K   PN  +YN L+HGLC  G    A S+L
Sbjct: 330 SLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDARSIL 389

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             M  S   P+ VTY T+++G  + G+ ++   VL  M +     N Y  + L+  L+KE
Sbjct: 390 GLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKE 449

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI---------------- 424
           G+A +A  L + M E+G   + V  + +I+GLC+ G  D+A EI                
Sbjct: 450 GRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLG 509

Query: 425 -----LFEMINNG--CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
                LF++ NNG  C  ++ TY++++ G  + G+  +A +   +M       + + +  
Sbjct: 510 NSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDT 569

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
            I+  C+ GKL  A  V  +M  +GC   +  Y+S+I GL +   + E   L +EM   E
Sbjct: 570 FIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEM--KE 627

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE--A 595
               P+V+TYN +++ L +   +  +  LL+ M+ +G  P++ T  I + A  +  +  A
Sbjct: 628 RGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGA 687

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGF---------------KIVEVMLQKFLSPQTSTWER 640
            Q+    L E+A+ L   + +   F               ++ E  L + L+ +   +  
Sbjct: 688 AQE----LFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSLALKNFLYRD 743

Query: 641 VVQELCRPKRIQAA 654
           ++++LC+  ++  A
Sbjct: 744 LIEKLCKDGKLDDA 757



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 136/530 (25%), Positives = 235/530 (44%), Gaps = 95/530 (17%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI-LPNTLT 194
           EA +L   M  E      + +FN  +  + + G    A   +  +   + M +  PNT+T
Sbjct: 241 EAEKLVEKM-REVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVT 299

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEP-DIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           +NL+++  C  G+ + A  +F  M  +N E   + +Y   M GL +  +L EA L+L+EM
Sbjct: 300 YNLMLEGFCSEGMFEEARAIFDSM--KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEM 357

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P   ++N+L++GLCK G    A  ++  M   G  P+ VTY+TL+HG C +G +
Sbjct: 358 AEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKI 417

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  +L  M+   C PN  T   +++ L K GRA +   +L  M ER + ++    +T+
Sbjct: 418 LEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTM 477

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKG-----------------------CKPNTVVYSALID 410
           I+GL K G  + A+++   M  +G                       C P+++ Y+ +I 
Sbjct: 478 INGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIG 537

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC+VG+ DEA++ L EMI    + ++  + + +  + + GK   A  + K+M K  C  
Sbjct: 538 GLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNK 597

Query: 471 NEVCYSVLIHGL-----------------------------------CEDGKLREARMVW 495
           +   Y+ LI GL                                    E GKL++A  + 
Sbjct: 598 SLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLL 657

Query: 496 TQMLSRGCKPDVVAYSSMIHGL---CNAGSVEEALK---------------LFNEMLC-- 535
            +ML +G  P++  +  +I      C+ G+ +E  +               +FNE+L   
Sbjct: 658 DEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGG 717

Query: 536 ------------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
                       L+       F Y  L+  LCK   +  +  +L+ MMD+
Sbjct: 718 ETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDK 767



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 136/546 (24%), Positives = 229/546 (41%), Gaps = 101/546 (18%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK----SFIFIFKAYGKAHLVEEAIRL 140
           TF   I     SG       +   M+ ++ + L K    ++  + + +    + EEA  +
Sbjct: 260 TFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAI 319

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F +M +      +++S+N  +  +++ G   + LE +  +      NI PN  ++N+++ 
Sbjct: 320 FDSMKNSETL--SLRSYNIWMLGLVRSG---KLLEAHLILNEMAEKNIKPNLYSYNILVH 374

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+ G+  +A  +   M      PD  TY TL+ G C+  ++ EA  +L EM   GCFP
Sbjct: 375 GLCKYGMFSDARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFP 434

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T N+L++ L K G    A  L+  M  +G   + VT NT+I+GLC  GNLDKA+ ++
Sbjct: 435 NMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIV 494

Query: 321 DRMV-----------------------ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
             M                          KC+P+ +TY TII GL K+GR  +  + L+ 
Sbjct: 495 SGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLE 554

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK------------------ 399
           M  +K   +  I+ T I    K+GK   A ++ K+M +KGC                   
Sbjct: 555 MIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSENQ 614

Query: 400 -----------------PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
                            PN   Y+ +I  L   GK  +A  +L EM+  G + N +T+  
Sbjct: 615 IFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKGISPNIYTFRI 674

Query: 443 LMKGFFES----------------------------------GKGHKAVEIWKDMAKNNC 468
           L+  FF++                                  G+  KA E+++     + 
Sbjct: 675 LIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNELLAGGETLKAKELFEAALDRSL 734

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
                 Y  LI  LC+DGKL +A  +  +M+ +    D  ++  +I  L   GS   A +
Sbjct: 735 ALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDPASFMPVIDELGKRGSKHAADE 794

Query: 529 LFNEML 534
               M+
Sbjct: 795 FAERMM 800



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 201/514 (39%), Gaps = 97/514 (18%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +++ + + G F+    +   M+  + + L    I++        L+E  + L    
Sbjct: 299 TYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGLVRSGKLLEAHLIL--NE 356

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E + K  + S+N +++ + + G++  A      +   +   + P+T+T++ ++   CR
Sbjct: 357 MAEKNIKPNLYSYNILVHGLCKYGMFSDARSILGLM---RESGVAPDTVTYSTLLHGYCR 413

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A  + REM    C P++YT   L+  L KE R  EA  LL  M   G     VT
Sbjct: 414 RGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMNERGYGLDNVT 473

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKG-----------------------CLPNEVTYN 301
            N +INGLCK G L +A ++V  M+ +G                       CLP+ +TY 
Sbjct: 474 CNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGKKCLPDSITYA 533

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME-- 359
           T+I GLC  G +D+A   L  M+  K  P+ + + T I    K G+     RVL  ME  
Sbjct: 534 TIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKK 593

Query: 360 ---------------------------------ERKFHVNEYIYSTLISGLFKEGKAEDA 386
                                            ER    N Y Y+ +IS L + GK +DA
Sbjct: 594 GCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDA 653

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGL---CRVGKPDEAEEI------------------- 424
             L  +M++KG  PN   +  LI      C  G   E  EI                   
Sbjct: 654 TCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFEIALSLCGHKESLYSFMFNEL 713

Query: 425 -----------LFEM-INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
                      LFE  ++   A   F Y  L++   + GK   A  I   M      ++ 
Sbjct: 714 LAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYSFDP 773

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             +  +I  L + G    A     +M+    + D
Sbjct: 774 ASFMPVIDELGKRGSKHAADEFAERMMEMASETD 807


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 149/499 (29%), Positives = 258/499 (51%), Gaps = 14/499 (2%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
           QGN  S    +  +FN   + G +     T+  LI+   NSG+ +    +  +M+     
Sbjct: 338 QGNLDS----ALNLFNKITEDGLFP-NKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIP 392

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK-RTVKSFNSVLNVIIQEGLYHRAL 174
               +   + + Y KA L EEA +LF   VD   C    + ++N +++ + + G    A 
Sbjct: 393 PSVFNVNSLLRGYLKAPLWEEASKLFDEAVD---CGVANIFTYNIMMSWLCKGGKMDEAC 449

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
              +++VN     ++PN +++N +I   CR G +D A  +F +M  R+ +P++ TY  L+
Sbjct: 450 SLLDNMVN---QGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILI 506

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           DG  K+   ++A+ L D+M      PT  TFN +INGLCK G++  A   + N   +G +
Sbjct: 507 DGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFI 566

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+ +TYN+++ G   +GN+D A+++   M      PN VTY ++ING  K  R     + 
Sbjct: 567 PSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKT 626

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M E+   ++   YS LI G  K    E A  L+ +++E G  PN +VY+++I G   
Sbjct: 627 RDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRD 686

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +   + A     +MIN+    +  TY++L+ G  + G+   A +++ +M     V + + 
Sbjct: 687 LNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIIT 746

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           + VL++GLC  G+L  AR +  +M  +   P V+ Y+++I G    G+++EA  L +EM 
Sbjct: 747 FHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEM- 805

Query: 535 CLEPKSQPDVFTYNILLNA 553
            L+    PD  TY+IL+N 
Sbjct: 806 -LDRGLVPDDVTYDILING 823



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 161/606 (26%), Positives = 289/606 (47%), Gaps = 33/606 (5%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           ++E F  T + G  +L    +  +IQ      +      +L  M+    V  E +F  + 
Sbjct: 239 AEEYFRETKERG-VKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVI 297

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSF--NSVLNVIIQEGLYHRALEFYNHIVNA 183
            A      + EA+RL   M++   C + +      S++     +G    AL  +N I   
Sbjct: 298 VACVAQGNMVEALRLKEEMIN---CGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITED 354

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               + PN +T++++I+  C  G ++ A +L+ +M +    P ++   +L+ G  K    
Sbjct: 355 ---GLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 411

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA  L DE  VD       T+N++++ LCK G++  A  L+DNM  +G +PN V+YN +
Sbjct: 412 EEASKLFDE-AVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDM 470

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C KGN+D A S+   M+A    PN VTY  +I+G  K G +     +   M     
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 530

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
              ++ ++T+I+GL K G+  +A    K  +E+G  P+ + Y++++DG  + G  D A  
Sbjct: 531 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 590

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EM   G + N  TY+SL+ GF +S +   A++   +M +     +   YS LI G C
Sbjct: 591 VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFC 650

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           +   +  A+ ++ ++L  G  P+ + Y+SMI G  +  ++E AL  + +M+    +   D
Sbjct: 651 KRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI--NDRIPCD 708

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTD 601
           + TY  L++ L K+  +  + DL   M+ +G  PD++T ++ +  L  K +LE  +   +
Sbjct: 709 LGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILE 768

Query: 602 ------------FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV------- 642
                         N L    F+       F + + ML + L P   T++ ++       
Sbjct: 769 EMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGD 828

Query: 643 QELCRP 648
           + L RP
Sbjct: 829 RSLSRP 834



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 133/520 (25%), Positives = 238/520 (45%), Gaps = 50/520 (9%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRT---VKSFNSVLNVIIQEGLYHRALE 175
           + F ++  AY +A+ +E AI  F+ M+    C+     V   N +L  +++  +     +
Sbjct: 151 RVFNYLLNAYIRANRIENAIDCFNAMI----CQDVIPWVPYMNILLTALVRRNMIGELRD 206

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
            YN +V      I  +  T +++++   + G V+ A + FRE   R  + D   Y  ++ 
Sbjct: 207 LYNKMV---LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQ 263

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI-------------------------- 269
            +CK+   +  + LL+EM+  G  P+  TF  +I                          
Sbjct: 264 AVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPM 323

Query: 270 ---------NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
                     G C  G L  A  L + +   G  PN+VTY+ LI G C  GN++KA  L 
Sbjct: 324 NLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELY 383

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            +M  +   P+     +++ G +K     + +++     +     N + Y+ ++S L K 
Sbjct: 384 TQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKG 442

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK ++A  L   M+ +G  PN V Y+ +I G CR G  D A  +  +M+      N  TY
Sbjct: 443 GKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTY 502

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           S L+ G F+ G   KA++++  M   N    +  ++ +I+GLC+ G++ EAR      L 
Sbjct: 503 SILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLE 562

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G  P  + Y+S++ G    G+++ AL ++ EM   E    P+V TY  L+N  CK + I
Sbjct: 563 EGFIPSCMTYNSIVDGFIKEGNIDSALAVYREM--CEFGVSPNVVTYTSLINGFCKSNRI 620

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQD 598
             ++   + M ++G + D+   +  +     +  +E+ QD
Sbjct: 621 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQD 660



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 236/495 (47%), Gaps = 18/495 (3%)

Query: 176 FYNHIVN-AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           F +H++N AK  +   +   FN ++    R   ++NAI  F  M  ++  P +     L+
Sbjct: 133 FVDHLINCAKRFDFELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILL 192

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             L + N + E   L ++M + G +    T +V++    K G +  A +       +G  
Sbjct: 193 TALVRRNMIGELRDLYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVK 252

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
            +   Y+ +I  +C K N +  + LL+ M     +P+E T+ ++I   V  G  V+  R+
Sbjct: 253 LDAGAYSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRL 312

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M      +N  + ++L+ G   +G  + A+ L+ ++ E G  PN V YS LI+G C 
Sbjct: 313 KEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCN 372

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G  ++A E+  +M  NG   + F  +SL++G+ ++    +A +++ D A +  V N   
Sbjct: 373 SGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLF-DEAVDCGVANIFT 431

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y++++  LC+ GK+ EA  +   M+++G  P+VV+Y+ MI G C  G+++ A  +F++ML
Sbjct: 432 YNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML 491

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KE 591
             + K  P+V TY+IL++   K+ +   ++DL + M+     P   T N  +  L    +
Sbjct: 492 ARDLK--PNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQ 549

Query: 592 KLEAPQDGTDFL-----------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
             EA     +FL           N +     K         +   M +  +SP   T+  
Sbjct: 550 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 609

Query: 641 VVQELCRPKRIQAAI 655
           ++   C+  RI  A+
Sbjct: 610 LINGFCKSNRIDLAL 624



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 187/409 (45%), Gaps = 19/409 (4%)

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            FN L+N   +   +  A    + M  +  +P     N L+  L  +  + +   L ++M
Sbjct: 152 VFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 211

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V      +  T   ++   +K GR  +        +ER   ++   YS +I  + K+  +
Sbjct: 212 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
              ++L ++M E+G  P+   ++++I      G   EA  +  EMIN G   N    +SL
Sbjct: 272 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 331

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           MKG+   G    A+ ++  + ++    N+V YSVLI G C  G + +A  ++TQM   G 
Sbjct: 332 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 391

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEML-CLEPKSQPDVFTYNILLNALCKQSNISH 562
            P V   +S++ G   A   EEA KLF+E + C       ++FTYNI+++ LCK   +  
Sbjct: 392 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDC----GVANIFTYNIMMSWLCKGGKMDE 447

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL------------ 610
           +  LL++M+++G  P++V+ N  +     K       + F + LA  L            
Sbjct: 448 ACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILID 507

Query: 611 --FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
             FK+  +     + + ML   ++P   T+  ++  LC+  ++  A +K
Sbjct: 508 GNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDK 556


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 219/436 (50%), Gaps = 7/436 (1%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R ++++ +++N     G    +    + ++ A      P++  +   +   CR GL+ +A
Sbjct: 70  RNLRTYTTLINAYCLAGDLPASKRHLSSLLRA---GFAPDSHAYTSFVVGYCRAGLLAHA 126

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
            +LF  MP+R C    +TY  L+ GLC    + EA+ +   MQ DGC P P  +  +++G
Sbjct: 127 CRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHG 186

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LC  G    A  L+ +   +G  PN V YN LI G C  G+L+ AV + +RM  + C PN
Sbjct: 187 LCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPN 246

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
             TY  +I+G  K  R +D A +L S M +     N   Y+ LI G   +G+ + A +L 
Sbjct: 247 VRTYTELISGFCK-SRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLL 305

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           + M   G  PN    S LID LC+  +  EA+ +L  +I  G   N   Y+SL+ G  ++
Sbjct: 306 QSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKA 365

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G+   A  + + +     V +   YS LI GLC   +L EA +V   M+ +G +P  V Y
Sbjct: 366 GRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTY 425

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + +I  L      + + K+ ++M+    K  PDVFTY I + + C +  +  +  ++  M
Sbjct: 426 TIIIDELVREVGADGSKKILDKMIAAGIK--PDVFTYTIFVRSYCHEGRMEDAEHMMLHM 483

Query: 571 MDRGCDPDLVTCNIFL 586
           +D G  P+LVT N  +
Sbjct: 484 VDHGVCPNLVTYNALI 499



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/570 (26%), Positives = 257/570 (45%), Gaps = 46/570 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y  +GD  + +  L  + R        ++      Y +A L+  A RLF  +
Sbjct: 74  TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF-VL 132

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C RT                                        T+  ++  +C 
Sbjct: 133 MPLRGCVRT--------------------------------------AFTYTALLHGLCG 154

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G+V  A+ +F  M    C PD + Y T++ GLC   R  EA  LL +   +G  P  V 
Sbjct: 155 AGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVV 214

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+G C  G+L  A  + + M + GC PN  TY  LI G C    LD+A+ L  RMV
Sbjct: 215 YNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +  +PN VTY  +I G    G+     R+L SME      NE+  S LI  L K  +  
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A  L   +++KG K N +VY++LIDGLC+ G+   A+ ++  +++ G   +A TYSSL+
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G     +  +A+ +  DM +     + V Y+++I  L  +     ++ +  +M++ G K
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PDV  Y+  +   C+ G +E+A  +   M  ++    P++ TYN L+         S + 
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHM--VDHGVCPNLVTYNALICGYANLGLTSQAF 512

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
                M+  GC P+  +  + L  L +K     + ++ +   ++ ++K         ++E
Sbjct: 513 STFKHMVANGCKPNEESYTVLLRLLIKK-----ESSNNIPANSVSIWKIAEMKYLHGLLE 567

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            M++  L  +   +   +  LCR  R+  A
Sbjct: 568 EMVKLQLPSEIDIYNCFLTSLCRVDRLDEA 597



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 210/440 (47%), Gaps = 33/440 (7%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           MP RN    + TY TL++  C    L  +   L  +   G  P    +   + G C+ G 
Sbjct: 67  MPARN----LRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGL 122

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           L  A +L   M L+GC+    TY  L+HGLC  G + +A+S+   M A  C P+   Y T
Sbjct: 123 LAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYAT 182

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +++GL   GR  +   +L       F  N  +Y+ LI G    G  E A+ ++++M   G
Sbjct: 183 MVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG 242

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
           C PN   Y+ LI G C+  K D A  +   M++ G   N  TY++L++G    G+   A 
Sbjct: 243 CSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAY 302

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            + + M  +  V NE   SVLI  LC+  ++ EA+++   ++ +G K + + Y+S+I GL
Sbjct: 303 RLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGL 362

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           C AG    A +L   ++     SQ   PD  TY+ L++ LC+Q  +S ++ +L+ MM++G
Sbjct: 363 CKAGRFAAADRLMQTLV-----SQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG 417

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             P  VT  I +  L  ++ A                      G  KI++ M+   + P 
Sbjct: 418 VQPSPVTYTIIIDELVREVGA---------------------DGSKKILDKMIAAGIKPD 456

Query: 635 TSTWERVVQELCRPKRIQAA 654
             T+   V+  C   R++ A
Sbjct: 457 VFTYTIFVRSYCHEGRMEDA 476



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 131/497 (26%), Positives = 234/497 (47%), Gaps = 25/497 (5%)

Query: 112 EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
           E  VV+  + I     Y     +E A+ +F  M D   C   V+++  +++   +     
Sbjct: 209 EPNVVVYNALI---DGYCNVGDLELAVDVFERM-DVNGCSPNVRTYTELISGFCKSRKLD 264

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
           RA+  ++ +V+A    ++PN +T+  +I+  C  G +D A +L + M      P+ +T  
Sbjct: 265 RAMMLFSRMVDA---GLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCS 321

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L+D LCK  R+ EA LLL  +   G     + +  LI+GLCK G    A +L+  +  +
Sbjct: 322 VLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQ 381

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G +P+  TY++LI GLC +  L +A+ +LD M+     P+ VTY  II+ LV+   A   
Sbjct: 382 GFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGS 441

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            ++L  M       + + Y+  +     EG+ EDA  +   M++ G  PN V Y+ALI G
Sbjct: 442 KKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICG 501

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH----KAVEIWK------ 461
              +G   +A      M+ NGC  N  +Y+ L++   +    +     +V IWK      
Sbjct: 502 YANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKY 561

Query: 462 ------DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
                 +M K         Y+  +  LC   +L EA+++  +M S    P    Y+S+I 
Sbjct: 562 LHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIA 621

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
             C    + EAL   + M  ++    P + +Y  ++++LC++ +I  +  +   M+ +  
Sbjct: 622 CCCRLKMLTEALTFVDSM--VKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEY 679

Query: 576 DPDLVTCNIFLTALKEK 592
           + + +   I +  L +K
Sbjct: 680 NYEEIAWRILIDGLLQK 696



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 116/524 (22%), Positives = 212/524 (40%), Gaps = 84/524 (16%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + +LI  Y N GD +    V  RM         +++  +   + K+  ++ A+ LF  M
Sbjct: 214 VYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRM 273

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA-----------------KH-- 185
           VD       V ++ +++     +G    A      + N+                 KH  
Sbjct: 274 VDAGLVPNVV-TYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHER 332

Query: 186 -------------MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
                          I  N + +  +I  +C+ G    A +L + +  +   PD +TY +
Sbjct: 333 VGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSS 392

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+DGLC++  L EA+L+LD+M   G  P+PVT+ ++I+ L +      + K++D M   G
Sbjct: 393 LIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAG 452

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+  TY   +   C +G ++ A  ++  MV     PN VTY  +I G   LG      
Sbjct: 453 IKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAF 512

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKA----EDAMKLWK--------QMMEKGCK- 399
                M       NE  Y+ L+  L K+  +     +++ +WK         ++E+  K 
Sbjct: 513 STFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKL 572

Query: 400 --PNTV-VYSALIDGLCRVGKPDEAEEILFEM---------------------------- 428
             P+ + +Y+  +  LCRV + DEA+ +L EM                            
Sbjct: 573 QLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEA 632

Query: 429 -------INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
                  + +G      +Y  ++    E G    A +++ DM      Y E+ + +LI G
Sbjct: 633 LTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDG 692

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
           L + G + E   + + M  +  +P    Y+ +   + +A  ++E
Sbjct: 693 LLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 152/606 (25%), Positives = 285/606 (47%), Gaps = 43/606 (7%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + S+I      G+ +  E ++ ++ +        ++  +   Y +   ++ A  +F+ M 
Sbjct: 231 YNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM- 289

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           DE  C+    ++++++N +   G  + AL+F + +   +H  +LP   TF   I  +C +
Sbjct: 290 DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMT--RH-GVLPTVHTFTAPIVALCDM 346

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDG----------------------------- 236
           G +++A ++F +M  + C+P++YTY +L+ G                             
Sbjct: 347 GRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNAL 406

Query: 237 ---LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
              L +   +D A+++ + M   GC P   ++N LI G C  G+  +A  ++ NM     
Sbjct: 407 MNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP 466

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            P  VTYN +I G C  G+ D A+ +L+ M A+ C P+E +Y  +I+G  K+ +    + 
Sbjct: 467 TPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASG 526

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   M +R    NE  Y+ LISG  K+ K + A ++ ++M   GC+PN   Y+ LI GL 
Sbjct: 527 MFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLT 586

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           +      AEE+   M+    + +  TYS+++ G   +G    A+E++  M K+ C+ N  
Sbjct: 587 KQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLH 646

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            YS LI  L ++G++ EA  +++++  +G  PD V Y  MI     +G V+ A     EM
Sbjct: 647 TYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEM 706

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             +    QP + TY++L+  L  +      + L N+      D  ++  ++ ++ L  KL
Sbjct: 707 --INAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDV-ISVLSSKL 763

Query: 594 EAPQD---GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
            A  D        + L  RL +  R      +   M+ +   P   T++  +  L R  +
Sbjct: 764 -AELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALK 822

Query: 651 IQAAIN 656
           +  A++
Sbjct: 823 VDLAMD 828



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 220/460 (47%), Gaps = 22/460 (4%)

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           N + +F +   R  +  ++TY TL+  L K N     +    ++  +G  P  + +N +I
Sbjct: 179 NYLDMFSQ---RGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVI 235

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           N LCK+G +  A  +++ +F  G  P+  TY ++I G C   +LD A  + +RM    C 
Sbjct: 236 NALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCE 295

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PN  TY T+INGL   GR  +    +  M         + ++  I  L   G+ EDA K+
Sbjct: 296 PNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKI 355

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +  M +KGCKPN   Y++LI G  RV +   A  +   M  +G   N  TY++LM    E
Sbjct: 356 FIDMKKKGCKPNVYTYTSLISGQ-RVSR--MAIGLFHRMSRDGVVPNTVTYNALMNVLME 412

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           + +   A+ ++  M K+ C+ N   Y+ LI G C  G   +A  + T ML     P +V 
Sbjct: 413 NMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVT 472

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ +I G C++G  + A+++   M       QPD ++Y  L++  CK S +  +  + N 
Sbjct: 473 YNIIIKGYCDSGDTDVAIRVLELMKA--NGCQPDEWSYTELISGFCKISKMELASGMFNE 530

Query: 570 MMDRGCDPDLVTCNIFLTAL--KEKLEAP------------QDGTDFLNELAIRLFKRQR 615
           MMDRG  P+ VT    ++     EKL+              +      N L   L K+  
Sbjct: 531 MMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNN 590

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            SG  ++ +VML++ +SP   T+  V+  LC    I  A+
Sbjct: 591 FSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLAL 630



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 222/456 (48%), Gaps = 16/456 (3%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           EIFN   + G  +   +T+ +LI    NSG        +  M R   +    +F     A
Sbjct: 284 EIFNRMDEEGC-EPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVA 342

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN----VIIQEGLYHRALEFYNHIVNA 183
                 +E+A ++F  M  +  CK  V ++ S+++      +  GL+HR           
Sbjct: 343 LCDMGRIEDAWKIFIDMKKK-GCKPNVYTYTSLISGQRVSRMAIGLFHRM---------- 391

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               ++PNT+T+N ++  +     +D+A+ +F  M    C P+  +Y  L+ G C     
Sbjct: 392 SRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDT 451

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           ++A+ +L  M      PT VT+N++I G C +G+   A ++++ M   GC P+E +Y  L
Sbjct: 452 EKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTEL 511

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C    ++ A  + + M+     PNEVTY  +I+G  K  +    AR+L  M+    
Sbjct: 512 ISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGC 571

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   Y+ LI GL K+     A +L K M+E+   P+ V YS +I+GLC  G    A E
Sbjct: 572 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALE 631

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  +M+ +GC  N  TYSSL++   + G+  +A E++ ++ K   + +EV Y  +I    
Sbjct: 632 MFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCV 691

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
             GK+  A     +M++ GC+P +  Y  +I GL N
Sbjct: 692 MSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQN 727



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 205/481 (42%), Gaps = 39/481 (8%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +FN   K G      S++  LI+ Y   GD +    +L  M + +      ++  I K Y
Sbjct: 422 VFNMMGKHGCLP-NTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGY 480

Query: 129 GKAHLVEEAIRLFHTM------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
             +   + AIR+   M       DE+     +  F  +  + +  G+++  ++       
Sbjct: 481 CDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMD------- 533

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
                + PN +T+  +I   C+   +D A ++   M    C P++ TY  L+ GL K+N 
Sbjct: 534 ---RGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNN 590

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
              A  L   M  +   P  VT++ +INGLC NG +  A ++ + M   GCLPN  TY++
Sbjct: 591 FSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSS 650

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI  L  +G +++A  +   +     +P+EVTY  +I   V  G+       L  M    
Sbjct: 651 LIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAG 710

Query: 363 FHVNEYIYSTLISGLFKE---------GKAEDAMKLWKQMMEKGC-------------KP 400
                  Y  LI GL  E           A        Q++ K               + 
Sbjct: 711 CQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFEL 770

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           +  +Y AL+  L R G+  EA  +   M++     N  TY   +     + K   A++++
Sbjct: 771 SRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVF 830

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           K M+   C  +   Y  LI  LC+  + +EAR V+ +MLSR    D + ++ +I+GL  A
Sbjct: 831 KHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGA 890

Query: 521 G 521
           G
Sbjct: 891 G 891



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/287 (19%), Positives = 122/287 (42%), Gaps = 21/287 (7%)

Query: 64  PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF 123
           P + E+FN   K G       T+ SLIQ     G  +  E +   ++++  +  E +++ 
Sbjct: 627 PLALEMFNKMVKHGCLP-NLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVK 685

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE-------- 175
           + +    +  V+ A      M++   C+ T+++++ ++  +  E +YH+ +         
Sbjct: 686 MIEVCVMSGKVDRAFDFLGEMINA-GCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTS 744

Query: 176 -FYNHIVNAKHMNILPNTLT----------FNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
            F + I+N   +++L + L           ++ ++  + R G    A  L+R M  ++  
Sbjct: 745 TFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQC 804

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P+  TY   +  L +  ++D A+ +   M    C      +  LI  LC+      A  +
Sbjct: 805 PNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFV 864

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            + M  +    +E+ +  LI+GL   G  D  +  L  M  ++  P+
Sbjct: 865 FEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRNPS 911


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 130/402 (32%), Positives = 216/402 (53%), Gaps = 2/402 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+ +V+  +C+ G  D A  L  +M     EP +  Y T++DGLCK   +D+A+ L
Sbjct: 14  PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM+  G  P  VT++ LI+ LC  G    A++L+ +M  +   P+  T++ LI     
Sbjct: 74  FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G L +A  L D MV     P+ VTY ++ING     R  +  ++   M  +    +   
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI G  K  + E+ M+++++M ++G   NTV Y+ LI GL + G  D A+EI  EM+
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           ++G   N  TY++L+ G  ++GK  KA+ +++ + ++        Y+++I G+C+ GK+ 
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +   ++  +  +G KPDVVAY++MI G C  GS EEA  LF EM   E  + P+   YN 
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM--KEDGTLPNSGCYNT 371

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           L+ A  +  +   S +L+  M   G   D  T  +    L +
Sbjct: 372 LIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 413



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 211/407 (51%), Gaps = 11/407 (2%)

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           + L   M  + C+PD+ TY  +++GLCK    D A  LL++M+     P  + +N +I+G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LCK   +  A  L   M  KG  PN VTY++LI  LC  G    A  LL  M+  K  P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             T+  +I+  VK G+ V+  ++   M +R    +   YS+LI+G     + ++A ++++
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M+ K C P+ V Y+ LI G C+  + +E  E+  EM   G   N  TY+ L++G F++G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
               A EI+K+M  +    N + Y+ L+ GLC++GKL +A +V+  +     +P +  Y+
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            MI G+C AG VE+   LF  +     K  PDV  YN +++  C++ +   +  L   M 
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVK--PDVVAYNTMISGFCRKGSKEEADALFKEMK 358

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           + G  P+      + T ++ +L   +DG     E +  L K  R+ G
Sbjct: 359 EDGTLPN---SGCYNTLIRARL---RDGD---REASAELIKEMRSCG 396



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 198/384 (51%), Gaps = 3/384 (0%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C+  + ++  V+N + + G    A    N +   K   + P  L +N +I  +C+   +D
Sbjct: 12  CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK---LEPGVLIYNTIIDGLCKYKHMD 68

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +A+ LF+EM  +   P++ TY +L+  LC   R  +A  LL +M      P   TF+ LI
Sbjct: 69  DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 128

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           +   K G+L  A KL D M  +   P+ VTY++LI+G C+   LD+A  + + MV+  C 
Sbjct: 129 DAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF 188

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+ VTY T+I G  K  R  +G  V   M +R    N   Y+ LI GLF+ G  + A ++
Sbjct: 189 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 248

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +K+M+  G  PN + Y+ L+DGLC+ GK ++A  +   +  +      +TY+ +++G  +
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 308

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           +GK     +++ +++      + V Y+ +I G C  G   EA  ++ +M   G  P+   
Sbjct: 309 AGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGC 368

Query: 510 YSSMIHGLCNAGSVEEALKLFNEM 533
           Y+++I      G  E + +L  EM
Sbjct: 369 YNTLIRARLRDGDREASAELIKEM 392



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 177/336 (52%), Gaps = 23/336 (6%)

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           ++L+DRMVA  C P+ VTYG ++NGL K G       +L  ME+ K      IY+T+I G
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K    +DA+ L+K+M  KG +PN V YS+LI  LC  G+  +A  +L +MI      +
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            FT+S+L+  F + GK  +A +++ +M K +   + V YS LI+G C   +L EA+ ++ 
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M+S+ C PDVV Y+++I G C    VEE +++F EM   +     +  TYNIL+  L +
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM--SQRGLVGNTVTYNILIQGLFQ 238

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
             +   + ++   M+  G  P+++T N  L           DG          L K  + 
Sbjct: 239 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLL-----------DG----------LCKNGKL 277

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                + E + +  + P   T+  +++ +C+  +++
Sbjct: 278 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 189/388 (48%), Gaps = 24/388 (6%)

Query: 150 CKR--TVKSFNSVLNVIIQEGLYHRALEFYNHIVNA----KHMN-------------ILP 190
           CKR  T  +FN +LN + ++G     +  YN I++     KHM+             I P
Sbjct: 27  CKRGDTDLAFN-LLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRP 84

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N +T++ +I  +C  G   +A +L  +M  R   PD++T+  L+D   KE +L EA  L 
Sbjct: 85  NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 144

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM      P+ VT++ LING C +  L  A ++ + M  K C P+ VTYNTLI G C  
Sbjct: 145 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKY 204

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             +++ + +   M     + N VTY  +I GL + G       +   M       N   Y
Sbjct: 205 KRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 264

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TL+ GL K GK E AM +++ +     +P    Y+ +I+G+C+ GK ++  ++   +  
Sbjct: 265 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 324

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   +   Y++++ GF   G   +A  ++K+M ++  + N  CY+ LI     DG    
Sbjct: 325 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 384

Query: 491 ARMVWTQMLSRGCKPD---VVAYSSMIH 515
           +  +  +M S G   D   +   ++M+H
Sbjct: 385 SAELIKEMRSCGFAGDASTIGLVTNMLH 412


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 169/640 (26%), Positives = 297/640 (46%), Gaps = 69/640 (10%)

Query: 51  METEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMR 110
           +  + QG+A++    + E F    +   Y+     F  ++   + +        V+  M 
Sbjct: 98  LRAQAQGDARA----AFEFFRWADRQWQYRHAPEVFDEMLGLLSRTRLHDPARRVVRLMI 153

Query: 111 REKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY 170
           R       + F  +  +Y +A  +  A+R+   M  +  C   +   N  +NV++  G  
Sbjct: 154 RRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTD-GCAPDISICNVAVNVLVVAGRV 212

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
            +AL F + +   + + + P+ +T+N +IK +C +  V  A+++   M    C PD  +Y
Sbjct: 213 DKALGFADRM---RRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISY 269

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVD-GCFPTPVTFNVLINGL----------------- 272
            T+M  LCKE R+ E   LL  M+ D G     VT+N+LI+ L                 
Sbjct: 270 YTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESE 329

Query: 273 ------------------CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
                             C NG +  A ++V  M  K C P+ VTY+ ++ G C  G +D
Sbjct: 330 GKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEID 389

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A  ++  M  + C PN VT+  ++NGL K+G++ +   +L    E  +  ++  YS ++
Sbjct: 390 QARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVM 449

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G  +EGK +++  +  QM++KG  P TV  + LI  LC+ GKP EA+E + +  + GC 
Sbjct: 450 HGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCT 509

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N   +++++ GF   G    A+ +  D+  +N   + V Y+V+++ L   G+L+EA  +
Sbjct: 510 INVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGL 569

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +ML+RG  P +V Y ++IH  C  G+VEE + L ++ML      Q     YN ++  L
Sbjct: 570 VEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLA----RQELKSVYNQVIEKL 625

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           C    ++ +  LL+ ++      D  TC+I + +             FLN        R 
Sbjct: 626 CAFGKLNEAYGLLSKVLRTASQRDAQTCHILMES-------------FLN--------RG 664

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            T   + +   M Q+ L P     ++V   L   +R QAA
Sbjct: 665 LTIQAYNVACRMFQRNLIPDLKLCQKVDDRLVLEERKQAA 704



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 175/406 (43%), Gaps = 29/406 (7%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
            P  F+ ++  L +      A ++V  M  +G       +  L+      G L  A+ +L
Sbjct: 125 APEVFDEMLGLLSRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVL 184

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             M    C P+       +N LV  GR          M       +   Y+ LI GL   
Sbjct: 185 QLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSV 244

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN-GCAANAFT 439
            +  +A+++   M++ GC P+ + Y  ++  LC+  +  E   +L  M N+ G   +  T
Sbjct: 245 RRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVT 304

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ L+    + G   +A+E  ++        +EV YS ++H  C +G++ EA+ +  +M+
Sbjct: 305 YNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMI 364

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           S+ C PDVV YS+++ G C  G +++A K+   M   +   +P++ T+  LLN LCK   
Sbjct: 365 SKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHM--YKNGCKPNIVTHTALLNGLCKVGK 422

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ-RTSG 618
            S + +LLN   +    P  +T ++ +                        F+R+ +   
Sbjct: 423 SSEAWELLNKSGEDWWTPSDITYSVVMHG----------------------FRREGKLKE 460

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELC---RPKRIQAAINKCWSN 661
              +V  MLQK   P T     ++  LC   +P   +  + +C S 
Sbjct: 461 SCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSK 506



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 115/245 (46%), Gaps = 5/245 (2%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T    N +++ + +EG    A EF      +K   I  N + F  VI    R G +++A+
Sbjct: 476 TTVEINLLIHALCKEGKPAEAKEFMEQ-CQSKGCTI--NVVNFTTVIHGFSRQGDLESAL 532

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L  ++ + N  PD+ TY  +++ L ++ RL EA  L+++M   G  PT VT+  +I+  
Sbjct: 533 SLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRY 592

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C+ G +     L+D M  +  L +   YN +I  LC  G L++A  LL +++ +    + 
Sbjct: 593 CEKGTVEELVDLLDKMLARQELKS--VYNQVIEKLCAFGKLNEAYGLLSKVLRTASQRDA 650

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            T   ++   +  G  +    V   M +R    +  +   +   L  E + + A KL  +
Sbjct: 651 QTCHILMESFLNRGLTIQAYNVACRMFQRNLIPDLKLCQKVDDRLVLEERKQAAGKLIVK 710

Query: 393 MMEKG 397
            +E+G
Sbjct: 711 FVERG 715


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 136/506 (26%), Positives = 255/506 (50%), Gaps = 6/506 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
            T+ ++ +  +  G  + +  VL +MR+   V+   S+  +     ++    EA+ ++  
Sbjct: 158 DTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRR 217

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV E   K ++K++++++  + ++      +     +   + + + PN  TF + I+ + 
Sbjct: 218 MVSE-GLKPSLKTYSALMVALGKKRDSEMVMVLLKEM---EDLGLRPNVYTFTICIRVLG 273

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G +D A ++FR M    C PD+ TY  L+D LC   +L+ A  L  +M+ +G  P  V
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +  L++     G+L    +    M   G +P+ VT+  L+  LC   + D+A +  D M
Sbjct: 334 IYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                +PN  TY T+I GL++ GR  D  ++L +ME        Y Y T I    K G+ 
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGET 453

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A++ +++M  KG  PN V  +A +  L  +G+  EA+ +   +  NG A ++ TY+ +
Sbjct: 454 GKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMM 513

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           MK + + G+  +AV +  +M +N C  + +  + LI  L + G++ EA  ++ +M     
Sbjct: 514 MKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKL 573

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P VV Y++++ GL   G V++A++LF  M  +  K  P+  ++N LL+  CK   +  +
Sbjct: 574 SPTVVTYNTLLSGLGKEGRVQKAIELFESM--IXKKCSPNTISFNTLLDCFCKNDEVELA 631

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + + + M    C PD++T N  +  L
Sbjct: 632 LKMFSKMTVMDCKPDVLTYNTVIYGL 657



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 142/548 (25%), Positives = 265/548 (48%), Gaps = 51/548 (9%)

Query: 83   DSTFYSLIQH-YANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAI 138
            DS  Y+++   Y+  G       +L  M R   E  V++  S I    +  KA  V+EA 
Sbjct: 506  DSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLI---DSLYKAGRVDEAW 562

Query: 139  RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
            ++F  M D      TV ++N++L+ + +EG   +A+E +  ++  K     PNT++FN +
Sbjct: 563  QMFDRMKD-MKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK---CSPNTISFNTL 618

Query: 199  IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
            +   C+   V+ A+++F +M V +C+PD+ TY T++ GL KEN+++ A     +++    
Sbjct: 619  LDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-KSM 677

Query: 259  FPTPVTFNVLINGLCKNGELGRAAKLV-DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  VT   L+ GL K G++G A  +  D M+      N   +  L+ G  ++  +DKA+
Sbjct: 678  HPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAI 737

Query: 318  ---------------SLLDRMVASKCM---------------------PNEVTYGTIING 341
                           S L  +V   C                      P   +Y  +I  
Sbjct: 738  IFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGE 797

Query: 342  LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
            L+++        +   M+      + + ++ L++   K GK  +  +L+K+M+ + CKP+
Sbjct: 798  LLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPD 857

Query: 402  TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
             + Y+ +I  L +    D+A +  ++++++       TY  L+ G  + G+  +A+ +++
Sbjct: 858  AITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFE 917

Query: 462  DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            +M+   C  N   +++LI+G  + G    A  ++ +M++ G +PD+ +Y+ ++  LC AG
Sbjct: 918  EMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAG 977

Query: 522  SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
             V+EAL  FNE+        PD   YN ++N L K   +  ++ L N M +RG  PDL T
Sbjct: 978  RVDEALYYFNELK--STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYT 1035

Query: 582  CNIFLTAL 589
             N  +  L
Sbjct: 1036 YNSLMLNL 1043



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 219/465 (47%), Gaps = 23/465 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  ++N +I  + + G    A++++R M     +P + TY  LM  L K+   +  ++LL
Sbjct: 191 NAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLL 250

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+  G  P   TF + I  L + G++  A ++   M  +GC P+ VTY  LI  LC  
Sbjct: 251 KEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNA 310

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G L+ A  L  +M A+   P++V Y T+++     G           ME   +  +   +
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + L+  L K    ++A   +  M ++G  PN   Y+ LI GL R G+ ++A ++L  M +
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMES 430

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G    A+TY + +  F +SG+  KAVE ++ M     V N V  +  ++ L E G+LRE
Sbjct: 431 VGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A+ ++  +   G  PD V Y+ M+      G V+EA+ L +EM+      +PDV   N L
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMI--RNGCEPDVIVVNSL 548

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +++L K   +  +  + + M D    P +VT N  L+ L                     
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLG-------------------- 588

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            K  R     ++ E M+ K  SP T ++  ++   C+   ++ A+
Sbjct: 589 -KEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELAL 632



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/569 (24%), Positives = 257/569 (45%), Gaps = 85/569 (14%)

Query: 88   SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
            SLI     +G       +  RM+  K      ++  +    GK   V++AI LF +M+ +
Sbjct: 547  SLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXK 606

Query: 148  FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
              C     SFN++L+   +      AL+ ++ +     M+  P+ LT+N VI  + +   
Sbjct: 607  -KCSPNTISFNTLLDCFCKNDEVELALKMFSKMT---VMDCKPDVLTYNTVIYGLIKENK 662

Query: 208  VDNAIQLFREMPVRNCEPDIYTYCT----------------------------------- 232
            V++A   F ++  ++  PD  T CT                                   
Sbjct: 663  VNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWE 721

Query: 233  -LMDGLCKENRLDEAVLLLDEMQVDGC--------------------------------- 258
             LM G   E  +D+A++  +E+ ++G                                  
Sbjct: 722  DLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKK 781

Query: 259  ---FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
                PT  ++N LI  L +     +A  L  +M   GC P+  T+N L+      G + +
Sbjct: 782  LGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITE 841

Query: 316  AVSLLDRMVASKCMPNEVTYGTIINGLVK---LGRAVDGARVLMSMEERKFHVNEYIYST 372
               L   M++ +C P+ +TY  +I+ L K   L +A+D    L+S +   F      Y  
Sbjct: 842  LFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD---FRPTPRTYGP 898

Query: 373  LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
            LI GL K G+ E+AM+L+++M + GCKPN  +++ LI+G  ++G  + A ++   M+N G
Sbjct: 899  LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958

Query: 433  CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
               +  +Y+ L+     +G+  +A+  + ++       + + Y+ +I+GL +  ++ EA 
Sbjct: 959  IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018

Query: 493  MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
             ++ +M +RG  PD+  Y+S++  L  AG VE+A +++ E+       +PDVFTYN L+ 
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL--AGLEPDVFTYNALIR 1076

Query: 553  ALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
                  N  H+  +  +MM  GC+P++ T
Sbjct: 1077 GYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 154/654 (23%), Positives = 281/654 (42%), Gaps = 87/654 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMR---REKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  LI    N+G  ++ + +  +M+    +   V+  + +  F  +G     +E    F
Sbjct: 299 TYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKE----F 354

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            + ++       V +F  +++V+ +   +  A   ++ +   +   ILPN  T+N +I  
Sbjct: 355 WSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM---RKQGILPNLHTYNTLICG 411

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           + R G +++A++L   M     +P  YTY T +D   K     +AV   ++M+  G  P 
Sbjct: 412 LLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPN 471

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            V  N  +  L + G L  A  + + +   G  P+ VTYN ++      G +D+AV+LL 
Sbjct: 472 IVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLS 531

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M+ + C P+ +   ++I+ L K GR  +  ++   M++ K       Y+TL+SGL KEG
Sbjct: 532 EMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEG 591

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + + A++L++ M+ K C PNT+ ++ L+D  C+  + + A ++  +M    C  +  TY+
Sbjct: 592 RVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYN 651

Query: 442 S----------------------------------LMKGFFESGKGHKAVEI-------- 459
           +                                  L+ G  + G+   A+ I        
Sbjct: 652 TVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQV 711

Query: 460 --------WKDMAKNNCVYNEVCYSVL------IHGLC-EDGKL-----------RE--A 491
                   W+D+     V  E+  +++      ++G+C ED  L           RE  A
Sbjct: 712 RFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYA 771

Query: 492 RMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
             ++ +   + G  P + +Y+ +I  L      E+A  LF +M  +     PD FT+N+L
Sbjct: 772 YQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV--GCAPDAFTFNML 829

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           L    K   I+   +L   M+ R C PD +T NI +++L  K        DF  +L    
Sbjct: 830 LAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLA-KSNNLDKALDFFYDLVSSD 888

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLYG 664
           F+    + G  I  +     L      +E +    C+P     AI     N YG
Sbjct: 889 FRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP---NCAIFNILINGYG 939



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 182/356 (51%), Gaps = 3/356 (0%)

Query: 198  VIKTVCRLGLVDNAIQLFREMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +++ +C+      A Q+F +   +    P + +Y  L+  L + +  ++A  L  +M+  
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817

Query: 257  GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            GC P   TFN+L+    K+G++    +L   M  + C P+ +TYN +I  L    NLDKA
Sbjct: 818  GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKA 877

Query: 317  VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
            +     +V+S   P   TYG +I+GL K+GR  +  R+   M +     N  I++ LI+G
Sbjct: 878  LDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILING 937

Query: 377  LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
              K G  E A +L+K+M+ +G +P+   Y+ L+D LC  G+ DEA     E+ + G   +
Sbjct: 938  YGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPD 997

Query: 437  AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
               Y+ ++ G  +S +  +A+ ++ +M     V +   Y+ L+  L   G + +A+ ++ 
Sbjct: 998  FIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYE 1057

Query: 497  QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            ++   G +PDV  Y+++I G   + + E A  ++  M+       P++ TY  L N
Sbjct: 1058 ELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMV--DGCNPNIGTYAQLPN 1111



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 169/342 (49%), Gaps = 3/342 (0%)

Query: 137  AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
            A ++F     +     T+ S+N ++  +++     +A + +  +   K++   P+  TFN
Sbjct: 771  AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM---KNVGCAPDAFTFN 827

Query: 197  LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +++    + G +    +L++EM  R C+PD  TY  ++  L K N LD+A+    ++   
Sbjct: 828  MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 257  GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
               PTP T+  LI+GL K G L  A +L + M   GC PN   +N LI+G    G+ + A
Sbjct: 888  DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947

Query: 317  VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
              L  RMV     P+  +Y  +++ L   GR  +       ++      +   Y+ +I+G
Sbjct: 948  CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007

Query: 377  LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
            L K  + E+A+ L+ +M  +G  P+   Y++L+  L   G  ++A+ +  E+   G   +
Sbjct: 1008 LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067

Query: 437  AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             FTY++L++G+  S     A  ++K+M  + C  N   Y+ L
Sbjct: 1068 VFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 120/519 (23%), Positives = 220/519 (42%), Gaps = 60/519 (11%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
           RAL ++  I  ++   +L  T T N +++ +     V++   +F  M  +    D+ TY 
Sbjct: 104 RALSYFYSI--SEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYL 161

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           T+   L     L +   +L++M+  G      ++N LI+ L ++G  G A ++   M  +
Sbjct: 162 TIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSE 221

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+  TY+ L+  L  K + +  + LL  M      PN  T+   I  L + G+  + 
Sbjct: 222 GLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEA 281

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY------ 405
             +   M++     +   Y+ LI  L   G+ E+A +L+ +M   G KP+ V+Y      
Sbjct: 282 YEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDK 341

Query: 406 -----------------------------SALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
                                        + L+D LC+    DEA      M   G   N
Sbjct: 342 FNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPN 401

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY++L+ G   +G+   A+++   M           Y   I    + G+  +A   + 
Sbjct: 402 LHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFE 461

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M ++G  P++VA ++ ++ L   G + EA  +FN +   E    PD  TYN+++    K
Sbjct: 462 KMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGL--RENGLAPDSVTYNMMMKCYSK 519

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
              +  +++LL+ M+  GC+PD++                      +N L   L+K  R 
Sbjct: 520 VGQVDEAVNLLSEMIRNGCEPDVIV---------------------VNSLIDSLYKAGRV 558

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              +++ + M    LSP   T+  ++  L +  R+Q AI
Sbjct: 559 DEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAI 597



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 153/331 (46%)

Query: 183  AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
             K + I P   ++N +I  +  +   + A  LF++M    C PD +T+  L+    K  +
Sbjct: 779  TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGK 838

Query: 243  LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            + E   L  EM    C P  +T+N++I+ L K+  L +A     ++      P   TY  
Sbjct: 839  ITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP 898

Query: 303  LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
            LI GL   G L++A+ L + M    C PN   +  +ING  K+G      ++   M    
Sbjct: 899  LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958

Query: 363  FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
               +   Y+ L+  L   G+ ++A+  + ++   G  P+ + Y+ +I+GL +  + +EA 
Sbjct: 959  IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018

Query: 423  EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
             +  EM N G   + +TY+SLM     +G   +A  +++++       +   Y+ LI G 
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078

Query: 483  CEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
                    A  V+  M+  GC P++  Y+ +
Sbjct: 1079 SLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 4/217 (1%)

Query: 124  IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
            +     K   +EEA+RLF  M D + CK     FN ++N   + G    A + +  +VN 
Sbjct: 899  LIDGLAKVGRLEEAMRLFEEMSD-YGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE 957

Query: 184  KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                I P+  ++ +++  +C  G VD A+  F E+     +PD   Y  +++GL K  R+
Sbjct: 958  ---GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRM 1014

Query: 244  DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +EA+ L +EM+  G  P   T+N L+  L   G + +A ++ + + L G  P+  TYN L
Sbjct: 1015 EEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNAL 1074

Query: 304  IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
            I G  L  N + A ++   M+   C PN  TY  + N
Sbjct: 1075 IRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 234/465 (50%), Gaps = 10/465 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +TF  +I   C+   +D+A+++   M   NC+ D+  Y  L++ L K+ R  EA   
Sbjct: 297 PTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKET 356

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           + EM  +G  P  V +  +I+G CK G++G A ++   M  +GC PN  TY++LI+GL  
Sbjct: 357 VSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQ 416

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              L KA++L+ +M      P  +TY T+I G  K     +  R+   ME+     +E  
Sbjct: 417 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 476

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ L   L K G+AE+A      ++ KG     V Y++L+DG  + G  D A  ++ +M+
Sbjct: 477 YNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 533

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           N GC A+++TYS L++   +  K ++A+ I   M  +    N V Y+++I  + ++GK  
Sbjct: 534 NEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHD 593

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A+ ++ +M+S G KP    Y+  I   C  G +EEA  L  EM        PDV TYN+
Sbjct: 594 HAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEM--ERDGVAPDVVTYNV 651

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            +N       +  +   L  M+D  C+P+  T   +   LK  L+       +++   + 
Sbjct: 652 FINGCGHMGYMDRAFSTLKRMIDASCEPNYWT---YWILLKHFLKMSLVDAHYVDTSGMW 708

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            +    T   ++++E M++  L+P   T+  ++   C+  R++ A
Sbjct: 709 NWIELDTV--WQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEA 751



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 203/399 (50%), Gaps = 6/399 (1%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  ++ ++I+ +C    V  A+ L   M    C  +++TY  L+ GLCKE R+  A  +L
Sbjct: 159 NEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVL 218

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           +EM + G  P+  T+N +I+G CK+G +  A  +   M   GC P++ TYN LI+GLC +
Sbjct: 219 EEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGE 278

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
              D+A  LL+  +     P  +T+  IING  K  R  D  RV  SM      ++   Y
Sbjct: 279 -KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAY 337

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             LI+ L K+ + ++A +   +M   G  PN V+Y+++IDG C+VGK   A E+   M +
Sbjct: 338 GVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEH 397

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC  NA+TYSSL+ G  +  K HKA+ +   M ++      + Y+ LI G C+  +   
Sbjct: 398 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 457

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++  M   G  PD  AY+ + H LC +G  EEA         +  K      TY  L
Sbjct: 458 AFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTK-----VTYTSL 512

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           ++   K  N   +  L+  M++ GC  D  T ++ L AL
Sbjct: 513 VDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQAL 551



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/518 (26%), Positives = 236/518 (45%), Gaps = 54/518 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  I   Y KA  +++A+R+  +M+   +CK  ++++  ++NV+I++  +  A E  + 
Sbjct: 301 TFTNIINGYCKAERIDDALRVKTSMLSS-NCKLDLQAYGVLINVLIKKCRFKEAKETVSE 359

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +       + PN + +  +I   C++G V  A+++FR M    C P+ +TY +L+ GL +
Sbjct: 360 MFAN---GLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQ 416

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           + +L +A+ L+ +MQ DG  P  +T+  LI G CK  E   A +L + M   G  P+E  
Sbjct: 417 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 476

Query: 300 YNTLIHGLCLK--------------------------------GNLDKAVSLLDRMVASK 327
           YN L H LC                                  GN D A  L+++MV   
Sbjct: 477 YNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 536

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C  +  TY  ++  L K  +  +   +L  M       N   Y+ +IS + KEGK + A 
Sbjct: 537 CKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAK 596

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            ++ +M+  G KP+   Y+  I   C++G+ +EAE ++ EM  +G A +  TY+  + G 
Sbjct: 597 SMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGC 656

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE----DGKLREARMVWT------- 496
              G   +A    K M   +C  N   Y +L+    +    D    +   +W        
Sbjct: 657 GHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTV 716

Query: 497 -----QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
                +M+  G  P  V YSS+I G C A  +EEA  LF+ M   +     +++T  +L+
Sbjct: 717 WQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYT--MLI 774

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              C       ++  +  M++ G  P L + +  +  L
Sbjct: 775 KCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGL 812



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/520 (26%), Positives = 225/520 (43%), Gaps = 64/520 (12%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  I   Y K   V  A+ +F  M  E  C+    +++S++  +IQ+   H+A+     I
Sbjct: 372 YTSIIDGYCKVGKVGAALEVFRLMEHE-GCRPNAWTYSSLIYGLIQDQKLHKAMAL---I 427

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +   I P  +T+  +I+  C+    DNA +LF  M      PD   Y  L   LCK 
Sbjct: 428 TKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKS 487

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            R +EA   L      G   T VT+  L++G  K G    AA L++ M  +GC  +  TY
Sbjct: 488 GRAEEAYSFLVR---KGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTY 544

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           + L+  LC +  L++A+S+LD+M  S    N V Y  II+ ++K G+      +   M  
Sbjct: 545 SVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMIS 604

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                +   Y+  IS   K G+ E+A  L  +M   G  P+ V Y+  I+G   +G  D 
Sbjct: 605 SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDR 664

Query: 421 AEEILFEMINNGCAAN-------------------------------------------- 436
           A   L  MI+  C  N                                            
Sbjct: 665 AFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMV 724

Query: 437 -------AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                  A TYSS++ GF ++ +  +A  ++  M   +   NE  Y++LI   C+     
Sbjct: 725 KHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFG 784

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A    T M+  G +P + +Y  +I GLC+ G  ++A  LF ++L +E  +  +V  + I
Sbjct: 785 KAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEV-AWKI 843

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPD-----LVTCNI 584
           L + L K  ++     LL++M +R C  D     +VT NI
Sbjct: 844 LNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMVTDNI 883



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/497 (24%), Positives = 214/497 (43%), Gaps = 60/497 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI              ++ +M+ +       ++  + +   K H  + A RLF  M
Sbjct: 406 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE-M 464

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +++       +++N + + + + G   RA E Y+ +V      ++   +T+  ++    +
Sbjct: 465 MEQNGLTPDEQAYNVLTHALCKSG---RAEEAYSFLVRK---GVVLTKVTYTSLVDGFSK 518

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF----- 259
            G  D A  L  +M    C+ D YTY  L+  LCK+ +L+EA+ +LD+M + G       
Sbjct: 519 AGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVA 578

Query: 260 ------------------------------PTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
                                         P+  T+ V I+  CK G++  A  L+  M 
Sbjct: 579 YTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEME 638

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL---- 345
             G  P+ VTYN  I+G    G +D+A S L RM+ + C PN  TY  ++   +K+    
Sbjct: 639 RDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVD 698

Query: 346 GRAVDGA------------RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
              VD +            ++L  M +   +     YS++I+G  K  + E+A  L+  M
Sbjct: 699 AHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHM 758

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             K   PN  +Y+ LI   C +    +A   + +MI  G   +  +Y  L+ G  + G  
Sbjct: 759 RGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDY 818

Query: 454 HKAVEIWKDM-AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            KA  ++ D+    +  +NEV + +L  GL + G +     + + M +R C+ D   YS 
Sbjct: 819 DKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSM 878

Query: 513 MIHGLCNA-GSVEEALK 528
           +   +  A GSV   L+
Sbjct: 879 VTDNIHEASGSVVSELR 895


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  225 bits (573), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 146/523 (27%), Positives = 250/523 (47%), Gaps = 12/523 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           VEE ++L         C   V  +N +++   + G   R L     +   +    LP  +
Sbjct: 220 VEEGLKLIEARWGA-GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEM---EAKGFLPTLV 275

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  +I  + + G ++    LF EM  R   P++  Y +++D LCK     +A+++L +M
Sbjct: 276 TYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 335

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              GC P  +TFN LI GLC  G + +A   +     +   PN+++Y  LIHG C++G L
Sbjct: 336 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 395

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A  LL  M+     P+ VT+G +I+GLV  G+  +   V   M ER+   +  IY+ L
Sbjct: 396 MAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 455

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ISGL K+     A  + ++M+EK  +P+  VY+ LIDG  R     +A +I   M + G 
Sbjct: 456 ISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 515

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  + ++++KG+ + G   +A+    +M K  C+ +E  Y+ +I G  + G L  A  
Sbjct: 516 RPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 575

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
               M+ R CKP+VV YSS+I+G C  G  + A  LF  M        P+V TY IL+ +
Sbjct: 576 WLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANM--QAEALSPNVVTYTILIGS 633

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
           L K+  +  +     +M+   C P+ VT +  +  L             +N +     + 
Sbjct: 634 LFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPC------VINSICCNTSEV 687

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                   + + ++     P+ S +  ++  LCR   ++ A++
Sbjct: 688 HGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALD 730



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 224/486 (46%), Gaps = 56/486 (11%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T+ ++ S++N + ++G   +    +   +  +   + PN   +N VI  +C+      A+
Sbjct: 273 TLVTYGSLINCLGKKGDLEKIGSLF---LEMRKRGLSPNVQIYNSVIDALCKCWSATQAM 329

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            + ++M    C+PDI T+ TL+ GLC E  + +A   L E       P  +++  LI+G 
Sbjct: 330 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 389

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C  GEL  A+ L+  M  +G  P+ VT+  LIHGL + G + +A+ + ++M   +  P+ 
Sbjct: 390 CMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDV 449

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y  +I+GL K         +L  M E+    +E++Y+TLI G  +     DA K+++ 
Sbjct: 450 NIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 509

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M  KG +P+ V  +A+I G C+ G   EA   +  M   GC  + FTY++++ G+ + G 
Sbjct: 510 MEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 569

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            + A+    DM K  C  N V YS LI+G C+ G    A  ++  M +    P+VV Y+ 
Sbjct: 570 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTI 629

Query: 513 MIHGL-----------------------------------------------CNAGSV-- 523
           +I  L                                               CN   V  
Sbjct: 630 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 689

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           ++AL +  + L  +    P    YN ++ +LC+ + +  ++D  N M  +G  P+ +T  
Sbjct: 690 KDALLVVFKKLVFD-IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT-- 746

Query: 584 IFLTAL 589
            FL+ L
Sbjct: 747 -FLSLL 751



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 210/487 (43%), Gaps = 54/487 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI      GD + +  +   MR+       + +  +  A  K     +A+ +   M
Sbjct: 276 TYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 335

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                C   + +FN+++  +  EG   +A  F    +  + +N  PN L++  +I   C 
Sbjct: 336 FAS-GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIR-RELN--PNQLSYTPLIHGFCM 391

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A  L  EM  R   PD+ T+  L+ GL    ++ EA+++ ++M     FP    
Sbjct: 392 RGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNI 451

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NVLI+GLCK   L  A  +++ M  K   P+E  Y TLI G     NL  A  + + M 
Sbjct: 452 YNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFME 511

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ V+   +I G  + G   +    + +M +     +E+ Y+T+ISG  K+G   
Sbjct: 512 HKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLN 571

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A++    M+++ CKPN V YS+LI+G C+ G  D AE +   M     + N  TY+ L+
Sbjct: 572 GALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILI 631

Query: 445 KGFFESGKGHKAVEIWKDMAKNNC--------------------VYNEVC---------- 474
              F+  K  +A   ++ M  N+C                    V N +C          
Sbjct: 632 GSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKD 691

Query: 475 --------------------YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
                               Y+ +I  LC    LREA     +M  +G  P+ + + S++
Sbjct: 692 ALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 751

Query: 515 HGLCNAG 521
           +G C+ G
Sbjct: 752 YGFCSVG 758



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 206/451 (45%), Gaps = 64/451 (14%)

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVT--------- 299
           L  M + G  PT      L+      G LG+A  + + +  + G LP EVT         
Sbjct: 121 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLP-EVTHCNRLLKLL 179

Query: 300 -------------------------YNT--LIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
                                    Y+T  L+ GLCL+G +++ + L++    + C+P+ 
Sbjct: 180 VEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHV 239

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           V Y  +I+G  + G    G  +L  ME + F      Y +LI+ L K+G  E    L+ +
Sbjct: 240 VFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLE 299

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M ++G  PN  +Y+++ID LC+     +A  IL +M  +GC  +  T+++L+ G    G 
Sbjct: 300 MRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 359

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             KA    ++  +     N++ Y+ LIHG C  G+L  A  +  +M+ RG  PDVV + +
Sbjct: 360 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGA 419

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +IHGL  AG V EAL +  +M   E +  PDV  YN+L++ LCK+  +  + ++L  M++
Sbjct: 420 LIHGLVVAGKVSEALIVREKM--TERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLE 477

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG-GFKIVEVMLQKFL 631
           +   PD                      +F+    I  F R    G   KI E M  K +
Sbjct: 478 KNVQPD----------------------EFVYATLIDGFIRSENLGDARKIFEFMEHKGV 515

Query: 632 SPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
            P   +   +++  C+   +  AI  C SN+
Sbjct: 516 RPDIVSCNAMIKGYCQFGMMSEAI-LCMSNM 545



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 192/433 (44%), Gaps = 29/433 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI    + G  +  E  L    R +    + S+  +   +     +  A  L   M
Sbjct: 346 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEM 405

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK--HMNILPNTLTFNLVIKTV 202
           +   H    V +F ++++ ++  G    AL     IV  K     + P+   +N++I  +
Sbjct: 406 MGRGHTPDVV-TFGALIHGLVVAGKVSEAL-----IVREKMTERQVFPDVNIYNVLISGL 459

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+  ++  A  +  EM  +N +PD + Y TL+DG  +   L +A  + + M+  G  P  
Sbjct: 460 CKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDI 519

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V+ N +I G C+ G +  A   + NM   GC+P+E TY T+I G   +GNL+ A+  L  
Sbjct: 520 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 579

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+  KC PN VTY ++ING  K G       +  +M+      N   Y+ LI  LFK+ K
Sbjct: 580 MIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDK 639

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGL------------CRVGKPDEAEEILFE--- 427
              A   ++ M+   C PN V    L++GL            C   +    + +L     
Sbjct: 640 VLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKK 699

Query: 428 -MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            + + G   N+  Y++++          +A++    MAK   V N + +  L++G C  G
Sbjct: 700 LVFDIGDPRNS-AYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVG 758

Query: 487 KLREARMVWTQML 499
           K     M W  +L
Sbjct: 759 K----SMNWRTIL 767



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 167/376 (44%), Gaps = 43/376 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF +LI     +G  K  E ++ R +  +R V     I+  +     K H++  A  +  
Sbjct: 416 TFGALIHGLVVAG--KVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILE 473

Query: 143 TMV------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
            M+      DEF     +  F    N+    G   +  EF       +H  + P+ ++ N
Sbjct: 474 EMLEKNVQPDEFVYATLIDGFIRSENL----GDARKIFEFM------EHKGVRPDIVSCN 523

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +IK  C+ G++  AI     M    C PD +TY T++ G  K+  L+ A+  L +M   
Sbjct: 524 AMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKR 583

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            C P  VT++ LING CK G+   A  L  NM  +   PN VTY  LI  L  K  + +A
Sbjct: 584 KCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 643

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA------------RVLMSMEERKFH 364
               + M+ + C PN+VT   ++NGL      V  +             +L+  ++  F 
Sbjct: 644 GLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFD 703

Query: 365 VNE---YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK---- 417
           + +     Y+ +I  L +     +A+    +M +KG  PN + + +L+ G C VGK    
Sbjct: 704 IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNW 763

Query: 418 ----PDEAEEILFEMI 429
               P+E ++  FE+I
Sbjct: 764 RTILPNEFQQEEFEII 779


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 245/527 (46%), Gaps = 31/527 (5%)

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           YGK     EA  LF  M ++  C   + +++ +++   + G    A+ F + +  A   +
Sbjct: 205 YGK---FNEAELLFKEMGEKGLCANHI-TYSILIDSFCRRGEMDNAIGFLDKMTKA---S 257

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I      +N +I   C+LG    A   F EM  +   P + TY +L+ G C E    +A 
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            + +EM   G  P   TF  +I+GLC+   +  A +L   M  +  +P+EVTYN +I G 
Sbjct: 318 KVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGH 377

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  GN+ +A  LLD MV    +P+  TY  +I+GL  +GR  +    +  + +    +N 
Sbjct: 378 CRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNN 437

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             YS L+ G  KEG+ +DA+   + M+E+G   + V Y+ LIDG  R         +L E
Sbjct: 438 MCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKE 497

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M N+G   +A  Y++++    ++G   +A  +W  M    C+ N V Y+ LI+GLC+ G 
Sbjct: 498 MHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGL 557

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + +A ++  + L     P+ + Y   +  L   G++E+A++L + ML           +Y
Sbjct: 558 MDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML---KGFLATTVSY 614

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           NIL+   C+   I  +  LL+ M D    PD +T   + T + E+               
Sbjct: 615 NILIRGFCRLGKIEEATKLLHGMTDNDILPDYIT---YSTIIYEQC-------------- 657

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               KR       K+   ML K L P T  +  +V   C    ++ A
Sbjct: 658 ----KRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKA 700



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/486 (30%), Positives = 233/486 (47%), Gaps = 42/486 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  +   G+  +    L +M +         +  +   Y K      A   F  M
Sbjct: 229 TYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEM 288

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +D+     TV ++ S+++    EG +H+A + YN +  AK   I PNT TF  +I  +CR
Sbjct: 289 IDK-GLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT-AK--GISPNTYTFTAIISGLCR 344

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
             ++  AI+LF EM  R   P   TY  +++G C+   + EA  LLDEM   G  P   T
Sbjct: 345 ANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYT 404

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+GLC  G +  A + VD++       N + Y+ L+HG C +G    AVS    MV
Sbjct: 405 YRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMV 464

Query: 325 ASKCMPNEVTYGTIINGLVKL--GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
                 + V Y  +I+G  +    RA+ G  +L  M       +  IY+ +I    K G 
Sbjct: 465 ERGVAMDLVCYAILIDGTAREHDTRALFG--LLKEMHNHGLRPDAVIYTNMIDRHSKAGN 522

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE---------EILFEMINNGC 433
            ++A  LW  M+++GC PN V Y+ALI+GLC+ G  D+AE         ++    I  GC
Sbjct: 523 LKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGC 582

Query: 434 -------------------------AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
                                     A   +Y+ L++GF   GK  +A ++   M  N+ 
Sbjct: 583 FLDHLTRGGNMEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDI 642

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           + + + YS +I+  C+   L+EA  +W  ML +G KPD +AYS ++HG C AG +E+A +
Sbjct: 643 LPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFE 702

Query: 529 LFNEML 534
           L +EM+
Sbjct: 703 LRDEMI 708



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 153/541 (28%), Positives = 245/541 (45%), Gaps = 31/541 (5%)

Query: 136 EAIRLFHTMVDEF-HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +A  + H M  EF  CK ++  +N +++ + +      ALE  N ++      +  N +T
Sbjct: 149 KAKEMIHWM--EFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQK---GLEANVVT 203

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +          G  + A  LF+EM  +    +  TY  L+D  C+   +D A+  LD+M 
Sbjct: 204 Y---------YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMT 254

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
                 T   +N LING CK G    A    D M  KG  P  VTY +LI G C +G   
Sbjct: 255 KASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWH 314

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA  + + M A    PN  T+  II+GL +     +  R+   M+ERK   +E  Y+ +I
Sbjct: 315 KAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMI 374

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G  + G   +A  L  +M+ KG  P+T  Y  LI GLC VG+  EA+E + ++  +   
Sbjct: 375 EGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHK 434

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N   YS+L+ G+ + G+   AV   + M +     + VCY++LI G   +   R    +
Sbjct: 435 LNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGL 494

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +M + G +PD V Y++MI     AG+++EA  L++ M  ++    P+V TY  L+N L
Sbjct: 495 LKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIM--VDEGCLPNVVTYTALINGL 552

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD------------GTDF 602
           CK   +  +  L    +     P+ +T   FL  L       +              T  
Sbjct: 553 CKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLATTV 612

Query: 603 LNELAIRLFKR-QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSN 661
              + IR F R  +     K++  M    + P   T+  ++ E C+   +Q AI K W  
Sbjct: 613 SYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAI-KLWHT 671

Query: 662 L 662
           +
Sbjct: 672 M 672



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 144/546 (26%), Positives = 234/546 (42%), Gaps = 78/546 (14%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K  N++P   T + ++  + R    ++ + LF ++   N +PDIY Y  ++  LC+    
Sbjct: 88  KDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDF 147

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN--------------------------GE 277
           ++A  ++  M+ + C  + V +NVLI+GLCK+                          G+
Sbjct: 148 NKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGK 207

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
              A  L   M  KG   N +TY+ LI   C +G +D A+  LD+M  +        Y +
Sbjct: 208 FNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNS 267

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +ING  KLG A         M ++        Y++LISG   EG+   A K++ +M  KG
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327

Query: 398 CKPNTVVYSALIDGLCRV-----------------------------------GKPDEAE 422
             PNT  ++A+I GLCR                                    G   EA 
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAF 387

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +L EM+  G   + +TY  L+ G    G+  +A E   D+ K++   N +CYS L+HG 
Sbjct: 388 HLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGY 447

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C++G+ ++A      M+ RG   D+V Y+ +I G            L  EM       +P
Sbjct: 448 CKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEM--HNHGLRP 505

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT--------CNIFLTALKEKLE 594
           D   Y  +++   K  N+  +  L + M+D GC P++VT        C   L    E L 
Sbjct: 506 DAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLS 565

Query: 595 APQDGTDFL-NELAIRLFKRQRTSGG-----FKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                +D   N +    F    T GG      ++   ML+ FL+  T ++  +++  CR 
Sbjct: 566 KETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKGFLA-TTVSYNILIRGFCRL 624

Query: 649 KRIQAA 654
            +I+ A
Sbjct: 625 GKIEEA 630



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 211/495 (42%), Gaps = 88/495 (17%)

Query: 57  GNAKSEQPFSDEIFNS--TPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKR 114
           GNA + + + DE+ +   TP + +Y        SLI  Y N G++     V   M  +  
Sbjct: 276 GNASAAKYYFDEMIDKGLTPTVVTYT-------SLISGYCNEGEWHKAFKVYNEMTAKGI 328

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
                +F  I     +A+++ EAIRLF  M                              
Sbjct: 329 SPNTYTFTAIISGLCRANMMAEAIRLFGEM------------------------------ 358

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
                    K   I+P+ +T+N++I+  CR G +  A  L  EM  +   PD YTY  L+
Sbjct: 359 ---------KERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLI 409

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA------------- 281
            GLC   R+ EA   +D++  D      + ++ L++G CK G    A             
Sbjct: 410 SGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVA 469

Query: 282 ------AKLVDN----------------MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
                 A L+D                 M   G  P+ V Y  +I      GNL +A  L
Sbjct: 470 MDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGL 529

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV--NEYIYSTLISGL 377
            D MV   C+PN VTY  +INGL K G  +D A  L+S E     V  N   Y   +  L
Sbjct: 530 WDIMVDEGCLPNVVTYTALINGLCKAG-LMDKAE-LLSKETLVSDVTPNHITYGCFLDHL 587

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            + G  E A++L   M+ KG    TV Y+ LI G CR+GK +EA ++L  M +N    + 
Sbjct: 588 TRGGNMEKAVQLHHAML-KGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDY 646

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TYS+++    +     +A+++W  M       + + YS L+HG C  G+L +A  +  +
Sbjct: 647 ITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDE 706

Query: 498 MLSRGCKPDVVAYSS 512
           M+ RG + + V   S
Sbjct: 707 MIRRGMRSNHVTPKS 721



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 49/282 (17%)

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P     SAL++GL R  + ++   +  ++++     + + YS++++   E    +KA E+
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCED--------------------------GKLREARM 493
              M  N C  + V Y+VLIHGLC+                           GK  EA +
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAEL 213

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M  +G   + + YS +I   C  G ++ A+   ++M   +   +  V+ YN L+N 
Sbjct: 214 LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKM--TKASIEFTVYPYNSLING 271

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
            CK  N S +    + M+D+G  P +VT    ++              + NE        
Sbjct: 272 YCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISG-------------YCNE-------- 310

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                 FK+   M  K +SP T T+  ++  LCR   +  AI
Sbjct: 311 GEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAI 352


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 238/499 (47%), Gaps = 7/499 (1%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           +    S    +I    +S  F S  ++ Y    E      + +  I  +Y ++  +  +I
Sbjct: 55  FSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSI 114

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
             F+ MVD      +   FN +L  ++    +++   F+N         ++ +  +F ++
Sbjct: 115 SYFNEMVDNGFVPGS-NCFNYLLTFVVGSSSFNQWWSFFNE----NKSKVVLDVYSFGIL 169

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           IK  C  G ++ +  L  E+      P++  Y TL+DG CK+  +++A  L  EM   G 
Sbjct: 170 IKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL 229

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
                T+ VLINGL KNG   +  ++ + M   G  PN  TYN +++ LC  G    A  
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           + D M       N VTY T+I GL +  +  +  +V+  M+    + N   Y+TLI G  
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
             GK   A+ L + +  +G  P+ V Y+ L+ G CR G    A +++ EM   G   +  
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TY+ L+  F  S    KA+++   M +   V +   YSVLIHG C  G++ EA  ++  M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           + + C+P+ V Y++MI G C  GS   ALKL  EM   E +  P+V +Y  ++  LCK+ 
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM--EEKELAPNVASYRYMIEVLCKER 527

Query: 559 NISHSIDLLNSMMDRGCDP 577
               +  L+  M+D G DP
Sbjct: 528 KSKEAERLVEKMIDSGIDP 546



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 206/391 (52%), Gaps = 23/391 (5%)

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           +F +LI G C+ GE+ ++  L+  +   G  PN V Y TLI G C KG ++KA  L   M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                + NE TY  +INGL K G    G  +   M+E     N Y Y+ +++ L K+G+ 
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +DA +++ +M E+G   N V Y+ LI GLCR  K +EA +++ +M ++G   N  TY++L
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + GF   GK  KA+ + +D+       + V Y++L+ G C  G    A  +  +M  RG 
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           KP  V Y+ +I     + ++E+A++L   M   E    PDV TY++L++  C +  ++ +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSME--ELGLVPDVHTYSVLIHGFCIKGQMNEA 462

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
             L  SM+++ C+P+ V  N  +      L   ++G+ +    A++L K           
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMI------LGYCKEGSSY---RALKLLKE---------- 503

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M +K L+P  +++  +++ LC+ ++ + A
Sbjct: 504 --MEEKELAPNVASYRYMIEVLCKERKSKEA 532



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/356 (25%), Positives = 175/356 (49%), Gaps = 24/356 (6%)

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y  +I+      +L+ ++S  + MV +  +P    +  ++  +V    + +      +  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVG-SSSFNQWWSFFNEN 155

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           + K  ++ Y +  LI G  + G+ E +  L  ++ E G  PN V+Y+ LIDG C+ G+ +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A+++ FEM   G  AN  TY+ L+ G F++G   +  E+++ M ++    N   Y+ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           + LC+DG+ ++A  V+ +M  RG   ++V Y+++I GLC    + EA K+ ++M      
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK--SDG 333

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             P++ TYN L++  C    +  ++ L   +  RG  P LVT NI ++            
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG----------- 382

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                       ++  TSG  K+V+ M ++ + P   T+  ++    R   ++ AI
Sbjct: 383 ----------FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 74/345 (21%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +E+A  LF  M  +       +++  ++N + + G+  +  E Y  +   +   + PN  
Sbjct: 214 IEKAKDLFFEM-GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM---QEDGVFPNLY 269

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N V+  +C+ G   +A Q+F EM  R    +I TY TL+ GLC+E +L+EA  ++D+M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329

Query: 254 QVDGC-----------------------------------FPTPVTFNVLINGLCKNGEL 278
           + DG                                     P+ VT+N+L++G C+ G+ 
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389

Query: 279 GRAAKLVDNMFLKGCLPNEVTY-----------------------------------NTL 303
             AAK+V  M  +G  P++VTY                                   + L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           IHG C+KG +++A  L   MV   C PNEV Y T+I G  K G +    ++L  MEE++ 
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
             N   Y  +I  L KE K+++A +L ++M++ G  P+T + S +
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/290 (19%), Positives = 133/290 (45%), Gaps = 24/290 (8%)

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           +Y  +I+   +      ++  + +M++ G  P +  ++ L+  +      ++     F  
Sbjct: 96  LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS-FFNE 154

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
             +    + +++  L+KG  E+G+  K+ ++  ++ +     N V Y+ LI G C+ G++
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A+ ++ +M   G   +   Y+ +I+GL   G  ++  +++ +M   E    P+++TYN
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ--EDGVFPNLYTYN 272

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            ++N LCK      +  + + M +RG   ++VT N  +  L  +++        LNE   
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK--------LNEAN- 323

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
                       K+V+ M    ++P   T+  ++   C   ++  A++ C
Sbjct: 324 ------------KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 261/582 (44%), Gaps = 88/582 (15%)

Query: 83  DSTFYSLIQHY----ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           D   YS+  H      NSG   SL   L  MR    +  E +F  +  A  K   V EA+
Sbjct: 192 DQEAYSIFVHLLCLKPNSGYALSL---LREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 248

Query: 139 RLFHTMVDEFHCKRTVK--SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           RL   MV+   C +++      S++     +G    AL   N I  +    ++PN +T++
Sbjct: 249 RLKDDMVN---CGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISES---GLVPNKVTYS 302

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY---------------------------- 228
           ++I   C+ G ++ A + + EM  +     +Y                            
Sbjct: 303 VLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALES 362

Query: 229 ------TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
                 T+ TL+  LCKE +++EA  L DE+   G  P  V++N +I G C+   +  A 
Sbjct: 363 GLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAAC 422

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           K+   M   G  PN VT+  L+ G   KG+++ A S+  RM  +  +P + T G II GL
Sbjct: 423 KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGL 482

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K GR+ +G  +      + F      Y+T+I G  KEG    A  ++++M E G  P+T
Sbjct: 483 CKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPST 542

Query: 403 VVYSALIDGLCRVGKPD-----------------------------------EAEEILFE 427
           V Y++LIDG C+    D                                    A E+L E
Sbjct: 543 VTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNE 602

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           +   G + N F Y+S++ GF       +A++++K M       +   Y+ LI GL + G+
Sbjct: 603 LRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGR 662

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFT 546
           L  A  + T+MLS+G  PD  A++ +I+GLCN G  E A K+  +M     K+  P V  
Sbjct: 663 LLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM---NGKNMIPSVLI 719

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           YN L+    K+ N+  +  L + M+DRG  PD +T +I +  
Sbjct: 720 YNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 205/435 (47%), Gaps = 8/435 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
           +F SV+   ++EG    AL   + +VN  K MN+   T     ++K  C  G + +A+ L
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATS----LMKGYCMQGNLRSALVL 285

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
             E+      P+  TY  L+DG CK   +++A     EM+  G   +  + N ++ G  K
Sbjct: 286 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 345

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
                 A  + ++    G L N  T+NTL+  LC +G +++A +L D ++A    PN V+
Sbjct: 346 CQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 404

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y  II G  +        +V   M +  F  N   ++ L+ G FK+G  E+A  ++ +M 
Sbjct: 405 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 464

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           +    P       +I GLC+ G+  E  ++  + ++ G       Y++++ GF + G  +
Sbjct: 465 DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 524

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A  ++++M +     + V Y+ LI G C+   +  A  +   M  +G K D+ AY ++I
Sbjct: 525 LASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLI 584

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G C    ++ A +L NE+        P+ F YN ++      +N+  +IDL   M++ G
Sbjct: 585 DGFCKRRDMKSAHELLNELR--GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 642

Query: 575 CDPDLVTCNIFLTAL 589
              DL T    +  L
Sbjct: 643 IPCDLKTYTSLIDGL 657



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 210/461 (45%), Gaps = 41/461 (8%)

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
           IQEG     LE   H + AK   +  +   +++ +  +C       A+ L REM      
Sbjct: 169 IQEG---NILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWI 225

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P   T+ +++    KE  + EA+ L D+M   G          L+ G C  G L  A  L
Sbjct: 226 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVL 285

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           V+ +   G +PN+VTY+ LI G C  GN++KA      M       +  +  +I+ G +K
Sbjct: 286 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 345

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
             ++   A  + +        N + ++TL+S L KEGK  +A  LW +++ KG  PN V 
Sbjct: 346 C-QSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 404

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ +I G CR    + A ++  EM++NG   NA T++ LM G+F+ G    A  I+  M 
Sbjct: 405 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 464

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG---------------------- 502
             N +  +    ++I GLC+ G+  E R ++ + +S+G                      
Sbjct: 465 DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 524

Query: 503 ---------CK----PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
                    C+    P  V Y+S+I G C   +++ ALKL N+M       + D+  Y  
Sbjct: 525 LASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK--RKGLKMDIKAYGT 582

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           L++  CK+ ++  + +LLN +   G  P+    N  +T  K
Sbjct: 583 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFK 623



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 198/435 (45%), Gaps = 37/435 (8%)

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G +  A Q F +   R  E D   Y   +  LC +     A+ LL EM+  G  P   TF
Sbjct: 172 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 231

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             +I    K G +  A +L D+M   G   N     +L+ G C++GNL  A+ L++ +  
Sbjct: 232 TSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISE 291

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH--------------------- 364
           S  +PN+VTY  +I+G  K G           M+ +                        
Sbjct: 292 SGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQN 351

Query: 365 -------------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
                         N + ++TL+S L KEGK  +A  LW +++ KG  PN V Y+ +I G
Sbjct: 352 AFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILG 411

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            CR    + A ++  EM++NG   NA T++ LM G+F+ G    A  I+  M   N +  
Sbjct: 412 HCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPT 471

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
           +    ++I GLC+ G+  E R ++ + +S+G  P  + Y+++I G    G++  A  ++ 
Sbjct: 472 DTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYR 531

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           EM   E    P   TY  L++  CK +NI  ++ LLN M  +G   D+      +    +
Sbjct: 532 EM--CEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCK 589

Query: 592 KLEAPQDGTDFLNEL 606
           + +  +   + LNEL
Sbjct: 590 RRDM-KSAHELLNEL 603



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 184/380 (48%), Gaps = 19/380 (5%)

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G   ++  Y+  +H LCLK N   A+SLL  M A+  +P E T+ ++I   VK G   +
Sbjct: 187 RGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAE 246

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
             R+   M      +N  + ++L+ G   +G    A+ L  ++ E G  PN V YS LID
Sbjct: 247 ALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 306

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G C+ G  ++A E   EM   G  ++ ++ +S+++G+ +      A  ++ D A  + + 
Sbjct: 307 GCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND-ALESGLA 365

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N   ++ L+  LC++GK+ EA  +W +++++G  P+VV+Y+++I G C   ++  A K++
Sbjct: 366 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 425

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
            EM  L+    P+  T+ IL++   K+ +I ++  + + M D    P   T  I +  L 
Sbjct: 426 KEM--LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 483

Query: 591 EKLEAPQDGTDFLNELAIRLF---------------KRQRTSGGFKIVEVMLQKFLSPQT 635
            K     +G D  N+   + F               K    +    +   M +  ++P T
Sbjct: 484 -KAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPST 542

Query: 636 STWERVVQELCRPKRIQAAI 655
            T+  ++   C+   I  A+
Sbjct: 543 VTYTSLIDGFCKGNNIDLAL 562



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 168/339 (49%), Gaps = 13/339 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ----EGLYHRALE 175
           +F  +   Y K   +E A  +FH M D       +   ++ L +II+     G      +
Sbjct: 439 TFTILMDGYFKKGDIENAFSIFHRMKDA-----NILPTDTTLGIIIKGLCKAGRSFEGRD 493

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
            +N  V+      +P  + +N +I    + G ++ A  ++REM      P   TY +L+D
Sbjct: 494 LFNKFVS---QGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLID 550

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           G CK N +D A+ LL++M+  G       +  LI+G CK  ++  A +L++ +   G  P
Sbjct: 551 GFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSP 610

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N   YN++I G     N+++A+ L  +MV      +  TY ++I+GL+K GR +  + + 
Sbjct: 611 NRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIH 670

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M  +    ++  ++ LI+GL  +G+ E+A K+ + M  K   P+ ++Y+ LI G  + 
Sbjct: 671 TEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKE 730

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           G   EA  +  EM++ G   +  TY  L+ G F+ G G+
Sbjct: 731 GNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK-GDGN 768



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/324 (23%), Positives = 153/324 (47%), Gaps = 21/324 (6%)

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
           ++ G  ++  +  +  + R   +++  YS  +  L  +  +  A+ L ++M   G  P  
Sbjct: 169 IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPE 228

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
             ++++I    + G   EA  +  +M+N G + N    +SLMKG+   G    A+ +  +
Sbjct: 229 GTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 288

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           ++++  V N+V YSVLI G C++G + +A   +++M ++G +  V + +S++ G     S
Sbjct: 289 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQS 348

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
            + A  +FN+ L        +VFT+N LL+ LCK+  ++ + +L + ++ +G  P++V+ 
Sbjct: 349 WQNAFTMFNDAL---ESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSY 405

Query: 583 NIFLTA-------------LKEKLE---APQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           N  +                KE L+    P   T     L    FK+      F I   M
Sbjct: 406 NNIILGHCRKDNINAACKVYKEMLDNGFTPNAVT--FTILMDGYFKKGDIENAFSIFHRM 463

Query: 627 LQKFLSPQTSTWERVVQELCRPKR 650
               + P  +T   +++ LC+  R
Sbjct: 464 KDANILPTDTTLGIIIKGLCKAGR 487


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 141/438 (32%), Positives = 225/438 (51%), Gaps = 20/438 (4%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P    +  ++  L K  +   A+ L  +M+ +G  P  +T N+L+N   + G +  +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
              +  KG  P+ VT+  LI GLCLKG + KA+   D++VA     ++V+YGT+INGL +
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
           +G      ++L  ++ +    N  +YST+I  + K+    DA  L+ +M+ K   P+ V 
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           YS+LI G C VGK   A ++   MI++    N +T+S L+ GF + GK  +A  +   M 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           K N   + V Y+ L+ G C   ++ +A+ ++  M  RG  PDV +YS MI+G C    V+
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN- 583
           EA+KLF EM C   +  P+V TYN L++ LCK    S +++L++ M DRG   +++T N 
Sbjct: 356 EAMKLFEEMHC--KQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413

Query: 584 ---------------IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
                          + LT +KEK   P   T     L   L K  R     K+ E +L 
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDIFT--YTVLINGLCKVGRLDDAQKVFEDLLV 471

Query: 629 KFLSPQTSTWERVVQELC 646
           K  SP   T+  ++   C
Sbjct: 472 KGYSPNIYTYTSLINGFC 489



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 215/405 (53%), Gaps = 2/405 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +TF ++IK +C  G V  A+    ++  +  + D  +Y TL++GLC+      AV L
Sbjct: 126 PDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQL 185

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  +      P  V ++ +I+ +CK+  +  A  L   M  K   P+ VTY++LI G C+
Sbjct: 186 LRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCV 245

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L  AV L +RM++    PN  T+  +I+G  K G+  +   VL  M ++   ++   
Sbjct: 246 VGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVT 305

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++L+ G     +   A  L+  M ++G  P+   YS +I+G C++   DEA ++  EM 
Sbjct: 306 YNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMH 365

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                 N  TY+SL+ G  +SG+   A+E+  +M       N + Y+ ++  +C++  + 
Sbjct: 366 CKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVD 425

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A ++ T++  +G +PD+  Y+ +I+GLC  G +++A K+F ++L       P+++TY  
Sbjct: 426 KAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLV--KGYSPNIYTYTS 483

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
           L+N  C +      + +L+ M D GC P+ +T  I + +L EK E
Sbjct: 484 LINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDE 528



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 234/420 (55%), Gaps = 7/420 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F  ++  +  +G  H+AL F++ +V A+   +  + +++  +I  +CR+G    A+QL 
Sbjct: 130 TFTILIKGLCLKGEVHKALYFHDKVV-AQGFQL--DQVSYGTLINGLCRVGETKAAVQLL 186

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R +  +   P++  Y T++D +CK+  +++A  L  EM      P  VT++ LI+G C  
Sbjct: 187 RRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVV 246

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A  L + M      PN  T++ LI G C +G + +A ++L  M+      + VTY
Sbjct: 247 GKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTY 306

Query: 336 GTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
            ++++G   L + V+ A+ L + M +R    + + YS +I+G  K    ++AMKL+++M 
Sbjct: 307 NSLMDGYC-LVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMH 365

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            K   PN V Y++L+DGLC+ G+   A E++ EM + G  +N  TY+S++    ++    
Sbjct: 366 CKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVD 425

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           KA+ +   + +     +   Y+VLI+GLC+ G+L +A+ V+  +L +G  P++  Y+S+I
Sbjct: 426 KAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +G CN G  +E L + ++M   +    P+  TY IL+++L ++     +  LL  M+ RG
Sbjct: 486 NGFCNKGFFDEGLAMLSKM--KDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 197/358 (55%), Gaps = 3/358 (0%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           VD    +  V  ++++++ + ++ L + A + Y  +V+ +   I P+ +T++ +I   C 
Sbjct: 189 VDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR---ISPDVVTYSSLISGFCV 245

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G +  A+ LF  M   N  P++YT+  L+DG CKE ++ EA  +L  M         VT
Sbjct: 246 VGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVT 305

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++G C   ++ +A  L + M  +G  P+  +Y+ +I+G C    +D+A+ L + M 
Sbjct: 306 YNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMH 365

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
             +  PN VTY ++++GL K GR      ++  M +R    N   Y++++  + K    +
Sbjct: 366 CKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVD 425

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+ L  ++ EKG +P+   Y+ LI+GLC+VG+ D+A+++  +++  G + N +TY+SL+
Sbjct: 426 KAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
            GF   G   + + +   M  N C+ N + Y +LIH L E  +  +A  +  +M++RG
Sbjct: 486 NGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARG 543



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 109/210 (51%), Gaps = 39/210 (18%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKR---TVKSFNSVLNVIIQEGLYHRALEF 176
           S+  +   + K  +V+EA++LF    +E HCK+    V ++NS+++ + + G    ALE 
Sbjct: 340 SYSIMINGFCKIKMVDEAMKLF----EEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALEL 395

Query: 177 ---------------YNHIVNA-----------------KHMNILPNTLTFNLVIKTVCR 204
                          YN I++A                 K   I P+  T+ ++I  +C+
Sbjct: 396 VDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCK 455

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G +D+A ++F ++ V+   P+IYTY +L++G C +   DE + +L +M+ +GC P  +T
Sbjct: 456 VGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAIT 515

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           + +LI+ L +  E  +A KL+  M  +G L
Sbjct: 516 YEILIHSLFEKDENDKAEKLLREMIARGLL 545


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 217/417 (52%), Gaps = 6/417 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   + KA  +E A +L   M +  H    V + +S++  +   G   RA++++   V  
Sbjct: 111 LIGGFCKAGDMERAFQLLAEMKERGHSPDVV-THSSIVQALCNTGNLSRAMQYFRESVEC 169

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P+++ FN+++  +C+   +  A Q+  EM  R   PD+ TY +L+DGLCK  R+
Sbjct: 170 A-----PDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRM 224

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA  LL+ M      P  VT+N LI G CK G  G A +L++ M   G  P+ VT+N+L
Sbjct: 225 EEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSL 284

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C K  +DKA  +L  M    C PN VTY  +I+GL   GRA +   +L  M+ R  
Sbjct: 285 ISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGI 344

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y++LI    +  + E A ++   M+E+G  P+ + Y  L   L +  + DEA  
Sbjct: 345 LPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFA 404

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L  M + G   N FT++SLM+G   S +  +A  +   M +  C      Y VL+ GLC
Sbjct: 405 LLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           + G++ +A+ V   M+S G +P V +  +++H L   G  + AL  F++++  E K+
Sbjct: 465 KAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKA 521



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 145/473 (30%), Positives = 234/473 (49%), Gaps = 36/473 (7%)

Query: 187 NILPNTLTFNL-VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT---LMDGLCKENR 242
           N++PNT+   L VIK V      D ++  FR +   +    I+   T   L+  L K  R
Sbjct: 31  NLVPNTVGRVLQVIKDV------DVSLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARR 84

Query: 243 LDEAVLLL-DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
             +A  +  DE+    C    +T+N LI G CK G++ RA +L+  M  +G  P+ VT++
Sbjct: 85  HHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHS 144

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           +++  LC  GNL +A+      V  +C P+ V +  +++GL K  +  +  +++  M ER
Sbjct: 145 SIVQALCNTGNLSRAMQYFRESV--ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSER 202

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               +   Y++LI GL K  + E+A +L + M+++  +PN V Y+ LI G C+ G    A
Sbjct: 203 GIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLA 262

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            +++  MI +G   +  T++SL+ GF +  K  KA E+   M K  C  N V Y+VLI G
Sbjct: 263 HQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISG 322

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           LC+ G+  EA  + ++M  RG  PD++ Y+S+I   C    +E+A ++ N M  +E    
Sbjct: 323 LCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLM--VERGVI 380

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
           PD  +Y  L  AL K      +  LL++M D G  P+L T                    
Sbjct: 381 PDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFT-------------------- 420

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             N L   L   +R      ++ VM +    P  ST+E +V  LC+  R+  A
Sbjct: 421 -FNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 159/324 (49%), Gaps = 20/324 (6%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ-------EGLYHRALEFYNHIVN 182
           K++ +EEA +L  TMV     KR V+      N +I         GL H+ +E    I +
Sbjct: 220 KSYRMEEARQLLETMV-----KRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIE--RMIQS 272

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
             H    P+ +TFN +I   C+   +D A ++   M    C P++ TY  L+ GLC   R
Sbjct: 273 GTH----PDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGR 328

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            +EA  LL EM   G  P  +T+N LI   C+N ++ +A ++ + M  +G +P+ ++Y T
Sbjct: 329 ANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCT 388

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER- 361
           L   L      D+A +LLD M  +  +PN  T+ +++ GL    R +D AR L+++  R 
Sbjct: 389 LAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLC-CSRRLDEARHLLAVMRRV 447

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
                   Y  L++GL K G+ +DA ++   M+ +G +P       ++  L R GK D A
Sbjct: 448 GCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLA 507

Query: 422 EEILFEMINNGCAANAFTYSSLMK 445
                +++     A   +Y  L++
Sbjct: 508 LHYFDQVVAAESKACDPSYQKLLE 531



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 125/290 (43%), Gaps = 39/290 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y  +G       ++ RM +        +F  +   + +   +++A  + H M
Sbjct: 245 TYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLM 304

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                C   + ++N +++ +   G  + A E  + +       ILP+ +T+N +I   CR
Sbjct: 305 KKGL-CAPNLVTYNVLISGLCDAGRANEACELLSEM---DGRGILPDIITYNSLIGIFCR 360

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTL------------------------------- 233
              ++ A Q+   M  R   PD  +YCTL                               
Sbjct: 361 NFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFT 420

Query: 234 ----MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
               M+GLC   RLDEA  LL  M+  GC P   T+ VL+ GLCK G +  A +++  M 
Sbjct: 421 FNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMV 480

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            +G  P   +  T++H L  +G  D A+   D++VA++    + +Y  ++
Sbjct: 481 SEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLL 530


>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
 gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/509 (29%), Positives = 248/509 (48%), Gaps = 7/509 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           + F    K   Y      + S I   A +GD  +++ V  + R    ++   +   + K+
Sbjct: 82  KFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKS 141

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           +G   +VEE + ++  M  E   + ++ ++N +LN ++       A      + N K   
Sbjct: 142 FGSLGMVEELLWVWRGM-KENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGK--- 197

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I P+ +T+N +IK  C++G    A + FR+M +RN  PD  TY TL+     E   D  +
Sbjct: 198 IGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCL 257

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L  EM  +G    P  ++++I GLCK G+      + + M  KGC  N   Y  LI   
Sbjct: 258 SLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSN 317

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
              GN+ +A+ L +RM      P+ VTYG ++N + K GR  +    L         VN 
Sbjct: 318 AKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNA 377

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
            +YS+LI GL K G+  +A KL+++M++KGC P++  Y+ALID L + GK DEA      
Sbjct: 378 MLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKR 437

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M + GC    +TY+ ++ G F   K  +A+++W  M           +  L  GLC  GK
Sbjct: 438 MEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGK 497

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A  +  ++   G  P+  A+  M++ LC AG ++EA KL +  +    +    V T 
Sbjct: 498 VARACKLLDELAPMGVIPE-TAFEDMLNVLCKAGRIKEACKLADGFVDRGREIPGRVRT- 555

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCD 576
            +L+NAL K  N   ++ L++S +  G D
Sbjct: 556 -VLINALRKAGNADLALKLMHSKIGIGYD 583



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 178/389 (45%), Gaps = 27/389 (6%)

Query: 270 NGLCKN-GELGRAAKLV---DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N L K+ G LG   +L+     M   G  P+  TYN L++GL     ++ A  +L+ M  
Sbjct: 136 NSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMEN 195

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
            K  P+ VTY T+I G  ++G+          ME R    ++  Y TLI   + EG  + 
Sbjct: 196 GKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDL 255

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
            + L+ +M E G +     YS +I GLC+ GK  E   +  +MI  GC  N   Y++L+ 
Sbjct: 256 CLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALID 315

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
              + G   +A+ +++ M K     + V Y V+++ +C+ G+L EA          G   
Sbjct: 316 SNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAV 375

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           + + YSS+I GL  AG V EA KLF EM+  +    PD + YN L++AL K      ++ 
Sbjct: 376 NAMLYSSLIDGLGKAGRVHEAEKLFEEMV--KKGCPPDSYCYNALIDALAKCGKTDEALA 433

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
               M D GCD  + T  I +                       LF+  +     K+ ++
Sbjct: 434 FFKRMEDEGCDQTVYTYTIMING---------------------LFREHKNEEALKMWDM 472

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           M+ K ++P  + +  +   LC   ++  A
Sbjct: 473 MIDKGITPTAAAFRALSIGLCLSGKVARA 501



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 67/301 (22%), Positives = 121/301 (40%), Gaps = 31/301 (10%)

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           +++K+  N   Y + I  L   G  ++   ++ +    G   N    ++LI     +G  
Sbjct: 89  KQKKYTHNLQCYVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMV 148

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           +E   +   M  NG   + FTY+ L+ G   S     A  + + M       + V Y+ +
Sbjct: 149 EELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTM 208

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----L 534
           I G C+ GK ++A   +  M  R   PD + Y ++I      G  +  L L++EM    L
Sbjct: 209 IKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGL 268

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            + P +      Y++++  LCK+        +   M+ +GC    V   I+   +    +
Sbjct: 269 EIPPHA------YSLVIGGLCKEGKCVEGYAVFEKMIQKGCK---VNVAIYTALIDSNAK 319

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               G       A+ LF+R +  G            L P   T+  VV  +C+  R+  A
Sbjct: 320 CGNMGE------AMLLFERMKKEG------------LEPDVVTYGVVVNCMCKSGRLDEA 361

Query: 655 I 655
           +
Sbjct: 362 M 362


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 202/396 (51%), Gaps = 5/396 (1%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  + N+++K +   G + +A Q F EM   +  PD+ TY T++ G C    L+ AV LL
Sbjct: 254 NVCSHNILLKALLSAGRLKDACQHFDEM---SSPPDVVTYGTMVHGYCVRGELENAVKLL 310

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM   G       +  +I  LC  G++  A +++++M + G   + V + T+I G C K
Sbjct: 311 DEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSK 370

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G+L  A  L + M       + VT+  +INGL + G   +  RVL  M ++   V+   Y
Sbjct: 371 GDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTY 430

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI G  K G   +A ++  +M+ +   PN V Y+AL DGLC+ G    A E+L EM N
Sbjct: 431 TVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCN 490

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N +TY+SL+ G  + G   +A+ I  +M       +   Y+ LI  LC+ G+   
Sbjct: 491 KGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDR 550

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +ML +G KP +  Y+ +++G C +G VE   KL   M  LE   +P+V TYN L
Sbjct: 551 AHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWM--LEKNVRPNVVTYNSL 608

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +   C   N+  + ++   M  +   P+  T NI +
Sbjct: 609 MKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILI 644



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 211/411 (51%), Gaps = 30/411 (7%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           LDEA+ L  E+          + N+L+  L   G L  A +  D M      P+ VTY T
Sbjct: 240 LDEAIALFRELPDKNV----CSHNILLKALLSAGRLKDACQHFDEM---SSPPDVVTYGT 292

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           ++HG C++G L+ AV LLD M A     N   Y ++I  L   G+  D  RVL  M    
Sbjct: 293 MVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHG 352

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
             ++  +++T+ISG   +G    A +L+++M ++G   + V ++ALI+GLCR G+  EA+
Sbjct: 353 VALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEAD 412

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +L EM++ G   +  TY+ L+ G+ + G   +A  +  +M       N V Y+ L  GL
Sbjct: 413 RVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGL 472

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C+ G +R A  +  +M ++G + +V  Y+S+I+GLC  G++E+A+++  EM     ++  
Sbjct: 473 CKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRT-- 530

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           DV+TY  L++ LCK      + ++L  M+D+G  P + T N+ +                
Sbjct: 531 DVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGF------------- 577

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                       R  GG K++E ML+K + P   T+  ++++ C  K +++
Sbjct: 578 --------CMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKS 620



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 226/441 (51%), Gaps = 13/441 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EAI LF  + D+  C     S N +L  ++  G    A + ++       M+  P+ +
Sbjct: 240 LDEAIALFRELPDKNVC-----SHNILLKALLSAGRLKDACQHFDE------MSSPPDVV 288

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  ++   C  G ++NA++L  EM  +  E +   Y +++  LC + ++ +A+ +L++M
Sbjct: 289 TYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDM 348

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
            + G     V F  +I+G C  G+L  A +L + M  +G   + VT+  LI+GLC  G L
Sbjct: 349 TMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGEL 408

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  +L  MV      + VTY  +I+G  K G  V+  RV   M  R+   N   Y+ L
Sbjct: 409 KEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTAL 468

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
             GL K+G    A +L  +M  KG + N   Y++LI+GLC+ G  ++A  I+ EM   G 
Sbjct: 469 SDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGH 528

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             + +TY++L+    +SG+  +A  + ++M       +   Y+VL++G C  G++   + 
Sbjct: 529 RTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKK 588

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   ML +  +P+VV Y+S++   C   +++   +++  M   E    P+  TYNIL+  
Sbjct: 589 LLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQE--VAPNENTYNILIKG 646

Query: 554 LCKQSNISHSIDLLNSMMDRG 574
            CK  N+  ++     M+++G
Sbjct: 647 HCKARNMKEALYFHQEMIEKG 667



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/440 (29%), Positives = 214/440 (48%), Gaps = 8/440 (1%)

Query: 134 VEEAIRLFHTMVDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           +E A++L   M  +      TV  + SV+ ++  +G    AL     + +     +  + 
Sbjct: 303 LENAVKLLDEMAAKGLESNATV--YTSVIALLCNKGQVSDALRV---LEDMTMHGVALDA 357

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           + F  VI   C  G +  A +LF EM  R    D  T+  L++GLC+   L EA  +L E
Sbjct: 358 VVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQE 417

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   G     VT+ VLI+G CK G +  A ++ + M  +   PN VTY  L  GLC +G+
Sbjct: 418 MVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGD 477

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +  A  LL  M       N  TY ++INGL K G      R++  ME      + Y Y+T
Sbjct: 478 VRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTT 537

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI  L K G+ + A  + ++M++KG KP+   Y+ L++G C  G+ +  +++L  M+   
Sbjct: 538 LIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKN 597

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  TY+SLMK +          EI+K M       NE  Y++LI G C+   ++EA 
Sbjct: 598 VRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEAL 657

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
               +M+ +G +    +YS++I  L       EA   F++M      ++PDV+++   ++
Sbjct: 658 YFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSF--YMD 715

Query: 553 ALCKQSNISHSIDLLNSMMD 572
               + N+  +I L + +++
Sbjct: 716 ISFNEDNLESTITLCDELVE 735



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 200/407 (49%), Gaps = 34/407 (8%)

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
           P +F++L+  LC       +A+L+  +   G  P+  + N ++  L     LD+A++L  
Sbjct: 200 PASFDLLL--LCLP-----SAELLRRLRQYGLSPSPESCNAVLSRL----PLDEAIALF- 247

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           R +  K   N  ++  ++  L+  GR  D  +     +E     +   Y T++ G    G
Sbjct: 248 RELPDK---NVCSHNILLKALLSAGRLKDACQ---HFDEMSSPPDVVTYGTMVHGYCVRG 301

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + E+A+KL  +M  KG + N  VY+++I  LC  G+  +A  +L +M  +G A +A  ++
Sbjct: 302 ELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFT 361

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +++ GF   G    A  ++++M K     + V ++ LI+GLC  G+L+EA  V  +M+ +
Sbjct: 362 TVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDK 421

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G   DVV Y+ +I G C  G++ EA ++ NEM+    +  P+V TY  L + LCKQ ++ 
Sbjct: 422 GLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGR--RVAPNVVTYTALSDGLCKQGDVR 479

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL------------KEKLEAPQDGTDF--LNELA 607
            + +LL+ M ++G + ++ T N  +  L              ++EA    TD      L 
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             L K         +++ ML K + P  +T+  ++   C   R++  
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGG 586


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/468 (29%), Positives = 244/468 (52%), Gaps = 8/468 (1%)

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
           M + K  +   ++ F+ ++  KA ++ +A+ +F TM  E  C  ++ ++N ++N     G
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSE-SCVPSLVTYNVLINSRCNAG 59

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
            + +AL+ +  +   K +   P+  T+N +I  +C  G  + A +L  EM  +N   +++
Sbjct: 60  EFGKALDLFQSMKREKRVE--PDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVF 117

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           TY +++  L KE + +E+  +L+EM   GC P    FN ++ G  ++  + +A ++  +M
Sbjct: 118 TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 177

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV--ASKCMPNEVTYGTIINGLVKLG 346
              G  P+ V+Y+ LIHGL   G LD+++ +L  M   A+  +PN +T+ T+I+GL + G
Sbjct: 178 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
                  V  SM E     N+Y Y+TLI+GL +  K   A +L+++M +    P+ V Y+
Sbjct: 238 ELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYN 297

Query: 407 ALIDGLCRVGKPDEAEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           +LI G C+ G  DEAE++  EM    G      T+++L+ GF + GK  +A E+  +M  
Sbjct: 298 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 357

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                +   Y +LI GL    KL EA  V+ QM  +    D V+  S + GLC  G++++
Sbjct: 358 KGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQ 417

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           A  +F      +  + P+  T+ IL  +L K   +  +  L+     R
Sbjct: 418 AYAVFEAT--RKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/367 (34%), Positives = 195/367 (53%), Gaps = 6/367 (1%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D Y +  ++  L K   L +A+ + + M+ + C P+ VT+NVLIN  C  GE G+A  L 
Sbjct: 11  DAYDF--VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLF 68

Query: 286 DNMFL-KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
            +M   K   P+  TYNTLI GLC  GN + A  LL  M       N  TY +II  LVK
Sbjct: 69  QSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVK 128

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
             +  +  +VL  M     + + + ++ ++ G  +    E A ++++ M+E G KP+ V 
Sbjct: 129 EAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVS 188

Query: 405 YSALIDGLCRVGKPDEAEEILFEMI--NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           Y  LI GL ++GK DE+ +IL EM     G   N  T+S+L+ G   +G+  KA+E++  
Sbjct: 189 YHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGS 248

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +  C  N+  Y+ LI GLC   K+ +AR ++ +M      PD VAY+S+I G C  GS
Sbjct: 249 MLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGS 308

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           ++EA KL+ EM       QP + T+N L++  CK   +  + +L+  M  +G   D  T 
Sbjct: 309 MDEAEKLYREM-SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTY 367

Query: 583 NIFLTAL 589
            I +  L
Sbjct: 368 RILIAGL 374



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 225/463 (48%), Gaps = 47/463 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI    N+G+F     +   M+REKRV  ++                         
Sbjct: 47  TYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRW------------------------ 82

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                      ++N++++ +   G    A +  + +   +  NI  N  T++ +IK++ +
Sbjct: 83  -----------TYNTLISGLCSSGNTEGARKLLSEM---RDKNIAANVFTYSSIIKSLVK 128

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               + + ++  EM    C PD++ +  +M G  + N +++A  +   M   G  P  V+
Sbjct: 129 EAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVS 188

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLK--GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +++LI+GL K G+L  + K++  M ++  G +PN +T++TLIHGLC  G L+KA+ +   
Sbjct: 189 YHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGS 248

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+ + C PN+ TY T+I GL +  + +    +   M +     +   Y++LI+G  K G 
Sbjct: 249 MLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGS 308

Query: 383 AEDAMKLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
            ++A KL+++M    G +P  V ++ LIDG C++GK   A E++ EM   G AA+  TY 
Sbjct: 309 MDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYR 368

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            L+ G   + K  +A+E++K M +   + + V     + GLC+ G + +A  V+      
Sbjct: 369 ILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKS 428

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           G  P+   +  +   L   G VE+A KL      +EP    D+
Sbjct: 429 GAVPNPETFRILSESLIKLGRVEDAQKL------MEPAKARDI 465



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 135/268 (50%), Gaps = 1/268 (0%)

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M  +KC      Y  ++  L K G       V  +M+      +   Y+ LI+     G+
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 383 AEDAMKLWKQM-MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
              A+ L++ M  EK  +P+   Y+ LI GLC  G  + A ++L EM +   AAN FTYS
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           S++K   +  K  ++ ++ ++M    C  +   ++ ++ G      + +AR V+  M+  
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G KPD V+Y  +IHGL   G ++E+LK+ +EM        P+V T++ L++ LC+   + 
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            ++++  SM++ GC P+  T    +  L
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGL 268



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 147/310 (47%), Gaps = 9/310 (2%)

Query: 56  QGNAKSEQ-PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKR 114
           QG A+S     + E++    + G Y+  + +++ LI   A  G       +L  M     
Sbjct: 159 QGFARSNNMEKAREVYQHMVESG-YKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAA 217

Query: 115 VVLEKSFIFIFKAYG--KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHR 172
             +     F    +G  +   +E+A+ +F +M+ E  CK    ++ +++  + +     +
Sbjct: 218 GYVPNVITFSTLIHGLCRTGELEKALEVFGSML-EAGCKPNKYTYTTLIAGLCRAEKVIQ 276

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV-RNCEPDIYTYC 231
           A E +  +  A    I P+ + +N +I   C+ G +D A +L+REM      +P I T+ 
Sbjct: 277 ARELFEKMTQA---CIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFN 333

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           TL+DG CK  +L  A  L+ EM   G      T+ +LI GL +  +L  A ++   M  K
Sbjct: 334 TLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREK 393

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
             L + V+  + + GLC  GN+D+A ++ +    S  +PN  T+  +   L+KLGR  D 
Sbjct: 394 KFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 453

Query: 352 ARVLMSMEER 361
            +++   + R
Sbjct: 454 QKLMEPAKAR 463


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 143/530 (26%), Positives = 240/530 (45%), Gaps = 67/530 (12%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  ++ + +A+   +   +  F  ++      G    A++ F  M   +C P  + Y  
Sbjct: 125 AVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNA 184

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +   L     +  A+ L + M   GC P   T+ VL++GLCK G    A K+ D M  +G
Sbjct: 185 VFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERG 244

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +P+   Y  L+  LC +G ++ A  LL  M  + C P+EVTY   ++GL K GR  +  
Sbjct: 245 IVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAF 304

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
                +++  F +    YS LI GLF+ G+ ++ +  + +M+ K   P+  +Y+ LI   
Sbjct: 305 HRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRF 364

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
              G+  +A  +L EM + G   + F Y++L+K  F+ G   +A  +  +M +NN V + 
Sbjct: 365 AEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDS 424

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             ++++I GLC+ G + +A  V+ +M   GC P V+ Y+++I GL  AG +EEA  LF++
Sbjct: 425 TTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHK 484

Query: 533 M-------------------------------LC---------------LEPKSQPDVFT 546
           M                               +C               +E    PDV T
Sbjct: 485 MEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVT 544

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN L+N LCK  N+  ++ L   +  +G  PD +T    +  L  +     D T      
Sbjct: 545 YNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGL-WRAHRENDAT------ 597

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              LF+    SGGF            P    +  +++ LCR K++  AIN
Sbjct: 598 --MLFQNILRSGGF------------PSLPIYNTMMRSLCRMKKLSQAIN 633



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/484 (28%), Positives = 244/484 (50%), Gaps = 21/484 (4%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +  A+  A   +EA+  F  M D F C+ T   +N+V  V++  G+   AL  YN 
Sbjct: 146 AFRALVLAHSSAGRHQEAVEAFSRMGD-FDCRPTAFVYNAVFQVLVDRGVILLALALYNR 204

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V++     LPN+ T+ +++  +C+ G+  +A+++F EM  R   PD+  Y  L+  LC 
Sbjct: 205 MVSS---GCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCN 261

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E R+++A  LL  M+ +GC P  VT+ V ++GLCK G +  A    + +   G     + 
Sbjct: 262 EGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIG 321

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+ LI GL   G  D+ +S    M+     P+   Y  +I    + GR  D   +L  M+
Sbjct: 322 YSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMK 381

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           ++ F  + + Y+TL+  LF  G  + A  L  +M++     ++  ++ +I GLC+ G  D
Sbjct: 382 DKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLID 441

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN------------- 466
           +A ++  EM  +GC     TY++L+ G + +G   +A  ++  M                
Sbjct: 442 KAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGA 501

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
           N V +      L+ G+C+ G++ +A  +   ++  G  PDVV Y+++I+GLC A +++ A
Sbjct: 502 NQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGA 561

Query: 527 LKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           L+LF E   L+ K   PD  TY  L++ L +    + +  L  +++  G  P L   N  
Sbjct: 562 LRLFKE---LQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTM 618

Query: 586 LTAL 589
           + +L
Sbjct: 619 MRSL 622



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/504 (23%), Positives = 226/504 (44%), Gaps = 29/504 (5%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D   Y+ L+    N G  +    +L  M+       E ++        KA  V+EA   F
Sbjct: 248 DVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRF 307

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             + D       +  ++ +++ + Q G +   L +Y  ++     +I P+   + ++I+ 
Sbjct: 308 ELLQDGGFTLGLI-GYSCLIDGLFQAGRFDEGLSYYTEMLGK---SISPDITLYTILIRR 363

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
               G   +A  L  EM  +   PD + Y TL+  L     +D A  L+ EM  +     
Sbjct: 364 FAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLD 423

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             T N++I GLCK G + +A ++ D M   GC P  +TYN LI GL   G L++A  L  
Sbjct: 424 STTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFH 483

Query: 322 RM-------------VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           +M             + +  + +  +   +++G+ + G+ +   ++L  + E     +  
Sbjct: 484 KMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVV 543

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+TLI+GL K    + A++L+K++  KG  P+ + Y  LIDGL R  + ++A  +   +
Sbjct: 544 TYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNI 603

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK---NNCVYNEVCYSVLIHGLCED 485
           + +G   +   Y+++M+      K  +A+ +W D      N    +EV  +       ED
Sbjct: 604 LRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKYNLSPEDEVIANA--RKCFED 661

Query: 486 GKLREA--RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           G L E    ++    +     P+   Y+  + GLC    +++AL++F+ +        P 
Sbjct: 662 GFLDETVKELIKIDQVYGSLNPN--PYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPA 719

Query: 544 VFTYNILLNALCKQSNISHSIDLL 567
                +L+N LC   N++ ++D++
Sbjct: 720 CCA--LLINYLCWDRNLNAAVDIM 741


>gi|414587959|tpg|DAA38530.1| TPA: hypothetical protein ZEAMMB73_367044 [Zea mays]
          Length = 537

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/377 (32%), Positives = 201/377 (53%), Gaps = 6/377 (1%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   + P+  ++N+V+ T+ R     +A+ L+R M   +  P  +T+  +   LC+  R 
Sbjct: 3   RRFAVAPSFRSYNIVLSTLARADCHADALLLYRRMLRDHVPPTTFTFGVVARALCRLGRA 62

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +A+  L  M   GC P  V + ++I+ L   G +  A  L+D M L GC  +  T+N L
Sbjct: 63  GDALARLRGMARHGCVPDAVLYQIVIHALVVQGRVAEATMLLDEMLLMGCAADVNTFNDL 122

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +  LC    + +A  L+DRM+   CMP+ +TYG ++ GL +  +A +   +L  + E   
Sbjct: 123 VLRLCGLRRVREAARLVDRMMTQGCMPSAMTYGFLLQGLCRTRQADEACTLLGRLPE--- 179

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            VN  + +T+I G   EGK     KL++ M  KGC  +   YS L+ GLC++G+      
Sbjct: 180 -VNVVMLNTVICGCLMEGKLARVTKLYEMMGSKGCPSDVHTYSILMHGLCKLGRFGSGVR 238

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L +M  N CA N  TYS+L+  F  +G    A  +   M       N   Y+ +I+ LC
Sbjct: 239 MLDKMEENSCAPNIMTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALC 298

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           +DGKL +A  +  +M S+GCKPD+  Y+ +I  LC  G+V+ ++ L  EM  +    +P+
Sbjct: 299 KDGKLDQATRLVQEMKSQGCKPDICTYNGLIKALCKEGNVDWSMALLEEM--VTKGIKPN 356

Query: 544 VFTYNILLNALCKQSNI 560
            F+YN+L+N LCK  N+
Sbjct: 357 NFSYNMLINELCKAGNV 373



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 200/389 (51%), Gaps = 8/389 (2%)

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M   F    + +S+N VL+ + +   +  AL  Y  ++     ++ P T TF +V + +C
Sbjct: 1   MPRRFAVAPSFRSYNIVLSTLARADCHADALLLYRRMLRD---HVPPTTFTFGVVARALC 57

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           RLG   +A+   R M    C PD   Y  ++  L  + R+ EA +LLDEM + GC     
Sbjct: 58  RLGRAGDALARLRGMARHGCVPDAVLYQIVIHALVVQGRVAEATMLLDEMLLMGCAADVN 117

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           TFN L+  LC    +  AA+LVD M  +GC+P+ +TY  L+ GLC     D+A +LL R+
Sbjct: 118 TFNDLVLRLCGLRRVREAARLVDRMMTQGCMPSAMTYGFLLQGLCRTRQADEACTLLGRL 177

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                  N V   T+I G +  G+     ++   M  +    + + YS L+ GL K G+ 
Sbjct: 178 PEV----NVVMLNTVICGCLMEGKLARVTKLYEMMGSKGCPSDVHTYSILMHGLCKLGRF 233

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
              +++  +M E  C PN + YS L+   CR G  D+A  +L +M+  G + N+  Y+ +
Sbjct: 234 GSGVRMLDKMEENSCAPNIMTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 293

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +    + GK  +A  + ++M    C  +   Y+ LI  LC++G +  +  +  +M+++G 
Sbjct: 294 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNGLIKALCKEGNVDWSMALLEEMVTKGI 353

Query: 504 KPDVVAYSSMIHGLCNAGSV-EEALKLFN 531
           KP+  +Y+ +I+ LC AG+V  E   LFN
Sbjct: 354 KPNNFSYNMLINELCKAGNVIIECSGLFN 382



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 121/379 (31%), Positives = 194/379 (51%), Gaps = 19/379 (5%)

Query: 218 MPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           MP R    P   +Y  ++  L + +   +A+LL   M  D   PT  TF V+   LC+ G
Sbjct: 1   MPRRFAVAPSFRSYNIVLSTLARADCHADALLLYRRMLRDHVPPTTFTFGVVARALCRLG 60

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
             G A   +  M   GC+P+ V Y  +IH L ++G + +A  LLD M+   C  +  T+ 
Sbjct: 61  RAGDALARLRGMARHGCVPDAVLYQIVIHALVVQGRVAEATMLLDEMLLMGCAADVNTFN 120

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++  L  L R  + AR++  M  +    +   Y  L+ GL +  +A++A  L  ++ E 
Sbjct: 121 DLVLRLCGLRRVREAARLVDRMMTQGCMPSAMTYGFLLQGLCRTRQADEACTLLGRLPEV 180

Query: 397 GC-KPNTVVYSALIDG-LCRVGKPDEAEEILFEMINN-GCAANAFTYSSLMKGFFESGKG 453
                NTV+   L++G L RV K       L+EM+ + GC ++  TYS LM G  + G+ 
Sbjct: 181 NVVMLNTVICGCLMEGKLARVTK-------LYEMMGSKGCPSDVHTYSILMHGLCKLGRF 233

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
              V +   M +N+C  N + YS L+H  C +G   +AR +  QML++G   +   Y+ +
Sbjct: 234 GSGVRMLDKMEENSCAPNIMTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 293

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSM 570
           I+ LC  G +++A +L  EM     KSQ   PD+ TYN L+ ALCK+ N+  S+ LL  M
Sbjct: 294 IYALCKDGKLDQATRLVQEM-----KSQGCKPDICTYNGLIKALCKEGNVDWSMALLEEM 348

Query: 571 MDRGCDPDLVTCNIFLTAL 589
           + +G  P+  + N+ +  L
Sbjct: 349 VTKGIKPNNFSYNMLINEL 367



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 131/266 (49%), Gaps = 8/266 (3%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +TF  L+         +    ++ RM  +  +    ++ F+ +   +    +EA  L   
Sbjct: 117 NTFNDLVLRLCGLRRVREAARLVDRMMTQGCMPSAMTYGFLLQGLCRTRQADEACTLLGR 176

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           + +       V   N+V+   + EG   R  + Y  ++ +K      +  T+++++  +C
Sbjct: 177 LPEV-----NVVMLNTVICGCLMEGKLARVTKLY-EMMGSK--GCPSDVHTYSILMHGLC 228

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +LG   + +++  +M   +C P+I TY TL+   C+    D+A  +LD+M   G      
Sbjct: 229 KLGRFGSGVRMLDKMEENSCAPNIMTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 288

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N +I  LCK+G+L +A +LV  M  +GC P+  TYN LI  LC +GN+D +++LL+ M
Sbjct: 289 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNGLIKALCKEGNVDWSMALLEEM 348

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAV 349
           V     PN  +Y  +IN L K G  +
Sbjct: 349 VTKGIKPNNFSYNMLINELCKAGNVI 374



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 88/210 (41%), Gaps = 12/210 (5%)

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ +++ M +++       + V+   LC  G+  +A      M   GC PD V Y  +IH
Sbjct: 30  ALLLYRRMLRDHVPPTTFTFGVVARALCRLGRAGDALARLRGMARHGCVPDAVLYQIVIH 89

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            L   G V EA  L +EML +      DV T+N L+  LC    +  +  L++ MM +GC
Sbjct: 90  ALVVQGRVAEATMLLDEMLLM--GCAADVNTFNDLVLRLCGLRRVREAARLVDRMMTQGC 147

Query: 576 DPDLVTCNIFLTALKEKLEA----------PQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
            P  +T    L  L    +A          P+     LN +        + +   K+ E+
Sbjct: 148 MPSAMTYGFLLQGLCRTRQADEACTLLGRLPEVNVVMLNTVICGCLMEGKLARVTKLYEM 207

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           M  K       T+  ++  LC+  R  + +
Sbjct: 208 MGSKGCPSDVHTYSILMHGLCKLGRFGSGV 237


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 157/559 (28%), Positives = 268/559 (47%), Gaps = 40/559 (7%)

Query: 23  KTLSLTTIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLG 82
           + L  +  P+  S+ + ++   + S KQ          +E+   +   N +P        
Sbjct: 178 RLLVASMPPAPNSYAYNTLLKGLCSAKQW-------GDAEELVEEMTRNDSPP------D 224

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           D TF  LI  +  SG       +L RM +       ++    I  F   G+   V+EA+ 
Sbjct: 225 DLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGR---VKEALH 281

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           LF  M     CK  + S+N+VL  + +   +  A E    +V     +  P+ +TFN VI
Sbjct: 282 LFSCM----PCKPDIFSYNAVLKGLCRAERWEDAGELITEMV---RKDCSPDEVTFNTVI 334

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C  GLVD A+++  +MP    +PD +TY  L++   ++  +++A+ LL  M    C 
Sbjct: 335 SFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELLRSMP---CS 391

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  V +  ++ GLC++G+     +L+  M    C P+E+ +  +I  LC +G +D  + +
Sbjct: 392 PNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEV 451

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  +    C P+ V Y +++NG  + GR  D  ++  SM  +    N   Y+ ++ GL K
Sbjct: 452 LQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMTCKP---NTVTYNYVLMGLCK 508

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
               EDA KL  +M+ + C PN + +S LI  LC+ G  + A ++  +M   GC  N   
Sbjct: 509 VELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTPNVII 568

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YS+L  G  E G    A+++  +M+   C  + +CYS  + GLC      +A  +  +M 
Sbjct: 569 YSTLNNGLSEKGCVDNALKLLNNMS---CKADTICYSSALKGLCRAELWEDAGELIVEMF 625

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            + C PD V +S +I  LC  G VE A ++ + ML  E    P++  Y+ L+N   +  +
Sbjct: 626 RKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYE--CTPNIVIYSSLINGFSEHGH 683

Query: 560 ISHSIDLLNSMMDRGCDPD 578
           +  ++ LL SM    C+PD
Sbjct: 684 LEDALKLLRSM---PCEPD 699



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 152/543 (27%), Positives = 254/543 (46%), Gaps = 58/543 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF---KAYGKAH-LVEEAIRL 140
           T+ +LI  Y   G  +   +++  M          + +      K +G A  LVEE  R 
Sbjct: 160 TYNTLIAGYCRGGRLEDARLLVASMPPAPNSYAYNTLLKGLCSAKQWGDAEELVEEMTR- 218

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
             +  D+        +F  +++   Q GL  RA+   + +         P  + +N +I 
Sbjct: 219 NDSPPDDL-------TFGMLIHSFCQSGLVDRAMGILDRM---SKCGCTPGAIVYNEIIS 268

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
               LG V  A+ LF  MP   C+PDI++Y  ++ GLC+  R ++A  L+ EM    C P
Sbjct: 269 CFAELGRVKEALHLFSCMP---CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSP 325

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKG---------------------------- 292
             VTFN +I+ LC  G +  A ++VD M   G                            
Sbjct: 326 DEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALELL 385

Query: 293 ----CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
               C PN V Y +++ GLC  G  +    L+  MV + C P+E+ +G II+ L + G  
Sbjct: 386 RSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLV 445

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
             G  VL  +       +  +Y++L++G  + G+ +D++KL+K M    CKPNTV Y+ +
Sbjct: 446 DCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMT---CKPNTVTYNYV 502

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           + GLC+V   ++A +++ EM+   C  N  T+S L+    + G    A+++++ M    C
Sbjct: 503 LMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGC 562

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N + YS L +GL E G +  A  +   M    CK D + YSS + GLC A   E+A +
Sbjct: 563 TPNVIIYSTLNNGLSEKGCVDNALKLLNNM---SCKADTICYSSALKGLCRAELWEDAGE 619

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L  EM        PD  T++I++  LC+Q  + ++ ++ + M+   C P++V  +  +  
Sbjct: 620 LIVEMF--RKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLING 677

Query: 589 LKE 591
             E
Sbjct: 678 FSE 680



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 225/463 (48%), Gaps = 59/463 (12%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + +  N ++   CR G + +A ++ R +       D+ TY TL+ G C+  RL++A LL+
Sbjct: 123 DAVDHNTLVAGYCRAGRLADAERMLRSLAASG-AADVVTYNTLIAGYCRGGRLEDARLLV 181

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             M      P    +N L+ GLC   + G A +LV+ M      P+++T+  LIH  C  
Sbjct: 182 ASMPP---APNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQS 238

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D+A+ +LDRM    C P  + Y  II+   +LGR  +   +   M  +    + + Y
Sbjct: 239 GLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMPCKP---DIFSY 295

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + ++ GL +  + EDA +L  +M+ K C P+ V ++ +I  LC  G  D A E++ +M  
Sbjct: 296 NAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPK 355

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   + FTYS+L+  F E G    A+E+ + M    C  N VCY  ++ GLC DG+  +
Sbjct: 356 YGRKPDNFTYSALINAFSEQGCVEDALELLRSMP---CSPNTVCYKSVLKGLCRDGQWED 412

Query: 491 ARMVWTQML-----------------------------------SRGCKPDVVAYSSMIH 515
              +  +M+                                   + GC PDVV Y+S+++
Sbjct: 413 VGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLN 472

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G    G V+++LKLF  M C     +P+  TYN +L  LCK      +  L++ M+ + C
Sbjct: 473 GFAEYGRVDDSLKLFKSMTC-----KPNTVTYNYVLMGLCKVELWEDAGKLIDEMVGQEC 527

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            P+ +T +I +++L +K          L E AI +F++ +  G
Sbjct: 528 PPNEMTFSILISSLCQK---------GLVECAIDVFEKMQMYG 561



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 168/340 (49%), Gaps = 23/340 (6%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           LD A+ L+  M      P  V   +LI  LC  G L  A    + +       + V +NT
Sbjct: 77  LDAALQLVGSMSEP---PAVVPCTLLIKKLCAAGRLADA----EGVLRASEAADAVDHNT 129

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           L+ G C  G L  A  +L R +A+    + VTY T+I G  + GR  D   ++ SM    
Sbjct: 130 LVAGYCRAGRLADAERML-RSLAASGAADVVTYNTLIAGYCRGGRLEDARLLVASMPPAP 188

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              N Y Y+TL+ GL    +  DA +L ++M      P+ + +  LI   C+ G  D A 
Sbjct: 189 ---NSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAM 245

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            IL  M   GC   A  Y+ ++  F E G+  +A+ ++  M    C  +   Y+ ++ GL
Sbjct: 246 GILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLFSCMP---CKPDIFSYNAVLKGL 302

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK--S 540
           C   +  +A  + T+M+ + C PD V ++++I  LC+ G V+ AL++ ++M    PK   
Sbjct: 303 CRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQM----PKYGR 358

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           +PD FTY+ L+NA  +Q  +  +++LL SM    C P+ V
Sbjct: 359 KPDNFTYSALINAFSEQGCVEDALELLRSM---PCSPNTV 395



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 159/370 (42%), Gaps = 58/370 (15%)

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           R V  +  P        ++  ++LG      +++ SM E    V     + LI  L   G
Sbjct: 51  RWVNPRVPPRRGAANDRLHHFIRLGDLDAALQLVGSMSEPPAVVP---CTLLIKKLCAAG 107

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC-------- 433
           +  DA    + ++      + V ++ L+ G CR G+  +AE +L  +  +G         
Sbjct: 108 RLADA----EGVLRASEAADAVDHNTLVAGYCRAGRLADAERMLRSLAASGAADVVTYNT 163

Query: 434 -----------------------AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
                                  A N++ Y++L+KG   + +   A E+ ++M +N+   
Sbjct: 164 LIAGYCRGGRLEDARLLVASMPPAPNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPP 223

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +++ + +LIH  C+ G +  A  +  +M   GC P  + Y+ +I      G V+EAL LF
Sbjct: 224 DDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEALHLF 283

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--- 587
           + M C     +PD+F+YN +L  LC+      + +L+  M+ + C PD VT N  ++   
Sbjct: 284 SCMPC-----KPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLC 338

Query: 588 -------ALKEKLEAPQDG---TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
                  AL+   + P+ G    +F     I  F  Q        +E++     SP T  
Sbjct: 339 HKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVE--DALELLRSMPCSPNTVC 396

Query: 638 WERVVQELCR 647
           ++ V++ LCR
Sbjct: 397 YKSVLKGLCR 406


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 250/519 (48%), Gaps = 19/519 (3%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C   V  +++V++ + +EG    A + ++ +       + PN +T+N VI  +C+   VD
Sbjct: 207 CPCNVVVYSTVVHGLFKEGKVGEACDLFHEMT---QQGVPPNVVTYNSVIHALCKARAVD 263

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
            A  + R+M     +PD  TY TL+ G     +  +AV +  EM   G  P  VT +  +
Sbjct: 264 KAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFV 323

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
             LCK+G +  A +  D+M  KG   N ++Y+TL+HG    G L    +L + MV    +
Sbjct: 324 AFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIV 383

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PN+  +  ++NG  K G   +   +   M++R  + +   Y  +I    + G  +DAM  
Sbjct: 384 PNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDK 443

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +  M++KG +PN  VY  LI G C  G   +AEE+++E+ N G      +++SL+    +
Sbjct: 444 FNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCK 503

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G+  +A  I+  + +     +   ++ LI G C  GK+ EA  V   M+S G +PD+V 
Sbjct: 504 EGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVT 563

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y ++++G C  G +++ L LF E+  L    +P  FTY I+L+ L      + + ++   
Sbjct: 564 YGTLVNGCCKNGRIDDGLILFREL--LHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQE 621

Query: 570 MMDRGCDPDLVTCNIFLTAL------------KEKLEAPQDGTD--FLNELAIRLFKRQR 615
           M++ G    + T +I LT L             +KL A     D   LN +  ++FK +R
Sbjct: 622 MIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARR 681

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                 +   +    L P   T+  +++ L +   ++ A
Sbjct: 682 REEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEA 720



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 240/488 (49%), Gaps = 27/488 (5%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV- 247
           LP   T++++I   CR   +D A   F  +  +  + D+    +L+ GLC   R DEAV 
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK---GCLPNEVTYNTLI 304
           +L   M   GC P  ++++ ++  +C +G    A  ++  M +K   GC  N V Y+T++
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDIL-RMAVKQGGGCPCNVVVYSTVV 218

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEERKF 363
           HGL  +G + +A  L   M      PN VTY ++I+ L K  RAVD A+ +L  M     
Sbjct: 219 HGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCK-ARAVDKAQGILRQMVGNGV 277

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TLI G    G+ + A++++K+M  +G  PNTV  S  +  LC+ G+ +EA E
Sbjct: 278 QPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEARE 337

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
               M+  G   N  +YS+L+ G+  +G       ++  M ++  V N+  +++L++G  
Sbjct: 338 FFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYA 397

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G +REA  ++  M  RG  PDV+ Y ++IH  C  GS+++A+  FN M  ++   +P+
Sbjct: 398 KCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHM--IDKGVEPN 455

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
              Y  L+   C   ++  + +L+  + ++G  P +++    +  L ++    +    F 
Sbjct: 456 FAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIF- 514

Query: 604 NELAIRLFKRQ----------------RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            ++ IR  ++                 + S  F++ + M+   + P   T+  +V   C+
Sbjct: 515 -DMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK 573

Query: 648 PKRIQAAI 655
             RI   +
Sbjct: 574 NGRIDDGL 581



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 242/526 (46%), Gaps = 72/526 (13%)

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR---NCEP 225
           L+HR  E          +  +P+ ++++ V+K+VC  G    A+ + R M V+    C  
Sbjct: 161 LFHRMPE----------LGCVPDAISYSTVLKSVCDDGRSQWALDILR-MAVKQGGGCPC 209

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           ++  Y T++ GL KE ++ EA  L  EM   G  P  VT+N +I+ LCK   + +A  ++
Sbjct: 210 NVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGIL 269

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT----------- 334
             M   G  P+ VTYNTLIHG    G   +AV +   M +   +PN VT           
Sbjct: 270 RQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKH 329

Query: 335 ------------------------YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
                                   Y T+++G    G  VD + +   M       N++++
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + L++G  K G   +AM +++ M ++G  P+ + Y A+I   CR+G  D+A +    MI+
Sbjct: 390 NILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMID 449

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N   Y  L++GF   G   KA E+  ++         + ++ LI+ LC++G++ E
Sbjct: 450 KGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFE 509

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A+ ++  ++  G K DV  ++S+I G C  G + EA ++ + M+ +    +PD+ TY  L
Sbjct: 510 AQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSV--GIEPDIVTYGTL 567

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +N  CK   I   + L   ++ +G  P   T  I L           DG          L
Sbjct: 568 VNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIIL-----------DG----------L 606

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           F   RT+   ++ + M++  ++    T+  ++  LCR    + AI 
Sbjct: 607 FHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAIT 652



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 237/484 (48%), Gaps = 12/484 (2%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV---VLEKSFIFIFKAYGKAHLVEE 136
           Q  + T+ +LI  Y+  G +K    +   M     +   V   +F+     +G+   +EE
Sbjct: 278 QPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGR---IEE 334

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A   F +M+ + H K  + S++++L+     G        +N +V      I+PN   FN
Sbjct: 335 AREFFDSMLAKGH-KLNIISYSTLLHGYATAGCLVDMSNLFNLMVRD---GIVPNQHVFN 390

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           +++    + G+V  A+ +F +M  R   PD+ TY  ++   C+   +D+A+   + M   
Sbjct: 391 ILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK 450

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P    +  LI G C +G+L +A +LV  +  KG  P  +++ +LI+ LC +G + +A
Sbjct: 451 GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEA 510

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             + D ++ +    +   + ++I+G   +G+  +  RV  +M       +   Y TL++G
Sbjct: 511 QRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNG 570

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K G+ +D + L+++++ KG KP T  Y  ++DGL   G+   A+E+  EMI +G A  
Sbjct: 571 CCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVT 630

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TYS L+ G   +    +A+ +++ +   N  ++ V  +++I  + +  +  EA  ++ 
Sbjct: 631 IPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFA 690

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            +   G  P V  Y+ M+  L   GSVEEA  +F+ M  L+    P     N+++  L +
Sbjct: 691 SIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVM--LKSGLSPTSHFINVIVRTLLE 748

Query: 557 QSNI 560
           +  I
Sbjct: 749 KGEI 752



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 200/424 (47%), Gaps = 5/424 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           E F+S    G ++L   ++ +L+  YA +G    +  +   M R+  V  +  F  +   
Sbjct: 337 EFFDSMLAKG-HKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNG 395

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y K  +V EA+ +F  M  +      V ++ +V++   + G    A++ +NH+++     
Sbjct: 396 YAKCGMVREAMFIFEDM-QKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDK---G 451

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           + PN   +  +I+  C  G +  A +L  E+  +   P I ++ +L++ LCKE R+ EA 
Sbjct: 452 VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQ 511

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            + D +   G       F  LI+G C  G++  A ++ D M   G  P+ VTY TL++G 
Sbjct: 512 RIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGC 571

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G +D  + L   ++     P   TYG I++GL   GR      +   M E    V  
Sbjct: 572 CKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTI 631

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             YS L++GL +    E+A+ +++++     K + V+ + +I  + +  + +EAE +   
Sbjct: 632 PTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFAS 691

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           + + G      TY+ +M+   + G   +A  ++  M K+         +V++  L E G+
Sbjct: 692 IPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGE 751

Query: 488 LREA 491
           + +A
Sbjct: 752 IVKA 755



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 161/367 (43%), Gaps = 26/367 (7%)

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           LP   TY+ LI   C    LD A +    ++      + +   +++ GL    R  +   
Sbjct: 100 LPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVD 159

Query: 354 VLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG--CKPNTVVYSALID 410
           VL   M E     +   YST++  +  +G+++ A+ + +  +++G  C  N VVYS ++ 
Sbjct: 160 VLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVH 219

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GL + GK  EA ++  EM   G   N  TY+S++    ++    KA  I + M  N    
Sbjct: 220 GLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQP 279

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           + V Y+ LIHG    G+ ++A  ++ +M SRG  P+ V  S+ +  LC  G +EEA + F
Sbjct: 280 DNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFF 339

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           + ML    K   ++ +Y+ LL+       +    +L N M+  G  P+    NI +    
Sbjct: 340 DSMLAKGHKL--NIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYA 397

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                                K         I E M ++ L+P   T+  V+   CR   
Sbjct: 398 ---------------------KCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGS 436

Query: 651 IQAAINK 657
           +  A++K
Sbjct: 437 MDDAMDK 443



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 20/287 (6%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + SF S++N + +EG    A   ++ I+         +   F  +I   C +G +  A +
Sbjct: 491 ILSFASLINHLCKEGRVFEAQRIFDMIIRTGEK---ADVNIFTSLIDGYCLIGKMSEAFR 547

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +   M     EPDI TY TL++G CK  R+D+ ++L  E+   G  PT  T+ ++++GL 
Sbjct: 548 VHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLF 607

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G    A ++   M   G      TY+ L+ GLC     ++A+++  ++ A     + V
Sbjct: 608 HAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIV 667

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
               +I+ + K  R  +   +  S+ +         Y+ ++  L KEG  E+A  ++  M
Sbjct: 668 ILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVM 727

Query: 394 MEKGCKP-----NTVVYSALIDG--------LCRVGKPDEAEEILFE 427
           ++ G  P     N +V + L  G        +CRV    + + ILFE
Sbjct: 728 LKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRV----DGKSILFE 770



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 74/341 (21%), Positives = 137/341 (40%), Gaps = 39/341 (11%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           + +  LIQ +   GD    E ++Y +R +       SF  +     K   V EA R+F  
Sbjct: 457 AVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDM 516

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           ++     K  V  F S+++     G    A   ++ +V+   + I P+ +T+  ++   C
Sbjct: 517 IIRTGE-KADVNIFTSLIDGYCLIGKMSEAFRVHDAMVS---VGIEPDIVTYGTLVNGCC 572

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G +D+ + LFRE+  +  +P  +TY  ++DGL    R   A  +  EM   G   T  
Sbjct: 573 KNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIP 632

Query: 264 TFNVLINGLCKNGELGRAAK-------------------LVDNMFLK------------- 291
           T+++L+ GLC+N     A                     ++  MF               
Sbjct: 633 TYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASI 692

Query: 292 ---GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              G +P   TY  ++  L  +G++++A  +   M+ S   P       I+  L++ G  
Sbjct: 693 PDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEI 752

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           V     +  ++ +         S L+S    +GK  + + L
Sbjct: 753 VKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNL 793



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 62/135 (45%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           MN+  + +  N++I  + +    + A  LF  +P     P + TY  +M+ L KE  ++E
Sbjct: 660 MNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEE 719

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  +   M   G  PT    NV++  L + GE+ +A   +  +  K  L    T + L+ 
Sbjct: 720 AEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLS 779

Query: 306 GLCLKGNLDKAVSLL 320
               KG   + ++LL
Sbjct: 780 LFSCKGKHREHLNLL 794


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 221/418 (52%), Gaps = 5/418 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP+  T+N +I   C+   +  A+ LF  M     +P I TY +L+ G CK+  +DEAV 
Sbjct: 398 LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVK 457

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L  EM ++G  P  VT+  L+ G     +   A  L+D M   G   N+ TYN LI+G+C
Sbjct: 458 LYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGIC 517

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           +   + +   +L   ++   +P  +TY +IING VK G       V   M E+    N  
Sbjct: 518 MVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNII 577

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y++ I G  + G ++ A+K+   +  +G +P+ V Y+ALI+G C+ G    A ++L  +
Sbjct: 578 TYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVIL 637

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           + +G A N   Y+SL+ G+       +  + ++ M K   V +   Y+ LI G  +DG +
Sbjct: 638 LKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNV 697

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  ++++M+++G  PD   ++++ HGLC +G ++ A KL  EM  L+ +  P+VF YN
Sbjct: 698 AFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVR--PNVFIYN 755

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           +L+N   +   +  +  L + M++ G  PD  T +I ++  K+ LEA  +  D LN +
Sbjct: 756 MLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVS--KKFLEA-DNCADVLNPI 810



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 218/418 (52%), Gaps = 7/418 (1%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++A+ LF  M D       V ++N++++   Q      AL  ++ +   K   + P+  T
Sbjct: 384 KDAVCLFEEMADS--GLPDVFTYNNLIHWHCQAHKLREALNLFDRM---KKAGVKPSINT 438

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N ++   C+ G +D A++L+ EMP+   +P++ TY TLM G   +   D A  LLDEM+
Sbjct: 439 YNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK 498

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +G      T+NVLING+C    +     ++ +   +G +P  +TYN++I+G    G + 
Sbjct: 499 QNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMG 558

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A ++  +M      PN +TY + I+G  + G +    ++L  +  R    +   Y+ LI
Sbjct: 559 SAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALI 618

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +G  +EG    A++L   +++ G  PNTVVY++LI G   +    E  +    MI  G  
Sbjct: 619 NGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIV 678

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
           A+  TY++L+ GF + G    A+E++ +M     + +   ++ L HGLC  G +  A+ +
Sbjct: 679 ADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKL 738

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
             +M     +P+V  Y+ +I+G      ++EA +L +EML +    QPD  TY+IL++
Sbjct: 739 LEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNM--GIQPDDTTYDILVS 794



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 220/469 (46%), Gaps = 41/469 (8%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F+++++  ++EG++  A+  ++ +  A+   I P+   + L I  +C+LG    A+++ R
Sbjct: 195 FDALMSACLKEGMHEDAVRLFDEMPGAE---IDPDQRVYALAITALCKLGDGGRALRMLR 251

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM     +   +TY T++D L K  R++EA+ + DEM+  G     +    L+ G C   
Sbjct: 252 EMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQ 311

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           E+G A  L       G +P +V Y  LI G    G   KA  L  +M     +P+     
Sbjct: 312 EVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELS 371

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++ GL+   R  D   +   M +     + + Y+ LI    +  K  +A+ L+ +M + 
Sbjct: 372 LVLKGLLNDRRWKDAVCLFEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKA 430

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G KP+   Y++L+ G C+ G  DEA ++  EM   G   N  TY +LM+G+        A
Sbjct: 431 GVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNA 490

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCE-------DGKLR-------------------- 489
             +  +M +N    N+  Y+VLI+G+C        DG L+                    
Sbjct: 491 YALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIING 550

Query: 490 --------EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
                    A  V+ QM  +G  P+++ Y+S I G C  G  + ALK+ N++       Q
Sbjct: 551 FVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDV--RRRGLQ 608

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           PD+  YN L+N  C++ N+SH++ LL  ++  G  P+ V  N  +T  K
Sbjct: 609 PDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYK 657



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 159/378 (42%), Gaps = 52/378 (13%)

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MVA   +P+  +   ++    +   A D   + M M  R + V+ +++  L+S   KEG 
Sbjct: 148 MVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGM 207

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY-- 440
            EDA++L+ +M      P+  VY+  I  LC++G    A  +L EM   G     FTY  
Sbjct: 208 HEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRT 267

Query: 441 ---------------------------------SSLMKGFFESGKGHKAVEIWKDMAKNN 467
                                            ++LM+G+    +   A+ ++K+  K+ 
Sbjct: 268 MVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDG 327

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            V  +V Y VLI G  + G  ++A  +  QM  +G  P     S ++ GL N    ++A+
Sbjct: 328 IVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAV 387

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            LF EM        PDVFTYN L++  C+   +  +++L + M   G  P + T N  L 
Sbjct: 388 CLFEEM---ADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLM 444

Query: 588 ----------ALKEKLEAPQDGTDFLNELAIRLFK----RQRTSGGFKIVEVMLQKFLSP 633
                     A+K   E P +G        I L +    ++     + +++ M Q  +S 
Sbjct: 445 GYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSC 504

Query: 634 QTSTWERVVQELCRPKRI 651
              T+  ++  +C   R+
Sbjct: 505 NDYTYNVLINGICMVDRV 522


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 150/572 (26%), Positives = 266/572 (46%), Gaps = 32/572 (5%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
           F  +E  L  M+ ++ +   ++   +  AY    LV++A+ ++H +V   +   +  + N
Sbjct: 114 FPEIEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACN 173

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHM-NILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           S+LN++++      A + Y+ +++  +  +I  +  T ++++K +C  G +++ I+L   
Sbjct: 174 SLLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIES 233

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
              + C P+I  Y TL+DG CK+  ++ A  L  ++++ G  PT  TF  L+NG CK G 
Sbjct: 234 RWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGM 293

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
                 L+  M  +G   N   YN +I      G   KA   L  M  + C P+ VTY T
Sbjct: 294 FEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNT 353

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +IN     G   +  ++L     R    N+  Y+ L+ G  K+G+   A     +M   G
Sbjct: 354 LINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSG 413

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            + + + Y ALI GL   G+ D A  I   M+N G   +A  Y+ LM G F+ GK   A 
Sbjct: 414 LEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAK 473

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            +  +M   N   +   Y+ L+ G    G L EA+ ++  ++ +G  P VV Y+ MI G 
Sbjct: 474 VMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGF 533

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
             +G ++ A+   ++M        PD+FT++ +++   KQ N++  + +   M+ + C P
Sbjct: 534 SKSGMMDNAILCIDKM--RRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKP 591

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           ++VT    +     K E          ++A +LF   R+ G            L P   T
Sbjct: 592 NVVTYTSLINGYCRKGET---------KMAEKLFSMMRSHG------------LKPSVVT 630

Query: 638 WERVVQELCRPKRIQAA--------INKCWSN 661
           +  ++   C+  ++  A        INKC  N
Sbjct: 631 YSILIGSFCKEAKLGKAVSYFELMLINKCTPN 662



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 219/431 (50%), Gaps = 6/431 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y K   VE A +LF  +  +     T+++F S++N   + G++  A++    ++  
Sbjct: 249 LIDGYCKKGEVESAYKLFKKLKMKGFIP-TLQTFGSLVNGFCKMGMFE-AIDLL--LLEM 304

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   +  N   +N +I    +LG    A    +EM    CEPD+ TY TL++  C    +
Sbjct: 305 KDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEV 364

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA  LL++    G  P  +T+  L++G CK GE  +A   +  M   G   + ++Y  L
Sbjct: 365 EEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGAL 424

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           IHGL + G +D A+++ DRM+    +P+   Y  ++NGL K G+      +L  M ++  
Sbjct: 425 IHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNI 484

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             + ++Y+TL+ G  + G  ++A KL++ ++EKG  P  V Y+ +I G  + G  D A  
Sbjct: 485 APDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAIL 544

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
            + +M       + FT+S+++ G+ +    +  ++I+  M K NC  N V Y+ LI+G C
Sbjct: 545 CIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYC 604

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
             G+ + A  +++ M S G KP VV YS +I   C    + +A+  F  ML    K  P+
Sbjct: 605 RKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLI--NKCTPN 662

Query: 544 VFTYNILLNAL 554
              ++ L+N  
Sbjct: 663 DAAFHYLVNGF 673



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 150/602 (24%), Positives = 265/602 (44%), Gaps = 83/602 (13%)

Query: 85  TFY-SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
            FY +LI  Y   G+ +S   +  +++ +  +   ++F  +   + K  + E AI L   
Sbjct: 244 VFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFE-AIDLLLL 302

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN---ILPNTLTFNLVIK 200
            + +      V+ +N++++   + G   +A +        K M+     P+ +T+N +I 
Sbjct: 303 EMKDRGLSVNVQMYNNIIDARYKLGFDIKAKD------TLKEMSENCCEPDLVTYNTLIN 356

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C  G V+ A +L  +   R   P+  TY  L+ G CK+    +A   L EM   G   
Sbjct: 357 HFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEV 416

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             +++  LI+GL   GE+  A  + D M  +G LP+   YN L++GL  KG L  A  +L
Sbjct: 417 DMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVML 476

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGR--------------------------------- 347
             M+     P+   Y T+++G ++ G                                  
Sbjct: 477 TEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKS 536

Query: 348 -AVDGARVLMSMEERKFHVNE-YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
             +D A + +    R  HV + + +ST+I G  K+      +K++  M+++ CKPN V Y
Sbjct: 537 GMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTY 596

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           ++LI+G CR G+   AE++   M ++G   +  TYS L+  F +  K  KAV  ++ M  
Sbjct: 597 TSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLI 656

Query: 466 NNCVYNEVCYSVLIHGLC---------EDGKLRE-ARMVWTQMLSR----GCKPDVVAYS 511
           N C  N+  +  L++G           E   L E +R ++    SR    G      AY+
Sbjct: 657 NKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYN 716

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            ++  LC    V+ AL+L N+ML     S  D  ++  L++ +C + N     ++++  +
Sbjct: 717 CILICLCQQRMVKTALQLRNKMLAFGLCS--DAVSFVALIHGICLEGNSKEWRNMISCDL 774

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
           + G             ALK  LE  +    F+ E  I        SG   I++ M++ ++
Sbjct: 775 NEG---------ELQIALKYSLELDK----FIPEGGI-----SEASG---ILQAMIKGYV 813

Query: 632 SP 633
           SP
Sbjct: 814 SP 815



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/293 (18%), Positives = 118/293 (40%), Gaps = 53/293 (18%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           +I+ ++ SG   +  + + +MRR   V    +F  I   Y K H +   +++F  MV + 
Sbjct: 529 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQ- 587

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
           +CK  V ++ S++N   ++G    A + ++ +   +   + P+ +T++++I + C+   +
Sbjct: 588 NCKPNVVTYTSLINGYCRKGETKMAEKLFSMM---RSHGLKPSVVTYSILIGSFCKEAKL 644

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDG-------------------------------- 236
             A+  F  M +  C P+   +  L++G                                
Sbjct: 645 GKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMI 704

Query: 237 -----------------LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                            LC++  +  A+ L ++M   G     V+F  LI+G+C  G   
Sbjct: 705 GDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSK 764

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
               ++     +G L   + Y+  +     +G + +A  +L  M+     PN+
Sbjct: 765 EWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQ 817


>gi|255561437|ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539120|gb|EEF40716.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 629

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/595 (26%), Positives = 270/595 (45%), Gaps = 112/595 (18%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFK 126
           + F     L  +    ST+ +LIQ       F ++  +L  M         E+ F+ + +
Sbjct: 57  QTFKWASNLPKFTHSQSTYRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIR 116

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             G+A ++   I++   ++ +F    ++K FNS+L+V+++  +   A EFY         
Sbjct: 117 GLGRARMIPHVIKVL-DLISKFGKNPSLKIFNSILDVLVKVDI-DVAREFYR-------- 166

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
                                        ++M     + D YT+  LM GLC  NR+ + 
Sbjct: 167 -----------------------------KQMMGSGVQGDDYTFAILMKGLCLTNRIGDG 197

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             LL  M+  G  P  V +N L++ LCKNG++GRA  L+D +      PN+VT+N LI  
Sbjct: 198 FRLLQVMKSRGVKPNAVVYNTLLHALCKNGKVGRARSLMDEI----EEPNDVTFNVLIAA 253

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C + NL +A+ LL++  +   +P+ VT   ++  L   GR  +   +L  +E +   V+
Sbjct: 254 YCKEENLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVD 313

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+TL+ G  + GK + A +  K+M  KGC PN   Y+ LI G C  G  D A ++  
Sbjct: 314 VVAYNTLLRGFCRLGKIKVAHRFLKEMERKGCLPNVETYNILISGFCDSGMFDMALDMFN 373

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN-------CVYNEVCY---- 475
           +M  +G + N  TY +L+KG F  G+  + ++I + M ++          YN V Y    
Sbjct: 374 DMKTDGISWNFDTYDTLIKGLFFGGRIEEGLKILELMEESKGGSGGRISPYNSVLYGLYK 433

Query: 476 ------------------------SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
                                   S+ I G CE G ++ A+MV+ QM++ G  P+++ Y 
Sbjct: 434 KNMWDEALEFLMKMEKLFPRAVDRSLRILGFCEKGAVKNAKMVFDQMINEGGTPNILVYD 493

Query: 512 SMIHGLCNAGSVEEALKLFNEML------------------CLEPKSQ------------ 541
            ++HG C  G++ EA +L NEM+                  C + K +            
Sbjct: 494 CLVHGFCQEGNLREAFELMNEMVGHGYFLVASGFNALIHGFCGQGKDESALKLLDDMVGR 553

Query: 542 ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
              PD  TY+ L++ALC++ N   ++ + N M+++G  PD  T N  L  L +++
Sbjct: 554 GCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGITPDSSTWNSLLIRLSKEI 608


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/459 (30%), Positives = 231/459 (50%), Gaps = 57/459 (12%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K + + P+  T+ ++I + C+ GL++ A   F EM    C  ++ TY  L+    K  +L
Sbjct: 315 KSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQL 374

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA----AKLV---DNM----FLKG 292
            +A  + + M   GC P  +T++ L++GLCK GE+ +A     KL+   DN+    + +G
Sbjct: 375 PQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEG 434

Query: 293 -----CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                  PN VTY  LI GLC    +  A  LLD M+++ C PN + Y  +I+G  K+G+
Sbjct: 435 KHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGK 494

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +   V + M +  +    + Y++LI  +FK+ + + AMK+  QM+E  C PN V Y+A
Sbjct: 495 IDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTA 554

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +IDGLCR+G+  +A ++L  M   GC+ N  TY++L+ G  +SGK   +++++  M+   
Sbjct: 555 MIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKG 614

Query: 468 CVYNEVCYSVLIHGLCEDGKLREA--------RMVWTQML-------------------- 499
           C  N V Y VLI+  C  G L EA        +  W + L                    
Sbjct: 615 CAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGL 674

Query: 500 -----SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK---SQPDVFTYNILL 551
                S G  P    Y  +I     AG +EEAL+L  EM+ L      +  D++T   L+
Sbjct: 675 LEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTS--LI 732

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
            ALC  S +  + +L + +  +G  P+L   ++F+  +K
Sbjct: 733 QALCLASQLEKAFELYSEITRKGVVPEL---SVFVCLIK 768



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 241/474 (50%), Gaps = 27/474 (5%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  ++ KA L+E+A   F  M     C   V ++ ++L+  ++     +A + +N 
Sbjct: 325 TYTILIDSFCKAGLIEQARSWFDEM-RSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM----------------PVRNC 223
           +++A      PNT+T++ ++  +C+ G +  A +++ ++                   + 
Sbjct: 384 MIDA---GCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSI 440

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
            P++ TY  L+DGLCK +++ +A  LLD M  +GC P  + ++ LI+G CK G++  A +
Sbjct: 441 APNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQE 500

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           +   M   G LP   TY +LI  +     LD A+ +L +MV S C PN VTY  +I+GL 
Sbjct: 501 VFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLC 560

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           ++G      ++L  MEE+    N   Y+ LI GL K GK + +++L+ QM  KGC PN V
Sbjct: 561 RIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYV 620

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y  LI+  C  G  DEA  +L EM           Y S+++GF  S K   ++ + +++
Sbjct: 621 TYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEEL 678

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA---YSSMIHGLCNA 520
             +  V     Y +LI    + G+L EA  +  +M+      ++ +   Y+S+I  LC A
Sbjct: 679 ESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLA 738

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
             +E+A +L++E+        P++  +  L+  L K +  + ++ L  S+ D G
Sbjct: 739 SQLEKAFELYSEI--TRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEG 790



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 222/487 (45%), Gaps = 45/487 (9%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +T+    +I  +    L D AI     M   +C P++ TY TL+ G  K+ +L     ++
Sbjct: 106 DTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRII 165

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           + M  +GC P P  FN L++  C   +   A KL+  M   GC P  V YN  I  +C  
Sbjct: 166 NMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGG 225

Query: 311 GNLDK------AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
             L        A  + + M+AS C+ N+V        L  +G+     +++  M  + F 
Sbjct: 226 EELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFV 285

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   YS +I+ L +  K E A  L+++M   G  P+   Y+ LID  C+ G  ++A   
Sbjct: 286 PDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSW 345

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             EM + GC+AN  TY++L+  + ++ +  +A +I+  M    C  N + YS L+ GLC+
Sbjct: 346 FDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCK 405

Query: 485 DGKLREARMVWTQML----------------SRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
            G++++A  V+T+++                +    P+VV Y ++I GLC A  V +A +
Sbjct: 406 AGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQE 465

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L + M  L    +P+   Y+ L++  CK   I ++ ++   M   G  P + T    + A
Sbjct: 466 LLDAM--LSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDA 523

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                                +FK +R     K++  M++   +P   T+  ++  LCR 
Sbjct: 524 ---------------------MFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRI 562

Query: 649 KRIQAAI 655
              Q A+
Sbjct: 563 GECQKAL 569



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 134/334 (40%), Gaps = 38/334 (11%)

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+  TY  ++  L   G+   G RV   M E  F ++++        L KEG+  DA+ +
Sbjct: 38  PSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDALVM 97

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
            ++   +  K +TV+ + +I GL      DEA   L  M  N C  N  TY +L+ GF +
Sbjct: 98  IER---EDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLK 154

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
             +      I   M K  C  N   ++ L+H  C       A  +  +M   GC P  VA
Sbjct: 155 KKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVA 214

Query: 510 YSSMIHGLCNAGSVEE------ALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNI 560
           Y+  I  +C    +        A K++ EML   C+  K     F        LC     
Sbjct: 215 YNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA-----RCLCGMGKF 269

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  ++  MM +G  PD  T +  +T L E ++          E A  LF+  ++ G  
Sbjct: 270 DMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKV---------EKAFLLFQEMKSVG-- 318

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                     ++P   T+  ++   C+   I+ A
Sbjct: 319 ----------VNPDVYTYTILIDSFCKAGLIEQA 342



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/280 (21%), Positives = 118/280 (42%), Gaps = 54/280 (19%)

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E+ + G   +  TY++L++    +G+      + K+M+++    ++         LC++G
Sbjct: 30  ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89

Query: 487 KLREA------------RMVWTQMLS--------------------RGCKPDVVAYSSMI 514
           +  +A             ++ TQM+S                      C P+VV Y +++
Sbjct: 90  RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 149

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G      +    ++ N M  ++    P+   +N L+++ C   +  ++  LL  M D G
Sbjct: 150 TGFLKKKQLGWCKRIINMM--MKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCG 207

Query: 575 CDPDLVTCNIFLTAL--KEKLEAPQ-------------DGTDFLNELAIRLFKRQRTSGG 619
           C P  V  NIF+ ++   E+L +P                +  LN++    F R     G
Sbjct: 208 CPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMG 267

Query: 620 -----FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                F+I++VM+ K   P TST+ +V+  LC   +++ A
Sbjct: 268 KFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKA 307


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 165/582 (28%), Positives = 261/582 (44%), Gaps = 88/582 (15%)

Query: 83  DSTFYSLIQHY----ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           D   YS+  H      NSG   SL   L  MR    +  E +F  +  A  K   V EA+
Sbjct: 74  DQEAYSIFVHLLCLKPNSGYALSL---LREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 130

Query: 139 RLFHTMVDEFHCKRTVK--SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           RL   MV+   C +++      S++     +G    AL   N I  +    ++PN +T++
Sbjct: 131 RLKDDMVN---CGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISES---GLVPNKVTYS 184

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY---------------------------- 228
           ++I   C+ G ++ A + + EM  +     +Y                            
Sbjct: 185 VLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALES 244

Query: 229 ------TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
                 T+ TL+  LCKE +++EA  L DE+   G  P  V++N +I G C+   +  A 
Sbjct: 245 GLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAAC 304

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           K+   M   G  PN VT+  L+ G   KG+++ A S+  RM  +  +P + T G II GL
Sbjct: 305 KVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGL 364

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K GR+ +G  +      + F      Y+T+I G  KEG    A  ++++M E G  P+T
Sbjct: 365 CKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPST 424

Query: 403 VVYSALIDGLCRVGKPD-----------------------------------EAEEILFE 427
           V Y++LIDG C+    D                                    A E+L E
Sbjct: 425 VTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNE 484

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           +   G + N F Y+S++ GF       +A++++K M       +   Y+ LI GL + G+
Sbjct: 485 LRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGR 544

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFT 546
           L  A  + T+MLS+G  PD  A++ +I+GLCN G  E A K+  +M     K+  P V  
Sbjct: 545 LLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM---NGKNMIPSVLI 601

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           YN L+    K+ N+  +  L + M+DRG  PD +T +I +  
Sbjct: 602 YNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 205/435 (47%), Gaps = 8/435 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
           +F SV+   ++EG    AL   + +VN  K MN+   T     ++K  C  G + +A+ L
Sbjct: 112 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATS----LMKGYCMQGNLRSALVL 167

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
             E+      P+  TY  L+DG CK   +++A     EM+  G   +  + N ++ G  K
Sbjct: 168 VNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLK 227

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
                 A  + ++    G L N  T+NTL+  LC +G +++A +L D ++A    PN V+
Sbjct: 228 CQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 286

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y  II G  +        +V   M +  F  N   ++ L+ G FK+G  E+A  ++ +M 
Sbjct: 287 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 346

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           +    P       +I GLC+ G+  E  ++  + ++ G       Y++++ GF + G  +
Sbjct: 347 DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 406

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A  ++++M +     + V Y+ LI G C+   +  A  +   M  +G K D+ AY ++I
Sbjct: 407 LASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLI 466

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G C    ++ A +L NE+        P+ F YN ++      +N+  +IDL   M++ G
Sbjct: 467 DGFCKRRDMKSAHELLNELR--GAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEG 524

Query: 575 CDPDLVTCNIFLTAL 589
              DL T    +  L
Sbjct: 525 IPCDLKTYTSLIDGL 539



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 134/535 (25%), Positives = 231/535 (43%), Gaps = 83/535 (15%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +++  N +L  ++++ +   A E +N ++    + +  +  T +++++   + G +  A 
Sbjct: 4   SIQCMNILLTAMVRKNMTCEARELHNKML---LVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           Q F +   R  E D   Y   +  LC +     A+ LL EM+  G  P   TF  +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            K G +  A +L D+M   G   N     +L+ G C++GNL  A+ L++ +  S  +PN+
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFH---------------------------- 364
           VTY  +I+G  K G           M+ +                               
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 365 ------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
                  N + ++TL+S L KEGK  +A  LW +++ KG  PN V Y+ +I G CR    
Sbjct: 241 ALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNI 300

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           + A ++  EM++NG   NA T++ LM G+F+ G    A  I+  M   N +  +    ++
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 479 IHGLCEDGKLREARMVWTQMLSRG-------------------------------CK--- 504
           I GLC+ G+  E R ++ + +S+G                               C+   
Sbjct: 361 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 420

Query: 505 -PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P  V Y+S+I G C   +++ ALKL N+M       + D+  Y  L++  CK+ ++  +
Sbjct: 421 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMK--RKGLKMDIKAYGTLIDGFCKRRDMKSA 478

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            +LLN +   G  P+    N  +T  K              E AI L+K+    G
Sbjct: 479 HELLNELRGAGLSPNRFIYNSMITGFKNMNNV---------EEAIDLYKKMVNEG 524



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/446 (25%), Positives = 210/446 (47%), Gaps = 19/446 (4%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P I     L+  + ++N   EA  L ++M + G      T +V++    K G +  A + 
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQH 62

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
                 +G   ++  Y+  +H LCLK N   A+SLL  M A+  +P E T+ ++I   VK
Sbjct: 63  FLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVK 122

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G   +  R+   M      +N  + ++L+ G   +G    A+ L  ++ E G  PN V 
Sbjct: 123 EGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVT 182

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           YS LIDG C+ G  ++A E   EM   G  ++ ++ +S+++G+ +      A  ++ D A
Sbjct: 183 YSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND-A 241

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
             + + N   ++ L+  LC++GK+ EA  +W +++++G  P+VV+Y+++I G C   ++ 
Sbjct: 242 LESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNIN 301

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
            A K++ EM  L+    P+  T+ IL++   K+ +I ++  + + M D    P   T  I
Sbjct: 302 AACKVYKEM--LDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGI 359

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLF---------------KRQRTSGGFKIVEVMLQK 629
            +  L  K     +G D  N+   + F               K    +    +   M + 
Sbjct: 360 IIKGLC-KAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEV 418

Query: 630 FLSPQTSTWERVVQELCRPKRIQAAI 655
            ++P T T+  ++   C+   I  A+
Sbjct: 419 GITPSTVTYTSLIDGFCKGNNIDLAL 444



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/335 (27%), Positives = 167/335 (49%), Gaps = 5/335 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y K   +E A  +FH M D  +   T  +   ++  + + G      + +N 
Sbjct: 321 TFTILMDGYFKKGDIENAFSIFHRMKDA-NILPTDTTLGIIIKGLCKAGRSFEGRDLFNK 379

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
            V+      +P  + +N +I    + G ++ A  ++REM      P   TY +L+DG CK
Sbjct: 380 FVS---QGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCK 436

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            N +D A+ LL++M+  G       +  LI+G CK  ++  A +L++ +   G  PN   
Sbjct: 437 GNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFI 496

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN++I G     N+++A+ L  +MV      +  TY ++I+GL+K GR +  + +   M 
Sbjct: 497 YNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEML 556

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    ++  ++ LI+GL  +G+ E+A K+ + M  K   P+ ++Y+ LI G  + G   
Sbjct: 557 SKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQ 616

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           EA  +  EM++ G   +  TY  L+ G F+ G G+
Sbjct: 617 EAFRLHDEMLDRGLVPDNITYDILVNGKFK-GDGN 650


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 229/439 (52%), Gaps = 39/439 (8%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V  K   I      F+ V+ +  R G + +A+++   M     EP++    T +D   +
Sbjct: 230 LVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVR 289

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            NRL++A+  L+ MQV G  P  VT+N +I G C    +  A +L+++M  KGCLP++V+
Sbjct: 290 ANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVS 349

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           Y T++  LC +  + +   L+ +M     + P++VTY T+I+ L K   A +    L   
Sbjct: 350 YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDA 409

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGLCRVGK 417
           +E+ F +++  YS ++  L KEG+  +A  L  +M+ KG C P+ V Y+A+++G CR+G+
Sbjct: 410 QEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGE 469

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            D+A+++L  M  +G   N  +Y++L+ G   +GK  +A E+     ++    N + YSV
Sbjct: 470 VDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSV 529

Query: 478 LIHG-----------------------------------LCEDGKLREARMVWTQMLSRG 502
           ++HG                                   LC DG+  EAR    + L++G
Sbjct: 530 IMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKG 589

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C  +VV ++++IHG C    ++ AL + ++M  +      DVFTY  L++ L K+  I+ 
Sbjct: 590 CAINVVNFTTVIHGFCQNDELDAALSVLDDMYLI--NKHADVFTYTTLVDTLGKKGRIAE 647

Query: 563 SIDLLNSMMDRGCDPDLVT 581
           + +L+  M+ +G DP  VT
Sbjct: 648 ATELMKKMLHKGIDPTPVT 666



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 267/552 (48%), Gaps = 47/552 (8%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           Y+     +YS+++  + +   +    VL  M+R       ++F  +  +Y +A  + +A+
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           ++  T++     +  +   N+ ++V ++     +AL F   +   + + I+PN +T+N +
Sbjct: 263 KVL-TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM---QVVGIVPNVVTYNCM 318

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD-G 257
           I+  C L  V+ AI+L  +M  + C PD  +Y T+M  LCKE R+ E   L+ +M  + G
Sbjct: 319 IRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHG 378

Query: 258 CFPTPVTFNVLI-----------------------------------NGLCKNGELGRAA 282
             P  VT+N LI                                   + LCK G +  A 
Sbjct: 379 LVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438

Query: 283 KLVDNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            L++ M  KG C P+ VTY  +++G C  G +DKA  LL  M      PN V+Y  ++NG
Sbjct: 439 DLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNG 498

Query: 342 LVKLGRAVDGARVLMSM-EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           + + G++++ AR +M+M EE  +  N   YS ++ GL +EGK  +A  + ++M+ KG  P
Sbjct: 499 MCRTGKSLE-AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 557

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
             V  + L+  LCR G+  EA + + E +N GCA N   +++++ GF ++ +   A+ + 
Sbjct: 558 GPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVL 617

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
            DM   N   +   Y+ L+  L + G++ EA  +  +ML +G  P  V Y ++IH  C  
Sbjct: 618 DDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQM 677

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           G V++ + +  +M+      Q     YN ++  LC    +  +  LL  ++      D  
Sbjct: 678 GKVDDLVAILEKMI----SRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAK 733

Query: 581 TCNIFLTALKEK 592
           TC   +    +K
Sbjct: 734 TCYALMEGYLKK 745



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 201/422 (47%), Gaps = 8/422 (1%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLF 141
           D   Y+ + H     D     +   +  +EK   ++K  +  I  A  K   + EA  L 
Sbjct: 382 DQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLI 441

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           + M+ + HC   V ++ +V+N   + G   +A +    +    H    PNT+++  ++  
Sbjct: 442 NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK---PNTVSYTALLNG 498

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +CR G    A ++          P+  TY  +M GL +E +L EA  ++ EM + G FP 
Sbjct: 499 MCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 558

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
           PV  N+L+  LC++G    A K ++    KGC  N V + T+IHG C    LD A+S+LD
Sbjct: 559 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLD 618

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M       +  TY T+++ L K GR  +   ++  M  +        Y T+I    + G
Sbjct: 619 DMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG 678

Query: 382 KAEDAMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           K +D + + ++M+ +  C+    +Y+ +I+ LC +GK +EA+ +L +++     ++A T 
Sbjct: 679 KVDDLVAILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTC 735

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
            +LM+G+ + G    A ++   M   N + +      L   L   GK+ EA  +  +++ 
Sbjct: 736 YALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVE 795

Query: 501 RG 502
           RG
Sbjct: 796 RG 797


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/353 (34%), Positives = 194/353 (54%), Gaps = 2/353 (0%)

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +DG+    + +  + L++EMQ+ G  P P T+N +I  LCK G++  A +++  M  +G 
Sbjct: 195 LDGIKIALKGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGI 254

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            P+ V Y TLI G C  GN+  A  L D M   K  P+ +TY  +I GL + GR ++  +
Sbjct: 255 APDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADK 314

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   M  ++   +E  Y+ LI G  KEGK ++A  L  QM++ G  PN V Y+AL DGLC
Sbjct: 315 LFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLC 374

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           + G+ D A E+L EM   G   N +TY+SL+ G  ++G   +AV++ KDM       + V
Sbjct: 375 KCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAV 434

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y+ L+   C+  ++  A  +  QML R  +P VV ++ +++G C +G +E+  KL   M
Sbjct: 435 TYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWM 494

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             LE    P+  TYN L+   C ++N+  + ++   M  +G  PD  T NI +
Sbjct: 495 --LEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILI 545



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/396 (32%), Positives = 192/396 (48%), Gaps = 2/396 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  T+N VI  +C+ G V  A ++ REM      PD   Y TL+DG CK   +  A  L
Sbjct: 221 PNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRL 280

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            DEMQ     P  +T+  +I GLC+ G +  A KL   M  K   P+EVTY  LI G C 
Sbjct: 281 FDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCK 340

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G + +A SL ++M+     PN VTY  + +GL K G       +L  M  +   +N Y 
Sbjct: 341 EGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYT 400

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++L++GL K G  + A+KL K M   G  P+ V Y+ L+D  C+  +   A E+L +M+
Sbjct: 401 YNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQML 460

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +        T++ LM GF  SG      ++ K M +   + N   Y+ LI   C    +R
Sbjct: 461 DRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMR 520

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
               ++  M ++G  PD   Y+ +I G C A +++EA  L  +M  +       V +YN 
Sbjct: 521 ATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM--VGKGFNLTVSSYNA 578

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           L+    K+     + +L   M   G   D    NIF
Sbjct: 579 LIKGFYKRKKFLEARELFEQMRREGLVADREIYNIF 614



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 207/428 (48%), Gaps = 5/428 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N V+ ++ + G    A      +++     I P+ + +  +I   C+LG V +A +LF
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISE---GIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  R   PD  TY  ++ GLC+  R+ EA  L  EM      P  VT+  LI+G CK 
Sbjct: 282 DEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKE 341

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G++  A  L + M   G  PN VTY  L  GLC  G +D A  LL  M       N  TY
Sbjct: 342 GKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY 401

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            +++NGL K G      +++  ME   FH +   Y+TL+    K  +   A +L +QM++
Sbjct: 402 NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLD 461

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +  +P  V ++ L++G C  G  ++ E++L  M+  G   NA TY+SL+K +        
Sbjct: 462 RELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRA 521

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
             EI++ M     V +   Y++LI G C+   ++EA  +   M+ +G    V +Y+++I 
Sbjct: 522 TTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIK 581

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G        EA +LF +M         D   YNI  +    +  +  +++L +  +++  
Sbjct: 582 GFYKRKKFLEARELFEQM--RREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCL 639

Query: 576 DPDLVTCN 583
             D+ T N
Sbjct: 640 VGDIQTKN 647



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 202/408 (49%), Gaps = 11/408 (2%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
            ++L  EM ++  +P+ YTY  ++  LCK  ++ EA  +L EM  +G  P  V +  LI+
Sbjct: 207 VLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLID 266

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           G CK G +  A +L D M  +   P+ +TY  +I GLC  G + +A  L   MV  +  P
Sbjct: 267 GFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEP 326

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           +EVTY  +I+G  K G+  +   +   M +     N   Y+ L  GL K G+ + A +L 
Sbjct: 327 DEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELL 386

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            +M  KG + N   Y++L++GLC+ G  D+A +++ +M   G   +A TY++LM  + +S
Sbjct: 387 HEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKS 446

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            +  +A E+ + M         V ++VL++G C  G L +   +   ML +G  P+   Y
Sbjct: 447 REMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTY 506

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +S+I   C   ++    +++  M        PD  TYNIL+   CK  N+  +  L   M
Sbjct: 507 NSLIKQYCIRNNMRATTEIYRGMCA--KGVVPDGNTYNILIKGHCKARNMKEAWFLHRDM 564

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
           + +G +  + + N  +    ++         FL   A  LF++ R  G
Sbjct: 565 VGKGFNLTVSSYNALIKGFYKR-------KKFLE--ARELFEQMRREG 603



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 23/203 (11%)

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           KG   +++ ++M       N   Y+ +I  LC+ GK+ EA  V  +M+S G  PD V Y+
Sbjct: 203 KGEWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYT 262

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           ++I G C  G+V  A +LF+EM   + K  PD  TY  ++  LC+   +  +  L + M+
Sbjct: 263 TLIDGFCKLGNVSSAYRLFDEMQ--KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV 320

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
            +  +PD VT     TAL        DG            K  +    F +   MLQ  L
Sbjct: 321 CKRLEPDEVT----YTAL-------IDG----------YCKEGKMKEAFSLHNQMLQMGL 359

Query: 632 SPQTSTWERVVQELCRPKRIQAA 654
           +P   T+  +   LC+   +  A
Sbjct: 360 TPNIVTYTALADGLCKCGEVDTA 382



 Score = 42.7 bits (99), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 30/171 (17%)

Query: 491 ARMVWTQMLSRG-------CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           AR ++ +ML+ G       C   +   S  + G+  A   E  LKL  EM     K  P 
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNP- 223

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
            +TYN ++  LCK   ++ +  +L  M+  G  PD V   I+ T +        DG    
Sbjct: 224 -YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGV---IYTTLI--------DG---- 267

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   K    S  +++ + M ++ +SP   T+  V+  LC+  R+  A
Sbjct: 268 ------FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEA 312


>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Glycine max]
          Length = 631

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 149/523 (28%), Positives = 258/523 (49%), Gaps = 6/523 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           + F    K  +++   +T+ +LI+       F  +   +  M +    +       I + 
Sbjct: 103 QFFKWAGKRRNFEHDSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRI 162

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
            GKA +V  A+ +F+  V    C+ T  ++NS++ +++QEG + +  E YN + +  H  
Sbjct: 163 LGKAKMVNRALSVFYQ-VKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVH-- 219

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             P+T+T++ +I    +L   D+AI+LF EM     +P    Y TLM    K  +++EA+
Sbjct: 220 CFPDTVTYSALISAFAKLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEAL 279

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+ EM+   C  T  T+  LI GL K+G +  A     NM   GC P+ V  N LI+ L
Sbjct: 280 GLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINIL 339

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVN 366
               +L  A+ L D M    C PN VTY TII  L +    +  A      M++     +
Sbjct: 340 GRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPS 399

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + YS LI G  K  + E A+ L ++M EKG  P    Y +LI+ L    + D A E+  
Sbjct: 400 SFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQ 459

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E+  N   ++A  Y+ ++K F + G+ ++A+ ++ +M K  C  +   Y+ L+ G+    
Sbjct: 460 ELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNALMTGMVRAE 519

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           ++ EA  ++  M   GC PD+ +++ +++GL   G  + AL++F +M       +PDV +
Sbjct: 520 RMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKMK--NSTIKPDVVS 577

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +N +L  L +      +  L+  M  +G   DL+T +  L A+
Sbjct: 578 FNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAV 620



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 168/371 (45%), Gaps = 43/371 (11%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +L+  Y   G  +    ++  MR  + ++   ++  + +  GK+  VE+A   +  M+
Sbjct: 262 YTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNML 321

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            +  CK  V   N+++N++ +      A++ ++ +   K +N  PN +T+N +IK++   
Sbjct: 322 KD-GCKPDVVLMNNLINILGRSNHLRDAIKLFDEM---KLLNCAPNVVTYNTIIKSLFEA 377

Query: 206 -GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +  A   F  M      P  +TY  L+DG CK NR+++A+LLL+EM   G  P P  
Sbjct: 378 KAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 437

Query: 265 FNVLINGLC-----------------------------------KNGELGRAAKLVDNMF 289
           +  LIN L                                    K G L  A  L + M 
Sbjct: 438 YCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGRLNEAINLFNEMK 497

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
             GC P+   YN L+ G+     +D+A SL   M  + C P+  ++  I+NGL + G   
Sbjct: 498 KLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPK 557

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               +   M+      +   ++T++  L + G  E+A KL ++M  KG + + + YS+++
Sbjct: 558 GALEMFTKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSIL 617

Query: 410 DGLCRVGKPDE 420
           +    VGK D+
Sbjct: 618 EA---VGKVDD 625



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 148/361 (40%), Gaps = 58/361 (16%)

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           +  TY  LI  L       +    +  MV   C         I+  L K         V 
Sbjct: 117 DSTTYMALIRCLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVF 176

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM-MEKGCKPNTVVYSALIDGLCR 414
             ++ RK       Y+++I  L +EG  E   +L+ +M  E  C P+TV YSALI    +
Sbjct: 177 YQVKGRKCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAK 236

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           + + D A  +  EM  NG    A  Y++LM  +F+                         
Sbjct: 237 LNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKV------------------------ 272

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
                      GK+ EA  +  +M +R C   V  Y+ +I GL  +G VE+A   +  ML
Sbjct: 273 -----------GKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNML 321

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
             +   +PDV   N L+N L + +++  +I L + M    C P++VT N  + +L E  +
Sbjct: 322 --KDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEA-K 378

Query: 595 APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           AP      L+E A   F+R +  G            + P + T+  ++   C+  R++ A
Sbjct: 379 AP------LSE-ASSWFERMKKDG------------IVPSSFTYSILIDGYCKTNRVEKA 419

Query: 655 I 655
           +
Sbjct: 420 L 420


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/543 (26%), Positives = 260/543 (47%), Gaps = 31/543 (5%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           F  + + + +   ++ A+ L   M     H    +  +N  ++   + G    A +F++ 
Sbjct: 236 FTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVL--YNVCIDCFGKAGKVDMAWKFFHE 293

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           I   K   +LP+ +T+  +I  +C+   +D A+++F +M      P  Y Y T++ G   
Sbjct: 294 I---KSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGS 350

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             + DEA  LL+  +  GC P+ + +N ++  L K G LG A +  + M  K   PN  T
Sbjct: 351 AGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM-KKDAAPNLST 409

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN LI  LC  G ++ A  + D M  +   PN +T   +I+ L K  +  +   +   M 
Sbjct: 410 YNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMN 469

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    +E  + +LI GL K+G+ +DA +L++QM++    PN VVY++LI    + G+ +
Sbjct: 470 HKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKE 529

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +  +I  EMI+ GC+ +    ++ M   F++G+  K   +++++     + + + YS+LI
Sbjct: 530 DGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILI 589

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           HGL + G  RE   ++  M  +GC  D  AY++ I G C +G V +A +L  EM      
Sbjct: 590 HGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKT--KG 647

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            QP V TY  +++ L K   +  +  L       G + ++V  +  +           DG
Sbjct: 648 RQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLI-----------DG 696

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCW 659
                       K  R    + I+E ++QK L+P   TW  ++  L + + I  A+  C+
Sbjct: 697 ----------FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEAL-VCF 745

Query: 660 SNL 662
            N+
Sbjct: 746 QNM 748



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 144/542 (26%), Positives = 253/542 (46%), Gaps = 42/542 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F     +L R +    +    ++  I    GK   + EA+R F  M
Sbjct: 340 AYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM 399

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      + ++N +++++ + G    A +  + +   K   + PN +T N++I  +C+
Sbjct: 400 KKD--AAPNLSTYNVLIDMLCKAGEVEAAFKVRDAM---KEAGLFPNVMTVNIMIDRLCK 454

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A  +F  M  + C PD  T+C+L+DGL K+ R+D+A  L ++M      P  V 
Sbjct: 455 AKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVV 514

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI    K G      K+   M  +GC P+    N  +  +   G   K  +L + + 
Sbjct: 515 YTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIK 574

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +   +P+ ++Y  +I+GLVK G A +   +  +M+E+   ++ + Y+T I G  K GK  
Sbjct: 575 SRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVN 634

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A +L ++M  KG +P  V Y ++IDGL ++ + DEA  +  E  +NG   N   YSSL+
Sbjct: 635 KAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLI 694

Query: 445 KGFFESGKGHKAVEIWKDMAKN---------NCVY------------------------- 470
            GF + G+  +A  I +++ +          NC+                          
Sbjct: 695 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGT 754

Query: 471 -NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N + YS+LI+GLC   K  +A + W +M  +G KP+ + Y++MI GL  AG++ EA  L
Sbjct: 755 PNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSL 814

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F           PD  +YN ++  L        +  +      +GC+    TC   L AL
Sbjct: 815 FERFKA--NGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDAL 872

Query: 590 KE 591
           ++
Sbjct: 873 QK 874



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/411 (25%), Positives = 198/411 (48%), Gaps = 6/411 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF SLI      G       +  +M    ++     +  + K++ K    E+  ++F  M
Sbjct: 479 TFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEM 538

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C   ++  N+ ++ + + G   +    +  I   K    +P+ ++++++I  + +
Sbjct: 539 IHR-GCSPDLRLLNAYMDCVFKAGETGKGRALFEEI---KSRGFIPDVMSYSILIHGLVK 594

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G      +LF  M  + C  D + Y T +DG CK  ++++A  LL+EM+  G  PT VT
Sbjct: 595 AGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVT 654

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +I+GL K   L  A  L +     G   N V Y++LI G    G +D+A  +++ ++
Sbjct: 655 YGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 714

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PN  T+  +++ LVK     +      +M+  K   N   YS LI+GL +  K  
Sbjct: 715 QKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFN 774

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A   W++M ++G KPNT+ Y+ +I GL + G   EA  +      NG   ++ +Y++++
Sbjct: 775 KAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAII 834

Query: 445 KGFFESGKGHKAVEIWKDMAKNNC-VYNEVCYSVLIHGLCEDGKLREARMV 494
           +G   S +  +A +I+++     C ++ + C + L+  L +D  L +A +V
Sbjct: 835 EGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIA-LLDALQKDECLEQAAIV 884



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 177/400 (44%), Gaps = 7/400 (1%)

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           IQ  R+   R   P    Y TL+  L      D  + L  +MQ  G   +   F  +I  
Sbjct: 186 IQCMRKFKFR---PAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRV 242

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
             + G L  A  L+D M       + V YN  I      G +D A      + +   +P+
Sbjct: 243 FAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPD 302

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
           +VTY ++I  L K  R  +   +   ME+ +     Y Y+T+I G    GK ++A  L +
Sbjct: 303 DVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLE 362

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +   +GC P+ + Y+ ++  L + G+  EA    FE +    A N  TY+ L+    ++G
Sbjct: 363 RQKARGCIPSVIAYNCILTCLGKKGRLGEALRT-FEEMKKDAAPNLSTYNVLIDMLCKAG 421

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +   A ++   M +     N +  +++I  LC+  KL EA  ++  M  + C PD V + 
Sbjct: 422 EVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFC 481

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           S+I GL   G V++A +L+ +M  L+    P+   Y  L+ +  K         +   M+
Sbjct: 482 SLIDGLGKQGRVDDAYRLYEQM--LDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMI 539

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
            RGC PDL   N ++  + +  E  + G     E+  R F
Sbjct: 540 HRGCSPDLRLLNAYMDCVFKAGETGK-GRALFEEIKSRGF 578



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 208/451 (46%), Gaps = 40/451 (8%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR-LDEAV--LLLDEMQVDGCFPTPVT 264
           V+NA+ LF E P  +          L+ G+ +  + +++A+      E + D     P  
Sbjct: 82  VENALSLFVESPKTD----------LVIGVLRRAKDVNQAISYFRWTERKTDQAL-CPEA 130

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN-LDKAVSLLDRM 323
           ++ L+  + KN +     +++  M + G  P+  T   LI   C+K N L +   L+  M
Sbjct: 131 YDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIELILS-CIKSNKLREGFDLIQCM 189

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              K  P    Y T+I  L  +  +     +   M+E  + V+ ++++T+I    +EG+ 
Sbjct: 190 RKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRL 249

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A+ L  +M       + V+Y+  ID   + GK D A +   E+ ++G   +  TY+S+
Sbjct: 250 DAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSM 309

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +    +  +  +AVEI++ M +N  V     Y+ +I G    GK  EA  +  +  +RGC
Sbjct: 310 IGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGC 369

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P V+AY+ ++  L   G + EAL+ F EM   +  + P++ TYN+L++ LCK   +  +
Sbjct: 370 IPSVIAYNCILTCLGKKGRLGEALRTFEEM---KKDAAPNLSTYNVLIDMLCKAGEVEAA 426

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
             + ++M + G  P+++T NI +                      RL K ++      I 
Sbjct: 427 FKVRDAMKEAGLFPNVMTVNIMID---------------------RLCKAKKLDEACSIF 465

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           E M  K  SP   T+  ++  L +  R+  A
Sbjct: 466 EGMNHKICSPDEVTFCSLIDGLGKQGRVDDA 496


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 207/389 (53%), Gaps = 8/389 (2%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T TFN++++ +C  G    A++L R+MP     P+  TY T++ G C   R+  A+ ++ 
Sbjct: 154 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 209

Query: 252 EM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLCL 309
           EM +  G  P   T+  +I+G CK G +  A K+ D M  KG + P  V YN LI G C 
Sbjct: 210 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 269

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G LD A+   DRMV         TY  +++ L   GR  +   ++  M  +   ++ + 
Sbjct: 270 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT 329

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI+G  KEG  + A+++++ M  +G +   V Y++LI  L + G+  E +++  E +
Sbjct: 330 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 389

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +   Y++L+     SG   +A EI  +M K     ++V Y+ L+ GLC  G++ 
Sbjct: 390 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 449

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EAR +  +M  RG +PD+V Y+++I G    G V++AL++ NEM+       P + TYN 
Sbjct: 450 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM--NKGFNPTLLTYNA 507

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           L+  LCK      + +++  M++ G  PD
Sbjct: 508 LIQGLCKNGQGDDAENMVKEMVENGITPD 536



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 205/421 (48%), Gaps = 13/421 (3%)

Query: 141 FHTMVDEFHCKRTV--KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           F    D F  +  +   +FN +L  +   G   RALE    +         PN +T+N V
Sbjct: 139 FALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-------PNAVTYNTV 191

Query: 199 IKTVCRLGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           I   C  G V  A+ + REM  R    P+ YTY T++ G CK  R+DEAV + DEM   G
Sbjct: 192 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 251

Query: 258 -CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P  V +N LI G C  G+L  A    D M  +G      TYN L+H L + G   +A
Sbjct: 252 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 311

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             L++ M       +  TY  +ING  K G       +  +M  R        Y++LI  
Sbjct: 312 YELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYA 371

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K+G+ ++  KL+ + + +G +P+ V+Y+ALI+     G  D A EI+ EM     A +
Sbjct: 372 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 431

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY++LM+G    G+  +A ++  +M K     + V Y+ LI G    G +++A  +  
Sbjct: 432 DVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRN 491

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M+++G  P ++ Y+++I GLC  G  ++A  +  EM  +E    PD  TY  L+  L  
Sbjct: 492 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM--VENGITPDDSTYISLIEGLTT 549

Query: 557 Q 557
           +
Sbjct: 550 E 550



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 198/387 (51%), Gaps = 29/387 (7%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TFN+++  LC  G+  RA +L+  M      PN VTYNT+I G C +G +  A+ ++  
Sbjct: 155 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 210

Query: 323 MVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSMEER-KFHVNEYIYSTLISGLFKE 380
           M     + PN+ TYGT+I+G  K+GR  +  +V   M  + +      +Y+ LI G   +
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK + A+    +M+E+G       Y+ L+  L   G+  EA E++ EM   G A + FTY
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+ G  + G   KA+EI+++M++       V Y+ LI+ L + G+++E   ++ + + 
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           RG +PD+V Y+++I+    +G+++ A ++  EM   + +  PD  TYN L+  LC    +
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME--KKRIAPDDVTYNTLMRGLCLLGRV 448

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  L++ M  RG  PDLVT N  ++    K        D  + L IR           
Sbjct: 449 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMK-------GDVKDALRIR----------- 490

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCR 647
                M+ K  +P   T+  ++Q LC+
Sbjct: 491 ---NEMMNKGFNPTLLTYNALIQGLCK 514



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 189/364 (51%), Gaps = 4/364 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ ++I  + + G  ++   ++  MR    +   + ++  +   + K   V+EA+++F  
Sbjct: 187 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 246

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ +   K     +N+++     +G    AL + + +V      +     T+NL++  + 
Sbjct: 247 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV---ERGVAMTVATYNLLVHALF 303

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G    A +L  EM  +    D++TY  L++G CKE  + +A+ + + M   G   T V
Sbjct: 304 MDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 363

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  LI  L K G++    KL D    +G  P+ V YN LI+     GN+D+A  ++  M
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              +  P++VTY T++ GL  LGR  +  +++  M +R    +   Y+TLISG   +G  
Sbjct: 424 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 483

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +DA+++  +MM KG  P  + Y+ALI GLC+ G+ D+AE ++ EM+ NG   +  TY SL
Sbjct: 484 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 543

Query: 444 MKGF 447
           ++G 
Sbjct: 544 IEGL 547



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 154/307 (50%), Gaps = 34/307 (11%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ ++  L   GK   A++L +QM     +PN V Y+ +I G C  G+   A +I+ EM 
Sbjct: 157 FNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 212

Query: 430 -NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE-VCYSVLIHGLCEDGK 487
              G A N +TY +++ G+ + G+  +AV+++ +M     V  E V Y+ LI G C+ GK
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 272

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQPD 543
           L  A +   +M+ RG    V  Y+ ++H L   G   EA +L  EM    L L      D
Sbjct: 273 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAL------D 326

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
           VFTYNIL+N  CK+ N+  ++++  +M  RG    +VT    + AL +K +  +  TD L
Sbjct: 327 VFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE--TDKL 384

Query: 604 NELAIR------------LFKRQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            + A+R            L     TSG     F+I+  M +K ++P   T+  +++ LC 
Sbjct: 385 FDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCL 444

Query: 648 PKRIQAA 654
             R+  A
Sbjct: 445 LGRVDEA 451



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 53/235 (22%)

Query: 85  TFYSLIQHYANSGDFK-SLEMVLYRMRREKR--VVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  LI  +   G+ K +LE+     RR  R  VV   S I+     G+   V+E  +LF
Sbjct: 329 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ---VQETDKLF 385

Query: 142 HTMVDEFHCKRTVKS----FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
              V     +R ++     +N+++N     G   RA E    +   +   I P+ +T+N 
Sbjct: 386 DEAV-----RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR---IAPDDVTYNT 437

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM----------------------- 234
           +++ +C LG VD A +L  EM  R  +PD+ TY TL+                       
Sbjct: 438 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 497

Query: 235 ------------DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
                        GLCK  + D+A  ++ EM  +G  P   T+  LI GL    E
Sbjct: 498 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 552


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/457 (30%), Positives = 232/457 (50%), Gaps = 17/457 (3%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A++ F  M+      R++ SFN +L  + +   Y +    Y  +  A    + PN  T 
Sbjct: 79  QALQFFDLMM------RSIISFNLLLGALAKIKHYSQVFSLYKKMHLA---GLSPNFFTL 129

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N++I  +C +  V   +     +  R   PD+ TY +L+ GLC E+R+ EA  L   MQ 
Sbjct: 130 NILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQK 189

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM------FLKGCLPNEVTYNTLIHGLCL 309
            GC+P  VT+  LI GLC+ G +  A KL   M      +   C PN  +YN +I  LC 
Sbjct: 190 LGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCK 249

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G   +A  L + MV     P+ VT+  +I+ L K G  ++  + L +M  R    + + 
Sbjct: 250 IGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFT 309

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +++LI G    G  + A +L+  M  KG +P+ + Y+ LI G C+    +EA ++  EM+
Sbjct: 310 FTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEML 369

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  T+  L+KG F +GK   A +++  +  +    N    SV + GLC++G L 
Sbjct: 370 RVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLF 429

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  ++ ++ S   K D+ +++ +I GLC A  +E A +LF ++   +   QPDV TY I
Sbjct: 430 EAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLS--QEGLQPDVVTYCI 487

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           ++N  CK   + ++  L   M + GC P+L+T +  L
Sbjct: 488 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALL 524



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 196/370 (52%), Gaps = 6/370 (1%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM-----PVR-NCE 224
           HR  E     +  + +   PN +T+  +IK +CR G ++ A++L +EM     P   NC+
Sbjct: 175 HRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCK 234

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P+I++Y  ++D LCK  +  EA  L +EM   G  P  VTF+ LI+ LCK G +  A K 
Sbjct: 235 PNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKF 294

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           ++ M L+G +P+  T+ +LI G CL G+LD A  L   M +    P+ ++Y  +I G  K
Sbjct: 295 LETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCK 354

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
                +  ++   M       +   +  L+ GLF  GK  DA KL+  +       N  +
Sbjct: 355 TFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYI 414

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
            S  +DGLC+ G   EA E+  E+ +     +  +++ L+ G  ++ K   A E+++ ++
Sbjct: 415 CSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLS 474

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +     + V Y ++I+G C++G++  A +++  M   GC P+++ YS+++HG      +E
Sbjct: 475 QEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLE 534

Query: 525 EALKLFNEML 534
           E +KL ++M+
Sbjct: 535 EVVKLLHKMI 544



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 198/385 (51%), Gaps = 4/385 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + K     H + EA RLF  M  +  C   V ++ +++  + + G  + AL+ +  
Sbjct: 163 TYTSLIKGLCMEHRISEATRLFIRM-QKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQE 221

Query: 180 IVNAKH---MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           ++N      +N  PN  ++N++I  +C++G    A +LF EM  +   PD+ T+  L+D 
Sbjct: 222 MLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDT 281

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LCKE  + EA   L+ M + G  P   TF  LI G C  G+L  A +L  +M  KG  P+
Sbjct: 282 LCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPD 341

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            ++Y  LI+G C   N+++A+ L + M+     P+  T+  ++ GL   G+  D  ++  
Sbjct: 342 VISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFG 401

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            ++      N YI S  + GL K G   +AM+L+ ++     K +   ++ LIDGLC+  
Sbjct: 402 VVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKAR 461

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K + A E+  ++   G   +  TY  ++ GF ++G+   A  +++ M +N C  N + YS
Sbjct: 462 KLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYS 521

Query: 477 VLIHGLCEDGKLREARMVWTQMLSR 501
            L+HG  ++ KL E   +  +M+ +
Sbjct: 522 ALLHGFYKNNKLEEVVKLLHKMIQK 546



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/412 (27%), Positives = 199/412 (48%), Gaps = 22/412 (5%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           ++FN+L+  L K     +   L   M L G  PN  T N LI+ LC    + + +S +  
Sbjct: 92  ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAG 151

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           ++    +P+ VTY ++I GL    R  +  R+ + M++     N   Y TLI GL + G 
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 211

Query: 383 AEDAMKLWKQMMEK------GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
              A+KL ++M+         CKPN   Y+ +ID LC++GK  EA+ +  EM++ G   +
Sbjct: 212 INLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPD 271

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             T+S+L+    + G   +A +  + M     V +   ++ LI G C  G L  A+ ++ 
Sbjct: 272 VVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M S+G +PDV++Y+ +I+G C   +VEEA+KL+NEML       PD+ T+ +LL  L  
Sbjct: 332 SMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEML--RVGKWPDMKTFCVLLKGLFL 389

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA------LKEKLEAPQDGTDFLNELAIRL 610
              +  +  L   +       +L  C++FL        L E +E   +   +  +L I  
Sbjct: 390 AGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIES 449

Query: 611 F--------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           F        K ++    +++ E + Q+ L P   T+  ++   C+  ++  A
Sbjct: 450 FNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNA 501



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 157/323 (48%), Gaps = 11/323 (3%)

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G +     L    F    + + +++N L+  L    +  +  SL  +M  +   PN 
Sbjct: 70  CKKGNITSTQAL---QFFDLMMRSIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNF 126

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            T   +IN L  + R  +G   +  +  R +  +   Y++LI GL  E +  +A +L+ +
Sbjct: 127 FTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIR 186

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN------GCAANAFTYSSLMKG 446
           M + GC PN V Y  LI GLCR G  + A ++  EM+N        C  N F+Y+ ++  
Sbjct: 187 MQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             + GK  +A  ++ +M       + V +S LI  LC++G + EA+     M+ RG  PD
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           +  ++S+I G C  G ++ A +LF  M       +PDV +Y +L+   CK  N+  ++ L
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMP--SKGYEPDVISYTVLIYGYCKTFNVEEAMKL 364

Query: 567 LNSMMDRGCDPDLVTCNIFLTAL 589
            N M+  G  PD+ T  + L  L
Sbjct: 365 YNEMLRVGKWPDMKTFCVLLKGL 387


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/475 (29%), Positives = 234/475 (49%), Gaps = 10/475 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKR----TVKSFNSVLNVIIQEGLYHRALE 175
           S+  + K     +  ++A+ L HTM+     +      V S+N+V+N +++EG   R L+
Sbjct: 164 SYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREG---RQLD 220

Query: 176 FYNHIVNAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
              H+ +      + P+ +T+N +I  + +   +D A  +   M      P+  T+ +L+
Sbjct: 221 TAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            G C   + ++A+ +   M  DG  P   T+N L+  LCKNG    A K+ D+M  +G  
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHK 340

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN  TY TL+HG   +G+L K   LLD MV +   P+   +  +I    K G+  D   +
Sbjct: 341 PNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLL 400

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M  +  + +   Y  ++  L   GK +DAM  + +++ +G  P+ VV+  LI GLC 
Sbjct: 401 FSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCA 460

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
             K D+AEE+  EMI  G   N   +++L+    + G   +A  I+  M + +   + + 
Sbjct: 461 RDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVIT 520

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ LI G C  GK+ EA  +   M+  G KP+ V Y++MI+G C  G +E+A  LF +M 
Sbjct: 521 YNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQM- 579

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                  P + TY+ +L  L +    + + +L   M+  G   D+ T NI L  L
Sbjct: 580 -ASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGL 633



 Score =  215 bits (547), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 241/488 (49%), Gaps = 31/488 (6%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQL-FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
            +TF+ ++K +C       A+ +  R MPV  C P++++Y  L+ GLC ENR  +A+ LL
Sbjct: 126 AITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLL 185

Query: 251 DEMQV-----DGCFPTPVTFNVLINGLCKNG-ELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
             M V      G  P  V++N +INGL + G +L  A  L D M  +G  P+ VTYN++I
Sbjct: 186 HTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSII 245

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
             L     +DKA  +L RMV +  MPN +T+ ++++G    G+  D   V   M      
Sbjct: 246 SALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVE 305

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            + + Y+TL+  L K G++ +A K++  M+++G KPN+  Y  L+ G    G   +   +
Sbjct: 306 PDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHL 365

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L  M+ NG   + + ++ L+  + + GK   A+ ++  M +     + V Y +++  LC 
Sbjct: 366 LDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCM 425

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKS 540
            GK+ +A   + +++S G  PD V + ++IHGLC     ++A +L  EM    +C     
Sbjct: 426 VGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGIC----- 480

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQ- 597
            P+   +N LLN LCK+  ++ + ++ + M+      D++T N  +    L  K++    
Sbjct: 481 -PNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAK 539

Query: 598 -------DGTD----FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                  DG        N +     K  R    F +   M  K ++P   T+  ++Q L 
Sbjct: 540 LLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLF 599

Query: 647 RPKRIQAA 654
           + +R  AA
Sbjct: 600 QARRTAAA 607



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 224/441 (50%), Gaps = 12/441 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T  SL+  Y +SG       V  RM R   E  V    + +      G++    EA ++F
Sbjct: 275 THNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSM---EARKIF 331

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIK 200
            +MV   H K    ++ ++L+    EG    +L   +H+++    N I P+   FN++I 
Sbjct: 332 DSMVKRGH-KPNSATYGTLLHGYATEG----SLVKMHHLLDMMVRNGIQPDHYIFNILIG 386

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
           T  + G VD+A+ LF +M  +   PD  TY  +MD LC   ++D+A+     +  +G  P
Sbjct: 387 TYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTP 446

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             V F  LI+GLC   +  +A +L   M  +G  PN + +NTL++ LC +G + +A ++ 
Sbjct: 447 DAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIF 506

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D MV      + +TY T+I+G    G+  + A++L  M       NE  Y+T+I+G  K 
Sbjct: 507 DLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKN 566

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ EDA  L++QM  KG  P  V YS ++ GL +  +   A+E+   MI +G   +  TY
Sbjct: 567 GRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTY 626

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  ++     A+ I++++   +       ++++I  L + G+  EA+ ++  +L+
Sbjct: 627 NIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLA 686

Query: 501 RGCKPDVVAYSSMIHGLCNAG 521
           RG  P+VV Y  M+  L   G
Sbjct: 687 RGLVPNVVTYWLMMKSLIEQG 707



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 123/466 (26%), Positives = 202/466 (43%), Gaps = 75/466 (16%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           +IF+S  K G ++   +T+ +L+  YA  G    +  +L  M R         F  +   
Sbjct: 329 KIFDSMVKRG-HKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGT 387

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y K   V++A+ LF  M                                       +   
Sbjct: 388 YTKHGKVDDAMLLFSKM---------------------------------------RRQG 408

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           + P+T+T+ +V+  +C +G VD+A+  F  +      PD   +  L+ GLC  ++ D+A 
Sbjct: 409 LNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAE 468

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L  EM   G  P  + FN L+N LCK G + RA  + D M       + +TYNTLI G 
Sbjct: 469 ELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGY 528

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           CL G +D+A  LL+ MV     PNEVTY T+ING  K GR  D   +   M  +  +   
Sbjct: 529 CLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGI 588

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC-------------- 413
             YST++ GLF+  +   A +L+  M++ G K +   Y+ ++ GLC              
Sbjct: 589 VTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQN 648

Query: 414 ---------------------RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
                                + G+ DEA+++   ++  G   N  TY  +MK   E G 
Sbjct: 649 LYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGL 708

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
             +  +++  + KN C  N    + L+  L + G++R+A +  +++
Sbjct: 709 LEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKI 754



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 141/311 (45%), Gaps = 38/311 (12%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           FN++LN + +EG+  RA   ++ +V    +++  + +T+N +I   C  G VD A +L  
Sbjct: 486 FNTLLNHLCKEGMVARAKNIFDLMV---RVDVQRDVITYNTLIDGYCLHGKVDEAAKLLE 542

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M +   +P+  TY T+++G CK  R+++A  L  +M   G  P  VT++ ++ GL +  
Sbjct: 543 GMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQAR 602

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
               A +L   M   G   +  TYN ++ GLC     D A+                   
Sbjct: 603 RTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDAL------------------- 643

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
                           R+  ++    FH+    ++ +I  L K G+ ++A  L+  ++ +
Sbjct: 644 ----------------RIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLAR 687

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  PN V Y  ++  L   G  +E +++   +  NGC AN+   ++L+    + G+  KA
Sbjct: 688 GLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALVGKLLQKGEVRKA 747

Query: 457 VEIWKDMAKNN 467
                 + +NN
Sbjct: 748 GVYLSKIDENN 758



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 33/275 (12%)

Query: 386 AMKLWKQMM---EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           A+ L+++M+        PN + YS +ID   RVG  D A   L  +I +G  A A T+S 
Sbjct: 72  AISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSP 131

Query: 443 LMKGFFESGKGHKAVEI-WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA-RMVWTQMLS 500
           L+K   +  +  +A++I  + M    C  N   Y++L+ GLC++ + ++A  ++ T M++
Sbjct: 132 LLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVA 191

Query: 501 R----GCKPDVVAYSSMIHGLCNAG-SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
                G  PDVV+Y+++I+GL   G  ++ A  LF++M  L+    PDV TYN +++AL 
Sbjct: 192 DDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQM--LDQGLSPDVVTYNSIISALS 249

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           K   +  +  +L  M+  G  P+ +T N  L         P D        AI +FKR  
Sbjct: 250 KARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSS-GKPND--------AIGVFKR-- 298

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                     M +  + P   T+  ++  LC+  R
Sbjct: 299 ----------MCRDGVEPDVFTYNTLMGYLCKNGR 323


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 214/405 (52%), Gaps = 2/405 (0%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
           H   LP+ + F  ++     L   +  I   ++M +     D+Y++  L+   C+ +RL 
Sbjct: 64  HSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLS 123

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            A+ +L +M   G  P+ VTF  L++G C    +G A  LV  M   G  PN V YNTLI
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLC  G L+ A+ LL+ M       + VTY T++ GL   GR  D AR+L  M +R  +
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   ++ LI    K+G  ++A +L+K+M++    PN V Y+++I+GLC  G+  +A++ 
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              M + GC  N  TY++L+ GF +     + +++++ M+      +   Y+ LIHG C+
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            GKLR A  ++  M+SR   PD++ +  ++HGLC  G +E AL  F++M   E +    +
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR--ESEKYIGI 421

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             YNI+++ LCK   +  + +L   +   G  PD  T  I +  L
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/442 (31%), Positives = 218/442 (49%), Gaps = 10/442 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A  LF  MV       ++  F  +L        Y   + F   +   +   I  +  +
Sbjct: 53  EDAFALFFEMVHS-QPLPSIVDFTRLLTATANLRRYETVIYFSQKM---ELYGISHDLYS 108

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           F ++I   CR   +  A+ +  +M     EP I T+ +L+ G C  NR+ +A  L+  M 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  V +N LI+GLCKNGEL  A +L++ M  KG   + VTYNTL+ GLC  G   
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A  +L  M+     P+ VT+  +I+  VK G   +   +   M +     N   Y+++I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +GL   G+  DA K +  M  KGC PN V Y+ LI G C+    DE  ++   M   G  
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
           A+ FTY++L+ G+ + GK   A++I+  M       + + + +L+HGLC +G++  A + 
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILLN 552
           +  M        +VAY+ MIHGLC A  VE+A +LF    C  P    +PD  TY I++ 
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF----CRLPVEGVKPDARTYTIMIL 464

Query: 553 ALCKQSNISHSIDLLNSMMDRG 574
            LCK      + +L+  M + G
Sbjct: 465 GLCKNGPRREADELIRRMKEEG 486



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 183/357 (51%), Gaps = 2/357 (0%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L  G     R ++A  L  EM      P+ V F  L+                  M L G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              +  ++  LIH  C    L  A+S+L +M+     P+ VT+G++++G   + R  D  
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +++ M +  +  N  +Y+TLI GL K G+   A++L  +M +KG   + V Y+ L+ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+  +A  +L +M+      +  T+++L+  F + G   +A E++K+M +++   N 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ +I+GLC  G+L +A+  +  M S+GC P+VV Y+++I G C    V+E +KLF  
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           M C       D+FTYN L++  C+   +  ++D+   M+ R   PD++T  I L  L
Sbjct: 342 MSC--EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 159/316 (50%), Gaps = 3/316 (0%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V  +N++++ + + G  + ALE  N +   +   +  + +T+N ++  +C  G   +A +
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEM---EKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           + R+M  R+  PD+ T+  L+D   K+  LDEA  L  EM      P  VT+N +INGLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
            +G L  A K  D M  KGC PN VTYNTLI G C    +D+ + L  RM       +  
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T+I+G  ++G+      +   M  R+   +   +  L+ GL   G+ E A+  +  M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            E       V Y+ +I GLC+  K ++A E+   +   G   +A TY+ ++ G  ++G  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 454 HKAVEIWKDMAKNNCV 469
            +A E+ + M +   +
Sbjct: 473 READELIRRMKEEGII 488



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 125/283 (44%), Gaps = 25/283 (8%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L +G     + EDA  L+ +M+     P+ V ++ L+     + + +       +M   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
            + + ++++ L+  F    +   A+ +   M K     + V +  L+HG C   ++ +A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILL 551
            +   M+  G +P+VV Y+++I GLC  G +  AL+L NEM   E K    DV TYN LL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM---EKKGLGADVVTYNTLL 218

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
             LC     S +  +L  MM R  +PD+VT     TAL +     Q   D   EL     
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVT----FTALIDVF-VKQGNLDEAQEL----- 268

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                       + M+Q  + P   T+  ++  LC   R+  A
Sbjct: 269 -----------YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 206/389 (52%), Gaps = 8/389 (2%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T TFN++++ +C  G    A++L R+MP     P+  TY T++ G C   R+  A+ ++ 
Sbjct: 114 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 252 EM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLCL 309
           EM +  G  P   T+  +I+G CK G +  A K+ D M  KG + P  V YN LI G C 
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G LD A+   DRMV         TY  +++ L   GR  +   ++  M  +    + + 
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI+G  KEG  + A+++++ M  +G +   V Y+ALI  L + G+  E +++  E +
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +   Y++L+     SG   +A EI  +M K     ++V Y+ L+ GLC  G++ 
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 409

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EAR +  +M  RG +PD+V Y+++I G    G V++AL++ NEM+       P + TYN 
Sbjct: 410 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM--NKGFNPTLLTYNA 467

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           L+  LCK      + +++  M++ G  PD
Sbjct: 468 LIQGLCKNGQGDDAENMVKEMVENGITPD 496



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 205/421 (48%), Gaps = 13/421 (3%)

Query: 141 FHTMVDEFHCKRTV--KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           F    D F  +  +   +FN +L  +   G   RALE    +         PN +T+N V
Sbjct: 99  FALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-------PNAVTYNTV 151

Query: 199 IKTVCRLGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           I   C  G V  A+ + REM  R    P+ YTY T++ G CK  R+DEAV + DEM   G
Sbjct: 152 IAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKG 211

Query: 258 -CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P  V +N LI G C  G+L  A    D M  +G      TYN L+H L + G   +A
Sbjct: 212 EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEA 271

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             L++ M      P+  TY  +ING  K G       +  +M  R        Y+ LI  
Sbjct: 272 YELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYA 331

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L K+G+ ++  KL+ + + +G +P+ V+Y+ALI+     G  D A EI+ EM     A +
Sbjct: 332 LSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPD 391

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY++LM+G    G+  +A ++  +M +     + V Y+ LI G    G +++A  +  
Sbjct: 392 DVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRN 451

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M+++G  P ++ Y+++I GLC  G  ++A  +  EM  +E    PD  TY  L+  L  
Sbjct: 452 EMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM--VENGITPDDSTYISLIEGLTT 509

Query: 557 Q 557
           +
Sbjct: 510 E 510



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 199/387 (51%), Gaps = 29/387 (7%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TFN+++  LC  G+  RA +L+  M      PN VTYNT+I G C +G +  A+ ++  
Sbjct: 115 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 170

Query: 323 MVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSMEER-KFHVNEYIYSTLISGLFKE 380
           M     + PN+ TYGT+I+G  K+GR  +  +V   M  + +      +Y+ LI G   +
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK + A+    +M+E+G       Y+ L+  L   G+  EA E++ EM   G A + FTY
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+ G  + G   KA+EI+++M++       V Y+ LI+ L + G+++E   ++ + + 
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           RG +PD+V Y+++I+    +G+++ A ++  EM   + +  PD  TYN L+  LC    +
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME--KKRIAPDDVTYNTLMRGLCLLGRV 408

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  L++ M +RG  PDLVT N  ++    K        D  + L IR           
Sbjct: 409 DEARKLIDEMTERGIQPDLVTYNTLISGYSMK-------GDVKDALRIR----------- 450

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCR 647
                M+ K  +P   T+  ++Q LC+
Sbjct: 451 ---NEMMNKGFNPTLLTYNALIQGLCK 474



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 190/364 (52%), Gaps = 4/364 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ ++I  + + G  ++   ++  MR    +   + ++  +   + K   V+EA+++F  
Sbjct: 147 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 206

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ +   K     +N+++     +G    AL + + +V      +     T+NL++  + 
Sbjct: 207 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV---ERGVAMTVATYNLLVHALF 263

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G    A +L  EM  +   PD++TY  L++G CKE  + +A+ + + M   G   T V
Sbjct: 264 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 323

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  LI  L K G++    KL D    +G  P+ V YN LI+     GN+D+A  ++  M
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              +  P++VTY T++ GL  LGR  +  +++  M ER    +   Y+TLISG   +G  
Sbjct: 384 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 443

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +DA+++  +MM KG  P  + Y+ALI GLC+ G+ D+AE ++ EM+ NG   +  TY SL
Sbjct: 444 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 503

Query: 444 MKGF 447
           ++G 
Sbjct: 504 IEGL 507



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 153/303 (50%), Gaps = 26/303 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ ++  L   GK   A++L +QM     +PN V Y+ +I G C  G+   A +I+ EM 
Sbjct: 117 FNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 172

Query: 430 N-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE-VCYSVLIHGLCEDGK 487
              G A N +TY +++ G+ + G+  +AV+++ +M     V  E V Y+ LI G C+ GK
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 232

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           L  A +   +M+ RG    V  Y+ ++H L   G   EA +L  EM        PDVFTY
Sbjct: 233 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG--KGLAPDVFTY 290

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           NIL+N  CK+ N+  ++++  +M  RG    +VT    + AL +K +  +  TD L + A
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE--TDKLFDEA 348

Query: 608 IR------------LFKRQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           +R            L     TSG     F+I+  M +K ++P   T+  +++ LC   R+
Sbjct: 349 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 408

Query: 652 QAA 654
             A
Sbjct: 409 DEA 411



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 27/218 (12%)

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ +++    +GK  +A+E+ + M + N V     Y+ +I G C  G+++ A  +  +M
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 171

Query: 499 LSRG-CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
             RG   P+   Y ++I G C  G V+EA+K+F+EML  + + +P+   YN L+   C Q
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKPEAVMYNALIGGYCDQ 230

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
             +  ++   + M++RG    + T N+ + AL                     F   R +
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHAL---------------------FMDGRGT 269

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             +++VE M  K L+P   T+  ++   C+   ++ A+
Sbjct: 270 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 307



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 47/232 (20%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  +   G+ K    +   M R        ++  +  A  K   V+E  +LF   
Sbjct: 289 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 348

Query: 145 VDEFHCKRTVKS----FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           V     +R ++     +N+++N     G   RA E    +   +   I P+ +T+N +++
Sbjct: 349 V-----RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM---EKKRIAPDDVTYNTLMR 400

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM-------------------------- 234
            +C LG VD A +L  EM  R  +PD+ TY TL+                          
Sbjct: 401 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 460

Query: 235 ---------DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
                     GLCK  + D+A  ++ EM  +G  P   T+  LI GL    E
Sbjct: 461 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 512


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 228/451 (50%), Gaps = 44/451 (9%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF-HTMVD 146
           +LI+ +   G  K+   ++  +     V+   S+  +  AY K+  +EEA+R+  HT V 
Sbjct: 109 ALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSVA 168

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
                    ++++VL  +   G   +A++  +  + +K     P+ +T  ++I   C+  
Sbjct: 169 P-----NAATYDAVLCSLCDRGKLKQAMQVLDRQLQSK---CYPDVVTCTVLIDATCKES 220

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL---------------- 250
            V  A++LF EM  + C+PD+ TY  L+ G CKE RLDEA++ L                
Sbjct: 221 GVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHN 280

Query: 251 -------------DEMQV------DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
                        D M++       GCFP+ VTFN+LIN LC+ G LG+A  +++ M   
Sbjct: 281 MILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKH 340

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  PN  ++N LI G C +  +D+A+  L+ MV+  C P+ VTY  ++  L K G+  D 
Sbjct: 341 GHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDA 400

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +L  +  +    +   Y+T+I GL K GKAE A++L ++M  KG KP+ +  ++++ G
Sbjct: 401 VVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGG 460

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L R GK  EA +    +   G   NAF Y+S+M G  ++ +   A++   DM  N C   
Sbjct: 461 LSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPT 520

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           E  Y+ LI G+  +G   EA  +  ++ SRG
Sbjct: 521 EASYTTLIKGITYEGLAEEASKLSNELYSRG 551



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 146/516 (28%), Positives = 246/516 (47%), Gaps = 51/516 (9%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
           +GN +  + FS    N      S    +S  + L +   N G+ +     L  M  + ++
Sbjct: 45  KGNLQHSERFSKGALNGVNT--SLNFEESEIHHLCRLIRN-GELEEGSRFLEYMTNKGKI 101

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
               +   + + + K    + A R+   +++E        S+N ++N   + G    AL 
Sbjct: 102 PDVVACTALIREFCKIGRTKNATRIM-GILEESGAVIDANSYNVLINAYCKSGEIEEALR 160

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
             +H       ++ PN  T++ V+ ++C  G +  A+Q+        C PD+ T   L+D
Sbjct: 161 VLDHT------SVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLID 214

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL----------------- 278
             CKE+ + +A+ L +EM+  GC P  VT+NVLI G CK G L                 
Sbjct: 215 ATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQS 274

Query: 279 ---------------GR---AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
                          GR   A KL+  M  KGC P+ VT+N LI+ LC KG L KA+++L
Sbjct: 275 DVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVL 334

Query: 321 DRMVASKCMPNEVTYGTIINGLVK---LGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           + M      PN  ++  +I G      + RA++   +++S   R  + +   Y+ L++ L
Sbjct: 335 EMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVS---RGCYPDIVTYNILLTAL 391

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K+GK +DA+ +  Q+  KGC P+ + Y+ +IDGL +VGK + A E+L EM   G   + 
Sbjct: 392 CKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDL 451

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            T +S++ G    GK H+A++ +  +       N   Y+ ++ GLC+  +   A      
Sbjct: 452 ITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVD 511

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           M++ GCKP   +Y+++I G+   G  EEA KL NE+
Sbjct: 512 MVANGCKPTEASYTTLIKGITYEGLAEEASKLSNEL 547



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 201/384 (52%), Gaps = 5/384 (1%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++N++I   C+ G ++ A+++     V    P+  TY  ++  LC   +L +A+ +LD  
Sbjct: 141 SYNVLINAYCKSGEIEEALRVLDHTSV---APNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
               C+P  VT  VLI+  CK   +G+A KL + M  KGC P+ VTYN LI G C +G L
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A+  L ++ +  C  + +++  I+  L   GR +D  ++L +M  +    +   ++ L
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+ L ++G    A+ + + M + G  PN+  ++ LI G C     D A E L  M++ GC
Sbjct: 318 INFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGC 377

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY+ L+    + GK   AV I   ++   C  + + Y+ +I GL + GK   A  
Sbjct: 378 YPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVE 437

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  +M  +G KPD++  +S++ GL   G V EA+K F+ +     K  P+ F YN ++  
Sbjct: 438 LLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIK--PNAFIYNSIMMG 495

Query: 554 LCKQSNISHSIDLLNSMMDRGCDP 577
           LCK    S +ID L  M+  GC P
Sbjct: 496 LCKAQQTSLAIDFLVDMVANGCKP 519



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 214/460 (46%), Gaps = 64/460 (13%)

Query: 199 IKTVCRL---GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           I  +CRL   G ++   +    M  +   PD+     L+   CK  R   A  ++  ++ 
Sbjct: 73  IHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE 132

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G      ++NVLIN  CK+GE+  A +++D+  +    PN  TY+ ++  LC +G L +
Sbjct: 133 SGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSVA---PNAATYDAVLCSLCDRGKLKQ 189

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+ +LDR + SKC P+ VT                                    + LI 
Sbjct: 190 AMQVLDRQLQSKCYPDVVTC-----------------------------------TVLID 214

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              KE     AMKL+ +M  KGCKP+ V Y+ LI G C+ G+ DEA   L ++ + GC +
Sbjct: 215 ATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQS 274

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  +++ +++     G+   A+++   M +  C  + V +++LI+ LC+ G L +A  V 
Sbjct: 275 DVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVL 334

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M   G  P+  +++ +I G CN   ++ A++    M+       PD+ TYNILL ALC
Sbjct: 335 EMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMV--SRGCYPDIVTYNILLTALC 392

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           K   +  ++ +L+ +  +GC P L++ N  +  L +  +A         ELA+ L     
Sbjct: 393 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA---------ELAVEL----- 438

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  +E M  K L P   T   VV  L R  ++  AI
Sbjct: 439 -------LEEMCYKGLKPDLITCTSVVGGLSREGKVHEAI 471



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 128/266 (48%), Gaps = 24/266 (9%)

Query: 409 IDGLCRV---GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           I  LCR+   G+ +E    L  M N G   +    ++L++ F + G+   A  I   + +
Sbjct: 73  IHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEE 132

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
           +  V +   Y+VLI+  C+ G++ EA  V          P+   Y +++  LC+ G +++
Sbjct: 133 SGAVIDANSYNVLINAYCKSGEIEEALRVLDHT---SVAPNAATYDAVLCSLCDRGKLKQ 189

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A+++ +  L  + K  PDV T  +L++A CK+S +  ++ L N M  +GC PD+VT N+ 
Sbjct: 190 AMQVLDRQL--QSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVL 247

Query: 586 LTA------LKEKL----EAPQDGTDFLNELAIRLFKRQRTSGG-----FKIVEVMLQKF 630
           +        L E +    + P  G    + ++  +  R   SGG      K++  ML+K 
Sbjct: 248 IKGFCKEGRLDEAIIFLKKLPSYGCQS-DVISHNMILRSLCSGGRWMDAMKLLATMLRKG 306

Query: 631 LSPQTSTWERVVQELCRPKRIQAAIN 656
             P   T+  ++  LC+   +  A+N
Sbjct: 307 CFPSVVTFNILINFLCQKGLLGKALN 332


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/405 (31%), Positives = 214/405 (52%), Gaps = 2/405 (0%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
           H   LP+ + F  ++     L   +  I   ++M +     D+Y++  L+   C+ +RL 
Sbjct: 64  HSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLS 123

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            A+ +L +M   G  P+ VTF  L++G C    +G A  LV  M   G  PN V YNTLI
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLC  G L+ A+ LL+ M       + VTY T++ GL   GR  D AR+L  M +R  +
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   ++ LI    K+G  ++A +L+K+M++    PN V Y+++I+GLC  G+  +A++ 
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              M + GC  N  TY++L+ GF +     + +++++ M+      +   Y+ LIHG C+
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            GKLR A  ++  M+SR   PD++ +  ++HGLC  G +E AL  F++M   E +    +
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR--ESEKYIGI 421

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             YNI+++ LCK   +  + +L   +   G  PD  T  I +  L
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466



 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 216/404 (53%), Gaps = 2/404 (0%)

Query: 189  LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            +P+ + F  V+  + ++   D  I L+ +M       D+Y++  L+   C+ +RL  A+ 
Sbjct: 601  IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 660

Query: 249  LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
            LL +M   G  P+ VT   L+NG C+      A  LVD+M   G +PN V YNT+I+GLC
Sbjct: 661  LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 720

Query: 309  LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
               +L+ A+ +   M       + VTY T+I+GL   GR  D AR+L  M +RK   N  
Sbjct: 721  KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 780

Query: 369  IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
             ++ LI    KEG   +A  L+K+M+ +   PN   Y++LI+G C  G   +A+ +   M
Sbjct: 781  FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 840

Query: 429  INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            ++ GC  +  TY++L+ GF +S +    ++++ +M     V +   Y+ LIHG C+ GKL
Sbjct: 841  VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 900

Query: 489  REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
              A+ V+ +M+  G  PD+V Y+ ++  LCN G +E+AL +  ++   + +   D+ TYN
Sbjct: 901  NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL--QKSEMDVDIITYN 958

Query: 549  ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            I++  LC+   +  +  L  S+  +G  PD +     ++ L  K
Sbjct: 959  IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 1002



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/442 (31%), Positives = 218/442 (49%), Gaps = 10/442 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A  LF  MV       ++  F  +L        Y   + F   +   +   I  +  +
Sbjct: 53  EDAFALFFEMVHS-QPLPSIVDFTRLLTATANLRRYETVIYFSQKM---ELYGISHDLYS 108

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           F ++I   CR   +  A+ +  +M     EP I T+ +L+ G C  NR+ +A  L+  M 
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  V +N LI+GLCKNGEL  A +L++ M  KG   + VTYNTL+ GLC  G   
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A  +L  M+     P+ VT+  +I+  VK G   +   +   M +     N   Y+++I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +GL   G+  DA K +  M  KGC PN V Y+ LI G C+    DE  ++   M   G  
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
           A+ FTY++L+ G+ + GK   A++I+  M       + + + +L+HGLC +G++  A + 
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILLN 552
           +  M        +VAY+ MIHGLC A  VE+A +LF    C  P    +PD  TY I++ 
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF----CRLPVEGVKPDARTYTIMIL 464

Query: 553 ALCKQSNISHSIDLLNSMMDRG 574
            LCK      + +L+  M + G
Sbjct: 465 GLCKNGPRREADELIRRMKEEG 486



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 212/425 (49%), Gaps = 5/425 (1%)

Query: 153  TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
            ++  F  VL VI +   +   +  Y+ + N   + I  +  +F ++I   CR   +  A+
Sbjct: 603  SIVDFTRVLTVIAKMNKFDIVIYLYHKMEN---LGISHDLYSFTILIHCFCRCSRLSLAL 659

Query: 213  QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
             L  +M      P I T  +L++G C+ NR  EAV L+D M   G  P  V +N +INGL
Sbjct: 660  ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 719

Query: 273  CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            CKN +L  A ++   M  KG   + VTYNTLI GL   G    A  LL  MV  K  PN 
Sbjct: 720  CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 779

Query: 333  VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            + +  +I+  VK G  ++   +   M  R    N + Y++LI+G    G   DA  ++  
Sbjct: 780  IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 839

Query: 393  MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
            M+ KGC P+ V Y+ LI G C+  + ++  ++  EM   G   +AFTY++L+ G+ ++GK
Sbjct: 840  MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899

Query: 453  GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             + A +++  M       + V Y++L+  LC +GK+ +A ++   +       D++ Y+ 
Sbjct: 900  LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 959

Query: 513  MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
            +I GLC    ++EA  LF  +       +PD   Y  +++ LC++     +  L   M +
Sbjct: 960  IIQGLCRTDKLKEAWCLFRSL--TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 1017

Query: 573  RGCDP 577
             G  P
Sbjct: 1018 DGFMP 1022



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 191/381 (50%), Gaps = 2/381 (0%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D+A  LF EM      P I  +  ++  + K N+ D  + L  +M+  G      +F +L
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 645

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+  C+   L  A  L+  M   G  P+ VT  +L++G C      +AVSL+D M     
Sbjct: 646 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 705

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
           +PN V Y T+INGL K     +   V   ME++    +   Y+TLISGL   G+  DA +
Sbjct: 706 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 765

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L + M+++   PN + ++ALID   + G   EA  +  EMI      N FTY+SL+ GF 
Sbjct: 766 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 825

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             G    A  ++  M    C  + V Y+ LI G C+  ++ +   ++ +M  +G   D  
Sbjct: 826 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 885

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+++IHG C AG +  A K+FN M  ++    PD+ TYNILL+ LC    I  ++ ++ 
Sbjct: 886 TYNTLIHGYCQAGKLNVAQKVFNRM--VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 569 SMMDRGCDPDLVTCNIFLTAL 589
            +     D D++T NI +  L
Sbjct: 944 DLQKSEMDVDIITYNIIIQGL 964



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 183/383 (47%), Gaps = 38/383 (9%)

Query: 151  KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
            + ++ +  S+LN   Q   +  A+   + +        +PN + +N VI  +C+   ++N
Sbjct: 671  RPSIVTLGSLLNGFCQGNRFQEAVSLVDSM---DGFGFVPNVVIYNTVINGLCKNRDLNN 727

Query: 211  AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
            A+++F  M  +    D  TY TL+ GL    R  +A  LL +M      P  + F  LI+
Sbjct: 728  ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALID 787

Query: 271  GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
               K G L  A  L   M  +  +PN  TYN+LI+G C+ G L  A  + D MV+  C P
Sbjct: 788  TFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 847

Query: 331  NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
            + VTY T+I G  K  R  DG ++   M  +    + + Y+TLI G  + GK   A K++
Sbjct: 848  DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 907

Query: 391  KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             +M++ G  P+ V Y+ L+D LC                NNG                  
Sbjct: 908  NRMVDCGVSPDIVTYNILLDCLC----------------NNG------------------ 933

Query: 451  GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
             K  KA+ + +D+ K+    + + Y+++I GLC   KL+EA  ++  +  +G KPD +AY
Sbjct: 934  -KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAY 992

Query: 511  SSMIHGLCNAGSVEEALKLFNEM 533
             +MI GLC  G   EA KL   M
Sbjct: 993  ITMISGLCRKGLQREADKLCRRM 1015



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 183/357 (51%), Gaps = 2/357 (0%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L  G     R ++A  L  EM      P+ V F  L+                  M L G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
              +  ++  LIH  C    L  A+S+L +M+     P+ VT+G++++G   + R  D  
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +++ M +  +  N  +Y+TLI GL K G+   A++L  +M +KG   + V Y+ L+ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+  +A  +L +M+      +  T+++L+  F + G   +A E++K+M +++   N 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ +I+GLC  G+L +A+  +  M S+GC P+VV Y+++I G C    V+E +KLF  
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           M C       D+FTYN L++  C+   +  ++D+   M+ R   PD++T  I L  L
Sbjct: 342 MSC--EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 211/430 (49%), Gaps = 17/430 (3%)

Query: 242  RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            + D+A  L  EM      P+ V F  ++  + K  +      L   M   G   +  ++ 
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 302  TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
             LIH  C    L  A++LL +M+     P+ VT G+++NG  +  R  +   ++ SM+  
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 362  KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
             F  N  IY+T+I+GL K     +A++++  M +KG + + V Y+ LI GL   G+  +A
Sbjct: 704  GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 422  EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
              +L +M+      N   +++L+  F + G   +A  ++K+M + + V N   Y+ LI+G
Sbjct: 764  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 482  LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
             C  G L +A+ ++  M+S+GC PDVV Y+++I G C +  VE+ +KLF EM        
Sbjct: 824  FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM--TYQGLV 881

Query: 542  PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL------------ 589
             D FTYN L++  C+   ++ +  + N M+D G  PD+VT NI L  L            
Sbjct: 882  GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVM 941

Query: 590  KEKLEAPQDGTDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
             E L+  +   D +  N +   L +  +    + +   + +K + P    +  ++  LCR
Sbjct: 942  VEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCR 1001

Query: 648  PKRIQAAINK 657
             K +Q   +K
Sbjct: 1002 -KGLQREADK 1010



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 164/318 (51%), Gaps = 9/318 (2%)

Query: 139  RLFHTMVDEFHC--KRTVK----SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
            R  +  ++ F+C  K+ ++    ++N++++ +   G +  A      +V  K   I PN 
Sbjct: 723  RDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK---IDPNV 779

Query: 193  LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
            + F  +I T  + G +  A  L++EM  R+  P+++TY +L++G C    L +A  + D 
Sbjct: 780  IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 839

Query: 253  MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
            M   GCFP  VT+N LI G CK+  +    KL   M  +G + +  TYNTLIHG C  G 
Sbjct: 840  MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 899

Query: 313  LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
            L+ A  + +RMV     P+ VTY  +++ L   G+      ++  +++ +  V+   Y+ 
Sbjct: 900  LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 959

Query: 373  LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
            +I GL +  K ++A  L++ +  KG KP+ + Y  +I GLCR G   EA+++   M  +G
Sbjct: 960  IIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 1019

Query: 433  CAANAFTYSSLMKGFFES 450
               +   Y   ++  + S
Sbjct: 1020 FMPSERIYDETLRDHYTS 1037



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 159/316 (50%), Gaps = 3/316 (0%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V  +N++++ + + G  + ALE  N +   +   +  + +T+N ++  +C  G   +A +
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEM---EKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           + R+M  R+  PD+ T+  L+D   K+  LDEA  L  EM      P  VT+N +INGLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
            +G L  A K  D M  KGC PN VTYNTLI G C    +D+ + L  RM       +  
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T+I+G  ++G+      +   M  R+   +   +  L+ GL   G+ E A+  +  M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            E       V Y+ +I GLC+  K ++A E+   +   G   +A TY+ ++ G  ++G  
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472

Query: 454 HKAVEIWKDMAKNNCV 469
            +A E+ + M +   +
Sbjct: 473 READELIRRMKEEGII 488



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 147/303 (48%), Gaps = 10/303 (3%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF---IFKAYGKAHLVEEAIRLF 141
            T+ +LI   +NSG +     +L  M + K   ++ + IF   +   + K   + EA  L+
Sbjct: 746  TYNTLISGLSNSGRWTDAARLLRDMVKRK---IDPNVIFFTALIDTFVKEGNLLEARNLY 802

Query: 142  HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
              M+        V ++NS++N     G    A   ++ +V+       P+ +T+N +I  
Sbjct: 803  KEMIRR-SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK---GCFPDVVTYNTLITG 858

Query: 202  VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             C+   V++ ++LF EM  +    D +TY TL+ G C+  +L+ A  + + M   G  P 
Sbjct: 859  FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 918

Query: 262  PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             VT+N+L++ LC NG++ +A  +V+++       + +TYN +I GLC    L +A  L  
Sbjct: 919  IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 978

Query: 322  RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             +      P+ + Y T+I+GL + G   +  ++   M+E  F  +E IY   +   +   
Sbjct: 979  SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSL 1038

Query: 382  KAE 384
             AE
Sbjct: 1039 SAE 1041



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 125/283 (44%), Gaps = 25/283 (8%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L +G     + EDA  L+ +M+     P+ V ++ L+     + + +       +M   G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
            + + ++++ L+  F    +   A+ +   M K     + V +  L+HG C   ++ +A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILL 551
            +   M+  G +P+VV Y+++I GLC  G +  AL+L NEM   E K    DV TYN LL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM---EKKGLGADVVTYNTLL 218

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
             LC     S +  +L  MM R  +PD+VT     TAL +     Q   D   EL     
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVT----FTALIDVF-VKQGNLDEAQEL----- 268

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                       + M+Q  + P   T+  ++  LC   R+  A
Sbjct: 269 -----------YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/409 (32%), Positives = 217/409 (53%), Gaps = 13/409 (3%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           Y    S+F  ++    ++  FK+ E ++ RM+ E  VV E   + I + YG+ H   +++
Sbjct: 47  YVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSL 106

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           R+FH M D F C  + K++ +VL ++++E   + A +FY    N + + + P   + N++
Sbjct: 107 RVFHKMKD-FDCDPSQKAYVTVLAILVEENQLNLAFKFYK---NMREIGLPPTVASLNVL 162

Query: 199 IKTVCR-LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           IK +CR  G VD  +++F EMP R C+PD YTY TL+ GLC+  R+DEA  L  EM    
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C PT VT+  LINGLC +  +  A + ++ M  KG  PN  TY++L+ GLC  G   +A+
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAM 282

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            L + M+A  C PN VTY T+I GL K  +  +   +L  M  +    +  +Y  +ISG 
Sbjct: 283 ELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGF 342

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVY-------SALIDGLCRVGKPDEAEEILFEMIN 430
               K  +A     +M+  G  PN + +       + ++ GLC    P  A  +   M +
Sbjct: 343 CAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRS 401

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            G +    T  SL+K   + G+  KAV++  ++  + C+ ++  + +LI
Sbjct: 402 RGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/374 (31%), Positives = 191/374 (51%), Gaps = 17/374 (4%)

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +++++F +M   +C+P    Y T++  L +EN+L+ A      M+  G  PT  + NVLI
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163

Query: 270 NGLCKN-GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
             LC+N G +    K+   M  +GC P+  TY TLI GLC  G +D+A  L   MV   C
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P  VTY ++INGL       +  R L  M+ +    N + YS+L+ GL K+G++  AM+
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L++ MM +GC+PN V Y+ LI GLC+  K  EA E+L  M   G   +A  Y  ++ GF 
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSV-------LIHGLCEDGKLREARMVWTQMLSR 501
              K  +A     +M       N + +++       ++ GLC +   R A  ++  M SR
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSR-AFTLYLSMRSR 402

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQS 558
           G   +V    S++  LC  G  ++A++L +E++   C+  K      T+ +L+     ++
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKG-----TWKLLIGHTLDKT 457

Query: 559 NISHSIDLLNSMMD 572
            +  + D L   +D
Sbjct: 458 IVGEASDTLLRDLD 471



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 187/384 (48%), Gaps = 24/384 (6%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM--FLK--- 291
           L   N+   A  L+  M+++ C    V+ ++L++ +C+    GR  +  D++  F K   
Sbjct: 61  LVSANKFKAAEDLIVRMKIENCV---VSEDILLS-ICRG--YGRVHRPFDSLRVFHKMKD 114

Query: 292 -GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
             C P++  Y T++  L  +  L+ A      M      P   +   +I  L +    VD
Sbjct: 115 FDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVD 174

Query: 351 -GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
            G ++ + M +R    + Y Y TLISGL + G+ ++A KL+ +M+EK C P  V Y++LI
Sbjct: 175 AGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           +GLC     DEA   L EM + G   N FTYSSLM G  + G+  +A+E+++ M    C 
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 294

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N V Y+ LI GLC++ K++EA  +  +M  +G KPD   Y  +I G C      EA   
Sbjct: 295 PNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANF 354

Query: 530 FNEMLCLEPKSQPDVFTYNI-------LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
            +EM+       P+  T+NI       ++  LC     S +  L  SM  RG   ++ T 
Sbjct: 355 LDEMIL--GGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETL 411

Query: 583 NIFLTALKEKLEAPQDGTDFLNEL 606
              +  L +K E  Q     ++E+
Sbjct: 412 ESLVKCLCKKGEF-QKAVQLVDEI 434



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 135/298 (45%), Gaps = 29/298 (9%)

Query: 364 HVNEYI-----YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           + N Y+     +  ++  L    K + A  L  +M  + C  +  +  ++  G  RV +P
Sbjct: 43  YANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRP 102

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            ++  +  +M +  C  +   Y +++    E  + + A + +K+M +          +VL
Sbjct: 103 FDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVL 162

Query: 479 IHGLCE-DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           I  LC  DG +     ++ +M  RGC PD   Y ++I GLC  G ++EA KLF EM  +E
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM--VE 220

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               P V TY  L+N LC   N+  ++  L  M  +G +P++ T +  +           
Sbjct: 221 KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLM----------- 269

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           DG          L K  R+    ++ E+M+ +   P   T+  ++  LC+ ++IQ A+
Sbjct: 270 DG----------LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 14/206 (6%)

Query: 85  TFYSLIQHYANSG-DFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ SL+      G   +++E+    M R  R  +  ++  +     K   ++EA+ L   
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM-VTYTTLITGLCKEQKIQEAVELLDR 322

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT-- 201
           M +    K     +  V++       +  A  F + ++      I PN LT+N+ +KT  
Sbjct: 323 M-NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG---GITPNRLTWNIHVKTSN 378

Query: 202 -VCRLGLVDN----AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            V R GL  N    A  L+  M  R    ++ T  +L+  LCK+    +AV L+DE+  D
Sbjct: 379 EVVR-GLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTD 437

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAA 282
           GC P+  T+ +LI        +G A+
Sbjct: 438 GCIPSKGTWKLLIGHTLDKTIVGEAS 463


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/456 (30%), Positives = 228/456 (50%), Gaps = 6/456 (1%)

Query: 134  VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
            VEE ++L         C   V  +N +++   + G   R L     +   +    LP  +
Sbjct: 1163 VEEGLKLIEARWGA-GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEM---ETKGFLPTLV 1218

Query: 194  TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            T+  +I  + + G ++    LF EM  R   P++  Y +++D LCK     +A+++L +M
Sbjct: 1219 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM 1278

Query: 254  QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
               GC P  +TFN LI GLC  G + +A   +     +   PN+++Y  LIHG C++G L
Sbjct: 1279 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1338

Query: 314  DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
              A  LL  M+     P+ VT+G +I+GLV  G+  +   V   M ER+   +  IY+ L
Sbjct: 1339 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1398

Query: 374  ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
            ISGL K+     A  + ++M+EK  +P+  VY+ LIDG  R     +A +I   M + G 
Sbjct: 1399 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGI 1458

Query: 434  AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
              +  + ++++KG+ + G   +A+    +M K  C+ +E  Y+ +I G  + G L  A  
Sbjct: 1459 CPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 1518

Query: 494  VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
                M+ R CKP+VV YSS+I+G C  G  + A  LF  M        P+V TY IL+ +
Sbjct: 1519 WLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQA--EALSPNVVTYTILIGS 1576

Query: 554  LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            L K+  +  +     +M+   C P+ VT +  +  L
Sbjct: 1577 LFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1612



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/414 (29%), Positives = 212/414 (51%), Gaps = 2/414 (0%)

Query: 189  LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            +P+ + +N++I   CR G +   + L  EM  +   P + TY +L++ L K+  L++   
Sbjct: 1179 IPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGS 1238

Query: 249  LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
            L  EM+  G  P    +N +I+ LCK     +A  ++  MF  GC P+ +T+NTLI GLC
Sbjct: 1239 LFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLC 1298

Query: 309  LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             +G++ KA   L   +  +  PN+++Y  +I+G    G  +  + +L+ M  R    +  
Sbjct: 1299 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVV 1358

Query: 369  IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
             +  LI GL   GK  +A+ + ++M E+   P+  +Y+ LI GLC+      A+ IL EM
Sbjct: 1359 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEM 1418

Query: 429  INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            +      + F Y++L+ GF  S     A +I++ M       + V  + +I G C+ G +
Sbjct: 1419 LEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMM 1478

Query: 489  REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             EA +  + M   GC PD   Y+++I G    G++  AL+   +M  ++ K +P+V TY+
Sbjct: 1479 SEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDM--IKRKCKPNVVTYS 1536

Query: 549  ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
             L+N  CK  +   +  L  +M      P++VT  I + +L +K +  + G  F
Sbjct: 1537 SLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYF 1590



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 222/486 (45%), Gaps = 56/486 (11%)

Query: 153  TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
            T+ ++ S++N + ++G   +    +   +  +     PN   +N VI  +C+      A+
Sbjct: 1216 TLVTYGSLINWLGKKGDLEKIGSLF---LEMRKRGFSPNVQIYNSVIDALCKCRSATQAM 1272

Query: 213  QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
             + ++M    C+PDI T+ TL+ GLC E  + +A   L E       P  +++  LI+G 
Sbjct: 1273 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1332

Query: 273  CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            C  GEL  A+ L+  M  +G  P+ VT+  LIHGL + G + +A+ + ++M   +  P+ 
Sbjct: 1333 CMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDV 1392

Query: 333  VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
              Y  +I+GL K         +L  M E+    +E++Y+TLI G  +     DA K+++ 
Sbjct: 1393 NIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 1452

Query: 393  MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
            M  KG  P+ V  +A+I G C+ G   EA   +  M   GC  + FTY++++ G+ + G 
Sbjct: 1453 MEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1512

Query: 453  GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             + A+    DM K  C  N V YS LI+G C+ G    A  ++  M +    P+VV Y+ 
Sbjct: 1513 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTI 1572

Query: 513  MIHGL-----------------------------------------------CNAGSV-- 523
            +I  L                                               CN   V  
Sbjct: 1573 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 1632

Query: 524  EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            ++AL +  + L  +    P    YN ++ +LC+ + +  ++D  N M  +G  P+ +T  
Sbjct: 1633 KDALLVVFKKLVFD-IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT-- 1689

Query: 584  IFLTAL 589
             FL+ L
Sbjct: 1690 -FLSLL 1694



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 206/451 (45%), Gaps = 64/451 (14%)

Query: 250  LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVT--------- 299
            L  M + G  PT      L+      G LG+A K+ + +  + G LP EVT         
Sbjct: 1064 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLP-EVTHCNRLLKLL 1122

Query: 300  -------------------------YNT--LIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
                                     Y+T  L+ GLCL+  +++ + L++    + C+P+ 
Sbjct: 1123 VEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHV 1182

Query: 333  VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            V Y  +I+G  + G    G  +L  ME + F      Y +LI+ L K+G  E    L+ +
Sbjct: 1183 VFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLE 1242

Query: 393  MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
            M ++G  PN  +Y+++ID LC+     +A  IL +M  +GC  +  T+++L+ G    G 
Sbjct: 1243 MRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGH 1302

Query: 453  GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              KA    ++  +     N++ Y+ LIHG C  G+L  A  +  +M+ RG  PDVV + +
Sbjct: 1303 VRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGA 1362

Query: 513  MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
            +IHGL  AG V EAL +  +M   E +  PDV  YN+L++ LCK+  +  + ++L  M++
Sbjct: 1363 LIHGLVVAGKVSEALIVREKM--TERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLE 1420

Query: 573  RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG-GFKIVEVMLQKFL 631
            +   PD                      +F+    I  F R    G   KI E M  K +
Sbjct: 1421 KNVQPD----------------------EFVYATLIDGFIRSENLGDARKIFEFMEHKGI 1458

Query: 632  SPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
             P   +   +++  C+   +  AI  C SN+
Sbjct: 1459 CPDIVSCNAMIKGYCQFGMMSEAI-LCMSNM 1488



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 126/477 (26%), Positives = 210/477 (44%), Gaps = 32/477 (6%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            TF +LI    + G  +  E  L    R +    + S+  +   +     +  A  L   M
Sbjct: 1289 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1348

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK--HMNILPNTLTFNLVIKTV 202
            +   H    V +F ++++ ++  G    AL     IV  K     + P+   +N++I  +
Sbjct: 1349 MGRGHTPDVV-TFGALIHGLVVAGKVSEAL-----IVREKMTERQVFPDVNIYNVLISGL 1402

Query: 203  CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            C+  ++  A  +  EM  +N +PD + Y TL+DG  +   L +A  + + M+  G  P  
Sbjct: 1403 CKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDI 1462

Query: 263  VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            V+ N +I G C+ G +  A   + NM   GC+P+E TY T+I G   +GNL+ A+  L  
Sbjct: 1463 VSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCD 1522

Query: 323  MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
            M+  KC PN VTY ++ING  K G       +  +M+      N   Y+ LI  LFK+ K
Sbjct: 1523 MIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDK 1582

Query: 383  AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
               A   ++ M+   C PN V    L++GL               +IN+ C   +  +  
Sbjct: 1583 VLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPC---------VINSICCNTSEVH-- 1631

Query: 443  LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
                    GK    V ++K +  +        Y+ +I  LC    LREA     +M  +G
Sbjct: 1632 --------GKDALLV-VFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKG 1682

Query: 503  CKPDVVAYSSMIHGLCNAG-SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
              P+ + + S+++G C+ G SV     L NE    + +    +F Y  L +    +S
Sbjct: 1683 YVPNPITFLSLLYGFCSVGKSVNWRTILPNE---FQQEEFEIIFRYKFLFDQYATES 1736



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 98/233 (42%), Gaps = 30/233 (12%)

Query: 419  DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY-SV 477
            D  ++ L  M   G A       +L+  + ++G   KA ++ + + +      EV + + 
Sbjct: 1058 DAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNR 1117

Query: 478  LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--- 534
            L+  L E  +  +AR ++ +ML +    D  +   ++ GLC    VEE LKL        
Sbjct: 1118 LLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAG 1177

Query: 535  CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            C+     P V  YN+L++  C++ ++   + LL  M  +G  P LVT    +  L +K +
Sbjct: 1178 CI-----PHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGD 1232

Query: 595  APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
              + G+ FL                      M ++  SP    +  V+  LC+
Sbjct: 1233 LEKIGSLFLE---------------------MRKRGFSPNVQIYNSVIDALCK 1264


>gi|449468277|ref|XP_004151848.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g14770, mitochondrial-like, partial [Cucumis
           sativus]
          Length = 697

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 150/503 (29%), Positives = 251/503 (49%), Gaps = 21/503 (4%)

Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP 225
           Q GL   AL  Y  +V +    I P+ +TF  ++  +C+ G +     L REM       
Sbjct: 2   QNGL-EEALTLYEEMVGS---GIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNL 57

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           +  +Y  L+D L K  ++ EA++ L  M V G     +   VLI+GL K+G++  A  L 
Sbjct: 58  NNVSYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLF 117

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
            N++    +PN +TY+ LI G C  G+++ A S L  M    C+PN +TY ++ING VK 
Sbjct: 118 CNLYQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQ 177

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           G   D  +VL  M  +    N   Y+ L+ G FK G  + A+ L+ +M + G K N  + 
Sbjct: 178 GLLHDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFIL 237

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
            A ++ + R G+ +EAEE++ +M + G   +   Y++LM GF +SGK   A+ + ++M  
Sbjct: 238 DAFVNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTS 297

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
            N V++ V ++VLI+ L + GK  +   +++ M   G  PD+  Y++M++G    G+   
Sbjct: 298 KNVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTS 356

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           AL+L+NEM     K  P+  T NI++N LC+   + ++ID+L  M+  G  P   T  I 
Sbjct: 357 ALELWNEM--KSRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRIL 414

Query: 586 LTALKEKLEAP--------------QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
           L    +   A               +   D  N L   L K   T     +++ M ++ +
Sbjct: 415 LNISSKSRRADTILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGI 474

Query: 632 SPQTSTWERVVQELCRPKRIQAA 654
              T+T+  ++   C    ++ A
Sbjct: 475 IADTTTYNALIHGYCISSHLKRA 497



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 238/516 (46%), Gaps = 7/516 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI      GD    E  L+ M  +  V    ++  +   Y K  L+ +A ++   M
Sbjct: 131 TYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKM 190

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V + +    + ++  +L+   + G    AL+ Y+ +   K   +  N    +  +  + R
Sbjct: 191 VHK-NAMPNICTYAILLDGSFKAGWQDIALDLYSKM---KQGGLKDNVFILDAFVNNMKR 246

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A +L  +M     +PD+  Y  LMDG  K  ++  A+ L  EM         VT
Sbjct: 247 SGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVT 306

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FNVLIN L K G+      +   M   G  P+  TYNT+++G   KGN   A+ L + M 
Sbjct: 307 FNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMK 365

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           + K +PN +T   +INGL + GR  +   +L  M     +     Y  L++   K  +A+
Sbjct: 366 SRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRAD 425

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
             ++  + ++    K +  VY+ LI  LC++G   +A  +L +M   G  A+  TY++L+
Sbjct: 426 TILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALI 485

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+  S    +A   +  M       +   Y++L+ GL + G + EA  + +++  RG  
Sbjct: 486 HGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLV 545

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P+   Y +++ G C   + +E L+++ EM+      +P    YN+L+    K   +  + 
Sbjct: 546 PNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPRA--YNMLIGYFSKMGKMKQAK 603

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           +L+N M  +G  P   T +I +      L+ P  G+
Sbjct: 604 ELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGS 639



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 183/418 (43%), Gaps = 60/418 (14%)

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           +NG L  A  L + M   G  P+ VT+ ++++GLC  G L +   LL  M       N V
Sbjct: 2   QNG-LEEALTLYEEMVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNV 60

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           +Y  +++ L K G+  +    L  M  R  + +    + LI GLFK G+ ++A  L+  +
Sbjct: 61  SYTILLDALFKAGKVAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNL 120

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            +    PN + YSALIDG C++G  + AE  L EM    C  N  TYSSL+ G+ + G  
Sbjct: 121 YQLNLVPNYITYSALIDGRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLL 180

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHG-------------------------------- 481
           H A ++ + M   N + N   Y++L+ G                                
Sbjct: 181 HDAFKVLRKMVHKNAMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAF 240

Query: 482 ---LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
              +   G++ EA  +  +M S G KPD+V Y++++ G   +G V  AL L  EM     
Sbjct: 241 VNNMKRSGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMT--SK 298

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
               D+ T+N+L+N L K    S +  + ++M + G  PDL T N  L            
Sbjct: 299 NVVFDIVTFNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGN--------- 348

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                       FK+   +   ++   M  + L P   T   ++  LC   R++ AI+
Sbjct: 349 ------------FKKGNWTSALELWNEMKSRKLIPNAITCNIMINGLCEAGRMENAID 394


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/470 (30%), Positives = 232/470 (49%), Gaps = 9/470 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTM-VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
           +  ++ KA  +++A+ L   M      C     ++N V+N + ++G   +A +    +V+
Sbjct: 235 LLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQ----LVD 290

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
              ++   +  T+N +I  +     V+ A  L  EM      P + TY TL+DGL K   
Sbjct: 291 IMRLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGN 350

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            + A +  DEM+  G  P  +T+N LING CK G L +A  L  ++   G  P  +TYN 
Sbjct: 351 AEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNI 410

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEER 361
           LI G C  G+L+ A  L + M    C+P+  TY  ++NG   + R +   R+    M  +
Sbjct: 411 LIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMV-RNLAMVRIFFDEMLSK 469

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               + + Y+T IS     G   +A +L ++MM +G   +TV Y+ LIDGLC+ G   +A
Sbjct: 470 GLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDA 529

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +  +M+ +G   +  TY+ L+    E G+  +A  I+  M  +    + V Y++ IH 
Sbjct: 530 YVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHT 589

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C  G L  A   + +ML  G +P+ V Y+ ++H LC  G  E A + F+EML  E    
Sbjct: 590 YCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEML--ERGLV 647

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           P+ +TY +L++  CK+ N  H+I L   M  +G  PD  T N       E
Sbjct: 648 PNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGE 697



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 149/502 (29%), Positives = 236/502 (47%), Gaps = 62/502 (12%)

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           A+H  + P     N V++ +      D+   ++ +M     EP I+TY TL+D  CK  R
Sbjct: 186 ARH-GVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGR 244

Query: 243 LDEAVLLLDEMQ--VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +D+AV LL +M+    GC P  VT+NV+INGL + GEL +AA+LVD M L     +  TY
Sbjct: 245 MDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK-KASAFTY 303

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N LI GL  +  ++KA +LL  M     +P  VTY T+I+GL K G A         M  
Sbjct: 304 NPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRA 363

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    +   Y++LI+G  K G  + A+ L+  +   G  P  + Y+ LIDG CR+G  + 
Sbjct: 364 KGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEG 423

Query: 421 AEEILFEMINNGCAANAFTYSSLMKG------------FFES------------------ 450
           A  +  EM    C  +  TY+ LM G            FF+                   
Sbjct: 424 ARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRIS 483

Query: 451 -----GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
                G    A ++ ++M       + V Y+VLI GLC+ G L++A ++W +M++ G + 
Sbjct: 484 AELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRL 543

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           D V Y+ +IH  C  G + EA  +F+ M+       P V TY I ++  C++ N+  +  
Sbjct: 544 DCVTYTCLIHAHCERGRLIEAKNIFDGMVA--SGLSPSVVTYTIFIHTYCRRGNLYLAYG 601

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
               M++ G +P+ VT N+ + A                     L +  RT   ++    
Sbjct: 602 WFRKMLEEGVEPNEVTYNVLMHA---------------------LCRMGRTESAYQHFHE 640

Query: 626 MLQKFLSPQTSTWERVVQELCR 647
           ML++ L P   T+  ++   C+
Sbjct: 641 MLERGLVPNKYTYTLLIDGSCK 662



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 224/472 (47%), Gaps = 9/472 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           T+ +L+  +  +G       +L  M       L     +  +     +   +E+A +L  
Sbjct: 231 TYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD 290

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M      K +  ++N ++  ++      +A      ++  ++  I+P  +T+N +I  +
Sbjct: 291 IM--RLSKKASAFTYNPLITGLLARDFVEKAGAL---LLEMENEGIVPTVVTYNTLIDGL 345

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            + G  + A   F EM  +   PD+ TY +L++G CK   L +A+ L  +++  G  PT 
Sbjct: 346 FKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTV 405

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +T+N+LI+G C+ G+L  A +L + M  + CLP+  TY  L++G C+  NL       D 
Sbjct: 406 LTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDE 465

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M++    P+   Y T I+  + +G   +  ++   M  R    +   Y+ LI GL K G 
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +DA  LW +M+  G + + V Y+ LI   C  G+  EA+ I   M+ +G + +  TY+ 
Sbjct: 526 LKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTI 585

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
            +  +   G  + A   ++ M +     NEV Y+VL+H LC  G+   A   + +ML RG
Sbjct: 586 FIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERG 645

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             P+   Y+ +I G C  G+   A++L+ EM   +    PD  T+N L    
Sbjct: 646 LVPNKYTYTLLIDGSCKEGNWVHAIRLYCEM--HQKGIHPDHCTHNALFKGF 695



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 217/459 (47%), Gaps = 19/459 (4%)

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           +  F+EM      P +     ++  L    R D+   +  +M   G  P+  T+N L++ 
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 272 LCKNGELGRAAKLVDNMFLK--GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
            CK G + +A  L+ +M  +  GCLPN+VTYN +I+GL  KG L+KA  L+D M  SK  
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK-K 297

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
            +  TY  +I GL+          +L+ ME          Y+TLI GLFK G AE A   
Sbjct: 298 ASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVK 357

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + +M  KG  P+ + Y++LI+G C+ G   +A  +  ++   G      TY+ L+ G+  
Sbjct: 358 FDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCR 417

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G    A  + ++M + +C+ +   Y++L++G C    L   R+ + +MLS+G +PD  A
Sbjct: 418 LGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFA 477

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y++ I      G++  A +L  EM+     S  D  TYN+L++ LCK  ++  +  L   
Sbjct: 478 YNTRISAELTIGAITNAFQLREEMMLRGISS--DTVTYNVLIDGLCKTGSLKDAYVLWMK 535

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF--------------KRQR 615
           M+  G   D VT    + A  E+    +    F   +A  L               +R  
Sbjct: 536 MVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGN 595

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               +     ML++ + P   T+  ++  LCR  R ++A
Sbjct: 596 LYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESA 634



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 196/437 (44%), Gaps = 9/437 (2%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRL 140
           D T+  +I   A  G+ +    ++  MR  K+     +F +  +         VE+A  L
Sbjct: 266 DVTYNVVINGLARKGELEKAAQLVDIMRLSKKA---SAFTYNPLITGLLARDFVEKAGAL 322

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
              M +E     TV ++N++++ + + G    A   ++ +   +   +LP+ +T+N +I 
Sbjct: 323 LLEMENE-GIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEM---RAKGLLPDLITYNSLIN 378

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C+ G +  A+ LF ++      P + TY  L+DG C+   L+ A  L +EM  + C P
Sbjct: 379 GYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLP 438

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T+ +L+NG C    L       D M  KG  P+   YNT I      G +  A  L 
Sbjct: 439 DVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLR 498

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + M+      + VTY  +I+GL K G   D   + M M      ++   Y+ LI    + 
Sbjct: 499 EEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCER 558

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+  +A  ++  M+  G  P+ V Y+  I   CR G    A     +M+  G   N  TY
Sbjct: 559 GRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTY 618

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + LM      G+   A + + +M +   V N+  Y++LI G C++G    A  ++ +M  
Sbjct: 619 NVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQ 678

Query: 501 RGCKPDVVAYSSMIHGL 517
           +G  PD   ++++  G 
Sbjct: 679 KGIHPDHCTHNALFKGF 695



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/216 (20%), Positives = 92/216 (42%), Gaps = 17/216 (7%)

Query: 455 KAVEIWKDMAKNNCV-YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           + +  +++MA++    + + C  VL   L +  +  + R V++ ML  G +P +  Y+++
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVL-RVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTL 235

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           +   C AG +++A+ L  +M        P+  TYN+++N L ++  +  +  L++ +M  
Sbjct: 236 LDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD-IMRL 294

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFL--------------NELAIRLFKRQRTSGG 619
                  T N  +T L  +    + G   L              N L   LFK       
Sbjct: 295 SKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAA 354

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
               + M  K L P   T+  ++   C+   ++ A+
Sbjct: 355 QVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQAL 390


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 210/392 (53%), Gaps = 5/392 (1%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I P  +TF  +I+ +C L   + A+Q+F +M     +PD + Y  ++  LCK N+L
Sbjct: 6   KAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKL 65

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A    ++M   GC P  VT+ VL++ L K  +  +  ++ + M  KG  P  VTY T+
Sbjct: 66  DLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATV 125

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           ++G C  G +D+A+SL+ R+  +   P+   Y T+I+GL K  R  + AR L  M     
Sbjct: 126 VNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRH-EEARELFEMAAGDV 184

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +  +Y++ ISGL K GK ++A  +  +M+E GC P+ V Y+ +I  LC+  +  EA+E
Sbjct: 185 Q-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKE 243

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK-NNCVYNEVCYSVLIHGL 482
           ++ + +   C       + L+ G  +S +  +A  I + M +  +   + V YS +I GL
Sbjct: 244 LMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGL 303

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C+  +L +A +V  +M   GC PDVV Y+++I   C  G ++EA +LF  M   E     
Sbjct: 304 CKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRM--HERGCAS 361

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           DV  YNIL+   C+ + +  +I ++  M  RG
Sbjct: 362 DVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 393



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 194/374 (51%), Gaps = 5/374 (1%)

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L  EM      P I T+ +L+  LC+ N  ++A+ +  +M      P    + V+I  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K  +L  AA   + M   GCLP++VTY  L+H L      ++   + + M++    P  V
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T++NG  K GR      ++  ++      +  +YSTLI GL K  + E+A +L++  
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE-- 178

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           M  G   + +VY++ I GLC+ GK DEA+ +  +MI  GCA +  +Y+ ++    +  + 
Sbjct: 179 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK-PDVVAYSS 512
            +A E+     +  C+      +VL+ GLC+  ++ EA ++  +ML  G + P VV YS+
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I GLC A  +++A  +  +M        PDV TY  +++A CK   +  + +L   M +
Sbjct: 299 VIDGLCKADRLDDAYIVLQKM--RRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHE 356

Query: 573 RGCDPDLVTCNIFL 586
           RGC  D+V  NI +
Sbjct: 357 RGCASDVVAYNILI 370



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 177/341 (51%), Gaps = 3/341 (0%)

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LL EM+  G  PT VTF  LI  LC+     +A ++   M      P+   Y  +I  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
               LD A S  ++MV S C+P++VTY  +++ L K  +   G ++   M  +       
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+T+++G  K G+ + A+ L +++   G  P+  +YS LIDGLC+  + +EA E LFEM
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARE-LFEM 179

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G   +   Y+S + G  ++GK  +A  +   M +  C  + V Y+V+I+ LC+D ++
Sbjct: 180 -AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EA+ +  Q + R C P V   + ++ GLC +  VEEA  +   ML    ++ P V TY+
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRA-PSVVTYS 297

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +++ LCK   +  +  +L  M   GC PD+VT    + A 
Sbjct: 298 AVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAF 338



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 174/351 (49%), Gaps = 19/351 (5%)

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           LL  M A+   P  VT+G++I  L +L       ++   M + K   + ++Y+ +I  L 
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K  K + A   ++QM++ GC P+ V Y+ L+  L +  K ++  +I  EM++ G +    
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TY++++ G+ ++G+  +A+ + + +       +   YS LI GLC+  +  EAR ++   
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE-- 178

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           ++ G   DV+ Y+S I GLC AG ++EA  +  +M+  E    PD  +YN+++ +LCK +
Sbjct: 179 MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMI--EAGCAPDPVSYNVIIYSLCKDN 236

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTA-------------LKEKLEAPQDGTDFLNE 605
            +S + +L++  M+R C P +  C + +               L+  LEA       +  
Sbjct: 237 RVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTY 296

Query: 606 LAI--RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            A+   L K  R    + +++ M +    P   T+  ++   C+  R+  A
Sbjct: 297 SAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEA 347



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 23/160 (14%)

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M + G  P +V + S+I  LC      +AL++F++M+  + K +PD F Y +++  LCK
Sbjct: 4   EMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMI--DMKVKPDAFLYTVVIGHLCK 61

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
            + +  +      M+  GC PD VT  + + +L                     FK  + 
Sbjct: 62  INKLDLAASYFEQMVQSGCLPDKVTYTVLVHSL---------------------FKACKW 100

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             G +I E ML K  SP+  T+  VV   C+  RI  A++
Sbjct: 101 EQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALS 140


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 151/516 (29%), Positives = 264/516 (51%), Gaps = 12/516 (2%)

Query: 84  STFYSLIQHYANSGDFKSLEMVL---YRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           + F + +++   SG  KS++  L   + M +   +     F  +     K      AI L
Sbjct: 38  TQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISL 97

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF-YNHIVNAKHMNILPNTLTFNLVI 199
               V E H    +K    +LNV+I    + + + F ++ +     + + P+ +TF ++I
Sbjct: 98  ----VKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILI 153

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C  G V  A++L   +       D+ TY  L++GLCK  +  EAV  L +M+     
Sbjct: 154 NGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWN 213

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  V ++ +++GLCK+G +  A  L   M  KG  PN VTY  LI GLC  G   +A SL
Sbjct: 214 PNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSL 273

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           LD M+    MP+  +   +++ L K G+ +    V+  M       + + Y++LI     
Sbjct: 274 LDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCL 333

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           + + ++A ++++ M+ +GC P+ V Y++LI G C++   ++A  +L EMI  G   +  T
Sbjct: 334 QNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVT 393

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           +++L+ GF + G+   A E++ +M K   V N    ++++ GLC+   L EA  ++  M 
Sbjct: 394 WTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAME 453

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQS 558
                 ++V YS ++ G+C+AG +  AL+LF+   CL  K  Q +V+ Y I++N   KQ 
Sbjct: 454 KSNLDLNIVIYSIILDGMCSAGKLNTALELFS---CLPAKGLQINVYAYTIMINGFAKQG 510

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            +  + DLL++M + GC PD  T N+F+  L  + E
Sbjct: 511 LLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAERE 546



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 232/457 (50%), Gaps = 6/457 (1%)

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           LV     +  TM+ +   + +V +F  ++N +  +G   RA+E  +H+    + +   + 
Sbjct: 126 LVAFGFSVLGTML-KLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRS---DV 181

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
            T+ ++I  +C++G    A+   R+M  RN  P++  Y T+MDGLCK+  + EA+ L  E
Sbjct: 182 KTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLE 241

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   G  P  VT+  LI GLC  G    A  L+D M   G +P+  + N L+  LC +G 
Sbjct: 242 MSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGK 301

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           + +A S++  M+    +P+  TY ++I+      +  +  RV   M  R    +   Y++
Sbjct: 302 IMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTS 361

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI G  K      AM L  +M++ G  P+ V ++ LI G C+VG+P  A+E+   M   G
Sbjct: 362 LIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYG 421

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  T + ++ G  +S    +A+ ++  M K+N   N V YS+++ G+C  GKL  A 
Sbjct: 422 QVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTAL 481

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +++ + ++G + +V AY+ MI+G    G +++A  L + M   E    PD  TYN+ + 
Sbjct: 482 ELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNM--EENGCMPDSCTYNVFVQ 539

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            L  +  I+ SI  L  M D+G   D  T  + +  L
Sbjct: 540 GLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 127/308 (41%), Gaps = 38/308 (12%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           ++S N +++V+ +EG   +A      ++       +P+  T+N +I   C    +D A +
Sbjct: 286 LQSLNILVDVLCKEGKIMQAKSVIGFMILVGE---VPDVFTYNSLIDRYCLQNQMDEATR 342

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI---- 269
           +F  M  R C PDI  Y +L+ G CK   +++A+ LLDEM   G  P  VT+  LI    
Sbjct: 343 VFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFC 402

Query: 270 -------------------------------NGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
                                          +GLCK+  L  A  L   M       N V
Sbjct: 403 QVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIV 462

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y+ ++ G+C  G L+ A+ L   + A     N   Y  +ING  K G       +L +M
Sbjct: 463 IYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNM 522

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           EE     +   Y+  + GL  E +   ++K    M +KG   +      +I+ L      
Sbjct: 523 EENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQGD 582

Query: 419 DEAEEILF 426
           +E  E LF
Sbjct: 583 NELREFLF 590



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 39/223 (17%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +   G   + + +   M +  +V   ++   I     K+ L+ EA+ LFH M
Sbjct: 393 TWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAM 452

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                     +  N  LN++I                             +++++  +C 
Sbjct: 453 ----------EKSNLDLNIVI-----------------------------YSIILDGMCS 473

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A++LF  +P +  + ++Y Y  +++G  K+  LD+A  LL  M+ +GC P   T
Sbjct: 474 AGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCT 533

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           +NV + GL    E+ R+ K +  M  KG   +  T   +I+ L
Sbjct: 534 YNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 48/228 (21%), Positives = 97/228 (42%), Gaps = 27/228 (11%)

Query: 435 ANAFTYSSLMKGFFESGK---GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           +N   + + M+   +SGK     +A+  +  MAK N + + + +++L+  + +      A
Sbjct: 35  SNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTA 94

Query: 492 RMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
             +  +M S  G KPD    + +I+ LC+   V     +   ML L    +P V T+ IL
Sbjct: 95  ISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKL--GLEPSVVTFTIL 152

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           +N LC + ++  +++L++ +   G   D+ T  + +  L                     
Sbjct: 153 INGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGL--------------------- 191

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
            K  +TS     +  M ++  +P    +  V+  LC+   +  A+  C
Sbjct: 192 CKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLC 239


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/520 (28%), Positives = 251/520 (48%), Gaps = 50/520 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++A+ LF+ ++   +       FN +L  +++   YH  L     +   +   I PN +
Sbjct: 66  VDDAVSLFNRLLRR-NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM---EFRGIKPNLV 121

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
             N++I   C+LGL+  A  +F ++      PD  T+ TL  GLC + ++ +A L  D++
Sbjct: 122 NCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKV 181

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G     +++  LI+GLCK GE   A  L+  +      PN V YNT+I  +C    +
Sbjct: 182 VALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLV 241

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           ++A  L   MV+    P+ VTY  +I+G   LG+  D   +   M       + Y ++ L
Sbjct: 242 NEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNIL 301

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ++   K+GK ++   ++  MM++G KPN V Y++L+DG C V + ++A+ I   M   G 
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  +YS ++ GF +  K  +A+ ++K+M + N + + V YS LI GL + G++  A  
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 494 VWTQMLSRG---------------CK--------------------PDVVAYSSMIHGLC 518
           +  QM  RG               CK                    PD+  YS +I GLC
Sbjct: 422 LVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLC 481

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
            +G +E+A K+F ++L        DV+ Y I++   C +   + ++ LL+ M D GC PD
Sbjct: 482 QSGKLEDARKVFEDLLV--KGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
             T  I + +L +K E         N++A +L +     G
Sbjct: 540 AKTYEIIILSLFKKDE---------NDMAEKLLREMIARG 570



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/476 (28%), Positives = 233/476 (48%), Gaps = 29/476 (6%)

Query: 185 HMNILP------NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
           H N +P      N ++++    T      VD+A+ LF  +  RN  P  + +  ++  L 
Sbjct: 37  HFNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLV 96

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K       + L  +M+  G  P  V  N+LIN  C+ G +  A  +   +   G +P+ +
Sbjct: 97  KSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTI 156

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T+ TL  GLCLKG + +A    D++VA     ++++YGT+I+GL K+G       +L  +
Sbjct: 157 TFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           +      N  +Y+T+I  + K     +A  L+ +M+ KG  P+ V YSALI G C +GK 
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL 276

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            +A ++  +MI      + +T++ L+  F + GK  +   ++  M K     N V Y+ L
Sbjct: 277 KDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSL 336

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           + G C   ++ +A+ ++  M   G  PD+ +YS MI+G C     +EA+ LF EM     
Sbjct: 337 MDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH--RK 394

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PDV TY+ L++ L K   IS+++ L++ M DRG  P++ T N  L AL +  +  + 
Sbjct: 395 NIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDK- 453

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   AI L  + +  G              P  ST+  +++ LC+  +++ A
Sbjct: 454 --------AIALLTKFKDKG------------FQPDISTYSILIKGLCQSGKLEDA 489



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 210/441 (47%), Gaps = 23/441 (5%)

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           F  +P  + + +  +Y +        N +D+AV L + +      P    FN ++  L K
Sbjct: 38  FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
           +        L   M  +G  PN V  N LI+  C  G +  A S+  +++    +P+ +T
Sbjct: 98  SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT 157

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           + T+  GL   G+          +    FH ++  Y TLI GL K G+   A+ L +++ 
Sbjct: 158 FTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
               +PN V+Y+ +ID +C+V   +EA ++  EM++ G + +  TYS+L+ GF   GK  
Sbjct: 218 GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLK 277

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A++++  M   N   +   +++L++  C+DGK++E + V+  M+ +G KP+ V Y+S++
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G C    V +A  +FN M   +    PD+ +Y+I++N  CK      +++L   M  + 
Sbjct: 338 DGYCLVKEVNKAKSIFNTM--AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             PD+VT +  +  L                      K  R S   ++V+ M  + + P 
Sbjct: 396 IIPDVVTYSSLIDGLS---------------------KSGRISYALQLVDQMHDRGVPPN 434

Query: 635 TSTWERVVQELCRPKRIQAAI 655
             T+  ++  LC+  ++  AI
Sbjct: 435 ICTYNSILDALCKTHQVDKAI 455



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 161/305 (52%), Gaps = 4/305 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +++AI LF+ M+ E + K  V +FN ++N   ++G        ++ ++      I PN +
Sbjct: 276 LKDAIDLFNKMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQ---GIKPNFV 331

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N ++   C +  V+ A  +F  M      PDI +Y  +++G CK  + DEA+ L  EM
Sbjct: 332 TYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  VT++ LI+GL K+G +  A +LVD M  +G  PN  TYN+++  LC    +
Sbjct: 392 HRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQV 451

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           DKA++LL +       P+  TY  +I GL + G+  D  +V   +  + ++++ Y Y+ +
Sbjct: 452 DKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIM 511

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I G   EG   +A+ L  +M + GC P+   Y  +I  L +  + D AE++L EMI  G 
Sbjct: 512 IQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571

Query: 434 AANAF 438
             N +
Sbjct: 572 PLNFY 576



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/361 (25%), Positives = 173/361 (47%), Gaps = 23/361 (6%)

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N ++Y++         ++D AVSL +R++     P    +  I+  LVK         + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             ME R    N    + LI+   + G    A  ++ ++++ G  P+T+ ++ L  GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G+  +A     +++  G   +  +Y +L+ G  + G+   A+++ + +  N    N V Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + +I  +C+   + EA  ++++M+S+G  PDVV YS++I G C  G +++A+ LFN+M+ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
              K  PDV+T+NIL+NA CK   +     + + MM +G  P+ VT N  +         
Sbjct: 289 ENIK--PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM--------- 337

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             DG   + E+          +    I   M Q  ++P   ++  ++   C+ K+   A+
Sbjct: 338 --DGYCLVKEV----------NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385

Query: 656 N 656
           N
Sbjct: 386 N 386


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 263/522 (50%), Gaps = 9/522 (1%)

Query: 67  DEIFNSTPKLGSYQLGDSTFY--SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           +E F+   KLG   +  + F   +LI     +  F   + +   M        E ++  +
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             A  K  ++E+A+ LF  M D+   K TV  +NS++N   ++G   RA    + +V   
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDK-GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE- 437

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              + P   +++ +I  +CR G + + ++L REM  R    + YT+  L++G CK+ ++D
Sbjct: 438 --GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L D+M      P  VTFNV+I G C  G + +A +L D M   G  P+  TY +LI
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLCL   + KA   +  +  S  + N  +   ++ G  + GR  +   +   M  R   
Sbjct: 556 SGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVK 615

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           ++   ++ ++    K+   E +  L+++M E+G KP+ + Y+ +ID L +     +A   
Sbjct: 616 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 675

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             +M+ +G + N  T++ L+    +SG    A  + K+M   N + N+  Y+  +     
Sbjct: 676 WDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT 735

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +G + +A+ + + ML +G    +V+++ +I GLC AG ++EA+ L +++   E    PD 
Sbjct: 736 EGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT--ESGFSPDC 792

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            +Y+ +++ LCK  +I+ + +L N M+ +G  PD+V  NIF+
Sbjct: 793 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 235/490 (47%), Gaps = 16/490 (3%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + ++PN   +N +I  +C+    D+A +LF+EM  R  EP+  TY  L+  LCK   +++
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ L D+M+  G   T   +N LING CK G L RA  L+  M  +G  P   +Y+ LI 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  G+L   + L   M       N  T+  +ING  K  +  + AR+   M +     
Sbjct: 452 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           NE  ++ +I G    G    A +L+ QM+E G KP+   Y +LI GLC      +A E +
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            ++ N+    N F+ ++L+ GFF  G+  +   +W +MA      + V ++++++   + 
Sbjct: 572 ADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 631

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
               ++ +++ +M  +G KPD + Y+ MI  L    ++ +AL  +++M+       P+  
Sbjct: 632 HDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVV--DGYSPNTV 689

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQDGTDFL 603
           T+ +L+N LCK   +  +  L   M+     P+  T N FL   A +  +E  +D    +
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 604 -----------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                      N L   L K  +      ++  + +   SP   ++  ++ ELC+   I 
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 653 AAINKCWSNL 662
            A  + W+ +
Sbjct: 810 KAF-ELWNEM 818



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 156/591 (26%), Positives = 268/591 (45%), Gaps = 21/591 (3%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
            L +  + + I+ Y  S +      ++ RM  E        +  +     K   V+EA+ 
Sbjct: 195 HLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE 254

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           + + MV+       V     V      E L   AL   + ++    +  +P+    + +I
Sbjct: 255 VKNVMVNIGVTADEVTYRTLVYGFCRMEEL-EMALRITHDMI---RLGFVPSEANCSFMI 310

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             + +  LV+ A  L  ++      P+++ Y  L+D LCK  R D+A  L  EM   G  
Sbjct: 311 DELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLE 370

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+ +LI+ LCK G +  A  L D M  KG       YN+LI+G C +G+LD+A  L
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  MV     P   +Y  +I GL + G       +   M ER    N Y ++ LI+G  K
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           + K ++A +L+ +M++    PN V ++ +I+G C VG   +A ++  +M+  G   + +T
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y SL+ G   +    KA E   D+  +  V N    + L++G   +G+  E   +W +M 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 610

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            RG K D+V+++ +++        E++  LF EM   E   +PD   Y  +++AL K+ N
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM--KEQGVKPDDIFYTCMIDALSKEEN 668

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-------------KEKLEAPQDGTDFLNEL 606
           +  +++  + M+  G  P+ VT  + +  L             KE L        F    
Sbjct: 669 MIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC 728

Query: 607 AIRLFKRQRTSGGFK-IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +  F  +      K +   MLQ  L+   S +  +++ LC+  +IQ AI+
Sbjct: 729 FLDYFATEGDMEKAKDLHSAMLQGHLASIVS-FNILIKGLCKAGKIQEAID 778



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 200/421 (47%), Gaps = 41/421 (9%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I  N  T + ++ ++ ++     A  LF +M       D Y Y   +   C+   LD A 
Sbjct: 159 ITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 218

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+  M+ +G   + V +NVL+ GLCKN  +  A ++ + M   G   +EVTY TL++G 
Sbjct: 219 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF 278

Query: 308 CLKGNLDKAVSLLDRMV-------ASKC----------------------------MPNE 332
           C    L+ A+ +   M+        + C                            +PN 
Sbjct: 279 CRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 338

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y  +I+ L K  R  D  R+   M  R    NE  Y+ LI  L K G  EDA+ L+ +
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 398

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M +KG K     Y++LI+G C+ G  D A  +L  M+  G    A +YS L+ G   +G 
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 458

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
               +E+ ++MA+    +N   ++ LI+G C+D K+ EA  ++ +M+     P+ V ++ 
Sbjct: 459 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 518

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS----IDLLN 568
           MI G C  G++ +A +L+++M  +E   +PD +TY  L++ LC  S +S +     DL N
Sbjct: 519 MIEGYCLVGNIRKAFQLYDQM--VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 576

Query: 569 S 569
           S
Sbjct: 577 S 577



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 185/427 (43%), Gaps = 23/427 (5%)

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
           YT   ++  L K  +   A  L D+M   G       +   I   C++  L  A  LV  
Sbjct: 164 YTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 223

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  +G   + V YN L++GLC    + +AV + + MV      +EVTY T++ G  ++  
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                R+   M    F  +E   S +I  L K+   E+A  L  ++ + G  PN   Y+A
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LID LC+  + D+A+ +  EM   G   N  TY+ L+    + G    A+ ++  M    
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
                  Y+ LI+G C+ G L  AR + + M+  G  P   +YS +I GLC  G +   +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           +L  EM   E     + +T+  L+N  CK   +  +  L + M+D    P+ VT N+ + 
Sbjct: 464 ELHREM--AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI- 520

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                     +G   +  +             F++ + M++  L P   T+  ++  LC 
Sbjct: 521 ----------EGYCLVGNI----------RKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 648 PKRIQAA 654
              +  A
Sbjct: 561 TSGVSKA 567



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 34/306 (11%)

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           VN+Y  S ++  L K  +   A  L+ +M++ G   +  VY+A I   C     D A  +
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           +  M + G  A+A  Y+ LM G  ++ +  +AVE+   M       +EV Y  L++G C 
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             +L  A  +   M+  G  P     S MI  L     VEEA  L  ++  L     P+V
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL--GMVPNV 338

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
           F YN L++ LCK      +  L   M  RG +P+ VT  I + AL ++          + 
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR---------GMI 389

Query: 605 ELAIRLFKRQRTSG-------------GF----------KIVEVMLQKFLSPQTSTWERV 641
           E A+ LF + R  G             G+           ++  M+++ L+P  +++  +
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 642 VQELCR 647
           +  LCR
Sbjct: 450 IAGLCR 455



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 38/257 (14%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  I  A  K H  E++  LF  M ++   K     +  +++ + +E    +AL  ++ 
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQ-GVKPDDIFYTCMIDALSKEENMIQALNCWDQ 678

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD---- 235
           +V   +    PNT+T  ++I  +C+ G + +A  L +EM   N  P+ +TY   +D    
Sbjct: 679 MVVDGYS---PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT 735

Query: 236 ------------------------------GLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
                                         GLCK  ++ EA+ L+ ++   G  P  +++
Sbjct: 736 EGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISY 795

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           + +I+ LCK G++ +A +L + M  KG  P+ V YN  I    + G  DKA+ +   M+ 
Sbjct: 796 STIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 855

Query: 326 SKCMPNEVTYGTIINGL 342
           S   PN  TY  +++G+
Sbjct: 856 SGVQPNWDTYRALLSGI 872



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 4/159 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N  L+    EG   +A + ++ ++       L + ++FN++IK +C+ G +  AI L 
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAMLQGH----LASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            ++      PD  +Y T++  LCK   +++A  L +EM   G  P  V +N+ I     +
Sbjct: 781 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVH 840

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           GE  +A  +  NM   G  PN  TY  L+ G+ L  + D
Sbjct: 841 GESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 237/492 (48%), Gaps = 14/492 (2%)

Query: 96  SGDFKSLEMVLYRMRREKRVVLEK---SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKR 152
            GD +    +L  M RE          S+  + +    +   +EA+ L  +M      + 
Sbjct: 90  GGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSM-QASGVRA 148

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
            V ++ +++  +        ALE    +  +    + PN + ++ +++  CR G   +  
Sbjct: 149 DVVTYGTLIRGLCDAAELDGALELLGEMCGS---GVHPNVIVYSCLLRGYCRSGRWQDVS 205

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           ++F EM     EPD+  +   +D LCK+ R+ +AV + D M   G  P  VT+NVLIN L
Sbjct: 206 KVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCL 265

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM--P 330
           CK G +  A  L + M  KG  P+ VTYNTLI GL     +D A+ LL+ M+    +  P
Sbjct: 266 CKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEP 325

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + VT+ ++I+GL K+GR      V   M ER    N   Y+ LI G  +  K   AM L 
Sbjct: 326 DVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLM 385

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            +++  G +P++  YS LI+G  ++ + D AE  L  M   G  A  F Y  L+    + 
Sbjct: 386 SELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQL 445

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G   +A+ ++ +M   NC  + V YS +++G C+ G ++ A+ +   ML  G  PD V Y
Sbjct: 446 GMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTY 504

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           S +I+     G +EEA ++  +M        PDV  ++ L+     +  I+  +DL++ M
Sbjct: 505 SILINMFAKLGDLEEAERVLKQMAA--SGFVPDVAVFDSLIKGYSAEGQINKILDLIHEM 562

Query: 571 MDR--GCDPDLV 580
             +    DP  +
Sbjct: 563 RAKNVAIDPKFI 574



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 147/513 (28%), Positives = 244/513 (47%), Gaps = 19/513 (3%)

Query: 102 LEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVL 161
           L ++L R R +   +L +          +A  V EA  L   + D     R   S+N VL
Sbjct: 36  LAVLLRRGRADAAALLNRRL--------RAAPVTEACSLLSALPD----VRDAVSYNIVL 83

Query: 162 NVIIQEGLYHR-ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
             + + G   R AL     +    H    PN +++ +V++ +C     D A+ L R M  
Sbjct: 84  AALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQA 143

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
                D+ TY TL+ GLC    LD A+ LL EM   G  P  + ++ L+ G C++G    
Sbjct: 144 SGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQD 203

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
            +K+ + M   G  P+ + +   I  LC KG + KAV + D MV     PN VTY  +IN
Sbjct: 204 VSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLIN 263

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG--C 398
            L K G   +   +   M+++    +   Y+TLI+GL    + + AM L ++M++     
Sbjct: 264 CLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLV 323

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
           +P+ V ++++I GLC++G+  +A  +   M   GC  N  TY+ L+ GF    K + A+ 
Sbjct: 324 EPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMN 383

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +  ++  +    +   YS+LI+G  +  ++  A M    M  RG + ++  Y  ++  LC
Sbjct: 384 LMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALC 443

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E+A+ LFNEM   +     D   Y+ ++   CK  +I  +  LL  M+D G  PD
Sbjct: 444 QLGMMEQAMVLFNEM---DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPD 500

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
            VT +I +     KL   ++    L ++A   F
Sbjct: 501 AVTYSILINMFA-KLGDLEEAERVLKQMAASGF 532



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 147/293 (50%), Gaps = 29/293 (9%)

Query: 370 YSTLISGLFKEG-KAEDAMKLWKQMMEKG---CKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           Y+ +++ L + G     A+ L   M  +     +PN V Y+ ++ GLC   + DEA  +L
Sbjct: 79  YNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALL 138

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M  +G  A+  TY +L++G  ++ +   A+E+  +M  +    N + YS L+ G C  
Sbjct: 139 RSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRS 198

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G+ ++   V+ +M   G +PDV+ ++  I  LC  G + +A+K+ + M+  +   +P+V 
Sbjct: 199 GRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMV--QRGLEPNVV 256

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           TYN+L+N LCK+ ++  ++ L N M D+G  PD+VT N  +  L   LE           
Sbjct: 257 TYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLE----------- 305

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQ--KFLSPQTSTWERVVQELCRPKRIQAAIN 656
                       G   ++E M+Q    + P   T+  V+  LC+  R++ AI+
Sbjct: 306 ----------MDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAIS 348



 Score = 89.0 bits (219), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 120/231 (51%), Gaps = 4/231 (1%)

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ E  C   + ++N ++   ++    + A+   + ++++    + P++ T++++I    
Sbjct: 352 MMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISS---GLEPDSFTYSILINGFS 408

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +L  VD A    R M  R    +++ Y  L+  LC+   +++A++L +EM ++ C    V
Sbjct: 409 KLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAV 467

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            ++ ++ G CK+G++  A +L+ +M  +G  P+ VTY+ LI+     G+L++A  +L +M
Sbjct: 468 AYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQM 527

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            AS  +P+   + ++I G    G+      ++  M  +   ++     TL+
Sbjct: 528 AASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLV 578


>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 150/565 (26%), Positives = 276/565 (48%), Gaps = 21/565 (3%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           V+  MR+ K      ++  +  A+   +  +  + LF  M  E   + TV  F +++   
Sbjct: 155 VVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM-QELGYEPTVHLFTTLIRGF 213

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
            +EG    AL   + +   K  ++  + + +N+ I +  ++G VD A + F E+     +
Sbjct: 214 AKEGRVDSALSLLDEM---KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK 270

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           PD  TY +++  LCK NRLDEAV + + ++ +   P    +N +I G    G+   A  L
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           ++    KG +P+ + YN ++  L   G +D+A+ + + M      PN  TY  +I+ L +
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM-KKDAAPNLSTYNILIDMLCR 389

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G+      +  SM++     N    + ++  L K  K ++A  +++QM  K C P+ + 
Sbjct: 390 AGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEIT 449

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           + +LIDGL +VG+ D+A +I  +M+++ C  N+  Y+SL+K FF  G+     +I+KDM 
Sbjct: 450 FCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMV 509

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
             NC  +    +  +  + + G+  + R ++ ++ SR   PD  +YS +IHGL  AG   
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFAN 569

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           E  +LF  M   E     D   YNI+++  CK   ++ +  LL  M  +G +P +VT   
Sbjct: 570 ETYELFYSMK--EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627

Query: 585 FLTALK--EKLEAP----QDGTDFLNELAIRLF--------KRQRTSGGFKIVEVMLQKF 630
            +  L   ++L+      ++      EL + ++        K  R    + I+E ++QK 
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687

Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
           L+P   TW  ++  L + + I  A+
Sbjct: 688 LTPNVYTWNSLLDALVKAEEINEAL 712



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 256/540 (47%), Gaps = 42/540 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F     +L R R +  +    ++  I     K   V+EA+R+F  M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM 369

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      + ++N +++++ + G    A E  + +  A    + PN  T N+++  +C+
Sbjct: 370 KKD--AAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKA---GLFPNVRTVNIMVDRLCK 424

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A  +F +M  + C PD  T+C+L+DGL K  R+D+A  + ++M    C    + 
Sbjct: 425 SQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIV 484

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI     +G      K+  +M  + C P+    NT +  +   G  +K  ++ + + 
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           + + +P+  +Y  +I+GL+K G A +   +  SM+E+   ++   Y+ +I G  K GK  
Sbjct: 545 SRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604

Query: 385 DAMKLWKQMMEKGCKP-----------------------------------NTVVYSALI 409
            A +L ++M  KG +P                                   N V+YS+LI
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  IL E++  G   N +T++SL+    ++ + ++A+  ++ M +  C 
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N+V Y +LI+GLC+  K  +A + W +M  +G KP  ++Y++MI GL  AG++ EA  L
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+          PD   YN ++  L   +    +  L      RG      TC + L  L
Sbjct: 785 FDRFKA--NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCVVLLDTL 842



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 249/538 (46%), Gaps = 22/538 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ S+I     +        +   + + +RV    ++  +   YG A   +EA    +++
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA----YSL 330

Query: 145 VDEFHCKRTVKS---FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           ++    K ++ S   +N +L  + + G    AL  +  +      +  PN  T+N++I  
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM----KKDAAPNLSTYNILIDM 386

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +CR G +D A +L   M      P++ T   ++D LCK  +LDEA  + ++M    C P 
Sbjct: 387 LCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPD 446

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            +TF  LI+GL K G +  A K+ + M    C  N + Y +LI      G  +    +  
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            MV   C P+     T ++ + K G    G  +   ++ R+F  +   YS LI GL K G
Sbjct: 507 DMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAG 566

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
            A +  +L+  M E+GC  +T  Y+ +IDG C+ GK ++A ++L EM   G      TY 
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           S++ G  +  +  +A  ++++        N V YS LI G  + G++ EA ++  +++ +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G  P+V  ++S++  L  A  + EAL  F  M   E K  P+  TY IL+N LCK    +
Sbjct: 687 GLTPNVYTWNSLLDALVKAEEINEALVCFQSM--KELKCTPNQVTYGILINGLCKVRKFN 744

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
            +      M  +G  P  ++    ++ L +     + G          LF R + +GG
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA---------LFDRFKANGG 793



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 204/423 (48%), Gaps = 14/423 (3%)

Query: 85  TFYSLIQHYANSGD----FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           TF SLI      G     +K  E +L    R   +V   S I  F  +G+    E+  ++
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVY-TSLIKNFFNHGRK---EDGHKI 504

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +  MV++ +C   ++  N+ ++ + + G   +    +  I   K    +P+  +++++I 
Sbjct: 505 YKDMVNQ-NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI---KSRRFVPDARSYSILIH 560

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            + + G  +   +LF  M  + C  D   Y  ++DG CK  ++++A  LL+EM+  G  P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           T VT+  +I+GL K   L  A  L +    K    N V Y++LI G    G +D+A  +L
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + ++     PN  T+ ++++ LVK     +      SM+E K   N+  Y  LI+GL K 
Sbjct: 681 EELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            K   A   W++M ++G KP+T+ Y+ +I GL + G   EA  +      NG   ++  Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNC-VYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           +++++G     +   A  ++++  +    ++N+ C  VL+  L ++  L +A +V   + 
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGLHIHNKTCV-VLLDTLHKNDCLEQAAIVGAVLR 859

Query: 500 SRG 502
             G
Sbjct: 860 ETG 862



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 203/465 (43%), Gaps = 72/465 (15%)

Query: 197 LVIKTVCRLGLVDNAIQLFR------EMPVRNCEPDIYTYCTLMDGLCKE-NRLDEAVLL 249
            VI  + RL  V+ AI+ FR      E+P  +C P+ Y    L+   C+  + LD+   +
Sbjct: 67  FVIGVLRRLKDVNRAIEYFRWYERRTELP--HC-PESYNSLLLVMARCRNFDALDQ---I 120

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L EM V G  P+  T   ++    K  +L     +V NM      P    Y TLI     
Sbjct: 121 LGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGAF-- 178

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
                 AV+  D M+                             +   M+E  +    ++
Sbjct: 179 -----SAVNHSDMMLT----------------------------LFQQMQELGYEPTVHL 205

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++TLI G  KEG+ + A+ L  +M       + V+Y+  ID   +VGK D A +   E+ 
Sbjct: 206 FTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIE 265

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            NG   +  TY+S++    ++ +  +AVE+++ + KN  V     Y+ +I G    GK  
Sbjct: 266 ANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFD 325

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  +  +  ++G  P V+AY+ ++  L   G V+EAL++F EM   +  + P++ TYNI
Sbjct: 326 EAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEM---KKDAAPNLSTYNI 382

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L++ LC+   +  + +L +SM   G  P++ T NI +                      R
Sbjct: 383 LIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVD---------------------R 421

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           L K Q+      I E M  K  +P   T+  ++  L +  R+  A
Sbjct: 422 LCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 144/500 (28%), Positives = 248/500 (49%), Gaps = 51/500 (10%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++F++++V ++        +  N VI    R+   D AI L+R+M +R    +IY++  
Sbjct: 90  AIDFFDYMVRSRP---FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG------------- 279
           L+   C  ++L  ++    ++   G  P  VTFN L++GLC    +              
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 280 --RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
              A  L D M   G  P  +T+NTLI+GLCL+G + +A +L+++MV      + VTYGT
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           I+NG+ K+G       +L  MEE     +  IYS +I  L K+G   DA  L+ +M+EKG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             PN   Y+ +IDG C  G+  +A+ +L +MI      +  T+++L+    + GK  +A 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 458 EIWKDMAKNNCVY-NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           ++  +M  + C++ + V Y+ +I+G C+  +  +A+ ++  M S    PDVV ++++I  
Sbjct: 387 KLCDEML-HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C A  V+E ++L  E+         +  TYN L++  C+  N++ + DL   M+  G  
Sbjct: 442 YCRAKRVDEGMQLLREI--SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499

Query: 577 PDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
           PD +TCNI L      EKLE            A+ LF            EV+    +   
Sbjct: 500 PDTITCNILLYGFCENEKLEE-----------ALELF------------EVIQMSKIDLD 536

Query: 635 TSTWERVVQELCRPKRIQAA 654
           T  +  ++  +C+  ++  A
Sbjct: 537 TVAYNIIIHGMCKGSKVDEA 556



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 143/496 (28%), Positives = 242/496 (48%), Gaps = 24/496 (4%)

Query: 106 LYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           LYR    +R+ L   SF  + K +   H +  ++  F  +  +   +  V +FN++L+ +
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT-KLGFQPDVVTFNTLLHGL 186

Query: 165 IQEGLYHRALEFYNHIVNAK------------HMNILPNTLTFNLVIKTVCRLGLVDNAI 212
             E     AL  + ++V                + + P  +TFN +I  +C  G V  A 
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L  +M  +    D+ TY T+++G+CK      A+ LL +M+     P  V ++ +I+ L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK+G    A  L   M  KG  PN  TYN +I G C  G    A  LL  M+  +  P+ 
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           +T+  +I+  VK G+  +  ++   M  R    +   Y+++I G  K  + +DA    K 
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KH 422

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M +    P+ V ++ +ID  CR  + DE  ++L E+   G  AN  TY++L+ GF E   
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            + A +++++M  +    + +  ++L++G CE+ KL EA  ++  +       D VAY+ 
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEP--KSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +IHG+C    V+EA  LF    C  P    +PDV TYN++++  C +S IS +  L + M
Sbjct: 543 IIHGMCKGSKVDEAWDLF----CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598

Query: 571 MDRGCDPDLVTCNIFL 586
            D G +PD  T N  +
Sbjct: 599 KDNGHEPDNSTYNTLI 614



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 228/446 (51%), Gaps = 10/446 (2%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+ LF  MV E      V +FN+++N +  EG    A    N +V  K ++I  + +T+
Sbjct: 209 EAVALFDQMV-EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GKGLHI--DVVTY 264

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
             ++  +C++G   +A+ L  +M   + +PD+  Y  ++D LCK+    +A  L  EM  
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P   T+N +I+G C  G    A +L+ +M  +   P+ +T+N LI     +G L +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  L D M+     P+ VTY ++I G  K  R  D   +   M       +   ++T+I 
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIID 440

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              +  + ++ M+L +++  +G   NT  Y+ LI G C V   + A+++  EMI++G   
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  T + L+ GF E+ K  +A+E+++ +  +    + V Y+++IHG+C+  K+ EA  ++
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             +   G +PDV  Y+ MI G C   ++ +A  LF++M   +   +PD  TYN L+    
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK--DNGHEPDNSTYNTLIRGCL 618

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVT 581
           K   I  SI+L++ M   G   D  T
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFT 644



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 186/398 (46%), Gaps = 41/398 (10%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           + A+ L   M +E H K  V  ++++++ + ++G +  A   ++ ++      I PN  T
Sbjct: 278 KSALNLLSKM-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK---GIAPNVFT 333

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I   C  G   +A +L R+M  R   PD+ T+  L+    KE +L EA  L DEM 
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF------------------------- 289
               FP  VT+N +I G CK+     A  + D M                          
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453

Query: 290 ------LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
                  +G + N  TYNTLIHG C   NL+ A  L   M++    P+ +T   ++ G  
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           +  +  +   +   ++  K  ++   Y+ +I G+ K  K ++A  L+  +   G +P+  
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y+ +I G C      +A  +  +M +NG   +  TY++L++G  ++G+  K++E+  +M
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633

Query: 464 AKNNCVYNEVCYSV-LIHGLCEDGKLREARMVWTQMLS 500
             N   ++   +++ ++  L  DG+L ++   ++ MLS
Sbjct: 634 RSNG--FSGDAFTIKMVADLITDGRLDKS---FSDMLS 666


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 263/522 (50%), Gaps = 9/522 (1%)

Query: 67  DEIFNSTPKLGSYQLGDSTFY--SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           +E F+   KLG   +  + F   +LI     +  F   + +   M        E ++  +
Sbjct: 343 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 402

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             A  K  ++E+A+ LF  M D+   K TV  +NS++N   ++G   RA    + +V   
Sbjct: 403 IHALCKRGMIEDALCLFDKMRDK-GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE- 460

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              + P   +++ +I  +CR G + + ++L REM  R    + YT+  L++G CK+ ++D
Sbjct: 461 --GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 518

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L D+M      P  VTFNV+I G C  G + +A +L D M   G  P+  TY +LI
Sbjct: 519 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 578

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLCL   + KA   +  +  S  + N  +   ++ G  + GR  +   +   M  R   
Sbjct: 579 SGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVK 638

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           ++   ++ ++    K+   E +  L+++M E+G KP+ + Y+ +ID L +     +A   
Sbjct: 639 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 698

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             +M+ +G + N  T++ L+    +SG    A  + K+M   N + N+  Y+  +     
Sbjct: 699 WDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT 758

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +G + +A+ + + ML +G    +V+++ +I GLC AG ++EA+ L +++   E    PD 
Sbjct: 759 EGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT--ESGFSPDC 815

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            +Y+ +++ LCK  +I+ + +L N M+ +G  PD+V  NIF+
Sbjct: 816 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 857



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 235/490 (47%), Gaps = 16/490 (3%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + ++PN   +N +I  +C+    D+A +LF+EM  R  EP+  TY  L+  LCK   +++
Sbjct: 355 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 414

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ L D+M+  G   T   +N LING CK G L RA  L+  M  +G  P   +Y+ LI 
Sbjct: 415 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 474

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  G+L   + L   M       N  T+  +ING  K  +  + AR+   M +     
Sbjct: 475 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 534

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           NE  ++ +I G    G    A +L+ QM+E G KP+   Y +LI GLC      +A E +
Sbjct: 535 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 594

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            ++ N+    N F+ ++L+ GFF  G+  +   +W +MA      + V ++++++   + 
Sbjct: 595 ADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 654

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
               ++ +++ +M  +G KPD + Y+ MI  L    ++ +AL  +++M+       P+  
Sbjct: 655 HDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVV--DGYSPNTV 712

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQDGTDFL 603
           T+ +L+N LCK   +  +  L   M+     P+  T N FL   A +  +E  +D    +
Sbjct: 713 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772

Query: 604 -----------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                      N L   L K  +      ++  + +   SP   ++  ++ ELC+   I 
Sbjct: 773 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 832

Query: 653 AAINKCWSNL 662
            A  + W+ +
Sbjct: 833 KAF-ELWNEM 841



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 156/591 (26%), Positives = 268/591 (45%), Gaps = 21/591 (3%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
            L +  + + I+ Y  S +      ++ RM  E        +  +     K   V+EA+ 
Sbjct: 218 HLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE 277

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           + + MV+       V     V      E L   AL   + ++    +  +P+    + +I
Sbjct: 278 VKNVMVNIGVTADEVTYRTLVYGFCRMEEL-EMALRITHDMI---RLGFVPSEANCSFMI 333

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             + +  LV+ A  L  ++      P+++ Y  L+D LCK  R D+A  L  EM   G  
Sbjct: 334 DELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLE 393

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+ +LI+ LCK G +  A  L D M  KG       YN+LI+G C +G+LD+A  L
Sbjct: 394 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 453

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  MV     P   +Y  +I GL + G       +   M ER    N Y ++ LI+G  K
Sbjct: 454 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 513

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           + K ++A +L+ +M++    PN V ++ +I+G C VG   +A ++  +M+  G   + +T
Sbjct: 514 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 573

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y SL+ G   +    KA E   D+  +  V N    + L++G   +G+  E   +W +M 
Sbjct: 574 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 633

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            RG K D+V+++ +++        E++  LF EM   E   +PD   Y  +++AL K+ N
Sbjct: 634 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM--KEQGVKPDDIFYTCMIDALSKEEN 691

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-------------KEKLEAPQDGTDFLNEL 606
           +  +++  + M+  G  P+ VT  + +  L             KE L        F    
Sbjct: 692 MIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC 751

Query: 607 AIRLFKRQRTSGGFK-IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +  F  +      K +   MLQ  L+   S +  +++ LC+  +IQ AI+
Sbjct: 752 FLDYFATEGDMEKAKDLHSAMLQGHLASIVS-FNILIKGLCKAGKIQEAID 801



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 200/421 (47%), Gaps = 41/421 (9%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I  N  T + ++ ++ ++     A  LF +M       D Y Y   +   C+   LD A 
Sbjct: 182 ITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 241

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+  M+ +G   + V +NVL+ GLCKN  +  A ++ + M   G   +EVTY TL++G 
Sbjct: 242 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF 301

Query: 308 CLKGNLDKAVSLLDRMV-------ASKC----------------------------MPNE 332
           C    L+ A+ +   M+        + C                            +PN 
Sbjct: 302 CRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 361

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y  +I+ L K  R  D  R+   M  R    NE  Y+ LI  L K G  EDA+ L+ +
Sbjct: 362 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 421

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M +KG K     Y++LI+G C+ G  D A  +L  M+  G    A +YS L+ G   +G 
Sbjct: 422 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGD 481

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
               +E+ ++MA+    +N   ++ LI+G C+D K+ EA  ++ +M+     P+ V ++ 
Sbjct: 482 LSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNV 541

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS----IDLLN 568
           MI G C  G++ +A +L+++M  +E   +PD +TY  L++ LC  S +S +     DL N
Sbjct: 542 MIEGYCLVGNIRKAFQLYDQM--VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLEN 599

Query: 569 S 569
           S
Sbjct: 600 S 600



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/479 (23%), Positives = 211/479 (44%), Gaps = 40/479 (8%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SLI  Y   G       +L  M +E       S+  +     +   +   + L H  +
Sbjct: 434 YNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMEL-HREM 492

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E        +F +++N   ++     A   ++ ++++   N++PN +TFN++I+  C +
Sbjct: 493 AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS---NVIPNEVTFNVMIEGYCLV 549

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC--------------------------- 238
           G +  A QL+ +M     +PD YTY +L+ GLC                           
Sbjct: 550 GNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSL 609

Query: 239 --------KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
                   +E R  E   L DEM V G     V+F +++    K  +  ++  L   M  
Sbjct: 610 TALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKE 669

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G  P+++ Y  +I  L  + N+ +A++  D+MV     PN VT+  +IN L K G    
Sbjct: 670 QGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGS 729

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +   M       N++ Y+  +     EG  E A  L   M++ G   + V ++ LI 
Sbjct: 730 AELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIK 788

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC+ GK  EA +++ ++  +G + +  +YS+++    + G  +KA E+W +M       
Sbjct: 789 GLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKP 848

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
           + V Y++ I      G+  +A  ++T M+  G +P+   Y +++ G+    S  +AL L
Sbjct: 849 DVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKGQALLL 907



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 185/427 (43%), Gaps = 23/427 (5%)

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
           YT   ++  L K  +   A  L D+M   G       +   I   C++  L  A  LV  
Sbjct: 187 YTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 246

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  +G   + V YN L++GLC    + +AV + + MV      +EVTY T++ G  ++  
Sbjct: 247 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 306

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                R+   M    F  +E   S +I  L K+   E+A  L  ++ + G  PN   Y+A
Sbjct: 307 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 366

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LID LC+  + D+A+ +  EM   G   N  TY+ L+    + G    A+ ++  M    
Sbjct: 367 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 426

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
                  Y+ LI+G C+ G L  AR + + M+  G  P   +YS +I GLC  G +   +
Sbjct: 427 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 486

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           +L  EM   E     + +T+  L+N  CK   +  +  L + M+D    P+ VT N+ + 
Sbjct: 487 ELHREM--AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI- 543

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                     +G   +  +             F++ + M++  L P   T+  ++  LC 
Sbjct: 544 ----------EGYCLVGNI----------RKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 583

Query: 648 PKRIQAA 654
              +  A
Sbjct: 584 TSGVSKA 590



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 34/306 (11%)

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           VN+Y  S ++  L K  +   A  L+ +M++ G   +  VY+A I   C     D A  +
Sbjct: 184 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 243

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           +  M + G  A+A  Y+ LM G  ++ +  +AVE+   M       +EV Y  L++G C 
Sbjct: 244 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 303

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             +L  A  +   M+  G  P     S MI  L     VEEA  L  ++  L     P+V
Sbjct: 304 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL--GMVPNV 361

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
           F YN L++ LCK      +  L   M  RG +P+ VT  I + AL ++          + 
Sbjct: 362 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR---------GMI 412

Query: 605 ELAIRLFKRQRTSG-------------GF----------KIVEVMLQKFLSPQTSTWERV 641
           E A+ LF + R  G             G+           ++  M+++ L+P  +++  +
Sbjct: 413 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 472

Query: 642 VQELCR 647
           +  LCR
Sbjct: 473 IAGLCR 478


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 263/522 (50%), Gaps = 9/522 (1%)

Query: 67  DEIFNSTPKLGSYQLGDSTFY--SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           +E F+   KLG   +  + F   +LI     +  F   + +   M        E ++  +
Sbjct: 320 EEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAIL 379

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             A  K  ++E+A+ LF  M D+   K TV  +NS++N   ++G   RA    + +V   
Sbjct: 380 IHALCKRGMIEDALCLFDKMRDK-GIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKE- 437

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              + P   +++ +I  +CR G + + ++L REM  R    + YT+  L++G CK+ ++D
Sbjct: 438 --GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMD 495

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L D+M      P  VTFNV+I G C  G + +A +L D M   G  P+  TY +LI
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLI 555

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GLCL   + KA   +  +  S  + N  +   ++ G  + GR  +   +   M  R   
Sbjct: 556 SGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVK 615

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           ++   ++ ++    K+   E +  L+++M E+G KP+ + Y+ +ID L +     +A   
Sbjct: 616 LDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNC 675

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             +M+ +G + N  T++ L+    +SG    A  + K+M   N + N+  Y+  +     
Sbjct: 676 WDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT 735

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +G + +A+ + + ML +G    +V+++ +I GLC AG ++EA+ L +++   E    PD 
Sbjct: 736 EGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKIT--ESGFSPDC 792

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            +Y+ +++ LCK  +I+ + +L N M+ +G  PD+V  NIF+
Sbjct: 793 ISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFI 834



 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 234/490 (47%), Gaps = 16/490 (3%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           + ++PN   +N +I  +C+    D+A +LF+EM  R  EP+  TY  L+  LCK   +++
Sbjct: 332 LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIED 391

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ L D+M+  G   T   +N LING CK G L RA  L+  M  +G  P   +Y+ LI 
Sbjct: 392 ALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIA 451

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  G+L   + L   M       N  T+  +ING  K  +  + AR+   M +     
Sbjct: 452 GLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           NE  ++ +I G    G    A +L+ QM+E G KP+   Y +LI GLC      +A E +
Sbjct: 512 NEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKANEFV 571

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            ++ N+    N F+ ++L+ GFF  G+  +   +W +MA      + V ++++++   + 
Sbjct: 572 ADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQ 631

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
               ++ +++ +M  +G KPD + Y+ MI  L    ++ +AL  +++M+       P+  
Sbjct: 632 HDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVV--DGYSPNTV 689

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--ALKEKLEAPQD----- 598
           T+ +L+N LCK   +  +  L   M+     P+  T N FL   A +  +E  +D     
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 599 ------GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                      N L   L K  +      ++  + +   SP   ++  ++ ELC+   I 
Sbjct: 750 LQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDIN 809

Query: 653 AAINKCWSNL 662
            A  + W+ +
Sbjct: 810 KAF-ELWNEM 818



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/591 (26%), Positives = 268/591 (45%), Gaps = 21/591 (3%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
            L +  + + I+ Y  S +      ++ RM  E        +  +     K   V+EA+ 
Sbjct: 195 HLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVE 254

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           + + MV+       V     V      E L   AL   + ++    +  +P+    + +I
Sbjct: 255 VKNVMVNIGVTADEVTYRTLVYGFCRMEEL-EMALRITHDMI---RLGFVPSEANCSFMI 310

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             + +  LV+ A  L  ++      P+++ Y  L+D LCK  R D+A  L  EM   G  
Sbjct: 311 DELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLE 370

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+ +LI+ LCK G +  A  L D M  KG       YN+LI+G C +G+LD+A  L
Sbjct: 371 PNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGL 430

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  MV     P   +Y  +I GL + G       +   M ER    N Y ++ LI+G  K
Sbjct: 431 LSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCK 490

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           + K ++A +L+ +M++    PN V ++ +I+G C VG   +A ++  +M+  G   + +T
Sbjct: 491 DKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYT 550

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y SL+ G   +    KA E   D+  +  V N    + L++G   +G+  E   +W +M 
Sbjct: 551 YRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMA 610

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            RG K D+V+++ +++        E++  LF EM   E   +PD   Y  +++AL K+ N
Sbjct: 611 VRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREM--KEQGVKPDDIFYTCMIDALSKEEN 668

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-------------KEKLEAPQDGTDFLNEL 606
           +  +++  + M+  G  P+ VT  + +  L             KE L        F    
Sbjct: 669 MIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNC 728

Query: 607 AIRLFKRQRTSGGFK-IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +  F  +      K +   MLQ  L+   S +  +++ LC+  +IQ AI+
Sbjct: 729 FLDYFATEGDMEKAKDLHSAMLQGHLASIVS-FNILIKGLCKAGKIQEAID 778



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 200/422 (47%), Gaps = 41/422 (9%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I  N  T + ++ ++ ++     A  LF +M       D Y Y   +   C+   LD A
Sbjct: 158 GITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGA 217

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L+  M+ +G   + V +NVL+ GLCKN  +  A ++ + M   G   +EVTY TL++G
Sbjct: 218 RGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYG 277

Query: 307 LCLKGNLDKAVSLLDRMV-------ASKC----------------------------MPN 331
            C    L+ A+ +   M+        + C                            +PN
Sbjct: 278 FCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPN 337

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
              Y  +I+ L K  R  D  R+   M  R    NE  Y+ LI  L K G  EDA+ L+ 
Sbjct: 338 VFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFD 397

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M +KG K     Y++LI+G C+ G  D A  +L  M+  G    A +YS L+ G   +G
Sbjct: 398 KMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNG 457

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
                +E+ ++MA+    +N   ++ LI+G C+D K+ EA  ++ +M+     P+ V ++
Sbjct: 458 DLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFN 517

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS----IDLL 567
            MI G C  G++ +A +L+++M  +E   +PD +TY  L++ LC  S +S +     DL 
Sbjct: 518 VMIEGYCLVGNIRKAFQLYDQM--VEMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLE 575

Query: 568 NS 569
           NS
Sbjct: 576 NS 577



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 185/427 (43%), Gaps = 23/427 (5%)

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
           YT   ++  L K  +   A  L D+M   G       +   I   C++  L  A  LV  
Sbjct: 164 YTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVR 223

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  +G   + V YN L++GLC    + +AV + + MV      +EVTY T++ G  ++  
Sbjct: 224 MESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEE 283

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                R+   M    F  +E   S +I  L K+   E+A  L  ++ + G  PN   Y+A
Sbjct: 284 LEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNA 343

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LID LC+  + D+A+ +  EM   G   N  TY+ L+    + G    A+ ++  M    
Sbjct: 344 LIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKG 403

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
                  Y+ LI+G C+ G L  AR + + M+  G  P   +YS +I GLC  G +   +
Sbjct: 404 IKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCM 463

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           +L  EM   E     + +T+  L+N  CK   +  +  L + M+D    P+ VT N+ + 
Sbjct: 464 ELHREM--AERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMI- 520

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                     +G   +  +             F++ + M++  L P   T+  ++  LC 
Sbjct: 521 ----------EGYCLVGNI----------RKAFQLYDQMVEMGLKPDNYTYRSLISGLCL 560

Query: 648 PKRIQAA 654
              +  A
Sbjct: 561 TSGVSKA 567



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 34/306 (11%)

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           VN+Y  S ++  L K  +   A  L+ +M++ G   +  VY+A I   C     D A  +
Sbjct: 161 VNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGL 220

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           +  M + G  A+A  Y+ LM G  ++ +  +AVE+   M       +EV Y  L++G C 
Sbjct: 221 VVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCR 280

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
             +L  A  +   M+  G  P     S MI  L     VEEA  L  ++  L     P+V
Sbjct: 281 MEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDL--GMVPNV 338

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
           F YN L++ LCK      +  L   M  RG +P+ VT  I + AL ++          + 
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKR---------GMI 389

Query: 605 ELAIRLFKRQRTSG-------------GF----------KIVEVMLQKFLSPQTSTWERV 641
           E A+ LF + R  G             G+           ++  M+++ L+P  +++  +
Sbjct: 390 EDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPL 449

Query: 642 VQELCR 647
           +  LCR
Sbjct: 450 IAGLCR 455



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 118/257 (45%), Gaps = 38/257 (14%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  I  A  K H  E++  LF  M ++   K     +  +++ + +E    +AL  ++ 
Sbjct: 620 SFTIIVYAALKQHDKEKSCVLFREMKEQ-GVKPDDIFYTCMIDALSKEENMIQALNCWDQ 678

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD---- 235
           +V   +    PNT+T  ++I  +C+ G + +A  L +EM   N  P+ +TY   +D    
Sbjct: 679 MVVDGYS---PNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFAT 735

Query: 236 ------------------------------GLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
                                         GLCK  ++ EA+ L+ ++   G  P  +++
Sbjct: 736 EGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISY 795

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           + +I+ LCK G++ +A +L + M  KG  P+ V YN  I    + G  DKA+ +   M+ 
Sbjct: 796 STIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIR 855

Query: 326 SKCMPNEVTYGTIINGL 342
           S   PN  TY  +++G+
Sbjct: 856 SGVQPNWDTYRALLSGI 872



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 4/159 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N  L+    EG   +A + ++ ++       L + ++FN++IK +C+ G +  AI L 
Sbjct: 725 TYNCFLDYFATEGDMEKAKDLHSAMLQGH----LASIVSFNILIKGLCKAGKIQEAIDLM 780

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            ++      PD  +Y T++  LCK   +++A  L +EM   G  P  V +N+ I     +
Sbjct: 781 SKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVH 840

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           GE  +A  +  NM   G  PN  TY  L+ G+ L  + D
Sbjct: 841 GESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMLHYD 879


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/440 (30%), Positives = 230/440 (52%), Gaps = 28/440 (6%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++F++++V ++        +  N VI    R+   D AI L+R+M +R    +IY++  
Sbjct: 90  AIDFFDYMVRSRP---FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG------------- 279
           L+   C  ++L  ++    ++   G  P  VTFN L++GLC    +              
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 280 --RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
              A  L D M   G  P  +T+NTLI+GLCL+G + +A +L+++MV      + VTYGT
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           I+NG+ K+G       +L  MEE     +  IYS +I  L K+G   DA  L+ +M+EKG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             PN   Y+ +IDG C  G+  +A+ +L +MI      +  T+++L+    + GK  +A 
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386

Query: 458 EIWKDMAKNNCVY-NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           ++  +M  + C++ + V Y+ +I+G C+  +  +A+ ++  M S    PDVV ++++I  
Sbjct: 387 KLCDEML-HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C A  V+E ++L  E+         +  TYN L++  C+  N++ + DL   M+  G  
Sbjct: 442 YCRAKRVDEGMQLLREI--SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499

Query: 577 PDLVTCNIFLTAL--KEKLE 594
           PD +TCNI L      EKLE
Sbjct: 500 PDTITCNILLYGFCENEKLE 519



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 154/561 (27%), Positives = 265/561 (47%), Gaps = 37/561 (6%)

Query: 106 LYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           LYR    +R+ L   SF  + K +   H +  ++  F  +  +   +  V +FN++L+ +
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT-KLGFQPDVVTFNTLLHGL 186

Query: 165 IQEGLYHRALEFYNHIVNAK------------HMNILPNTLTFNLVIKTVCRLGLVDNAI 212
             E     AL  + ++V                + + P  +TFN +I  +C  G V  A 
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L  +M  +    D+ TY T+++G+CK      A+ LL +M+     P  V ++ +I+ L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK+G    A  L   M  KG  PN  TYN +I G C  G    A  LL  M+  +  P+ 
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           +T+  +I+  VK G+  +  ++   M  R    +   Y+++I G  K  + +DA    K 
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KH 422

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M +    P+ V ++ +ID  CR  + DE  ++L E+   G  AN  TY++L+ GF E   
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            + A +++++M  +    + +  ++L++G CE+ KL EA  ++  +       D VAY+ 
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEP--KSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +IHG+C    V+EA  LF    C  P    +PDV TYN++++  C +S IS +  L + M
Sbjct: 543 IIHGMCKGSKVDEAWDLF----CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG--GFKIVEVMLQ 628
            D G +PD  T N  +    +  E  +         +I L    R++G  G      M +
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDK---------SIELISEMRSNGFSGDAFTIKMAE 649

Query: 629 KFLSPQTSTWERVVQELCRPK 649
           + +   +   E +++   RPK
Sbjct: 650 EIICRVSD--EEIIENYLRPK 668


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 206/389 (52%), Gaps = 8/389 (2%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T TFN++++ +C  G    A++L R+MP     P+  TY T++ G C   R+  A+ ++ 
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 252 EM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLCL 309
           EM +  G  P   T+  +I+G CK G +  A K+ D M  KG + P  V YN LI G C 
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G LD A+   DRMV         TY  +++ L   GR  +   ++  M  +    + + 
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI+G  KEG  + A+++++ M  +G +   V Y+ALI  L + G+  E +++  E +
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +   Y++L+     SG   +A EI  +M K     ++V Y+ L+ GLC  G++ 
Sbjct: 724 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 783

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EAR +  +M  RG +PD+V Y+++I G    G V++AL++ NEM+       P + TYN 
Sbjct: 784 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM--NKGFNPTLLTYNA 841

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           L+  LCK      + +++  M++ G  PD
Sbjct: 842 LIQGLCKNGQGDDAENMVKEMVENGITPD 870



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 200/404 (49%), Gaps = 11/404 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN +L  +   G   RALE    +         PN +T+N VI   C  G V  A+ + 
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPR-------PNAVTYNTVIAGFCSRGRVQAALDIM 542

Query: 216 REMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPVTFNVLINGLC 273
           REM  R    P+ YTY T++ G CK  R+DEAV + DEM   G   P  V +N LI G C
Sbjct: 543 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 602

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G+L  A    D M  +G      TYN L+H L + G   +A  L++ M      P+  
Sbjct: 603 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 662

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +ING  K G       +  +M  R        Y+ LI  L K+G+ ++  KL+ + 
Sbjct: 663 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 722

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + +G +P+ V+Y+ALI+     G  D A EI+ EM     A +  TY++LM+G    G+ 
Sbjct: 723 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 782

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A ++  +M +     + V Y+ LI G    G +++A  +  +M+++G  P ++ Y+++
Sbjct: 783 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 842

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           I GLC  G  ++A  +  EM  +E    PD  TY  L+  L  +
Sbjct: 843 IQGLCKNGQGDDAENMVKEM--VENGITPDDSTYISLIEGLTTE 884



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 199/387 (51%), Gaps = 29/387 (7%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TFN+++  LC  G+  RA +L+  M      PN VTYNT+I G C +G +  A+ ++  
Sbjct: 489 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 544

Query: 323 MVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSMEER-KFHVNEYIYSTLISGLFKE 380
           M     + PN+ TYGT+I+G  K+GR  +  +V   M  + +      +Y+ LI G   +
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK + A+    +M+E+G       Y+ L+  L   G+  EA E++ EM   G A + FTY
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+ G  + G   KA+EI+++M++       V Y+ LI+ L + G+++E   ++ + + 
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           RG +PD+V Y+++I+    +G+++ A ++  EM   + +  PD  TYN L+  LC    +
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME--KKRIAPDDVTYNTLMRGLCLLGRV 782

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  L++ M +RG  PDLVT N  ++    K        D  + L IR           
Sbjct: 783 DEARKLIDEMTERGIQPDLVTYNTLISGYSMK-------GDVKDALRIR----------- 824

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCR 647
                M+ K  +P   T+  ++Q LC+
Sbjct: 825 ---NEMMNKGFNPTLLTYNALIQGLCK 848



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 190/364 (52%), Gaps = 4/364 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ ++I  + + G  ++   ++  MR    +   + ++  +   + K   V+EA+++F  
Sbjct: 521 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 580

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ +   K     +N+++     +G    AL + + +V      +     T+NL++  + 
Sbjct: 581 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV---ERGVAMTVATYNLLVHALF 637

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G    A +L  EM  +   PD++TY  L++G CKE  + +A+ + + M   G   T V
Sbjct: 638 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 697

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  LI  L K G++    KL D    +G  P+ V YN LI+     GN+D+A  ++  M
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              +  P++VTY T++ GL  LGR  +  +++  M ER    +   Y+TLISG   +G  
Sbjct: 758 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 817

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +DA+++  +MM KG  P  + Y+ALI GLC+ G+ D+AE ++ EM+ NG   +  TY SL
Sbjct: 818 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 877

Query: 444 MKGF 447
           ++G 
Sbjct: 878 IEGL 881



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 153/303 (50%), Gaps = 26/303 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ ++  L   GK   A++L +QM     +PN V Y+ +I G C  G+   A +I+ EM 
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 546

Query: 430 N-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE-VCYSVLIHGLCEDGK 487
              G A N +TY +++ G+ + G+  +AV+++ +M     V  E V Y+ LI G C+ GK
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 606

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           L  A +   +M+ RG    V  Y+ ++H L   G   EA +L  EM        PDVFTY
Sbjct: 607 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG--KGLAPDVFTY 664

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           NIL+N  CK+ N+  ++++  +M  RG    +VT    + AL +K +  +  TD L + A
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE--TDKLFDEA 722

Query: 608 IR------------LFKRQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           +R            L     TSG     F+I+  M +K ++P   T+  +++ LC   R+
Sbjct: 723 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 782

Query: 652 QAA 654
             A
Sbjct: 783 DEA 785



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 10/298 (3%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +LI  Y + G   +   +LYR R  +R V     +  +     A  ++      + +V
Sbjct: 594 YNALIGGYCDQGKLDT--ALLYRDRMVERGV--AMTVATYNLLVHALFMDGRGTEAYELV 649

Query: 146 DEFHCK---RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +E   K     V ++N ++N   +EG   +ALE +    N     +    +T+  +I  +
Sbjct: 650 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE---NMSRRGVRATVVTYTALIYAL 706

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            + G V    +LF E   R   PD+  Y  L++       +D A  ++ EM+     P  
Sbjct: 707 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 766

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N L+ GLC  G +  A KL+D M  +G  P+ VTYNTLI G  +KG++  A+ + + 
Sbjct: 767 VTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 826

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           M+     P  +TY  +I GL K G+  D   ++  M E     ++  Y +LI GL  E
Sbjct: 827 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 27/218 (12%)

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ +++    +GK  +A+E+ + M + N V     Y+ +I G C  G+++ A  +  +M
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 545

Query: 499 LSRG-CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
             RG   P+   Y ++I G C  G V+EA+K+F+EML  + + +P+   YN L+   C Q
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKPEAVMYNALIGGYCDQ 604

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
             +  ++   + M++RG    + T N+ + AL                     F   R +
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHAL---------------------FMDGRGT 643

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             +++VE M  K L+P   T+  ++   C+   ++ A+
Sbjct: 644 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 681



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 47/232 (20%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  +   G+ K    +   M R        ++  +  A  K   V+E  +LF   
Sbjct: 663 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 722

Query: 145 VDEFHCKRTVKS----FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           V     +R ++     +N+++N     G   RA E    +   +   I P+ +T+N +++
Sbjct: 723 V-----RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR---IAPDDVTYNTLMR 774

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM-------------------------- 234
            +C LG VD A +L  EM  R  +PD+ TY TL+                          
Sbjct: 775 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 834

Query: 235 ---------DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
                     GLCK  + D+A  ++ EM  +G  P   T+  LI GL    E
Sbjct: 835 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 886


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 136/465 (29%), Positives = 233/465 (50%), Gaps = 10/465 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +TF  +I   C+   +D+A+++   M   NC+ D+  Y  L++ L K+ RL EA   
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+EM  +G  P  V +  +I+G CK G +G A ++   M  +GC PN  TY +LI+GL  
Sbjct: 446 LNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              L KA++L+ +M      P  + Y T+I G  K     +  R+   ME+     +E  
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQA 565

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ L   L K G+AE+A   +  ++ KG     V Y++L+DG  + G  D A  ++ +M+
Sbjct: 566 YNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           N GC A+ +TYS L++   +  K ++A+ I   M  +    N V Y+++I  + ++GK  
Sbjct: 623 NEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHD 682

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A+ ++ +M+S G KP    Y+  I   C  G +EEA  L  EM        PDV TY+I
Sbjct: 683 HAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEM--ERDGVTPDVVTYHI 740

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            +N       +  +   L  M+D  C+P+   C  +   LK  L+       +++   + 
Sbjct: 741 FINGCGHMGYMDRAFSTLKRMVDASCEPN---CWTYWLLLKHFLKMSLINAHYIDTSGMW 797

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            +    T   ++++E M++  L+P   T+  ++   C+  R++ A
Sbjct: 798 NWIELNTV--WQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEA 840



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 140/478 (29%), Positives = 228/478 (47%), Gaps = 20/478 (4%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  ++ ++I+ +     V  A+ L   M    C  +++ Y  L+ GLCKE R+ +A  LL
Sbjct: 248 NEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLL 307

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM + G  P+  T+N +I+G CK+G +  A  +   M   GC P++ TYN+LI+GLC  
Sbjct: 308 DEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-G 366

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G LD+A  LL+  +A    P  +T+  +ING  K  R  D  RV  +M      ++   Y
Sbjct: 367 GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAY 426

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             LI+ L K+ + ++A +   +M   G  PN V+Y+++IDG C+VG    A E+   M +
Sbjct: 427 GVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEH 486

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            GC  NA+TY SL+ G  +  K HKA+ +   M ++      + Y+ LI G C+  +   
Sbjct: 487 EGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDN 546

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++  M   G  PD  AY+ +   LC +G  EEA         +  K      TY  L
Sbjct: 547 AFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTK-----VTYTSL 601

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAI 608
           ++   K  N   +  L+  M++ GC  DL T ++ L AL  ++KL       D +    +
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661

Query: 609 R------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +            + K  +      +   M+     P  +T+   +   C+  +I+ A
Sbjct: 662 KCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEA 719



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 137/518 (26%), Positives = 232/518 (44%), Gaps = 54/518 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y KA  +++A+R+   M+   +CK  ++++  ++NV+I++     A E  N 
Sbjct: 390 TFTNLINGYCKAERIDDALRVKSNMISS-NCKLDLQAYGVLINVLIKKCRLKEAKETLNE 448

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +       + PN + +  +I   C++G+V  A+++F+ M    C P+ +TY +L+ GL +
Sbjct: 449 MFAN---GLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQ 505

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE-- 297
           + +L +A+ L+ +MQ DG  P  + +  LI G CK  E   A +L + M   G  P+E  
Sbjct: 506 DKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQA 565

Query: 298 ------------------------------VTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
                                         VTY +L+ G    GN D A  L+++MV   
Sbjct: 566 YNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEG 625

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C  +  TY  ++  L K  +  +   +L  M       N   Y+ +IS + KEGK + A 
Sbjct: 626 CKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAK 685

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+ +M+  G KP+   Y+  I   C++G+ +EAE ++ EM  +G   +  TY   + G 
Sbjct: 686 SLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGC 745

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI-----------HGLCEDGKLR--EARMV 494
              G   +A    K M   +C  N   Y +L+           H +   G     E   V
Sbjct: 746 GHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTV 805

Query: 495 WT---QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
           W    +M+  G  P VV YSS+I G C A  +EEA  L + M  L     P+   Y +L+
Sbjct: 806 WQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHM--LGKAISPNEEIYTMLI 863

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              C        +  +  M++ G  P L + +  +  L
Sbjct: 864 KCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGL 901



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/474 (27%), Positives = 223/474 (47%), Gaps = 26/474 (5%)

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           V  K + + P    +NL ++++ R  + +   +L+  +      PD  TY T++   CK+
Sbjct: 135 VGGKRLVLSPKC--YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKK 192

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             L  A      ++  G      T N L+ G C+  +L +A  L+  M L GC  NE +Y
Sbjct: 193 GSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSY 252

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
             LI GL     + +A+ L+  MV   C  N   Y  +I GL K GR  D   +L  M  
Sbjct: 253 TILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPL 312

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R    + + Y+ +I G  K G+ +DA+ +   M + GC P+   Y++LI GLC  GK DE
Sbjct: 313 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDE 371

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           AEE+L   I  G      T+++L+ G+ ++ +   A+ +  +M  +NC  +   Y VLI+
Sbjct: 372 AEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLIN 431

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            L +  +L+EA+    +M + G  P+VV Y+S+I G C  G V  AL++F  M       
Sbjct: 432 VLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLM--EHEGC 489

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P+ +TY  L+  L +   +  ++ L+  M + G  P ++    + T ++ +        
Sbjct: 490 HPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIA---YTTLIQGQC------- 539

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      K+      F++ E+M +  L+P    +  +   LC+  R + A
Sbjct: 540 -----------KKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEA 582



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 202/461 (43%), Gaps = 59/461 (12%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + +   K H  + A RLF  M+++       +++N + + + + G   RA E Y+ 
Sbjct: 530 AYTTLIQGQCKKHEFDNAFRLFE-MMEKNGLTPDEQAYNVLTDALCKSG---RAEEAYSF 585

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V      ++   +T+  ++    + G  D A  L  +M    C+ D+YTY  L+  LCK
Sbjct: 586 LVRK---GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCK 642

Query: 240 ENRLDEAVLLLDEMQVDGCF-----------------------------------PTPVT 264
           + +L+EA+ +LD+M V G                                     P+  T
Sbjct: 643 QKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATT 702

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + V I+  CK G++  A  L+  M   G  P+ VTY+  I+G    G +D+A S L RMV
Sbjct: 703 YTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMV 762

Query: 325 ASKCMPNEVTYGTIINGLVKL----GRAVDGA------------RVLMSMEERKFHVNEY 368
            + C PN  TY  ++   +K+       +D +            ++L  M +   +    
Sbjct: 763 DASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVV 822

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YS++I+G  K  + E+A  L   M+ K   PN  +Y+ LI   C +    +    + +M
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDM 882

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I  G      +Y  L+ G  + G   +A  ++ D+   +  +NEV + +L  GL + G +
Sbjct: 883 IEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHV 942

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNA-GSVEEALK 528
                +   M +R C+ D  +YS +   +  A GSV   L+
Sbjct: 943 DFCSQLLAAMDNRHCRIDSESYSMLTDSIREASGSVVSELR 983



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 30/311 (9%)

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           AVD  + +  +  ++  ++   Y+  +  L +    E   KL+  ++++G  P+TV Y+ 
Sbjct: 125 AVDAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNT 184

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I   C+ G    A      +  +G   + +T ++L+ G+  +    KA  +   M    
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  NE  Y++LI GL E   +REA ++   M+  GC  ++  Y+ +I GLC  G + +A 
Sbjct: 245 CRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDAR 304

Query: 528 KLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            L +EM    P     P V+TYN +++  CK   +  ++ +   M   GC+PD  T N  
Sbjct: 305 GLLDEM----PLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSL 360

Query: 586 LTAL-KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
           +  L   KL+   +  + LN    R F                    +P   T+  ++  
Sbjct: 361 IYGLCGGKLD---EAEELLNGAIARGF--------------------TPTVITFTNLING 397

Query: 645 LCRPKRIQAAI 655
            C+ +RI  A+
Sbjct: 398 YCKAERIDDAL 408


>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 221/441 (50%), Gaps = 5/441 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S  + +  + + GL   A+  +  +   K + +  +  T+N V++   R G +D   +L+
Sbjct: 194 SLEAYIRCLCKGGLVEEAISVFGQL---KGIGVCASIATWNSVLRGSVRAGRIDFVWELY 250

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM   +   D++T   L+   C ENR+ +   LL  +  DG  P    FN LI+G CK+
Sbjct: 251 GEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKD 310

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
              GR + L+ +M  +   P+  TY  +++GLC  G   +   +   +      P+ V Y
Sbjct: 311 KAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMY 370

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+I+GL ++    D  ++   M ++ F  NEY Y+ +I G FK G  E+A K++++M +
Sbjct: 371 TTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCD 430

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KG    TV Y+ +I GLC  GK  EA ++  EM + G   N  TY++L++GF + GK  +
Sbjct: 431 KGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVE 490

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
              +  ++       +   Y+ LI  LC++G ++ A+++W  M +RG +P V  +  MI 
Sbjct: 491 GANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMIT 550

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G C  G   E ++    ML    K +P   ++  L+  L +   +  ++ +L+SM+  G 
Sbjct: 551 GFCKQGCAMEGMEWLTTML--RSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGF 608

Query: 576 DPDLVTCNIFLTALKEKLEAP 596
              +  CN  +T L EK   P
Sbjct: 609 RLSISICNSLVTKLCEKNSLP 629



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 221/461 (47%), Gaps = 10/461 (2%)

Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
           L+ +F+  F  + K  L+  ++R FH +  +        S N + + +++ G  + A  F
Sbjct: 125 LDPTFLSHFVEHQKNALI--SLRFFHWLSSQSGFSPDSSSCNVLFDALVEAGACNAAKSF 182

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
            +        N  P   +    I+ +C+ GLV+ AI +F ++        I T+ +++ G
Sbjct: 183 LDST------NFNPKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRG 236

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
             +  R+D    L  EM          T   L+   C    +     L+  +   G +P 
Sbjct: 237 SVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPR 296

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              +N LI G C      +   LL  M+A    P+  TY  ++NGL K G+  +G RV  
Sbjct: 297 NAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFK 356

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            +++R +  +  +Y+T+I GL +     DA KLW +M++KG  PN   Y+A+I G  ++G
Sbjct: 357 DLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIG 416

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
             +EA ++  EM + G      +Y+ ++KG    GK  +A +++++M+    + N + Y+
Sbjct: 417 NLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYN 476

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            L+ G C++GK+ E   +  ++L +G +P   +Y+ +I  LC  G ++ A  L+++M   
Sbjct: 477 ALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDM--Q 534

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
               +P V T++ ++   CKQ      ++ L +M+     P
Sbjct: 535 NRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRSKLRP 575



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 205/432 (47%), Gaps = 8/432 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K  LVEEAI +F  +     C  ++ ++NSVL   ++ G      E Y  +V +   +++
Sbjct: 204 KGGLVEEAISVFGQLKGIGVCA-SIATWNSVLRGSVRAGRIDFVWELYGEMVES---SVV 259

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            +  T   +++  C    + +   L R +      P    +  L+ G CK+        L
Sbjct: 260 ADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDL 319

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M      P   T+  ++NGLCK G+     ++  ++  +G  P+ V Y T+IHGLC 
Sbjct: 320 LHSMIARNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDRVMYTTMIHGLCR 379

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              L  A  L   M+    +PNE TY  +I+G  K+G   +  ++   M ++ +      
Sbjct: 380 MKWLGDARKLWFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVS 439

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ +I GL   GK ++A  L+++M  KG   N + Y+AL+ G C+ GK  E   +L+E++
Sbjct: 440 YNVMIKGLCSHGKIKEAHDLFEEMSHKGILRNHITYNALVRGFCKEGKIVEGANLLYELL 499

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIHGLCEDGKL 488
           + G   +A +Y+ L+    + G    A  +W DM +N  +   VC +  +I G C+ G  
Sbjct: 500 DQGIQPSAASYAPLIDKLCQEGDMQNAKILWDDM-QNRGMEPAVCTHDFMITGFCKQGCA 558

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            E     T ML    +P   ++ S+I  L     +++AL + + ML +  +    +   N
Sbjct: 559 MEGMEWLTTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISI--CN 616

Query: 549 ILLNALCKQSNI 560
            L+  LC+++++
Sbjct: 617 SLVTKLCEKNSL 628



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 20/271 (7%)

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P      A I  LC+ G  +EA  +  ++   G  A+  T++S+++G   +G+     E+
Sbjct: 190 PKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWEL 249

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           + +M +++ V +      L+   C++ ++ +   +  ++L  G  P   A++ +I G C 
Sbjct: 250 YGEMVESSVVADVHTVGYLVQAFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCK 309

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
             +      L + M+       PD+FTY  ++N LCK         +   + DRG  PD 
Sbjct: 310 DKAYGRVSDLLHSMIA--RNRAPDIFTYQEVVNGLCKGGKGPEGFRVFKDLKDRGYAPDR 367

Query: 580 VTCNIFLTAL----------KEKLEAPQDGTDFL------NELAIRLFKRQRTSGGFKIV 623
           V     +  L          K   E  Q G  FL      N +    FK       +K+ 
Sbjct: 368 VMYTTMIHGLCRMKWLGDARKLWFEMIQKG--FLPNEYTYNAMIHGYFKIGNLEEAWKMY 425

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             M  K    +T ++  +++ LC   +I+ A
Sbjct: 426 REMCDKGYGEKTVSYNVMIKGLCSHGKIKEA 456


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 145/485 (29%), Positives = 229/485 (47%), Gaps = 29/485 (5%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKS--FNSVLNVIIQEGLYHRALEFYNHIVNAK 184
           A  + HL    + L H        +R+  +   +++L+V+   GL   A+     +   +
Sbjct: 93  ALRRPHLAASLVDLLHRAALALGPRRSALASVVDTLLSVLADRGLLDDAVR---AVARVR 149

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
            + + PNT T N ++  + R    D + +L R +  +   P+++T+  ++D LCKE  L 
Sbjct: 150 ELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELA 205

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L   M+  GC P  VTFN LI+G  K GEL    +LV+ M   GC  + VTYN LI
Sbjct: 206 EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALI 265

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +  C  G ++ A      M     M N VT+ T ++   K G   +  ++   M  R   
Sbjct: 266 NCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMA 325

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           +NE+ Y+ LI G  K G+ +DA+ L  +M+ +G   N V Y+ L+DGLC+  K  EAE++
Sbjct: 326 LNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDV 385

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L  M   G  AN   Y++L+ G F +    KA+ +  +M       +   Y  LI GLC 
Sbjct: 386 LRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCN 445

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---------C 535
             KL EA+ + T+M   G +P+ + Y++M+     +G V EA+ +  ++L         C
Sbjct: 446 VHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNNGC 505

Query: 536 LEPKSQ-----------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           L    Q            D   Y  LL+   KQ N+  +  L   M+D G   DL     
Sbjct: 506 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 565

Query: 585 FLTAL 589
           F++  
Sbjct: 566 FISGF 570



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/438 (30%), Positives = 218/438 (49%), Gaps = 18/438 (4%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FN V++ + +EG    A   ++ +   K M  LP+ +TFN +I    + G +D   Q
Sbjct: 188 VFTFNIVIDFLCKEGELAEARSLFSRM---KEMGCLPDVVTFNSLIDGYGKCGELDEVEQ 244

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L  EM    C+ D+ TY  L++  CK  R++ A      M+ +G     VTF+  ++  C
Sbjct: 245 LVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFC 304

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G +  A KL   M ++G   NE TY  LI G C  G LD A+ LLD MV      N V
Sbjct: 305 KEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVV 364

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +++GL K  +  +   VL  ME+     NE +Y+TLI G F    +E A+ L  +M
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             KG + +  +Y ALI GLC V K DEA+ +L +M  +G   N   Y+++M   F+SGK 
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ + + +  +    N  C             L EA  ++ +M+ +G   D V Y+++
Sbjct: 485 PEAIAMLQKILDSGFQPNNGC-------------LNEAVQLFNEMVHKGMSLDKVVYTAL 531

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           + G    G++ +A  L  +M+  +   Q D+F Y   ++  C  + +  + ++ + M+  
Sbjct: 532 LDGYLKQGNLHDAFALKAKMI--DSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGH 589

Query: 574 GCDPDLVTCNIFLTALKE 591
           G  PD    N  +T + E
Sbjct: 590 GIAPDRAVYNCLITQIPE 607



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 210/430 (48%), Gaps = 17/430 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  +I      G+      +  RM+    +    +F  +   YGK   ++E  +L   M
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                CK  V ++N+++N   + G    A   Y +    K   ++ N +TF+  +   C+
Sbjct: 250 -RRSGCKADVVTYNALINCFCKFGRMETA---YGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            GLV  A++LF +M VR    + +TY  L+DG CK  RLD+A++LLDEM   G     VT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + VL++GLCK  ++  A  ++  M   G   NE+ Y TLIHG  +  N +KA+ LL  M 
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 +   YG +I GL  + +  +   +L  M+E     N  IY+T++   FK GK  
Sbjct: 426 NKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP 485

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ + +++++ G +PN              G  +EA ++  EM++ G + +   Y++L+
Sbjct: 486 EAIAMLQKILDSGFQPNN-------------GCLNEAVQLFNEMVHKGMSLDKVVYTALL 532

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+ + G  H A  +   M  +    +  CY+  I G C    + EAR V+++M+  G  
Sbjct: 533 DGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIA 592

Query: 505 PDVVAYSSMI 514
           PD   Y+ +I
Sbjct: 593 PDRAVYNCLI 602



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/332 (22%), Positives = 152/332 (45%), Gaps = 20/332 (6%)

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+++ L   G   D  R +  + E +   N    + ++  L ++       +L +++ E+
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSG----RLVRRLFEQ 182

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
              PN   ++ +ID LC+ G+  EA  +   M   GC  +  T++SL+ G+ + G+  + 
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            ++ ++M ++ C  + V Y+ LI+  C+ G++  A   +  M   G   +VV +S+ +  
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C  G V EA+KLF +M         + FTY  L++  CK   +  +I LL+ M+ +G  
Sbjct: 303 FCKEGLVREAMKLFAQMRV--RGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360

Query: 577 PDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIRL------------FKRQRTSGGFKI 622
            ++VT  + +  L  + K+   +D    + +  +R             F  + +     +
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  M  K L    S +  ++Q LC   ++  A
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDEA 452



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/309 (20%), Positives = 110/309 (35%), Gaps = 53/309 (17%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF + +  +   G  +    +  +MR     + E ++  +     KA  +++AI L   M
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 145 V---------------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEF----YNHIVNA-- 183
           V               D    +R V     VL ++ + G+    L +    + H +N   
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 184 -KHMNILP---------NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
            K + +L          +   +  +I+ +C +  +D A  L  +M     EP+   Y T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 234 MDGLCKENR----------------------LDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           MD   K  +                      L+EAV L +EM   G     V +  L++G
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 534

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
             K G L  A  L   M   G   +   Y   I G C    + +A  +   M+     P+
Sbjct: 535 YLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPD 594

Query: 332 EVTYGTIIN 340
              Y  +I 
Sbjct: 595 RAVYNCLIT 603



 Score = 39.7 bits (91), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 47/207 (22%), Positives = 84/207 (40%), Gaps = 23/207 (11%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF---IFKAYGKAHLVEE 136
           +L  S + +LIQ   N       + +L +M       LE ++I    +  A  K+  V E
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESG---LEPNYIIYTTMMDACFKSGKVPE 486

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           AI +   ++D        +  N  LN          A++ +N +V   H  +  + + + 
Sbjct: 487 AIAMLQKILDS-----GFQPNNGCLN---------EAVQLFNEMV---HKGMSLDKVVYT 529

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            ++    + G + +A  L  +M     + D++ Y   + G C  N + EA  +  EM   
Sbjct: 530 ALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGH 589

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAK 283
           G  P    +N LI  + +  ELG   K
Sbjct: 590 GIAPDRAVYNCLITQIPEIRELGGGNK 616


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 231/444 (52%), Gaps = 11/444 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +FNS+L+ + + G      E +  +   +  ++ P+ +T+ +++  +C+ GLV +A++
Sbjct: 131 VSTFNSLLSALGRAGNLRGMTELFTSM---REASVKPDIVTYGILLNRLCKAGLVGDALK 187

Query: 214 LFREM--PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM--QVDGCFPTPVTFNVLI 269
           +   M  P  +   DI    T++DGLCK  RL +A++ +DE   QV GC P  VT+N L 
Sbjct: 188 VLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLA 247

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL--DRMVASK 327
           +  C+ G++  A ++V+ M  +G  PN +T NT++ GLC  G +  A+      R    +
Sbjct: 248 DACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLE 307

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
              N VTY T+++  +          +   M ++ +  +  +Y T+ISGL + G+  DA 
Sbjct: 308 ARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDAC 367

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            +   M + G K +   Y+ LI G CR  +  EA ++  EM   G   + +TY++L+   
Sbjct: 368 NIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCL 427

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            ++G      E+  +M  + C  + V +  L+HG C+ GK  EA  ++  M     +P+ 
Sbjct: 428 CKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNT 487

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V Y+++I  LC +  V+ A+KLF+EM   E     +V TYN LL  L  ++    + +L+
Sbjct: 488 VIYNTLIDFLCKSREVDVAIKLFDEMR--ENNVPANVTTYNALLKGLQDKNMPEKAFELM 545

Query: 568 NSMMDRGCDPDLVTCNIFLTALKE 591
           + M +  C PD VT ++ +  L E
Sbjct: 546 DQMKEERCTPDYVTMDVLMEWLPE 569



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/461 (29%), Positives = 231/461 (50%), Gaps = 22/461 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  TFN ++  + R G +    +LF  M   + +PDI TY  L++ LCK   + +A+ +
Sbjct: 129 PDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKV 188

Query: 250 LDEMQVDG---CFPTPVTFNVLINGLCKNGELGRAAKLVDNMF--LKGCLPNEVTYNTLI 304
           LD M   G   C    V  N +++GLCK G L  A   VD     + GC PN VTYN L 
Sbjct: 189 LDRMSSPGSDVCADI-VILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLA 247

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER--- 361
              C  G++D A  +++RM      PN +T  TI+ GL ++GR   GA +    E+R   
Sbjct: 248 DACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRV--GAALDFFREKRTTW 305

Query: 362 -KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
            +   N   YSTL+S          AM+L+ +M ++G  P+ V+Y  +I GL + G+  +
Sbjct: 306 LEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVD 365

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  I   M   G   +   Y+ L+ GF    + H+A +++++M       +   Y+ L+ 
Sbjct: 366 ACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLS 425

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC+ G       +   M+  GC+P VV + +++HG C AG  +EALK+F  M   E + 
Sbjct: 426 CLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSM--GEARI 483

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           QP+   YN L++ LCK   +  +I L + M +     ++ T N  L  L++K   P+   
Sbjct: 484 QPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDK-NMPEKAF 542

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
           + ++++     K +R +  +  ++V+++    P+    ER+
Sbjct: 543 ELMDQM-----KEERCTPDYVTMDVLMEWL--PEIGETERL 576



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 193/419 (46%), Gaps = 31/419 (7%)

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A  L D +      P   TFN L++ L + G L    +L  +M      P+ VTY  L
Sbjct: 113 DAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGIL 172

Query: 304 IHGLCLKGNLDKAVSLLDRMVA--SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           ++ LC  G +  A+ +LDRM +  S    + V   T+++GL K+GR  D A V +    R
Sbjct: 173 LNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQD-AIVFVDERMR 231

Query: 362 KFH---VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           + H    N   Y+ L     + G  + A ++ ++M ++G  PN +  + ++ GLCRVG+ 
Sbjct: 232 QVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRV 291

Query: 419 DEAEEILFEMINNGCAA--NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
             A +   E       A  NA TYS+L+  F        A+E++ +MA      + V Y 
Sbjct: 292 GAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYF 351

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            +I GL + G+L +A  +   M   G K D  AY+ +I G C    + EA +LF EM   
Sbjct: 352 TMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMK-- 409

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
               QPDV+TYN LL+ LCK  + S   +LL +M+D GC P +VT               
Sbjct: 410 GAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVT--------------- 454

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                    L     K  +T    KI   M +  + P T  +  ++  LC+ + +  AI
Sbjct: 455 ------FGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAI 507



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 202/460 (43%), Gaps = 45/460 (9%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           STF SL+     +G+ + +  +   MR         ++  +     KA LV +A+++   
Sbjct: 132 STFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDR 191

Query: 144 MVDEFH--CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           M       C   V   N+V++ + + G    A+ F +  +   H    PNT+T+N +   
Sbjct: 192 MSSPGSDVCADIV-ILNTVVDGLCKIGRLQDAIVFVDERMRQVH-GCAPNTVTYNCLADA 249

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-------------- 247
            CR+G +D A Q+   M      P++ T  T++ GLC+  R+  A+              
Sbjct: 250 CCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEAR 309

Query: 248 -----------------------LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
                                   L  EM   G  P  V +  +I+GL + G L  A  +
Sbjct: 310 GNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNI 369

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
             +M   G   +   YN LI G C K  L +A  L + M  +   P+  TY T+++ L K
Sbjct: 370 AASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCK 429

Query: 345 LG--RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            G   AVD   +L +M +     +   + TL+ G  K GK ++A+K+++ M E   +PNT
Sbjct: 430 AGDFSAVD--ELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNT 487

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V+Y+ LID LC+  + D A ++  EM  N   AN  TY++L+KG  +     KA E+   
Sbjct: 488 VIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQ 547

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           M +  C  + V   VL+  L E G+    +    Q   +G
Sbjct: 548 MKEERCTPDYVTMDVLMEWLPEIGETERLKCFMEQRDEKG 587



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 23/184 (12%)

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           ++ L+  L   G LR    ++T M     KPD+V Y  +++ LC AG V +ALK+ + M 
Sbjct: 134 FNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMS 193

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR--GCDPDLVTCNIFLTALKEK 592
                   D+   N +++ LCK   +  +I  ++  M +  GC P+ VT N         
Sbjct: 194 SPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNC-------- 245

Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
                        LA    +        +IVE M ++ ++P   T   +V  LCR  R+ 
Sbjct: 246 -------------LADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVG 292

Query: 653 AAIN 656
           AA++
Sbjct: 293 AALD 296


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 227/456 (49%), Gaps = 6/456 (1%)

Query: 134  VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
            VEE ++L         C   V  +N +++   + G   R L     +   +    LP  +
Sbjct: 994  VEEGLKLIEARWGA-GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEM---ETNGFLPTLV 1049

Query: 194  TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            T+  +I  + + G ++    LF EM  R   P++  Y +++D LC      +A+++L +M
Sbjct: 1050 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109

Query: 254  QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
               GC P  +TFN LI GLC  G + +A   +     +   PN+++Y  LIHG C++G L
Sbjct: 1110 FASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGEL 1169

Query: 314  DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
              A  LL  M+     P+ VT+G +I+GLV  G+  +   V   M ER+   +  IY+ L
Sbjct: 1170 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVL 1229

Query: 374  ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
            ISGL K+     A  + ++M+EK  +P+  VY+ LIDG  R     +A +I   M + G 
Sbjct: 1230 ISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGV 1289

Query: 434  AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
              +  + ++++KG+ + G   +A+    +M K  C+ +E  Y+ +I G  + G L  A  
Sbjct: 1290 CPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALR 1349

Query: 494  VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
                M+ R CKP+VV YSS+I+G C  G  + A  LF  M        P+V TY IL+ +
Sbjct: 1350 WLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQA--EALSPNVVTYTILIGS 1407

Query: 554  LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            L K+  +  +     +M+   C P+ VT +  +  L
Sbjct: 1408 LFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGL 1443



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/486 (26%), Positives = 221/486 (45%), Gaps = 56/486 (11%)

Query: 153  TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
            T+ ++ S++N + ++G   +    +   +  +     PN   +N VI  +C       A+
Sbjct: 1047 TLVTYGSLINWLGKKGDLEKIGSLF---LEMRKRGFSPNVQIYNSVIDALCNCRSATQAM 1103

Query: 213  QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
             + ++M    C+PDI T+ TL+ GLC E  + +A   L E       P  +++  LI+G 
Sbjct: 1104 VILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGF 1163

Query: 273  CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            C  GEL  A+ L+  M  +G  P+ VT+  LIHGL + G + +A+ + ++M   +  P+ 
Sbjct: 1164 CMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDV 1223

Query: 333  VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
              Y  +I+GL K         +L  M E+    +E++Y+TLI G  +     DA K+++ 
Sbjct: 1224 NIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 1283

Query: 393  MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
            M  KG  P+ V  +A+I G C+ G   EA   +  M   GC  + FTY++++ G+ + G 
Sbjct: 1284 MEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1343

Query: 453  GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             + A+    DM K  C  N V YS LI+G C+ G    A  ++  M +    P+VV Y+ 
Sbjct: 1344 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTI 1403

Query: 513  MIHGL-----------------------------------------------CNAGSV-- 523
            +I  L                                               CN   V  
Sbjct: 1404 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 1463

Query: 524  EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            ++AL +  + L  +    P    YN ++ +LC+ + +  ++D  N M  +G  P+ +T  
Sbjct: 1464 KDALLVVFKKLVFD-IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPIT-- 1520

Query: 584  IFLTAL 589
             FL+ L
Sbjct: 1521 -FLSLL 1525



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 223/525 (42%), Gaps = 58/525 (11%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            T+ SLI      GD + +  +   MR+       + +  +  A        +A+ +   M
Sbjct: 1050 TYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM 1109

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                 C   + +FN+++  +  EG   +A  F    +  + +N  PN L++  +I   C 
Sbjct: 1110 FAS-GCDPDIITFNTLITGLCHEGHVRKAEHFLREAIR-RELN--PNQLSYTPLIHGFCM 1165

Query: 205  LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
             G +  A  L  EM  R   PD+ T+  L+ GL    ++ EA+++ ++M     FP    
Sbjct: 1166 RGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNI 1225

Query: 265  FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            +NVLI+GLCK   L  A  +++ M  K   P+E  Y TLI G     NL  A  + + M 
Sbjct: 1226 YNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFME 1285

Query: 325  ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 P+ V+   +I G  + G   +    + +M +     +E+ Y+T+ISG  K+G   
Sbjct: 1286 HKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLN 1345

Query: 385  DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
             A++    M+++ CKPN V YS+LI+G C+ G  D AE +   M     + N  TY+ L+
Sbjct: 1346 GALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILI 1405

Query: 445  KGFFESGKGHKAVEIWKDMAKNNC--------------------VYNEVC---------- 474
               F+  K  +A   ++ M  N+C                    V N +C          
Sbjct: 1406 GSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHGKD 1465

Query: 475  --------------------YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
                                Y+ +I  LC    LREA     +M  +G  P+ + + S++
Sbjct: 1466 ALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLL 1525

Query: 515  HGLCNAG-SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
            +G C+ G SV     L NE    + +    +F Y  L +    +S
Sbjct: 1526 YGFCSVGKSVNWRTILPNE---FQQEEFEIIFRYKFLFDQYATES 1567



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/517 (26%), Positives = 224/517 (43%), Gaps = 67/517 (12%)

Query: 188  ILPNTLTFNLVIKTVCRLGLVDNAIQL--FREMPVRNC---EPDIYTYCTLMDGLCKENR 242
            +LP+ L+   +   V  L   D A+ L  + + P  +    +P    + TL+  L +  R
Sbjct: 828  LLPSPLSDAHLAAAVSSLPDPDLAVALLSWSQSPDHHVALQDPTPLAHSTLLRLLARSRR 887

Query: 243  LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA-------------------- 282
             D     L  M + G  PT      L+      G LG+A                     
Sbjct: 888  FDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCN 947

Query: 283  ----------------KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
                            KL D M  K    +  +   L+ GLCL+  +++ + L++    +
Sbjct: 948  RLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGA 1007

Query: 327  KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
             C+P+ V Y  +I+G  + G    G  +L  ME   F      Y +LI+ L K+G  E  
Sbjct: 1008 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKI 1067

Query: 387  MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
              L+ +M ++G  PN  +Y+++ID LC      +A  IL +M  +GC  +  T+++L+ G
Sbjct: 1068 GSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITG 1127

Query: 447  FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
                G   KA    ++  +     N++ Y+ LIHG C  G+L  A  +  +M+ RG  PD
Sbjct: 1128 LCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPD 1187

Query: 507  VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
            VV + ++IHGL  AG V EAL +  +M   E +  PDV  YN+L++ LCK+  +  + ++
Sbjct: 1188 VVTFGALIHGLVVAGKVSEALIVREKM--TERQVFPDVNIYNVLISGLCKKRMLPAAKNI 1245

Query: 567  LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG-GFKIVEV 625
            L  M+++   PD                      +F+    I  F R    G   KI E 
Sbjct: 1246 LEEMLEKNVQPD----------------------EFVYATLIDGFIRSENLGDARKIFEF 1283

Query: 626  MLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
            M  K + P   +   +++  C+   +  AI  C SN+
Sbjct: 1284 MEHKGVCPDIVSCNAMIKGYCQFGMMSEAI-LCMSNM 1319


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/401 (33%), Positives = 212/401 (52%), Gaps = 14/401 (3%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFR-------EMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           L F+ +I      G   +A+Q FR        +P+R CE  +     L     +   ++ 
Sbjct: 177 LVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRL-----RPVEIER 231

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           +  L  E+   G  P    FNVL++G CK G++G A  + D +  +G  P  V++NTLI 
Sbjct: 232 SWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLIS 291

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C  G++++   L   M +    P+  T+  +INGL K GR  +G+ +   M  R    
Sbjct: 292 GCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVP 351

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   ++TLI G  K GK + A+K ++ M+ +G +P+ V Y+ALI+GLC+VG   EA  ++
Sbjct: 352 NGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLV 411

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM  +G   +  T+++L+ G  + G    A+EI + M +     ++V ++ LI GLC +
Sbjct: 412 NEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCRE 471

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G++ +A  + T MLS G KPD   Y+ +I   C  G V+   KL  EM        P V 
Sbjct: 472 GRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEM--QSDGHVPGVV 529

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           TYN L+N LCKQ  + ++  LL++M++ G  P+ +T NI L
Sbjct: 530 TYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILL 570



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 200/369 (54%), Gaps = 5/369 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P    FN+++   C+ G V NA  +F E+P R   P + ++ TL+ G CK   ++E   L
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
              M+ +G  P   TF+ LINGLCK G L   + L D M  +G +PN VT+ TLI G C 
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +D A+     M+A    P+ VTY  +INGL K+G   +  R++  M       ++  
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++TLI G  K+G  E A+++ ++M+E+G + + V ++ALI GLCR G+  +A  +L +M+
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   +  TY+ ++  F + G      ++ K+M  +  V   V Y+ L++GLC+ G+++
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMK 545

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A+M+   ML+ G  P+ + Y+ ++ G    GS  + + +FN     E     D  +Y  
Sbjct: 546 NAKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNS----EKGLVTDYASYTA 600

Query: 550 LLNALCKQS 558
           L+N   K S
Sbjct: 601 LVNESSKTS 609



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 207/432 (47%), Gaps = 44/432 (10%)

Query: 86  FYSLIQHYANSG-------------------DFKSLEMVLYRMRREKRVVLEKSF----- 121
           F +LI  Y +SG                     +  E +L R+ R + V +E+S+     
Sbjct: 179 FDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRLRPVEIERSWALYLE 238

Query: 122 ---------IFIFK----AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
                    I+ F      + KA  V  A RL    + +   + TV SFN++++   + G
Sbjct: 239 VLDSGYPPKIYFFNVLMHGFCKAGDVGNA-RLVFDEIPKRGLRPTVVSFNTLISGCCKSG 297

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
                      +   +   + P+  TF+ +I  +C+ G +D    LF EM  R   P+  
Sbjct: 298 DVEEGFRLKGVM---ESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGV 354

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
           T+ TL+DG CK  ++D A+     M   G  P  VT+N LINGLCK G+L  A +LV+ M
Sbjct: 355 TFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEM 414

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
              G  P+++T+ TLI G C  G+++ A+ +  RMV      ++V +  +I+GL + GR 
Sbjct: 415 TASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRV 474

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            D  R+L  M    F  ++  Y+ +I    K+G  +   KL K+M   G  P  V Y+AL
Sbjct: 475 HDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNAL 534

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           ++GLC+ G+   A+ +L  M+N G A N  TY+ L+ G  + G    +V++    ++   
Sbjct: 535 MNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG---SSVDVDIFNSEKGL 591

Query: 469 VYNEVCYSVLIH 480
           V +   Y+ L++
Sbjct: 592 VTDYASYTALVN 603



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 162/343 (47%), Gaps = 25/343 (7%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           ++++ +L   ++ S   P    +  +++G  K G   +   V   + +R        ++T
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LISG  K G  E+  +L   M  +G  P+   +SALI+GLC+ G+ DE   +  EM   G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  T+++L+ G  + GK   A++ ++ M       + V Y+ LI+GLC+ G L+EAR
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M + G KPD + ++++I G C  G +E AL++   M+  E   + D   +  L++
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMV--EEGIELDDVAFTALIS 466

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF- 611
            LC++  +  +  +L  M+  G  PD                      D    + I  F 
Sbjct: 467 GLCREGRVHDAGRMLTDMLSAGFKPD----------------------DPTYTMVIDCFC 504

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           K+     GFK+++ M      P   T+  ++  LC+  +++ A
Sbjct: 505 KKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNA 547


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/501 (29%), Positives = 240/501 (47%), Gaps = 6/501 (1%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SL+  Y   GD ++   V  RM+ +   V    +  +     +A  V+ A  +  TM  +
Sbjct: 179 SLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRD 238

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
              +  V ++   +    +      A   Y  +V      +LP+ +T + ++  +C+ G 
Sbjct: 239 -GVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMV---RKGVLPDVVTLSALVGGLCKDGR 294

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
              A  LFREM      P+  TYC L+D L K  R +E++ LL E+   G     + +  
Sbjct: 295 FSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTA 354

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L++ LCK G++  A  +  +       PN VTY  LI  LC  GN+D A  +L  M    
Sbjct: 355 LMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS 414

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN VT+ +IINGLVK G        +  M+ER    N   Y T+I G FK    E A+
Sbjct: 415 ISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAAL 474

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            ++ +M+ +G + N  +  +L++GL + GK ++AE +  EM   G   +   Y++L+ G 
Sbjct: 475 DVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGL 534

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
           F++G    A ++ +++ + N + + V Y+V I+ LC  GK +EA     +M S G KPD 
Sbjct: 535 FKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQ 594

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V Y++MI      G   +ALKL N M       +P++ TY+ L+  L +   +  +  LL
Sbjct: 595 VTYNTMIAAQSREGKTAKALKLLNGM--KRSSIKPNLITYSTLIVGLFEAGAVEKAKYLL 652

Query: 568 NSMMDRGCDPDLVTCNIFLTA 588
           N M   G  P  +T    L A
Sbjct: 653 NEMSSSGFSPTSLTHRRVLQA 673



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 161/609 (26%), Positives = 269/609 (44%), Gaps = 78/609 (12%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + SL+     +G+  +   ++  M+R   E  VV    FI     Y + + V++A  L+ 
Sbjct: 212 YNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIV---EYCRRNAVDDAFSLYE 268

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV +      V + ++++  + ++G +  A   +  +   + +   PN +T+ ++I T+
Sbjct: 269 EMVRKGVLPDVV-TLSALVGGLCKDGRFSEAYALFREM---EKIGAAPNHVTYCMLIDTL 324

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            +    + ++ L  E+  R    D+  Y  LMD LCKE ++DEA  +      D   P  
Sbjct: 325 AKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNG 384

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+ VLI+ LCK G +  A +++  M  K   PN VT++++I+GL  +G + KA   +  
Sbjct: 385 VTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMRE 444

Query: 323 MVASKCMPNEVTYGTII-----------------------------------NGLVKLGR 347
           M      PN VTYGT+I                                   NGL K G+
Sbjct: 445 MKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGK 504

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                 +   M ER   ++   Y+TLI GLFK G    A K+ +++ EK   P+ VVY+ 
Sbjct: 505 IEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNV 564

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
            I+ LC +GK  EAE  L EM + G   +  TY++++      GK  KA+++   M +++
Sbjct: 565 FINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSS 624

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              N + YS LI GL E G + +A+ +  +M S G  P  + +  ++   C+ G   + +
Sbjct: 625 IKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA-CSQGRRSDLI 683

Query: 528 K-----LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
                 + N  LC       D+  YN L+  LC       ++ +L  M  RG  PD +T 
Sbjct: 684 LEIHEWMMNAGLC------ADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTIT- 736

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                                N L +  FK       F   + ML   +SP  +T+  ++
Sbjct: 737 --------------------FNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLL 776

Query: 643 QELCRPKRI 651
             L    RI
Sbjct: 777 GGLESAGRI 785



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 147/598 (24%), Positives = 267/598 (44%), Gaps = 62/598 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T  +L+      G F     +   M +        ++  +     KA    E++ L   +
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V        +  + ++++ + +EG    A + + H ++  H    PN +T+ ++I  +C+
Sbjct: 341 VSRGVVMDLIM-YTALMDWLCKEGKIDEAKDMFRHALSDNHT---PNGVTYTVLIDALCK 396

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G VD A Q+  EM  ++  P++ T+ ++++GL K   + +A   + EM+  G  P  VT
Sbjct: 397 AGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVT 456

Query: 265 FNV-----------------------------------LINGLCKNGELGRAAKLVDNMF 289
           +                                     L+NGL KNG++ +A  L   M 
Sbjct: 457 YGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMN 516

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            +G L + V Y TLI GL   GNL  A  +   +     +P+ V Y   IN L  LG++ 
Sbjct: 517 ERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSK 576

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +    L  M+      ++  Y+T+I+   +EGK   A+KL   M     KPN + YS LI
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLI 636

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GL   G  ++A+ +L EM ++G +  + T+  +++   +  +    +EI + M      
Sbjct: 637 VGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLC 696

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +   Y+ L+  LC +G  R+A +V  +M  RG  PD + ++++I G   +G ++ A   
Sbjct: 697 ADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFST 756

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +++ML       P+V T+N LL  L     I  S  +LN M  RG +P  +T +I +T  
Sbjct: 757 YDQMLY--HGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGY 814

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            ++    +         A+RL+            E++ + FL P+ ST+  ++ +  +
Sbjct: 815 GKQSNKVE---------AVRLY-----------CEMVGKGFL-PKVSTYNALISDFSK 851



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 132/459 (28%), Positives = 216/459 (47%), Gaps = 27/459 (5%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP---DIYTYCTLMDGLCKENRLDEAV 247
           + +T N V+  +CR G VD A  L  E+ VR       D+  + +L+DG CK   ++ A 
Sbjct: 136 DAVTVNTVLVGLCRDGRVDRAAAL-AEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAF 194

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            + + M+  G     V +N L+ GLC+ GE+  A  +VD M   G  PN VTY   I   
Sbjct: 195 AVAERMKAQGVGVDVVGYNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEY 254

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C +  +D A SL + MV    +P+ VT   ++ GL K GR  +   +   ME+     N 
Sbjct: 255 CRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNH 314

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y  LI  L K  +  +++ L  +++ +G   + ++Y+AL+D LC+ GK DEA+++   
Sbjct: 315 VTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRH 374

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
            +++    N  TY+ L+    ++G    A ++  +M + +   N V +S +I+GL + G 
Sbjct: 375 ALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGW 434

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + +A     +M  RG  P+VV Y ++I G       E AL +++EMLC     + + F  
Sbjct: 435 VGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLC--EGVEVNKFIV 492

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           + L+N L K   I  +  L   M +RG   D V     +           DG        
Sbjct: 493 DSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLI-----------DG-------- 533

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
             LFK       FK+ + + +K L P    +   +  LC
Sbjct: 534 --LFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLC 570



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 241/533 (45%), Gaps = 59/533 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  A  KA  V+ A ++   M +E      V +F+S++N +++ G   +A ++   
Sbjct: 386 TYTVLIDALCKAGNVDGAEQVLSEM-EEKSISPNVVTFSSIINGLVKRGWVGKATDYMRE 444

Query: 180 IVNAKHMNILPNTLTFNLVI-----------------KTVC------------------R 204
           +   K   I PN +T+  VI                 + +C                  +
Sbjct: 445 M---KERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKK 501

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A  LFREM  R    D   Y TL+DGL K   L  A  +  E+      P  V 
Sbjct: 502 NGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVV 561

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NV IN LC  G+   A   ++ M   G  P++VTYNT+I     +G   KA+ LL+ M 
Sbjct: 562 YNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMK 621

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKA 383
            S   PN +TY T+I GL + G AV+ A+ L++ M    F      +  ++    +  ++
Sbjct: 622 RSSIKPNLITYSTLIVGLFEAG-AVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRS 680

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +  +++ + MM  G   +  VY+ L+  LC  G   +A  +L EM   G A +  T+++L
Sbjct: 681 DLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNAL 740

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G F+SG    A   +  M  +    N   ++ L+ GL   G++ E+ MV  +M  RG 
Sbjct: 741 ILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGI 800

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +P  + Y  ++ G     +  EA++L+ EM+       P V TYN L++   K   +S +
Sbjct: 801 EPSNLTYDILVTGYGKQSNKVEAVRLYCEMVG--KGFLPKVSTYNALISDFSKVGMMSQA 858

Query: 564 IDLLNSMMDRGCDPDLVTCNI----------------FLTALKEKLEAPQDGT 600
            +L N M +RG  P   T +I                FL  +KEK  +P  GT
Sbjct: 859 KELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGT 911



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 184/357 (51%), Gaps = 42/357 (11%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V++NV+++G  + G L   A L + M  +G   + VT NT++ GLC  G +D+A +L + 
Sbjct: 104 VSYNVVMSGFSEQGGLAPEALLAE-MCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALAEV 162

Query: 323 MVASKCMP--NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           MV    +   + V + ++++G  K+G       V   M+ +   V+   Y++L++GL + 
Sbjct: 163 MVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLCRA 222

Query: 381 GK-----------------------------------AEDAMKLWKQMMEKGCKPNTVVY 405
           G+                                    +DA  L+++M+ KG  P+ V  
Sbjct: 223 GEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTL 282

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           SAL+ GLC+ G+  EA  +  EM   G A N  TY  L+    ++ +G++++ +  ++  
Sbjct: 283 SALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVS 342

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
              V + + Y+ L+  LC++GK+ EA+ ++   LS    P+ V Y+ +I  LC AG+V+ 
Sbjct: 343 RGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDG 402

Query: 526 ALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           A ++ +EM   E KS  P+V T++ ++N L K+  +  + D +  M +RG DP++VT
Sbjct: 403 AEQVLSEM---EEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVT 456



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 195/441 (44%), Gaps = 41/441 (9%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVD 146
           SL+     +G  +  E  L+R   E+ V+L+  ++  +     K   +  A ++   + +
Sbjct: 494 SLVNGLKKNGKIEKAE-ALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTE 552

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
           +      V  +N  +N +   G    A  F   +   +   + P+ +T+N +I    R G
Sbjct: 553 KNLLPDAV-VYNVFINCLCMLGKSKEAESFLEEM---QSTGLKPDQVTYNTMIAAQSREG 608

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT-- 264
               A++L   M   + +P++ TY TL+ GL +   +++A  LL+EM   G  PT +T  
Sbjct: 609 KTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHR 668

Query: 265 ---------------------------------FNVLINGLCKNGELGRAAKLVDNMFLK 291
                                            +N L+  LC NG   +A  +++ M  +
Sbjct: 669 RVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGR 728

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+ +T+N LI G    G+LD A S  D+M+     PN  T+ T++ GL   GR  + 
Sbjct: 729 GIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGES 788

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             VL  M++R    +   Y  L++G  K+    +A++L+ +M+ KG  P    Y+ALI  
Sbjct: 789 DMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISD 848

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
             +VG   +A+E+  EM N G    + TY  L+ G+ +   G +  +  KDM +     +
Sbjct: 849 FSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPS 908

Query: 472 EVCYSVLIHGLCEDGKLREAR 492
           +   S +     + G   EAR
Sbjct: 909 KGTLSSISRAFSKPGMSWEAR 929



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 157/382 (41%), Gaps = 35/382 (9%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N+LP+ + +N+ I  +C LG    A     EM     +PD  TY T++    +E +  +A
Sbjct: 554 NLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKA 613

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT------- 299
           + LL+ M+     P  +T++ LI GL + G + +A  L++ M   G  P  +T       
Sbjct: 614 LKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA 673

Query: 300 ----------------------------YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
                                       YNTL+  LC  G   KA+ +L+ M      P+
Sbjct: 674 CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPD 733

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            +T+  +I G  K G   +       M       N   ++TL+ GL   G+  ++  +  
Sbjct: 734 TITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLN 793

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M ++G +P+ + Y  L+ G  +     EA  +  EM+  G      TY++L+  F + G
Sbjct: 794 EMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVG 853

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              +A E++ +M     +     Y +L+ G  +     E R     M  +G  P     S
Sbjct: 854 MMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLS 913

Query: 512 SMIHGLCNAGSVEEALKLFNEM 533
           S+       G   EA +L   +
Sbjct: 914 SISRAFSKPGMSWEARRLLKNL 935



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 149/345 (43%), Gaps = 38/345 (11%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++    +EG   +AL+  N +   K  +I PN +T++ +I  +   G V+ A  L 
Sbjct: 596 TYNTMIAAQSREGKTAKALKLLNGM---KRSSIKPNLITYSTLIVGLFEAGAVEKAKYLL 652

Query: 216 REMPVRNCEP-----------------------------------DIYTYCTLMDGLCKE 240
            EM      P                                   DI  Y TL+  LC  
Sbjct: 653 NEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYN 712

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
               +A+++L+EM   G  P  +TFN LI G  K+G L  A    D M   G  PN  T+
Sbjct: 713 GMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATF 772

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTL+ GL   G + ++  +L+ M      P+ +TY  ++ G  K    V+  R+   M  
Sbjct: 773 NTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVG 832

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           + F      Y+ LIS   K G    A +L+ +M  +G  P +  Y  L+ G  ++    E
Sbjct: 833 KGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTE 892

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
             + L +M   G + +  T SS+ + F + G   +A  + K++ K
Sbjct: 893 VRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 137/411 (33%), Positives = 211/411 (51%), Gaps = 8/411 (1%)

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           T   ++  K ++ S N +L+ +++E         Y  ++  +   I  N  TFN+ I  +
Sbjct: 154 TRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR---IHTNLNTFNIFINGL 210

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN---RLDEAVLLLDEMQVDGCF 259
           CR G ++ A     +M      P++ TY TL+DG CK     ++ +A   + EM  +   
Sbjct: 211 CRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKIC 270

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VTFN LI+G CK+  +  A K  + M  +G  PN VTYN+LI+GLC  G L++A+ L
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            D+MV     PN VTY  +ING  K     +  +V   + +++   N   ++T+I    K
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           EG  E+   L   M+++G  PN   Y+ LI GLCR      A+E+L EM N G   +  T
Sbjct: 391 EGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ L+ G  ++ K   A ++  +M       N V Y+ L+ G C +GKL+ A  V T+M 
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME 510

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
               +P+VV Y+ +I G C    +E A  L NEM  LE    P+  TY+I+
Sbjct: 511 KERKQPNVVTYNVLIKGYCKINKLEAANGLLNEM--LEKGLNPNRTTYDIV 559



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 215/434 (49%), Gaps = 8/434 (1%)

Query: 170 YHRALEF---YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
           Y + LE    Y     AK      +  + N ++  + +   + +   +++EM  R    +
Sbjct: 140 YVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTN 199

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG---RAAK 283
           + T+   ++GLC+  +L++A   +++M+  G  P  VT+N L++G CK G  G   +A  
Sbjct: 200 LNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEA 259

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
            +  M      PNEVT+NTLI G C   N+  A    + M      PN VTY ++INGL 
Sbjct: 260 FMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLC 319

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
             G+  +   +   M       N   Y+ LI+G  K+   ++A K++  + ++   PN +
Sbjct: 320 NNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVI 379

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            ++ +ID  C+ G  +E   +   M++ G   N  TY+ L+ G         A E+  +M
Sbjct: 380 TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEM 439

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
                  + V Y++LI GLC++ K R A  +  +M + G KP+ V Y++++ G C  G +
Sbjct: 440 ENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKL 499

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           + AL +   M   + + QP+V TYN+L+   CK + +  +  LLN M+++G +P+  T +
Sbjct: 500 KAALNVRTRM--EKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYD 557

Query: 584 IFLTALKEKLEAPQ 597
           I    + EK  +P 
Sbjct: 558 IVRLEMLEKGFSPD 571



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 180/381 (47%), Gaps = 32/381 (8%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +   +  ++T+VD + CKR               G  ++A  F   ++  K   I 
Sbjct: 227 KAWGISPNVVTYNTLVDGY-CKRG------------SAGKMYKAEAFMKEMLANK---IC 270

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +TFN +I   C+   V  A + F EM  +  +P+I TY +L++GLC   +L+EA+ L
Sbjct: 271 PNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDL 330

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M   G  P  VT+N LING CK   +  A K+ D++  +  +PN +T+NT+I   C 
Sbjct: 331 WDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCK 390

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G +++  SL   M+    +PN  TY  +I GL +         +L  ME +    +   
Sbjct: 391 EGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVT 450

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI GL K  K+ +A KL  +M   G KPN V Y+ L+DG C  GK   A  +   M 
Sbjct: 451 YNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRME 510

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                 N  TY+ L+KG+ +  K   A  +  +M +     N   Y +            
Sbjct: 511 KERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDI------------ 558

Query: 490 EARMVWTQMLSRGCKPDVVAY 510
               V  +ML +G  PD+  +
Sbjct: 559 ----VRLEMLEKGFSPDIEGH 575



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/416 (28%), Positives = 202/416 (48%), Gaps = 59/416 (14%)

Query: 289 FLKGCLPNEV-TYNTLIHGLCLKGNLDKAVSLLDRMV------------ASKCMPNEVTY 335
           FL   + NE  T +++ H L L G    A +L+  M+            A +       Y
Sbjct: 100 FLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDY 159

Query: 336 G---------TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK---A 383
           G          +++ LVK  +  D   V   M +R+ H N   ++  I+GL + GK   A
Sbjct: 160 GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219

Query: 384 EDA---MKLWKQMMEKGCKPNTVVYSALIDGLCR---VGKPDEAEEILFEMINNGCAANA 437
           EDA   MK W      G  PN V Y+ L+DG C+    GK  +AE  + EM+ N    N 
Sbjct: 220 EDAIEDMKAW------GISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNE 273

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            T+++L+ GF +      A + +++M K     N V Y+ LI+GLC +GKL EA  +W +
Sbjct: 274 VTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDK 333

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M+  G KP++V Y+++I+G C    ++EA K+F+++   + +  P+V T+N +++A CK+
Sbjct: 334 MVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVS--KQELVPNVITFNTMIDAYCKE 391

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIR------ 609
             +     L +SM+D G  P++ T N  +  L  K+ L+A ++    LNE+  +      
Sbjct: 392 GMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKE---LLNEMENKGLKGDV 448

Query: 610 ---------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                    L K  ++    K++  M    L P   T+  ++   C   +++AA+N
Sbjct: 449 VTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALN 504



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 109/254 (42%), Gaps = 39/254 (15%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +      K    V   + +++ V    +F  +  AY K  ++EE   L  +M
Sbjct: 345 TYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSM 404

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +DE                                        ILPN  T+N +I  +CR
Sbjct: 405 LDE---------------------------------------GILPNVSTYNCLIAGLCR 425

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +  A +L  EM  +  + D+ TY  L+DGLCK ++   A  LL+EM   G  P  VT
Sbjct: 426 KQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVT 485

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L++G C  G+L  A  +   M  +   PN VTYN LI G C    L+ A  LL+ M+
Sbjct: 486 YNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEML 545

Query: 325 ASKCMPNEVTYGTI 338
                PN  TY  +
Sbjct: 546 EKGLNPNRTTYDIV 559



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 21/187 (11%)

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           L+  L ++ K+ +   V+ +M+ R    ++  ++  I+GLC AG + +A     +M    
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAW- 229

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               P+V TYN L++  CK                RG    +     F+  +      P 
Sbjct: 230 -GISPNVVTYNTLVDGYCK----------------RGSAGKMYKAEAFMKEMLANKICPN 272

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
           + T   N L     K +  +   K  E M ++ L P   T+  ++  LC   +++ AI+ 
Sbjct: 273 EVT--FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAID- 329

Query: 658 CWSNLYG 664
            W  + G
Sbjct: 330 LWDKMVG 336


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 206/389 (52%), Gaps = 8/389 (2%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T TFN++++ +C  G    A++L R+MP     P+  TY T++ G C   R+  A+ ++ 
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 252 EM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLCL 309
           EM +  G  P   T+  +I+G CK G +  A K+ D M  KG + P  V YN LI G C 
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G LD A+   DRMV         TY  +++ L   GR  +   ++  M  +    + + 
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI+G  KEG  + A+++++ M  +G +   V Y+ALI  L + G+  E +++  E +
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +   Y++L+     SG   +A EI  +M K     ++V Y+ L+ GLC  G++ 
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 778

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EAR +  +M  RG +PD+V Y+++I G    G V++AL++ NEM+       P + TYN 
Sbjct: 779 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM--NKGFNPTLLTYNA 836

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           L+  LCK      + +++  M++ G  PD
Sbjct: 837 LIQGLCKNGQGDDAENMVKEMVENGITPD 865



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 200/404 (49%), Gaps = 11/404 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN +L  +   G   RALE    +         PN +T+N VI   C  G V  A+ + 
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPR-------PNAVTYNTVIAGFCSRGRVQAALDIM 537

Query: 216 REMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPVTFNVLINGLC 273
           REM  R    P+ YTY T++ G CK  R+DEAV + DEM   G   P  V +N LI G C
Sbjct: 538 REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 597

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G+L  A    D M  +G      TYN L+H L + G   +A  L++ M      P+  
Sbjct: 598 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 657

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +ING  K G       +  +M  R        Y+ LI  L K+G+ ++  KL+ + 
Sbjct: 658 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 717

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + +G +P+ V+Y+ALI+     G  D A EI+ EM     A +  TY++LM+G    G+ 
Sbjct: 718 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 777

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A ++  +M +     + V Y+ LI G    G +++A  +  +M+++G  P ++ Y+++
Sbjct: 778 DEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 837

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           I GLC  G  ++A  +  EM  +E    PD  TY  L+  L  +
Sbjct: 838 IQGLCKNGQGDDAENMVKEM--VENGITPDDSTYISLIEGLTTE 879



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 199/387 (51%), Gaps = 29/387 (7%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TFN+++  LC  G+  RA +L+  M      PN VTYNT+I G C +G +  A+ ++  
Sbjct: 484 TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 539

Query: 323 MVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSMEER-KFHVNEYIYSTLISGLFKE 380
           M     + PN+ TYGT+I+G  K+GR  +  +V   M  + +      +Y+ LI G   +
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK + A+    +M+E+G       Y+ L+  L   G+  EA E++ EM   G A + FTY
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+ G  + G   KA+EI+++M++       V Y+ LI+ L + G+++E   ++ + + 
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           RG +PD+V Y+++I+    +G+++ A ++  EM   + +  PD  TYN L+  LC    +
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME--KKRIAPDDVTYNTLMRGLCLLGRV 777

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  L++ M +RG  PDLVT N  ++    K        D  + L IR           
Sbjct: 778 DEARKLIDEMTERGIQPDLVTYNTLISGYSMK-------GDVKDALRIR----------- 819

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCR 647
                M+ K  +P   T+  ++Q LC+
Sbjct: 820 ---NEMMNKGFNPTLLTYNALIQGLCK 843



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 190/364 (52%), Gaps = 4/364 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ ++I  + + G  ++   ++  MR    +   + ++  +   + K   V+EA+++F  
Sbjct: 516 TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 575

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ +   K     +N+++     +G    AL + + +V      +     T+NL++  + 
Sbjct: 576 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV---ERGVAMTVATYNLLVHALF 632

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G    A +L  EM  +   PD++TY  L++G CKE  + +A+ + + M   G   T V
Sbjct: 633 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 692

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  LI  L K G++    KL D    +G  P+ V YN LI+     GN+D+A  ++  M
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              +  P++VTY T++ GL  LGR  +  +++  M ER    +   Y+TLISG   +G  
Sbjct: 753 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 812

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +DA+++  +MM KG  P  + Y+ALI GLC+ G+ D+AE ++ EM+ NG   +  TY SL
Sbjct: 813 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 872

Query: 444 MKGF 447
           ++G 
Sbjct: 873 IEGL 876



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 153/303 (50%), Gaps = 26/303 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ ++  L   GK   A++L +QM     +PN V Y+ +I G C  G+   A +I+ EM 
Sbjct: 486 FNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 541

Query: 430 N-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE-VCYSVLIHGLCEDGK 487
              G A N +TY +++ G+ + G+  +AV+++ +M     V  E V Y+ LI G C+ GK
Sbjct: 542 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 601

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           L  A +   +M+ RG    V  Y+ ++H L   G   EA +L  EM        PDVFTY
Sbjct: 602 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG--KGLAPDVFTY 659

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           NIL+N  CK+ N+  ++++  +M  RG    +VT    + AL +K +  +  TD L + A
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQE--TDKLFDEA 717

Query: 608 IR------------LFKRQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           +R            L     TSG     F+I+  M +K ++P   T+  +++ LC   R+
Sbjct: 718 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 777

Query: 652 QAA 654
             A
Sbjct: 778 DEA 780



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 10/298 (3%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +LI  Y + G   +   +LYR R  +R V     +  +     A  ++      + +V
Sbjct: 589 YNALIGGYCDQGKLDT--ALLYRDRMVERGV--AMTVATYNLLVHALFMDGRGTEAYELV 644

Query: 146 DEFHCK---RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +E   K     V ++N ++N   +EG   +ALE +    N     +    +T+  +I  +
Sbjct: 645 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE---NMSRRGVRATVVTYTALIYAL 701

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            + G V    +LF E   R   PD+  Y  L++       +D A  ++ EM+     P  
Sbjct: 702 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 761

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N L+ GLC  G +  A KL+D M  +G  P+ VTYNTLI G  +KG++  A+ + + 
Sbjct: 762 VTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 821

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           M+     P  +TY  +I GL K G+  D   ++  M E     ++  Y +LI GL  E
Sbjct: 822 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 27/218 (12%)

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ +++    +GK  +A+E+ + M + N V     Y+ +I G C  G+++ A  +  +M
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 540

Query: 499 LSRG-CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
             RG   P+   Y ++I G C  G V+EA+K+F+EML  + + +P+   YN L+   C Q
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKPEAVMYNALIGGYCDQ 599

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
             +  ++   + M++RG    + T N+ + AL                     F   R +
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHAL---------------------FMDGRGT 638

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             +++VE M  K L+P   T+  ++   C+   ++ A+
Sbjct: 639 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 676



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 92/232 (39%), Gaps = 47/232 (20%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  +   G+ K    +   M R        ++  +  A  K   V+E  +LF   
Sbjct: 658 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEA 717

Query: 145 VDEFHCKRTVKS----FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           V     +R ++     +N+++N     G   RA E    +   +   I P+ +T+N +++
Sbjct: 718 V-----RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR---IAPDDVTYNTLMR 769

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM-------------------------- 234
            +C LG VD A +L  EM  R  +PD+ TY TL+                          
Sbjct: 770 GLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNP 829

Query: 235 ---------DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
                     GLCK  + D+A  ++ EM  +G  P   T+  LI GL    E
Sbjct: 830 TLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 881


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 224/457 (49%), Gaps = 8/457 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  AY    L+EEA  L H M  +      V ++N+V+N + + G Y RA E +  ++ +
Sbjct: 266 LISAYSSQGLMEEAFELMHAMPSKGFSP-GVYTYNTVINGLCKHGKYERAKEVFAEMLRS 324

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               + P++ T+  ++   C+ G       +F +M  R+  PD+  + ++M    +   L
Sbjct: 325 ---GLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 381

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A++  + ++  G  P  V + +LI G C+ G +  A  L + M  +GC  + VTYNT+
Sbjct: 382 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTI 441

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +HGLC +  L +A  L + M      P+  T   +I+G  KLG   +   +   M+E++ 
Sbjct: 442 LHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRI 501

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            ++   Y+TL+ G  K G  + A ++W  M+ K   P  + +S L++ LC  G   EA  
Sbjct: 502 KLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFR 561

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EMI+          +S++KG+  SG         + M     V + + Y+ LI+G  
Sbjct: 562 VWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFV 621

Query: 484 EDGKLREARMVWTQMLSR--GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           ++  + +A  +  +M  +  G  PDV  Y+S++HG C    ++EA  +  +M+  E    
Sbjct: 622 KEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMI--ERGVN 679

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           PD  TY  L+N    Q N++ +    + M+ RG  PD
Sbjct: 680 PDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/534 (25%), Positives = 247/534 (46%), Gaps = 39/534 (7%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           DS F  LI+ +  +   +        +R +   V   +   +  +  +   VE A R++ 
Sbjct: 155 DSVFDLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQ 214

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             +        V + N ++N + ++G   +   F + +   +   + P+ +T+N +I   
Sbjct: 215 E-ISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEV---QEKGVYPDIVTYNTLISAY 270

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
              GL++ A +L   MP +   P +YTY T+++GLCK  + + A  +  EM   G  P  
Sbjct: 271 SSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 330

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+  L+   CK G+      +  +M  +  +P+ V +++++      GNLDKA+   + 
Sbjct: 331 TTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 390

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           +  +  +P+ V Y  +I G  + G   +   +   M ++   ++   Y+T++ GL K   
Sbjct: 391 VKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKM 450

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             +A KL+ +M E+G  P++   + LIDG C++G    A E+  +M       +  TY++
Sbjct: 451 LGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNT 510

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ GF + G    A EIW DM     +   + +S+L++ LC  G L EA  VW +M+S+ 
Sbjct: 511 LLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKS 570

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--------------------------- 535
            KP V+  +SMI G C +G+  +      +M+                            
Sbjct: 571 IKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAF 630

Query: 536 -----LEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
                +E K     PDVFTYN +L+  C+++ +  +  +L  M++RG +PD  T
Sbjct: 631 GLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRST 684



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/503 (26%), Positives = 232/503 (46%), Gaps = 43/503 (8%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  + + + +A  + EA   F T++       ++ + N+++  +++ G    A   Y  I
Sbjct: 158 FDLLIRTFVQARKLREAYEAF-TLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEI 216

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
             +    +  N  T N+++  +C+ G ++       E+  +   PDI TY TL+     +
Sbjct: 217 SRS---GVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQ 273

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             ++EA  L+  M   G  P   T+N +INGLCK+G+  RA ++   M   G  P+  TY
Sbjct: 274 GLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 333

Query: 301 NTLIHGLCLK-----------------------------------GNLDKAVSLLDRMVA 325
            +L+   C K                                   GNLDKA+   + +  
Sbjct: 334 RSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE 393

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +  +P+ V Y  +I G  + G   +   +   M ++   ++   Y+T++ GL K     +
Sbjct: 394 AGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGE 453

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A KL+ +M E+G  P++   + LIDG C++G    A E+  +M       +  TY++L+ 
Sbjct: 454 ADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLD 513

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           GF + G    A EIW DM     +   + +S+L++ LC  G L EA  VW +M+S+  KP
Sbjct: 514 GFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKP 573

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
            V+  +SMI G C +G+  +      +M  +     PD  +YN L+    K+ N+S +  
Sbjct: 574 TVMICNSMIKGYCRSGNASDGEIFLEKM--ISEGFVPDCISYNTLIYGFVKEENMSKAFG 631

Query: 566 LLNSMMDR--GCDPDLVTCNIFL 586
           L+  M ++  G  PD+ T N  L
Sbjct: 632 LVKKMEEKQGGLVPDVFTYNSIL 654



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 131/271 (48%), Gaps = 11/271 (4%)

Query: 66  SDEIFNSTPKLGSYQLGDS-TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIF 123
           +D++FN   + G +   DS T   LI  +   G+ ++  M L++  +EKR+ L+  ++  
Sbjct: 454 ADKLFNEMTERGLFP--DSYTLTILIDGHCKLGNLQN-AMELFKKMKEKRIKLDVVTYNT 510

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   +GK   ++ A  ++  MV +     T  SF+ ++N +  +G    A   ++ +++ 
Sbjct: 511 LLDGFGKVGDIDTAKEIWADMVSK-EILPTPISFSILVNALCSKGHLSEAFRVWDEMISK 569

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
              +I P  +  N +IK  CR G   +      +M      PD  +Y TL+ G  KE  +
Sbjct: 570 ---SIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENM 626

Query: 244 DEAVLLLDEMQ--VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            +A  L+ +M+    G  P   T+N +++G C+  ++  A  ++  M  +G  P+  TY 
Sbjct: 627 SKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYT 686

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           +LI+G   + NL +A    D M+     P++
Sbjct: 687 SLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 140/540 (25%), Positives = 258/540 (47%), Gaps = 42/540 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++  F     +L R+R    +    SF  I    GK   V+EA+ LF  M
Sbjct: 318 AYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM 377

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +   K  + ++N +++++   G  + A +  + +  A    + PN L+ N+++  +C+
Sbjct: 378 KKD--AKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELA---GLFPNLLSVNIMVDRLCK 432

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              ++ A ++F     R C P+  TYC+L+DGL K+ ++D+A  L ++M   G    P+ 
Sbjct: 433 ANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPII 492

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI     +G      K+   M  +G  P+    NT +  +   G ++K  ++ + M 
Sbjct: 493 YTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMK 552

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +   +P+  +Y  +I+GL K G+A + + +  +M ++ F ++   Y+ ++ GL K GK +
Sbjct: 553 SFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVD 612

Query: 385 DAMKLWKQM-----------------------------------MEKGCKPNTVVYSALI 409
            A ++ ++M                                     KG + N ++YS+LI
Sbjct: 613 KAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLI 672

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  IL EM+  G   N +T++SLM    ++ +  +A+  ++ M +  C 
Sbjct: 673 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCS 732

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N   YS+LI+GLC   K  +A + W +M  +G  P+VV Y++MI GL   G++ +A  L
Sbjct: 733 PNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSL 792

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F           PD  ++N L+  +   +    +  +      RGC  ++ TC   L AL
Sbjct: 793 FERFKT--NGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDAL 850



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 166/646 (25%), Positives = 290/646 (44%), Gaps = 46/646 (7%)

Query: 57  GNAKSEQPFSDEIFNST-PKLG----------------SYQLGDSTFYSLIQHYANSGDF 99
            +A S QP   + +N+  P L                  Y L +    +L+     S   
Sbjct: 98  ASASSSQPLPPDAYNAVLPFLSHDLAALEKVLEEMSHLGYGLPNPACAALVATLVRSRRL 157

Query: 100 KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNS 159
           +    V+  MR  K      ++  +  A  +A   E A+ L   M D  + + +V  F +
Sbjct: 158 EDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGY-EVSVPLFTT 216

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           ++  + +EG    AL   + +   K   + P+ + +N+ I    + G VD A + F E+ 
Sbjct: 217 LVRALAREGQMEPALALVDEV---KGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELK 273

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                PD  +Y +++  LCK  RL EA  L  +M+ +   P    +N +I G        
Sbjct: 274 AHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFD 333

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A KL++ +  +GC+P+ V++N+++  L  K  +D+A++L D M      PN  TY  II
Sbjct: 334 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIII 392

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           + L   GR  +  ++   ME      N    + ++  L K  + E+A ++++   E+GC 
Sbjct: 393 DMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCN 452

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN+V Y +LIDGL + GK D+A  +  +M++ G  AN   Y+SL++ FF  G+     +I
Sbjct: 453 PNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKI 512

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           +K+M +     +    +  +  + + G++ + R ++  M S G  PDV +YS +IHGL  
Sbjct: 513 YKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTK 572

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           AG   E   +F  M   +     D   YN +++ LCK   +  + ++L  M  +   P +
Sbjct: 573 AGQARETSNIFQAMS--QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTV 630

Query: 580 VTCNIFLTALK--EKL--------EAPQDGTDF----LNELAIRLFKRQRTSGGFKIVEV 625
            T    +  L   ++L        EA   G +      + L     K  R    + I+E 
Sbjct: 631 ATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEE 690

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAI--------NKCWSNLY 663
           M++K L+P   TW  ++  L + + I  A+         KC  N Y
Sbjct: 691 MMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTY 736



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 154/601 (25%), Positives = 283/601 (47%), Gaps = 38/601 (6%)

Query: 59  AKSEQP-FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL 117
           A++ QP  + E+      +G Y++    F +L++  A  G    +E  L  +   K   L
Sbjct: 187 AEARQPERALELLRQMQDVG-YEVSVPLFTTLVRALAREG---QMEPALALVDEVKGSCL 242

Query: 118 EKSFIFI---FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK-SFNSVLNVIIQEGLYHRA 173
           E   +        +GKA  V+ A + FH +  + H  R    S+ S++ V+ + G    A
Sbjct: 243 EPDIVLYNVCIDCFGKAGSVDMAWKFFHEL--KAHGLRPDDVSYTSMVWVLCKAGRLGEA 300

Query: 174 LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTL 233
            E +  +   +    +P    +N +I         D+A +L   +  R C P + ++ ++
Sbjct: 301 EELFGQMEAERD---VPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSI 357

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +  L K+ ++DEA+ L D M+ D   P   T+N++I+ LC  G +  A K+ D M L G 
Sbjct: 358 LTCLGKKRKVDEALTLFDVMKKDAK-PNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGL 416

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
            PN ++ N ++  LC    L++A  + +      C PN VTY ++I+GL K G+  D  R
Sbjct: 417 FPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYR 476

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   M +     N  IY++LI   F  G+ ED  K++K+M+ +G +P+  + +  +D + 
Sbjct: 477 LFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVF 536

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           + G+ ++   I  +M + G   +  +YS L+ G  ++G+  +   I++ M++     +  
Sbjct: 537 KAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDAR 596

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y+ ++ GLC+ GK+ +A  V  +M  +   P V  Y S++ GL     ++EA  LF E 
Sbjct: 597 AYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEE- 655

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
                  + +V  Y+ L++   K   I  +  +L  MM +G  P++ T N  + AL +  
Sbjct: 656 -AKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVK-- 712

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                 T+ ++E  I               + M +   SP T T+  ++  LCR ++   
Sbjct: 713 ------TEEIDEALI-------------CFQSMKEMKCSPNTYTYSILINGLCRVQKYNK 753

Query: 654 A 654
           A
Sbjct: 754 A 754



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 202/432 (46%), Gaps = 39/432 (9%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA+ +EEA R+F +   E  C     ++ S+++ + ++G    A   +  +++A H    
Sbjct: 432 KANQLEEAHRIFES-ASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHD--- 487

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            N + +  +I+     G  ++  ++++EM  R   PD+    T MD + K   +++   +
Sbjct: 488 ANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAI 547

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            ++M+  G  P   ++++LI+GL K G+    + +   M  +G   +   YN ++ GLC 
Sbjct: 548 FEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCK 607

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +DKA  +L+ M      P   TYG+I++GL K+ R  +   +    + +   +N  +
Sbjct: 608 SGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVIL 667

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKG-------------------------------- 397
           YS+LI G  K G+ ++A  + ++MM+KG                                
Sbjct: 668 YSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMK 727

Query: 398 ---CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
              C PNT  YS LI+GLCRV K ++A     EM   G   N  TY++++ G  + G   
Sbjct: 728 EMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNIT 787

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A  +++    N  + +   ++ LI G+    +  EA  V+ +   RGC+ +V    S++
Sbjct: 788 DAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLL 847

Query: 515 HGLCNAGSVEEA 526
             L     +E+A
Sbjct: 848 DALNKTECLEQA 859



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 127/304 (41%), Gaps = 36/304 (11%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           +  IF +  + G + L    + +++     SG       VL  M+ +       ++  I 
Sbjct: 579 TSNIFQAMSQQG-FALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIV 637

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH------RALEFYNH 179
               K   ++EA  LF             KS    LNVI+   L        R  E Y  
Sbjct: 638 DGLAKIDRLDEAYMLFEE----------AKSKGIELNVILYSSLIDGFGKVGRIDEAYLI 687

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +       + PN  T+N ++  + +   +D A+  F+ M    C P+ YTY  L++GLC+
Sbjct: 688 LEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCR 747

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             + ++A +   EMQ  G  P  VT+  +I+GL K G +  A  L +     G +P+  +
Sbjct: 748 VQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSAS 807

Query: 300 YNTLIHGLC----------------LKG---NLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           +N LI G+                 L+G   N+   +SLLD +  ++C+      G +++
Sbjct: 808 FNALIEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQAAIVGAVLS 867

Query: 341 GLVK 344
            + K
Sbjct: 868 EIAK 871


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 206/389 (52%), Gaps = 8/389 (2%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T TFN++++ +C  G    A++L R+MP     P+  TY T++ G C   R+  A+ ++ 
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 96

Query: 252 EM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLCL 309
           EM +  G  P   T+  +I+G CK G +  A K+ D M  KG + P  V YN LI G C 
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G LD A+   DRMV         TY  +++ L   GR  +   ++  M  +    + + 
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI+G  KEG  + A+++++ M  +G +   V Y++LI  L + G+  E +++  E +
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +   Y++L+     SG   +A EI  +M K     ++V Y+ L+ GLC  G++ 
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 336

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EAR +  +M  RG +PD+V Y+++I G    G V++AL++ NEM+       P + TYN 
Sbjct: 337 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMM--NKGFNPTLLTYNA 394

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           L+  LCK      + +++  M++ G  PD
Sbjct: 395 LIQGLCKNGQGDDAENMVKEMVENGITPD 423



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 201/405 (49%), Gaps = 11/405 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN +L  +   G   RALE    +         PN +T+N VI   C  G V  A+ + 
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMPR-------PNAVTYNTVIAGFCSRGRVQAALDIM 95

Query: 216 REMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPVTFNVLINGLC 273
           REM  R    P+ YTY T++ G CK  R+DEAV + DEM   G   P  V +N LI G C
Sbjct: 96  REMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYC 155

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G+L  A    D M  +G      TYN L+H L + G   +A  L++ M      P+  
Sbjct: 156 DQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVF 215

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +ING  K G       +  +M  R        Y++LI  L K+G+ ++  KL+ + 
Sbjct: 216 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEA 275

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + +G +P+ V+Y+ALI+     G  D A EI+ EM     A +  TY++LM+G    G+ 
Sbjct: 276 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 335

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A ++  +M K     + V Y+ LI G    G +++A  +  +M+++G  P ++ Y+++
Sbjct: 336 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNAL 395

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           I GLC  G  ++A  +  EM  +E    PD  TY  L+  L  + 
Sbjct: 396 IQGLCKNGQGDDAENMVKEM--VENGITPDDSTYISLIEGLTTED 438



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 198/387 (51%), Gaps = 29/387 (7%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TFN+++  LC  G+  RA +L+  M      PN VTYNT+I G C +G +  A+ ++  
Sbjct: 42  TTFNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMRE 97

Query: 323 MVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSMEER-KFHVNEYIYSTLISGLFKE 380
           M     + PN+ TYGT+I+G  K+GR  +  +V   M  + +      +Y+ LI G   +
Sbjct: 98  MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           GK + A+    +M+E+G       Y+ L+  L   G+  EA E++ EM   G A + FTY
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+ G  + G   KA+EI+++M++       V Y+ LI+ L + G+++E   ++ + + 
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           RG +PD+V Y+++I+    +G+++ A ++  EM   + +  PD  TYN L+  LC    +
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME--KKRIAPDDVTYNTLMRGLCLLGRV 335

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  L++ M  RG  PDLVT N  ++    K        D  + L IR           
Sbjct: 336 DEARKLIDEMTKRGIQPDLVTYNTLISGYSMK-------GDVKDALRIR----------- 377

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCR 647
                M+ K  +P   T+  ++Q LC+
Sbjct: 378 ---NEMMNKGFNPTLLTYNALIQGLCK 401



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 190/364 (52%), Gaps = 4/364 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ ++I  + + G  ++   ++  MR    +   + ++  +   + K   V+EA+++F  
Sbjct: 74  TYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDE 133

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ +   K     +N+++     +G    AL + + +V      +     T+NL++  + 
Sbjct: 134 MLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMV---ERGVAMTVATYNLLVHALF 190

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G    A +L  EM  +   PD++TY  L++G CKE  + +A+ + + M   G   T V
Sbjct: 191 MDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVV 250

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  LI  L K G++    KL D    +G  P+ V YN LI+     GN+D+A  ++  M
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 310

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              +  P++VTY T++ GL  LGR  +  +++  M +R    +   Y+TLISG   +G  
Sbjct: 311 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 370

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +DA+++  +MM KG  P  + Y+ALI GLC+ G+ D+AE ++ EM+ NG   +  TY SL
Sbjct: 371 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 430

Query: 444 MKGF 447
           ++G 
Sbjct: 431 IEGL 434



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 153/303 (50%), Gaps = 26/303 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ ++  L   GK   A++L +QM     +PN V Y+ +I G C  G+   A +I+ EM 
Sbjct: 44  FNIMLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 99

Query: 430 N-NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE-VCYSVLIHGLCEDGK 487
              G A N +TY +++ G+ + G+  +AV+++ +M     V  E V Y+ LI G C+ GK
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 159

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           L  A +   +M+ RG    V  Y+ ++H L   G   EA +L  EM        PDVFTY
Sbjct: 160 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGG--KGLAPDVFTY 217

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           NIL+N  CK+ N+  ++++  +M  RG    +VT    + AL +K +  +  TD L + A
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQE--TDKLFDEA 275

Query: 608 IR------------LFKRQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           +R            L     TSG     F+I+  M +K ++P   T+  +++ LC   R+
Sbjct: 276 VRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRV 335

Query: 652 QAA 654
             A
Sbjct: 336 DEA 338



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 10/298 (3%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +LI  Y + G   +   +LYR R  +R V     +  +     A  ++      + +V
Sbjct: 147 YNALIGGYCDQGKLDT--ALLYRDRMVERGV--AMTVATYNLLVHALFMDGRGTEAYELV 202

Query: 146 DEFHCKR---TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +E   K     V ++N ++N   +EG   +ALE +    N     +    +T+  +I  +
Sbjct: 203 EEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFE---NMSRRGVRATVVTYTSLIYAL 259

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            + G V    +LF E   R   PD+  Y  L++       +D A  ++ EM+     P  
Sbjct: 260 SKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDD 319

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N L+ GLC  G +  A KL+D M  +G  P+ VTYNTLI G  +KG++  A+ + + 
Sbjct: 320 VTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNE 379

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           M+     P  +TY  +I GL K G+  D   ++  M E     ++  Y +LI GL  E
Sbjct: 380 MMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 106/218 (48%), Gaps = 27/218 (12%)

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ +++    +GK  +A+E+ + M + N V     Y+ +I G C  G+++ A  +  +M
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 98

Query: 499 LSRG-CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
             RG   P+   Y ++I G C  G V+EA+K+F+EML  + + +P+   YN L+   C Q
Sbjct: 99  RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLT-KGEVKPEAVMYNALIGGYCDQ 157

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
             +  ++   + M++RG    + T N+ + AL                     F   R +
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHAL---------------------FMDGRGT 196

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             +++VE M  K L+P   T+  ++   C+   ++ A+
Sbjct: 197 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKAL 234



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 98/235 (41%), Gaps = 53/235 (22%)

Query: 85  TFYSLIQHYANSGDFK-SLEMVLYRMRREKR--VVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  LI  +   G+ K +LE+     RR  R  VV   S I+     G+   V+E  +LF
Sbjct: 216 TYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQ---VQETDKLF 272

Query: 142 HTMVDEFHCKRTVKS----FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
              V     +R ++     +N+++N     G   RA E    +   +   I P+ +T+N 
Sbjct: 273 DEAV-----RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKR---IAPDDVTYNT 324

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM----------------------- 234
           +++ +C LG VD A +L  EM  R  +PD+ TY TL+                       
Sbjct: 325 LMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKG 384

Query: 235 ------------DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
                        GLCK  + D+A  ++ EM  +G  P   T+  LI GL    E
Sbjct: 385 FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTEDE 439


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  222 bits (566), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 221/422 (52%), Gaps = 5/422 (1%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
           H A+  +  +V  +     P+ + FN ++  + ++   D  I L ++M V     D+YT+
Sbjct: 67  HDAINLFREMVKTRP---FPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTF 123

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             +++  C   ++  A+ +L +M   G  P  VT   L+NG C+   +  A  LVD M  
Sbjct: 124 NIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            G  P+ V YN +I  LC    ++ A+     +      PN VTY  ++NGL   GR  D
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
            AR+L  M +RK   N   YS L+    K GK  +A +++++M+     P+ V YS+LI+
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC   + DEA ++   M++ GC  +  +Y++L+ GF ++ +    +++++ M++   V 
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVN 363

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N V Y+ LI G  + G + +A+  ++QM S G  PD+  Y+ ++ GLC+ G +E+AL +F
Sbjct: 364 NTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIF 423

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
            +M   + +   D+ TY  ++  +CK   +  +  L  S+  +G  PD+VT    ++ L 
Sbjct: 424 EDM--QKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 591 EK 592
            K
Sbjct: 482 TK 483



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 208/391 (53%), Gaps = 8/391 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T   ++   CR   V +A+ L  +M      PDI  Y  ++D LCK  R+++A+  
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDF 212

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             E+   G  P  VT+  L+NGLC +G    AA+L+ +M  +   PN +TY+ L+     
Sbjct: 213 FKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVK 272

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G + +A  + + MV     P+ VTY ++INGL    R  +  ++   M  +    +   
Sbjct: 273 NGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVS 332

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  K  + ED MKL+++M ++G   NTV Y+ LI G  +VG  D+A+E   +M 
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMD 392

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G + + +TY+ L+ G  ++G   KA+ I++DM K+    + V Y+ +I G+C+ GK+ 
Sbjct: 393 SFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVE 452

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  ++  +  +G KPD+V Y++M+ GLC  G   E   L+ +M       Q  +   + 
Sbjct: 453 DAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKM------KQEGLMKNDS 506

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           +L       +I+ S +L+  M+  G  P L+
Sbjct: 507 ML--CLGDGDITISAELIKKMLSCGYAPSLL 535



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 215/416 (51%), Gaps = 23/416 (5%)

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           ++ +L +A+ L  EM     FP+ V FN L++ + K  +      L   M + G   +  
Sbjct: 62  RDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLY 121

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T+N +I+  C    +  A+S+L +M+     P+ VT G+++NG  +  R  D   ++  M
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E  +  +   Y+ +I  L K  +  DA+  +K++  KG +PN V Y+AL++GLC  G+ 
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           ++A  +L +MI      N  TYS+L+  F ++GK  +A EI+++M + +   + V YS L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I+GLC   ++ EA  ++  M+S+GC PDVV+Y+++I+G C A  VE+ +KLF +M   + 
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKM--SQR 359

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
               +  TYN L+    +  ++  + +  + M   G  PD+ T NI L  L +       
Sbjct: 360 GLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCD------- 412

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + L E A+ +F            E M +  +     T+  V+Q +C+  +++ A
Sbjct: 413 --NGLLEKALVIF------------EDMQKSEMDLDIVTYTTVIQGMCKTGKVEDA 454



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 190/386 (49%), Gaps = 10/386 (2%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   + + + V +A+ L   MV E   +  + ++N++++ + +    + AL+F+  I   
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMV-EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEI--- 216

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               I PN +T+  ++  +C  G  ++A +L R+M  R   P++ TY  L+D   K  ++
Sbjct: 217 GRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKV 276

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  + +EM      P  VT++ LINGLC +  +  A ++ D M  KGC P+ V+YNTL
Sbjct: 277 LEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTL 336

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I+G C    ++  + L  +M     + N VTY T+I G  ++G           M+    
Sbjct: 337 INGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGV 396

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             + + Y+ L+ GL   G  E A+ +++ M +     + V Y+ +I G+C+ GK ++A  
Sbjct: 397 SPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWG 456

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +   +   G   +  TY+++M G    G  H+   ++  M +   + N+   S+L  G  
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND---SMLCLG-- 511

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVA 509
            DG +  +  +  +MLS G  P ++ 
Sbjct: 512 -DGDITISAELIKKMLSCGYAPSLLG 536


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 229/437 (52%), Gaps = 8/437 (1%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R   S+N+VL  + ++G    A  F   ++  +     P  +++  +++ +C       A
Sbjct: 76  RDAVSYNTVLAALCRQGGCLDAALFLLRVMAHE---TRPTAVSYTTLMRALCAERRTGQA 132

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           + L R+M      PD+ TY TL+ GLC    +D+AV LL EM   G  P  V ++ L+ G
Sbjct: 133 VGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQG 192

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            CK G     +K+ + M  +G  P+ V Y  LI  LC +G + KA  ++D+M+     PN
Sbjct: 193 YCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPN 252

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY  +IN + K G   +   +  +M E+   ++   Y+TLI+GL    + ++AM L +
Sbjct: 253 VVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLE 312

Query: 392 QMM--EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +M+  E   +PN V ++++I GLC+ G+  +A ++   M  NGCA N  T++ L+ G   
Sbjct: 313 EMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR 372

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
             K  KA+E+  +MA +    +   YS+LI+G C+  ++  A  + ++M   G +P++V 
Sbjct: 373 VHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVH 432

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y  ++  LC  G +E+A   F+EM       + DV  Y+ +++  C+  +   + + L  
Sbjct: 433 YIPLLAALCEQGMMEQARNFFDEM---HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKH 489

Query: 570 MMDRGCDPDLVTCNIFL 586
           M+D G  PD VT ++ +
Sbjct: 490 MLDEGLIPDSVTYSMLI 506



 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 136/448 (30%), Positives = 229/448 (51%), Gaps = 10/448 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++ A+ L   M  E   + T  S+ +++  +  E    R  +    + + +   + P+ +
Sbjct: 95  LDAALFLLRVMAHE--TRPTAVSYTTLMRALCAE---RRTGQAVGLLRDMQASGVRPDVV 149

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  +I+ +C    VD A++L REM     EP++  Y  L+ G CK  R +    + +EM
Sbjct: 150 TYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEM 209

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P  V +  LI+ LC+ G++ +A +++D M  +G  PN VTYN LI+ +C +G++
Sbjct: 210 SGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSV 269

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM--EERKFHVNEYIYS 371
            +A+SL + M+      + VTY T+I GL  +    +   +L  M   E     N   ++
Sbjct: 270 KEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFN 329

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           ++I GL K G+   A ++   M E GC  N V ++ LI GL RV K  +A E++ EM ++
Sbjct: 330 SVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASS 389

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   ++FTYS L+ GF +  +  +A  +   M ++      V Y  L+  LCE G + +A
Sbjct: 390 GLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQA 449

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
           R  + +M  + CK DVVAYS+MIHG C     + A +    ML  +    PD  TY++L+
Sbjct: 450 RNFFDEM-HKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHML--DEGLIPDSVTYSMLI 506

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDL 579
           N      ++  +  +L  M   G  PD+
Sbjct: 507 NMFANSGDLGAAERVLKQMTASGFVPDV 534



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/383 (33%), Positives = 203/383 (53%), Gaps = 5/383 (1%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D  +Y T++  LC++    +A L L  +      PT V++  L+  LC     G+A  L+
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
            +M   G  P+ VTY TLI GLC   ++DKAV LL  M  S   PN V Y  ++ G  K 
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKA 196

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           GR    ++V   M  R    +  +Y+ LI  L +EGK + A ++  +MME+G +PN V Y
Sbjct: 197 GRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTY 256

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           + LI+ +C+ G   EA  +   M+  G A +A TY++L+ G     +  +A+ + ++M  
Sbjct: 257 NVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316

Query: 466 NNCVY--NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
              +   N V ++ +IHGLC+ G++R+A  V   M   GC  ++V ++ +I GL     V
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           ++A++L +EM       +PD FTY+IL+N  CK   +  +  LL+ M   G +P+LV   
Sbjct: 377 KKAMELMDEM--ASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYI 434

Query: 584 IFLTALKEKLEAPQDGTDFLNEL 606
             L AL E+    Q   +F +E+
Sbjct: 435 PLLAALCEQGMMEQ-ARNFFDEM 456



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 212/451 (47%), Gaps = 42/451 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  + +A        +A+ L   M      +  V ++ +++  +       +A+E    
Sbjct: 115 SYTTLMRALCAERRTGQAVGLLRDM-QASGVRPDVVTYGTLIRGLCDAADVDKAVELLRE 173

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  +    I PN + ++ +++  C+ G  +   ++F EM  R  EPD+  Y  L+D LC+
Sbjct: 174 MCES---GIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCR 230

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E ++ +A  ++D+M   G  P  VT+NVLIN +CK G +  A  L +NM  KG   + VT
Sbjct: 231 EGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVT 290

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCM--PNEVTYGTIINGLVKLGRAVDGARVLMS 357
           YNTLI GL     +D+A+ LL+ M+  + M  PN VT+ ++I+GL K GR     +V   
Sbjct: 291 YNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDM 350

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M E     N   ++ LI GL +  K + AM+L  +M   G +P++  YS LI+G C++ +
Sbjct: 351 MAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQ 410

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            D AE +L +M  +G       Y  L+    E G   +A   + +M KN C  + V YS 
Sbjct: 411 VDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-CKLDVVAYST 469

Query: 478 LIHGLCE-----------------------------------DGKLREARMVWTQMLSRG 502
           +IHG C                                     G L  A  V  QM + G
Sbjct: 470 MIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASG 529

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             PDV  + S+I G    G  E+ L+L  EM
Sbjct: 530 FVPDVAVFDSLIKGYGAKGDTEKVLELIREM 560



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 172/332 (51%), Gaps = 6/332 (1%)

Query: 280 RAAKLVDNMFLKGCLP---NEVTYNTLIHGLCLKGN-LDKAVSLLDRMVASKCMPNEVTY 335
           R   L ++  L   LP   + V+YNT++  LC +G  LD A+ LL R++A +  P  V+Y
Sbjct: 58  RLVPLPESPALLSSLPSVRDAVSYNTVLAALCRQGGCLDAALFLL-RVMAHETRPTAVSY 116

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T++  L    R      +L  M+      +   Y TLI GL      + A++L ++M E
Sbjct: 117 TTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCE 176

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G +PN VVYS L+ G C+ G+ +   ++  EM   G   +   Y+ L+      GK  K
Sbjct: 177 SGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKK 236

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A ++   M +     N V Y+VLI+ +C++G ++EA  +   ML +G   D V Y+++I 
Sbjct: 237 ATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLIT 296

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GL     ++EA+ L  EM+  E   +P+V T+N +++ LCK   +  +  + + M + GC
Sbjct: 297 GLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGC 356

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
             +LVT N+ +  L  ++   +   + ++E+A
Sbjct: 357 ACNLVTFNLLIGGLL-RVHKVKKAMELMDEMA 387



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 196/440 (44%), Gaps = 47/440 (10%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           +  LI      G  K    V+ +M     E  VV   ++  +  +  K   V+EA+ L +
Sbjct: 221 YTGLIDSLCREGKVKKATQVMDKMMERGLEPNVV---TYNVLINSMCKEGSVKEAMSLRN 277

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+++      V ++N+++  +        A+     +++ + M + PN +TFN VI  +
Sbjct: 278 NMLEKGVALDAV-TYNTLITGLSGVLEMDEAMGLLEEMIHGETM-VEPNVVTFNSVIHGL 335

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ G +  A Q+   M    C  ++ T+  L+ GL + +++ +A+ L+DEM   G  P  
Sbjct: 336 CKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDS 395

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+++LING CK  ++ RA  L+  M   G  P  V Y  L+  LC +G +++A +  D 
Sbjct: 396 FTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDE 455

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C  + V Y T+I+G  +L              +RK                    
Sbjct: 456 M-HKNCKLDVVAYSTMIHGACRL-------------RDRK-------------------- 481

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A +  K M+++G  P++V YS LI+     G    AE +L +M  +G   +   + S
Sbjct: 482 --SAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDS 539

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC---EDGKLREARMVWTQML 499
           L+KG+   G   K +E+ ++M   +   +    S +   L    E   L ++   +   +
Sbjct: 540 LIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNEGKALLQSVPGFDTEV 599

Query: 500 SRGCKPDVVAYSSMIHGLCN 519
           S+G        ++M+H LCN
Sbjct: 600 SKGAVISSHELTNMLHKLCN 619



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/265 (24%), Positives = 110/265 (41%), Gaps = 17/265 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF S+I     +G  +    V   M          +F  +     + H V++A+ L   M
Sbjct: 327 TFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEM 386

Query: 145 V------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
                  D F     +  F  +  V   E L  +           +   I P  + +  +
Sbjct: 387 ASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKM----------RRDGIEPELVHYIPL 436

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           +  +C  G+++ A   F EM  +NC+ D+  Y T++ G C+      A   L  M  +G 
Sbjct: 437 LAALCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGL 495

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  VT+++LIN    +G+LG A +++  M   G +P+   +++LI G   KG+ +K + 
Sbjct: 496 IPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLE 555

Query: 319 LLDRMVASKCMPNEVTYGTIINGLV 343
           L+  M A     +     TI   LV
Sbjct: 556 LIREMTAKDIALDSKIISTIYTCLV 580



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 98/221 (44%), Gaps = 23/221 (10%)

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +A +Y++++      G    A      +  +      V Y+ L+  LC + +  +A  + 
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLL 136

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M + G +PDVV Y ++I GLC+A  V++A++L  EM   E   +P+V  Y+ LL   C
Sbjct: 137 RDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMC--ESGIEPNVVVYSCLLQGYC 194

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           K         +   M  RG +PD+V      T L + L                  +  +
Sbjct: 195 KAGRWECVSKVFEEMSGRGIEPDVV----MYTGLIDSL-----------------CREGK 233

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                ++++ M+++ L P   T+  ++  +C+   ++ A++
Sbjct: 234 VKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMS 274


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/505 (29%), Positives = 236/505 (46%), Gaps = 59/505 (11%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            + P+    N V++ +      D+   ++REM     EP I TY TL+D   KE R DEA
Sbjct: 203 GVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEA 262

Query: 247 VLLLDEM--QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL-------------- 290
            +LL EM  Q  GC    VT+NV+I+ L + G L  AAKLVD+M L              
Sbjct: 263 SMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYNPLIT 322

Query: 291 --------------------KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
                               +G +P  VTYN +IHGL     ++ A      M A   +P
Sbjct: 323 ALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLP 382

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + +TY +++NG  K G   +   +L  +           Y+TLI G  + G  E+A +L 
Sbjct: 383 DLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLK 442

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           ++M+E+GC P+   Y+ L++G  +V     A E   EM++ G   + F Y++ +      
Sbjct: 443 EEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELIL 502

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G  HKA ++ + M       + V Y+V+I GLC+ G L++A+ +  +M+S G +PD + Y
Sbjct: 503 GDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITY 562

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + +IH  C  G + EA KL N M  +    QP V TY IL++  C++ N+  +      M
Sbjct: 563 TCLIHAHCERGLLSEARKLLNGM--VSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKM 620

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
           +D G +P+ +T N+ + A                     L +  RT   +     ML++ 
Sbjct: 621 LDVGIEPNEITYNVLIHA---------------------LCRTGRTLLAYHHFHEMLERG 659

Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
           L+P   T+  ++   CR      AI
Sbjct: 660 LAPNKYTYTLLIDGNCREGNWADAI 684



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 213/428 (49%), Gaps = 6/428 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N V++ + +EG     LE    +V++  ++   ++ T+N +I  +   G V     L 
Sbjct: 282 TYNVVISFLAREG----HLENAAKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQ 337

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM      P + TY  ++ GL K  +++ A L   EM+  G  P  +T+N ++NG CK 
Sbjct: 338 MEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKA 397

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G L  A  L+ ++   G  P  +TYNTLI G C  G L++A  L + MV   C P+  TY
Sbjct: 398 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTY 457

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             ++NG  K+            M  +    + + Y+T I      G    A +L + MM 
Sbjct: 458 TILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMML 517

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KG  P+TV Y+ +IDGLC+ G   +A+++  +M+++G   +  TY+ L+    E G   +
Sbjct: 518 KGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSE 577

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A ++   M  +    + V Y++LIH  C  G L  A   + +ML  G +P+ + Y+ +IH
Sbjct: 578 ARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 637

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            LC  G    A   F+EML  E    P+ +TY +L++  C++ N + +I L   M   G 
Sbjct: 638 ALCRTGRTLLAYHHFHEML--ERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 695

Query: 576 DPDLVTCN 583
            PD  T N
Sbjct: 696 PPDYCTHN 703



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 233/489 (47%), Gaps = 10/489 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL--EKSFIFIFKAYGKAHLVEEAIRLFH 142
           T+ +L+  +   G      M+L  M  +    L  + ++  +     +   +E A +L  
Sbjct: 245 TYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVD 304

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +M      K +  ++N ++  +++ G   +       + N     I+P  +T+N +I  +
Sbjct: 305 SM--RLSKKASSFTYNPLITALLERGFVQKVEALQMEMENE---GIMPTLVTYNAIIHGL 359

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            +   V+ A   F EM      PD+ TY ++++G CK   L EA+ LL +++  G  PT 
Sbjct: 360 LKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTV 419

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +T+N LI+G C+ G L  A +L + M  +GC P+  TY  L++G     NL  A    D 
Sbjct: 420 LTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDE 479

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M++    P+   Y T I   + LG      ++   M  +  + +   Y+ +I GL K G 
Sbjct: 480 MLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 539

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +DA  L  +M+  G +P+ + Y+ LI   C  G   EA ++L  M+++G   +  TY+ 
Sbjct: 540 LKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTI 599

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+      G  + A   ++ M       NE+ Y+VLIH LC  G+   A   + +ML RG
Sbjct: 600 LIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERG 659

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P+   Y+ +I G C  G+  +A++L+ EM   +    PD  T+N L     K  ++ H
Sbjct: 660 LAPNKYTYTLLIDGNCREGNWADAIRLYFEM--HQNGIPPDYCTHNALFKGFDK-GHMYH 716

Query: 563 SIDLLNSMM 571
           +I+ L +++
Sbjct: 717 AIEYLENIV 725


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 142/562 (25%), Positives = 263/562 (46%), Gaps = 42/562 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F++   +L +++    +    SF  I    GK   V+EA+ LF  M
Sbjct: 324 AYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAM 383

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +   +    ++N +++++   G    A    + +   +H  + PN LT N+++  +C+
Sbjct: 384 KKD--AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEM---EHAGLFPNLLTVNIMVDRLCK 438

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               + A ++F     R C P+  TYC+L+DGL K+  +D+A  L + M   G    PV 
Sbjct: 439 AKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVV 498

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI     +G      K+   M  +GC P+    NT +  +   G+++K  ++ + + 
Sbjct: 499 YTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIK 558

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+  +Y  +I+GL K G+A + + +  +M+++ F ++   Y+ ++ G  K GK +
Sbjct: 559 GYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLD 618

Query: 385 DAMKLWKQM-----------------------------------MEKGCKPNTVVYSALI 409
            A ++ ++M                                     KG + N +VYS+LI
Sbjct: 619 KAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLI 678

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  IL EM+  G   N +T++SLM    ++ + ++A+  ++ M +  C 
Sbjct: 679 DGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCS 738

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N   YS+LI+GLC   K  +A + W +M  +G  P+VV Y++MI GL   G++ +A  L
Sbjct: 739 PNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSL 798

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F           PD  ++N L+  +   +    +  +      +GC  ++  C   L AL
Sbjct: 799 FERFKA--NGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDAL 856

Query: 590 KEKLEAPQDGTDFLNELAIRLF 611
            +     Q       E  +R F
Sbjct: 857 NKAECLEQAAVVGFGENTVRHF 878



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 158/611 (25%), Positives = 277/611 (45%), Gaps = 35/611 (5%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
            Y + +     L+     +      E V+  MRR K      ++  +  A  +A   E A
Sbjct: 142 GYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERA 201

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           + L   M  E   +  V  F +++  + +EG    AL   + +   K   + P+ + +N+
Sbjct: 202 LELLRQM-QEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV---KGSCLEPDIVLYNV 257

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
            I    + G VD A + F E+  +  +PD  +Y +++  LCK  RL EA  L  +M+ + 
Sbjct: 258 CIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETER 317

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P    +N +I G    G+   A KL+D +  +GC+P+ V++N+++  L  K  +D+A+
Sbjct: 318 AVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEAL 377

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           +L + M      PN  TY  II+ L   G+  +   +   ME      N    + ++  L
Sbjct: 378 TLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRL 436

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K  K E A ++++   ++GC PN+V Y +LIDGL + G  D+A  +   M++ G  AN 
Sbjct: 437 CKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANP 496

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             Y+SL++ FF  G+     +I+K+M +  C  +    +  +  + + G + + R ++  
Sbjct: 497 VVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFED 556

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP---DVFTYNILLNAL 554
           +   G  PDV +YS +IHGL  AG   E   +F+ M     K Q    D   YN +++  
Sbjct: 557 IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAM-----KQQGFALDARAYNAVVDGF 611

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK--EKL--------EAPQDGTDF-- 602
           CK   +  + ++L  M  +   P + T    +  L   ++L        EA   G +   
Sbjct: 612 CKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNV 671

Query: 603 --LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI----- 655
              + L     K  R    + I+E M++K L+P   TW  ++  L + + I  A+     
Sbjct: 672 IVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQS 731

Query: 656 ---NKCWSNLY 663
               KC  N Y
Sbjct: 732 MKEMKCSPNTY 742



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 199/428 (46%), Gaps = 17/428 (3%)

Query: 170 YHRALEFYNHIVNA-----KHMNIL----PNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           Y+  L F +H + A     + M++L    PN    +LV   + R   +D+A ++   M  
Sbjct: 117 YNAVLPFLSHDLAAMEKVLEEMSVLGYGVPNPACADLV-SALVRTRRLDDAERVIAAMRR 175

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
               P    Y  L+  + +  + + A+ LL +MQ  G       F  L+  L + G +  
Sbjct: 176 LKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEG 235

Query: 281 AAKLVDNMFLKG-CL-PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
           A  LVD   +KG CL P+ V YN  I      GN+D A      + +    P++V+Y ++
Sbjct: 236 ALALVDE--VKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSM 293

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I  L K GR  +   +   ME  +     Y Y+T+I G    G+ E+A KL  Q+ E+GC
Sbjct: 294 IWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGC 353

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ V +++++  L +  K DEA   LFE +      N+ TY+ ++     +GK  +A  
Sbjct: 354 IPSVVSFNSILTCLGKKRKVDEA-LTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYM 412

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           I  +M       N +  ++++  LC+  K   A  ++     RGC P+ V Y S+I GL 
Sbjct: 413 IRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLG 472

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G+V++A +LF  ML     + P V+T  I    +  +    H I     M  RGC PD
Sbjct: 473 KKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKI--FKEMNRRGCQPD 530

Query: 579 LVTCNIFL 586
           L   N ++
Sbjct: 531 LTLLNTYM 538



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/379 (23%), Positives = 172/379 (45%), Gaps = 26/379 (6%)

Query: 277 ELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           +L    K+++ M + G  +PN    + L+  L     LD A  ++  M   K  P    Y
Sbjct: 127 DLAAMEKVLEEMSVLGYGVPNPACAD-LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAY 185

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +I  + +  +      +L  M+E  + V   +++TL+  L +EG+ E A+ L  ++  
Sbjct: 186 TVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKG 245

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
              +P+ V+Y+  ID   + G  D A +   E+ + G   +  +Y+S++    ++G+  +
Sbjct: 246 SCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSE 305

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A E++  M     V     Y+ +I G    G+   A  +  Q+  RGC P VV+++S++ 
Sbjct: 306 AEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILT 365

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            L     V+EAL LF  M   +  ++P+  TYNI+++ LC    +  +  + + M   G 
Sbjct: 366 CLGKKRKVDEALTLFEAM---KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGL 422

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            P+L+T NI +                      RL K ++    +++ E   Q+  +P +
Sbjct: 423 FPNLLTVNIMVD---------------------RLCKAKKFEPAYEMFETASQRGCNPNS 461

Query: 636 STWERVVQELCRPKRIQAA 654
            T+  ++  L +   +  A
Sbjct: 462 VTYCSLIDGLGKKGNVDDA 480



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 168/346 (48%), Gaps = 7/346 (2%)

Query: 249 LLDEMQVDG-CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           +L+EM V G   P P   + L++ L +   L  A +++  M      P    Y  LI  +
Sbjct: 134 VLEEMSVLGYGVPNPACAD-LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAM 192

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVN 366
                 ++A+ LL +M           + T++  L + GR V+GA  L+  ++      +
Sbjct: 193 AEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGR-VEGALALVDEVKGSCLEPD 251

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             +Y+  I    K G  + A K + ++  +G KP+ V Y+++I  LC+ G+  EAEE+  
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFG 311

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +M        A+ Y++++ G+  +G+   A ++   + +  C+ + V ++ ++  L +  
Sbjct: 312 QMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKR 371

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ EA  ++  M  +  +P+   Y+ +I  LC AG VEEA  + +EM        P++ T
Sbjct: 372 KVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEME--HAGLFPNLLT 428

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            NI+++ LCK      + ++  +   RGC+P+ VT    +  L +K
Sbjct: 429 VNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKK 474



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 76/317 (23%), Positives = 132/317 (41%), Gaps = 36/317 (11%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
           +  IF++  + G + L    + +++  +  SG       VL  M+ ++      ++  I 
Sbjct: 585 TSSIFHAMKQQG-FALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSII 643

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH------RALEFYNH 179
               K   ++EA  LF             KS    LNVI+   L        R  E Y  
Sbjct: 644 DGLAKIDRLDEAYMLFEE----------AKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +       + PN  T+N ++  + +   ++ A+  F+ M    C P+ YTY  L++GLC+
Sbjct: 694 LEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCR 753

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             + ++A +   EMQ  G  P  VT+  +I GL K G +  A  L +     G  P+  +
Sbjct: 754 VQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAAS 813

Query: 300 YNTLIHGLC----------------LKG---NLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           +N LI G+                 LKG   N+   +SLLD +  ++C+      G   N
Sbjct: 814 FNALIEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQAAVVGFGEN 873

Query: 341 GLVKLGRAVDGARVLMS 357
            +    +  +G  +L+S
Sbjct: 874 TVRHFFQWTEGLDLLLS 890


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 135/417 (32%), Positives = 219/417 (52%), Gaps = 5/417 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL  +NH++   H + LP  + F+ ++  + R+      + L + + +   E D++ +  
Sbjct: 68  ALFSFNHMI---HKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++   +  R+D A  +L ++   G  P  VTF+ LINGLC   +  RA +  D M   G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN  TYNT+I G C  G    AV LL +M  +   P+ V Y TII+GL K     +  
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   ++ +    + + YS L+ GL    + E+A  L+ +MM     P+ V ++ L+D L
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G   EA+ I+  MI  G   N  TY+SLM G+    K  +A  ++  M    C+ N 
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNV 364

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y++LI+G C+  ++ EAR ++ +M  RG  P+   Y+++I GLC AG   EA +LF +
Sbjct: 365 VSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKD 424

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           M        PD+ T  ILL++LCK   + +++ L  +M D    P+LVT +I + A+
Sbjct: 425 MQ--AQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAM 479



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 220/429 (51%), Gaps = 10/429 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +E+A+  F+ M+ + H    +  F+ +L+ +++   Y   L     I   + + I  +  
Sbjct: 65  IEDALFSFNHMIHK-HPLPCIVEFDKLLSALVRIKHYGTVLSLSKRI---ELLRIERDVF 120

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            FN++I    RL  VD A  +  ++     EPD  T+ +L++GLC E++   A+   DEM
Sbjct: 121 HFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEM 180

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P   T+N +I G CK G+   A  L+  M   G  P+ V YNT+I GLC    +
Sbjct: 181 VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLV 240

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A+ +   +      P+  TY  +++GL    +  + + +   M       +   ++ L
Sbjct: 241 SEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNIL 300

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEG   +A  + K M+EKG +PN   Y++L++G C   K  EA  +   MI  GC
Sbjct: 301 VDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGC 360

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  +Y+ L+ G+ ++ +  +A E++ +M+    + N   Y+ LI GLC+ G+  EAR 
Sbjct: 361 MPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARE 420

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKSQPDVFTYNILL 551
           ++  M ++GC PD+V  + ++  LC  G ++ AL+LF  M   CL    +P++ TY+IL+
Sbjct: 421 LFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCL----KPNLVTYDILI 476

Query: 552 NALCKQSNI 560
            A+ K   I
Sbjct: 477 RAMYKSGKI 485



 Score =  198 bits (504), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 201/387 (51%), Gaps = 2/387 (0%)

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C L  +++A+  F  M  ++  P I  +  L+  L +       + L   +++       
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             FN+LIN   +   +  A  ++  +   G  P+ VT+++LI+GLC +    +A+   D 
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MVAS   PN  TY TII G  K+G+      +L  M++     +  IY+T+I GL K+  
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             +A+ ++ ++  KG +P+   YS L+ GLC   + +EA  +  EM++     +  T++ 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+    + G   +A  I K M +     N   Y+ L++G C   K+ EARMV+  M+++G
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKG 359

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C P+VV+Y+ +I+G C A  ++EA +LF+EM        P+ F YN L++ LC+      
Sbjct: 360 CMPNVVSYNILINGYCKAQRIDEARELFDEMSF--RGLIPNTFNYNTLISGLCQAGRHCE 417

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + +L   M  +GC PDLVTC I L +L
Sbjct: 418 ARELFKDMQAQGCSPDLVTCTILLDSL 444



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 200/398 (50%), Gaps = 10/398 (2%)

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           K YG    + + I L     D FH       FN ++N   +      A      I+    
Sbjct: 98  KHYGTVLSLSKRIELLRIERDVFH-------FNILINCFSRLQRVDFAFSVLGKIIK--- 147

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           +   P+ +TF+ +I  +C       A++ F EM     +P+++TY T++ G CK  +   
Sbjct: 148 LGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTV 207

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           AV LL +M   G  P  V +N +I+GLCK+  +  A  +   +  KG  P+  TY+ L+H
Sbjct: 208 AVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMH 267

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC     ++A +L + M++   MP+ VT+  +++ L K G   +   ++  M E+    
Sbjct: 268 GLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEP 327

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y++L++G   + K  +A  ++  M+ KGC PN V Y+ LI+G C+  + DEA E+ 
Sbjct: 328 NYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELF 387

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM   G   N F Y++L+ G  ++G+  +A E++KDM    C  + V  ++L+  LC+ 
Sbjct: 388 DEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKL 447

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
           G L  A  ++  M     KP++V Y  +I  +  +G +
Sbjct: 448 GYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 78/148 (52%), Gaps = 6/148 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA  +F  M+ +  C   V S+N ++N   +      A E ++ +       ++PNT 
Sbjct: 345 VFEARMVFDAMITK-GCMPNVVSYNILINGYCKAQRIDEARELFDEM---SFRGLIPNTF 400

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N +I  +C+ G    A +LF++M  + C PD+ T   L+D LCK   LD A+ L   M
Sbjct: 401 NYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460

Query: 254 QVDGCF-PTPVTFNVLINGLCKNGELGR 280
           Q D C  P  VT+++LI  + K+G++ R
Sbjct: 461 Q-DSCLKPNLVTYDILIRAMYKSGKIYR 487


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 143/494 (28%), Positives = 238/494 (48%), Gaps = 33/494 (6%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            N +TF  ++  +CR G V  A+ L   M     +PD  TY T+++G+CK      A+ +
Sbjct: 8   ANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNM 67

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +M         V ++ +++ LCK+G   +A  +   M  KG  PN +TYN +I G C 
Sbjct: 68  LRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCS 127

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G    A  LL  M+     P+ VT+  +IN  VK G+      +   M  R        
Sbjct: 128 YGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTIT 187

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR-----------VGKP 418
           YS++I G  K  + EDA  ++  M+ KGC P+ +  + LIDG CR           VG  
Sbjct: 188 YSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNV 247

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           + A+++  EMI+NG + +  T ++L+ G  E+GK  KA+E++K   K+    +    +++
Sbjct: 248 NVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNII 307

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I+G+C+  K+ EA  ++  +   G + DVV Y+ +I      G+   A  ++ EMLC   
Sbjct: 308 INGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLC--K 365

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ- 597
              P   TYN +++  CKQ+ +  +  +++SM+  GC PD+VT   F T +K   +A + 
Sbjct: 366 GIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVT---FSTLIKGYCKAGRV 422

Query: 598 -DGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
            DG +  +E+  R                 K    +G   I E M+   + P T T+  +
Sbjct: 423 DDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSM 482

Query: 642 VQELCRPKRIQAAI 655
           +  LC    +Q  +
Sbjct: 483 LAGLCTKAELQKGL 496



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 199/393 (50%), Gaps = 29/393 (7%)

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   GC  N VT+ TL++GLC +G + +A++L+DRMV     P+ VTYGTI+NG+ KLG 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
            V    +L  M+E +   N  IYS ++  L K+G    A  ++ +M EKG  PN + Y+ 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +IDG C  GK  +AE++L +MI      +  T+S+L+  F + GK   A E++++M + N
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS-----------MIHG 516
                + YS +I G C+  +L +A+ ++  M+S+GC PD++  ++           +IHG
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C  G+V  A  LF EM  +     PD+ T N LL  LC+   +  ++++         D
Sbjct: 241 FCQVGNVNVAQDLFQEM--ISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMD 298

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS-----------GGF----K 621
            D  TCNI +  +  K     +  D  N L +   +    +           G F     
Sbjct: 299 LDTATCNIIINGMC-KGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAED 357

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           I   ML K + P T T+  +V   C+  R++ A
Sbjct: 358 IYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEA 390



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 238/496 (47%), Gaps = 52/496 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +L+      G       ++ RM  E       ++  I     K      A+ +   M
Sbjct: 12  TFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKM 71

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            DE   K  V  ++++++ + ++G + +A   +  +       I PN LT+N +I   C 
Sbjct: 72  -DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEM---HEKGIFPNVLTYNCMIDGYCS 127

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G   +A QL R+M  RN +PD+ T+  L++   KE ++  A  L  EM     FPT +T
Sbjct: 128 YGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTIT 187

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL-----------IHGLCLKGNL 313
           ++ +I+G CK+  L  A  + D M  KGC P+ +T NTL           IHG C  GN+
Sbjct: 188 YSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNV 247

Query: 314 DKAVSLLDRMVASKCMPNEVTYGT-----------------------------------I 338
           + A  L   M+++   P+ VT  T                                   I
Sbjct: 248 NVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNII 307

Query: 339 INGLVKLGRAVDGARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           ING+ K G  VD A  L  S+       +   Y+ LI    KEG    A  ++ +M+ KG
Sbjct: 308 INGMCK-GNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKG 366

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P+TV Y++++DG C+  + +EA +++  M++ GC+ +  T+S+L+KG+ ++G+    +
Sbjct: 367 IIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGL 426

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E++ +M +   V + + Y+ LIHG C+ G L  A+ ++ +M+S G  PD + + SM+ GL
Sbjct: 427 ELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGL 486

Query: 518 CNAGSVEEALKLFNEM 533
           C    +++ L +  ++
Sbjct: 487 CTKAELQKGLTMLEDL 502



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 239/506 (47%), Gaps = 52/506 (10%)

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
           E  C   V +F +++N + +EG   +AL   + +V   H    P+ +T+  ++  +C+LG
Sbjct: 3   ETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQ---PDAVTYGTIVNGMCKLG 59

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
              +A+ + R+M     + ++  Y  ++D LCK+    +A  +  EM   G FP  +T+N
Sbjct: 60  DTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYN 119

Query: 267 VLINGLC-----------------------------------KNGELGRAAKLVDNMFLK 291
            +I+G C                                   K G++  A +L   M  +
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN----------- 340
              P  +TY+++I G C    L+ A  + D MV+  C P+ +T  T+I+           
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G  ++G       +   M       +    +TL++GL + GK E A++++K   +     
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL 299

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           +T   + +I+G+C+  K DEA ++   +  NG   +  TY+ L+  F + G   +A +I+
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIY 359

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
            +M     + + V Y+ ++ G C+  +L EAR +   M+S GC PDVV +S++I G C A
Sbjct: 360 LEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKA 419

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           G V++ L+LF+EM   +     D  TYN L++  CK  +++ + D+   M+  G  PD +
Sbjct: 420 GRVDDGLELFSEM--CQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTI 477

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNEL 606
           T    L  L  K E  Q G   L +L
Sbjct: 478 TFRSMLAGLCTKAEL-QKGLTMLEDL 502



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 210/424 (49%), Gaps = 27/424 (6%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           GC    VTF  L+NGLC+ G + +A  LVD M  +G  P+ VTY T+++G+C  G+   A
Sbjct: 5   GCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSA 64

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           +++L +M  S+   N V Y  I++ L K G  +    +   M E+    N   Y+ +I G
Sbjct: 65  LNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDG 124

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
               GK  DA +L + M+E+   P+ V +SALI+   + GK   AEE+  EM+       
Sbjct: 125 YCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPT 184

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV-----------LIHGLCED 485
             TYSS++ GF +  +   A  ++  M    C  + +  +            LIHG C+ 
Sbjct: 185 TITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQV 244

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G +  A+ ++ +M+S G  PD+V  ++++ GLC  G +E+AL++F   +  + K   D  
Sbjct: 245 GNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFK--VFQKSKMDLDTA 302

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI----------FLTALKEKLEA 595
           T NI++N +CK + +  + DL NS+   G + D+VT NI          FL A    LE 
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362

Query: 596 PQDG----TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
              G    T   N +     K+ R     ++V+ M+ +  SP   T+  +++  C+  R+
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422

Query: 652 QAAI 655
              +
Sbjct: 423 DDGL 426



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 35/403 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  +I  Y + G +   E +L  M     +  VV   + I  F   GK    EE   L+
Sbjct: 117 TYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEE---LY 173

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL-------PNTLT 194
             M+     +R +       + +I     H  LE      +AKHM  L       P+ +T
Sbjct: 174 REML-----RRNIFPTTITYSSMIDGFCKHSRLE------DAKHMFDLMVSKGCSPDIIT 222

Query: 195 FNLVIKTVCR-----------LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
            N +I   CR           +G V+ A  LF+EM      PDI T  TL+ GLC+  +L
Sbjct: 223 LNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKL 282

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           ++A+ +    Q         T N++ING+CK  ++  A  L +++ + G   + VTYN L
Sbjct: 283 EKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNIL 342

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I     +GN  +A  +   M+    +P+ VTY ++++G  K  R  +  +++ SM     
Sbjct: 343 IGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGC 402

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   +STLI G  K G+ +D ++L+ +M ++G   +T+ Y+ALI G C+VG  + A++
Sbjct: 403 SPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQD 462

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           I  EM+++G   +  T+ S++ G     +  K + + +D+ K+
Sbjct: 463 IFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKS 505



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 142/314 (45%), Gaps = 47/314 (14%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
            + L+     S D  +L  ++    R KR       I  F   G  ++ ++   LF  M+
Sbjct: 207 MFDLMVSKGCSPDIITLNTLIDGCCRAKR-----HLIHGFCQVGNVNVAQD---LFQEMI 258

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
                   + + N++L  + + G   +ALE +  +     M++  +T T N++I  +C+ 
Sbjct: 259 SN-GVSPDIVTCNTLLAGLCENGKLEKALEMF-KVFQKSKMDL--DTATCNIIINGMCKG 314

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTY------------------------C---------- 231
             VD A  LF  +PV   E D+ TY                        C          
Sbjct: 315 NKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTY 374

Query: 232 -TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +++DG CK+NRL+EA  ++D M  +GC P  VTF+ LI G CK G +    +L   M  
Sbjct: 375 NSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQ 434

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G + + +TYN LIHG C  G+L+ A  + + MV+S   P+ +T+ +++ GL        
Sbjct: 435 RGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQK 494

Query: 351 GARVLMSMEERKFH 364
           G  +L  +++   H
Sbjct: 495 GLTMLEDLQKSVDH 508


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 241/510 (47%), Gaps = 7/510 (1%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           Y    S    +I     S  F S  ++ Y    E      + +  +  AY ++  ++ +I
Sbjct: 55  YSHAQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSI 114

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
             F+ MVD+     +   FN++L  ++    +++   F+N       + +  +  +F +V
Sbjct: 115 SYFNEMVDKGFVPGS-NCFNNLLTFVVGSSSFNQWWRFFNE----SKIKVDLDVYSFGIV 169

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           IK  C  G ++ +  L  E+      P++  Y TL+DG CK   +++A  L  EM   G 
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGL 229

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
                T+ VLI+GL KNG   +  ++ + M   G  PN  TYN +++  C  G    A  
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFK 289

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           L D M       N VTY T+I GL +  +A +  +V+  M+    + N   Y+TLI G  
Sbjct: 290 LFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFC 349

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
             GK   A+ L + +  +G  P+ V Y+ L+ G C+ G    A +++ EM   G   +  
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKI 409

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TY+ L+  F       KA+++   M +     +   YSVLIHG C  G++ EA  ++  M
Sbjct: 410 TYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLM 469

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +++  +P+ V Y++M+ G C  GS   AL+LF EM   E +  P+V +Y  ++  LCK+ 
Sbjct: 470 VAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREM--EEKELPPNVASYRYMIEVLCKER 527

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
               +  L+  M+D G DP     N+   A
Sbjct: 528 KSKEAEGLVEKMIDTGIDPSDSILNLISRA 557



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 224/461 (48%), Gaps = 7/461 (1%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           L H + +    +   + +  ++N  +Q      ++ ++N +V+      +P +  FN ++
Sbjct: 80  LLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDK---GFVPGSNCFNNLL 136

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             V      +   + F E  ++  + D+Y++  ++ G C+   ++++  LL E++  G  
Sbjct: 137 TFVVGSSSFNQWWRFFNESKIK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFS 195

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  V +  LI+G CK GE+ +A  L   M   G + NE TY  LIHGL   G   +   +
Sbjct: 196 PNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEM 255

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            ++M      PN  TY  ++N   K GR  D  ++   M ER    N   Y+TLI GL +
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCR 315

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           E KA +A K+  QM   G  PN + Y+ LIDG C VGK  +A  +  ++ + G + +  T
Sbjct: 316 EMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ L+ GF + G    A ++ K+M +     +++ Y++LI        + +A  + + M 
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPME 435

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G  PDV  YS +IHG C  G + EA +LF  M+    K +P+   YN ++   CK+ +
Sbjct: 436 ELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVA--KKLEPNKVIYNTMVLGYCKEGS 493

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQDG 599
              ++ L   M ++   P++ +    +  L KE+     +G
Sbjct: 494 SYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEG 534



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 175/362 (48%), Gaps = 36/362 (9%)

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMV------ASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           Y  +I+      +LD ++S  + MV       S C  N +T+    +   +  R  + ++
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +       K  ++ Y +  +I G  + G+ E +  L  ++ E G  PN V+Y+ LIDG C
Sbjct: 157 I-------KVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           + G+ ++A+++ FEM   G  AN +TY+ L+ G F++G   +  E+++ M ++    N  
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y+ +++  C+DG+ ++A  ++ +M  RG   ++V Y+++I GLC      EA K+ ++M
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
                   P++ TYN L++  C    +  ++ L   +  RG  P LVT NI ++      
Sbjct: 330 K--SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG----- 382

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                             K+  TSG  K+V+ M ++ + P   T+  ++    R   ++ 
Sbjct: 383 ----------------FCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEK 426

Query: 654 AI 655
           AI
Sbjct: 427 AI 428


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/414 (30%), Positives = 212/414 (51%), Gaps = 5/414 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   + KA  +E+   ++  MV+  +  R    +  +++ + + G +  A +   H
Sbjct: 12  TFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRA-SGYGILISCLCKVGNFDEAYKLL-H 69

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
            +  K        + ++ +I  +C+L  V+ A +L  +M  R   PD  TY  +++ LCK
Sbjct: 70  TMRLKRFK--RKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCK 126

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R+D+A+  ++EM   G  P    +N +++GLC+  ++  A  L + M  +   PN VT
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTLI+GLC    ++ A  L   M     +P EV+Y T+I+G  K    V    V   M 
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 N   Y+TLI GL K GK + A ++   M++KG  PN   YS LIDG C+V + D
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA ++L +M+  G A    TY+ L+     + K   A ++++ MA+  C    V Y+ L+
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLL 366

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             LC   +L  A  ++ +M+++GC PD + Y ++  GL  AG V EA +L  +M
Sbjct: 367 RALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/418 (30%), Positives = 213/418 (50%), Gaps = 7/418 (1%)

Query: 82  GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           G +TF ++   +A +G  + ++ V   M      +    +  +     K    +EA +L 
Sbjct: 9   GAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLL 68

Query: 142 HTM-VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           HTM +  F  KR   ++++++N + +      A E    +         P+ LT+  +++
Sbjct: 69  HTMRLKRF--KRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP----PDALTYGPIVE 122

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+   +D+A+    EM  R  +PD + Y  ++ GLC+E +++EA LL ++M      P
Sbjct: 123 RLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINP 182

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             VT+N LINGLCK   +  A +L   M  KG +P EV+YNTLI G C K +L  A  + 
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D+MV S C+PN VTY T+I+GL K G+    A VL  M ++    N   YS LI G  K 
Sbjct: 243 DKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKV 302

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            + ++A KL +QM+ +G  P  V Y+ L++ LCR  K ++A ++   M    C     TY
Sbjct: 303 RRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTY 362

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           ++L++      +   A  ++ +M    C  + + Y  L  GL   GK+ EA+ +  +M
Sbjct: 363 NTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 213/437 (48%), Gaps = 24/437 (5%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M +R   P   T+ T+ DG  K  RL++   +   M   G       + +LI+ LCK G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
              A KL+  M LK      + Y+T+I+ LC    +++A  L+++M A    P+ +TYG 
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           I+  L K  R  D    +  M  R    + +IY+ ++SGL +E K E+A  L+++M+++ 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             PN V Y+ LI+GLC+  + + A E+  EM   G      +Y++L+ GF +      A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           +++  M ++NCV N V Y+ LI GL + GK++ A  V   M+ +G  P+V  YS +I G 
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C    V+EA KL  +M  +     P V TYNILLN+LC+   +  +  L   M  R C P
Sbjct: 300 CKVRRVDEAHKLLEQM--VTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHP 357

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
            +VT N  L A                     L   ++  G  ++   M+ K   P   T
Sbjct: 358 TVVTYNTLLRA---------------------LCHHKQLDGAHRLYAEMIAKGCPPDAIT 396

Query: 638 WERVVQELCRPKRIQAA 654
           ++ +   L R  ++  A
Sbjct: 397 YDTLAWGLTRAGKVHEA 413



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/426 (30%), Positives = 209/426 (49%), Gaps = 41/426 (9%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN+V +   + G   +  E Y  +V A +         + ++I  +C++G  D A +L 
Sbjct: 12  TFNTVADGFAKAGRLEQVKEVYQGMVEAGYT---LRASGYGILISCLCKVGNFDEAYKLL 68

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             M ++  +     Y T+++ LCK NR++EA  L+++M      P  +T+  ++  LCK 
Sbjct: 69  HTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGPIVERLCKT 127

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +  A   V+ M  +G  P+   YN ++ GLC +  +++A  L ++MV  +  PN VT 
Sbjct: 128 KRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT- 186

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
                                             Y+TLI+GL K  + E A +L+K+M  
Sbjct: 187 ----------------------------------YNTLINGLCKAWRIETAYELFKEMAG 212

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KG  P  V Y+ LIDG C+      A+++  +M+ + C  N  TY++L+ G  +SGK   
Sbjct: 213 KGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQA 272

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A E+   M K     N   YS LI G C+  ++ EA  +  QM+++G  P VV Y+ +++
Sbjct: 273 AAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLN 332

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            LC A  +E+A KLF  M   + +  P V TYN LL ALC    +  +  L   M+ +GC
Sbjct: 333 SLCRADKLEDAFKLFRGMA--QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGC 390

Query: 576 DPDLVT 581
            PD +T
Sbjct: 391 PPDAIT 396



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 4/230 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +E A  LF  M  + +    V S+N++++   ++     A + ++ +V +   N +
Sbjct: 196 KAWRIETAYELFKEMAGKGYVPTEV-SYNTLIDGFCKKKDLVAAKDVFDKMVRS---NCV 251

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T+  +I  + + G V  A ++   M  +   P++ TY  L+DG CK  R+DEA  L
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 311

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L++M   G  PT VT+N+L+N LC+  +L  A KL   M  + C P  VTYNTL+  LC 
Sbjct: 312 LEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCH 371

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
              LD A  L   M+A  C P+ +TY T+  GL + G+  +   ++  M+
Sbjct: 372 HKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 121/246 (49%), Gaps = 4/246 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI     +   ++   +   M  +  V  E S+  +   + K   +  A  +F  M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V   +C   V ++ ++++ + + G    A E  + +V      + PN  T++ +I   C+
Sbjct: 246 VRS-NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK---GVTPNVATYSCLIDGFCK 301

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +  VD A +L  +M  +   P + TY  L++ LC+ ++L++A  L   M    C PT VT
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 361

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L+  LC + +L  A +L   M  KGC P+ +TY+TL  GL   G + +A  L+++M 
Sbjct: 362 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421

Query: 325 ASKCMP 330
            +K  P
Sbjct: 422 LTKRNP 427



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 65/158 (41%), Gaps = 24/158 (15%)

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M  R   P    ++++  G   AG +E+  +++  M+  E         Y IL++ LCK 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMV--EAGYTLRASGYGILISCLCKV 58

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
            N   +  LL++M               L   K K  A     ++L +L        R  
Sbjct: 59  GNFDEAYKLLHTMR--------------LKRFKRKAIAYSTIINWLCKL-------NRVE 97

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              +++E M  ++  P   T+  +V+ LC+ KRI  A+
Sbjct: 98  EARELIEKM-ARYAPPDALTYGPIVERLCKTKRIDDAL 134


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 143/472 (30%), Positives = 235/472 (49%), Gaps = 34/472 (7%)

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGL------YHRALE---FYNHIVNAKHM----- 186
           F+T++D    +  +K+   VL V+++  +      Y+  ++   F N + NAK++     
Sbjct: 276 FNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMA 335

Query: 187 --NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              + PN  T+  +I  +C+  +VD A+ LF EM  +N  PDI TY +L+DGLCK + L+
Sbjct: 336 QSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLE 395

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            A+ L  +M+  G  P   ++ +L++ LCK G L  A +    + +KG   N  TYN +I
Sbjct: 396 RAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMI 455

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +GLC      +A+ L  +M    CMP+ +T+ TII  L +        ++L  M  R   
Sbjct: 456 NGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIAR--- 512

Query: 365 VNEYIYSTLISGLFKEGKAE-DAMKLWKQMMEKGC-KPNTVVYSALIDGLCRVGKPDEAE 422
                      GL +  K      K+   +M K C KP+ V Y  L+DG   V +   A+
Sbjct: 513 -----------GLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAK 561

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            + + M   G   N   Y+ ++ G  +     +A+ ++++M   N   N V Y+ LI  L
Sbjct: 562 YVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDAL 621

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C++  L  A  +  +M   G +PDV +Y+ ++ GLC +G +E A ++F  +L        
Sbjct: 622 CKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLV--KGYHL 679

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
           +V  Y  ++N LCK      ++DL   M D+GC PD VT +I + AL EK E
Sbjct: 680 NVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDE 731



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 233/485 (48%), Gaps = 9/485 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           FN +L+ ++    Y   +  +      +     P+  T N+++   C L  +  A  +  
Sbjct: 66  FNYILSSLVNNKHYPTVISLFKKF---ESNGATPDLCTLNILMNCFCHLTHITFAFSVLA 122

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            +  R   P+  T  TL+ GLC    + +A+   D++   G     V++  LINGLCK G
Sbjct: 123 NILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTG 182

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           E    A+L+  +      P+ V YNT+IH LC    L  A  L   M+     PN VTY 
Sbjct: 183 ETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYN 242

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++ G   +G   +   +L  M+ +  + +   ++TLI  L KEGK + A  +   MM+ 
Sbjct: 243 ALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKA 302

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
             KP+ V Y++LIDG   + K   A+ + + M  +G   N  TY++++ G  +     +A
Sbjct: 303 CIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEA 362

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + ++++M   N + + V Y+ LI GLC++  L  A  +  +M  +G +PDV +Y+ ++  
Sbjct: 363 MSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDA 422

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC  G +E A + F  +L        +V TYN+++N LCK      ++DL + M  +GC 
Sbjct: 423 LCKGGRLENAKEFFQRLLV--KGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCM 480

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF---KRQRTSGGFKIVEVMLQKFLSP 633
           PD +T    + AL EK E  +     L E+  R     ++ R      ++ VM +  + P
Sbjct: 481 PDAITFKTIICALFEKDENDK-AEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKP 539

Query: 634 QTSTW 638
              T+
Sbjct: 540 DVVTY 544



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 229/480 (47%), Gaps = 26/480 (5%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T N +IK +C  G +  A+    ++  +  + +  +Y TL++GLCK         L
Sbjct: 131 PNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARL 190

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +++     P  V +N +I+ LCKN  LG A  L   M +KG  PN VTYN L++G C+
Sbjct: 191 LRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCI 250

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+L +A SLL+ M      P+  T+ T+I+ L K G+      VL  M +     +   
Sbjct: 251 MGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVT 310

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++LI G F   K ++A  ++  M + G  PN   Y+ +IDGLC+    DEA  +  EM 
Sbjct: 311 YNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMK 370

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                 +  TY+SL+ G  ++    +A+ + K M +     +   Y++L+  LC+ G+L 
Sbjct: 371 YKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 430

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYN 548
            A+  + ++L +G   +V  Y+ MI+GLC A    EA+ L ++M   E K   PD  T+ 
Sbjct: 431 NAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM---EGKGCMPDAITFK 487

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPD----LVTCNIFLTALKEKLEAPQ------- 597
            ++ AL ++     +  +L  M+ RG        L    I L  + +    P        
Sbjct: 488 TIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTL 547

Query: 598 -DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            DG   +NEL    +          +   M Q  ++P    +  ++  LC+ K +  A++
Sbjct: 548 MDGYFLVNELKHAKY----------VFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMS 597



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 234/476 (49%), Gaps = 33/476 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF +LI      G  K+ ++VL  M +   +  VV   S I     Y   + V+ A  +F
Sbjct: 275 TFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLI---DGYFFLNKVKNAKYVF 331

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           ++M         V+++ ++++ + +E +   A+  +  +   K+ N++P+ +T+  +I  
Sbjct: 332 YSMAQS-GVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEM---KYKNMIPDIVTYTSLIDG 387

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+   ++ AI L ++M  +  +PD+Y+Y  L+D LCK  RL+ A      + V G    
Sbjct: 388 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLN 447

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             T+NV+INGLCK    G A  L   M  KGC+P+ +T+ T+I  L  K   DKA  +L 
Sbjct: 448 VQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILR 507

Query: 322 RMVA----------------------SKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            M+A                        C+ P+ VTYGT+++G   +        V  SM
Sbjct: 508 EMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSM 567

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +     N   Y+ +I GL K+   ++AM L+++M  K   PN V Y++LID LC+    
Sbjct: 568 AQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHL 627

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           + A  +L EM  +G   + ++Y+ L+ G  +SG+   A EI++ +       N   Y+ +
Sbjct: 628 ERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAM 687

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           I+ LC+ G   EA  +  +M  +GC PD V +  +I  L      ++A K+  EM+
Sbjct: 688 INELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMI 743



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 191/380 (50%), Gaps = 4/380 (1%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A+  F  M +    P  + +  ++  L         + L  + + +G  P   T N+L+N
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
             C    +  A  ++ N+  +G  PN +T NTLI GLC +G + KA+   D++VA     
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N+V+Y T+INGL K G     AR+L  +E      +  +Y+T+I  L K     DA  L+
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            +M+ KG  PN V Y+AL+ G C +G   EA  +L EM       +  T+++L+    + 
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           GK   A  +   M K     + V Y+ LI G     K++ A+ V+  M   G  P+V  Y
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNISHSIDLLNS 569
           ++MI GLC    V+EA+ LF EM   + K+  PD+ TY  L++ LCK  ++  +I L   
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEM---KYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKK 403

Query: 570 MMDRGCDPDLVTCNIFLTAL 589
           M ++G  PD+ +  I L AL
Sbjct: 404 MKEQGIQPDVYSYTILLDAL 423



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 159/337 (47%), Gaps = 29/337 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTM-VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           S+  +  A  K   +E A   F  + V  +H    V+++N ++N + +  L+  A++  +
Sbjct: 415 SYTILLDALCKGGRLENAKEFFQRLLVKGYHL--NVQTYNVMINGLCKADLFGEAMDLKS 472

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE-------------- 224
            +   +    +P+ +TF  +I  +      D A ++ REM  R  +              
Sbjct: 473 KM---EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVL 529

Query: 225 ---------PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                    PD+ TY TLMDG    N L  A  +   M   G  P    + ++I+GLCK 
Sbjct: 530 AVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKK 589

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +  A  L + M  K   PN VTY +LI  LC   +L++A++LL  M      P+  +Y
Sbjct: 590 KTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSY 649

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +++GL K GR      +   +  + +H+N  +Y+ +I+ L K G  ++A+ L  +M +
Sbjct: 650 TILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMED 709

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           KGC P+ V +  +I  L    + D+AE+IL EMI  G
Sbjct: 710 KGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARG 746



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 78/146 (53%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           KH N+ PN +T+  +I  +C+   ++ AI L +EM     +PD+Y+Y  L+DGLCK  RL
Sbjct: 603 KHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRL 662

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           + A  +   + V G       +  +IN LCK G    A  L   M  KGC+P+ VT++ +
Sbjct: 663 EGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDII 722

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCM 329
           I  L  K   DKA  +L  M+A   M
Sbjct: 723 IWALFEKDENDKAEKILXEMIARGLM 748


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 215/393 (54%), Gaps = 2/393 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP  + F+ +  ++ R+G  +  + L +E+     E DI++   L++  C  +R+D  + 
Sbjct: 59  LPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLS 118

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L ++   G  P+ VTF  L+NGLC  G++ +   L D+M ++G  PN  TYN +I+ L 
Sbjct: 119 VLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLS 178

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G  ++A+  L +M    C+PN V Y T+I+G    G+  +   V   M  +    N Y
Sbjct: 179 KSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVY 238

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y++L++G  K  + E+A++L  + + KG  P+ V ++ +I GLCR G+P  A+++   +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
             +G   N  TY  L+ G  + G   +A  ++++M ++    N V Y++LI  LC+ GK+
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
           ++ + ++++++  G KP+V  Y++++  LC  G + EA KLF +M   E    PD   YN
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM--EEDGCTPDKCAYN 416

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +++    +  + S +  L+  M++RG   D  T
Sbjct: 417 VIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 207/403 (51%), Gaps = 3/403 (0%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D+A+  FR M +R   P I  +  L   + +    +  V L  E++  G      + ++L
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           IN  C    +     ++  +   G  P+ VT+ TL++GLC++G +D+ + L D M+    
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            PN  TY  IIN L K G+A +    L  ME+     N   YSTLI G    G+ ++A  
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           ++  M+ KGC PN   Y++L++G C++ + +EA ++L E +  G   +  T+++++ G  
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
            +G+   A ++++ +  +    N + Y VL+ GLC+ G L EA  ++ +M     KP++V
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +I  LC  G +++  +LF+ +  ++   +P+V+TY  L+ ALCK+  I  +  L  
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRL--IDEGLKPNVYTYTALVGALCKEGLIIEAHKLFR 401

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
            M + GC PD    N+ +    +  + P      + E+  R F
Sbjct: 402 KMEEDGCTPDKCAYNVIIQGFLQH-KDPSMARQLVEEMVNRGF 443



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 158/290 (54%), Gaps = 3/290 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++N ++N + + G  + AL F   +   + +  +PN + ++ +I   C  G +D A  
Sbjct: 167 VYTYNVIINSLSKSGKANEALGFLKQM---EKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +F  M  + C P++YTY +LM+G CK  R++EAV LLDE    G  P  VTF  +I+GLC
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           + G    A +L   +   G  PN +TY  L+ GLC  GNL++A +L   M  S   PN V
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            Y  +I+ L K G+  DG  +   + +     N Y Y+ L+  L KEG   +A KL+++M
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            E GC P+   Y+ +I G  +   P  A +++ EM+N G +A+A T + L
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 150/573 (26%), Positives = 262/573 (45%), Gaps = 16/573 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I+      D  S    L  M R        +F  +   Y + + V+ A  LF  M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                 +  V S+ +++    + G    A+E +  +         P+   +  ++K +C+
Sbjct: 73  PLRGFAQDVV-SYAALIEGFCETGRIDEAVELFGEMDQ-------PDMHMYAALVKGLCK 124

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G  +  + + R M      P    Y  ++D  C E +  EA  +L EM   G  P  VT
Sbjct: 125 AGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVT 184

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
              +IN  CK G +  A ++++ M L+GC PN  TYN L+ G C +G + KA++LL++M 
Sbjct: 185 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMR 244

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ VTY  +I G    G      R+L  ME      ++Y Y+ LI+ L K+G+ +
Sbjct: 245 VCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 304

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A  L+  +  +G KPN V +++LI+GLC+ GK D A + L +M++ GC  + +TYSS +
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +   +     + +    +M + +   + V Y+++IH L ++         W +M+S GC 
Sbjct: 365 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 424

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PDVV Y++ +   C  G + EA  +  EM   +     D   YN L++         H++
Sbjct: 425 PDVVTYTTSMRAYCIEGRLNEAENVLMEM--SKNGVTVDTMAYNTLMDGHASIGQTDHAV 482

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
            +L  M      P+  T  I L  L + +L       D L      ++K    +  F + 
Sbjct: 483 SILKQMTSVASVPNQFTYFILLRHLVRMRLVE-----DVLPLTPAGVWKAIELTDVFGLF 537

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +VM +    P + T+  +++      R + A +
Sbjct: 538 DVMKKNEFLPNSGTYSSILEGFSEDGRTEEATS 570



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 204/410 (49%), Gaps = 7/410 (1%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +H    P   T+N VI+++CR   + +A++    M      PD YT+ +L+ G C+ N++
Sbjct: 3   RHAPPAPAAPTYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQV 62

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A  L D+M + G     V++  LI G C+ G +  A +L   M      P+   Y  L
Sbjct: 63  DVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAAL 118

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           + GLC  G  ++ + +L RM      P+   Y  +++      +A +   +L  M E+  
Sbjct: 119 VKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGL 178

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
                  + +I+   KEG+  DA+++ + M  +GCKPN   Y+AL+ G C  GK  +A  
Sbjct: 179 APCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMA 238

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L +M   G   +A TY+ L++G    G    A  + + M  +  + ++  Y+ LI+ LC
Sbjct: 239 LLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALC 298

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           +DG+  +A  ++  + +RG KP+ V ++S+I+GLC +G V+ A K   +M  +     PD
Sbjct: 299 KDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKM--VSAGCTPD 356

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL-TALKEK 592
            +TY+  +  LCK       +  +  M+ +   P  V   I +   LKE+
Sbjct: 357 TYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKER 406



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 257/563 (45%), Gaps = 73/563 (12%)

Query: 93  YANSGDFKSLEMVLYRMRREKRVVLEKSF-----------IFIFKAYGKAHLVEEAIRLF 141
           YA   DF+  E    R  +E   +L++ F             +  AY K   + +A+R+ 
Sbjct: 150 YAAVVDFRCWE----RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVL 205

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M     CK  V ++N+++     EG  H+A+   N +   +   + P+ +T+NL+I+ 
Sbjct: 206 ELMKLR-GCKPNVWTYNALVQGFCNEGKVHKAMALLNKM---RVCGVNPDAVTYNLLIRG 261

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C  G +++A +L R M       D YTY  L++ LCK+ R D+A  L D ++  G  P 
Sbjct: 262 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 321

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC-LKGN-------- 312
            VTFN LINGLCK+G++  A K ++ M   GC P+  TY++ I  LC +KG+        
Sbjct: 322 AVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIG 381

Query: 313 --LDKAV--------------------SLLDR----MVASKCMPNEVTYGTIINGLVKLG 346
             L K V                     L+ R    MV+S C P+ VTY T +      G
Sbjct: 382 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEG 441

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           R  +   VLM M +    V+   Y+TL+ G    G+ + A+ + KQM      PN   Y 
Sbjct: 442 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF 501

Query: 407 ALIDGLCR--------------VGKPDEAEEI--LFE-MINNGCAANAFTYSSLMKGFFE 449
            L+  L R              V K  E  ++  LF+ M  N    N+ TYSS+++GF E
Sbjct: 502 ILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 561

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G+  +A  +   M +++   NE  Y+ L+   C+  +  +A ++   M+  G  P +++
Sbjct: 562 DGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMS 621

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y  ++ GL   G  ++A ++F  M        PD   + ++++ L K+ +   S +++  
Sbjct: 622 YQHLLSGLICEGQTDKAKEIF--MNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIM 679

Query: 570 MMDRGCDPDLVTCNIFLTALKEK 592
           +    C P   T  +    L ++
Sbjct: 680 LERMNCRPSHQTYAMLTEELPDR 702



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 119/497 (23%), Positives = 211/497 (42%), Gaps = 80/497 (16%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+Q + N G       +L +MR         ++  + +       +E A RL   M
Sbjct: 219 TYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 278

Query: 145 ------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
                  D++       ++N+++N + ++G   +A   ++ +   +   I PN +TFN +
Sbjct: 279 EGDGLIADQY-------TYNALINALCKDGRTDQACSLFDSL---ETRGIKPNAVTFNSL 328

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           I  +C+ G VD A +   +M    C PD YTY + ++ LCK     E +  + EM     
Sbjct: 329 INGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 388

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL----- 313
            P+ V + ++I+ L K    G  A+    M   GC P+ VTY T +   C++G L     
Sbjct: 389 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 448

Query: 314 ------------------------------DKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
                                         D AVS+L +M +   +PN+ TY  ++  LV
Sbjct: 449 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 508

Query: 344 KLGRAVDGARVLMS------------------MEERKFHVNEYIYSTLISGLFKEGKAED 385
           ++ R V+    L                    M++ +F  N   YS+++ G  ++G+ E+
Sbjct: 509 RM-RLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEE 567

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A  L   M E     N  +Y+AL+   C+  +  +A  ++  MI +G   +  +Y  L+ 
Sbjct: 568 ATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLS 627

Query: 446 GFFESGKGHKAVEI-----WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           G    G+  KA EI     WKD +      +E+ + V+I GL + G    +R +   +  
Sbjct: 628 GLICEGQTDKAKEIFMNSRWKDYSP-----DEIVWKVIIDGLIKKGHSDISREMIIMLER 682

Query: 501 RGCKPDVVAYSSMIHGL 517
             C+P    Y+ +   L
Sbjct: 683 MNCRPSHQTYAMLTEEL 699


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 227/432 (52%), Gaps = 5/432 (1%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C      ++ ++ V ++EG+   +LE +  ++     N  P+  T N ++ +V + G   
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFN--PSVYTCNAILGSVVKSGEDV 215

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +     +EM  R   PD+ T+  L++ LC E   +++  L+ +M+  G  PT VT+N ++
Sbjct: 216 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           +  CK G    A +L+D+M  KG   +  TYN LIH LC    + K   LL  M      
Sbjct: 276 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 335

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PNEVTY T+ING    G+ +  +++L  M       N   ++ LI G   EG  ++A+K+
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +  M  KG  P+ V Y  L+DGLC+  + D A      M  NG      TY+ ++ G  +
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           +G   +AV +  +M+K+    + V YS LI+G C+ G+ + A+ +  ++   G  P+ + 
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           YS++I+  C  G ++EA++++  M+ LE  ++ D FT+N+L+ +LCK   ++ + + +  
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMI-LEGHTR-DHFTFNVLVTSLCKAGKVAEAEEFMRC 573

Query: 570 MMDRGCDPDLVT 581
           M   G  P+ V+
Sbjct: 574 MTSDGILPNTVS 585



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 213/440 (48%), Gaps = 5/440 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T+ ++N+VL+   ++G +  A+E  +H+   K   +  +  T+N++I  +CR   +    
Sbjct: 267 TIVTYNTVLHWYCKKGRFKAAIELLDHM---KSKGVDADVCTYNMLIHDLCRSNRIAKGY 323

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L R+M  R   P+  TY TL++G   E ++  A  LL+EM   G  P  VTFN LI+G 
Sbjct: 324 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 383

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
              G    A K+   M  KG  P+EV+Y  L+ GLC     D A     RM  +      
Sbjct: 384 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 443

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           +TY  +I+GL K G   +   +L  M +     +   YS LI+G  K G+ + A ++  +
Sbjct: 444 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 503

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           +   G  PN ++YS LI   CR+G   EA  I   MI  G   + FT++ L+    ++GK
Sbjct: 504 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 563

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A E  + M  +  + N V +  LI+G    G+  +A  V+ +M   G  P    Y S
Sbjct: 564 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 623

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           ++ GLC  G + EA K    +  +   +  D   YN LL A+CK  N++ ++ L   M+ 
Sbjct: 624 LLKGLCKGGHLREAEKFLKSLHAVP--AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 681

Query: 573 RGCDPDLVTCNIFLTALKEK 592
           R   PD  T    ++ L  K
Sbjct: 682 RSILPDSYTYTSLISGLCRK 701



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 228/514 (44%), Gaps = 18/514 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++N    EG    A +  N +++     + PN +TFN +I      G    A+++F
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLS---FGLSPNHVTFNALIDGHISEGNFKEALKMF 396

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             M  +   P   +Y  L+DGLCK    D A      M+ +G     +T+  +I+GLCKN
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G L  A  L++ M   G  P+ VTY+ LI+G C  G    A  ++ R+      PN + Y
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+I    ++G   +  R+  +M       + + ++ L++ L K GK  +A +  + M  
Sbjct: 517 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 576

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G  PNTV +  LI+G    G+  +A  +  EM   G     FTY SL+KG  + G   +
Sbjct: 577 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 636

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A +  K +       + V Y+ L+  +C+ G L +A  ++ +M+ R   PD   Y+S+I 
Sbjct: 637 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 696

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  G    A+ LF +         P+   Y   ++ + K       I     M + G 
Sbjct: 697 GLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 755

Query: 576 DPDLVTCNIFLTALKE--KLE---------APQDGTDFLNELAIRLF---KRQRTSGGFK 621
            PD+VT N  +       K+E           Q+G   L    I L    KR+  S  F 
Sbjct: 756 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 815

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +   ++   + P   T   +V  +C    ++  +
Sbjct: 816 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 849



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 131/566 (23%), Positives = 242/566 (42%), Gaps = 48/566 (8%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            TF  L+     +G     E  +  M  +  +    SF  +   YG +    +A  +F  M
Sbjct: 550  TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 609

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP---NTLTFNLVIKT 201
                H   T  ++ S+L  + + G    A +F       K ++ +P   +T+ +N ++  
Sbjct: 610  TKVGH-HPTFFTYGSLLKGLCKGGHLREAEKFL------KSLHAVPAAVDTVMYNTLLTA 662

Query: 202  VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ------- 254
            +C+ G +  A+ LF EM  R+  PD YTY +L+ GLC++ +   A+L   E +       
Sbjct: 663  MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 722

Query: 255  --------VDGCF---------------------PTPVTFNVLINGLCKNGELGRAAKLV 285
                    VDG F                     P  VT N +I+G  + G++ +   L+
Sbjct: 723  NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 782

Query: 286  DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
              M  +   PN  TYN L+HG   + ++  +  L   ++ +  +P+++T  +++ G+ + 
Sbjct: 783  PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 842

Query: 346  GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
                 G ++L +   R   V+ Y ++ LIS     G+   A  L K M   G   +    
Sbjct: 843  NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTC 902

Query: 406  SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
             A++  L R  +  E+  +L EM   G +  +  Y  L+ G    G    A  + ++M  
Sbjct: 903  DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 962

Query: 466  NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
            +      V  S ++  L + GK  EA ++   ML     P + ++++++H  C  G+V E
Sbjct: 963  HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 1022

Query: 526  ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            AL+L   ++      + D+ +YN+L+  LC + +++ + +L   M   G   +  T    
Sbjct: 1023 ALEL--RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1080

Query: 586  LTALKEKLEAPQDGTDFLNELAIRLF 611
            +  L  +  A       L +L  R F
Sbjct: 1081 IRGLLARETAFSGADIILKDLLARGF 1106



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 23/184 (12%)

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  N   Y +LI     +G ++++  ++  M   G  P V   ++++  +  +G      
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
               EML  + K  PDV T+NIL+N LC + +   S  L+  M   G  P +VT N  L 
Sbjct: 219 SFLKEML--KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                                   K+ R     ++++ M  K +     T+  ++ +LCR
Sbjct: 277 W---------------------YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 315

Query: 648 PKRI 651
             RI
Sbjct: 316 SNRI 319


>gi|297811615|ref|XP_002873691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319528|gb|EFH49950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 938

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 245/494 (49%), Gaps = 69/494 (13%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG-------LV 208
           ++N+V++ + + GL   A +F + +V    + ILP+T++FN +I   C++G       LV
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVK---IGILPDTVSFNTLIDGFCKVGNFARAKALV 219

Query: 209 DNAIQL---------------------FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           D   +L                     +R+M +   +PD+ T+ ++++ LCK+ ++ E  
Sbjct: 220 DEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGG 279

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-------------- 293
           LLL EM+  G +P  VT+  L++ L K  +   A  L   M ++G               
Sbjct: 280 LLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGL 339

Query: 294 ---------------------LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
                                +PN VTY  L+ GLC  G+L  A  ++ +M+     PN 
Sbjct: 340 FKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNV 399

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY ++ING VK G   +   ++  ME++    N + Y T+I GLFK GK E A ++ K+
Sbjct: 400 VTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEMSKE 459

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M   G + N  +  AL++ L R+G+  E + ++ +M++ G   +   Y+SL+  FF+ G 
Sbjct: 460 MRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGD 519

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A+   ++M +    ++ V Y+VLI GL + GK+  A   +  M  +G +PD+  ++ 
Sbjct: 520 EEAALSWAEEMQEKEMPWDVVSYNVLISGLLKFGKV-GADWAYKGMREKGIEPDIATFNI 578

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           M++     G  E  LKL+++M     K  P +   NI++  LC++  +  +ID+L+ MM 
Sbjct: 579 MMNSQRKQGDFEGILKLWDKMKSCGIK--PSLMICNIVVGMLCEKGKMKEAIDILDQMMF 636

Query: 573 RGCDPDLVTCNIFL 586
               P+L T  IFL
Sbjct: 637 MEIHPNLTTYRIFL 650



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 155/565 (27%), Positives = 250/565 (44%), Gaps = 96/565 (16%)

Query: 157 FNSVLNVIIQEGLYHRALEF-YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +NS+++     GL H  +   Y+ ++      + P+    N++I ++C++G +  AI L 
Sbjct: 96  WNSLIHQFNVNGLVHDQVSLVYSKMIAC---GVSPDVFALNVLIHSLCKVGQLSFAISLL 152

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R    R    D  TY T++ GLC+    DEA   L EM   G  P  V+FN LI+G CK 
Sbjct: 153 RN---RVISVDTVTYNTVISGLCEHGLADEAYQFLSEMVKIGILPDTVSFNTLIDGFCKV 209

Query: 276 GELGRAAKLVD----------------------------NMFLKGCLPNEVTYNTLIHGL 307
           G   RA  LVD                            +M + G  P+ VT++++I+ L
Sbjct: 210 GNFARAKALVDEISELNLITHTILISSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRL 269

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G + +   LL  M      PN VTY T+++ L K         +   M  R   V+ 
Sbjct: 270 CKDGKVMEGGLLLREMEEMGVYPNHVTYTTLVDSLFKAKDYRHALALYSQMVVRGIPVDL 329

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
            +Y+ L++GLFK G   +A K +K ++E    PN V Y+AL+DGLC+ G    AE I+ +
Sbjct: 330 VVYTVLMAGLFKAGDLREAEKTFKMLLEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQ 389

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M+      N  TYSS++ G+ + G   +AV + + M   N V N   Y  +I GL + GK
Sbjct: 390 MLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGK 449

Query: 488 -----------------------------------LREARMVWTQMLSRGCKPDVVAYSS 512
                                              ++E + +   M+S+G   D + Y+S
Sbjct: 450 QEVASEMSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTS 509

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQP-DVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +I      G  E AL    EM   + K  P DV +YN+L++ L K   +         M 
Sbjct: 510 LIDVFFKGGDEEAALSWAEEM---QEKEMPWDVVSYNVLISGLLKFGKVGADW-AYKGMR 565

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
           ++G +PD+ T NI + + +++        DF  E  ++L+ + ++ G            +
Sbjct: 566 EKGIEPDIATFNIMMNSQRKQ-------GDF--EGILKLWDKMKSCG------------I 604

Query: 632 SPQTSTWERVVQELCRPKRIQAAIN 656
            P       VV  LC   +++ AI+
Sbjct: 605 KPSLMICNIVVGMLCEKGKMKEAID 629



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 254/536 (47%), Gaps = 29/536 (5%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  + EA + F  ++++      V ++ ++++ + + G    A EF   I      ++ 
Sbjct: 341 KAGDLREAEKTFKMLLEDNEVPNVV-TYTALVDGLCKAGDLSSA-EFI--ITQMLEKSVF 396

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T++ +I    + G+++ A+ L R+M  +N  P+ +TY T++DGL K  + + A  +
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLMRKMEDQNVVPNGFTYGTVIDGLFKAGKQEVASEM 456

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM++ G        + L+N L + G +     LV +M  KG   + + Y +LI     
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFK 516

Query: 310 KGNLDKAVSLLDRMVASKCMP-NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            G+ + A+S  + M   K MP + V+Y  +I+GL+K G+ V        M E+    +  
Sbjct: 517 GGDEEAALSWAEEM-QEKEMPWDVVSYNVLISGLLKFGK-VGADWAYKGMREKGIEPDIA 574

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ +++   K+G  E  +KLW +M   G KP+ ++ + ++  LC  GK  EA +IL +M
Sbjct: 575 TFNIMMNSQRKQGDFEGILKLWDKMKSCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQM 634

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD---MAKNNCVYNEVCYSVLIHGLCED 485
           +      N  TY   +     S K  +A  I+K    +       +   Y+ LI  LC+ 
Sbjct: 635 MFMEIHPNLTTYRIFLD---MSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKL 691

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G  R+A MV   M +RG  PD V +++++HG      V +AL  ++ M+  E    P+V 
Sbjct: 692 GMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMM--EAGISPNVA 749

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL------KEKL----EA 595
           TYN ++  L     I      L+ M  RG  PD  T N  ++        KE +    E 
Sbjct: 750 TYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEM 809

Query: 596 PQDG----TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
             DG    T   N L     K  +     ++++ M ++ +SP TST+  ++  LC+
Sbjct: 810 IADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCK 865



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 119/507 (23%), Positives = 235/507 (46%), Gaps = 11/507 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+     +GD  S E ++ +M  +       ++  +   Y K  ++EEA+ L   M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVTYSSMINGYVKKGMLEEAVSLMRKM 425

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D+        ++ +V++ + + G    A E    +   + + +  N    + ++  + R
Sbjct: 426 EDQNVVPNGF-TYGTVIDGLFKAGKQEVASEMSKEM---RLIGVEENNYILDALVNHLKR 481

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G +     L ++M  +    D   Y +L+D   K    + A+   +EMQ        V+
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDHINYTSLIDVFFKGGDEEAALSWAEEMQEKEMPWDVVS 541

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NVLI+GL K G++G A      M  KG  P+  T+N +++    +G+ +  + L D+M 
Sbjct: 542 YNVLISGLLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDFEGILKLWDKMK 600

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    P+ +    ++  L + G+  +   +L  M   + H N   Y   +    K  +A+
Sbjct: 601 SCGIKPSLMICNIVVGMLCEKGKMKEAIDILDQMMFMEIHPNLTTYRIFLDMSSKHKRAD 660

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
              K  + ++  G K +  VY+ LI  LC++G   +A  ++ +M   G   +  T+++LM
Sbjct: 661 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTRKAAMVMEDMEARGFVPDTVTFNALM 720

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+F      KA+  +  M +     N   Y+ +I GL + G ++E     ++M SRG +
Sbjct: 721 HGYFVGSHVGKALSTYSMMMEAGISPNVATYNTIIRGLSDAGLIKEVEKWLSEMKSRGMR 780

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKSQPDVFTYNILLNALCKQSNISH 562
           PD   Y+++I G    G+ +E++ ++ EM+   L PK+     TYN+L++   K   +  
Sbjct: 781 PDDFTYNALISGQAKIGNKKESMTIYCEMIADGLVPKTS----TYNVLISEFAKVGKMLQ 836

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + +L+  M  R   P+  T    ++ L
Sbjct: 837 ATELMKEMGKRRVSPNTSTYCTMISGL 863



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 167/346 (48%), Gaps = 34/346 (9%)

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL-DRM 323
           F+ L       G L  AA+ +  M   G +P+   +N+LIH   + G +   VSL+  +M
Sbjct: 61  FHTLFRLYLSCGRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKM 120

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +A    P+      +I+ L K+G+      +L     R   V+   Y+T+ISGL + G A
Sbjct: 121 IACGVSPDVFALNVLIHSLCKVGQLSFAISLL---RNRVISVDTVTYNTVISGLCEHGLA 177

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA---------------------- 421
           ++A +   +M++ G  P+TV ++ LIDG C+VG    A                      
Sbjct: 178 DEAYQFLSEMVKIGILPDTVSFNTLIDGFCKVGNFARAKALVDEISELNLITHTILISSY 237

Query: 422 ------EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
                 EE   +M+ +G   +  T+SS++    + GK  +   + ++M +     N V Y
Sbjct: 238 YNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKDGKVMEGGLLLREMEEMGVYPNHVTY 297

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + L+  L +    R A  +++QM+ RG   D+V Y+ ++ GL  AG + EA K F   + 
Sbjct: 298 TTLVDSLFKAKDYRHALALYSQMVVRGIPVDLVVYTVLMAGLFKAGDLREAEKTFK--ML 355

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           LE    P+V TY  L++ LCK  ++S +  ++  M+++   P++VT
Sbjct: 356 LEDNEVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVFPNVVT 401



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 138/304 (45%), Gaps = 38/304 (12%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + +FN ++N   ++G +   L+ ++ +   K   I P+ +  N+V+  +C  G +  AI 
Sbjct: 573 IATFNIMMNSQRKQGDFEGILKLWDKM---KSCGIKPSLMICNIVVGMLCEKGKMKEAID 629

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  +M      P++ TY   +D   K  R D      + +   G   +   +N LI  LC
Sbjct: 630 ILDQMMFMEIHPNLTTYRIFLDMSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G   +AA ++++M  +G +P+ VT+N L+HG  +  ++ KA+S    M+ +   PN  
Sbjct: 690 KLGMTRKAAMVMEDMEARGFVPDTVTFNALMHGYFVGSHVGKALSTYSMMMEAGISPNVA 749

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW--- 390
           TY TII GL   G   +  + L  M+ R    +++ Y+ LISG  K G  +++M ++   
Sbjct: 750 TYNTIIRGLSDAGLIKEVEKWLSEMKSRGMRPDDFTYNALISGQAKIGNKKESMTIYCEM 809

Query: 391 --------------------------------KQMMEKGCKPNTVVYSALIDGLCRVGKP 418
                                           K+M ++   PNT  Y  +I GLC++   
Sbjct: 810 IADGLVPKTSTYNVLISEFAKVGKMLQATELMKEMGKRRVSPNTSTYCTMISGLCKLCTH 869

Query: 419 DEAE 422
            E E
Sbjct: 870 PEVE 873



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 63/122 (51%), Gaps = 7/122 (5%)

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL-FNEMLCLEPKSQPDV 544
           G+L  A    + M + G  PD+  ++S+IH     G V + + L +++M+       PDV
Sbjct: 72  GRLYGAARTLSAMCTFGVVPDLCLWNSLIHQFNVNGLVHDQVSLVYSKMIAC--GVSPDV 129

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
           F  N+L+++LCK   +S +I LL    +R    D VT N  ++ L E   A  +   FL+
Sbjct: 130 FALNVLIHSLCKVGQLSFAISLLR---NRVISVDTVTYNTVISGLCEHGLA-DEAYQFLS 185

Query: 605 EL 606
           E+
Sbjct: 186 EM 187


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 216/404 (53%), Gaps = 2/404 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P+ + F  V+  + ++   D  I L+ +M       D+Y++  L+   C+ +RL  A+ 
Sbjct: 76  IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LL +M   G  P+ VT   L+NG C+      A  LVD+M   G +PN V YNT+I+GLC
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
              +L+ A+ +   M       + VTY T+I+GL   GR  D AR+L  M +RK   N  
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ LI    KEG   +A  L+K+M+ +   PN   Y++LI+G C  G   +A+ +   M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ GC  +  TY++L+ GF +S +    ++++ +M     V +   Y+ LIHG C+ GKL
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A+ V+ +M+  G  PD+V Y+ ++  LCN G +E+AL +  ++   + +   D+ TYN
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL--QKSEMDVDIITYN 433

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           I++  LC+   +  +  L  S+  +G  PD +     ++ L  K
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 212/425 (49%), Gaps = 5/425 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++  F  VL VI +   +   +  Y+ + N   + I  +  +F ++I   CR   +  A+
Sbjct: 78  SIVDFTRVLTVIAKMNKFDIVIYLYHKMEN---LGISHDLYSFTILIHCFCRCSRLSLAL 134

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L  +M      P I T  +L++G C+ NR  EAV L+D M   G  P  V +N +INGL
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CKN +L  A ++   M  KG   + VTYNTLI GL   G    A  LL  MV  K  PN 
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           + +  +I+  VK G  ++   +   M  R    N + Y++LI+G    G   DA  ++  
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ KGC P+ V Y+ LI G C+  + ++  ++  EM   G   +AFTY++L+ G+ ++GK
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
            + A +++  M       + V Y++L+  LC +GK+ +A ++   +       D++ Y+ 
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I GLC    ++EA  LF  +       +PD   Y  +++ LC++     +  L   M +
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSL--TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492

Query: 573 RGCDP 577
            G  P
Sbjct: 493 DGFMP 497



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/381 (32%), Positives = 191/381 (50%), Gaps = 2/381 (0%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D+A  LF EM      P I  +  ++  + K N+ D  + L  +M+  G      +F +L
Sbjct: 61  DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+  C+   L  A  L+  M   G  P+ VT  +L++G C      +AVSL+D M     
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
           +PN V Y T+INGL K     +   V   ME++    +   Y+TLISGL   G+  DA +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L + M+++   PN + ++ALID   + G   EA  +  EMI      N FTY+SL+ GF 
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             G    A  ++  M    C  + V Y+ LI G C+  ++ +   ++ +M  +G   D  
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+++IHG C AG +  A K+FN M  ++    PD+ TYNILL+ LC    I  ++ ++ 
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRM--VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418

Query: 569 SMMDRGCDPDLVTCNIFLTAL 589
            +     D D++T NI +  L
Sbjct: 419 DLQKSEMDVDIITYNIIIQGL 439



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 201/413 (48%), Gaps = 23/413 (5%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           + D+A  L  EM      P+ V F  ++  + K  +      L   M   G   +  ++ 
Sbjct: 59  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            LIH  C    L  A++LL +M+     P+ VT G+++NG  +  R  +   ++ SM+  
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            F  N  IY+T+I+GL K     +A++++  M +KG + + V Y+ LI GL   G+  +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             +L +M+      N   +++L+  F + G   +A  ++K+M + + V N   Y+ LI+G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C  G L +A+ ++  M+S+GC PDVV Y+++I G C +  VE+ +KLF EM        
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM--TYQGLV 356

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
            D FTYN L++  C+   ++ +  + N M+D G  PD+VT NI L  L            
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN--------- 407

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                        +      +VE + +  +     T+  ++Q LCR  +++ A
Sbjct: 408 ------------GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 153/295 (51%), Gaps = 3/295 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++++ +   G +  A      +V  K   I PN + F  +I T  + G +  A  L+
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRK---IDPNVIFFTALIDTFVKEGNLLEARNLY 277

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           +EM  R+  P+++TY +L++G C    L +A  + D M   GCFP  VT+N LI G CK+
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
             +    KL   M  +G + +  TYNTLIHG C  G L+ A  + +RMV     P+ VTY
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +++ L   G+      ++  +++ +  V+   Y+ +I GL +  K ++A  L++ +  
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR 457

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           KG KP+ + Y  +I GLCR G   EA+++   M  +G   +   Y   ++  + S
Sbjct: 458 KGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 512



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 147/303 (48%), Gaps = 10/303 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF---IFKAYGKAHLVEEAIRLF 141
           T+ +LI   +NSG +     +L  M + K   ++ + IF   +   + K   + EA  L+
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRK---IDPNVIFFTALIDTFVKEGNLLEARNLY 277

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M+        V ++NS++N     G    A   ++ +V+       P+ +T+N +I  
Sbjct: 278 KEMIRR-SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK---GCFPDVVTYNTLITG 333

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+   V++ ++LF EM  +    D +TY TL+ G C+  +L+ A  + + M   G  P 
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+N+L++ LC NG++ +A  +V+++       + +TYN +I GLC    L +A  L  
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            +      P+ + Y T+I+GL + G   +  ++   M+E  F  +E IY   +   +   
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSL 513

Query: 382 KAE 384
            AE
Sbjct: 514 SAE 516


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 138/498 (27%), Positives = 240/498 (48%), Gaps = 41/498 (8%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
            + + H V     L H M  +F C   V +FN ++N     G    A+++ + +V +   
Sbjct: 256 GFCRQHRVVVGESLLHLM-PKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRS--- 311

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            + P+  TF  ++  +CR G V  A +LF  +      P+   Y TLMDG  K   + +A
Sbjct: 312 GVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQA 371

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
            LL +EM+  G  P  VTFN+L+ G  K G +  + +L+ ++ + G   +   Y+ ++  
Sbjct: 372 SLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSS 431

Query: 307 LCLKGNLDKAVSLLDR-----------------------------------MVASKCMPN 331
           LC  G LD+A+ LL                                     MV     P+
Sbjct: 432 LCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPS 491

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             T  +++ GL + G   +   +L  M E+ F +N+  Y+ L+ G FK    E A  LWK
Sbjct: 492 SSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWK 551

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M E+G  P+ V ++ALIDGL + G  +EA E+  EM   G   N F Y+SL++G  + G
Sbjct: 552 EMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCG 611

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +  +A+++ K+M +   + +   ++++I G C  G+++ A   +  M   G  PD+  ++
Sbjct: 612 RVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFN 671

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +I G C A  +  A ++ N+M        PD+ TYN  ++  C+   ++ ++ +L+ ++
Sbjct: 672 ILIGGYCKAFDMVGAGEIVNKMYSC--GLDPDITTYNTYMHGYCRMRKMNQAVIILDQLI 729

Query: 572 DRGCDPDLVTCNIFLTAL 589
             G  PD VT N  L+ +
Sbjct: 730 SAGIVPDTVTYNTMLSGI 747



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 225/480 (46%), Gaps = 16/480 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ LTFN +I   CR   V     L   MP   C PD+ T+  L++  C   R   A+  
Sbjct: 245 PSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDW 304

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M   G  P+  TF  +++ LC+ G +  A KL D +   G  PN   YNTL+ G   
Sbjct: 305 LHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFK 364

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              + +A  L + M  +   P+ VT+  ++ G  K GR  D  R+L  +      ++  +
Sbjct: 365 AREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSL 424

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y  ++S L   G+ ++AMKL ++++EKG   + V +++LI    R G  D+A E    M+
Sbjct: 425 YDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMV 484

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   ++ T +SL+ G    G   +A  +   M +     N+V Y+VL+ G  +   L 
Sbjct: 485 RCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLE 544

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A+ +W +M  RG  PD VA++++I GL  AG+VEEA ++F EM  +     P+ F YN 
Sbjct: 545 GAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAI--GFVPNNFAYNS 602

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+  LC    ++ ++ L   M  +G   D  T NI +     + +       FL+   I 
Sbjct: 603 LIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIG 662

Query: 610 L----FKRQRTSGGF----------KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           L    F      GG+          +IV  M    L P  +T+   +   CR +++  A+
Sbjct: 663 LLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAV 722



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 174/365 (47%), Gaps = 3/365 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + + FN +I    R GL D A + +R M      P   T  +L+ GLC++  L EA +LL
Sbjct: 456 SVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILL 515

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             M   G     V + VL++G  K   L  A  L   M  +G  P+ V +  LI GL   
Sbjct: 516 YRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKA 575

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           GN+++A  +   M A   +PN   Y ++I GL   GR  +  ++   M ++    + + +
Sbjct: 576 GNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTF 635

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + +I G  + G+ + A++ +  M   G  P+   ++ LI G C+      A EI+ +M +
Sbjct: 636 NIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYS 695

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   +  TY++ M G+    K ++AV I   +     V + V Y+ ++ G+C D  L  
Sbjct: 696 CGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDR 754

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A ++  ++L  G  P+V+  + ++   C  G  E+AL ++ + L  E     D  +Y IL
Sbjct: 755 AMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKAL-IWGQKL-REISFGFDEISYRIL 812

Query: 551 LNALC 555
             A C
Sbjct: 813 DQAYC 817



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 198/481 (41%), Gaps = 51/481 (10%)

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
           E D     TL+ G        EA+ +L  M+  G  P   +  +L+  L + G+ G   K
Sbjct: 174 ESDFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWK 233

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           L  +M  KG  P+ +T+N +I G C +  +    SLL  M    C P+ VT+  +IN   
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
             GR       L  M       +   ++T++  L +EG   +A KL+  + + G  PN  
Sbjct: 294 IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAA 353

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           +Y+ L+DG  +  +  +A  +  EM   G + +  T++ L+ G ++ G+   +  + KD+
Sbjct: 354 IYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDL 413

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI--------- 514
             +    +   Y V++  LC  G+L EA  +  ++L +G    VVA++S+I         
Sbjct: 414 IVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLE 473

Query: 515 --------------------------HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
                                      GLC  G ++EA  L   M  LE     +   Y 
Sbjct: 474 DKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRM--LEKGFPINKVAYT 531

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           +LL+   K +N+  +  L   M +RG  PD V     +  L +     +    FL   AI
Sbjct: 532 VLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAI 591

Query: 609 RLFKRQ--------------RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                               R +   K+ + M QK L   T T+  ++   CR  +++ A
Sbjct: 592 GFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFA 651

Query: 655 I 655
           I
Sbjct: 652 I 652



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 6/269 (2%)

Query: 106 LYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           L++  +E+ +  +  +F  +     KA  VEEA  +F  M           ++NS++  +
Sbjct: 549 LWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNF-AYNSLIRGL 607

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
              G    AL+    +   +   +L +T TFN++I   CR G +  AI+ F +M      
Sbjct: 608 CDCGRVTEALKLEKEM---RQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLL 664

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           PDI+T+  L+ G CK   +  A  ++++M   G  P   T+N  ++G C+  ++ +A  +
Sbjct: 665 PDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVII 724

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           +D +   G +P+ VTYNT++ G+C    LD+A+ L  +++    +PN +T   +++   K
Sbjct: 725 LDQLISAGIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCK 783

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            G           + E  F  +E  Y  L
Sbjct: 784 QGMPEKALIWGQKLREISFGFDEISYRIL 812


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 221/417 (52%), Gaps = 5/417 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ +V ++     P+ + FN ++  + +L   D  I L ++M V     D+YT+  
Sbjct: 69  AIDLFSDMVKSRP---FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++  C   ++  A+ +L +M   G  P  VT   L+NG C+   +  A  LVD M   G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ V YN +I  LC    ++ A      +      PN VTY  ++NGL    R  D A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R+L  M ++K   N   YS L+    K GK  +A +L+++M+     P+ V YS+LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   + DEA ++   M++ GC A+  +Y++L+ GF ++ +    ++++++M++   V N 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LI G  + G + +A+  ++QM   G  PD+  Y+ ++ GLC+ G +E+AL +F +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           M   + +   D+ TY  ++  +CK   +  +  L  S+  +G  PD+VT    ++ L
Sbjct: 426 M--QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 207/391 (52%), Gaps = 10/391 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T   ++   CR   V +A+ L  +M     +PDI  Y  ++D LCK  R+++A   
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             E++  G  P  VT+  L+NGLC +     AA+L+ +M  K   PN +TY+ L+     
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G + +A  L + MV     P+ VTY ++INGL    R  +  ++   M  +    +   
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  K  + ED MKL+++M ++G   NTV Y+ LI G  + G  D+A+E   +M 
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G + + +TY+ L+ G  ++G+  KA+ I++DM K     + V Y+ +I G+C+ GK+ 
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  ++  +  +G KPD+V Y++M+ GLC  G + E   L+ +M       Q  +   + 
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM------KQEGLMKNDC 506

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            L+      +I+ S +L+  M+  G  P L+
Sbjct: 507 TLS----DGDITLSAELIKKMLSCGYAPSLL 533



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 193/382 (50%), Gaps = 2/382 (0%)

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           KT  R   +++AI LF +M      P I  +  L+  + K  + D  + L  +M+V G  
Sbjct: 58  KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
               TFN++IN  C   ++  A  ++  M   G  P+ VT  +L++G C +  +  AVSL
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           +D+MV     P+ V Y  II+ L K  R  D       +E +    N   Y+ L++GL  
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             +  DA +L   M++K   PN + YSAL+D   + GK  EA+E+  EM+      +  T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YSSL+ G     +  +A +++  M    C+ + V Y+ LI+G C+  ++ +   ++ +M 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            RG   + V Y+++I G   AG V++A + F++M        PD++TYNILL  LC    
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI--SPDIWTYNILLGGLCDNGE 415

Query: 560 ISHSIDLLNSMMDRGCDPDLVT 581
           +  ++ +   M  R  D D+VT
Sbjct: 416 LEKALVIFEDMQKREMDLDIVT 437



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 211/422 (50%), Gaps = 27/422 (6%)

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           ++ +L++A+ L  +M     FP+ V FN L++ + K  +      L   M + G   +  
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T+N +I+  C    +  A+S+L +M+     P+ VT G+++NG  +  R  D   ++  M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E  +  +   Y+ +I  L K  +  DA   +K++  KG +PN V Y+AL++GLC   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            +A  +L +MI      N  TYS+L+  F ++GK  +A E++++M + +   + V YS L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I+GLC   ++ EA  ++  M+S+GC  DVV+Y+++I+G C A  VE+ +KLF EM   + 
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM--SQR 359

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
               +  TYN L+    +  ++  + +  + M   G  PD+ T NI L  L +  E  + 
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK- 418

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
                                  I E M ++ +     T+  V++ +C+  +++ A    
Sbjct: 419 --------------------ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA---- 454

Query: 659 WS 660
           WS
Sbjct: 455 WS 456



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 157/318 (49%), Gaps = 4/318 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  +  K   V +A   F   ++    +  V ++ +++N +     +  A    + ++  
Sbjct: 196 IIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I PN +T++ ++    + G V  A +LF EM   + +PDI TY +L++GLC  +R+
Sbjct: 255 K---ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEA  + D M   GC    V++N LING CK   +    KL   M  +G + N VTYNTL
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G    G++DKA     +M      P+  TY  ++ GL   G       +   M++R+ 
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            ++   Y+T+I G+ K GK E+A  L+  +  KG KP+ V Y+ ++ GLC  G   E E 
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491

Query: 424 ILFEMINNGCAANAFTYS 441
           +  +M   G   N  T S
Sbjct: 492 LYTKMKQEGLMKNDCTLS 509



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 188/395 (47%), Gaps = 14/395 (3%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   + + + V +A+ L   MV E   K  + ++N++++ + +    + A +F+  I   
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMV-EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI--- 216

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   I PN +T+  ++  +C      +A +L  +M  +   P++ TY  L+D   K  ++
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  L +EM      P  VT++ LINGLC +  +  A ++ D M  KGCL + V+YNTL
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I+G C    ++  + L   M     + N VTY T+I G  + G           M+    
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             + + Y+ L+ GL   G+ E A+ +++ M ++    + V Y+ +I G+C+ GK +EA  
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +   +   G   +  TY+++M G    G  H+   ++  M +   + N+   S       
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS------- 509

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
            DG +  +  +  +MLS G  P ++    +  G+C
Sbjct: 510 -DGDITLSAELIKKMLSCGYAPSLL--KDIKSGVC 541


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 160/594 (26%), Positives = 281/594 (47%), Gaps = 42/594 (7%)

Query: 30  IPSERS---HRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDS-- 84
           +P  RS   H F  V + V+      ++  G A      +  +FN+  ++G  +L     
Sbjct: 41  LPRARSASVHAFNRVLTVVAHGDSSSSQRHGAA-----LAVSLFNTMAQVGVNKLATDAC 95

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-------------SFIFIFKAYGKA 131
           TF  LI+ + N G    L+  L    R  R  +               S+  +     K 
Sbjct: 96  TFGILIRCFCNVG---LLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKE 152

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM----- 186
             V++A  LFH M+ +      V ++NSV++ + +     +A      + +   +     
Sbjct: 153 GEVDKAYTLFHEMLGQGFPPNIV-TYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVR 211

Query: 187 --------NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
                    + P+ +T++L+I   C++G    A  +F  M  R   PD YTY TL+ G  
Sbjct: 212 LLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYA 271

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
            +  L +   LL  M  DG       FN+LI    KN  L +A      M  KG  PN V
Sbjct: 272 TKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVV 331

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY T+I  LC  G ++ AVS   +MV+    P+ +T+ ++I+GL  +G      ++   M
Sbjct: 332 TYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEM 391

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             R  H N    +T++  L KEG+  +A   + Q++  G KP+ V Y+ LIDG C  GK 
Sbjct: 392 INRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKM 451

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           DE+ ++L  M++ G   +  TYS+L+ G+ ++G+   A+ ++++M   +   N + Y+++
Sbjct: 452 DESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNII 511

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           +HGL   G++  AR  + +++  G +  +  Y+ ++ GLC    V+EAL++F  +   E 
Sbjct: 512 LHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKE- 570

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
             Q +V T+NI++  L K   I  +  L ++++  G  PD +   + + +  E+
Sbjct: 571 -FQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEE 623



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 201/393 (51%), Gaps = 19/393 (4%)

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           + T++  +  K  +   + +L ++IQ+G+    LE  +H+              FN++I+
Sbjct: 263 YRTLLHGYATKGALVDMHDLLALMIQDGI---PLE--DHV--------------FNILIR 303

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
              +   +D A+  F EM  +   P++ TY T++D LCK  R+++AV    +M  +G  P
Sbjct: 304 AYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSP 363

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             +TF  LI+GLC  GE  +  KL   M  +G  PN +  NT++  LC +G + +A    
Sbjct: 364 DIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFF 423

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           D+++     P+ V+Y  +I+G    G+  +  ++L  M       +   YS L++G  K 
Sbjct: 424 DQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKN 483

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ +DA+ L+++M  K  KPN + Y+ ++ GL   G+   A E   +++++G      TY
Sbjct: 484 GRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTY 543

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + ++ G  E+    +A+ +++ +           ++++I GL + G++ +A+ +++ +L 
Sbjct: 544 NIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILP 603

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            G  PD + Y  MI      G +EE+ +LF  M
Sbjct: 604 SGLVPDAIIYGLMIQSHIEEGLLEESDELFLSM 636



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 123/267 (46%), Gaps = 44/267 (16%)

Query: 431 NGCAANAFTYSSLMKGFF-----------ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           N  A +A T+  L++ F            ES     AV +  D   N C  N + Y+++I
Sbjct: 88  NKLATDACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYN-CPPNVLSYNMVI 146

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA----------------GSV 523
           +GL ++G++ +A  ++ +ML +G  P++V Y+S+I GLC A                G +
Sbjct: 147 NGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQL 206

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           EEA++L  +M       QPDV TY++L++  CK    + + ++ +SM+ RG +PD  T  
Sbjct: 207 EEAVRLLKKMSG--GGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYR 264

Query: 584 IFLTALKEKLEAP----------QDGT---DFLNELAIRLFKRQRT-SGGFKIVEVMLQK 629
             L     K              QDG    D +  + IR + +  T          M QK
Sbjct: 265 TLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQK 324

Query: 630 FLSPQTSTWERVVQELCRPKRIQAAIN 656
             SP   T+  V+  LC+  R++ A++
Sbjct: 325 GFSPNVVTYTTVIDILCKAGRVEDAVS 351


>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
          Length = 709

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 146/505 (28%), Positives = 251/505 (49%), Gaps = 44/505 (8%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  +  +Y +A  +  A+R+   M  +  C   +   N  +NV++  G   +ALEF   +
Sbjct: 166 FAHLMLSYSRAGKLRSAMRVLQLMQKD-GCAPDICICNVAVNVLVVAGRVDKALEFAERM 224

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              + + + P+ +T+N +IK +C    +  A+++   M    C PD  +Y T+M  LCKE
Sbjct: 225 ---RRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKE 281

Query: 241 NRLDEAVLLLDEMQVD-GCFPTPVTFNVLINGL--------------------------- 272
            R+ E   LL+ M+ D G FP  +T+N+LI+GL                           
Sbjct: 282 KRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVG 341

Query: 273 --------CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
                   C NG +  A +++  M  KGC P+ VTY+ ++ G C  G LD+A  ++  M 
Sbjct: 342 YSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMY 401

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C PN VT+  ++NGL K+G++ +   +L   EE  +  +   YS ++ G  +EGK  
Sbjct: 402 KNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLV 461

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           ++  +  QM++KG  P  V  + LI  LC+  KP  A++ + +  + GC  N   +++++
Sbjct: 462 ESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVI 521

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            GF   G    A+ +  DM   N   + V Y+V++  L   GK++EA  +  +ML+RG  
Sbjct: 522 HGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLL 581

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P  V Y ++IH  C  G+VE+ L L ++ML  +  S      YN ++  LC    +S + 
Sbjct: 582 PTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTKQGFSS----AYNQVIEKLCAFGKLSEAY 637

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTAL 589
           +LL+ ++      D  TC+I + + 
Sbjct: 638 NLLSKVLRSASKRDAQTCHILMDSF 662



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 228/479 (47%), Gaps = 19/479 (3%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            F+ ++  + R  L D A ++ R M  R        +  LM    +  +L  A+ +L  M
Sbjct: 130 VFDEMLALLSRTRLHDPARRVVRLMIRRGIRRGTRQFAHLMLSYSRAGKLRSAMRVLQLM 189

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           Q DGC P     NV +N L   G + +A +  + M   G  P+ VTYN LI GLC    +
Sbjct: 190 QKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRI 249

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME-ERKFHVNEYIYST 372
            +A+ ++  M+ + C P++++Y T+++ L K  R  +   +L  M  +     ++  Y+ 
Sbjct: 250 VEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNM 309

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI GL K G A++A+   ++   K  + + V YSA++   C  G+  EA+EI+ EMI+ G
Sbjct: 310 LIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKG 369

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
           C  +  TYS+++ GF   G+  +A ++ K M KN C  N V ++ L++GLC+ GK  EA 
Sbjct: 370 CRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAW 429

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +       P  + YS ++HG    G + E+  +  +M  L+    P     N+L++
Sbjct: 430 ELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQM--LQKGFFPTAVEINLLIH 487

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR--- 609
           ALCK+   + + D +     +GC  ++V     +     + +  +     L+++ +    
Sbjct: 488 ALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDL-ESALSLLDDMYLTNRH 546

Query: 610 ------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                       L ++ +      +VE ML + L P   T+  V+   C    ++  +N
Sbjct: 547 PDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLN 605



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 159/355 (44%), Gaps = 29/355 (8%)

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G L  A+ +L  M    C P+       +N LV  GR          M       +   Y
Sbjct: 177 GKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGVDPDVVTY 236

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI GL    +  +A+++   M++ GC P+ + Y  ++  LC+  +  E   +L  M N
Sbjct: 237 NCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLERMRN 296

Query: 431 N-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   +  TY+ L+ G  + G   +A+   ++        ++V YS ++H  C +G++ 
Sbjct: 297 DAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMS 356

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA+ +  +M+S+GC+PDVV YS+++ G C  G +++A K+   M   +   +P+  T+  
Sbjct: 357 EAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHM--YKNGCKPNTVTHTA 414

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           LLN LCK    S + +LLN   +    P  +T ++ +                       
Sbjct: 415 LLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHG--------------------- 453

Query: 610 LFKRQ-RTSGGFKIVEVMLQKFLSPQTSTWERVVQELC---RPKRIQAAINKCWS 660
            F+R+ +      +V  MLQK   P       ++  LC   +P R +  + +C S
Sbjct: 454 -FRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQS 507



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 5/237 (2%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T    N +++ + +E    RA +F       +      N + F  VI    R G +++A+
Sbjct: 478 TAVEINLLIHALCKEQKPARAKDFME---QCQSKGCFINVVNFTTVIHGFSRQGDLESAL 534

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L  +M + N  PD+ TY  ++D L ++ ++ EA  L+++M   G  PTPVT+  +I+  
Sbjct: 535 SLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYRTVIHRY 594

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C+ G +     L+D M  K    +   YN +I  LC  G L +A +LL +++ S    + 
Sbjct: 595 CEKGAVEDLLNLLDKMLTKQGFSS--AYNQVIEKLCAFGKLSEAYNLLSKVLRSASKRDA 652

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
            T   +++  +  G  +    V   M +R    +  +   + S L   G+   A KL
Sbjct: 653 QTCHILMDSFLNRGLPLQSYNVACRMFQRNLIPDLKLCQKVDSQLALVGERHAAGKL 709


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 227/432 (52%), Gaps = 5/432 (1%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C      ++ ++ V ++EG+   +LE +  ++     N  P+  T N ++ +V + G   
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFN--PSVYTCNAILGSVVKSGEDV 175

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +     +EM  R   PD+ T+  L++ LC E   +++  L+ +M+  G  PT VT+N ++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           +  CK G    A +L+D+M  KG   +  TYN LIH LC    + K   LL  M      
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PNEVTY T+ING    G+ +  +++L  M       N   ++ LI G   EG  ++A+K+
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +  M  KG  P+ V Y  L+DGLC+  + D A      M  NG      TY+ ++ G  +
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           +G   +AV +  +M+K+    + V YS LI+G C+ G+ + A+ +  ++   G  P+ + 
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           YS++I+  C  G ++EA++++  M+ LE  ++ D FT+N+L+ +LCK   ++ + + +  
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMI-LEGHTR-DHFTFNVLVTSLCKAGKVAEAEEFMRC 533

Query: 570 MMDRGCDPDLVT 581
           M   G  P+ V+
Sbjct: 534 MTSDGILPNTVS 545



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 213/440 (48%), Gaps = 5/440 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T+ ++N+VL+   ++G +  A+E  +H+   K   +  +  T+N++I  +CR   +    
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHM---KSKGVDADVCTYNMLIHDLCRSNRIAKGY 283

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L R+M  R   P+  TY TL++G   E ++  A  LL+EM   G  P  VTFN LI+G 
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
              G    A K+   M  KG  P+EV+Y  L+ GLC     D A     RM  +      
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           +TY  +I+GL K G   +   +L  M +     +   YS LI+G  K G+ + A ++  +
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           +   G  PN ++YS LI   CR+G   EA  I   MI  G   + FT++ L+    ++GK
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A E  + M  +  + N V +  LI+G    G+  +A  V+ +M   G  P    Y S
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           ++ GLC  G + EA K    +  +   +  D   YN LL A+CK  N++ ++ L   M+ 
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVP--AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 641

Query: 573 RGCDPDLVTCNIFLTALKEK 592
           R   PD  T    ++ L  K
Sbjct: 642 RSILPDSYTYTSLISGLCRK 661



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 147/585 (25%), Positives = 254/585 (43%), Gaps = 19/585 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +++  Y   G FK+   +L  M+ +       ++  +     +++ + +   L   M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    V ++N+++N    EG    A +  N +++     + PN +TFN +I     
Sbjct: 290 RKRMIHPNEV-TYNTLINGFSNEGKVLIASQLLNEMLS---FGLSPNHVTFNALIDGHIS 345

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G    A+++F  M  +   P   +Y  L+DGLCK    D A      M+ +G     +T
Sbjct: 346 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 405

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +I+GLCKNG L  A  L++ M   G  P+ VTY+ LI+G C  G    A  ++ R+ 
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PN + Y T+I    ++G   +  R+  +M       + + ++ L++ L K GK  
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A +  + M   G  PNTV +  LI+G    G+  +A  +  EM   G     FTY SL+
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           KG  + G   +A +  K +       + V Y+ L+  +C+ G L +A  ++ +M+ R   
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD   Y+S+I GLC  G    A+ LF +         P+   Y   ++ + K       I
Sbjct: 646 PDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGI 704

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKE--KLE---------APQDGTDFLNELAIRLF-- 611
                M + G  PD+VT N  +       K+E           Q+G   L    I L   
Sbjct: 705 YFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY 764

Query: 612 -KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            KR+  S  F +   ++   + P   T   +V  +C    ++  +
Sbjct: 765 SKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 131/566 (23%), Positives = 242/566 (42%), Gaps = 48/566 (8%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            TF  L+     +G     E  +  M  +  +    SF  +   YG +    +A  +F  M
Sbjct: 510  TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP---NTLTFNLVIKT 201
                H   T  ++ S+L  + + G    A +F       K ++ +P   +T+ +N ++  
Sbjct: 570  TKVGH-HPTFFTYGSLLKGLCKGGHLREAEKFL------KSLHAVPAAVDTVMYNTLLTA 622

Query: 202  VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ------- 254
            +C+ G +  A+ LF EM  R+  PD YTY +L+ GLC++ +   A+L   E +       
Sbjct: 623  MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 682

Query: 255  --------VDGCF---------------------PTPVTFNVLINGLCKNGELGRAAKLV 285
                    VDG F                     P  VT N +I+G  + G++ +   L+
Sbjct: 683  NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 742

Query: 286  DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
              M  +   PN  TYN L+HG   + ++  +  L   ++ +  +P+++T  +++ G+ + 
Sbjct: 743  PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 802

Query: 346  GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
                 G ++L +   R   V+ Y ++ LIS     G+   A  L K M   G   +    
Sbjct: 803  NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTC 862

Query: 406  SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
             A++  L R  +  E+  +L EM   G +  +  Y  L+ G    G    A  + ++M  
Sbjct: 863  DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 922

Query: 466  NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
            +      V  S ++  L + GK  EA ++   ML     P + ++++++H  C  G+V E
Sbjct: 923  HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 982

Query: 526  ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            AL+L   ++      + D+ +YN+L+  LC + +++ + +L   M   G   +  T    
Sbjct: 983  ALEL--RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040

Query: 586  LTALKEKLEAPQDGTDFLNELAIRLF 611
            +  L  +  A       L +L  R F
Sbjct: 1041 IRGLLARETAFSGADIILKDLLARGF 1066



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 23/184 (12%)

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  N   Y +LI     +G ++++  ++  M   G  P V   ++++  +  +G      
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
               EML  + K  PDV T+NIL+N LC + +   S  L+  M   G  P +VT N  L 
Sbjct: 179 SFLKEML--KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                                   K+ R     ++++ M  K +     T+  ++ +LCR
Sbjct: 237 ---------------------WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 648 PKRI 651
             RI
Sbjct: 276 SNRI 279


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  221 bits (564), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 227/432 (52%), Gaps = 5/432 (1%)

Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           C      ++ ++ V ++EG+   +LE +  ++     N  P+  T N ++ +V + G   
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFN--PSVYTCNAILGSVVKSGEDV 175

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +     +EM  R   PD+ T+  L++ LC E   +++  L+ +M+  G  PT VT+N ++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           +  CK G    A +L+D+M  KG   +  TYN LIH LC    + K   LL  M      
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           PNEVTY T+ING    G+ +  +++L  M       N   ++ LI G   EG  ++A+K+
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +  M  KG  P+ V Y  L+DGLC+  + D A      M  NG      TY+ ++ G  +
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           +G   +AV +  +M+K+    + V YS LI+G C+ G+ + A+ +  ++   G  P+ + 
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           YS++I+  C  G ++EA++++  M+ LE  ++ D FT+N+L+ +LCK   ++ + + +  
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMI-LEGHTR-DHFTFNVLVTSLCKAGKVAEAEEFMRC 533

Query: 570 MMDRGCDPDLVT 581
           M   G  P+ V+
Sbjct: 534 MTSDGILPNTVS 545



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 213/440 (48%), Gaps = 5/440 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T+ ++N+VL+   ++G +  A+E  +H+   K   +  +  T+N++I  +CR   +    
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHM---KSKGVDADVCTYNMLIHDLCRSNRIAKGY 283

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L R+M  R   P+  TY TL++G   E ++  A  LL+EM   G  P  VTFN LI+G 
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
              G    A K+   M  KG  P+EV+Y  L+ GLC     D A     RM  +      
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           +TY  +I+GL K G   +   +L  M +     +   YS LI+G  K G+ + A ++  +
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           +   G  PN ++YS LI   CR+G   EA  I   MI  G   + FT++ L+    ++GK
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +A E  + M  +  + N V +  LI+G    G+  +A  V+ +M   G  P    Y S
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           ++ GLC  G + EA K    +  +   +  D   YN LL A+CK  N++ ++ L   M+ 
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVP--AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 641

Query: 573 RGCDPDLVTCNIFLTALKEK 592
           R   PD  T    ++ L  K
Sbjct: 642 RSILPDSYTYTSLISGLCRK 661



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 137/514 (26%), Positives = 228/514 (44%), Gaps = 18/514 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++N    EG    A +  N +++     + PN +TFN +I      G    A+++F
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLS---FGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             M  +   P   +Y  L+DGLCK    D A      M+ +G     +T+  +I+GLCKN
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G L  A  L++ M   G  P+ VTY+ LI+G C  G    A  ++ R+      PN + Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+I    ++G   +  R+  +M       + + ++ L++ L K GK  +A +  + M  
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G  PNTV +  LI+G    G+  +A  +  EM   G     FTY SL+KG  + G   +
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A +  K +       + V Y+ L+  +C+ G L +A  ++ +M+ R   PD   Y+S+I 
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  G    A+ LF +         P+   Y   ++ + K       I     M + G 
Sbjct: 657 GLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 715

Query: 576 DPDLVTCNIFLTALKE--KLE---------APQDGTDFLNELAIRLF---KRQRTSGGFK 621
            PD+VT N  +       K+E           Q+G   L    I L    KR+  S  F 
Sbjct: 716 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 775

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +   ++   + P   T   +V  +C    ++  +
Sbjct: 776 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 131/566 (23%), Positives = 242/566 (42%), Gaps = 48/566 (8%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            TF  L+     +G     E  +  M  +  +    SF  +   YG +    +A  +F  M
Sbjct: 510  TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP---NTLTFNLVIKT 201
                H   T  ++ S+L  + + G    A +F       K ++ +P   +T+ +N ++  
Sbjct: 570  TKVGH-HPTFFTYGSLLKGLCKGGHLREAEKFL------KSLHAVPAAVDTVMYNTLLTA 622

Query: 202  VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ------- 254
            +C+ G +  A+ LF EM  R+  PD YTY +L+ GLC++ +   A+L   E +       
Sbjct: 623  MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 682

Query: 255  --------VDGCF---------------------PTPVTFNVLINGLCKNGELGRAAKLV 285
                    VDG F                     P  VT N +I+G  + G++ +   L+
Sbjct: 683  NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 742

Query: 286  DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
              M  +   PN  TYN L+HG   + ++  +  L   ++ +  +P+++T  +++ G+ + 
Sbjct: 743  PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 802

Query: 346  GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
                 G ++L +   R   V+ Y ++ LIS     G+   A  L K M   G   +    
Sbjct: 803  NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTC 862

Query: 406  SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
             A++  L R  +  E+  +L EM   G +  +  Y  L+ G    G    A  + ++M  
Sbjct: 863  DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 922

Query: 466  NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
            +      V  S ++  L + GK  EA ++   ML     P + ++++++H  C  G+V E
Sbjct: 923  HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 982

Query: 526  ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
            AL+L   ++      + D+ +YN+L+  LC + +++ + +L   M   G   +  T    
Sbjct: 983  ALEL--RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040

Query: 586  LTALKEKLEAPQDGTDFLNELAIRLF 611
            +  L  +  A       L +L  R F
Sbjct: 1041 IRGLLARETAFSGADIILKDLLARGF 1066



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 23/184 (12%)

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  N   Y +LI     +G ++++  ++  M   G  P V   ++++  +  +G      
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
               EML  + K  PDV T+NIL+N LC + +   S  L+  M   G  P +VT N  L 
Sbjct: 179 SFLKEML--KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                                   K+ R     ++++ M  K +     T+  ++ +LCR
Sbjct: 237 W---------------------YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275

Query: 648 PKRI 651
             RI
Sbjct: 276 SNRI 279


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 223/424 (52%), Gaps = 6/424 (1%)

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           +NH++   H N  P T  FN ++ ++ +      A+ L ++M +   E D +T+  L++ 
Sbjct: 48  FNHLL--LHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINC 105

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
             +      +  +  ++   G  PT +TFN LI GLC  G + +A    D +  +G   +
Sbjct: 106 FSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLD 165

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
           +V+Y TLI+GLC  G +  A+ LL R+      PN V Y  II+ + K     D   +  
Sbjct: 166 QVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYS 225

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M  ++   + + Y+ LISG     K   A+ L+ +M ++   PN   ++ L+DG C+ G
Sbjct: 226 QMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEG 285

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K ++A+ +L  M+ +    +  TY+SLM G+    K +KA +I+  MA    + N   Y+
Sbjct: 286 KVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYT 345

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            +++G C+   + EA  ++ +M  R   P+VV YSS+I GLC  G +  ALKL +EM   
Sbjct: 346 TMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEM--H 403

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLE 594
           +    P++ TY+ +L+ALCK  ++  +I LL ++ D+G  PD+ T  I +  L +  +LE
Sbjct: 404 DRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLE 463

Query: 595 APQD 598
             Q+
Sbjct: 464 DAQN 467



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 250/493 (50%), Gaps = 18/493 (3%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           FN +L+ +++   +  AL  +  +   +   I  +  TFN++I    +LGL   +  +F 
Sbjct: 64  FNKILSSLVKAKHHSTALSLHQQM---ELNGIESDFFTFNILINCFSQLGLNSLSFSIFA 120

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           ++  +   P   T+ TL+ GLC +  + +A+   D++   G     V++  LINGLCK G
Sbjct: 121 KILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVG 180

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            +  A +L+  +  K   PN V YN +I  +C    ++ A  L  +MVA +  P+  TY 
Sbjct: 181 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYN 240

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +I+G   + +      +   M++   + N Y ++ L+ G  KEGK  DA  +   MM+ 
Sbjct: 241 ALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKD 300

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
             KP+ V Y++L+DG C + K ++A++I   M + G  AN   Y++++ GF +     +A
Sbjct: 301 DIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEA 360

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + ++++M     + N V YS LI GLC+ G++  A  +  +M  RG  P++V YSS++  
Sbjct: 361 INLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDA 420

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC    V++A+ L   +   +   +PD++TY IL+  LC+   +  + ++   ++ +G +
Sbjct: 421 LCKNHHVDKAIALLTNL--KDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYN 478

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG---GFKIVE-VMLQKFLS 632
            D+    + +    +K         F ++ A+ L  +   +G     K  E V+L  F  
Sbjct: 479 LDVYAYTVMIQGFCDK--------GFFDK-ALALLSKMEDNGCIPNAKTYELVILSLFEK 529

Query: 633 PQTSTWERVVQEL 645
            +  T E++++E+
Sbjct: 530 DENDTAEKLLREM 542



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/449 (29%), Positives = 228/449 (50%), Gaps = 24/449 (5%)

Query: 209 DNAIQLFREMPV-RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +N I  F  + + +N  P  + +  ++  L K      A+ L  +M+++G      TFN+
Sbjct: 42  NNLISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNI 101

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LIN   + G    +  +   +  KG  P  +T+NTLI GLCLKG++ +A+   D++VA  
Sbjct: 102 LINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQG 161

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
              ++V+YGT+INGL K+GR     ++L  ++ +    N  +Y+ +I  + K     DA 
Sbjct: 162 FHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAF 221

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+ QM+ K   P+   Y+ALI G   V K + A ++  +M       N +T++ L+ GF
Sbjct: 222 DLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGF 281

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + GK + A  +   M K++   + V Y+ L+ G C   K+ +A+ ++  M S G   +V
Sbjct: 282 CKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANV 341

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
             Y++M++G C    V+EA+ LF EM C   K  P+V TY+ L++ LCK   I +++ L+
Sbjct: 342 QIYTTMVNGFCKIKMVDEAINLFEEMRC--RKIIPNVVTYSSLIDGLCKLGRIFYALKLV 399

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVML 627
           + M DRG  P++VT +  L AL +     +         AI L    +  G         
Sbjct: 400 DEMHDRGQPPNIVTYSSILDALCKNHHVDK---------AIALLTNLKDQG--------- 441

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              + P   T+  +++ LC+  R++ A N
Sbjct: 442 ---IRPDMYTYTILIKGLCQSGRLEDAQN 467



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 212/406 (52%), Gaps = 7/406 (1%)

Query: 130 KAHLVEEAIRLFHTMVDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           K H + +A+     +V + FH  +   S+ +++N + + G    AL+     V+ K +  
Sbjct: 144 KGH-IHQALHFHDKVVAQGFHLDQV--SYGTLINGLCKVGRITAALQLLKR-VDGKLVQ- 198

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN + +N++I  +C+  LV++A  L+ +M  +   PD++TY  L+ G    ++L+ A+ 
Sbjct: 199 -PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAID 257

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L ++M+ +   P   TFN+L++G CK G++  A  ++  M      P+ VTYN+L+ G C
Sbjct: 258 LFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYC 317

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
               ++KA  + D M +   + N   Y T++NG  K+    +   +   M  RK   N  
Sbjct: 318 SINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVV 377

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YS+LI GL K G+   A+KL  +M ++G  PN V YS+++D LC+    D+A  +L  +
Sbjct: 378 TYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNL 437

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            + G   + +TY+ L+KG  +SG+   A  +++D+       +   Y+V+I G C+ G  
Sbjct: 438 KDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFF 497

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
            +A  + ++M   GC P+   Y  +I  L      + A KL  EM+
Sbjct: 498 DKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMI 543



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 189/346 (54%), Gaps = 3/346 (0%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N +++ + +  L + A + Y+ +V  +   I P+  T+N +I     +  ++ AI LF 
Sbjct: 204 YNMIIDNMCKAKLVNDAFDLYSQMVAKR---ICPDVFTYNALISGFSAVSKLNYAIDLFN 260

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M   N  P++YT+  L+DG CKE ++++A ++L  M  D   P  VT+N L++G C   
Sbjct: 261 KMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSIN 320

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           ++ +A  + D+M   G + N   Y T+++G C    +D+A++L + M   K +PN VTY 
Sbjct: 321 KVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYS 380

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           ++I+GL KLGR     +++  M +R    N   YS+++  L K    + A+ L   + ++
Sbjct: 381 SLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQ 440

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G +P+   Y+ LI GLC+ G+ ++A+ +  +++  G   + + Y+ +++GF + G   KA
Sbjct: 441 GIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKA 500

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           + +   M  N C+ N   Y ++I  L E  +   A  +  +M+ RG
Sbjct: 501 LALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 88/161 (54%), Gaps = 8/161 (4%)

Query: 139 RLFHTM--VDEFHCK---RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           R+F+ +  VDE H +     + +++S+L+ + +     +A+     + N K   I P+  
Sbjct: 391 RIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIAL---LTNLKDQGIRPDMY 447

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+ ++IK +C+ G +++A  +F ++ V+    D+Y Y  ++ G C +   D+A+ LL +M
Sbjct: 448 TYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKM 507

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           + +GC P   T+ ++I  L +  E   A KL+  M ++G L
Sbjct: 508 EDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGLL 548


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/486 (31%), Positives = 246/486 (50%), Gaps = 15/486 (3%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++ AI  F+ M+       TV  FN +L  I +   +H  L   +H +++    I PN  
Sbjct: 42  IDGAISSFNRMLRMQPPPSTV-DFNKLLTSIAKMK-HHSTLLSLSHQMDS--FGIPPNIY 97

Query: 194 TFNLVIKTVCRL--GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T +++I + C L  G +  A+ LF +M      PD+ TY TL++GLCK      A+ LL 
Sbjct: 98  TLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLG 157

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            M    C P    +N +I+ LCK+ ++  A  L   M  KG  P+  TYN+LIH LC   
Sbjct: 158 SMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLC 217

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI-Y 370
                 +LL+ MV SK MP+ V++ T+++ L K G+  +   V+  M +R   +   I Y
Sbjct: 218 EWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISY 277

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI+G  K  + + AM L+ +M  +   P+TV YS LI GLC V +  +A  +  EM+ 
Sbjct: 278 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 337

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
                N  TY  L+    ++    +A+ + K +  +N   +    ++ I G+C  G+L  
Sbjct: 338 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 397

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           AR +++ + S+G +PDV  YS MI+GLC  G ++EA KLF EM   E     +   YN +
Sbjct: 398 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM--DENGCTLNGCIYNTI 455

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
                + +  S +I LL  M+ RG   D  T  +F+  L +      DG D   +  +R 
Sbjct: 456 TRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD------DGLDQSLKQILRD 509

Query: 611 FKRQRT 616
           F +Q++
Sbjct: 510 FCKQKS 515



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 141/289 (48%), Gaps = 26/289 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV--GKPDEAEEILFE 427
           ++ L++ + K       + L  QM   G  PN      LI+  C +  GK  EA  +  +
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDK 123

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           MI  G   +  TY +L+ G  + G    A+ +   M + NC  N   Y+ +I  LC+D +
Sbjct: 124 MIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQ 183

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + EA  ++++M+++G  PD+  Y+S+IH LCN    +    L NEM+  + K  PDV ++
Sbjct: 184 VTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMV--DSKIMPDVVSF 241

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRG-CDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           N +++ALCK+  ++ + D+++ M+ RG C P++++ N  +                    
Sbjct: 242 NTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGY----------------- 284

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                K QR      +   M ++ L P T T+  ++  LC  +R+Q AI
Sbjct: 285 ----CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 329



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 25/164 (15%)

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           + +ML     P  V ++ ++  +         L L ++M        P+++T +IL+N+ 
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSF--GIPPNIYTLHILINSF 106

Query: 555 C--KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
           C   +  I  ++ L + M+  G  PD+VT    +  L                      K
Sbjct: 107 CHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGL---------------------CK 145

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              TS   +++  M+QK   P    +  ++  LC+ +++  A N
Sbjct: 146 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 189


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 246/477 (51%), Gaps = 13/477 (2%)

Query: 103 EMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN 162
           E+VL   R + +  +   F F+ + Y +  +V+EAI  F+ M ++    +T ++ N +L+
Sbjct: 143 ELVLAHDRLQTKSTI--LFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKT-ETCNHILS 199

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
           ++ +      A  FY    +   M I  N  TFN++I  +C+ G +  A      M    
Sbjct: 200 LLSRLNRIENAWVFY---ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFG 256

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
            +P I TY TL+ G     R++ A +++ EM+  G  P   T+N +++ +C  G   RA+
Sbjct: 257 IKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RAS 313

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +++  M   G +P+ V+YN LI G    G+L+ A +  D MV    +P   TY T+I+GL
Sbjct: 314 EVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGL 373

Query: 343 VKLGRAVDGARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
             +   ++ A +L+  + E+   ++   Y+ +I+G  + G A+ A  L  +MM  G KP 
Sbjct: 374 F-MENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPT 432

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
              Y++LI  LCR  K  EA+E+  +++  G   +    ++LM G   +G   +A  + K
Sbjct: 433 QFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLK 492

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           +M + N   ++V Y+ L+ GLC +GK  EAR +  +M  RG KPD ++Y+++I G    G
Sbjct: 493 EMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 552

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             + A  + +EML L     P + TYN LL  L K  +   + +LL  M   G  P+
Sbjct: 553 DTKHAFIVRDEMLSL--GFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPN 607



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 207/418 (49%), Gaps = 5/418 (1%)

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           + ++ +V A       +T+ F+ +++  C+L +VD AI+ F  M  +  +P   T   ++
Sbjct: 139 DLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHIL 198

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             L + NR++ A +   +M          TFN++IN LCK G+L +A   +  M   G  
Sbjct: 199 SLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIK 258

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P  VTYNTL+ G  L+G ++ A  ++  M +    P+  TY  I++ +   GRA   + V
Sbjct: 259 PTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRA---SEV 315

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L  M+      +   Y+ LI G    G  E A     +M+++G  P    Y+ LI GL  
Sbjct: 316 LREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 375

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
             K + AE ++ E+   G   ++ TY+ ++ G+ + G   KA  +  +M  +     +  
Sbjct: 376 ENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFT 435

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ LI+ LC   K REA  ++ +++ +G KPD+V  ++++ G C  G+++ A  L  EM 
Sbjct: 436 YTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMD 495

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            +     PD  TYN L+  LC +     + +L+  M  RG  PD ++ N  ++   +K
Sbjct: 496 RM--NIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 551



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 195/386 (50%), Gaps = 19/386 (4%)

Query: 111 REKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY 170
           +E ++   K F+ I +++G    ++  I  ++T+V  +  +  ++    +++ +  +G +
Sbjct: 238 KEGKLKKAKGFLGIMESFG----IKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG-F 292

Query: 171 HRALEFYNHIVN--------------AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
              L+ YN I++               K + ++P+++++N++I+     G ++ A     
Sbjct: 293 QPDLQTYNPILSWMCNEGRASEVLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRD 352

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM  +   P  YTY TL+ GL  EN+++ A +L+ E++  G     VT+N++ING C++G
Sbjct: 353 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHG 412

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +  +A  L D M   G  P + TY +LI+ LC +    +A  L +++V     P+ V   
Sbjct: 413 DAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMN 472

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+++G    G       +L  M+      ++  Y+ L+ GL  EGK E+A +L  +M  +
Sbjct: 473 TLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 532

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G KP+ + Y+ LI G  + G    A  +  EM++ G      TY++L+KG  ++  G  A
Sbjct: 533 GIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELA 592

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGL 482
            E+ ++M     V N+  +  +I  +
Sbjct: 593 EELLREMKSEGIVPNDSSFCSVIEAM 618



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 201/458 (43%), Gaps = 84/458 (18%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           +F+  +     K  V +FN ++NV+ +EG   +A  F   +   +   I P  +T+N ++
Sbjct: 212 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIM---ESFGIKPTIVTYNTLV 268

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           +     G ++ A  +  EM  +  +PD+ TY  ++  +C E R  E   +L EM+  G  
Sbjct: 269 QGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASE---VLREMKGIGLV 325

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP------------------------ 295
           P  V++N+LI G   NG+L  A    D M  +G +P                        
Sbjct: 326 PDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEIL 385

Query: 296 -----------NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
                      + VTYN +I+G C  G+  KA +L D M+     P + T          
Sbjct: 386 IREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFT---------- 435

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
                                    Y++LI  L +  K  +A +L+++++ KG KP+ V+
Sbjct: 436 -------------------------YTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVM 470

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
            + L+DG C  G  D A  +L EM       +  TY+ LM+G    GK  +A E+  +M 
Sbjct: 471 MNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMK 530

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +     + + Y+ LI G  + G  + A +V  +MLS G  P ++ Y++++ GL      E
Sbjct: 531 RRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGE 590

Query: 525 EALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSN 559
            A +L  EM     KS+   P+  ++  ++ A+ K  N
Sbjct: 591 LAEELLREM-----KSEGIVPNDSSFCSVIEAMSKSDN 623



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 108/231 (46%), Gaps = 5/231 (2%)

Query: 83  DSTFYSL-IQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           DS  Y++ I  Y   GD K    +   M  +     + ++  +     + +   EA  LF
Sbjct: 397 DSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELF 456

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             +V +   K  +   N++++     G   RA      +     MNI P+ +T+N +++ 
Sbjct: 457 EKVVGK-GMKPDLVMMNTLMDGHCATGNMDRAFSLLKEM---DRMNIDPDDVTYNCLMRG 512

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C  G  + A +L  EM  R  +PD  +Y TL+ G  K+     A ++ DEM   G  PT
Sbjct: 513 LCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPT 572

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
            +T+N L+ GL KN +   A +L+  M  +G +PN+ ++ ++I  +    N
Sbjct: 573 LLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKSDN 623


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 168/643 (26%), Positives = 292/643 (45%), Gaps = 109/643 (16%)

Query: 88  SLIQHYANSG-----DFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH-LVEEAIRLF 141
           S+++H A +G      F SL  ++ R      VV E     + KAY K   +++ A+ +F
Sbjct: 54  SVLKHLAVTGFSCTAIFTSLLRIISRFDSTNHVVFE----LLIKAYVKERKVLDAAVAVF 109

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEG------LYHRALEFYNHIVNAKHMNILPNTL-- 193
              +D+   K +  + NS+L  +++EG      L+ R        ++    NIL N+L  
Sbjct: 110 --FMDDCGFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCT 167

Query: 194 -----------------------TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
                                  T+N ++    + G    A+ +  +M   + + DIYTY
Sbjct: 168 NGEFRKAEDMLQKMKSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTY 227

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             ++D LC+  R   A LLL  M+ D   P   T+N LING    G++  A  + ++M  
Sbjct: 228 NIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLR 287

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK---LGR 347
           +  +P+  TY T+I G C    +DKA+S+L  M  +  MP+E+TY  ++NG  K   LG 
Sbjct: 288 QTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGP 347

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           A+D   +++ ++ R   +N+ + + LI G  + G+   A ++ K M+E G  P+ V YSA
Sbjct: 348 ALD---LMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSA 404

Query: 408 LIDGLCRVGKPDEAEEILFEM-----------------------------------INNG 432
           LI+G+CR+ K  E +EIL  M                                      G
Sbjct: 405 LINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRG 464

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
             AN   +++L++ F+  G   +A    + M++ N  +N V ++ +I   C  GK+ EA 
Sbjct: 465 LVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAF 524

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC-LEPKSQPDVFTYNILL 551
            V+  M+  G  P+V  Y +++ GLC  G + +A +    M C L+  S  D  T+N LL
Sbjct: 525 SVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQF---MFCLLDIPSAVDEKTFNALL 581

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
             +CK   +  ++D+   M+   C PD+ T  I L+                        
Sbjct: 582 LGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSG---------------------FC 620

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           ++ +      ++++ML+K + P T  +  ++  L    +++AA
Sbjct: 621 RKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAA 663



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 147/534 (27%), Positives = 249/534 (46%), Gaps = 59/534 (11%)

Query: 120  SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
            SF  I  +Y     + EA  ++  MV   H    V ++ ++L  + Q G          H
Sbjct: 506  SFNCIIDSYCHRGKIVEAFSVYDDMVRYGH-SPNVCTYQNLLRGLCQGG----------H 554

Query: 180  IVNAKHMNI----LPNTL---TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
            +V AK        +P+ +   TFN ++  +C+ G +D A+ +  +M   NC PDI+TY  
Sbjct: 555  LVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTI 614

Query: 233  LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA---------- 282
            L+ G C++ ++  A+++L  M   G  P  V +  L+NGL   G++  A+          
Sbjct: 615  LLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 674

Query: 283  --------------------------KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
                                      +++ +M+     PN  +YN L+HG   +G   K+
Sbjct: 675  GLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKS 734

Query: 317  VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
            + L   MV     P+ VTY  +I GL + G      + L  M       ++ ++  LI+ 
Sbjct: 735  LYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITS 794

Query: 377  LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
              ++ K  +A++L+  M      P++  +SA+I+GL R    D++ E+L EM+  G   N
Sbjct: 795  FSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPN 854

Query: 437  AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
               Y +L+      G+  +A  + ++M     V  EV  S +I GLC  GKL EA +V++
Sbjct: 855  HTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFS 914

Query: 497  QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM-LCLEPKSQPDVFTYNILLNALC 555
             M+  G  P V  +++++H LC    + +AL L   M LC   + + DV +YN+L+  LC
Sbjct: 915  NMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMELC---RLKVDVVSYNVLITGLC 971

Query: 556  KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            K  +IS ++DL   M  +G  P+ VT  I LT         Q+G + L ++  R
Sbjct: 972  KDKHISDALDLYGEMKSKGLWPN-VTTYITLTGAMYSTGRMQNGEELLEDIEER 1024



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 152/625 (24%), Positives = 270/625 (43%), Gaps = 78/625 (12%)

Query: 75  KLGSYQLGDSTFYSLIQH-YANSGDFKSLEMVLYRMRREK--------RVVLEKSFIFIF 125
           K+ S  L +S  Y+ I H Y   G FK+   VL  M R+          ++++K  +   
Sbjct: 180 KMKSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDK--LCRI 237

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           K   +A L+ + +R      DE        ++N+++N    EG  + A   +NH++    
Sbjct: 238 KRSARAFLLLKRMRKDDLTPDEC-------TYNTLINGFFGEGKINHARCVFNHML---R 287

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY--------------- 230
             ++P+  T+  +I   CR   +D A+ +  EM +    P   TY               
Sbjct: 288 QTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGP 347

Query: 231 -------------------CT-LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
                              CT L+DG C+   + +A  +L  M  DG  P  VT++ LIN
Sbjct: 348 ALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALIN 407

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           G+C+  ++    +++  M   G LPN+V Y TLI   C  G +  A+     +     + 
Sbjct: 408 GMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVA 467

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N V +  ++    + G   +       M       N   ++ +I      GK  +A  ++
Sbjct: 468 NPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVY 527

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M+  G  PN   Y  L+ GLC+ G   +A++ +F +++   A +  T+++L+ G  + 
Sbjct: 528 DDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKY 587

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G   +A++I + M KNNC+ +   Y++L+ G C  GK+  A ++   ML +G  PD VAY
Sbjct: 588 GTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAY 647

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + +++GL N G V+ A  +F E++C E     D   YN L+N   K  N++    +++ M
Sbjct: 648 TCLLNGLINEGQVKAASYVFQEIICKEG-LYADCIAYNSLMNGYLKGGNVNTIKRMMSDM 706

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
                 P+  + NI +                         KR + S    + + M++K 
Sbjct: 707 YQNEVYPNSASYNILMHG---------------------YVKRGQFSKSLYLYKYMVRKG 745

Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
           + P   T+  ++  L     I  A+
Sbjct: 746 IRPDNVTYRLLILGLSECGLIDIAV 770



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 135/549 (24%), Positives = 260/549 (47%), Gaps = 31/549 (5%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            T+ +L++     G     +  ++ +      V EK+F  +     K   ++EA+ +   M
Sbjct: 541  TYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKM 600

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            V   +C   + ++  +L+   ++G    AL     ++      ++P+T+ +  ++  +  
Sbjct: 601  VKN-NCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEK---GVVPDTVAYTCLLNGLIN 656

Query: 205  LGLVDNAIQLFREMPVRNCEPDIYTYC----TLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             G V  A  +F+E+    C+  +Y  C    +LM+G  K   ++    ++ +M  +  +P
Sbjct: 657  EGQVKAASYVFQEII---CKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYP 713

Query: 261  TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
               ++N+L++G  K G+  ++  L   M  KG  P+ VTY  LI GL   G +D AV  L
Sbjct: 714  NSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFL 773

Query: 321  DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            ++MV     P+++ +  +I    +  +  +  R+   M+      +   +S +I+GL ++
Sbjct: 774  EKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAMINGLIRK 833

Query: 381  GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
               + + ++  +M++ G +PN   Y AL++  CRVG+ D A  +  EM   G        
Sbjct: 834  NYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAE 893

Query: 441  SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
            SS+++G    GK  +AV ++ +M ++  V     ++ L+H LC++ K+ +A  +   M  
Sbjct: 894  SSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALHLKRLMEL 953

Query: 501  RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQ 557
               K DVV+Y+ +I GLC    + +AL L+ EM     KS+   P+V TY  L  A+   
Sbjct: 954  CRLKVDVVSYNVLITGLCKDKHISDALDLYGEM-----KSKGLWPNVTTYITLTGAMYST 1008

Query: 558  SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
              + +  +LL  + +RG  P        L  L+ ++E   D    LN     + +R R  
Sbjct: 1009 GRMQNGEELLEDIEERGLIPAFKQ----LENLERRME---DAIRRLN-----MIRRCRKE 1056

Query: 618  GGFKIVEVM 626
              F+ VE++
Sbjct: 1057 VTFRGVELL 1065



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/567 (21%), Positives = 237/567 (41%), Gaps = 73/567 (12%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+++ +++V+     R    +   + ++IQ  ++ +A+    H+     +     T  F 
Sbjct: 16  ALKILNSIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLA----VTGFSCTAIFT 71

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +++ + R    ++ +                 +  L+    KE ++ +A + +  M   
Sbjct: 72  SLLRIISRFDSTNHVV-----------------FELLIKAYVKERKVLDAAVAVFFMDDC 114

Query: 257 GCFPTPVTFNV-----------------------------------LINGLCKNGELGRA 281
           G   +PV  N                                    L+N LC NGE  +A
Sbjct: 115 GFKASPVACNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKA 174

Query: 282 AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
             ++  M    CL N  TYNT++H    KG    A+ +L+ M       +  TY  +I+ 
Sbjct: 175 EDMLQKM-KSCCLSNSATYNTILHWYVKKGRFKAALCVLEDMERDSIQADIYTYNIMIDK 233

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L ++ R+     +L  M +     +E  Y+TLI+G F EGK   A  ++  M+ +   P+
Sbjct: 234 LCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHARCVFNHMLRQTLVPS 293

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
              Y+ +IDG CR  + D+A  +L EM   G   +  TYS+L+ G+ +      A+++  
Sbjct: 294 VATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNGYCKVSMLGPALDLMV 353

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           D+       N+   ++LI G C+ G++ +A+ +   ML  G  PDVV YS++I+G+C   
Sbjct: 354 DLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMA 413

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            + E  ++ + M   +    P+   Y  L+   CK   +  ++     +  RG   + V 
Sbjct: 414 KMHETKEILSRM--QKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVI 471

Query: 582 CNIFLTALKEK--LEAPQDGTDFLNELAIRL------------FKRQRTSGGFKIVEVML 627
            N  L A   +  +   +    +++ + I                R +    F + + M+
Sbjct: 472 HNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMV 531

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAA 654
           +   SP   T++ +++ LC+   +  A
Sbjct: 532 RYGHSPNVCTYQNLLRGLCQGGHLVQA 558



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/323 (21%), Positives = 129/323 (39%), Gaps = 44/323 (13%)

Query: 353 RVLMSMEERK-FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG--CKP--------- 400
           ++L S+ ER       YIY   +  L +      AM + K +   G  C           
Sbjct: 18  KILNSIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLRII 77

Query: 401 ------NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
                 N VV+  LI    +  K  +A   +F M + G  A+    +S++K   E G+  
Sbjct: 78  SRFDSTNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVACNSILKALVEEGESK 137

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
                 ++        +    ++L++ LC +G+ R+A  +  +M S  C  +   Y++++
Sbjct: 138 YVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKS-CCLSNSATYNTIL 196

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           H     G  + AL +  +M   E  S Q D++TYNI+++ LC+    + +  LL  M   
Sbjct: 197 HWYVKKGRFKAALCVLEDM---ERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKD 253

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
              PD  T N  +                        F   + +    +   ML++ L P
Sbjct: 254 DLTPDECTYNTLINGF---------------------FGEGKINHARCVFNHMLRQTLVP 292

Query: 634 QTSTWERVVQELCRPKRIQAAIN 656
             +T+  ++   CR +RI  A++
Sbjct: 293 SVATYTTMIDGYCRNRRIDKALS 315


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 216/404 (53%), Gaps = 2/404 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP+ + F+ ++  + +L   +  I LFR + +     D+Y++ TL+D  C+ +RL  A+ 
Sbjct: 70  LPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALS 129

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
            L +M   G  P+ VTF  L+NG C    +  A  LVD +   G  PN V YNT+I  LC
Sbjct: 130 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 189

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
               +D A+ +L+ M      P+ +TY ++I  L   G+    AR+L  M     H +  
Sbjct: 190 ENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVI 249

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            +S +I    KEG+  +A K + +M+++   PN V Y++LI+GLC  G  DEA+++L  M
Sbjct: 250 TFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFM 309

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ G   NA TY++L+ G+ +S +   A++I   M+ +    +   Y+ L  G C+ G+ 
Sbjct: 310 VSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQF 369

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  V  +M+S G  PD+  ++ ++ GLC  G +E+AL    ++   + ++   + TYN
Sbjct: 370 NAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDL--QKSETVVGIITYN 427

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           I++  +CK + +  +  L  S+  +G  PD++T    +  L+ K
Sbjct: 428 IIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRK 471



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 188/344 (54%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +TF  ++   C +  +  A+ L  ++     EP++  Y T++D LC+  ++D A+ +
Sbjct: 141 PSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDV 200

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+ M+  G  P  +T+N LI  L  +G+ G +A+++ +M   G  P+ +T++ +I     
Sbjct: 201 LNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGK 260

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G L +A    D M+     PN VTY ++INGL   G   +  +VL  M  + F  N   
Sbjct: 261 EGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVT 320

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TL++G  K  + +DAMK+   M   G   +T  Y+ L  G C+ G+ + AE++L  M+
Sbjct: 321 YNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMV 380

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   + +T++ L+ G  E GK  KA+   +D+ K+  V   + Y+++I G+C+  K+ 
Sbjct: 381 SCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVE 440

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +A  ++  +  +G  PDV+ Y++M+ GL       EA +L+ +M
Sbjct: 441 DAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKM 484



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 179/352 (50%), Gaps = 6/352 (1%)

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           + ++A+ L  +M      P+ V F+ L+  + K  +      L  ++ + G   +  +++
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           TLI   C    L  A+S L +M+     P+ VT+G+++NG   + R  +   ++  +   
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
            +  N  IY+T+I  L +  + + A+ +   M + G +P+ + Y++LI  L   GK   +
Sbjct: 173 GYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVS 232

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             IL +M+  G   +  T+S+++  F + G+  +A + + +M + +   N V Y+ LI+G
Sbjct: 233 ARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLING 292

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS- 540
           LC  G L EA+ V   M+S+G  P+ V Y+++++G C +  V++A+K+    LC+     
Sbjct: 293 LCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKI----LCVMSHDG 348

Query: 541 -QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
              D FTYN L    C+    + +  +L  M+  G  PD+ T N+ L  L E
Sbjct: 349 VDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCE 400



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 166/334 (49%), Gaps = 4/334 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA+ L   +V   + +  V  +N++++ + +      AL+  NH+   + M I P+ +
Sbjct: 159 IQEAMSLVDQIVGLGY-EPNVVIYNTIIDSLCENRQVDTALDVLNHM---EKMGIRPDVI 214

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +I  +   G    + ++  +M      PD+ T+  ++D   KE +L EA    DEM
Sbjct: 215 TYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEM 274

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  VT+N LINGLC +G L  A K+++ M  KG  PN VTYNTL++G C    +
Sbjct: 275 IQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRV 334

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A+ +L  M       +  TY T+  G  + G+     +VL  M       + Y ++ L
Sbjct: 335 DDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNML 394

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GL + GK E A+   + + +       + Y+ +I G+C+  K ++A  +   +   G 
Sbjct: 395 LDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGV 454

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           + +  TY+++M G        +A E+++ M K++
Sbjct: 455 SPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDD 488


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 176/659 (26%), Positives = 290/659 (44%), Gaps = 99/659 (15%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFK 126
           E      KLG ++L   ++ SL+  Y + GD +  + VL +   EK V+  K +   + K
Sbjct: 87  EFVREMEKLG-FELNAVSYNSLVDGYVSLGDIEGAKGVL-KFMSEKGVMRNKVTLTLLIK 144

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
            Y K   VEEA ++   M  E        ++ ++++   + G    A+   + ++    +
Sbjct: 145 GYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEML---KV 201

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            +  N    N +I   C+ G V    +L   M   + +PD Y+YCTL+DG C++    +A
Sbjct: 202 GLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKA 261

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY------ 300
             + D+M   G  PT VT+N L+ GLC+ G+   A +L   M  +G  PNEV Y      
Sbjct: 262 FNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDG 321

Query: 301 -----------------------------NTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
                                        NT+I+GLC  G +D A     RM    C P+
Sbjct: 322 LFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPD 381

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            +TY T+ +G  K+G   +  ++   ME+ +   +  +Y++LI GLF   K    + L  
Sbjct: 382 GITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLA 441

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M  +G  PN V Y ALI G C  G+ D+A    FEMI  G A N    S ++   +  G
Sbjct: 442 EMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLG 501

Query: 452 K------------------GHKAVEIWK--DMAKNNC---------------VYNEVCYS 476
           +                   H+ +E ++  D+ K +C               + N V Y+
Sbjct: 502 RIDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYN 561

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           + + GLC+ GK+ +AR  +  +      PD   Y ++IHG   AG V EA  L +EM  +
Sbjct: 562 IAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEM--V 619

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                P++ TYN LLN LCK   +  +  L + +  +G  P++VT NI +     K  +P
Sbjct: 620 NKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYC-KSGSP 678

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           ++  D   +                    ML++ +SP   T+  ++   C+   ++ A+
Sbjct: 679 REALDLRGK--------------------MLKEGISPSIITYSSLINGFCKQSDVEEAM 717



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 138/450 (30%), Positives = 233/450 (51%), Gaps = 12/450 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++A+RL+H M+        V  + ++L+ + + G + RAL  ++ I+ A+ +N   +   
Sbjct: 294 KDALRLWHLMLQRGVTPNEV-GYCTLLDGLFKMGDFSRALTLWDDIL-ARGIN--KSIYA 349

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           FN +I  +C++G +D A + F+ M    C+PD  TY TL DG CK   ++EA  + ++M+
Sbjct: 350 FNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKME 409

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            +  FP+   +N LI GL  + ++ +   L+  M  +G  PN VTY  LI G C +G LD
Sbjct: 410 KEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLD 469

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA S    M+     PN +    I++ L +LGR  +   +L  M +    ++        
Sbjct: 470 KAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLVLDHRCLEDFQ 529

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCK---PNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           +   ++    D  K+   + E   K   PN VVY+  + GLC+ GK ++A      + + 
Sbjct: 530 NADIRK---LDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHG 586

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
               + FTY +L+ GF  +G  ++A  +  +M     V N   Y+ L++GLC+ G L  A
Sbjct: 587 SFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRA 646

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
           R ++ ++  +G  P+VV Y+ +I G C +GS  EAL L  +ML  +    P + TY+ L+
Sbjct: 647 RRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKML--KEGISPSIITYSSLI 704

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           N  CKQS++  ++ LLN M     D  + T
Sbjct: 705 NGFCKQSDVEEAMKLLNEMKASNVDQTIAT 734



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 133/475 (28%), Positives = 224/475 (47%), Gaps = 17/475 (3%)

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           +++K     G+V NA+ +F  M     +P + +  +L+  L K      AVL+ D+M+  
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P   T  +++N  CK G++ RA + V  M   G   N V+YN+L+ G    G+++ A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME-ERKFHVNEYIYSTLIS 375
             +L  M     M N+VT   +I G  K  +  +  +VL  ME E    V+EY Y  LI 
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G  K GK  DA+++  +M++ G K N  V ++LI+G C+ G+  E E +L  M       
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           ++++Y +L+ G+   G   KA  +   M +       V Y+ L+ GLC  G  ++A  +W
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             ML RG  P+ V Y +++ GL   G    AL L++++L         ++ +N ++N LC
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILA--RGINKSIYAFNTMINGLC 358

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVT--------CNI------FLTALKEKLEAPQDGTD 601
           K   +  + +    M + GC PD +T        C +      F    K + E      +
Sbjct: 359 KMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIE 418

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             N L + LF  ++ S    ++  M  + LSP   T+  ++   C   R+  A +
Sbjct: 419 MYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFS 473



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 170/642 (26%), Positives = 275/642 (42%), Gaps = 106/642 (16%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SL+ +    G+  S  +V  +MRR   V    +   +  AY KA  VE A+     M ++
Sbjct: 36  SLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFVREM-EK 94

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRA---LEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
              +    S+NS+++  +  G    A   L+F +         ++ N +T  L+IK  C+
Sbjct: 95  LGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSE------KGVMRNKVTLTLLIKGYCK 148

Query: 205 LGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
              V+ A ++ REM   +    D Y Y  L+DG CK  ++ +A+ + DEM   G      
Sbjct: 149 QCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLF 208

Query: 264 TFNVLINGLCKNGELGRAAKLV-----------------------------------DNM 288
             N LING CKNG++    +L+                                   D M
Sbjct: 209 VCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQM 268

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             KG  P  VTYNTL+ GLC  G+   A+ L   M+     PNEV Y T+++GL K+G  
Sbjct: 269 LRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMG-- 326

Query: 349 VDGARVLMSMEE---RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
            D +R L   ++   R  + + Y ++T+I+GL K G+ + A + +K+M E GCKP+ + Y
Sbjct: 327 -DFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITY 385

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
             L DG C+VG  +EA +I  +M       +   Y+SL+ G F S K  K +++  +M  
Sbjct: 386 RTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDT 445

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                N V Y  LI G C+ G+L +A   + +M+ +G  P+V+  S ++  L   G ++E
Sbjct: 446 RGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDE 505

Query: 526 ALKLFNEML---------CLEPKSQPDV------------------------FTYNILLN 552
           A  L  +M+         CLE     D+                          YNI + 
Sbjct: 506 ANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMA 565

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
            LCK   ++ +      +      PD  T    +               ++NE       
Sbjct: 566 GLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFS--------AAGYVNE------- 610

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  F + + M+ K L P  +T+  ++  LC+   +  A
Sbjct: 611 ------AFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRA 646



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/210 (35%), Positives = 112/210 (53%), Gaps = 1/210 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LPN + +N+ +  +C+ G V++A + F  +   +  PD +TYCTL+ G      ++EA  
Sbjct: 554 LPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFN 613

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L DEM   G  P   T+N L+NGLCK+G L RA +L D + LKG +PN VTYN LI G C
Sbjct: 614 LRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYC 673

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G+  +A+ L  +M+     P+ +TY ++ING  K     +  ++L  M+         
Sbjct: 674 KSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIA 733

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
            +S L+ G  + G  +   KL   MM   C
Sbjct: 734 TFSKLVEGCIQHGDVKKMSKL-HNMMHMAC 762



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 95/181 (52%), Gaps = 7/181 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   +  A  V EA  L   MV++      + ++N++LN + + G   RA   ++ 
Sbjct: 594 TYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVP-NITTYNALLNGLCKSGYLDRARRLFDK 652

Query: 180 IVNAKHM-NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
           +    H+  ++PN +T+N++I   C+ G    A+ L  +M      P I TY +L++G C
Sbjct: 653 L----HLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFC 708

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K++ ++EA+ LL+EM+      T  TF+ L+ G  ++G++ + +KL  NM    C    +
Sbjct: 709 KQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKL-HNMMHMACPSAGI 767

Query: 299 T 299
           T
Sbjct: 768 T 768


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 227/456 (49%), Gaps = 25/456 (5%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           AY K          F    D +  K +V S N +++ +++ G        Y  ++  +  
Sbjct: 102 AYAKNLRTRLGFEAFKRASD-YGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRR-- 158

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE- 245
            I P  ++FN+VI  +C++G ++ A  +  +M VR    ++ TY TL+DG CK  ++ + 
Sbjct: 159 -IEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKM 217

Query: 246 --AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
             A  +L EM+ DG  P  VTFN+LI+G CK+  +  A K+   M  +G  PN VTYN+L
Sbjct: 218 YKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSL 277

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I+GLC  G +++A +L D+MV S   PN +T+  ++NG  K         +   M ++  
Sbjct: 278 INGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGI 337

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   Y+ LI    K+   EDA  L++ M+ KG  P+   Y+ LI GLCR G  + A  
Sbjct: 338 TPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARN 397

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++ EM      A+  TY+ L+      G+  KA+ +  +M +     +++ Y+ +I G C
Sbjct: 398 LVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYC 457

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           ++G LR A  + +QM   G   +V  Y+ +I G C    +E+A  L NEM  LE    P+
Sbjct: 458 KEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEM--LEKGLIPN 515

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
             TY I                +   MM++G  PD+
Sbjct: 516 RMTYEI----------------VTEEMMEKGFVPDI 535



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 209/404 (51%), Gaps = 5/404 (1%)

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N ++  + ++G + +   +++EM  R  EP + ++  +++GLCK  +L++A  ++++M+V
Sbjct: 132 NPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKV 191

Query: 256 DGCFPTPVTFNVLINGLCKNGELGR---AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
            G     +T+N LI+G CK G++G+   A  ++  M   G  PNEVT+N LI G C   N
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKN 251

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +  A+ +   M      PN VTY ++INGL   G+  +   +   M       N   ++ 
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNA 311

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L++G  K    + A +L+  M ++G  PN   Y+ LID  C+    ++A  +   M+  G
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 371

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              +  TY+ L+ G    G    A  +  +M   +   + + Y++LI  LC  G++++A 
Sbjct: 372 VCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKAL 431

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M  +G KP  + Y++MI G C  G++  AL L ++M   +     +V TYN+L+ 
Sbjct: 432 RLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQME--KVGRLANVATYNVLIK 489

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
             CK+  +  +  LLN M+++G  P+ +T  I    + EK   P
Sbjct: 490 GFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVP 533



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 206/397 (51%), Gaps = 19/397 (4%)

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N L++GL K GE+G    +   M  +   P  +++N +I+GLC  G L+KA  +++ M  
Sbjct: 132 NPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKV 191

Query: 326 SKCMPNEVTYGTIING---LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
                N +TY T+I+G   + K+G+      +L  M       NE  ++ LI G  K+  
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKN 251

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              AMK++ +M  +G KPN V Y++LI+GLC  GK +EA  +  +M+N+    N  T+++
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNA 311

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ GF ++    +A E++ DM K     N   Y++LI   C+D  + +A  ++  ML +G
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 371

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             PDV  Y+ +I GLC  G +E A  L +EM     K+  D+ TYNIL+++LC +  +  
Sbjct: 372 VCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKA--DLITYNILIDSLCNKGEMKK 429

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL-KE-------KLEAPQDGTDFLNELA-----IR 609
           ++ LL+ M  +G  P  +T N  +    KE        L +  +    L  +A     I+
Sbjct: 430 ALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIK 489

Query: 610 LF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
            F K+ +      ++  ML+K L P   T+E V +E+
Sbjct: 490 GFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEM 526



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 171/347 (49%), Gaps = 7/347 (2%)

Query: 85  TFYSLIQHYANSGDFKSL---EMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI  Y   G    +   + +L  MR +     E +F  +   + K   V  A+++F
Sbjct: 200 TYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVF 259

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M +    K  V ++NS++N +   G  + A    + +VN+    + PN +T N ++  
Sbjct: 260 AEM-NRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNS---CLKPNIITHNALLNG 315

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+  +V  A +LF +MP +   P++ TY  L+D  CK+  +++A  L   M   G  P 
Sbjct: 316 FCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPD 375

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             T+N LI GLC+ G+L  A  LV  M  K    + +TYN LI  LC KG + KA+ LLD
Sbjct: 376 VSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLD 435

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M      P+++TY T+I+G  K G       +   ME+     N   Y+ LI G  K+ 
Sbjct: 436 EMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKD 495

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           K EDA  L  +M+EKG  PN + Y  + + +   G   + E  L+++
Sbjct: 496 KLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKV 542



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 176/360 (48%), Gaps = 28/360 (7%)

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N L+ GL   G +     +   M+  +  P  +++  +INGL K+G+      ++  M+ 
Sbjct: 132 NPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKV 191

Query: 361 RKFHVNEYIYSTLISG---LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           R    N   Y+TLI G   + K GK   A  + K+M   G  PN V ++ LIDG C+   
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKN 251

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY-NEVCYS 476
              A ++  EM   G   N  TY+SL+ G   +GK ++A  + +D   N+C+  N + ++
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL-RDQMVNSCLKPNIITHN 310

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            L++G C++  +++A  ++  M  +G  P+V  Y+ +I   C   ++E+A  L+  ML  
Sbjct: 311 ALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIML-- 368

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                PDV TYN L+  LC++ ++  + +L++ M  +    DL+T NI + +L  K E  
Sbjct: 369 GKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMK 428

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           +         A+RL             + M +K L P   T+  ++   C+   ++AA+N
Sbjct: 429 K---------ALRLL------------DEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALN 467



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 151/345 (43%), Gaps = 65/345 (18%)

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            ++L+S+    F  N  I   L+    K  +     + +K+  + G K +    + L+ G
Sbjct: 78  TQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSG 137

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L +VG+  + E +  EMI         +++ ++ G  + GK +KA +I +DM       N
Sbjct: 138 LVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSAN 197

Query: 472 EVCYSVLIHGLCEDGK----------LREARM---------------------------- 493
            + Y+ LI G C+ GK          L+E R                             
Sbjct: 198 VITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMK 257

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKSQPDVFTYNILL 551
           V+ +M  +G KP+VV Y+S+I+GLCN G V EA  L ++M+  CL    +P++ T+N LL
Sbjct: 258 VFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCL----KPNIITHNALL 313

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           N  CK   +  + +L + M  +G  P++ T NI + A                       
Sbjct: 314 NGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDA---------------------YC 352

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           K +     F +  +ML K + P  ST+  ++  LCR   ++AA N
Sbjct: 353 KDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARN 397



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/238 (21%), Positives = 101/238 (42%), Gaps = 26/238 (10%)

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           E  +IL  +  +   AN+     L+  + ++ +     E +K  +      +    + L+
Sbjct: 76  EQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLM 135

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GL + G++ +   V+ +M+ R  +P +++++ +I+GLC  G + +A  +  +M      
Sbjct: 136 SGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVS 195

Query: 540 SQPDVFTYNILLNALCKQSNIS---HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
           +  +V TYN L++  CK   I     +  +L  M   G  P+ VT NI +          
Sbjct: 196 A--NVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILI---------- 243

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            DG            K +  S   K+   M ++ + P   T+  ++  LC   ++  A
Sbjct: 244 -DG----------FCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEA 290


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/503 (28%), Positives = 243/503 (48%), Gaps = 52/503 (10%)

Query: 196 NLVIKTVCRLGLVDNAIQ-LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-LLLDEM 253
           N  +K +C     D A+  L   M    C PD ++Y T++  LC  +R  EA+ +LL   
Sbjct: 204 NTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMT 263

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           + DGC P  V++ ++I+GL   GE+ +A  L + M  KG +PN VTYN+++H LC    +
Sbjct: 264 KGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAM 323

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           DKA  +L +M  +   P+EVTY  +I+G   LGR  + A++   M       +   +++L
Sbjct: 324 DKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSL 383

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L K  ++++A +++  +  KG KP+ + YS L+ G    G+  +   +   M +NG 
Sbjct: 384 MDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGI 443

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
            A++  ++ L+    + G   +A+ I+ +M       N V Y+ +I  LC  G+L +A  
Sbjct: 444 VADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAME 503

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM-------------------L 534
             +QM+S G KP+ V Y S+I G C  G + +A +L +EM                   L
Sbjct: 504 KLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSL 563

Query: 535 CLEPK---------------SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           C E +                +PD+FT+N L++  C    +  +  +L++M+  G +PD+
Sbjct: 564 CNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDV 623

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVE 624
           VT +  +     K     DG     E+  +               LF+  RTS   K+  
Sbjct: 624 VTYSTLINGYF-KSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFH 682

Query: 625 VMLQKFLSPQTSTWERVVQELCR 647
            M++   +   ST+  ++Q LCR
Sbjct: 683 EMIESGTAMSISTYTIILQGLCR 705



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 272/577 (47%), Gaps = 21/577 (3%)

Query: 93  YANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKR 152
           YA   D ++L M+L+RM     V    S+  + K+       +EA+ +   M     C  
Sbjct: 212 YAKRTD-EALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSP 270

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
            V S+  V++ +  EG   +A   +N +V      ++PN +T+N ++  +C+   +D A 
Sbjct: 271 DVVSYTMVIHGLFMEGEISKACNLFNEMVQK---GVVPNVVTYNSIVHALCKARAMDKAE 327

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            + R+M   + +PD  TY  ++ G     R  EA  +  EM  +G  P  VTFN L++ L
Sbjct: 328 LVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSL 387

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK+     AA++  ++  KG  P+ ++Y+ L+HG   +G      +L   M  +  + + 
Sbjct: 388 CKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADS 447

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             +  +IN   K G   +   +   M  +    N   Y+T+I+ L + G+  DAM+   Q
Sbjct: 448 HCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQ 507

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT-YSSLMKGFFESG 451
           M+  G KPNTVVY +LI G C  G   +A+E++ EM++ G      T +SS++      G
Sbjct: 508 MISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEG 567

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +   A +++  +       +   ++ LI G C  GK+ +A  V   M+S G +PDVV YS
Sbjct: 568 RVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYS 627

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           ++I+G   +G +++ L LF EMLC   + +P   TY+++L+ L +    S +  + + M+
Sbjct: 628 TLINGYFKSGRIDDGLILFREMLC--KRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMI 685

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDF--------------LNELAIRLFKRQRTS 617
           + G    + T  I L  L       +  T F              LN +   L+K +R  
Sbjct: 686 ESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRRE 745

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               +   +    L P  ST+  ++  L +   ++ A
Sbjct: 746 EAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEA 782



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 236/457 (51%), Gaps = 5/457 (1%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
           S Q  + T+ ++I  Y+  G +K    +   M RE  +    +F  +  +  K    +EA
Sbjct: 337 SIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEA 396

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
             +FH++  + H K  + S++ +L+    EG   R ++  N   +     I+ ++  FN+
Sbjct: 397 AEIFHSIATKGH-KPDIISYSILLHGYATEG---RFVDMNNLFHSMTDNGIVADSHCFNI 452

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I    + G++D A+ +F EM  +   P++ TY T++  LC+  RL +A+  L +M   G
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-LPNEVTYNTLIHGLCLKGNLDKA 316
             P  V ++ LI G C +G+L +A +LV  M  +G   PN   ++++IH LC +G +  A
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNA 572

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             + + ++     P+  T+ ++I+G   +G+      VL +M       +   YSTLI+G
Sbjct: 573 QDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLING 632

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
            FK G+ +D + L+++M+ K  KP TV YS ++DGL R G+   A+++  EMI +G A +
Sbjct: 633 YFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMS 692

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY+ +++G   +    +A+ ++  +   N  +     + +IH L +  +  EA  ++ 
Sbjct: 693 ISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFA 752

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            + + G  P+   Y  MI  L   GSVEEA  +F+ M
Sbjct: 753 SVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSM 789



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 140/521 (26%), Positives = 240/521 (46%), Gaps = 57/521 (10%)

Query: 188 ILPNTL-TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           ++P T+ T+ +++   CR    D     F  +       D     T +  LC   R DEA
Sbjct: 160 VVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEA 219

Query: 247 V-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL-KGCLPNEVTYNTLI 304
           + +LL  M   GC P   ++N +I  LC       A  ++  M    GC P+ V+Y  +I
Sbjct: 220 LSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVI 279

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEERKF 363
           HGL ++G + KA +L + MV    +PN VTY +I++ L K  RA+D A  VL  M +   
Sbjct: 280 HGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCK-ARAMDKAELVLRQMFDNSI 338

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +E  Y+ +I G    G+ ++A K++K+M  +G  P+ V +++L+D LC+  +  EA E
Sbjct: 339 QPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAE 398

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           I   +   G   +  +YS L+ G+   G+      ++  M  N  V +  C+++LI+   
Sbjct: 399 IFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHA 458

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G + EA +++T+M  +G  P+VV Y+++I  LC  G + +A++  ++M+ +  K  P+
Sbjct: 459 KRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLK--PN 516

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRG----------------CD----------- 576
              Y+ L+   C   ++  + +L++ MMD+G                C+           
Sbjct: 517 TVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVF 576

Query: 577 ---------PDLVTCNIFLTA--LKEKLEAPQDGTDFL------------NELAIRLFKR 613
                    PD+ T N  +    L  K++      D +            + L    FK 
Sbjct: 577 NLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKS 636

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            R   G  +   ML K + P T T+  V+  L R  R  AA
Sbjct: 637 GRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAA 677



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 110/465 (23%), Positives = 215/465 (46%), Gaps = 8/465 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQH-YANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK 126
           EIF+S    G     D   YS++ H YA  G F  +  + + M     V     F  +  
Sbjct: 398 EIFHSIATKGHKP--DIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILIN 455

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           A+ K  +++EA+ +F  M  +      V ++ +V+  + + G    A+E  + +++   +
Sbjct: 456 AHAKRGMMDEALLIFTEMRGQ-GVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS---I 511

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDE 245
            + PNT+ ++ +I+  C  G +  A +L  EM  +    P+I  + +++  LC E R+  
Sbjct: 512 GLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMN 571

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  + + +   G  P   TFN LI+G C  G++ +A  ++D M   G  P+ VTY+TLI+
Sbjct: 572 AQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLIN 631

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G    G +D  + L   M+  +  P  VTY  +++GL + GR     ++   M E    +
Sbjct: 632 GYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAM 691

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   Y+ ++ GL +    ++A+ L+ ++     K    + + +I  L +V + +EA ++ 
Sbjct: 692 SISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLF 751

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             +  +G   NA TY  ++    + G   +A  ++  M K  C  +    + +I  L + 
Sbjct: 752 ASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQK 811

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           G++ +A    +++       +    S +I    + G   E +K  
Sbjct: 812 GEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFL 856



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 174/394 (44%), Gaps = 39/394 (9%)

Query: 301 NTLIHGLCLKGNLDK----------------AVSLLDRMVASKCMPNEV-----TYGTII 339
           +T +HG  L G L                  AV+L +R+   +  P  V     TYG ++
Sbjct: 113 DTPVHGRALNGFLAALARARDSVACSDAPALAVALFNRICREEAGPRVVPLTVHTYGILM 172

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK-LWKQMMEKGC 398
           +   +  R   G      +       +  + +T +  L    + ++A+  L  +M E GC
Sbjct: 173 DCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGC 232

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMI-NNGCAANAFTYSSLMKGFFESGKGHKAV 457
            P+   Y+ +I  LC   +  EA ++L  M   +GC+ +  +Y+ ++ G F  G+  KA 
Sbjct: 233 VPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKAC 292

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            ++ +M +   V N V Y+ ++H LC+   + +A +V  QM     +PD V Y++MIHG 
Sbjct: 293 NLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGY 352

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
              G  +EA K+F EM        PD+ T+N L+++LCK      + ++ +S+  +G  P
Sbjct: 353 SCLGRWKEAAKMFKEMT--REGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKP 410

Query: 578 DLVTCNIFLTALKEK---------LEAPQDG-----TDFLNELAIRLFKRQRTSGGFKIV 623
           D+++ +I L     +           +  D      +   N L     KR        I 
Sbjct: 411 DIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIF 470

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
             M  + +SP   T+  V+  LCR  R+  A+ K
Sbjct: 471 TEMRGQGVSPNVVTYATVIAALCRMGRLADAMEK 504


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 155/559 (27%), Positives = 254/559 (45%), Gaps = 12/559 (2%)

Query: 35  SHRFFS--VRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSL-IQ 91
           +H  F   +R   +S   + +     A+     +  +FN  P+       D   YS+ I 
Sbjct: 51  AHHLFDELLRRDTTSIFDLNSALSAVARESPAVALSLFNRMPR------ADLCTYSIVIG 104

Query: 92  HYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK 151
             + +G        L R+ R        +F  + K         +A+ +    +    C 
Sbjct: 105 CCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCT 164

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEF-YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
               S+N +L  +  E    +AL   +  + +       P+ +++  VI  + R G +D 
Sbjct: 165 PNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDK 224

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A  LF EM  +   P+  TY  L+ G C   +  EA+ +  +M  DG  P  VT+N L+ 
Sbjct: 225 AYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMV 284

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            LCKNG    A K+ D+M  KG  P+   Y TL+HG   +G L +   LLD MV +   P
Sbjct: 285 YLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQP 344

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           +   +  +I    K G   +       M ++  H N   Y T++  L + GK +DAM  +
Sbjct: 345 DHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQF 404

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            +++ +G  PN VV+  LI GLC   K D+AEE+  EMI  G   N   +++L+    + 
Sbjct: 405 DRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKE 464

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G   +A  I+  M + +   + + Y+ LI G C DGK+ EA  +   M+  G KP+ V Y
Sbjct: 465 GMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTY 524

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++I+G C  G +E+A  LF +M        P +  Y+ +L+ L +   I+ + +L   M
Sbjct: 525 NTIINGYCKNGRIEDACSLFRQM--ASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWM 582

Query: 571 MDRGCDPDLVTCNIFLTAL 589
           +  G    + T NI L  L
Sbjct: 583 IKCGIKLPIGTYNIILQGL 601



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 143/511 (27%), Positives = 249/511 (48%), Gaps = 43/511 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDE---FHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
           S+  + K     +  ++A+ L HTM+ +     C   V S+ +V+N +++EG   +A   
Sbjct: 169 SYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCL 228

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           ++ +++     + PN +T+N ++   C  G    AI +FR+M     EPD+ TY TLM  
Sbjct: 229 FDEMLD---QGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVY 285

Query: 237 LCKENRLDEAV-----------------------------------LLLDEMQVDGCFPT 261
           LCK  R  EA                                     LLD M  +G  P 
Sbjct: 286 LCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPD 345

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
              FN+LI    K+G +  A      M  +G  PN VTY T++  LC  G +D A+S  D
Sbjct: 346 HYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFD 405

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           R+++    PN V + T+I+GL    +      + + M  R    N   ++TL++ L KEG
Sbjct: 406 RLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEG 465

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
               A  ++  M+    + + + Y+ LIDG C  GK DEA ++L  M+ +G   N  TY+
Sbjct: 466 MVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYN 525

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +++ G+ ++G+   A  +++ MA        V YS ++HGL +  ++  A+ ++  M+  
Sbjct: 526 TIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKC 585

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G K  +  Y+ ++ GLC     ++AL++F+ +  ++   Q    T+NI+++AL K     
Sbjct: 586 GIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNR--TFNIMIDALLKGGRHD 643

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            + DL  S++ RG  P++VT  + + +L E+
Sbjct: 644 EAKDLFASLLARGLVPNVVTYWLMMKSLIEQ 674



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/440 (28%), Positives = 222/440 (50%), Gaps = 10/440 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+  L+  Y +SG  K    +  +M R   E  VV   + +      G++    EA ++F
Sbjct: 243 TYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSM---EARKVF 299

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            +MV + H K     + ++L+    EG   +  +  + +V        P+   FN++I  
Sbjct: 300 DSMVKKGH-KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRN---GTQPDHYIFNILIGA 355

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G+VD A+  F +M  +   P+I TY T+MD LC+  ++D+A+   D +  +G  P 
Sbjct: 356 YAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPN 415

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            V F  LI+GLC   +  +A +L   M  +G  PN + +NTL++ LC +G + +A ++ D
Sbjct: 416 GVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFD 475

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            MV      + +TY T+I+G    G+  +  ++L  M       NE  Y+T+I+G  K G
Sbjct: 476 LMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNG 535

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + EDA  L++QM  KG  P  V+YS ++ GL +  +   A+E+   MI  G      TY+
Sbjct: 536 RIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYN 595

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            +++G  ++     A+ ++ ++   +       ++++I  L + G+  EA+ ++  +L+R
Sbjct: 596 IILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLAR 655

Query: 502 GCKPDVVAYSSMIHGLCNAG 521
           G  P+VV Y  M+  L   G
Sbjct: 656 GLVPNVVTYWLMMKSLIEQG 675



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/463 (28%), Positives = 210/463 (45%), Gaps = 48/463 (10%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
           ++F+S  K G ++   S + +L+  YA  G    +  +L  M R         F  +  A
Sbjct: 297 KVFDSMVKKG-HKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGA 355

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y K  +V+EA+  F  M                     Q+GL+                 
Sbjct: 356 YAKHGMVDEAMLAFSKMR--------------------QQGLH----------------- 378

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             PN +T+  V+  +CR+G VD+A+  F  +      P+   + TL+ GLC  ++ D+A 
Sbjct: 379 --PNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAE 436

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L  EM   G  P  + FN L+N LCK G + RA  + D M       + +TY TLI G 
Sbjct: 437 ELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGY 496

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           CL G +D+A  LL+ MV     PNEVTY TIING  K GR  D   +   M  +  +   
Sbjct: 497 CLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGI 556

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
            IYST++ GLF+  +   A +L+  M++ G K     Y+ ++ GLC+    D+A      
Sbjct: 557 VIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDA----LR 612

Query: 428 MINNGCAANAF----TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           M +N C  +      T++ ++    + G+  +A +++  +     V N V Y +++  L 
Sbjct: 613 MFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLI 672

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
           E G L E   ++  +   GC  D    ++++  L   G V +A
Sbjct: 673 EQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKA 715



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 33/273 (12%)

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           ++ +S + +E  A  A+ L+ +M     + +   YS +I    R G  D A   L  +I 
Sbjct: 70  NSALSAVARESPAV-ALSLFNRMP----RADLCTYSIVIGCCSRAGHLDLAFAALGRVIR 124

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEI-WKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            G  A A T+S L+KG     +   A++I  + M    C  N   Y++L+ GLC++ + +
Sbjct: 125 TGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFSYNILLKGLCDENRSQ 184

Query: 490 EARMVWTQMLSR----GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           +A  +   M++     GC PDVV+Y+++I+GL   G +++A  LF+EM  L+    P+  
Sbjct: 185 QALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM--LDQGMSPNCI 242

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           TYN LL+  C       +I +   M   G +PD+VT                      N 
Sbjct: 243 TYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVT---------------------YNT 281

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
           L + L K  R+    K+ + M++K   P +S +
Sbjct: 282 LMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIY 314


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/417 (29%), Positives = 221/417 (52%), Gaps = 5/417 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ ++ +V ++     P+ + FN ++  + +L   D  I L ++M V     D+YT+  
Sbjct: 69  AIDLFSDMVKSRP---FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++  C   ++  A+ +L +M   G  P  VT   L+NG C+   +  A  LVD M   G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P+ V YN +I  LC    ++ A      +      PN VTY  ++NGL    R  D A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R+L  M ++K   N   YS L+    K GK  +A +L+++M+     P+ V YS+L++GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   + DEA ++   M++ GC A+  +Y++L+ GF ++ +    ++++++M++   V N 
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LI G  + G + +A+  ++QM   G  PD+  Y+ ++ GLC+ G +E+AL +F +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           M   + +   D+ TY  ++  +CK   +  +  L  S+  +G  PD+VT    ++ L
Sbjct: 426 M--QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 207/391 (52%), Gaps = 10/391 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T   ++   CR   V +A+ L  +M     +PDI  Y  ++D LCK  R+++A   
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             E++  G  P  VT+  L+NGLC +     AA+L+ +M  K   PN +TY+ L+     
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G + +A  L + MV     P+ VTY +++NGL    R  +  ++   M  +    +   
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVS 332

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  K  + ED MKL+++M ++G   NTV Y+ LI G  + G  D+A+E   +M 
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G + + +TY+ L+ G  ++G+  KA+ I++DM K     + V Y+ +I G+C+ GK+ 
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  ++  +  +G KPD+V Y++M+ GLC  G + E   L+ +M       Q  +   + 
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM------KQEGLMKNDC 506

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            L+      +I+ S +L+  M+  G  P L+
Sbjct: 507 TLS----DGDITLSAELIKKMLSCGYAPSLL 533



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 193/382 (50%), Gaps = 2/382 (0%)

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           KT  R   +++AI LF +M      P I  +  L+  + K  + D  + L  +M+V G  
Sbjct: 58  KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
               TFN++IN  C   ++  A  ++  M   G  P+ VT  +L++G C +  +  AVSL
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           +D+MV     P+ V Y  II+ L K  R  D       +E +    N   Y+ L++GL  
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             +  DA +L   M++K   PN + YSAL+D   + GK  EA+E+  EM+      +  T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YSSL+ G     +  +A +++  M    C+ + V Y+ LI+G C+  ++ +   ++ +M 
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            RG   + V Y+++I G   AG V++A + F++M        PD++TYNILL  LC    
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI--SPDIWTYNILLGGLCDNGE 415

Query: 560 ISHSIDLLNSMMDRGCDPDLVT 581
           +  ++ +   M  R  D D+VT
Sbjct: 416 LEKALVIFEDMQKREMDLDIVT 437



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/422 (27%), Positives = 214/422 (50%), Gaps = 27/422 (6%)

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           ++ +L++A+ L  +M     FP+ V FN L++ + K  +      L   M + G   +  
Sbjct: 62  RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T+N +I+  C    +  A+S+L +M+     P+ VT G+++NG  +  R  D   ++  M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E  +  +   Y+ +I  L K  +  DA   +K++  KG +PN V Y+AL++GLC   + 
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            +A  +L +MI      N  TYS+L+  F ++GK  +A E++++M + +   + V YS L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           ++GLC   ++ EA  ++  M+S+GC  DVV+Y+++I+G C A  VE+ +KLF EM   + 
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM--SQR 359

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
               +  TYN L+    +  ++  + +  + M   G  PD+ T NI L  L +  E    
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGEL--- 416

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
                 E A+ +F            E M ++ +     T+  V++ +C+  +++ A    
Sbjct: 417 ------EKALVIF------------EDMQKREMDLDIVTYTTVIRGMCKTGKVEEA---- 454

Query: 659 WS 660
           WS
Sbjct: 455 WS 456



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 157/318 (49%), Gaps = 4/318 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  +  K   V +A   F   ++    +  V ++ +++N +     +  A    + ++  
Sbjct: 196 IIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I PN +T++ ++    + G V  A +LF EM   + +PDI TY +L++GLC  +R+
Sbjct: 255 K---ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRI 311

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEA  + D M   GC    V++N LING CK   +    KL   M  +G + N VTYNTL
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G    G++DKA     +M      P+  TY  ++ GL   G       +   M++R+ 
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            ++   Y+T+I G+ K GK E+A  L+  +  KG KP+ V Y+ ++ GLC  G   E E 
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491

Query: 424 ILFEMINNGCAANAFTYS 441
           +  +M   G   N  T S
Sbjct: 492 LYTKMKQEGLMKNDCTLS 509



 Score =  158 bits (400), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 188/395 (47%), Gaps = 14/395 (3%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   + + + V +A+ L   MV E   K  + ++N++++ + +    + A +F+  I   
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMV-EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI--- 216

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   I PN +T+  ++  +C      +A +L  +M  +   P++ TY  L+D   K  ++
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  L +EM      P  VT++ L+NGLC +  +  A ++ D M  KGCL + V+YNTL
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I+G C    ++  + L   M     + N VTY T+I G  + G           M+    
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             + + Y+ L+ GL   G+ E A+ +++ M ++    + V Y+ +I G+C+ GK +EA  
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +   +   G   +  TY+++M G    G  H+   ++  M +   + N+   S       
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS------- 509

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
            DG +  +  +  +MLS G  P ++    +  G+C
Sbjct: 510 -DGDITLSAELIKKMLSCGYAPSLL--KDIKSGVC 541


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 227/452 (50%), Gaps = 13/452 (2%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
            +A+  F+ M+ E  C  TV +FN+V+N   +EG    A + ++ +   K M   PN + 
Sbjct: 108 SDALAWFNLMI-ERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGL---KEMGFSPNAIM 163

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N ++    ++  +D A  L+ EM  +   PD  T+  L+ G  K  R ++   LL ++ 
Sbjct: 164 YNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDIS 223

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           V G  P    F++ ++GLC  G L  A + + +M  KG  P+ + +N++I      G  D
Sbjct: 224 VLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLED 283

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA      MV     P+  T  +++ GL   GR  +   ++  M E+   VN   ++ L+
Sbjct: 284 KAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLL 343

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
              FK G    A  LW +M  +G  P+ V +SA IDGL + G  +EA  +  EM+  G  
Sbjct: 344 DKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLI 403

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N F Y+SL+ GF + GK ++A+++ K M     + +    +++I GLC+ G++R A  V
Sbjct: 404 PNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINV 463

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           +  M   G  PD++ Y+++I+G C A  +  A  L N M      S PD+ TYNI ++  
Sbjct: 464 FMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYA--SGSNPDLTTYNIRIHGF 521

Query: 555 CKQSNISHSIDLLNSMMDRG-------CDPDL 579
           C    ++ ++ +L+ ++  G       C P L
Sbjct: 522 CSSRRMNRAVLMLDELVSAGILSFSFACPPTL 553



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 141/501 (28%), Positives = 228/501 (45%), Gaps = 58/501 (11%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P   TF+ +I   CR G +     L   MP  +CEP+ + Y  +++  C   R  +A+  
Sbjct: 54  PCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAW 113

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            + M   GC PT VTFN +IN  CK G +  A KL D +   G  PN + YNTL++G   
Sbjct: 114 FNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVK 173

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              +D+A  L + M      P+ +T+  +++G  K GR  DG R+L  +       +  +
Sbjct: 174 MREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSL 233

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY------------------------ 405
           +   +SGL   G+ ++AM+    M+EKG  P+ + +                        
Sbjct: 234 FDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMV 293

Query: 406 -----------SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
                      S+L+ GL   G+  EA E++ +MI  G + N   ++ L+  FF+ G   
Sbjct: 294 HFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVV 353

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A  +W +M +     + V +S  I GL + G + EA  V+ +ML +G  P+  AY+S+I
Sbjct: 354 GAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLI 413

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G C  G + EALKL  E +       PD+FT N+++  LCKQ  +  +I++   M   G
Sbjct: 414 CGFCKCGKLNEALKL--EKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTG 471

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             PD++T N  +    +         D +N  A  L  R   SG             +P 
Sbjct: 472 LSPDIITYNTLINGYCKAF-------DMVN--ADNLVNRMYASGS------------NPD 510

Query: 635 TSTWERVVQELCRPKRIQAAI 655
            +T+   +   C  +R+  A+
Sbjct: 511 LTTYNIRIHGFCSSRRMNRAV 531



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 138/463 (29%), Positives = 227/463 (49%), Gaps = 9/463 (1%)

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           I  F   G  HL E    L H M  +FHC+    ++N V+N     G    AL ++N ++
Sbjct: 63  ILGFCRKGCIHLGES---LLHLM-PKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMI 118

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
             +  N  P  +TFN VI   C+ G V  A +LF  +      P+   Y TLM+G  K  
Sbjct: 119 E-RGCN--PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMR 175

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            +D+A +L +EM+  G  P  +TFN+L++G  K G      +L+ ++ + G LP+   ++
Sbjct: 176 EIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFD 235

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
             + GLC  G LD+A+  L  M+     P+ + + ++I    + G           M   
Sbjct: 236 ISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHF 295

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               +    S+L+ GL   G+ ++A +L  QM+EKG   N + ++ L+D   + G    A
Sbjct: 296 GLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGA 355

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           + +  EM   G   +   +S+ + G  + G   +A  ++ +M +   + N   Y+ LI G
Sbjct: 356 QSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICG 415

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C+ GKL EA  +   M  RG  PD+   + +I GLC  G +  A+ +F +M   +    
Sbjct: 416 FCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH--QTGLS 473

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           PD+ TYN L+N  CK  ++ ++ +L+N M   G +PDL T NI
Sbjct: 474 PDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNI 516



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 139/512 (27%), Positives = 231/512 (45%), Gaps = 63/512 (12%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
           +ALE    +   + + + P+     ++ K + R+G   N  +LF+++  R  +P  YT+ 
Sbjct: 4   QALEILGRM---REVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFS 60

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            ++ G C++  +     LL  M    C P    +N++IN  C  G    A    + M  +
Sbjct: 61  GIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIER 120

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           GC P  VT+NT+I+  C +GN+ +A  L D +      PN + Y T++NG VK+ R +D 
Sbjct: 121 GCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKM-REIDQ 179

Query: 352 ARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
           A +L   M ++    +   ++ L+SG +K G+ ED  +L K +   G  P+  ++   + 
Sbjct: 180 ANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVS 239

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           GLC  G+ DEA E L +M+  G + +   ++S++  + ++G   KA E +K M       
Sbjct: 240 GLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTP 299

Query: 471 NEVCYSVLIHGLCEDGKLRE-----------------------------------ARMVW 495
           +    S L+ GL  +G+L+E                                   A+ +W
Sbjct: 300 SPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLW 359

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M  RG  PDVVA+S+ I GL   G VEEA  +F EM  L     P+ F YN L+   C
Sbjct: 360 GEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEM--LRKGLIPNNFAYNSLICGFC 417

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           K   ++ ++ L   M  RG  PD+ T N+ +                       L K+ R
Sbjct: 418 KCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGG---------------------LCKQGR 456

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                 +   M Q  LSP   T+  ++   C+
Sbjct: 457 MRSAINVFMDMHQTGLSPDIITYNTLINGYCK 488



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 142/309 (45%), Gaps = 4/309 (1%)

Query: 131 AHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
           A  ++EA+     M+++     ++ +FNSV+    Q GL  +A E Y  +V   H  + P
Sbjct: 244 AGRLDEAMEFLMDMLEK-GLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMV---HFGLTP 299

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +  T + ++  +   G +  A +L  +M  +    +   +  L+D   K   +  A  L 
Sbjct: 300 SPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLW 359

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM+  G FP  V F+  I+GL K G +  A  +   M  KG +PN   YN+LI G C  
Sbjct: 360 GEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKC 419

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G L++A+ L   M     +P+  T   II GL K GR      V M M +     +   Y
Sbjct: 420 GKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITY 479

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI+G  K     +A  L  +M   G  P+   Y+  I G C   + + A  +L E+++
Sbjct: 480 NTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVS 539

Query: 431 NGCAANAFT 439
            G  + +F 
Sbjct: 540 AGILSFSFA 548


>gi|413936133|gb|AFW70684.1| hypothetical protein ZEAMMB73_229858 [Zea mays]
          Length = 375

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/375 (34%), Positives = 201/375 (53%), Gaps = 8/375 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T+N++I  +CR G VD A +L   +P R+C+P+   Y T++ G C   R  +A  +
Sbjct: 8   PNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVDANEI 67

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LDE+  + C P   T NV IN LC+ G L +  + ++ M   GC  N VTYN +I GLC 
Sbjct: 68  LDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGLCE 127

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +GN+D A+ LL  M +  C P+ VTY T++ GL    R  D   +++ M +     +   
Sbjct: 128 QGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDNST 187

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++T+IS   ++G    A++++KQM EKGC PN+  YS +I GL +  K ++A E+L EM 
Sbjct: 188 FNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNEMA 247

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           N G   +   Y  L K   +  K  + V++   +  +      V Y+ ++ GLC +GK  
Sbjct: 248 NKGFNTDKM-YLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTN 306

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  V   M+S GC PD   Y  +I GL   G ++EA +L +  LC       DV + ++
Sbjct: 307 YAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEARELLSR-LC-----SRDVLSNSL 360

Query: 550 LLN-ALCKQSNISHS 563
           + N AL    NI  S
Sbjct: 361 IKNEALLLDQNIRSS 375



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 179/337 (53%), Gaps = 3/337 (0%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M+ +GC P  VT+NV+I+ +C+ G++ +A +L++++  + C PN V YNT++ G C    
Sbjct: 1   MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
              A  +LD +V+  C PNE T    IN L + G      R L  M +     N   Y+ 
Sbjct: 61  WVDANEILDEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNA 120

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +I GL ++G  + A++L   M   GCKP+ V Y+ ++ GLC   + ++AEE++ +M  N 
Sbjct: 121 IIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQND 180

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              +  T+++++  + + G   +A+E++K M +  C  N   YS +I GL +  K+ +A 
Sbjct: 181 RLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQAL 240

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M ++G   D + Y  +   L     +EE +++ +++   +    P    YN +L 
Sbjct: 241 ELLNEMANKGFNTDKM-YLVLTKSLNKEDKIEEVVQVVHKL--QDSGISPQTVLYNTVLL 297

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            LC+    +++ID+L  M+  GC PD  T  I +  L
Sbjct: 298 GLCRNGKTNYAIDVLADMVSCGCMPDESTYIILIEGL 334



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 183/358 (51%), Gaps = 10/358 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I  A  +   V++A  L +++     CK    ++N+VL        +  A E  + 
Sbjct: 12  TYNVIIDAMCREGDVDQARELLNSLPSR-SCKPNTVNYNTVLKGFCSIERWVDANEILDE 70

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V+    N  PN  T N+ I T+CR GL+    +   +M    C  ++ TY  ++ GLC+
Sbjct: 71  VVSE---NCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGLCE 127

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +  +D A+ LL  MQ  GC P  VT+N ++ GLC       A +L+  M     L +  T
Sbjct: 128 QGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLRDNST 187

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +NT+I   C KG + +A+ +  +M    C PN  TY TII GLVK  +      +L  M 
Sbjct: 188 FNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQALELLNEMA 247

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            + F+ ++ +Y  L   L KE K E+ +++  ++ + G  P TV+Y+ ++ GLCR GK +
Sbjct: 248 NKGFNTDK-MYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTN 306

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW-----KDMAKNNCVYNE 472
            A ++L +M++ GC  +  TY  L++G F  G   +A E+      +D+  N+ + NE
Sbjct: 307 YAIDVLADMVSCGCMPDESTYIILIEGLFYEGYLKEARELLSRLCSRDVLSNSLIKNE 364



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 153/309 (49%), Gaps = 25/309 (8%)

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y+ +I  + +EG  + A +L   +  + CKPNTV Y+ ++ G C + +  +A EIL
Sbjct: 9   NNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIERWVDANEIL 68

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+++  C  N  T +  +      G   K     + M+K+ C  N V Y+ +I GLCE 
Sbjct: 69  DEVVSENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTYNAIIGGLCEQ 128

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G +  A  + + M S GCKPD+V Y++++ GLC+A   E+A +L  +M      SQ D  
Sbjct: 129 GNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM------SQNDRL 182

Query: 546 ----TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
               T+N +++  C++  I  ++++   M ++GC+P+  T +  +  L +  +  Q   +
Sbjct: 183 RDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKASKMEQ-ALE 241

Query: 602 FLNELAIRLF--------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            LNE+A + F              K  +     ++V  +    +SPQT  +  V+  LCR
Sbjct: 242 LLNEMANKGFNTDKMYLVLTKSLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCR 301

Query: 648 PKRIQAAIN 656
             +   AI+
Sbjct: 302 NGKTNYAID 310



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 103/247 (41%), Gaps = 61/247 (24%)

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M    C  N V Y+V+I  +C +G + +AR +   + SR CKP+ V Y++++ G C+   
Sbjct: 1   MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRSCKPNTVNYNTVLKGFCSIER 60

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK-------------------------- 556
             +A ++ +E++       P+  T N+ +N LC+                          
Sbjct: 61  WVDANEILDEVV--SENCPPNEATLNVTINTLCRKGLLQKVTRYLEKMSKHGCTTNVVTY 118

Query: 557 ---------QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
                    Q N+  +++LL++M   GC PD+VT N  L  L        D  +   EL 
Sbjct: 119 NAIIGGLCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGL-----CSADRWEDAEELM 173

Query: 608 IRLFKRQRTSG-------------------GFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
           I++ +  R                        ++ + M +K  +P ++T+  ++  L + 
Sbjct: 174 IKMSQNDRLRDNSTFNTIISFWCQKGLILQALEVFKQMPEKGCNPNSTTYSTIIGGLVKA 233

Query: 649 KRIQAAI 655
            +++ A+
Sbjct: 234 SKMEQAL 240


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 223/402 (55%), Gaps = 5/402 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           + N+++  +  +G   +AL F++ ++ A+   +  N +++  +I  VC++G    AI+L 
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLL-AQGFQL--NQVSYGTLINGVCKIGDTRAAIKLL 187

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           +++  R  +P++  Y T++D LCK   + EA  L  EM V G     VT++ LI G C  
Sbjct: 188 QKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIE 247

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A  L++ M LK   PN  TYN L+  LC +G + +A S+L  M+ +   P+ +TY
Sbjct: 248 GKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITY 307

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G   +        V  +M       + + Y+ LI+G  K    ++A+ L+K+M +
Sbjct: 308 STLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P  V YS+LIDGLC+ G+     +++ EM + G  AN  TYSSL+ G  ++G   +
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDR 427

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ ++  M       N   +++L+ GLC+ G+L++A+ V+  +L++G   +V  Y+ MI 
Sbjct: 428 AIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMID 487

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           G C  G +EEAL + ++M   +    PD  T+ I++ AL K+
Sbjct: 488 GHCKQGLLEEALTMLSKM--EDNGCIPDAVTFEIIIIALFKK 527



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/405 (31%), Positives = 213/405 (52%), Gaps = 2/405 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T+T N +IK +C  G V  A+    ++  +  + +  +Y TL++G+CK      A+ L
Sbjct: 127 PDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKL 186

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L ++      P  V ++ +I+ LCK   +  A  L   M +KG   + VTY+TLI+G C+
Sbjct: 187 LQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G L +A+ LL+ MV     PN  TY  +++ L K G+  +   VL  M +     +   
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YSTL+ G F   + + A  ++  M   G  P+   Y+ LI+G C+    DEA  +  EM 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                    TYSSL+ G  +SG+     ++  +M       N + YS LI GLC++G L 
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLD 426

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  ++ +M  +G +P+   ++ ++ GLC  G +++A ++F ++L        +V+TYN+
Sbjct: 427 RAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLT--KGYHLNVYTYNV 484

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
           +++  CKQ  +  ++ +L+ M D GC PD VT  I + AL +K E
Sbjct: 485 MIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 131/255 (51%), Gaps = 2/255 (0%)

Query: 211  AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
            A+ L   + ++  +PD++T   L++  C   ++     +L ++   G  P  +TF  LIN
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 271  GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            GLC  G++ +A    D +  +G   N+V+Y TLI+G+C  G+   A+ LL ++      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 331  NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
            + V Y TII+ L K         +   M  +    +   Y+TLI G    GK ++A+ L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 391  KQMMEKGCKPNTVVYSALIDGLCRVGKP--DEAEEILFEMINNGCAANAFTYSSLMKGFF 448
             +M+ K   PN   Y+ L+D LC+ GK   DE+  +L +M +NGC ANA T+  ++   F
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 449  ESGKGHKAVEIWKDM 463
            E  +  K  ++  +M
Sbjct: 1185 EKDENDKVEKLLHEM 1199



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 136/259 (52%), Gaps = 2/259 (0%)

Query: 246  AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
            AV L   +++ G  P   T N+LIN  C  G++     ++  +  +G  P+ +T+ TLI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 306  GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
            GLCLKG ++KA+   D+++A     N+V+YGT+ING+ K+G      ++L  ++ R    
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 366  NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
            +  +Y+T+I  L K      A  L+ +M  KG   + V Y+ LI G C VGK  EA  +L
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 426  FEMINNGCAANAFTYSSLMKGFFESGKG--HKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
             +M+      N  TY+ L+    + GK    +++ +   M  N C  N V + ++I  L 
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALF 1184

Query: 484  EDGKLREARMVWTQMLSRG 502
            E  +  +   +  +M++RG
Sbjct: 1185 EKDENDKVEKLLHEMIARG 1203



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 168/354 (47%), Gaps = 16/354 (4%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           N+D AVS  +RM+  +  P  + +  I++   K+        +   +E +    +    +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+     G+      +  +++++G  P+TV  + LI GLC  G+  +A     +++  
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 158

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  +Y +L+ G  + G    A+++ + +       N V YS +I  LC+   + EA
Sbjct: 159 GFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEA 218

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++++M  +G   DVV YS++I+G C  G ++EA+ L NEM+       P+V+TYNIL+
Sbjct: 219 YGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVL--KTINPNVYTYNILV 276

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIR 609
           +ALCK+  +  +  +L  M+     PD++T +  +    L  +++  Q   + ++ + + 
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 610 ------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                         K +       + + M QK + P   T+  ++  LC+  RI
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 134/268 (50%), Gaps = 6/268 (2%)

Query: 171  HRALEFYNHIVNAKHM----NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
            H  ++ Y+  V+  H      I P+  T N++I   C +G +     +  ++  R   PD
Sbjct: 936  HNPMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPD 995

Query: 227  IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
              T+ TL++GLC + ++++A+   D++   G     V++  LING+CK G+   A KL+ 
Sbjct: 996  TITFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLR 1055

Query: 287  NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
             +  +   P+ V YNT+I  LC    + KA  L   M       + VTY T+I G   +G
Sbjct: 1056 KIDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVG 1115

Query: 347  RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA--EDAMKLWKQMMEKGCKPNTVV 404
            +  +   +L  M  +  + N   Y+ L+  L KEGK   ++++ +  +M + GCK N V 
Sbjct: 1116 KLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVT 1175

Query: 405  YSALIDGLCRVGKPDEAEEILFEMINNG 432
            +  +I  L    + D+ E++L EMI  G
Sbjct: 1176 FEIIISALFEKDENDKVEKLLHEMIARG 1203



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 132/261 (50%), Gaps = 4/261 (1%)

Query: 316  AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
            AVSL  R+      P+  T   +IN    +G+      +L  + +R +H +   ++TLI+
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 376  GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
            GL  +G+   A+    +++ +G + N V Y  LI+G+C++G    A ++L ++       
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 436  NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
            +   Y++++    +     KA  ++ +M       + V Y+ LI+G C  GKL+EA  + 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 496  TQMLSRGCKPDVVAYSSMIHGLCNAGS--VEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
             +M+ +   P+V  Y+ ++  LC  G   ++E+L + ++M   +   + +  T+ I+++A
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKM--EDNGCKANAVTFEIIISA 1182

Query: 554  LCKQSNISHSIDLLNSMMDRG 574
            L ++        LL+ M+ RG
Sbjct: 1183 LFEKDENDKVEKLLHEMIARG 1203



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 110/220 (50%), Gaps = 8/220 (3%)

Query: 386  AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
            A+ L  ++  KG +P+    + LI+  C +G+      IL +++  G   +  T+++L+ 
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 446  GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
            G    G+ +KA+     +       N+V Y  LI+G+C+ G  R A  +  ++  R  KP
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 506  DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
            DVV Y+++I  LC    V +A  LF EM         DV TYN L+   C    +  +I 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNV--KGISADVVTYNTLIYGFCIVGKLKEAIG 1122

Query: 566  LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
            LLN M+ +  +P++ T NI + AL       ++G D L+E
Sbjct: 1123 LLNKMVLKTINPNVRTYNILVDAL------CKEGKDLLDE 1156



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 83/139 (59%), Gaps = 6/139 (4%)

Query: 144 MVDEFHCK---RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           ++DE H +     V +++S+++ + + G   RA+  +N +   K   I PNT TF +++ 
Sbjct: 396 LIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKM---KDQGIRPNTFTFTILLD 452

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+ G + +A ++F+++  +    ++YTY  ++DG CK+  L+EA+ +L +M+ +GC P
Sbjct: 453 GLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIP 512

Query: 261 TPVTFNVLINGLCKNGELG 279
             VTF ++I  L K  E G
Sbjct: 513 DAVTFEIIIIALFKKDENG 531



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 6/160 (3%)

Query: 137  AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
            AI+L    +D    K  V  +N++++ + +  L  +A   +  + N K   I  + +T+N
Sbjct: 1050 AIKLLRK-IDGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEM-NVK--GISADVVTYN 1105

Query: 197  LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR--LDEAVLLLDEMQ 254
             +I   C +G +  AI L  +M ++   P++ TY  L+D LCKE +  LDE++ +L +M+
Sbjct: 1106 TLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKME 1165

Query: 255  VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             +GC    VTF ++I+ L +  E  +  KL+  M  +G L
Sbjct: 1166 DNGCKANAVTFEIIISALFEKDENDKVEKLLHEMIARGLL 1205



 Score = 46.2 bits (108), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 16/129 (12%)

Query: 541  QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            QPD+FT NIL+N  C    I+ +  +L  ++ RG  PD +T    +  L  K +  +   
Sbjct: 958  QPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK-AL 1016

Query: 601  DFLNELAIRLFKRQRTSGG---------------FKIVEVMLQKFLSPQTSTWERVVQEL 645
             F ++L  + F+  + S G                K++  +  +   P    +  ++  L
Sbjct: 1017 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDAL 1076

Query: 646  CRPKRIQAA 654
            C+ + +  A
Sbjct: 1077 CKHQLVSKA 1085


>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
 gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
 gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/565 (26%), Positives = 276/565 (48%), Gaps = 21/565 (3%)

Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
           V+  MR+ K      ++  +  A+   +  +  + LF  M  E   + TV  F +++   
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM-QELGYEPTVHLFTTLIRGF 213

Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
            +EG    AL   + +   K  ++  + + +N+ I +  ++G VD A + F E+     +
Sbjct: 214 AKEGRVDSALSLLDEM---KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK 270

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           PD  TY +++  LCK NRLDEAV + + ++ +   P    +N +I G    G+   A  L
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           ++    KG +P+ + YN ++  L   G +D+A+ + + M      PN  TY  +I+ L +
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCR 389

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G+      +  SM++     N    + ++  L K  K ++A  ++++M  K C P+ + 
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           + +LIDGL +VG+ D+A ++  +M+++ C  N+  Y+SL+K FF  G+     +I+KDM 
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
             NC  +    +  +  + + G+  + R ++ ++ +R   PD  +YS +IHGL  AG   
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           E  +LF  M   E     D   YNI+++  CK   ++ +  LL  M  +G +P +VT   
Sbjct: 570 ETYELFYSMK--EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627

Query: 585 FLTALK--EKLEAP----QDGTDFLNELAIRLF--------KRQRTSGGFKIVEVMLQKF 630
            +  L   ++L+      ++      EL + ++        K  R    + I+E ++QK 
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687

Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
           L+P   TW  ++  L + + I  A+
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEAL 712



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 256/540 (47%), Gaps = 42/540 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F     +L R R +  +    ++  I     K   V+EA+++F  M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      + ++N +++++ + G    A E  + +  A    + PN  T N+++  +C+
Sbjct: 370 KKD--AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA---GLFPNVRTVNIMVDRLCK 424

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +D A  +F EM  + C PD  T+C+L+DGL K  R+D+A  + ++M    C    + 
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI     +G      K+  +M  + C P+    NT +  +   G  +K  ++ + + 
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A + +P+  +Y  +I+GL+K G A +   +  SM+E+   ++   Y+ +I G  K GK  
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604

Query: 385 DAMKLWKQMMEKGCKP-----------------------------------NTVVYSALI 409
            A +L ++M  KG +P                                   N V+YS+LI
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  IL E++  G   N +T++SL+    ++ + ++A+  ++ M +  C 
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N+V Y +LI+GLC+  K  +A + W +M  +G KP  ++Y++MI GL  AG++ EA  L
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+          PD   YN ++  L   +    +  L      RG      TC + L  L
Sbjct: 785 FDRFKA--NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842



 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 142/538 (26%), Positives = 250/538 (46%), Gaps = 22/538 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ S+I     +        +   + + +RV    ++  +   YG A   +EA    +++
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA----YSL 330

Query: 145 VDEFHCKRTVKS---FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           ++    K ++ S   +N +L  + + G    AL+ +  +      +  PN  T+N++I  
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM----KKDAAPNLSTYNILIDM 386

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +CR G +D A +L   M      P++ T   ++D LCK  +LDEA  + +EM    C P 
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            +TF  LI+GL K G +  A K+ + M    C  N + Y +LI      G  +    +  
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M+   C P+     T ++ + K G    G  +   ++ R+F  +   YS LI GL K G
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
            A +  +L+  M E+GC  +T  Y+ +IDG C+ GK ++A ++L EM   G      TY 
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           S++ G  +  +  +A  ++++        N V YS LI G  + G++ EA ++  +++ +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G  P++  ++S++  L  A  + EAL  F  M   E K  P+  TY IL+N LCK    +
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSM--KELKCTPNQVTYGILINGLCKVRKFN 744

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
            +      M  +G  P  ++    ++ L +     + G          LF R + +GG
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA---------LFDRFKANGG 793



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 204/423 (48%), Gaps = 14/423 (3%)

Query: 85  TFYSLIQHYANSGD----FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           TF SLI      G     +K  E +L    R   +V   S I  F  +G+    E+  ++
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY-TSLIKNFFNHGRK---EDGHKI 504

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +  M+++ +C   ++  N+ ++ + + G   +    +  I   K    +P+  +++++I 
Sbjct: 505 YKDMINQ-NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI---KARRFVPDARSYSILIH 560

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            + + G  +   +LF  M  + C  D   Y  ++DG CK  ++++A  LL+EM+  G  P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           T VT+  +I+GL K   L  A  L +    K    N V Y++LI G    G +D+A  +L
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + ++     PN  T+ ++++ LVK     +      SM+E K   N+  Y  LI+GL K 
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            K   A   W++M ++G KP+T+ Y+ +I GL + G   EA  +      NG   ++  Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNC-VYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           +++++G     +   A  ++++  +    ++N+ C  VL+  L ++  L +A +V   + 
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCV-VLLDTLHKNDCLEQAAIVGAVLR 859

Query: 500 SRG 502
             G
Sbjct: 860 ETG 862



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 183/394 (46%), Gaps = 26/394 (6%)

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN-LDKAVSLL 320
           P ++N L+  + +        +++  M + G  P+  T   ++ G C+K N L +   ++
Sbjct: 98  PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLG-CVKANKLREGYDVV 156

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             M   K  P    Y T+I     +  +     +   M+E  +    ++++TLI G  KE
Sbjct: 157 QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ + A+ L  +M       + V+Y+  ID   +VGK D A +   E+  NG   +  TY
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +S++    ++ +  +AVE+++ + KN  V     Y+ +I G    GK  EA  +  +  +
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           +G  P V+AY+ ++  L   G V+EALK+F EM   +  + P++ TYNIL++ LC+   +
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM---KKDAAPNLSTYNILIDMLCRAGKL 393

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             + +L +SM   G  P++ T NI +                      RL K Q+     
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVD---------------------RLCKSQKLDEAC 432

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            + E M  K  +P   T+  ++  L +  R+  A
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 225/457 (49%), Gaps = 8/457 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  AY    L+EEA  L + M  +      V ++N+V+N + + G Y RA E +  ++ +
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSP-GVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               + P++ T+  ++   C+ G V    ++F +M  R+  PD+  + ++M    +   L
Sbjct: 335 ---GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A++  + ++  G  P  V + +LI G C+ G +  A  L + M  +GC  + VTYNT+
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +HGLC +  L +A  L + M      P+  T   +I+G  KLG   +   +   M+E++ 
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            ++   Y+TL+ G  K G  + A ++W  M+ K   P  + YS L++ LC  G   EA  
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EMI+          +S++KG+  SG         + M     V + + Y+ LI+G  
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631

Query: 484 EDGKLREARMVWTQMLSR--GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            +  + +A  +  +M     G  PDV  Y+S++HG C    ++EA  +  +M+  E    
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI--ERGVN 689

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           PD  TY  ++N    Q N++ +  + + M+ RG  PD
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/515 (26%), Positives = 238/515 (46%), Gaps = 59/515 (11%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V + N ++N + ++G   +   F + +   +   + P+ +T+N +I      GL++ A +
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQV---QEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L   MP +   P +YTY T+++GLCK  + + A  +  EM   G  P   T+  L+   C
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G++    K+  +M  +  +P+ V +++++      GNLDKA+   + +  +  +P+ V
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
            Y  +I G  + G       +   M ++   ++   Y+T++ GL K     +A KL+ +M
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            E+   P++   + LIDG C++G    A E+  +M       +  TY++L+ GF + G  
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A EIW DM     +   + YS+L++ LC  G L EA  VW +M+S+  KP V+  +SM
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591

Query: 514 IHGLCNAGSVEEALKLFNEML-------CLEPKS-------------------------- 540
           I G C +G+  +      +M+       C+   +                          
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651

Query: 541 --QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PDVFTYN +L+  C+Q+ +  +  +L  M++RG +PD  T    +     +      
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ------ 705

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
             D L E              F+I + MLQ+  SP
Sbjct: 706 --DNLTE-------------AFRIHDEMLQRGFSP 725



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 218/480 (45%), Gaps = 54/480 (11%)

Query: 62  EQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF 121
           E+ F  E+ N+ P  G +  G  T+ ++I      G ++  + V   M R        ++
Sbjct: 287 EEAF--ELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343

Query: 122 IFIFKAYGKAHLVEEAIRLFHTM-----VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
             +     K   V E  ++F  M     V +  C      F+S++++  + G   +AL +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC------FSSMMSLFTRSGNLDKALMY 397

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           +N +   K   ++P+ + + ++I+  CR G++  A+ L  EM  + C  D+ TY T++ G
Sbjct: 398 FNSV---KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LCK   L EA  L +EM     FP   T  +LI+G CK G L  A +L   M  K    +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VTYNTL+ G    G++D A  +   MV+ + +P  ++Y  ++N L   G   +  RV  
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M  +       I +++I G  + G A D     ++M+ +G  P+ + Y+ LI G  R  
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634

Query: 417 KPDEAEEILFEMI--NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
              +A  ++ +M     G   + FTY+S++                              
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSIL------------------------------ 664

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
                HG C   +++EA +V  +M+ RG  PD   Y+ MI+G  +  ++ EA ++ +EML
Sbjct: 665 -----HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 246/565 (43%), Gaps = 73/565 (12%)

Query: 105 VLYRMRREKRVVLEKSFI----FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSV 160
           VLYR R +  + L + F+    F F  +    L   A  + H +V      R   + + +
Sbjct: 84  VLYRCRND--LTLGQRFVDQLGFHFPNFKHTSLSLSA--MIHILV---RSGRLSDAQSCL 136

Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           L +I + G+    LE  N + ++   N   N   F+L+I+T  +   +  A + F  +  
Sbjct: 137 LRMIRRSGVSR--LEIVNSL-DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRS 193

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +     I     L+  L +   ++ A  +  E+   G      T N+++N LCK+G++ +
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
               +  +  KG  P+ VTYNTLI     KG +++A  L++ M      P   TY T+IN
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           GL                                    K GK E A +++ +M+  G  P
Sbjct: 314 GLC-----------------------------------KHGKYERAKEVFAEMLRSGLSP 338

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           ++  Y +L+   C+ G   E E++  +M +     +   +SS+M  F  SG   KA+  +
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
             + +   + + V Y++LI G C  G +  A  +  +ML +GC  DVV Y++++HGLC  
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
             + EA KLFNEM   E    PD +T  IL++  CK  N+ ++++L   M ++    D+V
Sbjct: 459 KMLGEADKLFNEM--TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516

Query: 581 TCNIFLTAL------------------KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           T N  L                     KE L  P   +  +N L      +   +  F++
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC----SKGHLAEAFRV 572

Query: 623 VEVMLQKFLSPQTSTWERVVQELCR 647
            + M+ K + P       +++  CR
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCR 597



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 131/271 (48%), Gaps = 11/271 (4%)

Query: 66  SDEIFNSTPKLGSYQLGDS-TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIF 123
           +D++FN   +   +   DS T   LI  +   G+ ++  M L++  +EKR+ L+  ++  
Sbjct: 464 ADKLFNEMTERALFP--DSYTLTILIDGHCKLGNLQN-AMELFQKMKEKRIRLDVVTYNT 520

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   +GK   ++ A  ++  MV +     T  S++ ++N +  +G    A   ++ +++ 
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
              NI P  +  N +IK  CR G   +      +M      PD  +Y TL+ G  +E  +
Sbjct: 580 ---NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENM 636

Query: 244 DEAVLLLDEMQVD--GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            +A  L+ +M+ +  G  P   T+N +++G C+  ++  A  ++  M  +G  P+  TY 
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            +I+G   + NL +A  + D M+     P++
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/469 (30%), Positives = 230/469 (49%), Gaps = 47/469 (10%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           + +++N + + G    A  F   I+    +  L ++     ++   CR   + +A+++F 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILK---VGFLLDSHIVTSLLLGFCRGLNLRDALKVFD 254

Query: 217 EMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            M     C P+  +Y  L+ GLC+  RL+EA  L D+M   GC P+  T+ VLI  LC  
Sbjct: 255 LMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDR 314

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G + +A  L D M  +GC PN  TY  LI GLC  G +++A  +  +MV     P+ +TY
Sbjct: 315 GLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITY 374

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +ING  K GR V    +L  ME+R    N   ++ L+ GL + GK   A+ L K+M++
Sbjct: 375 NALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD 434

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G  P+ V Y+ LIDGLCR G  + A ++L  M +     +  T+++++  F + GK   
Sbjct: 435 NGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADV 494

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA----------RMVWT--------Q 497
           A      M +     +EV  + LI G+C  GK R+A          RM+ T         
Sbjct: 495 ASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILD 554

Query: 498 MLSRGCK-----------------PDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLE 537
           MLS+GCK                 P VV Y++++ GL  +G +  + ++   M    CL 
Sbjct: 555 MLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCL- 613

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
               P+V+ Y I++N LC+   +  +  LL++M D G  P+ VT  + +
Sbjct: 614 ----PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMV 658



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 146/585 (24%), Positives = 271/585 (46%), Gaps = 56/585 (9%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           + +G   + +++     +G  ++ EM + ++ +   ++       +   + +   + +A+
Sbjct: 191 FVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDAL 250

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           ++F  M  E  C     S++ +++ + + G    A    + +         P+T T+ ++
Sbjct: 251 KVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM---GEKGCQPSTRTYTVL 307

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           IK +C  GL+D A  LF EM  R C+P+++TY  L+DGLC++ +++EA  +  +M  DG 
Sbjct: 308 IKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGI 367

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE--------------------- 297
           FP+ +T+N LING CK+G +  A +L+  M  + C PN                      
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427

Query: 298 --------------VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
                         V+YN LI GLC +G+++ A  LL  M +    P+ +T+  IIN   
Sbjct: 428 LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFC 487

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K G+A   +  L  M  +   ++E   +TLI G+   GK  DA+ + + +++        
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPH 547

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
             + ++D L +  K  E   +L ++   G   +  TY++L+ G   SG    +  + + M
Sbjct: 548 SLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELM 607

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
             + C+ N   Y+++I+GLC+ G++ EA  + + M   G  P+ V Y+ M+ G  N G +
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           + AL+    M  +E   + +   Y+ LL              +L+    R  DP+   C 
Sbjct: 668 DRALETVRAM--VERGYELNDRIYSSLLRGF-----------VLSQKGIRETDPE---CI 711

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
             L ++ E+L     G      L  RL K  RT     +V+ +L+
Sbjct: 712 KELISVVEQLGGSTSGLCIF--LVTRLCKEGRTDESNGLVQTILK 754



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/475 (27%), Positives = 211/475 (44%), Gaps = 52/475 (10%)

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y +L+  L K +    A +    M+ DG     + +  ++N LCKNG    A   +  + 
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKIL 222

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV-ASKCMPNEVTYGTIINGLVKLGRA 348
             G L +     +L+ G C   NL  A+ + D M     C PN V+Y  +I+GL ++GR 
Sbjct: 223 KVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRL 282

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +   +   M E+    +   Y+ LI  L   G  + A  L+ +M+ +GCKPN   Y+ L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVL 342

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           IDGLCR GK +EA  +  +M+ +G   +  TY++L+ G+ + G+   A E+   M K  C
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRAC 402

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
             N   ++ L+ GLC  GK  +A  +  +ML  G  PD+V+Y+ +I GLC  G +  A K
Sbjct: 403 KPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYK 462

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT------- 581
           L   M   +   +PD  T+  ++NA CKQ     +   L  M+ +G   D VT       
Sbjct: 463 LLTSMNSFD--LEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDG 520

Query: 582 -CNIFLT--------------------ALKEKLEAPQDGTDFLNELAI------------ 608
            CN+  T                    +L   L+    G     ELA+            
Sbjct: 521 VCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPS 580

Query: 609 ---------RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                     L +    SG F+++E+M      P    +  ++  LC+  R++ A
Sbjct: 581 VVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 118/288 (40%), Gaps = 58/288 (20%)

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           DE  E+    +N  C      YSSL+    +   G  A   ++ M  +  V   + Y  +
Sbjct: 148 DELREVSGFRLNYPC------YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTI 201

Query: 479 IHGLCEDGKLREARMVWTQMLSRG------------------------------------ 502
           ++ LC++G    A M   ++L  G                                    
Sbjct: 202 VNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGT 261

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C P+ V+YS +IHGLC  G +EEA  L ++M   E   QP   TY +L+ ALC +  I  
Sbjct: 262 CAPNSVSYSILIHGLCEVGRLEEAFGLKDQM--GEKGCQPSTRTYTVLIKALCDRGLIDK 319

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAP--------QDG----TDFLNELAI 608
           + +L + M+ RGC P++ T  + +  L    K+E          +DG        N L  
Sbjct: 320 AFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALIN 379

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              K  R    F+++ VM ++   P   T+  +++ LCR  +   A++
Sbjct: 380 GYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH 427


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 228/449 (50%), Gaps = 23/449 (5%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D+A+ LF  +   +  P +  +  ++  + K      A+ L  +M + G  P+ VT ++
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LIN  C  G +G A  ++  +  +G   N +T  T++ GLC+ G + KA+   D +VA  
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
            + +EVTYGT+INGL K+G   +   +L  ME +    N  IY+ ++ GL K+G   +A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+  ++ +G  P+   Y+ LI G C +G+  E   +L +M++     N +TY+ L+   
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + G   KA ++   M +     + V ++ L+ G C    + EAR ++      G  PDV
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
            +Y+ +I G C    ++EAL LFN+M     K  P++ TY+ L++ LCK   IS++ +L 
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKM--NYKKLAPNIVTYSSLIDGLCKSGRISYAWELF 416

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVML 627
           +++ D G  P+++T NI L A                     L K Q      ++  +M 
Sbjct: 417 SAIHDGGPSPNVITYNIMLDA---------------------LCKIQLVDKAIELFNLMF 455

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           ++ L+P  S++  ++   C+ KRI  A+N
Sbjct: 456 ERGLTPNVSSYNILINGYCKSKRIDEAMN 484



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 136/459 (29%), Positives = 228/459 (49%), Gaps = 12/459 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN---ILP 190
           +++A+ LF  ++   H   +V  FN +L  I++   Y  A+        +K M    I P
Sbjct: 59  IDDAVALFTRLI-TMHPLPSVVEFNMILGSIVKMKHYPTAISL------SKQMGLRGITP 111

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + +T +++I   C LG +  A  +   +  R  + +  T  T+M GLC    + +A+   
Sbjct: 112 SIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFH 171

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D +   G     VT+  LINGLCK G    A +L+  M  +   PN V YN ++ GLC  
Sbjct: 172 DSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKD 231

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G + +A  L   +V     P+  TY  +I+G   LG+  +  R+L  M +R  ++N Y Y
Sbjct: 232 GLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTY 291

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI  L K+G    A  +   M+E+G +P+ V ++ L+ G C      EA ++      
Sbjct: 292 NILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAE 351

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   + ++Y+ L+ G+ ++ +  +A+ ++  M       N V YS LI GLC+ G++  
Sbjct: 352 CGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISY 411

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +++ +   G  P+V+ Y+ M+  LC    V++A++LFN M   E    P+V +YNIL
Sbjct: 412 AWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLM--FERGLTPNVSSYNIL 469

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +N  CK   I  +++L   M  R   PD VT N  +  L
Sbjct: 470 INGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGL 508



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 124/409 (30%), Positives = 209/409 (51%), Gaps = 8/409 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +  +++  +   G   +ALEF++ +V       L + +T+  +I  +C++GL   A +L 
Sbjct: 150 TLTTIMKGLCINGEVRKALEFHDSVV---AQGFLLDEVTYGTLINGLCKIGLTREAFELL 206

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M  +   P++  Y  ++DGLCK+  + EA  L  ++   G  P   T+  LI+G C  
Sbjct: 207 HKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGL 266

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+     +L+ +M  +    N  TYN LI  LC KG L KA  + + M+     P+ VT+
Sbjct: 267 GQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTF 326

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G       V+  ++  +  E     + + Y+ LI G  K  + ++A+ L+ +M  
Sbjct: 327 NTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNY 386

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   PN V YS+LIDGLC+ G+   A E+   + + G + N  TY+ ++    +     K
Sbjct: 387 KKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDK 446

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+E++  M +     N   Y++LI+G C+  ++ EA  ++ +M  R   PD V Y+ +I 
Sbjct: 447 AIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLID 506

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           GLC +G +  A +LFN M    P    DV TYNIL +A  K   I H I
Sbjct: 507 GLCKSGRISHAWELFNVMHDGGPPV--DVITYNILFDAFSK---IQHVI 550



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 107/218 (49%), Gaps = 8/218 (3%)

Query: 134 VEEAIRLFHTMVDEFHCKRT--VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           V EA +LF T  +   C  T  V S+N ++    +      AL  +N +    +  + PN
Sbjct: 339 VVEARKLFDTFAE---CGITPDVWSYNILIIGYCKNNRIDEALSLFNKM---NYKKLAPN 392

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +T++ +I  +C+ G +  A +LF  +      P++ TY  ++D LCK   +D+A+ L +
Sbjct: 393 IVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFN 452

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            M   G  P   ++N+LING CK+  +  A  L + M  +  +P+ VTYN LI GLC  G
Sbjct: 453 LMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSG 512

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            +  A  L + M       + +TY  + +   K+   +
Sbjct: 513 RISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHVI 550


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/447 (31%), Positives = 229/447 (51%), Gaps = 24/447 (5%)

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           VD+ +  F  M  ++  P I+ +  L+  + +      A+ L  ++   G  P+  T  +
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LIN  C    L  A  L+  +   G  PN VT+NTLI+G C+ G + KA++    ++A  
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
              +E +YG++INGL K G+  D  ++L  MEE     N   YST+I GL K+    DA+
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           +L+  +  +G   + V Y++LI G C VG+  EA  +L  M+      + +T++ L+   
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + G+  +A  ++  M K     + V Y+ L+ G C    + EAR ++ +M+ RG +PDV
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDV 335

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           + Y+ +I+G C    V+EA+ LF E+ C      P++ TYN L++ LCK   +S   +L+
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRC--KNLVPNLATYNSLIDGLCKLGRMSCVQELV 393

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVML 627
           + M DRG  PD+VT NIFL A  +    P        E AI LF RQ   G         
Sbjct: 394 DEMCDRGQSPDIVTYNIFLDAFCK--SKPY-------EKAISLF-RQIVQG--------- 434

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAA 654
              + P    ++ +V+  C+ ++++ A
Sbjct: 435 ---IWPDFYMYDVIVENFCKGEKLKIA 458



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 260/547 (47%), Gaps = 51/547 (9%)

Query: 109 MRREKRVVLEKSFIFIF-----KAYG-----KAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
           M    R VL +S   +F     + +G     K H V++ +  F+ M+ + H    +  F+
Sbjct: 1   MLNGSRYVLPRSIHILFFSQHVRFFGHLHPPKFHTVDDTLLSFNRMLRK-HPPPPIFVFD 59

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
            +L  I++ G Y  A+  ++ +       I P+  T  ++I   C    +  A  L   +
Sbjct: 60  KLLGAIVRMGHYPTAISLFSQL---HSKGITPSIATLTILINCYCHQAHLSFAFSLLGTI 116

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
                +P++ T+ TL++G C    + +A+    ++   G      ++  LINGLCKNG+ 
Sbjct: 117 LKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQT 176

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A +L+  M      PN +TY+T+I GLC    +  A+ L   + +   + + V Y ++
Sbjct: 177 RDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSL 236

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           I+G   +G+  +  R+L  M     + ++Y ++ L+  L KEG+  +A  ++  MM++G 
Sbjct: 237 IHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGE 296

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
           KP+ V Y+AL++G C      EA E+   M+  G   +   Y+ L+ G+ +     +A+ 
Sbjct: 297 KPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMV 356

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++K++   N V N   Y+ LI GLC+ G++   + +  +M  RG  PD+V Y+  +   C
Sbjct: 357 LFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFC 416

Query: 519 NAGSVEEALKLFNEML-----------------CLEPKSQ---------------PDVFT 546
            +   E+A+ LF +++                 C   K +               P+V T
Sbjct: 417 KSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRT 476

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           Y I++NALCK  +   ++ LL+ M D  C PD VT    + AL+E+ E     TD   +L
Sbjct: 477 YTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNE-----TDKAEKL 531

Query: 607 AIRLFKR 613
            + + +R
Sbjct: 532 RLEMIER 538



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 237/495 (47%), Gaps = 52/495 (10%)

Query: 122 IFIFKAYGKAHLVEEAIRLFH-----TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
           IF+F       L+   +R+ H     ++  + H K    S  + L ++I    +   L F
Sbjct: 55  IFVFDK-----LLGAIVRMGHYPTAISLFSQLHSKGITPSI-ATLTILINCYCHQAHLSF 108

Query: 177 -YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
            ++ +     M   PN +TFN +I   C  G+V  A+    ++  +    D ++Y +L++
Sbjct: 109 AFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLIN 168

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           GLCK  +  +A+ LL +M+ D   P  +T++ +I+GLCK+  +  A +L   +  +G L 
Sbjct: 169 GLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILV 228

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           + V YN+LIHG C  G   +A  LL  MV     P++ T+  +++ L K GR V+   V 
Sbjct: 229 DVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVF 288

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG------------------ 397
             M +R    +   Y+ L+ G        +A +L+ +M+++G                  
Sbjct: 289 AVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKI 348

Query: 398 --------------CK---PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
                         CK   PN   Y++LIDGLC++G+    +E++ EM + G + +  TY
Sbjct: 349 DMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTY 408

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV-CYSVLIHGLCEDGKLREARMVWTQML 499
           +  +  F +S    KA+ +++ + +   ++ +   Y V++   C+  KL+ A      +L
Sbjct: 409 NIFLDAFCKSKPYEKAISLFRQIVQG--IWPDFYMYDVIVENFCKGEKLKIAEEALQHLL 466

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             GC P+V  Y+ MI+ LC   S +EA+ L ++M   +    PD  T+  ++ AL +++ 
Sbjct: 467 IHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMD--DNDCPPDAVTFETIIGALQERNE 524

Query: 560 ISHSIDLLNSMMDRG 574
              +  L   M++RG
Sbjct: 525 TDKAEKLRLEMIERG 539



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 208/432 (48%), Gaps = 30/432 (6%)

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K + +D+ +L  + M      P    F+ L+  + + G    A  L   +  KG  P+  
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           T   LI+  C + +L  A SLL  ++     PN VT+ T+ING    G         + +
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
             + + ++E+ Y +LI+GL K G+  DA++L ++M E   +PN + YS +IDGLC+    
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            +A  +   + + G   +   Y+SL+ G    G+  +A  +   M + N   ++  +++L
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           +  LC++G++ EA+ V+  M+ RG KPD+V Y++++ G C + +V EA +LFN M+  + 
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV--KR 329

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
             +PDV  YN+L+N  CK   +  ++ L   +  +   P+L T N  +           D
Sbjct: 330 GLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLI-----------D 378

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN-- 656
           G          L K  R S   ++V+ M  +  SP   T+   +   C+ K  + AI+  
Sbjct: 379 G----------LCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLF 428

Query: 657 -----KCWSNLY 663
                  W + Y
Sbjct: 429 RQIVQGIWPDFY 440



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 185/395 (46%), Gaps = 5/395 (1%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
            Y L + ++ SLI     +G  +    +L +M  +       ++  +     K  L+ +A
Sbjct: 155 GYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADA 214

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           +RLF ++V        V ++NS+++     G +  A      +V     NI P+  TFN+
Sbjct: 215 LRLF-SLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRG---NINPDDYTFNI 270

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           ++  +C+ G +  A  +F  M  R  +PDI TY  LM+G C  N + EA  L + M   G
Sbjct: 271 LVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRG 330

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  + +NVLING CK   +  A  L   +  K  +PN  TYN+LI GLC  G +    
Sbjct: 331 LEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQ 390

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            L+D M      P+ VTY   ++   K  +  + A  L     +    + Y+Y  ++   
Sbjct: 391 ELVDEMCDRGQSPDIVTYNIFLDAFCK-SKPYEKAISLFRQIVQGIWPDFYMYDVIVENF 449

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K  K + A +  + ++  GC PN   Y+ +I+ LC+    DEA  +L +M +N C  +A
Sbjct: 450 CKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDA 509

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            T+ +++    E  +  KA ++  +M +   V +E
Sbjct: 510 VTFETIIGALQERNETDKAEKLRLEMIERGLVNDE 544



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 210/443 (47%), Gaps = 6/443 (1%)

Query: 60  KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK 119
           ++   F+  +  +  K+G +Q    TF +LI  +  +G           +  +   + E 
Sbjct: 103 QAHLSFAFSLLGTILKMG-FQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEF 161

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +     K     +A++L   M ++   +  + ++++V++ + ++ L   AL  ++ 
Sbjct: 162 SYGSLINGLCKNGQTRDALQLLQKMEEDL-VRPNLITYSTVIDGLCKDRLIADALRLFSL 220

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + +     IL + + +N +I   C +G    A +L   M   N  PD YT+  L+D LCK
Sbjct: 221 VTSR---GILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCK 277

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E R+ EA  +   M   G  P  VT+N L+ G C +  +  A +L + M  +G  P+ + 
Sbjct: 278 EGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLN 337

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN LI+G C    +D+A+ L   +     +PN  TY ++I+GL KLGR      ++  M 
Sbjct: 338 YNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMC 397

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R    +   Y+  +    K    E A+ L++Q+++ G  P+  +Y  +++  C+  K  
Sbjct: 398 DRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLK 456

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            AEE L  ++ +GC  N  TY+ ++    +     +A+ +   M  N+C  + V +  +I
Sbjct: 457 IAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII 516

Query: 480 HGLCEDGKLREARMVWTQMLSRG 502
             L E  +  +A  +  +M+ RG
Sbjct: 517 GALQERNETDKAEKLRLEMIERG 539



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 25/261 (9%)

Query: 45  VSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEM 104
           V+ N  ME     N  SE   + E+FN   K G     D   Y+++ +     D     M
Sbjct: 301 VTYNALMEGFCLSNNVSE---ARELFNRMVKRGLEP--DVLNYNVLINGYCKIDMVDEAM 355

Query: 105 VLYRMRREKRVVLE----KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKR----TVKS 156
           VL++  R K +V       S I      G+   V+E       +VDE  C R     + +
Sbjct: 356 VLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQE-------LVDEM-CDRGQSPDIVT 407

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N  L+   +   Y +A+  +  IV      I P+   ++++++  C+   +  A +  +
Sbjct: 408 YNIFLDAFCKSKPYEKAISLFRQIVQG----IWPDFYMYDVIVENFCKGEKLKIAEEALQ 463

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            + +  C P++ TY  +++ LCK+   DEA+ LL +M  + C P  VTF  +I  L +  
Sbjct: 464 HLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERN 523

Query: 277 ELGRAAKLVDNMFLKGCLPNE 297
           E  +A KL   M  +G + +E
Sbjct: 524 ETDKAEKLRLEMIERGLVNDE 544


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 227/419 (54%), Gaps = 5/419 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F +++  +  +G  ++AL F++ ++      I  + +++  +I  VC++G    AI+L 
Sbjct: 131 TFTTLIKGLCLKGQVNKALHFHDKLLAQ---GIKFDQVSYGTLINGVCKIGDTRGAIKLV 187

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R++  R  +P++  Y T++D LCK   + EA  L  EM   G     VT+  LI G C  
Sbjct: 188 RKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIA 247

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            +L  A  L++ M LK   PN  TYN L+  LC +G + +A ++L  M+ +   P+ +TY
Sbjct: 248 SKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITY 307

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G   +        V  +M       + + Y+ LI+G  K    ++A+ L+K+M +
Sbjct: 308 STLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQ 367

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P  V YS+LIDGLC+ G+     +++ EM + G  AN  TY+SL+ G  ++G   +
Sbjct: 368 KNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDR 427

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ ++  M           +++L+ GLC+ G+L++A+  +  +L++G   DV  Y+ MI+
Sbjct: 428 AIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMIN 487

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           G C  G +EEAL + ++M   E    P+  T++I++NAL K+     +  LL  M+ RG
Sbjct: 488 GHCKQGLLEEALTMLSKM--EENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRG 544



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/494 (28%), Positives = 243/494 (49%), Gaps = 37/494 (7%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++A+  F+ M+   H    ++ FN +L+   +   Y  A+   +H +  K   I P+ +
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQ-FNKILDSFAKIKHYSTAVSL-SHRLELK--GIQPDLI 95

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I   C +G +     +  ++  R  +P   T+ TL+ GLC + ++++A+   D++
Sbjct: 96  TLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 155

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G     V++  LING+CK G+   A KLV  +  +   PN   YNT+I  LC    +
Sbjct: 156 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 215

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A  L   M A     + VTY T+I G     +  +   +L  M  +  + N Y Y+ L
Sbjct: 216 SEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNIL 275

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +  L KEGK ++A  +   M++   KP+ + YS L+DG   V +  +A+ +   M   G 
Sbjct: 276 VDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGV 335

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  +Y+ L+ GF ++    +A+ ++K+M + N V   V YS LI GLC+ G++     
Sbjct: 336 TPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWD 395

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------LC 535
           +  +M  RG   +V+ Y+S+I GLC  G ++ A+ LFN+M                  LC
Sbjct: 396 LIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLC 455

Query: 536 ---------------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
                          L      DV+ YN+++N  CKQ  +  ++ +L+ M + GC P+ V
Sbjct: 456 KGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAV 515

Query: 581 TCNIFLTALKEKLE 594
           T +I + AL +K E
Sbjct: 516 TFDIIINALFKKDE 529



 Score =  132 bits (332), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 172/354 (48%), Gaps = 16/354 (4%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           N+D AVS  +RM+  +  P  + +  I++   K+        +   +E +    +    +
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLN 98

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+     G+      +  +++++G +P+T+ ++ LI GLC  G+ ++A     +++  
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  +Y +L+ G  + G    A+++ + +       N   Y+ +I  LC+   + EA
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEA 218

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++++M ++G   DVV Y+++I+G C A  ++EA+ L NEM+       P+V+TYNIL+
Sbjct: 219 YGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVL--KTINPNVYTYNILV 276

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNELAIR 609
           +ALCK+  +  + ++L  M+     PD++T +  +    L  +L+  Q   + ++ + + 
Sbjct: 277 DALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVT 336

Query: 610 ------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                         K +       + + M QK + P   T+  ++  LC+  RI
Sbjct: 337 PDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 84/141 (59%), Gaps = 3/141 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++NS+++ + + G   RA+  +N +   K   I P + TF +++  +C+ G + +A +
Sbjct: 409 VITYNSLIDGLCKNGHLDRAIALFNKM---KDQGIRPCSFTFTILLDGLCKGGRLKDAQE 465

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
            F+++  +    D+Y Y  +++G CK+  L+EA+ +L +M+ +GC P  VTF+++IN L 
Sbjct: 466 AFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALF 525

Query: 274 KNGELGRAAKLVDNMFLKGCL 294
           K  E  +A KL+  M  +G L
Sbjct: 526 KKDENDKAEKLLRQMICRGLL 546



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 63/135 (46%), Gaps = 23/135 (17%)

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +V++A+  FN MLC+  +  P +  +N +L++  K  + S ++ L + +  +G  PDL+T
Sbjct: 39  NVDDAVSQFNRMLCM--RHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 582 CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
            NI +                            + + GF ++  +L++   P T T+  +
Sbjct: 97  LNILINCFCH---------------------MGQITFGFSVLAKILKRGYQPHTITFTTL 135

Query: 642 VQELCRPKRIQAAIN 656
           ++ LC   ++  A++
Sbjct: 136 IKGLCLKGQVNKALH 150



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 18/180 (10%)

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYN 548
           +A   + +ML     P ++ ++ ++           A+ L +    LE K  QPD+ T N
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHR---LELKGIQPDLITLN 98

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNEL 606
           IL+N  C    I+    +L  ++ RG  P  +T    +  L  K ++       D L   
Sbjct: 99  ILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQ 158

Query: 607 AIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            I+            + K   T G  K+V  +  +   P    +  ++  LC+ + +  A
Sbjct: 159 GIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEA 218


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/538 (26%), Positives = 252/538 (46%), Gaps = 16/538 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +   Y + + V+ A  LF  M      +  V S+ +++  + + G    A+E +  
Sbjct: 12  TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVV-SYATLIEGLCEAGRIDEAVELFGE 70

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +         P+   +  ++K +C     +  + + R M      P    Y  ++D  C+
Sbjct: 71  MDQ-------PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 123

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E +  EA  +L EM   G  P  VT   +IN  CK G +  A ++++ M L+GC PN  T
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN L+ G C +G + KA++LL++M A    P+ VTY  +I G    G      R+L  ME
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 243

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 ++Y Y+ LI+ L K+G+ + A  L+  +  +G KPN V +++LI+GLC+ GK D
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKAD 303

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A + L +M++ GC  + +TYSS ++   +     + +    +M + +   + V Y+++I
Sbjct: 304 IAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVI 363

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           H L ++         W +M+S GC PDVV Y++ +   C  G + EA  +  EM   +  
Sbjct: 364 HKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM--SKNG 421

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQD 598
              D   YN L++         H++ +L  M      P+  T  I L  L + +L     
Sbjct: 422 VTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVE--- 478

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             D L      ++K    +  F + +VM +    P + T+  +++      R + A +
Sbjct: 479 --DVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATS 534



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 256/563 (45%), Gaps = 73/563 (12%)

Query: 93  YANSGDFKSLEMVLYRMRREKRVVLEKSF-----------IFIFKAYGKAHLVEEAIRLF 141
           YA   DF+  E    R  +E   +L++ F             +  AY K   + +A+R+ 
Sbjct: 114 YAAVVDFRCRE----RKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVL 169

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M     CK  V ++N+++     EG  H+A+   N +   +   + P+ +T+NL+I+ 
Sbjct: 170 ELMKLR-GCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM---RACGVNPDAVTYNLLIRG 225

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C  G +++A +L R M       D YTY  L++ LCK+ R D+A  L D ++  G  P 
Sbjct: 226 QCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPN 285

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC-LKGN-------- 312
            VTFN LINGLCK+G+   A K ++ M   GC P+  TY++ I  LC +KG+        
Sbjct: 286 AVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIG 345

Query: 313 --LDKAV--------------------SLLDR----MVASKCMPNEVTYGTIINGLVKLG 346
             L K V                     L+ R    MV+S C P+ VTY T +      G
Sbjct: 346 EMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEG 405

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           R  +   VLM M +    V+   Y+TL+ G    G+ + A+ + KQM      PN   Y 
Sbjct: 406 RLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYF 465

Query: 407 ALIDGLCR--------------VGKPDEAEEI--LFE-MINNGCAANAFTYSSLMKGFFE 449
            L+  L R              V K  E  ++  LF+ M  N    N+ TYSS+++GF E
Sbjct: 466 ILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSE 525

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G+  +A  +   M +++   NE  Y+ L+   C+  +  +A ++   M+  G  P +++
Sbjct: 526 DGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMS 585

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y  ++ GL   G  ++A ++F  M        PD   + ++++ L K+ +   S +++  
Sbjct: 586 YQHLLSGLICEGQTDKAKEIF--MNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIM 643

Query: 570 MMDRGCDPDLVTCNIFLTALKEK 592
           +    C P   T  +    L ++
Sbjct: 644 LERMNCRPSHQTYAMLTEELPDR 666



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 195/393 (49%), Gaps = 9/393 (2%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P   TFN LI G C+  ++  A  L D M L+G   + V+Y TLI GLC  G +D+A
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEA 64

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           V L   M      P+   Y  ++ GL    R  +G  +L  M+E  +  +   Y+ ++  
Sbjct: 65  VELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             +E KA++A ++ ++M EKG  P  V  +A+I+  C+ G+  +A  +L  M   GC  N
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            +TY++L++GF   GK HKA+ +   M       + V Y++LI G C DG +  A  +  
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALC 555
            M   G   D   Y+++I+ LC  G  ++A  LF+    LE +  +P+  T+N L+N LC
Sbjct: 241 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDS---LETRGIKPNAVTFNSLINGLC 297

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           K      +   L  M+  GC PD  T + F+  L  K++  Q+G  F+ E+  +  K   
Sbjct: 298 KSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC-KMKGSQEGLSFIGEMLQKDVKPST 356

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
            +    I +++ ++       TW  +V   C P
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNP 389



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 175/370 (47%), Gaps = 29/370 (7%)

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   G  P+  T+N+LI G C    +D A  L D+M       + V+Y T+I GL + GR
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +   +   M++   H    +Y+ L+ GL    + E+ + + ++M E G +P+T  Y+A
Sbjct: 61  IDEAVELFGEMDQPDMH----MYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           ++D  CR  K  EAEE+L EM   G A    T ++++  + + G+   A+ + + M    
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  N   Y+ L+ G C +GK+ +A  +  +M + G  PD V Y+ +I G C  G +E A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 528 KLFNEMLCLEPKSQ-PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +L   M   E      D +TYN L+NALCK      +  L +S+  RG  P+ VT N  +
Sbjct: 237 RLLRLM---EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 293

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                                  L K  +    +K +E M+    +P T T+   ++ LC
Sbjct: 294 NG---------------------LCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 332

Query: 647 RPKRIQAAIN 656
           + K  Q  ++
Sbjct: 333 KMKGSQEGLS 342



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 118/497 (23%), Positives = 209/497 (42%), Gaps = 80/497 (16%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+Q + N G       +L +MR         ++  + +       +E A RL   M
Sbjct: 183 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 242

Query: 145 ------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
                  D++       ++N+++N + ++G   +A   ++ +   +   I PN +TFN +
Sbjct: 243 EGDGLIADQY-------TYNALINALCKDGRTDQACSLFDSL---ETRGIKPNAVTFNSL 292

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           I  +C+ G  D A +   +M    C PD YTY + ++ LCK     E +  + EM     
Sbjct: 293 INGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDV 352

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL----- 313
            P+ V + ++I+ L K    G  A+    M   GC P+ VTY T +   C++G L     
Sbjct: 353 KPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 412

Query: 314 ------------------------------DKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
                                         D AVS+L +M +   +PN+ TY  ++  LV
Sbjct: 413 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 472

Query: 344 KLGRAVDGARVLMS------------------MEERKFHVNEYIYSTLISGLFKEGKAED 385
           ++ R V+    L                    M++ +F  N   YS+++ G  ++G+ E+
Sbjct: 473 RM-RLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEE 531

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A  L   M E     N  +Y+AL+   C+  +  +A  ++  MI +G      +Y  L+ 
Sbjct: 532 ATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLS 591

Query: 446 GFFESGKGHKAVEI-----WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           G    G+  KA EI     WKD +      +E+ + V+I GL + G    +R +   +  
Sbjct: 592 GLICEGQTDKAKEIFMNSRWKDYSP-----DEIVWKVIIDGLIKKGHSDISREMIIMLER 646

Query: 501 RGCKPDVVAYSSMIHGL 517
             C+P    Y+ +   L
Sbjct: 647 MNCRPSHQTYAMLTEEL 663


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 147/568 (25%), Positives = 267/568 (47%), Gaps = 15/568 (2%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+ +LI+      D +  +  L  M R        +F  +   Y +   +E A  LF  
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCK 189

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M      +  V S+ +++    + G    ALE +  +         P+  T   ++K +C
Sbjct: 190 MPFRGFSQDAV-SYAALIEGFCEAGRIDEALELFREMTQ-------PDMYTHAALVKGLC 241

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G  +  + + ++M      P    Y  L+D  C+E + +EA  +L+EM   G  P  V
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T  +++N  C+ G +  A ++ ++M  KGC PN  TYN ++ G C  G + KA++LLD+M
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                 P+ VTY  +I G    G      R+L  ME      ++Y Y+ LI  L K GK 
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A  L+  +  +G +PN+V ++ +I+GLC+ GK D A   L  MI+ G A + +TYS  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPF 481

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           ++   ++    + +    +M + +   + V Y+++I+ L  +     A  +W QM+S+GC
Sbjct: 482 IENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGC 541

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PDVV Y++ +   CN G ++EA  +  EM   + ++  D   YN L++          +
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLDEAENVVTEM--KKCRTIVDAMAYNTLIDGHTSIGQTDRA 599

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
           + +L  M      P+  T  I L  L ++  A     + +   A  ++K    +  F++ 
Sbjct: 600 VTILKHMTGVASMPNHFTFFILLRHLLQRRLA-----EHVPLKATSVWKTIELADVFELF 654

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRI 651
           E+M +  +     T+  +++     +R+
Sbjct: 655 ELMKKNSVPSSARTYLSILEGFSEERRL 682



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 199/462 (43%), Gaps = 43/462 (9%)

Query: 155 KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR---------- 204
           + F S+L    +  L    L  + H+   +H    P   T+N +I+ +CR          
Sbjct: 94  RPFRSLLTHFSRYALTPLMLRLFAHMY--RHAPPAPTGATYNALIRALCRRADLRHAQRY 151

Query: 205 --------------------LGL-----VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
                               LG      ++ A  LF +MP R    D  +Y  L++G C+
Sbjct: 152 LSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCE 211

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R+DEA+ L  EM      P   T   L+ GLC  G       ++  M   G  P    
Sbjct: 212 AGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRA 267

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y  L+   C +   ++A  +L+ M  S  MP  VT   ++N   + GR     RV  SM 
Sbjct: 268 YAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMR 327

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +    N + Y+ ++ G    GK   AM L  QM E G +P+ V Y+ LI G C  G   
Sbjct: 328 FKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIG 387

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A  +L  M  NG AA+ +TY+ L+    ++GK  +A  ++  +       N V ++ +I
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +GLC+ GK   A      M+S G  PD   YS  I  LC     +E L   +EM  L+  
Sbjct: 448 NGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEM--LQKD 505

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            +P    Y I++N L  + N   +  +   M+ +GC PD+VT
Sbjct: 506 VKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVT 547



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 154/593 (25%), Positives = 270/593 (45%), Gaps = 67/593 (11%)

Query: 57  GNAKSEQ-PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDF-KSLEMVLYRMRREKR 114
           G  +++Q   + ++F   P  G  Q   S + +LI+ +  +G   ++LE  L+R   +  
Sbjct: 173 GYCRTQQLEVAHDLFCKMPFRGFSQDAVS-YAALIEGFCEAGRIDEALE--LFREMTQPD 229

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           +    + +   K    A   EE + +   M  E   + T +++ +++++  +E     A 
Sbjct: 230 MYTHAALV---KGLCDAGRGEEGLCMLQKM-KELGWRPTTRAYAALVDLWCREQKAEEAE 285

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           +  N + ++    ++P  +T  +V+   CR G +  A+++F  M  + CEP+++TY  ++
Sbjct: 286 KILNEMFDS---GLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIV 342

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            G C   ++ +A+ LLD+M+  G  P  VT+N+LI G C +G +G A +L+  M   G  
Sbjct: 343 QGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLA 402

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
            ++ TYN LI  LC  G +D+A SL D +      PN VT+ T+INGL K G+       
Sbjct: 403 ADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTF 462

Query: 355 LMSM-------------------------EERKFHVNEYI----------YSTLISGLFK 379
           L +M                         +E  F ++E +          Y+ +I+ LF 
Sbjct: 463 LENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFN 522

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           E     A ++W QM+ +GC P+ V Y+  +   C  G+ DEAE ++ EM       +A  
Sbjct: 523 ERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMA 582

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL-----CEDGKLREARMV 494
           Y++L+ G    G+  +AV I K M     + N   + +L+  L      E   L+ A  V
Sbjct: 583 YNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLK-ATSV 641

Query: 495 WT-----------QMLSRGCKPDVV-AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           W            +++ +   P     Y S++ G      ++E   L + M         
Sbjct: 642 WKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNE 701

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
           D+  YN L+N  CK    S +  LL SM+  G  P+L+     L+ L  + +A
Sbjct: 702 DI--YNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQA 752



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 113/401 (28%), Positives = 186/401 (46%), Gaps = 37/401 (9%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           PT  T+N LI  LC+  +L  A + +  M   G  P+  T+N+LI G C    L+ A  L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
             +M       + V+Y  +I G  + GR  +   +   M +     + Y ++ L+ GL  
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCD 242

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G+ E+ + + ++M E G +P T  Y+AL+D  CR  K +EAE+IL EM ++G      T
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
            + ++  +   G+   AV +++ M    C  N   Y+ ++ G C  GK+ +A  +  QM 
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQS 558
             G +PDVV Y+ +I G C  G +  A +L   M   E      D +TYN+L++ALCK  
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLM---EGNGLAADQYTYNVLIDALCKTG 419

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            +  +  L + +  RG  P+ VT N  +  L +                         +G
Sbjct: 420 KVDEACSLFDGLEYRGIRPNSVTFNTVINGLCK-------------------------AG 454

Query: 619 GFKIVEVMLQKFLS----PQTSTWERVVQELCRPKRIQAAI 655
            F +    L+  +S    P T T+   ++ LC+ K  Q  +
Sbjct: 455 KFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGL 495



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 108/493 (21%), Positives = 199/493 (40%), Gaps = 73/493 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +++Q + N+G       +L +MR    E  VV   ++  + +       +  A RL 
Sbjct: 337 TYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVV---TYNLLIRGQCIDGHIGSAFRLL 393

Query: 142 HTM------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
             M       D++       ++N +++ + + G    A   ++ +   ++  I PN++TF
Sbjct: 394 RLMEGNGLAADQY-------TYNVLIDALCKTGKVDEACSLFDGL---EYRGIRPNSVTF 443

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N VI  +C+ G  D A      M      PD YTY   ++ LCK     E +  +DEM  
Sbjct: 444 NTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQ 503

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
               P+ V + ++IN L      G A ++   M  +GC P+ VTY T +   C +G LD+
Sbjct: 504 KDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDE 563

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLG---RAVDGARVLMSMEERKFHVNEYI--- 369
           A +++  M   + + + + Y T+I+G   +G   RAV   + +  +     H   +I   
Sbjct: 564 AENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLR 623

Query: 370 ---------------------------------------------YSTLISGLFKEGKAE 384
                                                        Y +++ G  +E + +
Sbjct: 624 HLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLD 683

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +   L   M E+    N  +Y+AL++  C++    +A  +L  MI +G   N   Y  L+
Sbjct: 684 EVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLL 743

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G    G+  +A EI++         +E+ + V+I G    G       + + +    CK
Sbjct: 744 SGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCK 803

Query: 505 PDVVAYSSMIHGL 517
           P    Y+ +   L
Sbjct: 804 PSDETYAMLTEEL 816


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/540 (25%), Positives = 252/540 (46%), Gaps = 42/540 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + ++I  Y ++G F     +L R R +  +    ++  I    GK    ++A+R+F  M
Sbjct: 203 AYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEM 262

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      + ++N ++ ++ + G    A +  + +   K   + PN  T N++I  +C+
Sbjct: 263 KRD--AMPNLPTYNIIIGMLCKAGNVEAAFKVRDAM---KEAGLFPNVRTINIMIDRLCK 317

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD------------- 251
              +D A  +F  M  + C PD  T+C+L+DGL K+ R+D+A  + +             
Sbjct: 318 AQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVV 377

Query: 252 ----------------------EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
                                 EM   GC P  +  N  ++ + K GE  +   L + + 
Sbjct: 378 YTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIK 437

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            +G LP+  +Y+ LIH L   G   +   L   M    C+ +   Y T+I+G  K G+  
Sbjct: 438 ARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVN 497

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
              ++L  M+    H     Y +++ GL K  + ++A  L+++    G + N V+YS+LI
Sbjct: 498 KAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLI 557

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG  +VG+ DEA  ++ EM+  G   N +T++ L+ G  ++ + ++A+  ++ M    C 
Sbjct: 558 DGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCT 617

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N++ Y +LI+GLC+  K  +A + W +M  +G KP+ + Y++MI GL  +G+V +A  L
Sbjct: 618 PNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSL 677

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F           PD  +YN ++  L   +    +  L      +GC     TC   L AL
Sbjct: 678 FERFRA--SGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDAL 735



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 253/537 (47%), Gaps = 16/537 (2%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           D T+ S++     +        +  +M + ++V    ++  +   YG A   +EA  L  
Sbjct: 166 DVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLE 225

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
               +  C  +V ++N +L  + ++G   +AL  +  +      + +PN  T+N++I  +
Sbjct: 226 RQRAK-GCIPSVVAYNCILTCLGKKGKTDKALRIFEEM----KRDAMPNLPTYNIIIGML 280

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+ G V+ A ++   M      P++ T   ++D LCK  +LDEA  + + M    C P  
Sbjct: 281 CKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDG 340

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            TF  LI+GL K G +  A ++ + M     +PN V Y +LI         +    +   
Sbjct: 341 ATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKE 400

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+ S C P+ +   T ++ + K G    G  +   ++ R F  +   YS LI  L K G 
Sbjct: 401 MMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGF 460

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           A +  +L+  M ++GC  +T  Y+ +IDG C+ GK ++A ++L EM   G      TY S
Sbjct: 461 ARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGS 520

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G  +  +  +A  ++++   N    N+V YS LI G  + G++ EA +V  +M+ +G
Sbjct: 521 VVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKG 580

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P+V  ++ ++ GL  A  + EAL  F  M  L  K  P+  TY IL+N LCK    + 
Sbjct: 581 LTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDL--KCTPNQITYCILINGLCKVRKFNK 638

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +      M  +G  P+ +T    ++ L +     Q         A  LF+R R SGG
Sbjct: 639 AFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQ---------ASSLFERFRASGG 686



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/535 (27%), Positives = 252/535 (47%), Gaps = 27/535 (5%)

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           + LF+ M  E   +  V    +++ V  +EG    AL   + +   K      + + +N+
Sbjct: 81  LALFNQM-QELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEM---KSNTFDADIVLYNV 136

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
            I    ++G VD A + F EM      PD  TY ++M  LCK NRLDEAV + ++M+ + 
Sbjct: 137 CIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNR 196

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P    +N +I G    G+   A  L++    KGC+P+ V YN ++  L  KG  DKA+
Sbjct: 197 QVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKAL 256

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            + + M     MPN  TY  II  L K G      +V  +M+E     N    + +I  L
Sbjct: 257 RIFEEM-KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRL 315

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K  K ++A  +++ M  K C P+   + +LIDGL + G+ D+A  I   M++     N 
Sbjct: 316 CKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNV 375

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             Y+SL++ FF+  +     +++K+M ++ C  + +  +  +  + + G+  + R ++ +
Sbjct: 376 VVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEE 435

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP---DVFTYNILLNAL 554
           + +RG  PD  +YS +IH L  AG   E  +L+  M     K Q    D   YN +++  
Sbjct: 436 IKARGFLPDTRSYSILIHSLVKAGFARETYELYYAM-----KDQGCVLDTRAYNTVIDGF 490

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK--EKL--------EAPQDGTDF-- 602
           CK   ++ +  LL  M   G  P +VT    +  L   ++L        EA  +G +   
Sbjct: 491 CKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQ 550

Query: 603 --LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              + L     K  R    + ++E M+QK L+P   TW  ++  L + + I  A+
Sbjct: 551 VIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEAL 605



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 193/396 (48%), Gaps = 5/396 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +TF SLI      G       +  RM    ++     +  + + + K    E+  +++  
Sbjct: 341 ATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKE 400

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+    C   +   N+ ++ + + G   +    +  I   K    LP+T +++++I ++ 
Sbjct: 401 MMRS-GCSPDLMLLNTYMDCVFKAGETEKGRALFEEI---KARGFLPDTRSYSILIHSLV 456

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G      +L+  M  + C  D   Y T++DG CK  ++++A  LL+EM+  G  PT V
Sbjct: 457 KAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVV 516

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  +++GL K   L  A  L +     G   N+V Y++LI G    G +D+A  +++ M
Sbjct: 517 TYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEM 576

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +     PN  T+  +++GLVK     +      SM++ K   N+  Y  LI+GL K  K 
Sbjct: 577 MQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKF 636

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A   W++M ++G KPNT+ Y+A+I GL + G   +A  +      +G   ++ +Y+++
Sbjct: 637 NKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAM 696

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNC-VYNEVCYSVL 478
           ++G   + +   A +++++     C ++ + C ++L
Sbjct: 697 IEGLSIANRALDAYQLFEETRLKGCSIHTKTCVALL 732



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 190/407 (46%), Gaps = 4/407 (0%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  +    GK   V++A R++  M+D       V  + S++    +        + Y  
Sbjct: 342 TFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVV-VYTSLIRNFFKCDRKEDGHKMYKE 400

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++ +      P+ +  N  +  V + G  +    LF E+  R   PD  +Y  L+  L K
Sbjct: 401 MMRS---GCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVK 457

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
                E   L   M+  GC      +N +I+G CK+G++ +A +L++ M   G  P  VT
Sbjct: 458 AGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVT 517

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y +++ GL     LD+A  L +   ++    N+V Y ++I+G  K+GR  +   V+  M 
Sbjct: 518 YGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMM 577

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           ++    N Y ++ L+ GL K  +  +A+  ++ M +  C PN + Y  LI+GLC+V K +
Sbjct: 578 QKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFN 637

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A     EM   G   N  TY++++ G  +SG   +A  +++    +  + +   Y+ +I
Sbjct: 638 KAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMI 697

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
            GL    +  +A  ++ +   +GC        +++  L  A  +E+A
Sbjct: 698 EGLSIANRALDAYQLFEETRLKGCSIHTKTCVALLDALHKAECLEQA 744



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/372 (27%), Positives = 174/372 (46%), Gaps = 24/372 (6%)

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +++  M + G  P   T   L+        L +A  LL  M   K  P    Y T+I  L
Sbjct: 12  QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            ++G +     +   M+E  + VN ++ +TLI    +EG+ + A+ L  +M       + 
Sbjct: 72  SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V+Y+  ID   +VGK D A +   EM  NG   +  TY+S+M    ++ +  +AVEI++ 
Sbjct: 132 VLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +N  V     Y+ +I G    GK  EA  +  +  ++GC P VVAY+ ++  L   G 
Sbjct: 192 MEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGK 251

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
            ++AL++F EM   +  + P++ TYNI++  LCK  N+  +  + ++M + G  P++ T 
Sbjct: 252 TDKALRIFEEM---KRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTI 308

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           NI +                      RL K Q+      I E M  K  SP  +T+  ++
Sbjct: 309 NIMID---------------------RLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLI 347

Query: 643 QELCRPKRIQAA 654
             L +  R+  A
Sbjct: 348 DGLGKQGRVDDA 359



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 182/434 (41%), Gaps = 39/434 (8%)

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           Q+  EM +    P  YT   L+    K  +L EA  LL  M+     P    +  LI  L
Sbjct: 12  QILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGAL 71

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD----------- 321
            + GE  R   L + M   G   N     TLI     +G +D A+SLLD           
Sbjct: 72  SEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTFDADI 131

Query: 322 ------------------------RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
                                    M A+  +P++VTY +++  L K  R  +   +   
Sbjct: 132 VLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQ 191

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           ME+ +     Y Y+T+I G    GK ++A  L ++   KGC P+ V Y+ ++  L + GK
Sbjct: 192 MEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGK 251

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            D+A  I FE +      N  TY+ ++    ++G    A ++   M +     N    ++
Sbjct: 252 TDKALRI-FEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINI 310

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           +I  LC+  KL EA  ++  M  + C PD   + S+I GL   G V++A +++  M  L+
Sbjct: 311 MIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERM--LD 368

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               P+V  Y  L+    K         +   MM  GC PDL+  N ++  + +  E  +
Sbjct: 369 ADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGET-E 427

Query: 598 DGTDFLNELAIRLF 611
            G     E+  R F
Sbjct: 428 KGRALFEEIKARGF 441



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 89/203 (43%), Gaps = 4/203 (1%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           +L    + SLI  +   G      +V+  M ++       ++  +     KA  + EA+ 
Sbjct: 547 ELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALV 606

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            F +M D   C     ++  ++N + +   +++A  F+  +   +   + PNT+T+  +I
Sbjct: 607 CFQSMKD-LKCTPNQITYCILINGLCKVRKFNKAFVFWQEM---QKQGLKPNTITYTAMI 662

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             + + G V  A  LF         PD  +Y  +++GL   NR  +A  L +E ++ GC 
Sbjct: 663 SGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCS 722

Query: 260 PTPVTFNVLINGLCKNGELGRAA 282
               T   L++ L K   L +AA
Sbjct: 723 IHTKTCVALLDALHKAECLEQAA 745


>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 505

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/499 (27%), Positives = 247/499 (49%), Gaps = 9/499 (1%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
           +  ++ ++  M++++  +  + F  +   YG+A+++E+A++       E   + T  +++
Sbjct: 11  YDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKE-GGRPTAYTYS 69

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           S++ V ++ G     L  Y  ++ AK    +P+  TFN++I ++ +   V+ A  +F +M
Sbjct: 70  SMIQVFMKGGDVQNGLLMYKQMLKAK---FVPDHTTFNILIDSLAKADQVEEACNVFGDM 126

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
              N  PD+YTY  L+  L    R+D  + L + M   GC P   T++ +++     G +
Sbjct: 127 FKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRV 186

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
             A  +   M  KG  P+ VTYN LI      G L++A   + +   S+   NEVTY ++
Sbjct: 187 DEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGK---SRSFTNEVTYNSL 243

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           ++ L + G       +   M+ +    NE  Y+ LI  L   G+ ED  +L+ +M++   
Sbjct: 244 LSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDI 303

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
           K + V  + ++D L + G+ + A E+  +M   G  A+  TY+ L+ G   +GK   A  
Sbjct: 304 KYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGA 363

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +  +M +N C  N + Y+ LI    +   L  A  ++ +M  RG  P+VV+YSS+I G  
Sbjct: 364 LLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFG 423

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
            AG  + A+ LF EM        P+  TYN+L++ L +      +++ L  M D GC   
Sbjct: 424 KAGRTDAAISLFREMKA--EGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMG 481

Query: 579 LVTCNIFLTALKEKLEAPQ 597
            VT ++ +    + +E  Q
Sbjct: 482 KVTKSLLVRIPPQYMEEAQ 500



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 204/451 (45%), Gaps = 32/451 (7%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D+  +L   M     + D   + TL+    + N +++A+  L     +G  PT  T++ +
Sbjct: 12  DDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYSSM 71

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I    K G++     +   M     +P+  T+N LI  L     +++A ++   M     
Sbjct: 72  IQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNV 131

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+  TY  +I  L  +GR     ++  SM  +    N + Y +++      G+ ++A  
Sbjct: 132 SPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACD 191

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA-ANAFTYSSLMKGF 447
           +++QM++KG +P+ V Y+ LID   + G+ + A    F+ +    +  N  TY+SL+   
Sbjct: 192 IFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA----FDFVGKSRSFTNEVTYNSLLSSL 247

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
              G     +E++  M     V NE+ Y++LI  L   G++ +   ++ +M+    K D+
Sbjct: 248 GRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDI 307

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V  ++++  L  AG VE A +LF +M         D  TYNIL+N L +   +  +  LL
Sbjct: 308 VTINNVLDCLSKAGRVEAAFELFQDMKF--KGLNADTVTYNILINGLGRAGKLDAAGALL 365

Query: 568 NSMMDRGCDPDLVTCNIFLTALKE--KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
             M + GC P+++T N  +++  +   L A           A RLF   +  G       
Sbjct: 366 LEMEENGCAPNIITYNTLISSYGKWSNLSA-----------ATRLFLEMKERG------- 407

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                ++P   ++  +++   +  R  AAI+
Sbjct: 408 -----VAPNVVSYSSLIEGFGKAGRTDAAIS 433


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/530 (26%), Positives = 265/530 (50%), Gaps = 38/530 (7%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SL++  A+   F  +E+VL  M+ +      ++F  +  AY ++  ++ A++LFHT+ + 
Sbjct: 100 SLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREM 159

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH-MNILPNTLTFNLVIKTVCRLG 206
            +C  T  + N +LN +++ G    AL+ Y+ ++        + +  T ++++K +C LG
Sbjct: 160 HNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLG 219

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
            ++   +L +    + C P +  Y  ++DG CK+  L  A   L+E+++ G  PT  T+ 
Sbjct: 220 KIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYG 279

Query: 267 VLINGLCKNGE-----------------------------------LGRAAKLVDNMFLK 291
            LING CK GE                                   +  AA+++  M   
Sbjct: 280 ALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEM 339

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           GC P+  TYN +I+  C  G +++A  LL++      +PN+ +Y  +++   K G  V  
Sbjct: 340 GCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKA 399

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
           + +L  + E     +   Y   I G+   G+ + A+ + ++MMEKG  P+  +Y+ L+ G
Sbjct: 400 SGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSG 459

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC+ G+    + +L EM++     + + +++L+ GF  +G+  +A++I+K + +      
Sbjct: 460 LCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPG 519

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V Y+ +I G C+ GK+ +A     +M S    PD   YS++I G      +  ALK+F 
Sbjct: 520 IVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFG 579

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +M  ++ K +P+V TY  L+N  CK++++  +  + + M      P++VT
Sbjct: 580 QM--MKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVT 627



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 226/491 (46%), Gaps = 55/491 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +  +G+F++++ +L  M      +  K F  +  A  K  LV EA  +   M
Sbjct: 277 TYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRM 336

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E  C   + ++N ++N   + G    A E    +  AK   +LPN  ++  ++   C+
Sbjct: 337 A-EMGCGPDITTYNIMINFSCKGGRIEEADEL---LEKAKERGLLPNKFSYTPLMHAYCK 392

Query: 205 LG-LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
            G  V  +  LFR   +   + D+ +Y   + G+     +D A+++ ++M   G FP   
Sbjct: 393 KGDYVKASGMLFRIAEIGE-KSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQ 451

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            +N+L++GLCK G +     L+  M  +   P+   + TLI G    G LD+A+ +   +
Sbjct: 452 IYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVI 511

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +     P  V Y  +I G  K G+  D    L  M       +EY YST+I G  K+   
Sbjct: 512 IRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDM 571

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A+K++ QMM+   KPN + Y++LI+G C+      AE++   M +     N  TY++L
Sbjct: 572 SSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTL 631

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL--------------------- 482
           + GFF++GK  +A  I++ M  N C+ N+  +  LI+GL                     
Sbjct: 632 VGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERS 691

Query: 483 ----------------------------CEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
                                       C+ G +  A+++ T+ML++G   D V +++++
Sbjct: 692 LILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALL 751

Query: 515 HGLCNAGSVEE 525
           HGLC+ G  +E
Sbjct: 752 HGLCHKGKSKE 762



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 215/405 (53%), Gaps = 11/405 (2%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV+++ +++N   + G +    +    +  A+ +N+  N   FN VI    + GLV  A 
Sbjct: 274 TVETYGALINGFCKAGEFEAVDQLLTEMA-ARGLNM--NVKVFNNVIDAEYKYGLVTEAA 330

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           ++ R M    C PDI TY  +++  CK  R++EA  LL++ +  G  P   ++  L++  
Sbjct: 331 EMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAY 390

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK G+  +A+ ++  +   G   + V+Y   IHG+ + G +D A+ + ++M+     P+ 
Sbjct: 391 CKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDA 450

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y  +++GL K GR      +L  M +R    + Y+++TLI G  + G+ ++A+K++K 
Sbjct: 451 QIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKV 510

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           ++ KG  P  V Y+A+I G C+ GK  +A   L EM +   A + +TYS+++ G+ +   
Sbjct: 511 IIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHD 570

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A++++  M K+    N + Y+ LI+G C+   +  A  V++ M S    P+VV Y++
Sbjct: 571 MSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTT 630

Query: 513 MIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNAL 554
           ++ G   AG  E A  +F  ML   CL     P+  T++ L+N L
Sbjct: 631 LVGGFFKAGKPERATSIFELMLMNGCL-----PNDATFHYLINGL 670



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 171/357 (47%), Gaps = 29/357 (8%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A++L  + + + + +  V  F ++++  I+ G    A++ +  I+      + P  + +N
Sbjct: 468 AMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRK---GVDPGIVGYN 524

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +IK  C+ G + +A+    EM   +  PD YTY T++DG  K++ +  A+ +  +M   
Sbjct: 525 AMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKH 584

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P  +T+  LING CK  ++ RA K+   M     +PN VTY TL+ G    G  ++A
Sbjct: 585 KFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERA 644

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE--------- 367
            S+ + M+ + C+PN+ T+  +INGL       + A   + +EE+    NE         
Sbjct: 645 TSIFELMLMNGCLPNDATFHYLINGLT------NTATSPVLIEEKDSKENERSLILDFFT 698

Query: 368 -----------YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
                        Y+++I  L K G  + A  L  +M+ KG   ++V ++AL+ GLC  G
Sbjct: 699 MMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKG 758

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           K  E   I+   +N      A  YS  +  +   G+  +A  I + + +++   ++V
Sbjct: 759 KSKEWRNIISCDLNKIELQTAVKYSLTLDKYLYQGRLSEASVILQTLVEDSKFSDQV 815



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 126/261 (48%), Gaps = 19/261 (7%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           E ++  +   Y K H +  A+++F  M+ +   K  V ++ S++N   ++    RA + +
Sbjct: 555 EYTYSTVIDGYVKQHDMSSALKMFGQMM-KHKFKPNVITYTSLINGFCKKADMIRAEKVF 613

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           + +   K  +++PN +T+  ++    + G  + A  +F  M +  C P+  T+  L++GL
Sbjct: 614 SGM---KSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGL 670

Query: 238 C-----------KENRLDEAVLLLD---EMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
                       K+++ +E  L+LD    M +DG       +N +I  LCK+G +  A  
Sbjct: 671 TNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQL 730

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           L+  M  KG L + V +  L+HGLC KG   +  +++   +    +   V Y   ++  +
Sbjct: 731 LLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSLTLDKYL 790

Query: 344 KLGRAVDGARVLMSM-EERKF 363
             GR  + + +L ++ E+ KF
Sbjct: 791 YQGRLSEASVILQTLVEDSKF 811



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 1/112 (0%)

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           W      +C  + V +S L+  L       E  +V   M ++  KP   A+S++I     
Sbjct: 83  WASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAE 142

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +GS++ AL+LF+ +  +     P     N+LLN L K   +  ++ L + M+
Sbjct: 143 SGSLDRALQLFHTVREMH-NCFPTFVASNLLLNGLVKSGKVDVALQLYDKML 193


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 222/438 (50%), Gaps = 37/438 (8%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +T++  I  +CR+G V++A+   R +   N   ++Y Y  ++ GLCK+  LDEA+ +
Sbjct: 288 PTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKV 347

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL-- 307
           L+EM+  G  P   T+++LI+G CK G++ +   L++ M      P+ V+Y++L HGL  
Sbjct: 348 LEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCK 407

Query: 308 ---------------------------------CLKGNLDKAVSLLDRMVASKCMPNEVT 334
                                            C++G+LD A  L++ MV +   P+   
Sbjct: 408 KRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSN 467

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           + ++++G  K+G  V+       M E     +    + +I    +EG+ E+A+ L  +M 
Sbjct: 468 FESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQ 527

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            +G  PN   Y+A+I+ LC+  K + A E+   M+      +   YS+L+ GF +     
Sbjct: 528 TQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQ 587

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           KA+ ++  M K     + V Y++LI+ LC   ++ EA  ++ +M   G  PD ++Y+S+I
Sbjct: 588 KALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVI 647

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G C  G + +A  LFNEM  L+    P V TY  L++  CK + I  +  L++ M  +G
Sbjct: 648 AGFCRIGDMRKAWALFNEM--LQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKG 705

Query: 575 CDPDLVTCNIFLTALKEK 592
             PD+VT N+ + A + +
Sbjct: 706 ITPDVVTYNVLIAAHRRR 723



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 233/475 (49%), Gaps = 40/475 (8%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV ++++ +  + + G    AL+F   +++A   N L N   +N +I  +C+ G +D A+
Sbjct: 289 TVVTYSTYIYGLCRVGYVESALDFVRSLISA---NGLVNVYCYNAIIHGLCKKGELDEAL 345

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           ++  EM      PD+YTY  L+ G CK+  +++ + L++EM+     P+ V+++ L +GL
Sbjct: 346 KVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGL 405

Query: 273 CK-----------------------------------NGELGRAAKLVDNMFLKGCLPNE 297
           CK                                    G+L  A KL++ M      P+ 
Sbjct: 406 CKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDP 465

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
             + +L+HG C  G    A+   + M+    +P+  T   II+   + GR  +   ++  
Sbjct: 466 SNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNE 525

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M+ +    N + Y+ +I+ L KE K+E A++L+  M+++   P+ VVYS LIDG  +   
Sbjct: 526 MQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSN 585

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             +A  +   M+  G   +   Y+ L+       +  +A  ++K M +N    +++ Y+ 
Sbjct: 586 SQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTS 645

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           +I G C  G +R+A  ++ +ML RG  P VV Y+S++ G C    ++ A  L +EM    
Sbjct: 646 VIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEM--KR 703

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
               PDV TYN+L+ A  ++ N+  ++++LN M + G  PD +T  +    LK K
Sbjct: 704 KGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMMLEWLLKAK 758



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 153/605 (25%), Positives = 274/605 (45%), Gaps = 84/605 (13%)

Query: 108 RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE 167
           R R  ++ VL    + +FK+      V   I+ F T + ++   R++ +F +V+NV+   
Sbjct: 81  RSRIHRKHVLSPVVVKVFKSLNWE--VARHIK-FSTTMKKYGFSRSIDAFRTVVNVLALA 137

Query: 168 GLYH------RALEFYNHIVNAKHMNILP-----------NTLTFNLVIKTVCRLGLVDN 210
           G++       R +  Y + VN     + P           + + F+L+IK      +++N
Sbjct: 138 GMHMEVYALLRDIVCYYNKVNLDAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLEN 197

Query: 211 AIQLFR-------EMPVRNCE----------------------------PDIYTYCTLMD 235
           A+ +F        E+  R+C                             P+++TY  +M+
Sbjct: 198 AVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMN 257

Query: 236 GLCKEN----RLD--EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
             CK N     +D  +A  +L+EM+ +G  PT VT++  I GLC+ G +  A   V ++ 
Sbjct: 258 FYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLI 317

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
               L N   YN +IHGLC KG LD+A+ +L+ M +    P+  TY  +I+G  K G   
Sbjct: 318 SANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVE 377

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
            G  ++  M+      +   YS+L  GL K+  ++ ++ +++ +   G K +   YS LI
Sbjct: 378 KGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILI 437

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            G C  G  D A +++ EM+ N  A +   + SL+ GF + G    A+E +  M +   +
Sbjct: 438 KGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGIL 497

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +    +V+I   C +G++ EA  +  +M ++G  P++  Y+++I+ LC     E AL+L
Sbjct: 498 PSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALEL 557

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F   L L+    P V  Y+ L++   KQSN   ++ L   M+  G  PD+V   I +  L
Sbjct: 558 FP--LMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINIL 615

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                                  R R    + + + M +  ++P   ++  V+   CR  
Sbjct: 616 CH---------------------RSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIG 654

Query: 650 RIQAA 654
            ++ A
Sbjct: 655 DMRKA 659



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 22/304 (7%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR--VGKPD----EAEEILF 426
           L+  L +  + E    L+++M   G  PN   Y+ +++  C+   G+ D    +A EIL 
Sbjct: 220 LLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILE 279

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM  NG +    TYS+ + G    G    A++  + +   N + N  CY+ +IHGLC+ G
Sbjct: 280 EMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKG 339

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           +L EA  V  +M S G  PDV  YS +IHG C  G VE+ L L  EM       +P + +
Sbjct: 340 ELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMK--YSNMEPSLVS 397

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFL- 603
           Y+ L + LCK+     S+D+   +   G   D    +I +    ++  L++     + + 
Sbjct: 398 YSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMV 457

Query: 604 -NELAIRLFKRQRTSGGF----------KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
            N LA      +    GF          +   +ML+  + P  +T   ++   CR  R++
Sbjct: 458 RNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVE 517

Query: 653 AAIN 656
            A+N
Sbjct: 518 EALN 521


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 241/510 (47%), Gaps = 7/510 (1%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           Y    S    +I     S  F S  ++ Y    E      + +  I  AY ++  ++ +I
Sbjct: 55  YSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSI 114

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
             F+ MVD+     +   FN++L  ++    +++   F+N       + ++ +  +F +V
Sbjct: 115 YYFNEMVDKGFVPGS-NCFNNLLTFVVGSSSFNQWWCFFNE----SKIKVVLDVYSFGIV 169

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           IK  C  G ++ +  L  E+      P++  Y TL+DG CK+  +++A  L  EM   G 
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGL 229

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
                T+ VLI+GL KNG   +  ++ + M   G  PN  TYN +++ LC  G    A  
Sbjct: 230 VANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFK 289

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           + D M       N VTY T+I GL +  +A +   V+  M+    + N   Y+TLI G  
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFC 349

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
              K   A+ L + +  +G  P+ V Y+ L+ G C+ G    A +++ EM   G   +  
Sbjct: 350 GVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKV 409

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TY+ L+  F  S    KA+++   M +     +   YSVLIHG C  G++ EA  ++  M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSM 469

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           + +  +P+ V Y++M+ G C  GS   AL+LF EM   E +  P+V +Y  ++  LCK+ 
Sbjct: 470 VEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREM--EEKELPPNVASYRYMIEVLCKER 527

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
               +  L+  M+D G  P     N+   A
Sbjct: 528 KSKEAEGLVEKMIDSGIGPSDSILNLISRA 557



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 173/356 (48%), Gaps = 24/356 (6%)

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y  +I+      +LD ++   + MV    +P    +  ++  +V    + +      +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVG-SSSFNQWWCFFNES 155

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           + K  ++ Y +  +I G  + G+ E +  L  ++ E G  PN V+Y+ LIDG C+ G+ +
Sbjct: 156 KIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A+++ FEM   G  AN +TY+ L+ G F++G   +  E+++ M ++    N   Y+ ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           + LC+DG+ ++A  V+ +M  RG   ++V Y+++I GLC      EA ++ ++M      
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMK--SDG 333

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
             P++ TYN L++  C    +  ++ L   +  RG  P LVT NI ++            
Sbjct: 334 INPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGF---------- 383

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                       K+  TSG  K+V+ M ++ + P   T+  ++    R   ++ AI
Sbjct: 384 -----------CKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428



 Score = 68.9 bits (167), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/256 (21%), Positives = 108/256 (42%), Gaps = 24/256 (9%)

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
           K  + +Y  +I+   +    D +     EM++ G    +  +++L+  F           
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLT-FVVGSSSFNQWW 149

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
            + + +K   V +   + ++I G CE G++ ++  +  ++   G  P+VV Y+++I G C
Sbjct: 150 CFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             G +E+A  LF EM      +    +TY +L++ L K        ++   M + G  P+
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANE--WTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPN 267

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
           L T N  +                      +L K  RT   FK+ + M ++ +S    T+
Sbjct: 268 LHTYNCVMN---------------------QLCKDGRTKDAFKVFDEMRERGVSCNIVTY 306

Query: 639 ERVVQELCRPKRIQAA 654
             ++  LCR  +   A
Sbjct: 307 NTLIGGLCREMKANEA 322



 Score = 56.2 bits (134), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 104/249 (41%), Gaps = 32/249 (12%)

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A+ +L ++I+    +  FT SSL+    ES       E  K  ++         Y V+I+
Sbjct: 58  AQSLLLQVISGKIQSQFFTSSSLLHYLTES-------ETSKTKSR--------LYEVIIN 102

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
              +   L  +   + +M+ +G  P    +++++  +  + S  +    FNE    + K 
Sbjct: 103 AYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNES---KIKV 159

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
             DV+++ I++   C+   I  S DLL  + + G  P++V     +    +K E  +   
Sbjct: 160 VLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219

Query: 601 DFL---------NE-----LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
            F          NE     L   LFK      GF++ E M +  + P   T+  V+ +LC
Sbjct: 220 LFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLC 279

Query: 647 RPKRIQAAI 655
           +  R + A 
Sbjct: 280 KDGRTKDAF 288


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 216/408 (52%), Gaps = 5/408 (1%)

Query: 167 EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
           +G  H+AL F++ ++    M    + +++  +I  +C++G    A++L R    +  +PD
Sbjct: 276 KGQIHQALHFHDKVIA---MGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPD 332

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
           +  Y T++DG+CK+  +++A  L  E      FP   T+N LI+G C  G+L  A  L +
Sbjct: 333 VVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFN 392

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M  K  +P+  T++ L+ G C  GN+ +A ++L  M+     P+ VTY ++++G   + 
Sbjct: 393 KMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVN 452

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
                  +  +M  R    N   Y+ +I+G  K    ++AMKL+K+M  K   P+ + YS
Sbjct: 453 EVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYS 512

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           +LIDGLC+ G+   A E++ EM   G   +  TY+S++    +     KA+ +   +   
Sbjct: 513 SLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQ 572

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               +   Y++L+ GLC+ GKL +AR V+  +L +G   DV AY+ MI G C+ G  +EA
Sbjct: 573 GIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEA 632

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           L L ++M   E    PD  TY I++ +L ++     +  LL  M+ RG
Sbjct: 633 LALLSKM--EENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 205/420 (48%), Gaps = 3/420 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T+T    IK  C  G +  A+    ++       D  +Y TL++GLCK      A+ L
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L         P  V +N +I+G+CK+  +  A  L      K   P+  TYN LI G C+
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L  A+ L ++M +   +P+  T+  +++G  K G   +   VL  M ++    +   
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS+L+ G     +   A  ++  M  +G   N   Y+ +I+G C++   DEA ++  EM 
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +     +  TYSSL+ G  +SG+   A+E+  +M       + + Y+ ++  LC+   + 
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  + T++  +G +PD+  Y+ ++ GLC +G +E+A K+F ++L        DV+ Y +
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLV--KGYNLDVYAYTV 618

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           ++   C +     ++ LL+ M + GC PD  T  I + +L EK E        L E+ +R
Sbjct: 619 MIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDM-AEKLLREMIMR 677



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/387 (28%), Positives = 199/387 (51%), Gaps = 5/387 (1%)

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
           FH  +   S+ +++N + + G    ALE      N   + + P+ + +N +I  +C+   
Sbjct: 294 FHLDQV--SYGTLINGLCKVGETKAALELLRR--NDGKL-VQPDVVMYNTIIDGMCKDKH 348

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V++A  L+ E   +   PD++TY  L+ G C   +L +A+ L ++M      P   TF++
Sbjct: 349 VNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSI 408

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L++G CK+G +  A  ++  M  +   P+ VTY++L+ G CL   ++KA S+ + M    
Sbjct: 409 LVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRG 468

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
              N  +Y  +ING  K+    +  ++   M  ++   +   YS+LI GL K G+   A+
Sbjct: 469 VTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYAL 528

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           +L  +M  +G +P+ + Y++++D LC+    D+A  +L ++   G   +  TY+ L+KG 
Sbjct: 529 ELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGL 588

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            +SGK   A ++++D+       +   Y+V+I G C+ G   EA  + ++M   GC PD 
Sbjct: 589 CQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDA 648

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEML 534
             Y  +I  L      + A KL  EM+
Sbjct: 649 KTYEIIILSLFEKDENDMAEKLLREMI 675



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 186/349 (53%), Gaps = 3/349 (0%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V  +N++++ + ++   + A + Y+  V+ +   I P+  T+N +I   C +G + +AI 
Sbjct: 333 VVMYNTIIDGMCKDKHVNDAFDLYSEKVSKR---IFPDVFTYNALISGFCIVGKLKDAID 389

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           LF +M  +N  PD+YT+  L+DG CK+  + EA  +L  M      P  VT++ L++G C
Sbjct: 390 LFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYC 449

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
              E+ +A  + + M  +G   N  +YN +I+G C    +D+A+ L   M   +  P+ +
Sbjct: 450 LVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVI 509

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY ++I+GL K GR      ++  M  R    +   Y++++  L K+   + A+ L  ++
Sbjct: 510 TYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKL 569

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             +G +P+   Y+ L+ GLC+ GK ++A ++  +++  G   + + Y+ +++GF + G  
Sbjct: 570 KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
            +A+ +   M +N C+ +   Y ++I  L E  +   A  +  +M+ RG
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 124/258 (48%), Gaps = 39/258 (15%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  Y    +    E +   M         +S+  +   + K  +V+EA++LF  M
Sbjct: 440 TYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEM 499

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                                                   H  I P+ +T++ +I  +C+
Sbjct: 500 ---------------------------------------HHKQIFPDVITYSSLIDGLCK 520

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A++L  EM  R  +PDI TY +++D LCK++ +D+A+ LL +++  G  P   T
Sbjct: 521 SGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNT 580

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           + +L+ GLC++G+L  A K+ +++ +KG   +   Y  +I G C KG  D+A++LL +M 
Sbjct: 581 YTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKME 640

Query: 325 ASKCMPNEVTYGTIINGL 342
            + C+P+  TY  II  L
Sbjct: 641 ENGCIPDAKTYEIIILSL 658


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 243/482 (50%), Gaps = 6/482 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y  +GD  + +  L  +          ++      Y +A ++  A R+F  +
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF-VL 132

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C RT  ++ ++L+ ++  G+   A+  +   V  +  +  P+T  +  ++  +C 
Sbjct: 133 MPLRGCLRTAFTYTALLHGLLGAGMVREAMTVF---VGMRADSCAPDTHVYATMVHGLCE 189

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G  + A  L  E      EP+I  Y  L+DG C    ++ A+ + + M  + C P   T
Sbjct: 190 AGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRT 249

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+GLCK+G++ RA  L   M   G  PN VTY  LI G C +G+L  A  LL  M 
Sbjct: 250 YTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLME 309

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +  +PN+ T+  +I+ L K  +  +    L S+ ++   VNE +Y++LI GL K GK +
Sbjct: 310 TNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKID 369

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A +L ++M+ +G  P+   YS+LIDGLCR  K  +A  +L +M+  G  A+  TY+ ++
Sbjct: 370 AADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIII 429

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
                        +I+  M       + V Y+V +   CE+G++ +A  +  QM+ RG  
Sbjct: 430 DELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVF 489

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P++V Y+++I G  N G V +A   F  M+    K   D  +Y +LL  + K+S+  +S+
Sbjct: 490 PNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNED--SYTVLLRLVVKKSSSDNSV 547

Query: 565 DL 566
           D+
Sbjct: 548 DI 549



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 233/476 (48%), Gaps = 40/476 (8%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R ++++ +++N     G    A +   H+ +  H  + P++  +   +   CR G++ +A
Sbjct: 70  RNLRTYTTLINAYCLAGDIPAAKQ---HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHA 126

Query: 212 IQLFREMPVR-----------------------------------NCEPDIYTYCTLMDG 236
            ++F  MP+R                                   +C PD + Y T++ G
Sbjct: 127 CRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHG 186

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC+  R +EA +LL+E   +G  P  V +N LI+G C  GE+  A K+ + M    C PN
Sbjct: 187 LCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPN 246

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             TY  LIHGLC  G +++A+ L  RMV +   PN VTY  +I G    G      R+L 
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            ME      N++ +S LI  L K  K E+A      +++KG K N VVY++LIDGLC+ G
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K D A+E++ +MI+ G   +A +YSSL+ G     K  +A  + +DM +     + V Y+
Sbjct: 367 KIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           ++I  L  +      + ++ +M++ G  PD+V Y+  +   C  G +E+A  +  +M  +
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM--V 484

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +    P++ TYN L+        +S +      M+ +G  P+  +  + L  + +K
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 178/369 (48%), Gaps = 12/369 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  T+  +I  +C+ G V+ A+ LF  M     EP++ TY  L+ G C E  L  A  L
Sbjct: 245 PNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRL 304

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M+ +G  P   TF+VLI+ LCK  ++  A   + ++  KG   NEV Y +LI GLC 
Sbjct: 305 LHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCK 364

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G +D A  L+ +M++   +P+  +Y ++I+GL +  +      +L  M E+    +   
Sbjct: 365 TGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVT 424

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ +I  L +E  +E   K++ +M+  G  P+ V Y+  +   C  G+ ++AE ++ +M+
Sbjct: 425 YTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED---- 485
           + G   N  TY++L++G+   G   +A   ++ M       NE  Y+VL+  + +     
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSD 544

Query: 486 --------GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
                     +++ +++   +  R        YS  I  LC    +EEA   F  M    
Sbjct: 545 NSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNAN 604

Query: 538 PKSQPDVFT 546
                DV+T
Sbjct: 605 LTPSEDVYT 613



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 193/403 (47%), Gaps = 16/403 (3%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y  A  +E A+++F  M D   C   V+++  +++ + + G   RA+  ++ +V A
Sbjct: 218 LIDGYCNAGEMEHALKVFEGM-DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               + PN +T+  +I+  C  G +  A +L   M      P+ +T+  L+D LCK  ++
Sbjct: 277 ---GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA L L  +   G     V +  LI+GLCK G++  A +L+  M  +G +P+  +Y++L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I GLC +  L +A  +L+ M+      + VTY  II+ LV+   +    ++   M     
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
           + +   Y+  +    +EG+ EDA  +  QM+++G  PN V Y+ LI G   +G   +A  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK--DMAKNNCVYNEVC------- 474
               M+  G   N  +Y+ L++   +      +V+IWK  DM     +  ++        
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 475 ---YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
              YS  I  LC   +L EA+  +  M +    P    Y+S+I
Sbjct: 574 ADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSII 616



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 89/407 (21%), Positives = 163/407 (40%), Gaps = 86/407 (21%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +LI  Y N+G+ +    V   M   +     +++  +     K+  VE A+ LF  MV
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR- 204
            E   +  V ++ +++     EG    A     H++      ++PN  TF+++I  +C+ 
Sbjct: 275 -EAGLEPNVVTYTALIQGQCNEGHLQCAFRLL-HLMETN--GLVPNDWTFSVLIDALCKR 330

Query: 205 ----------------------------------LGLVDNAIQLFREMPVRNCEPDIYTY 230
                                              G +D A +L ++M      PD ++Y
Sbjct: 331 EKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSY 390

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +L+DGLC++ +L +A L+L++M   G   +PVT+ ++I+ L +        K+ D M  
Sbjct: 391 SSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            G  P+ VTY   +   C +G ++ A S++ +MV     PN VTY T+I G   LG    
Sbjct: 451 TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQ 510

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK------------------- 391
                  M  + +  NE  Y+ L+  + K+  +++++ +WK                   
Sbjct: 511 AFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQL 570

Query: 392 ----------------------------QMMEKGCKPNTVVYSALID 410
                                        M      P+  VY+++ID
Sbjct: 571 PLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIID 617



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 28/222 (12%)

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           H+     + +A      N   Y+ LI+  C  G +  A+   T +L  G  PD  AY+S 
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 514 IHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + G C AG +  A ++F  M    CL        FTY  LL+ L     +  ++ +   M
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLR-----TAFTYTALLHGLLGAGMVREAMTVFVGM 168

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQ-------------DGTD----FLNELAIRLFKR 613
               C PD    +++ T +    EA +             +G +      N L       
Sbjct: 169 RADSCAPD---THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  K+ E M     SP   T+  ++  LC+  +++ A+
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 147/552 (26%), Positives = 264/552 (47%), Gaps = 51/552 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++A+ LF+ ++   +       FN +L  +++   YH  L     +   +   I PN +
Sbjct: 66  VDDAVSLFNRLLRR-NTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM---EFRGIKPNLV 121

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
             N++I   C+LGL+  A  +F ++      PD  T+ TL+ GLC + ++ +A L  D++
Sbjct: 122 NCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKV 181

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G     +++  LI+GLCK GE   A  L+  +      PN V YNT+I  +C    +
Sbjct: 182 VALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLV 241

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           ++A  L   M++    P+ VTY  +I+G   LG+  D   +   M       + Y ++ L
Sbjct: 242 NEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNIL 301

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ++   K+GK ++   ++  MM++G KPN V Y++L+DG C V + ++A+ I   M   G 
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  +YS ++ GF +  K  +A+ ++K+M + N + + V YS LI GL + G++  A  
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  QM  RG  P +  Y+S++  LC    V++A+ L  ++   +   QP+++TY+IL+  
Sbjct: 422 LVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL--KDKGIQPNMYTYSILIKG 479

Query: 554 LCKQSNI-----------------------------------SHSIDLLNSMMDRGCDPD 578
           LC+   +                                   + ++ LL+ M D GC PD
Sbjct: 480 LCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPD 539

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG-GFKIVEVMLQKFLSPQTST 637
             T  I + +L +K E         N++A +L +     G   + + +  QK      S+
Sbjct: 540 AKTYEIIILSLFKKDE---------NDMAEKLLREMIARGVRPRQIAIWFQKKKEYDVSS 590

Query: 638 WERVVQELCRPK 649
             + + E   PK
Sbjct: 591 EPKTLTEQSVPK 602



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 212/441 (48%), Gaps = 23/441 (5%)

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           F  +P  + + +  +Y +        N +D+AV L + +      P    FN ++  L K
Sbjct: 38  FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVK 97

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
           +        L   M  +G  PN V  N LI+  C  G +  A S+  +++    +P+ +T
Sbjct: 98  SKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTIT 157

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           + T+I GL   G+          +    FH ++  Y TLI GL K G+   A+ L +++ 
Sbjct: 158 FTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVD 217

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
               +PN V+Y+ +ID +C+V   +EA ++  EMI+ G + +  TYS+L+ GF   GK +
Sbjct: 218 GNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLN 277

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A++++  M   N   +   +++L++  C+DGK++E + V+  M+ +G KP+ V Y+S++
Sbjct: 278 DAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM 337

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G C    V +A  +FN M   +    PD+ +Y+I++N  CK      +++L   M  + 
Sbjct: 338 DGYCLVKEVNKAKSIFNTM--AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             PD+VT +  +  L                      K  R S   ++V+ M  + + P 
Sbjct: 396 IIPDVVTYSSLIDGLS---------------------KSGRISYALQLVDQMHDRGVPPT 434

Query: 635 TSTWERVVQELCRPKRIQAAI 655
             T+  ++  LC+  ++  AI
Sbjct: 435 IRTYNSILDALCKIHQVDKAI 455



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/361 (25%), Positives = 173/361 (47%), Gaps = 23/361 (6%)

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N ++Y++         ++D AVSL +R++     P    +  I+  LVK         + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             ME R    N    + LI+   + G    A  ++ ++++ G  P+T+ ++ LI GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G+  +A     +++  G   +  +Y +L+ G  + G+   A+++ + +  N    N V Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + +I  +C+   + EA  ++++M+S+G  PDVV YS++I G C  G + +A+ LFN+M+ 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
              K  PDV+T+NIL+NA CK   +     + + MM +G  P+ VT N  +         
Sbjct: 289 ENIK--PDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLM--------- 337

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             DG   + E+          +    I   M Q  ++P   ++  ++   C+ K+   A+
Sbjct: 338 --DGYCLVKEV----------NKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAM 385

Query: 656 N 656
           N
Sbjct: 386 N 386


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 211/402 (52%), Gaps = 8/402 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  ++N+VI  + R G   +A+++F EM  R   P+  TY T++DG  K   L+    L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M   G  P  +T+NVL++GLC+ G +G  + L+D M  +  +P+  TY+ L  GL  
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+    +SL  + + +     + T   ++NGL K G+      VL S+          I
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  + G+ E A   + QM  +  KP+ + Y+ALI+GLC+  +   A+++L EM 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +NG      T+++L+  +  +G+  K   +  +M +N    N V Y  +++  C++GK+ 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFT 546
           EA  +   M  +   P+   Y+++I      G  ++A  L  +M     KS    P + T
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM-----KSNGISPSIVT 367

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           YN+L+  LC QS IS + +++NS+ +    PD V+ N  ++A
Sbjct: 368 YNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISA 409



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 226/469 (48%), Gaps = 6/469 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +     +A    +A+ +F  M +       + ++N++++  I+ G         + 
Sbjct: 17  SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHI-TYNTMIDGHIKGGDLEAGFRLRDQ 75

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V      + PN +T+N+++  +CR G +     L  EM  +   PD +TY  L DGL +
Sbjct: 76  MV---CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
                  + L  +   +G      T ++L+NGLCK+G++  A +++ ++   G +P  V 
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTLI+G C  G L+ A S   +M +    P+ +TY  +INGL K  R  +   +LM M+
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +   +     ++TLI    + G+ E    +  +M E G KPN V Y ++++  C+ GK  
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA  IL +M +     NA  Y++++  + E G   +A  + + M  N    + V Y++LI
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GLC   ++ EA  +   + +    PD V+Y+++I   C  G++++AL L   M     K
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           S   V TY+ L++ L     ++    L   MM     P     NI + A
Sbjct: 433 ST--VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEA 479



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 209/434 (48%), Gaps = 5/434 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+N V+  + + G    A+E ++ +       +LPN +T+N +I    + G ++   +L 
Sbjct: 17  SYNVVIAGMWRAGRGGDAVEVFDEMTERA---VLPNHITYNTMIDGHIKGGDLEAGFRLR 73

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M     +P+  TY  L+ GLC+  R+ E   LLDEM      P   T+++L +GL +N
Sbjct: 74  DQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRN 133

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+      L       G    + T + L++GLC  G +  A  +L  +V +  +P  V Y
Sbjct: 134 GDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIY 193

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+ING  + G           M+ R    +   Y+ LI+GL K  +  +A  L  +M +
Sbjct: 194 NTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD 253

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G  P    ++ LID   R G+ ++   +L EM  NG   N  +Y S++  F ++GK  +
Sbjct: 254 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPE 313

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           AV I  DM   + + N   Y+ +I    E G   +A ++  +M S G  P +V Y+ +I 
Sbjct: 314 AVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIK 373

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLCN   + EA ++ N +     +  PD  +YN L++A C + NI  ++DL   M   G 
Sbjct: 374 GLCNQSQISEAEEIINSL--SNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431

Query: 576 DPDLVTCNIFLTAL 589
              + T +  ++ L
Sbjct: 432 KSTVRTYHQLISGL 445



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 196/407 (48%), Gaps = 24/407 (5%)

Query: 249 LLDEMQVDGCFP-TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           +L  M  DG  P    ++NV+I G+ + G  G A ++ D M  +  LPN +TYNT+I G 
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
              G+L+    L D+MV     PN +TY  +++GL + GR  + + +L  M  +K   + 
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 120

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + YS L  GL + G ++  + L+ + ++ G        S L++GLC+ GK   AEE+L  
Sbjct: 121 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           ++N G       Y++L+ G+ ++G+   A   +  M   +   + + Y+ LI+GLC+  +
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A+ +  +M   G  P V  ++++I      G +E+   + +EM   E   +P+V +Y
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ--ENGLKPNVVSY 298

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
             ++NA CK   I  ++ +L+ M  +   P+    N  + A  E    P D         
Sbjct: 299 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE--HGPNDQA------- 349

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                       F +VE M    +SP   T+  +++ LC   +I  A
Sbjct: 350 ------------FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 384



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 172/375 (45%), Gaps = 38/375 (10%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +LN + ++G    A E    +VNA    ++P  + +N +I   C+ G ++ A   F +M 
Sbjct: 161 LLNGLCKDGKVSIAEEVLQSLVNA---GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 217

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
            R+ +PD  TY  L++GLCK  R+  A  LL EMQ +G  PT  TFN LI+   + G+L 
Sbjct: 218 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 277

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           +   ++  M   G  PN V+Y ++++  C  G + +AV++LD M     +PN   Y  II
Sbjct: 278 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 337

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +  V                                   + G  + A  L ++M   G  
Sbjct: 338 DAYV-----------------------------------EHGPNDQAFILVEKMKSNGIS 362

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+ V Y+ LI GLC   +  EAEEI+  + N+    +A +Y++L+      G   KA+++
Sbjct: 363 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 422

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            + M K         Y  LI GL   G+L E   ++ +M+     P    ++ M+     
Sbjct: 423 QQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 482

Query: 520 AGSVEEALKLFNEML 534
            G+  +A  L  EML
Sbjct: 483 YGNEIKAEDLRKEML 497



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 4/278 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI     +    + + +L  M+        ++F  +  AYG+   +E+   +   M
Sbjct: 227 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 286

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E   K  V S+ S++N   + G    A+   + +    H ++LPN   +N +I     
Sbjct: 287 -QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF---HKDVLPNAQVYNAIIDAYVE 342

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G  D A  L  +M      P I TY  L+ GLC ++++ EA  +++ +      P  V+
Sbjct: 343 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 402

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+  C  G + +A  L   M   G      TY+ LI GL   G L++   L  +M+
Sbjct: 403 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 462

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
            +  +P+   +  ++    K G  +    +   M +++
Sbjct: 463 QNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 500


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 249/498 (50%), Gaps = 48/498 (9%)

Query: 100 KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNS 159
           +S   +L+R+ +  R  L + F   FK  G A +                 KR+V ++N 
Sbjct: 22  RSCNALLHRLSKVGRGDLSRKF---FKDMGAAGI-----------------KRSVFTYNI 61

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +++ + +EG    A   +  +   K     P+ +T+N +I    +LGL+D  I +F +M 
Sbjct: 62  MIDYLCKEGDLEMARSLFTQM---KEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMK 118

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
             +C+PD+ TY  L++  CK  R+ +A   L EM+ +G  P  VT++  I+  CK G L 
Sbjct: 119 DADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQ 178

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A K   +M      PNE TY +LI   C  GNL +A+ L++ ++ +    N VTY  ++
Sbjct: 179 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALL 238

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +GL + GR  +   V  +M       N+  Y+ L+ G  K  + E A  + K+M EK  K
Sbjct: 239 DGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIK 298

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+ ++Y  ++ GLC   + +EA+ ++ E+  +G   NA  Y++LM  +F+SG+  +A+ +
Sbjct: 299 PDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTL 358

Query: 460 WKDM-------AKNNC----------------VYNEVCYSVLIHGLCEDGKLREARMVWT 496
            ++M        KNNC                + +++ Y+ LI G  + G L+EA  +  
Sbjct: 359 LEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRD 418

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M+  G + D+ AY+++I GL ++G V++A  L +EM  +     PD   Y  L+     
Sbjct: 419 RMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEM--IGKGVLPDEVVYMCLIKKYYA 476

Query: 557 QSNISHSIDLLNSMMDRG 574
              +  +++L N M  RG
Sbjct: 477 LGKVDEALELQNEMAKRG 494



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 210/418 (50%), Gaps = 23/418 (5%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +   + P   + N ++  + ++G  D + + F++M     +  ++TY  ++D LCKE  L
Sbjct: 13  RKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDL 72

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           + A  L  +M+  G  P  VT+N LI+G  K G L     + + M    C P+ +TYN L
Sbjct: 73  EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNAL 132

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I+  C    + KA   L  M A+   PN VTY T I+   K G   +  +  + M     
Sbjct: 133 INCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVAL 192

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             NE+ Y++LI    K G   +A+KL +++++ G K N V Y+AL+DGLC  G+  EAEE
Sbjct: 193 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 252

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE-VCYSVLIHGL 482
           +   M+N G A N  TY++L+ GF ++ +   A +I K+M K  C+  + + Y  ++ GL
Sbjct: 253 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM-KEKCIKPDLLLYGTILWGL 311

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML-------- 534
           C + +L EA+++  ++   G   + V Y++++     +G   EAL L  EML        
Sbjct: 312 CNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVDGLCK 371

Query: 535 --CLEPKSQ-----------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
             C E   +           PD   Y  L++   K  N+  +++L + M++ G + DL
Sbjct: 372 NNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDL 429



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 224/449 (49%), Gaps = 16/449 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I +    GD +    +  +M+         ++  +   +GK  L++E I +F  M
Sbjct: 58  TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 117

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   C   V ++N+++N   +     +A EF + +   K   + PN +T++  I   C+
Sbjct: 118 KDA-DCDPDVITYNALINCFCKFERMPKAFEFLHEM---KANGLKPNVVTYSTFIDAFCK 173

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G++  AI+ F +M      P+ +TY +L+D  CK   L EA+ L++E+   G     VT
Sbjct: 174 EGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVT 233

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L++GLC+ G +  A ++   M   G  PN+ TY  L+HG      ++ A  +L  M 
Sbjct: 234 YTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK 293

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ + YGTI+ GL    R  +   ++  ++E   + N  IY+TL+   FK G+A 
Sbjct: 294 EKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQAT 353

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A+ L ++M++            L+DGLC+    + A+++  EM++ G   +   Y++L+
Sbjct: 354 EALTLLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 401

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G  + G   +A+ +   M +     +   Y+ LI GL   G++++AR +  +M+ +G  
Sbjct: 402 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL 461

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           PD V Y  +I      G V+EAL+L NEM
Sbjct: 462 PDEVVYMCLIKKYYALGKVDEALELQNEM 490



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 178/366 (48%), Gaps = 2/366 (0%)

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
           +++ A + F +M      P   +   L+  L K  R D +     +M   G   +  T+N
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           ++I+ LCK G+L  A  L   M   G  P+ VTYN+LI G    G LD+ + + ++M  +
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
            C P+ +TY  +IN   K  R       L  M+      N   YST I    KEG  ++A
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           +K +  M      PN   Y++LID  C+ G   EA +++ E++  G   N  TY++L+ G
Sbjct: 181 IKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDG 240

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             E G+  +A E+++ M       N+  Y+ L+HG  +  ++  A+ +  +M  +  KPD
Sbjct: 241 LCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPD 300

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           ++ Y +++ GLCN   +EEA  L  E+   E     +   Y  L++A  K    + ++ L
Sbjct: 301 LLLYGTILWGLCNESRLEEAKLLIGEI--KESGINTNAVIYTTLMDAYFKSGQATEALTL 358

Query: 567 LNSMMD 572
           L  M+D
Sbjct: 359 LEEMLD 364



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 200/416 (48%), Gaps = 4/416 (0%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L+EA     +M+    FP P + N L++ L K G    + K   +M   G   +  TYN 
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I  LC +G+L+ A SL  +M  +   P+ VTY ++I+G  KLG   +   +   M++  
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              +   Y+ LI+   K  +   A +   +M   G KPN V YS  ID  C+ G   EA 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           +   +M       N FTY+SL+    ++G   +A+++ +++ +     N V Y+ L+ GL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           CE+G+++EA  V+  ML+ G  P+   Y++++HG   A  +E A  +  EM   E   +P
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMK--EKCIKP 299

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT-- 600
           D+  Y  +L  LC +S +  +  L+  + + G + + V     + A  +  +A +  T  
Sbjct: 300 DLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLL 359

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           + + +L   L K        K+ + ML K + P    +  ++    +   +Q A+N
Sbjct: 360 EEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALN 415



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 165/348 (47%), Gaps = 16/348 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ + I  +   G  +        MRR      E ++  +  A  KA  + EA++L   +
Sbjct: 163 TYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEI 222

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +   K  V ++ ++L+ + +EG    A E +  ++NA    + PN  T+  ++    +
Sbjct: 223 L-QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA---GVAPNQETYTALVHGFIK 278

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              ++ A  + +EM  +  +PD+  Y T++ GLC E+RL+EA LL+ E++  G     V 
Sbjct: 279 AKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVI 338

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  L++   K+G+   A  L++ M              L+ GLC     + A  L D M+
Sbjct: 339 YTTLMDAYFKSGQATEALTLLEEML------------DLVDGLCKNNCFEVAKKLFDEML 386

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               MP+++ Y  +I+G +K G   +   +   M E    ++ + Y+ LI GL   G+ +
Sbjct: 387 DKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQ 446

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
            A  L  +M+ KG  P+ VVY  LI     +GK DEA E+  EM   G
Sbjct: 447 KARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 494


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 146/496 (29%), Positives = 236/496 (47%), Gaps = 43/496 (8%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V S+N+V+    +     +ALE  N +   K      + +T+ ++I   C+ G +D A+ 
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEM---KGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
             +EM     E D+  Y +L+ G C    LD    L DE+   G  P  +T+N LI G C
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G+L  A+++ + M  +G  PN  TY  LI GLC  G   +A+ LL+ M+     PN V
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  IIN L K G   D   ++  M++R+   +   Y+ L+ GL  +G  ++A KL   M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 394 MEKG--CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           ++      P+ + Y+ALI GLC+  +  +A +I   ++    A +  T + L+    ++G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
             +KA+E+WK ++ +  V N   Y+ +I G C+ G L  A+ +  +M     +P V  Y+
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 512 SMIHGLCNAGSVEEALKLFNEML--------------------CLEPKS----------- 540
            ++  LC  GS+++A +LF EM                       + KS           
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593

Query: 541 --QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PD+FTY+ L+N   K   +  +I   + M+D G +PD   C+  L     K    Q 
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-----KYCISQG 648

Query: 599 GTDFLNELAIRLFKRQ 614
            TD L EL  +L  + 
Sbjct: 649 ETDKLTELVKKLVDKD 664



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 214/432 (49%), Gaps = 39/432 (9%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           +++P+  ++N VI+  C    ++ A++L  EM    C   + T+  L+D  CK  ++DEA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           +  L EM+  G     V +  LI G C  GEL R   L D +  +G  P  +TYNTLI G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C  G L +A  + + M+     PN  TY  +I+GL  +G+  +  ++L  M E+    N
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+ +I+ L K+G   DA+++ + M ++  +P+ + Y+ L+ GLC  G  DEA ++L+
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411

Query: 427 EMINNGCAA--NAFTYSSLMKGF-----------------------------------FE 449
            M+ +      +  +Y++L+ G                                     +
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           +G  +KA+E+WK ++ +  V N   Y+ +I G C+ G L  A+ +  +M     +P V  
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ ++  LC  GS+++A +LF EM      + PDV ++NI+++   K  +I  +  LL  
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEM--QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589

Query: 570 MMDRGCDPDLVT 581
           M   G  PDL T
Sbjct: 590 MSRAGLSPDLFT 601



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 179/323 (55%)

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N+L+ GLC+N E G+A  L+  M     +P+  +YNT+I G C    L+KA+ L + M  
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           S C  + VT+G +I+   K G+  +    L  M+      +  +Y++LI G    G+ + 
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
              L+ +++E+G  P  + Y+ LI G C++G+  EA EI   MI  G   N +TY+ L+ 
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G    GK  +A+++   M + +   N V Y+++I+ LC+DG + +A  +   M  R  +P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           D + Y+ ++ GLC  G ++EA KL   ML     + PDV +YN L++ LCK++ +  ++D
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 566 LLNSMMDRGCDPDLVTCNIFLTA 588
           + + ++++    D VT NI L +
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNS 468



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 206/450 (45%), Gaps = 63/450 (14%)

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           NA+ +F++  V +     +    LM  L +    + A     +M     F   V+ + L+
Sbjct: 56  NAVSVFQQ-AVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLL 114

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
               +  + G A  ++  M  +G   N   +N L+ GLC      KAVSLL  M  +  M
Sbjct: 115 ECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM 174

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA-EDAMK 388
           P+  +Y T+I G                                    F EGK  E A++
Sbjct: 175 PDVFSYNTVIRG------------------------------------FCEGKELEKALE 198

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L  +M   GC  + V +  LID  C+ GK DEA   L EM   G  A+   Y+SL++GF 
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           + G+  +   ++ ++ +       + Y+ LI G C+ G+L+EA  ++  M+ RG +P+V 
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +I GLC  G  +EAL+L N M  +E   +P+  TYNI++N LCK   ++ +++++ 
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLM--IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
            M  R   PD +T NI L  L  K +        L+E +             K++ +ML+
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGD--------LDEAS-------------KLLYLMLK 415

Query: 629 --KFLSPQTSTWERVVQELCRPKRIQAAIN 656
              +  P   ++  ++  LC+  R+  A++
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALD 445



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 194/397 (48%), Gaps = 7/397 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI+ + + G+    + +   +          ++  + + + K   ++EA  +F  M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E   +  V ++  +++ +   G    AL+  N ++        PN +T+N++I  +C+
Sbjct: 309 I-ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE---PNAVTYNIIINKLCK 364

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP-- 262
            GLV +A+++   M  R   PD  TY  L+ GLC +  LDEA  LL  M  D  +  P  
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +++N LI+GLCK   L +A  + D +  K    + VT N L++     G+++KA+ L  +
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           +  SK + N  TY  +I+G  K G       +L  M   +   + + Y+ L+S L KEG 
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A +L+++M      P+ V ++ +IDG  + G    AE +L  M   G + + FTYS 
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYN-EVCYSVL 478
           L+  F + G   +A+  +  M  +    +  +C SVL
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 182/393 (46%), Gaps = 51/393 (12%)

Query: 82  GDS----TFYSLIQHYANSGDFK-SLEMVLYRMRREKR--VVLEKSFIFIFKAYGKAHLV 134
           GDS    T+ +LI+ +   G  K + E+  + + R  R  V      I      GK    
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK---T 333

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +EA++L + M+++      V ++N ++N + ++GL   A+E    +   K     P+ +T
Sbjct: 334 KEALQLLNLMIEKDEEPNAV-TYNIIINKLCKDGLVADAVEIVELM---KKRRTRPDNIT 389

Query: 195 FNLVIKTVCRLGLVDNAIQLFREM--PVRNCEPDIYTYCTLMDGLCKENRLDEAV----L 248
           +N+++  +C  G +D A +L   M       +PD+ +Y  L+ GLCKENRL +A+    L
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449

Query: 249 LLDEMQVDGCFPTPV-------------------------------TFNVLINGLCKNGE 277
           L++++       T +                               T+  +I+G CK G 
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           L  A  L+  M +    P+   YN L+  LC +G+LD+A  L + M      P+ V++  
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I+G +K G       +L+ M       + + YS LI+   K G  ++A+  + +M++ G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
            +P+  +  +++      G+ D+  E++ ++++
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 148/285 (51%), Gaps = 12/285 (4%)

Query: 134 VEEAIRLFHTMV-DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           ++EA +L + M+ D  +    V S+N++++ + +E   H+AL+ Y+ +V         + 
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DR 459

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMP----VRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +T N+++ +  + G V+ A++L++++     VRN +    TY  ++DG CK   L+ A  
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD----TYTAMIDGFCKTGMLNVAKG 515

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LL +M+V    P+   +N L++ LCK G L +A +L + M      P+ V++N +I G  
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G++  A SLL  M  +   P+  TY  +IN  +KLG   +       M +  F  + +
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH 635

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           I  +++     +G+ +   +L K++++K    +  +   ++D +C
Sbjct: 636 ICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 233/476 (48%), Gaps = 40/476 (8%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R ++++ +++N     G    A +   H+ +  H  + P++  +   +   CR G++ +A
Sbjct: 70  RNLRTYTTLINAYCLAGDIPAAKQ---HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHA 126

Query: 212 IQLFREMPVR-----------------------------------NCEPDIYTYCTLMDG 236
            ++F  MP+R                                   +C PD + Y T++ G
Sbjct: 127 CRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHG 186

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC+  R +EA +LL+E   +G  P  V +N LI+G C  GE+  A K+ + M    C PN
Sbjct: 187 LCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPN 246

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             TY  LIHGLC  G +++A+ L  RMV +   PN VTY  +I G    G      R+L 
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            ME      N++ +S LI  L K  K E+A      +++KG K N VVY++LIDGLC+ G
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K D A+E++ +MI+ G   +A +YSSL+ G     K  +A  + +DM +     + V Y+
Sbjct: 367 KIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           ++I  L  +      + ++ +M++ G  PD+V Y+  +   C  G +E+A  +  +M  +
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM--V 484

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +    P++ TYN L+        +S +      M+ +G  P+  +  + L  + +K
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 248/528 (46%), Gaps = 38/528 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y  +GD  + +  L  +          ++      Y +A ++  A R+F  +
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF-VL 132

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI----------VNAKHMNIL----- 189
           +    C RT  ++ ++L+ ++  G+   A+  +  +          V A  ++ L     
Sbjct: 133 MPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR 192

Query: 190 -----------------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
                            PN + +N +I   C  G +++A+++F  M    C P++ TY  
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+ GLCK  +++ A++L   M   G  P  VT+  LI G C  G L  A +L+  M   G
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +PN+ T++ LI  LC +  +++A   L  +V      NEV Y ++I+GL K G+ +D A
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK-IDAA 371

Query: 353 RVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             LM  M    F  + + YS+LI GL ++ K   A  + + MMEKG + + V Y+ +ID 
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L R    +  ++I  +MI  G   +  TY+  ++ + E G+   A  +   M       N
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V Y+ LI G    G + +A   +  M+ +G KP+  +Y+ ++  +    S + ++ ++ 
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551

Query: 532 --EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
             +M  L+ +S  D   + IL+  L ++ +++    LL+ M + G  P
Sbjct: 552 IADMKDLQ-ESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQP 598



 Score = 55.8 bits (133), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 28/222 (12%)

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           H+     + +A      N   Y+ LI+  C  G +  A+   T +L  G  PD  AY+S 
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 514 IHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + G C AG +  A ++F  M    CL        FTY  LL+ L     +  ++ +   M
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLR-----TAFTYTALLHGLLGAGMVREAMAVFVGM 168

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQ-------------DGTD----FLNELAIRLFKR 613
               C PD    +++ T +    EA +             +G +      N L       
Sbjct: 169 RADSCAPD---THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  K+ E M     SP   T+  ++  LC+  +++ A+
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 144/480 (30%), Positives = 246/480 (51%), Gaps = 41/480 (8%)

Query: 152 RTVKSFNSVLNVIIQEGLY------HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR- 204
           + V+S   +L+  I  G Y      H A + +N +   K +++ PN LT N +I  + R 
Sbjct: 129 KKVQSLRVILDTSI--GAYVSCNRPHHAAQIFNRM---KRLHLKPNLLTRNTLINALVRY 183

Query: 205 ------------------LGL---VDNAIQLFREMPVRNCEPDIYTYCTLMD--GLCKEN 241
                              G+   +  AI L  +M   +C PD  +Y T++D   LC+  
Sbjct: 184 PSKPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSG 243

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
           + D+++  L+E+   G  P  +T+N +I+G C+ G++ +A +  + M  K   P+  T N
Sbjct: 244 KTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCN 303

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            L+ GLC +G LD A+ L +  ++     + VTY TII+GL K GR  +   +L  MEE+
Sbjct: 304 ILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEK 363

Query: 362 KFHVNEYIYSTLISGLFK-EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           K   + Y Y+ ++  L   EG+ E A +   +M+EK  KP+    + L+ GLC  G  D 
Sbjct: 364 KLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDN 423

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM-AKNNCVYNEVCYSVLI 479
           A ++    I+ G A +A TY++++ G  + G+  +A ++  +M  KN  V ++  Y+ +I
Sbjct: 424 ALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTII 483

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G C +G++ +A     +M+ +  KPD+   + ++ GLC  G + +ALKLFN    +   
Sbjct: 484 LGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTW--ISKG 541

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQ 597
              D  TYN +++ LCK+     + DLL  M ++   PD  T N  L AL +  ++EA +
Sbjct: 542 KAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRMEAEE 601



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/358 (24%), Positives = 150/358 (41%), Gaps = 67/358 (18%)

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  + +RM      PN +T  T+IN LV   R      V +S         + I++ +I 
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALV---RYPSKPSVCLS---------KAIFTNVIK 201

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID--GLCRVGKPDEAEEILFEMINNGC 433
              K  K  +A+ L  +M +  C P+   Y+ ++D   LCR GK D++ + L E++ +G 
Sbjct: 202 FGVK-NKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGL 260

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                                              V +++ Y+ +IHG C +G++ +A  
Sbjct: 261 -----------------------------------VPHQITYNTIIHGYCREGQVEKAFQ 285

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
              +M+ +  KPD+   + ++ GLC  G ++ ALKLFN  +        D  TYN +++ 
Sbjct: 286 FRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWI--SKGKAIDAVTYNTIISG 343

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
           LCK+     + DLL  M ++   PD  T N  L AL +     +    F N++  + FK 
Sbjct: 344 LCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKP 403

Query: 614 QR-----------TSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                        T G      K+    + K  +    T+  ++  LC+  R + A +
Sbjct: 404 DLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFD 461


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 153/547 (27%), Positives = 267/547 (48%), Gaps = 28/547 (5%)

Query: 69  IFNSTPKLGSYQLGD--STFYSLIQHYANSG----DFKSLEMVLYRMRREKRVVLEKSFI 122
           +FN   + G+ ++    +TF  LI    ++G     F +L  ++    R + V    +F 
Sbjct: 128 MFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAV----TFT 183

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            + +         +A+ +    + E  C   V S+ ++L  +  E     A E   H++ 
Sbjct: 184 PLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELI-HMMA 242

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
               N  PN +++  VI    + G V  A  LF +M      P++ T  +++DGLCK   
Sbjct: 243 EDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQA 302

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           +D+A  +L +M  +   P   T+N LI+G   +G+   A +++  M   G  PN VTY+ 
Sbjct: 303 MDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSM 362

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI  LC  G   +A  + + M+ S   PN  TYG++++G    G  VD   V   M +  
Sbjct: 363 LIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNG 422

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
                ++++  I    K G+ ++A   + +M ++G  P+ V Y+ +IDGLC++G+ D+A 
Sbjct: 423 MRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAM 482

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
               +MI++G + +  T+++L+ GF   GK  KA E++ +M       N   ++ +I  L
Sbjct: 483 SRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKL 542

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKS 540
            ++GK+ EAR ++  M   G KP+VV+Y++MIHG   AG V E +KL ++ML   L+P +
Sbjct: 543 FKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTA 602

Query: 541 ---------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
                          +PDV T   L+++ C+   I   + L   M+ +    D +T NI 
Sbjct: 603 VTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIK 662

Query: 586 LTALKEK 592
           L  +  K
Sbjct: 663 LRGVTVK 669



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 23/250 (9%)

Query: 82  GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           G   F   I  Y   G      +   +M+++  +    ++  +     K   +++A+  F
Sbjct: 426 GRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRF 485

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M+D+      + +FN++++     G + +A E +  +++     I PN  TFN +I  
Sbjct: 486 CQMIDD-GLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDR---GIPPNVNTFNSMIDK 541

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           + + G V  A +LF  MP    +P++ +Y T++ G      + E + LLD+M + G  PT
Sbjct: 542 LFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPT 601

Query: 262 PVTFNVLINGL-------------------CKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            VTFN L++G+                   C++G +     L   M  K    + +T N 
Sbjct: 602 AVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENI 661

Query: 303 LIHGLCLKGN 312
            + G+ +K +
Sbjct: 662 KLRGVTVKAS 671


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/395 (33%), Positives = 208/395 (52%), Gaps = 20/395 (5%)

Query: 201 TVCRLGLVDNAIQLFR-------EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T   LG + +AIQ FR       ++P+R C         L+D + K N          E+
Sbjct: 179 TYTDLGFIPDAIQCFRLSRKHRFDVPIRGCG-------NLLDRMMKLNPTGTIWGFYMEI 231

Query: 254 QVDGCFPTPV-TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
            +D  FP  V  FN+L+N  CK G +  A K+ D +  +   P  V++NTLI+G C  GN
Sbjct: 232 -LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYS 371
           LD+   L  +M  S+  P+  TY  +IN L K  + +DGA  L   M +R    N+ I++
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENK-MDGAHGLFDEMCKRGLIPNDVIFT 349

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           TLI G  + G+ +   + +++M+ KG +P+ V+Y+ L++G C+ G    A  I+  MI  
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  TY++L+ GF   G    A+EI K+M +N    + V +S L+ G+C++G++ +A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
                +ML  G KPD V Y+ M+   C  G  +   KL  EM        P V TYN+LL
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM--QSDGHVPSVVTYNVLL 527

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           N LCK   + ++  LL++M++ G  PD +T N  L
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/342 (31%), Positives = 187/342 (54%), Gaps = 5/342 (1%)

Query: 176 FYNHIVNAKHMNILP-NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           FY  I++A      P N   FN+++   C+ G + +A ++F E+  R+ +P + ++ TL+
Sbjct: 227 FYMEILDAG----FPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +G CK   LDE   L  +M+     P   T++ LIN LCK  ++  A  L D M  +G +
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN+V + TLIHG    G +D       +M++    P+ V Y T++NG  K G  V    +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           +  M  R    ++  Y+TLI G  + G  E A+++ K+M + G + + V +SAL+ G+C+
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G+  +AE  L EM+  G   +  TY+ +M  F + G      ++ K+M  +  V + V 
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           Y+VL++GLC+ G+++ A M+   ML+ G  PD + Y++++ G
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 171/361 (47%), Gaps = 44/361 (12%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V  FN ++N   +EG    A + ++ I      ++ P  ++FN +I   C++G +D   +
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKR---SLQPTVVSFNTLINGYCKVGNLDEGFR 296

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF-------- 265
           L  +M      PD++TY  L++ LCKEN++D A  L DEM   G  P  V F        
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356

Query: 266 ---------------------------NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
                                      N L+NG CKNG+L  A  +VD M  +G  P+++
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY TLI G C  G+++ A+ +   M  +    + V +  ++ G+ K GR +D  R L  M
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
                  ++  Y+ ++    K+G A+   KL K+M   G  P+ V Y+ L++GLC++G+ 
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK------AVEIWKDMAKNNCVYNE 472
             A+ +L  M+N G   +  TY++L++G        K       + I  D+A    + NE
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVNE 596

Query: 473 V 473
           +
Sbjct: 597 L 597



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 151/294 (51%), Gaps = 2/294 (0%)

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N   +N L++  C +GN+  A  + D +      P  V++ T+ING  K+G   +G R+ 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             ME+ +   + + YS LI+ L KE K + A  L+ +M ++G  PN V+++ LI G  R 
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G+ D  +E   +M++ G   +   Y++L+ GF ++G    A  I   M +     +++ Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + LI G C  G +  A  +  +M   G + D V +S+++ G+C  G V +A +   EML 
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML- 477

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                +PD  TY ++++A CK+ +      LL  M   G  P +VT N+ L  L
Sbjct: 478 -RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 23/324 (7%)

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N   +  ++N   K G   D  +V   + +R        ++TLI+G  K G  ++  +L 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            QM +   +P+   YSALI+ LC+  K D A  +  EM   G   N   +++L+ G   +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G+     E ++ M       + V Y+ L++G C++G L  AR +   M+ RG +PD + Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++I G C  G VE AL++  EM   +   + D   ++ L+  +CK+  +  +   L  M
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMD--QNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
           +  G  PD VT  + + A  +K +A                       GFK+++ M    
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDA---------------------QTGFKLLKEMQSDG 515

Query: 631 LSPQTSTWERVVQELCRPKRIQAA 654
             P   T+  ++  LC+  +++ A
Sbjct: 516 HVPSVVTYNVLLNGLCKLGQMKNA 539


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 151/527 (28%), Positives = 260/527 (49%), Gaps = 35/527 (6%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRAL-EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
           KR  K    VL+ ++QE +  R + +    +V  K  N+ P+  T+N ++     L   D
Sbjct: 76  KRRFKDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYN---LRHTD 132

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
               ++ ++          T   ++DGLC ++R  +AVL L +       P+ V+FN ++
Sbjct: 133 IMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIM 192

Query: 270 NGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           +  CK G L   AK    M LK G LP+  +YN LIHGL + G++++A+ L + M     
Sbjct: 193 SRYCKLG-LADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGL 251

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMS--MEERKFHVNEYIYSTLISGLFKEGKAEDA 386
            P+ VTY  +  G   LG  + GAR ++   + +     +   Y+ LI G  + G  E+A
Sbjct: 252 QPDMVTYKIVAKGFHLLG-LMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEA 310

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           ++L + ++  G + N ++YS L+  LC+ G+ DEA ++L+EM  N    +  TYS L+ G
Sbjct: 311 LRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHG 370

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             + GK  +A++++K+M  N    N   +S ++ GLCE G L +ARM +  ++    +PD
Sbjct: 371 LCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPD 430

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           V  Y+ MI G    G VEEA++L+  +   +    P + T+N L+   CK   +  +  L
Sbjct: 431 VTLYNIMIDGYVKLGDVEEAVRLYKRL--RDKAITPSIVTFNSLIYGFCKNRKVVEARRL 488

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR----------------- 609
           L S+   G +P  VT    + A  E     +   + L+EL +                  
Sbjct: 489 LESIKLHGLEPSAVTYTTLMNAYCE-----EGNINKLHELLLEMNLKDIEPTVVTYTVVI 543

Query: 610 --LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             L K+++     +++E M  K L+P   T+  ++Q  C+ K ++ A
Sbjct: 544 KGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKA 590



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 208/399 (52%), Gaps = 2/399 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N + +++++ ++C+ G VD A+QL  EM   N +PD+ TY  L+ GLCK+ ++ +A+ L 
Sbjct: 325 NVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLY 384

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM  +  FP     + ++ GLC+ G L  A    D++ +    P+   YN +I G    
Sbjct: 385 KEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKL 444

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G++++AV L  R+      P+ VT+ ++I G  K  + V+  R+L S++      +   Y
Sbjct: 445 GDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTY 504

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TL++   +EG      +L  +M  K  +P  V Y+ +I GLC+  K +E+ ++L +M  
Sbjct: 505 TTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRA 564

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G A +  TY+++++ F ++    KA E+  DM  +N       Y+VLI GLC  G + +
Sbjct: 565 KGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVED 624

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  V   +  R      VAY++MI   C  G  + A+K+F++M  +E   +  +  Y+ +
Sbjct: 625 ADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQM--VEKGFEVSIKDYSAV 682

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +N LCK+  I+ +      M+  G  PD     + L A 
Sbjct: 683 INRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAF 721



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 128/510 (25%), Positives = 247/510 (48%), Gaps = 20/510 (3%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V SFN++++   + GL   A  F+  ++      ILP+T ++N++I  +   G ++ A+
Sbjct: 184 SVVSFNTIMSRYCKLGLADVAKSFFCMMLK---YGILPDTYSYNILIHGLIVAGSMEEAL 240

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD-GCFPTPVTFNVLING 271
           +L  +M  +  +PD+ TY  +  G      +  A  ++ +M  D G  P  VT+ VLI G
Sbjct: 241 ELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICG 300

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            C+ G +  A +L  ++   G   N + Y+ L+  LC +G +D+A+ LL  M A+   P+
Sbjct: 301 HCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPD 360

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY  +I+GL K G+     ++   M   +   N + +S ++ GL ++G   DA   + 
Sbjct: 361 LVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFD 420

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            ++    +P+  +Y+ +IDG  ++G  +EA  +   + +     +  T++SL+ GF ++ 
Sbjct: 421 SLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNR 480

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           K  +A  + + +  +    + V Y+ L++  CE+G + +   +  +M  +  +P VV Y+
Sbjct: 481 KVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYT 540

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +I GLC    +EE+++L  +M        PD  TYN ++   CK  ++  + +LL+ M+
Sbjct: 541 VVIKGLCKQRKLEESVQLLEDMRA--KGLAPDQITYNTIIQCFCKAKDMRKAFELLDDML 598

Query: 572 DRGCDPDLVTCNIFLTAL---------KEKLEAPQDGTDFLNELAIRLFKRQRTSGG--- 619
               +P   T N+ +  L            L + QD    L ++A     +     G   
Sbjct: 599 IHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQ 658

Query: 620 --FKIVEVMLQKFLSPQTSTWERVVQELCR 647
              K+   M++K        +  V+  LC+
Sbjct: 659 RAVKVFHQMVEKGFEVSIKDYSAVINRLCK 688



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 203/401 (50%), Gaps = 4/401 (0%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+EA++L + M +  + +  + +++ +++ + ++G   +A++ Y  +   +   I PN+ 
Sbjct: 342 VDEALQLLYEM-EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR---IFPNSF 397

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
             + ++K +C  G++ +A   F  + + N  PD+  Y  ++DG  K   ++EAV L   +
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +     P+ VTFN LI G CKN ++  A +L++++ L G  P+ VTY TL++  C +GN+
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNI 517

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           +K   LL  M      P  VTY  +I GL K  +  +  ++L  M  +    ++  Y+T+
Sbjct: 518 NKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTI 577

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I    K      A +L   M+    +P    Y+ LIDGLCR G  ++A+ +L  + +   
Sbjct: 578 IQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNI 637

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                 Y++++K     G   +AV+++  M +     +   YS +I+ LC+   + EA+ 
Sbjct: 638 NLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKY 697

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
            +  MLS G  PD   +  M++    AG V    +L   M+
Sbjct: 698 YFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMI 738



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/312 (31%), Positives = 169/312 (54%), Gaps = 3/312 (0%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V  +N +++  ++ G    A+  Y  +   +   I P+ +TFN +I   C+   V  A +
Sbjct: 431 VTLYNIMIDGYVKLGDVEEAVRLYKRL---RDKAITPSIVTFNSLIYGFCKNRKVVEARR 487

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L   + +   EP   TY TLM+  C+E  +++   LL EM +    PT VT+ V+I GLC
Sbjct: 488 LLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLC 547

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K  +L  + +L+++M  KG  P+++TYNT+I   C   ++ KA  LLD M+     P   
Sbjct: 548 KQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPA 607

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+GL + G   D  RVL+S+++R  ++ +  Y+T+I     +G A+ A+K++ QM
Sbjct: 608 TYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQM 667

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +EKG + +   YSA+I+ LC+    +EA+     M+++G + +   +  ++  F  +G  
Sbjct: 668 VEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHV 727

Query: 454 HKAVEIWKDMAK 465
           H   E+   M K
Sbjct: 728 HSVFELLAVMIK 739



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 139/310 (44%), Gaps = 31/310 (10%)

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM-KLWKQMMEKGCKPNTVVYSAL 408
           D   VL+ M+E+    +   Y++L+  L    +  D M  ++  + + G   +    S +
Sbjct: 101 DALFVLVKMKEQNLRPSIQTYNSLLYNL----RHTDIMWDVYNDIKDSGTPQSARTSSII 156

Query: 409 IDGLCRVGKPDEAEEILFEMINNG--CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           +DGLC  G+    + +LF   N+G   A +  +++++M  + + G    A   +  M K 
Sbjct: 157 VDGLC--GQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKY 214

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
             + +   Y++LIHGL   G + EA  +   M  +G +PD+V Y  +  G    G +  A
Sbjct: 215 GILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGA 274

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            ++  +ML  +   +PD+ TY +L+   C+  NI  ++ L   ++  G   +++  ++ L
Sbjct: 275 REIIQKMLT-DEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLL 333

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
           ++L                      KR +     +++  M    L P   T+  ++  LC
Sbjct: 334 SSL---------------------CKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLC 372

Query: 647 RPKRIQAAIN 656
           +  ++Q AI 
Sbjct: 373 KQGKVQQAIQ 382



 Score = 45.4 bits (106), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 49/257 (19%), Positives = 100/257 (38%), Gaps = 39/257 (15%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
           KL   +    T+ +L+  Y   G+   L  +L  M  +       ++  + K   K   +
Sbjct: 493 KLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKL 552

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           EE+++L   M  +      + ++N+++    +     +A E  + ++     N+ P   T
Sbjct: 553 EESVQLLEDMRAKGLAPDQI-TYNTIIQCFCKAKDMRKAFELLDDMLIH---NLEPTPAT 608

Query: 195 FNLVIKTVCRLGLVDNA-----------------------------------IQLFREMP 219
           +N++I  +CR G V++A                                   +++F +M 
Sbjct: 609 YNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMV 668

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
            +  E  I  Y  +++ LCK   ++EA      M  DG  P    F +++N   + G + 
Sbjct: 669 EKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVH 728

Query: 280 RAAKLVDNMFLKGCLPN 296
              +L+  M   G L +
Sbjct: 729 SVFELLAVMIKFGLLHD 745


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 247/507 (48%), Gaps = 6/507 (1%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           +  F ++I  +   G  K  E +L  M++ K      ++  +  AY       +A+    
Sbjct: 149 NRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMR 208

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+D   C  ++ +F +V+N    +G    A   ++ +  A H   +PN + +N ++   
Sbjct: 209 FMIDN-GCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGH---IPNVVCYNTLMNGY 264

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            +   +  A  L+ EM  +   PD  T+  L+ G  +  R ++   LL ++   G     
Sbjct: 265 VKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSIS 324

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
             +N+ ++GLC  G L  A K +++M  KG  P  V +N++I      G  +KA      
Sbjct: 325 SLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRM 384

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           MV     P+ +T  ++I GL KL R  +   +L  M      +N+  ++ L+ G F+ G 
Sbjct: 385 MVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGD 444

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A  LW +M  +G  P+ V +SA I+GL  VG  DEA ++  +M   G   N F Y+S
Sbjct: 445 VAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNS 504

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L++GF  SG+  +A+ + ++MA+   + +    +++I+GLC++G+++ A  V+  M   G
Sbjct: 505 LIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTG 564

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             PD+V Y+++I G C A       ++ N+M        PD+ TYNI L+ LC    +S 
Sbjct: 565 LIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYA--TGWDPDITTYNIRLHGLCTGRKMSR 622

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           ++ +L  ++  G  PD VT N  +  +
Sbjct: 623 AVMMLEELISAGVVPDTVTYNTVMNGV 649



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/511 (28%), Positives = 231/511 (45%), Gaps = 51/511 (9%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
           H    P    FN VI   CR G V     L   M    C+PD+Y Y  L++  C   +  
Sbjct: 142 HQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTF 201

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +A+  +  M  +GC P+ VTF  +IN  C  G +  A  L D M   G +PN V YNTL+
Sbjct: 202 DALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLM 261

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +G     ++ +A  L + M +    P+  T+  ++ G  + GR  D  R+L  + +    
Sbjct: 262 NGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSL 321

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY------------------- 405
               +Y+  +SGL   G  ++AMK  + M+EKG  P  V +                   
Sbjct: 322 SISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKA 381

Query: 406 ----------------SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
                           S+LI GL ++ +  EA ++L+EMI  G   N   ++ L+ G+F 
Sbjct: 382 YRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFR 441

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G    A  +W +M       + V +S  I+GL   G + EA  V+ QM  +G  P+   
Sbjct: 442 MGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFV 501

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+S+I G CN+G ++EAL L  EM        PD+FT NI++N LCK+  +  + D+  +
Sbjct: 502 YNSLIRGFCNSGRLQEALMLEREM--ARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRN 559

Query: 570 MMDRGCDPDLVT--------CNIFLTALKEKLEAPQDGTDF---LNELAIRLF---KRQR 615
           M   G  PD+VT        C  F T   +++      T +   +    IRL      ++
Sbjct: 560 MHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRK 619

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
            S    ++E ++   + P T T+  V+  +C
Sbjct: 620 MSRAVMMLEELISAGVVPDTVTYNTVMNGVC 650



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 185/402 (46%), Gaps = 41/402 (10%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N  ++ +   G    A++F   ++      I P  + FN +I    R GL + A + +R
Sbjct: 327 YNICVSGLCWAGWLDEAMKFLEDMLEK---GITPTVVAFNSIIAAYSRAGLEEKAYKAYR 383

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M      P   T  +L+ GL K  RL EA  LL EM V+G       F +L++G  + G
Sbjct: 384 MMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMG 443

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           ++  A  L + M  +G  P+ V ++  I+GL + G +D+A  +  +M     MPN   Y 
Sbjct: 444 DVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYN 503

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           ++I G    GR  +   +   M  +    + +  + +I+GL KEG+ + A  +++ M   
Sbjct: 504 SLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHT 563

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+ V Y+ LIDG C+       +E++ +M   G   +  T                 
Sbjct: 564 GLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITT----------------- 606

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
                             Y++ +HGLC   K+  A M+  +++S G  PD V Y+++++G
Sbjct: 607 ------------------YNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNG 648

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +C    +E A+ +  ++L +     P+V T N+LL+  CKQ 
Sbjct: 649 VC-TDVLERAMIVTAKLLKM--AFVPNVVTANLLLSHFCKQG 687



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 128/525 (24%), Positives = 217/525 (41%), Gaps = 54/525 (10%)

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMDG 236
           H++ A+++  L        V+  V R   VD + ++   M  R+ E   D     TLM G
Sbjct: 34  HVLGAQNLKFLAQD-----VVSWVIRRVGVDRSREVVEFMWKRHAEFESDFSVLDTLMRG 88

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
             K     EA+ ++  M+  G  P+     +L   L + G+ G   KL+  M  +G  P 
Sbjct: 89  FLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPC 148

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              +N +I G C KG++    SLL  M   KC P+   Y  +IN     G+  D    + 
Sbjct: 149 NRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMR 208

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +     +   + T+I+    +G   +A  L+  M E G  PN V Y+ L++G  +  
Sbjct: 209 FMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKAR 268

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
              +A  +  EM +   A +  T++ L+ G +  G+      + +D++++  +     Y+
Sbjct: 269 DIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYN 328

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML-- 534
           + + GLC  G L EA      ML +G  P VVA++S+I     AG  E+A K +  M+  
Sbjct: 329 ICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKF 388

Query: 535 CLEPKS------------------QPDVF-------------TYNILLNALCKQSNISHS 563
            L P S                    D+               + +LL+   +  +++ +
Sbjct: 389 GLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGA 448

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEK----------LEAPQDG---TDFLNELAIRL 610
             L N M  RG  PD V  + F+  L             L+  + G    +F+    IR 
Sbjct: 449 YSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRG 508

Query: 611 F-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           F    R      +   M +K L P   T   ++  LC+  R+++A
Sbjct: 509 FCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSA 553


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 208/400 (52%), Gaps = 5/400 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P++  +N VI   CR    D A ++   M  R   PD+ TY  L+  LC   +LD A+ +
Sbjct: 144 PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKV 203

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           +D++  D C PT +T+ +LI     +G +  A +L+D M  +G  P+  TYN ++ G+C 
Sbjct: 204 MDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G +D+A   +  +  +   P+   Y  ++ GL+  GR   G R++  M  +    N   
Sbjct: 264 RGLVDRAFEFVSNLNTT---PSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVT 320

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS LIS L ++GKA +A+ + + M EKG  P+   Y  LI   C+ GK D A   + +MI
Sbjct: 321 YSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMI 380

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   +   Y+++M    + G+  +A+ I+K + +  C  N   Y+ +   L   G   
Sbjct: 381 SAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKI 440

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  +  +MLS G  PD + Y+S+I  LC  G V+EA+ L  +M   E   QP V +YNI
Sbjct: 441 RALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTE--WQPTVISYNI 498

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +L  LCK   I  +I++L  M+D GC P+  T  + +  +
Sbjct: 499 VLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGV 538



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 231/483 (47%), Gaps = 30/483 (6%)

Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           LN + + G Y  AL F   +V   +    P+ +    +IK +      + A+++  E+  
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYK---PDVILCTKLIKGLFTSKRTEKAVRVM-EILE 139

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +  +PD + Y  ++ G C+ +R D A  ++  M+  G  P  VT+N+LI  LC  G+L  
Sbjct: 140 QYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDL 199

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A K++D +    C P  +TY  LI    + G++D A+ LLD M++    P+  TY  I+ 
Sbjct: 200 ALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVR 259

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G+ K G  VD  R    +       +  +Y+ L+ GL  EG+ E   +L   M+ KGC+P
Sbjct: 260 GMCKRG-LVD--RAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEP 316

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           N V YS LI  LCR GK  EA ++L  M   G   +A+ Y  L+  F + GK   A+   
Sbjct: 317 NIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFV 376

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
            DM     + + V Y+ ++  LC+ G+  EA  ++ ++   GC P+  +Y++M   L ++
Sbjct: 377 DDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSS 436

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           G    AL +  EML       PD  TYN L+++LC+   +  +I LL  M      P ++
Sbjct: 437 GDKIRALTMILEML--SNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVI 494

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
           + NI L                     + L K  R     +++ VM+     P  +T+  
Sbjct: 495 SYNIVL---------------------LGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTL 533

Query: 641 VVQ 643
           +V+
Sbjct: 534 LVE 536



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 203/409 (49%), Gaps = 16/409 (3%)

Query: 80  QLGDS---TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHL 133
           Q GD     + ++I  +  S  F +   V+ RM+       VV     I    A GK  L
Sbjct: 140 QYGDPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDL 199

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
              A+++   ++++ +C  TV ++  ++   I  G    A+   + +++     + P+  
Sbjct: 200 ---ALKVMDQLLED-NCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSR---GLQPDMY 252

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N++++ +C+ GLVD A +    +   N  P +  Y  L+ GL  E R +    L+ +M
Sbjct: 253 TYNVIVRGMCKRGLVDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEGRWEAGERLMSDM 309

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
            V GC P  VT++VLI+ LC++G+ G A  ++  M  KG  P+   Y+ LI   C +G +
Sbjct: 310 IVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKV 369

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D A+  +D M+++  +P+ V Y TI+  L K GRA +   +   +EE     N   Y+T+
Sbjct: 370 DLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTM 429

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
              L+  G    A+ +  +M+  G  P+ + Y++LI  LCR G  DEA  +L +M     
Sbjct: 430 FGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEW 489

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
                +Y+ ++ G  ++ +   A+E+   M  N C  NE  Y++L+ G+
Sbjct: 490 QPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGV 538



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 192/401 (47%), Gaps = 20/401 (4%)

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           +N LCK G+   A   ++ M  +G  P+ +    LI GL      +KAV +++ ++    
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVME-ILEQYG 142

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+   Y  +I+G  +  R     RV++ M+ R F  +   Y+ LI  L   GK + A+K
Sbjct: 143 DPDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALK 202

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           +  Q++E  C P  + Y+ LI+     G  D+A  +L EM++ G   + +TY+ +++G  
Sbjct: 203 VMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMC 262

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           + G   +A E   ++   N   +   Y++L+ GL  +G+      + + M+ +GC+P++V
Sbjct: 263 KRGLVDRAFEFVSNL---NTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIV 319

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            YS +I  LC  G   EA+ +   M   E    PD + Y+ L++A CK+  +  +I  ++
Sbjct: 320 TYSVLISSLCRDGKAGEAVDVLRVMK--EKGLNPDAYCYDPLISAFCKEGKVDLAIGFVD 377

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF--LNELAI--------RLFKRQRTSG 618
            M+  G  PD+V  N  + +L +K  A +    F  L E+           +F    +SG
Sbjct: 378 DMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSG 437

Query: 619 ----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  ++  ML   + P   T+  ++  LCR   +  AI
Sbjct: 438 DKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAI 478



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 120/257 (46%), Gaps = 16/257 (6%)

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LC+ GK  EA   L +M+  G   +    + L+KG F S +  KAV + + + +     +
Sbjct: 87  LCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGDP-D 145

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              Y+ +I G C   +   A  V  +M  RG  PDVV Y+ +I  LC  G ++ ALK+ +
Sbjct: 146 SFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMD 205

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           ++L  E    P V TY IL+ A     +I  ++ LL+ MM RG  PD+ T N+ +  + +
Sbjct: 206 QLL--EDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCK 263

Query: 592 KLEAPQDGTDFLNEL------------AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
           +    +   +F++ L               L    R   G +++  M+ K   P   T+ 
Sbjct: 264 RGLVDR-AFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYS 322

Query: 640 RVVQELCRPKRIQAAIN 656
            ++  LCR  +   A++
Sbjct: 323 VLISSLCRDGKAGEAVD 339


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 226/468 (48%), Gaps = 3/468 (0%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K + +A   +EA+ +      E  C   V S+N +L  +  +G   +A +    +   
Sbjct: 154 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
             +   P+ + +N VI    + G V+ A  LF+EM  R   PD+ TY +++  LCK   +
Sbjct: 214 GTV-CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAM 272

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A   L +M   G  P   T+N LI G    G+   A ++   M  +  LP+ V  NTL
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +  LC  G + +A  + D M      P+  +Y  ++NG    G  VD   +   M     
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             + Y ++ LI      G  + AM ++ +M + G KP+ V Y  +I  LCR+GK D+A E
Sbjct: 393 APDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
              +MI+ G   + + Y  L++GF   G   KA E+  ++  N    + V +  +I+ LC
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G++ +A+ ++   ++ G  PD V Y+ ++ G C  G +E+AL++F+ M  +    +P+
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM--VSAGIEPN 570

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           V  Y  L+N  CK   I   + L   M+ +G  P  +  NI +  L E
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 618



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 242/477 (50%), Gaps = 7/477 (1%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +EA+R+F  M  +      V + N+++  + + G    A + ++ +   K  N  P+  +
Sbjct: 308 KEAVRVFKEMRRQSILPDVV-ALNTLMGSLCKYGKIKEARDVFDTMA-MKGQN--PDVFS 363

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           + +++      G + +   LF  M      PDIYT+  L+        LD+A+++ +EM+
Sbjct: 364 YTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 423

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P  VT+  +I  LC+ G++  A +  + M  +G +P++  Y+ LI G C  G+L 
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           KA  L+  ++ +    + V +G+IIN L KLGR +D   +         H +  +Y+ L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G    GK E A++++  M+  G +PN V Y  L++G C++G+ DE   +  EM+  G  
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            +   Y+ ++ G FE+G+   A   + +M ++    N+  YS+++ GL ++    EA  +
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           + ++ +   K D++  ++MI G+     VEEA  LF  +        P   TY+I++  L
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS--RSGLVPCAVTYSIMITNL 721

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
            K+  +  + D+ +SM + GC+PD    N  +  L +K E  + G  +L+++  R F
Sbjct: 722 LKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA-YLSKIDERNF 777



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 249/492 (50%), Gaps = 12/492 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREK---RVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI  Y+++G +K    V   MRR+     VV   + +     YGK   ++EA  +F
Sbjct: 293 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGK---IKEARDVF 349

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            TM  +      V S+  +LN    +G      + ++ ++      I P+  TFN++IK 
Sbjct: 350 DTMAMKGQ-NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD---GIAPDIYTFNVLIKA 405

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
               G++D A+ +F EM     +P + TY T++  LC+  ++D+A+   ++M   G  P 
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
              ++ LI G C +G L +A +L+  +   G   + V + ++I+ LC  G +  A ++ D
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             V     P+ V Y  +++G   +G+     RV  +M       N   Y TL++G  K G
Sbjct: 526 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + ++ + L+++M++KG KP+T++Y+ +IDGL   G+   A+    EM  +G A N  TYS
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 645

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            +++G F++    +A+ ++K++   N   + +  + +I G+ +  ++ EA+ ++  +   
Sbjct: 646 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G  P  V YS MI  L   G VEEA  +F+ M       +PD    N ++  L K++ I 
Sbjct: 706 GLVPCAVTYSIMITNLLKEGLVEEAEDMFSSM--QNAGCEPDSRLLNHVVRELLKKNEIV 763

Query: 562 HSIDLLNSMMDR 573
            +   L+ + +R
Sbjct: 764 RAGAYLSKIDER 775



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 252/546 (46%), Gaps = 15/546 (2%)

Query: 59  AKSEQPFSDEIFNSTPKLGSYQLGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVL 117
           AK      D + + TP+LG   + D   Y+ L++   N G     + +L RM  E   V 
Sbjct: 161 AKRTDEALDILLHRTPELGC--VPDVFSYNILLKSLCNQGKSGQADDLL-RMMAEGGTVC 217

Query: 118 EKSFIF---IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
               +    +   + K   V +A  LF  MV        + +++SV++ + +     +A 
Sbjct: 218 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDLVTYSSVVHALCKARAMDKAE 276

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
            F   +VN     +LP+  T+N +I      G    A+++F+EM  ++  PD+    TLM
Sbjct: 277 AFLRQMVNK---GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             LCK  ++ EA  + D M + G  P   ++ +++NG    G L     L D M   G  
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+  T+N LI      G LDKA+ + + M      P+ VTY T+I  L ++G+  D    
Sbjct: 394 PDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M ++    ++Y Y  LI G    G    A +L  ++M  G + + V + ++I+ LC+
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +G+  +A+ I    +N G   +A  Y+ LM G+   GK  KA+ ++  M       N V 
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y  L++G C+ G++ E   ++ +ML +G KP  + Y+ +I GL  AG    A   F+EM 
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM- 632

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEK 592
             E     +  TY+I+L  L K      +I L   +       D++T N  +  +    +
Sbjct: 633 -TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691

Query: 593 LEAPQD 598
           +E  +D
Sbjct: 692 VEEAKD 697



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 216/472 (45%), Gaps = 25/472 (5%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN--CEPDIYTYCTLMDGLCKENR 242
            +  +P+  ++N+++K++C  G    A  L R M      C PD+  Y T++DG  KE  
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           +++A  L  EM   G  P  VT++ +++ LCK   + +A   +  M  KG LP+  TYN 
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI+G    G   +AV +   M     +P+ V   T++  L K G+  +   V  +M  + 
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
            + + + Y+ +++G   +G   D   L+  M+  G  P+   ++ LI      G  D+A 
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAM 416

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            I  EM ++G   +  TY +++      GK   A+E +  M     V ++  Y  LI G 
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C  G L +A+ + +++++ G + D+V + S+I+ LC  G V +A  +F+  L +     P
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD--LTVNVGLHP 534

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           D   YN+L++  C    +  ++ + ++M+  G +P++V     +                
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY------------- 581

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    K  R   G  +   MLQK + P T  +  ++  L    R   A
Sbjct: 582 --------CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 200/395 (50%), Gaps = 7/395 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-L 248
           P + T+ +++    R    + A+  F ++       D      L+ G C+  R DEA+ +
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHG 306
           LL      GC P   ++N+L+  LC  G+ G+A  L+  M   G  C P+ V YNT+I G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSMEERKFHV 365
              +G+++KA  L   MV     P+ VTY ++++ L K  RA+D A   L  M  +    
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK-ARAMDKAEAFLRQMVNKGVLP 289

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + Y+ LI G    G+ ++A++++K+M  +   P+ V  + L+  LC+ GK  EA ++ 
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M   G   + F+Y+ ++ G+   G      +++  M  +    +   ++VLI      
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 409

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L +A +++ +M   G KP VV Y ++I  LC  G +++A++ FN+M  ++    PD +
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM--IDQGVVPDKY 467

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            Y+ L+   C   ++  + +L++ +M+ G   D+V
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIV 502



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 183/406 (45%), Gaps = 39/406 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + KAY    ++++A+ +F+ M D    K  V ++ +V+  + + G    A+E +N 
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQ 456

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++     ++P+   ++ +I+  C  G +  A +L  E+       DI  + ++++ LCK
Sbjct: 457 MID---QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R+ +A  + D     G  P  V +N+L++G C  G++ +A ++ D M   G  PN V 
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y TL++G C  G +D+ +SL   M+     P+ + Y  II+GL + GR V        M 
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633

Query: 360 ERKFHVNEYIYS-----------------------------------TLISGLFKEGKAE 384
           E    +N+  YS                                   T+I+G+F+  + E
Sbjct: 634 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 693

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A  L+  +   G  P  V YS +I  L + G  +EAE++   M N GC  ++   + ++
Sbjct: 694 EAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +   +  +  +A      + + N     +   +L+      G  RE
Sbjct: 754 RELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 147/349 (42%), Gaps = 54/349 (15%)

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R      Y Y+ L+    +  + E A+  + Q++  G + + ++ S L+ G C   + DE
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 421 AEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN--CVYNEVCYSV 477
           A +IL       GC  + F+Y+ L+K     GK  +A ++ + MA+    C  + V Y+ 
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA----------------- 520
           +I G  ++G + +A  ++ +M+ RG  PD+V YSS++H LC A                 
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 521 ------------------GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
                             G  +EA+++F EM        PDV   N L+ +LCK   I  
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM--RRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAPQDGTDFLNELAIR--------LFK 612
           + D+ ++M  +G +PD+ +  I L     K  L    D  D +    I         L K
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIK 404

Query: 613 RQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
                G       I   M    + P   T+  V+  LCR  ++  A+ K
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 233/476 (48%), Gaps = 40/476 (8%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R ++++ +++N     G    A +   H+ +  H  + P++  +   +   CR G++ +A
Sbjct: 70  RNLRTYTTLINAYCLAGDIPAAKQ---HLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHA 126

Query: 212 IQLFREMPVR-----------------------------------NCEPDIYTYCTLMDG 236
            ++F  MP+R                                   +C PD + Y T++ G
Sbjct: 127 CRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHG 186

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC+  R +EA +LL+E   +G  P  V +N LI+G C  GE+  A K+ + M    C PN
Sbjct: 187 LCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPN 246

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             TY  LIHGLC  G +++A+ L  RMV +   PN VTY  +I G    G      R+L 
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            ME      N++ +S LI  L K  K E+A      +++KG K N VVY++LIDGLC+ G
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K D A+E++ +MI+ G   +A +YSSL+ G     K  +A  + +DM +     + V Y+
Sbjct: 367 KIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT 426

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           ++I  L  +      + ++ +M++ G  PD+V Y+  +   C  G +E+A  +  +M  +
Sbjct: 427 IIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM--V 484

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +    P++ TYN L+        +S +      M+ +G  P+  +  + L  + +K
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKK 540



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 229/481 (47%), Gaps = 18/481 (3%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y  A  +E A+++F  M D   C   V+++  +++ + + G   RA+  ++ +V A
Sbjct: 218 LIDGYCNAGEMEHALKVFEGM-DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEA 276

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               + PN +T+  +I+  C  G +  A +L   M      P+ +T+  L+D LCK  ++
Sbjct: 277 ---GLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA L L  +   G     V +  LI+GLCK G++  A +L+  M  +G +P+  +Y++L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I GLC +  L +A  +L+ M+      + VTY  II+ LV+   +    ++   M     
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGI 453

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
           + +   Y+  +    +EG+ EDA  +  QM+++G  PN V Y+ LI G   +G   +A  
Sbjct: 454 NPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFS 513

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK--DMAKNNCVYNEVC------- 474
               M+  G   N  +Y+ L++   +      +V+IWK  DM     +  ++        
Sbjct: 514 TFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLA 573

Query: 475 ---YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              YS  I  LC   +L EA+  +  M +    P    Y+S+I   C    + +AL L +
Sbjct: 574 ADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLD 633

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            M   +    P + +Y I++++LC+  N   + ++   ++ +  + D +   I +  L +
Sbjct: 634 SMT--KSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQ 691

Query: 592 K 592
           K
Sbjct: 692 K 692



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 148/587 (25%), Positives = 253/587 (43%), Gaps = 84/587 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y  +GD  + +  L  +          ++      Y +A ++  A R+F  +
Sbjct: 74  TYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVF-VL 132

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY----------NHIVNAKHMNIL----- 189
           +    C RT  ++ ++L+ ++  G+   A+  +          +  V A  ++ L     
Sbjct: 133 MPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR 192

Query: 190 -----------------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
                            PN + +N +I   C  G +++A+++F  M    C P++ TY  
Sbjct: 193 TEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTE 252

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+ GLCK  +++ A++L   M   G  P  VT+  LI G C  G L  A +L+  M   G
Sbjct: 253 LIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNG 312

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +PN+ T++ LI  LC +  +++A   L  +V      NEV Y ++I+GL K G+ +D A
Sbjct: 313 LVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGK-IDAA 371

Query: 353 RVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             LM  M    F  + + YS+LI GL ++ K   A  + + MMEKG + + V Y+ +ID 
Sbjct: 372 DELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDE 431

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L R    +  ++I  +MI  G   +  TY+  ++ + E G+   A  +   M       N
Sbjct: 432 LVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPN 491

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD----------VVA------------ 509
            V Y+ LI G    G + +A   +  M+ +G KP+          VV             
Sbjct: 492 LVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK 551

Query: 510 -------------------------YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
                                    YS  I  LC    +EEA   F  M         DV
Sbjct: 552 IADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDV 611

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           +T   +++  C+   ++ ++ LL+SM   G  P L +  I +++L E
Sbjct: 612 YTS--IIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCE 656



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 120/495 (24%), Positives = 216/495 (43%), Gaps = 51/495 (10%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +LI  Y N+G+ +    V   M   +     +++  +     K+  VE A+ LF  MV
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR- 204
            E   +  V ++ +++     EG    A     H++      ++PN  TF+++I  +C+ 
Sbjct: 275 -EAGLEPNVVTYTALIQGQCNEGHLQCAFRLL-HLMETN--GLVPNDWTFSVLIDALCKR 330

Query: 205 ----------------------------------LGLVDNAIQLFREMPVRNCEPDIYTY 230
                                              G +D A +L ++M      PD ++Y
Sbjct: 331 EKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSY 390

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +L+DGLC++ +L +A L+L++M   G   +PVT+ ++I+ L +        K+ D M  
Sbjct: 391 SSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            G  P+ VTY   +   C +G ++ A S++ +MV     PN VTY T+I G   LG    
Sbjct: 451 TGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQ 510

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK------------QMMEKGC 398
                  M  + +  NE  Y+ L+  + K+  +++++ +WK             + E+  
Sbjct: 511 AFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQL 570

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
                +YS  I  LCRV + +EA+     M N     +   Y+S++           A+ 
Sbjct: 571 PLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALT 630

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           +   M K+  + +   Y ++I  LCE G  R A+ V+  +L +    D + +  +I+GL 
Sbjct: 631 LLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLL 690

Query: 519 NAGSVEEALKLFNEM 533
             GSV E   L + M
Sbjct: 691 QKGSVAEFSSLLSVM 705



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/275 (22%), Positives = 123/275 (44%), Gaps = 13/275 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+   ++ Y   G  +  E ++ +M          ++  + + Y    LV +A   F  M
Sbjct: 459 TYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVM 518

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT---------- 194
           V +   K    S+  +L +++++     +++ +  I + K + +L   +T          
Sbjct: 519 VGK-GWKPNEDSYTVLLRLVVKKSSSDNSVDIWK-IADMKDLQVLLEDITERQLPLAADI 576

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           ++  I+ +CR+  ++ A   F  M   N  P    Y +++D  C+   L +A+ LLD M 
Sbjct: 577 YSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMT 636

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P   ++ ++I+ LC+ G    A ++  ++ LK    +E+ +  LI+GL  KG++ 
Sbjct: 637 KSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVA 696

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
           +  SLL  M      P+  T   +I G + +   V
Sbjct: 697 EFSSLLSVMKEHGYQPSN-TINAMITGEITVTNEV 730



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 28/222 (12%)

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           H+     + +A      N   Y+ LI+  C  G +  A+   T +L  G  PD  AY+S 
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 514 IHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + G C AG +  A ++F  M    CL        FTY  LL+ L     +  ++ +   M
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLR-----TAFTYTALLHGLLGAGMVREAMAVFVGM 168

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQ-------------DGTD----FLNELAIRLFKR 613
               C PD    +++ T +    EA +             +G +      N L       
Sbjct: 169 RADSCAPD---THVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNA 225

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  K+ E M     SP   T+  ++  LC+  +++ A+
Sbjct: 226 GEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAM 267


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/409 (32%), Positives = 214/409 (52%), Gaps = 8/409 (1%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V ++  K ++ S N +L+ +++          Y  ++  +   I PN  TFN+ I  +C+
Sbjct: 156 VQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRR---IQPNLTTFNIFINGLCK 212

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN---RLDEAVLLLDEMQVDGCFPT 261
            G ++ A  +  ++      P+I TY TL+DG CK+    ++  A  +L EM  +   P 
Sbjct: 213 AGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPN 272

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            +TFN LI+G CK+  +  A    + M  +G  PN VTYN+LI+GL   G LD+A++L D
Sbjct: 273 EITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWD 332

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +MV     PN VT+  +ING  K     +  ++   + E+    N   ++T+I    K G
Sbjct: 333 KMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAG 392

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             E+   L   M+++G  PN   Y+ LI GLCR      A+++L EM N    A+  TY+
Sbjct: 393 MMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYN 452

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            L+ G+ + G+  KA ++  +M       N V Y+ L+ G C +G L+ A  V TQM   
Sbjct: 453 ILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKE 512

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           G + +VV Y+ +I G C  G +E+A +L NEM  LE    P+  TY+++
Sbjct: 513 GKRANVVTYNVLIKGFCKTGKLEDANRLLNEM--LEKGLNPNRTTYDVV 559



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 156/535 (29%), Positives = 259/535 (48%), Gaps = 27/535 (5%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           K  IF+ + +      E  +R F     EF     +++   VL+++     Y +   F +
Sbjct: 43  KPAIFLDQLFNAGVDSELVLRFFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLD 102

Query: 179 HIV-NAKH-MNILPNTLTF-------NLVIKTVCRLGLVDN-----AIQLFREMPVRNCE 224
            +V N KH ++ + ++L         N +I  +  L  V N     A ++FR +     +
Sbjct: 103 KLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFK 162

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
             + +   L+  L K N   E   +  EM      P   TFN+ INGLCK G+L +A  +
Sbjct: 163 LSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDV 222

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK---AVSLLDRMVASKCMPNEVTYGTIING 341
           ++++   G  PN VTYNTLI G C KG+  K   A ++L  M+A+K  PNE+T+ T+I+G
Sbjct: 223 IEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDG 282

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
             K    +        M+ +    N   Y++LI+GL   GK ++A+ LW +M+  G KPN
Sbjct: 283 FCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPN 342

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V ++ALI+G C+     EA ++  ++       NA T+++++  F ++G   +   +  
Sbjct: 343 IVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHN 402

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
            M       N   Y+ LI GLC +  +R A+ +  +M +   K DVV Y+ +I G C  G
Sbjct: 403 SMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDG 462

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
              +A KL  EML +  K  P+  TYN L++  C + N+  ++ +   M   G   ++VT
Sbjct: 463 EPSKAEKLLGEMLNVGVK--PNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVT 520

Query: 582 CNIFLTAL--KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV-MLQKFLSP 633
            N+ +       KLE   D    LNE+  +     RT+  + +V + ML+K   P
Sbjct: 521 YNVLIKGFCKTGKLE---DANRLLNEMLEKGLNPNRTT--YDVVRLEMLEKGFIP 570



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 185/370 (50%), Gaps = 41/370 (11%)

Query: 289 FLKGCLPNEV-TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           FL   + NE  T +++ H L L G+   A +L+  M+    + N   +            
Sbjct: 100 FLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIH------------ 147

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                 V   +++  F ++    + L+S L K  +  +   ++K+M+++  +PN   ++ 
Sbjct: 148 --SACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNI 205

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE---SGKGHKAVEIWKDMA 464
            I+GLC+ GK ++AE+++ ++   G + N  TY++L+ G  +   +GK ++A  I K+M 
Sbjct: 206 FINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEML 265

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
            N    NE+ ++ LI G C+D  +  A+  + +M  +G KP++V Y+S+I+GL N G ++
Sbjct: 266 ANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLD 325

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA+ L+++M+ L  K  P++ T+N L+N  CK+  I  +  L + + ++   P+ +T N 
Sbjct: 326 EAIALWDKMVGLGLK--PNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            + A                       K      GF +   ML + + P  ST+  ++  
Sbjct: 384 MIDAF---------------------CKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAG 422

Query: 645 LCRPKRIQAA 654
           LCR + ++AA
Sbjct: 423 LCRNQNVRAA 432



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 156/320 (48%), Gaps = 26/320 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF +LI  +    +  + +     M+R+     +V   S I      GK   ++EAI L+
Sbjct: 275 TFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGK---LDEAIALW 331

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             MV     K  + +FN+++N   ++ +   A + ++ I      +++PN +TFN +I  
Sbjct: 332 DKMVG-LGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA---EQDLVPNAITFNTMIDA 387

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+ G+++    L   M      P++ TY  L+ GLC+   +  A  LL+EM+       
Sbjct: 388 FCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKAD 447

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+N+LI G CK+GE  +A KL+  M   G  PN VTYNTL+ G C++GNL  A+ +  
Sbjct: 448 VVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRT 507

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +M       N VTY  +I G  K G+  D  R+L  M E+  + N   Y           
Sbjct: 508 QMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY----------- 556

Query: 382 KAEDAMKLWKQMMEKGCKPN 401
              D ++L  +M+EKG  P+
Sbjct: 557 ---DVVRL--EMLEKGFIPD 571


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 135/463 (29%), Positives = 239/463 (51%), Gaps = 18/463 (3%)

Query: 123 FIFKAYGKAHL-------VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           FI + +G+A         ++EAI LF  M+        V+ F+ +L+ I +   Y   + 
Sbjct: 32  FISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVE-FSKLLSNIAKSKNYDLVIS 90

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
            ++   N +   I  +  T+N+VI  +CR      A+ +  +M     EPD+ T  +L++
Sbjct: 91  LFH---NMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLIN 147

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           G C+ NR+  AV L+ +M+   C    V +N +I+G CK G +  A  L   M   G   
Sbjct: 148 GFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRA 207

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           + VTYN+L+ GLC  G    A  L+  MV    +PN +T+  +IN  V+ G+ ++  +  
Sbjct: 208 DTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFY 267

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M  R    + + Y+++I GL   G+ ++A ++   M+ KGC P+ V Y+ LI+G C+ 
Sbjct: 268 EEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKT 327

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            + DE  +++ EM   G   +  T++++++G+F++G+   A EI+  M       N   Y
Sbjct: 328 KRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGSRP---NIRTY 384

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           S+L++GLC + ++ +A +++  M     + D+  Y+ +IHG+C  G+VE+A  LF     
Sbjct: 385 SILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCS--- 441

Query: 536 LEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           L  K  +PDV TY  +++  C++     +  L   M + G  P
Sbjct: 442 LSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 233/431 (54%), Gaps = 10/431 (2%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A++ + +++ ++    LP+ + F+ ++  + +    D  I LF  M +     D+YTY  
Sbjct: 53  AIDLFCNMIQSRP---LPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++ LC+ +R   A+ ++ +M   G  P  VT + LING C+   +  A  LV  M    
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C  + V YNT+I G C  G ++ A+ L  RM       + VTY +++ GL   GR  D A
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R++  M  R    N   ++ LI+   +EGK  +A K +++M+ +   P+   Y+++I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C  G+ DEA++IL  M+  GC  +  TY++L+ GF ++ +  +  ++ ++M++   V + 
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V ++ +I G  + G+   A+ ++++M   G +P++  YS +++GLC    VE+AL LF  
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFES 406

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M   + + + D+ TYNI+++ +C   N+  + DL  S+  +G +PD+VT    ++    K
Sbjct: 407 M--QKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK 464

Query: 593 LEAPQDGTDFL 603
                D  DFL
Sbjct: 465 --RLWDKADFL 473



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 205/438 (46%), Gaps = 53/438 (12%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           LDEA+ L   M      P+ V F+ L++ + K+        L  NM + G   +  TYN 
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I+ LC       A+S++ +M+     P+ VT  ++ING  +  R      ++  MEE +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
             ++  IY+T+I G  K G   +A+ L+ +M   G + +TV Y++L+ GLC  G+  +A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV-CYSVLIHG 481
            ++ +M+      N  T+++L+  F   GK  +A + +++M +  C+  +V  Y+ +IHG
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRR-CIDPDVFTYNSMIHG 288

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLE 537
           LC  G++ EA+ +   M+++GC PDVV Y+++I+G C    V+E  KL  EM    L ++
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVD 348

Query: 538 P--------------------------KSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
                                       S+P++ TY+ILL  LC    +  ++ L  SM 
Sbjct: 349 TVTFNTIIQGYFQAGRPDAAQEIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQ 408

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
               + D+ T NI +  +   +   +D  D    L+                     K L
Sbjct: 409 KSEMELDITTYNIVIHGMC-MIGNVEDAWDLFCSLSF--------------------KGL 447

Query: 632 SPQTSTWERVVQELCRPK 649
            P   T+  ++   CR +
Sbjct: 448 EPDVVTYTTMISGFCRKR 465



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 175/358 (48%), Gaps = 13/358 (3%)

Query: 78  SYQLGDSTFYSLIQHYANSGD-FKSLEMV--LYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
            Y+    T  SLI  +      F ++++V  +  MR +  VV+  + I     + K  LV
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTII---DGFCKTGLV 190

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
             A+ LF  M  +     TV ++NS++  +   G    A      +V     +I+PN +T
Sbjct: 191 NNALVLFGRMERDGVRADTV-TYNSLVTGLCCSGRRSDAARLMRDMV---MRDIVPNVIT 246

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           F  +I    R G    A + + EM  R  +PD++TY +++ GLC   ++DEA  +LD M 
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMV 306

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             GCFP  VT+N LING CK   +    KLV  M  +G + + VT+NT+I G    G  D
Sbjct: 307 TKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPD 366

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A  +  RM +    PN  TY  ++ GL    R      +  SM++ +  ++   Y+ +I
Sbjct: 367 AAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVI 423

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
            G+   G  EDA  L+  +  KG +P+ V Y+ +I G CR    D+A+ +  +M  +G
Sbjct: 424 HGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDG 481



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 171/348 (49%), Gaps = 27/348 (7%)

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           L  NLD+A+ L   M+ S+ +P+ V +  +++ + K         +  +ME      + Y
Sbjct: 46  LSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLY 105

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ +I+ L +  +   A+ +  +MM+ G +P+ V  S+LI+G C+  +   A +++ +M
Sbjct: 106 TYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKM 165

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
               C  +   Y++++ GF ++G  + A+ ++  M ++    + V Y+ L+ GLC  G+ 
Sbjct: 166 EEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR 225

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CLEPKSQPDVFT 546
            +A  +   M+ R   P+V+ ++++I+     G   EA K + EM+  C++P    DVFT
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDP----DVFT 281

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN +++ LC    +  +  +L+ M+ +GC PD+VT N  +                    
Sbjct: 282 YNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGF----------------- 324

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                K +R   G K+V  M Q+ L   T T+  ++Q   +  R  AA
Sbjct: 325 ----CKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAA 368



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 13/249 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           TF +LI  +   G F   +     M R   +  V    S I     +G+   V+EA ++ 
Sbjct: 246 TFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQ---VDEAKQIL 302

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             MV +  C   V ++N+++N   +     R  E    +       ++ +T+TFN +I+ 
Sbjct: 303 DLMVTK-GCFPDVVTYNTLINGFCKT---KRVDEGTKLVREMSQRGLVVDTVTFNTIIQG 358

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G  D A ++F  M  R   P+I TY  L+ GLC   R+++A++L + MQ       
Sbjct: 359 YFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELD 415

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             T+N++I+G+C  G +  A  L  ++  KG  P+ VTY T+I G C K   DKA  L  
Sbjct: 416 ITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYR 475

Query: 322 RMVASKCMP 330
           +M     +P
Sbjct: 476 KMQEDGLLP 484


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 205/399 (51%), Gaps = 13/399 (3%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
            +A+EF+  +   K   + P+  ++++++  +   G +  A  LF  M    C PDI TY
Sbjct: 158 EQAMEFFKEM---KASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTY 211

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             LMDG CK  +  EA  L+ E+   G  P   T++++IN  CK  ++  A ++   M  
Sbjct: 212 NVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE 271

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK-LGRAV 349
             C+PN VT+NTLI G C  G L+ A+ L   M    C    VTY T+I+ L K  G   
Sbjct: 272 SNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVY 331

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               +   +E          Y++LI G     +  +AM+ + +M E  C PN + YS LI
Sbjct: 332 TAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILI 390

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DGLC+V +  EA + L +M  +G      TY  L+ GF + G+   A+  ++ M    C 
Sbjct: 391 DGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCA 450

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N V ++ LI GLC+  +  +   +   M + GCKPDV+ Y+ +I GLC+A  VE+A +L
Sbjct: 451 PNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 510

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           F+ M C      P+V T+N L+  LC Q  +  + ++L+
Sbjct: 511 FDGMAC-----APNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/516 (27%), Positives = 251/516 (48%), Gaps = 28/516 (5%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           N++L+ ++    + +AL  +  ++        PN  T+N++I+  C+ G +  A+ +F +
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGL---FAPNAHTYNVLIRGFCKGGQMHQAVSVFSD 57

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M      P+  T  TL+ GLC+  ++  A+ L  EMQ     PT  + N+L+ G    G 
Sbjct: 58  MKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR 117

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN----LDKAVSLLDRMVASKCMPNEV 333
           +  A   + +M          TYN ++ GLC +      L++A+     M AS   P+  
Sbjct: 118 VRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLE 177

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           +Y  +++ L   GR  +   +  +M       +   Y+ L+ G  K G+  +A  L K++
Sbjct: 178 SYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           ++ G +PN   YS +I+  C++ K +EA E+  +MI + C  NA T+++L+ GF ++G  
Sbjct: 235 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 294

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED-GKLREARMVWTQMLSRGCKPDVVAYSS 512
             A++++ +M K  C    V Y+ LI  LC+  G +  A  ++ ++   G  P +V Y+S
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 354

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I G C+A  + EA++ F+EM   E K  P+V TY+IL++ LCK   +  +   L  M  
Sbjct: 355 LIQGFCDARRLSEAMQYFDEM---EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKA 411

Query: 573 RGCDPDLVT----------CNIFLTAL----KEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            G  P +VT          C    +AL    K KL      T   N L   L K +R + 
Sbjct: 412 HGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAND 471

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           G +++  M  +   P   T+  ++  LC   R++ A
Sbjct: 472 GLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDA 507



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 138/456 (30%), Positives = 223/456 (48%), Gaps = 19/456 (4%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC----RLGLV 208
           T  S N +L      G    AL    H+ + +  +    T T+NLV+K +C        +
Sbjct: 101 TSASHNILLRGFFMAGRVRDALA---HLQDMRKSSSSVATGTYNLVLKGLCWENKSANRL 157

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           + A++ F+EM     EPD+ +Y  L+  L    R+ EA  L   M    C P  +T+NVL
Sbjct: 158 EQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVL 214

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           ++G CK G+   A  L+  +   G  PN  TY+ +I+  C    +++A  +  +M+ S C
Sbjct: 215 MDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNC 274

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE-GKAEDAM 387
           +PN VT+ T+I G  K G   D  ++   ME+         Y+TLI  L K+ G    A+
Sbjct: 275 VPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAV 334

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            L+ ++   G  P  V Y++LI G C   +  EA +   EM    CA N  TYS L+ G 
Sbjct: 335 DLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGL 393

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            +  +  +A +  +DM  +      V Y  LI+G C+ G+L+ A + + +M   GC P+ 
Sbjct: 394 CKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNT 453

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V ++++I GLC A    + L+L   M       +PDV TYN L++ LC  + +  +  L 
Sbjct: 454 VIFNTLIDGLCKAERANDGLRLLCHMH--AEGCKPDVITYNCLISGLCSANRVEDAQRLF 511

Query: 568 NSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTD 601
           + M    C P++ T N  +  L  ++K+E  ++  D
Sbjct: 512 DGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 176/392 (44%), Gaps = 44/392 (11%)

Query: 35  SHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYA 94
           +H  FS  +             G  K  Q +  +          Y+    T+  +I  Y 
Sbjct: 195 AHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYC 254

Query: 95  NSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTV 154
                +    V  +M     V    +F  +   + KA ++E+AI+LF  M ++  CK T+
Sbjct: 255 KLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM-EKIGCKATI 313

Query: 155 KSFNSVLNVIIQE-GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
            ++N++++ + ++ G  + A++ +N +  A    + P  +T+N +I+  C    +  A+Q
Sbjct: 314 VTYNTLIDSLCKKRGGVYTAVDLFNKLEGA---GLTPTIVTYNSLIQGFCDARRLSEAMQ 370

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
            F EM  + C P++ TY  L+DGLCK  R+ EA   L++M+  G  PT VT+  LING C
Sbjct: 371 YFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFC 429

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K GEL  A    + M L GC PN V +NTLI GLC     +  + LL  M A  C P+ +
Sbjct: 430 KCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVI 489

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+GL    R                                    EDA +L+  M
Sbjct: 490 TYNCLISGLCSANR-----------------------------------VEDAQRLFDGM 514

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
               C PN   ++ LI GLC   K +EA  IL
Sbjct: 515 ---ACAPNVTTFNFLIRGLCAQKKVEEARNIL 543


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 215/413 (52%), Gaps = 11/413 (2%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +T TFN++++ +C  G    A++L R+MP     P+  TY T++ G C   R+   + ++
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIM 170

Query: 251 DEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLC 308
            EM +  G  P   T+  +I+G CK G++  A K+ D M  +G + PN V YN LI G C
Sbjct: 171 REMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYC 230

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +GNL+ A+     MV         TY   ++ L   GRA +   ++  M E+    + +
Sbjct: 231 DQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAF 290

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ LI+G  KEGK + AMK+++ M+ KG +   V Y++LI  L   G   E + +  + 
Sbjct: 291 TYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDA 350

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +  G   + F Y++L+      G   +A EI  +M K     ++V Y+ L+ GLC  G+L
Sbjct: 351 VRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRL 410

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EAR +  +M  RG +PD+V+Y+++I G    G +++A+K+ +EM+       P + TYN
Sbjct: 411 DEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMG--KGFNPTLLTYN 468

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPD---LVTCNIFLTALKEKLEAPQD 598
            ++  LC       + DL+  M+  G  PD    ++    LT   E+L A  D
Sbjct: 469 AMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLAAGDD 521



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ ++I  +   G  ++   ++  MR    +  +K ++  +   + K   VE+A ++F  
Sbjct: 149 TYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDE 208

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ E   +     +N+++     +G    AL +   +V+     +     T+NL + T+ 
Sbjct: 209 MLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDR---GVSMTVATYNLFVHTLF 265

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G    A  L  EM  +   PD +TY  L++G CKE +  +A+ + + M   G   T V
Sbjct: 266 MEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVV 325

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  LI+ L   G +    +L ++   +G  P+   YN LI+  C  G++D+A  ++  M
Sbjct: 326 TYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM 385

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGK 382
              +  P++VTY T++ GL  LGR +D AR L+  M +R    +   Y+TLISG   +G 
Sbjct: 386 EKKRITPDDVTYNTLMRGLCLLGR-LDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +DA+K+  +MM KG  P  + Y+A+I GLC  G+  +AE+++ EM+ NG   +  TY S
Sbjct: 445 IKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYIS 504

Query: 443 LMKGF 447
           L++G 
Sbjct: 505 LIEGL 509



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/328 (24%), Positives = 149/328 (45%), Gaps = 39/328 (11%)

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           T+  ++  L   G+ V    +L  M       N   Y+T+I+G    G+ +  +++ ++M
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPSP----NAVTYNTVIAGFCARGRVQAGIEIMREM 173

Query: 394 MEKG-CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGFFESG 451
            E+G   P+   Y+ +I G C+VGK ++A ++  EM+  G    NA  Y++L+ G+ + G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
               A+    +M           Y++ +H L  +G+  EA  +  +M  +G  PD   Y+
Sbjct: 234 NLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYN 293

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +I+G C  G  ++A+K+F  M+    ++   V TY  L++AL  +  +  +  L N  +
Sbjct: 294 ILINGYCKEGKEKKAMKMFEVMVGKGIRAT--VVTYTSLIHALSMKGMVQETDRLFNDAV 351

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG-----FKIVEVM 626
            RG  PDL   N  + +                            +GG     F+I+  M
Sbjct: 352 RRGIRPDLFMYNALINS--------------------------HCTGGDMDRAFEIMGEM 385

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
            +K ++P   T+  +++ LC   R+  A
Sbjct: 386 EKKRITPDDVTYNTLMRGLCLLGRLDEA 413



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 27/218 (12%)

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           T++ +++    +GK  +A+E+ + M   N V     Y+ +I G C  G+++    +  +M
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPSPNAV----TYNTVIAGFCARGRVQAGIEIMREM 173

Query: 499 LSRG-CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
             RG   PD   Y+++I G C  G VE+A K+F+EML  E K +P+   YN L+   C Q
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLT-EGKVEPNAVMYNALIGGYCDQ 232

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
            N+  ++     M+DRG    + T N+F+  L                     F   R +
Sbjct: 233 GNLEVALRYRGEMVDRGVSMTVATYNLFVHTL---------------------FMEGRAA 271

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
               +VE M +K L+P   T+  ++   C+  + + A+
Sbjct: 272 EAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAM 309


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 134/408 (32%), Positives = 202/408 (49%), Gaps = 25/408 (6%)

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           +A    + P+  TFN VI  +CR+G +  A  + +++      P + TY +L+DG CK+ 
Sbjct: 181 SALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240

Query: 242 ---RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
               +    +LL EM   G  PT VTF VLING CKN     A ++ + M  +G   + V
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TYN+LI GLC +G +++ V L++ M      PNE+T+G ++ G  K G   D    +  M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            ER    +  IY+ LI G  + GK EDAM + + M +KG  PN   Y+ LI G  R G  
Sbjct: 361 TERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             A  +L EM   G  A+  TY+ L+      G+  KAV++  +M++     N + Y+ +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CL 536
           I G C+ G ++ A  + T+M     + +VV Y+  I   C  G ++EA  L NEML  CL
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
            P       TY  +                   MM++G  PD+  C +
Sbjct: 541 VPNG----ITYETIKEG----------------MMEKGYTPDIRGCTV 568



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 211/421 (50%), Gaps = 5/421 (1%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +    H    P+T + N ++  +     VD A + FR    R   PDIYT+ T++ GLC+
Sbjct: 144 LAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCR 203

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG---RAAKLVDNMFLKGCLPN 296
             +L +A  +  +++  G  P+  T+N LI+G CK G  G       L+  M   G  P 
Sbjct: 204 IGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPT 263

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VT+  LI+G C   N   AV + + M       + VTY ++I+GL   G+  +G +++ 
Sbjct: 264 AVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME 323

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            ME+     NE  +  ++ G  K+G   DA      M E+  +P+ V+Y+ LIDG  R+G
Sbjct: 324 EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLG 383

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K ++A  +   M   G + N  TY+ L+ GF  SG    A  +  +M +     + V Y+
Sbjct: 384 KMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           VLI  LC  G++R+A  +  +M   G +P+ + Y+++I G C+ G+++ A ++   M   
Sbjct: 444 VLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM--E 501

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
           + + + +V TYN+ +   C+   +  + DLLN M+D+   P+ +T       + EK   P
Sbjct: 502 KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTP 561

Query: 597 Q 597
            
Sbjct: 562 D 562



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 171/395 (43%), Gaps = 55/395 (13%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P+  + N L+ GL     +  A K   +   +   P+  T+NT+I GLC  G L KA  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              + A    P+  TY ++I+G  K G A +            +HV+             
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGN-----------MYHVD------------- 249

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
                    L K+M+E G  P  V +  LI+G C+      A  +  EM   G AA+  T
Sbjct: 250 --------MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+SL+ G    GK  + V++ ++M       NE+ +  ++ G C+ G + +A      M 
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            R  +PDVV Y+ +I G    G +E+A+ +   M   +    P+V TYN L+    +  +
Sbjct: 362 ERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMA--KKGISPNVTTYNCLITGFSRSGD 419

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
              +  LL+ M ++G + D+VT N+ + AL  K E  +                      
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRK---------------------A 458

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            K+++ M +  L P   T+  ++Q  C    I++A
Sbjct: 459 VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA 493


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 147/551 (26%), Positives = 265/551 (48%), Gaps = 49/551 (8%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
           Y+     +YS+++  + +   +    VL  M+R       ++F  +  +Y +A  + +A+
Sbjct: 203 YRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDAL 262

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           ++  T++     +  +   N+ ++V ++     +AL F   +   + + I+PN +T+N +
Sbjct: 263 KVL-TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERM---QVVGIVPNVVTYNCM 318

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD-G 257
           I+  C L  V+ AI+L  +M  + C PD  +Y T+M  LCKE R+ E   L+ +M  + G
Sbjct: 319 IRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHG 378

Query: 258 CFPTPVTFNVLI-----------------------------------NGLCKNGELGRAA 282
             P  VT+N LI                                   + LCK G +  A 
Sbjct: 379 LVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAK 438

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
            L++ M    C P+ VTY  +++G C  G +DKA  LL  M      PN V+Y  ++NG+
Sbjct: 439 DLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGM 495

Query: 343 VKLGRAVDGARVLMSM-EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
            + G++++ AR +M+M EE  +  N   YS ++ GL +EGK  +A  + ++M+ KG  P 
Sbjct: 496 CRTGKSLE-AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 554

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V  + L+  LCR G+  EA + + E +N GCA N   +++++ GF ++ +   A+ +  
Sbjct: 555 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLD 614

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           DM   N   +   Y+ L+  L + G++ EA  +  +ML +G  P  V Y ++IH  C  G
Sbjct: 615 DMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG 674

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            V++ + +  +M+      Q     YN ++  LC    +  +  LL  ++      D  T
Sbjct: 675 KVDDLVAILEKMI----SRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKT 730

Query: 582 CNIFLTALKEK 592
           C   +    +K
Sbjct: 731 CYALMEGYLKK 741



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 199/422 (47%), Gaps = 12/422 (2%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLF 141
           D   Y+ + H     D     +   +  +EK   ++K  +  I  A  K   + EA    
Sbjct: 382 DQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEA---- 437

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             +++E  C   V ++ +V+N   + G   +A +    +    H    PNT+++  ++  
Sbjct: 438 KDLINEMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK---PNTVSYTALLNG 494

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +CR G    A ++          P+  TY  +M GL +E +L EA  ++ EM + G FP 
Sbjct: 495 MCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPG 554

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
           PV  N+L+  LC++G    A K ++    KGC  N V + T+IHG C    LD A+S+LD
Sbjct: 555 PVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLD 614

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M       +  TY T+++ L K GR  +   ++  M  +        Y T+I    + G
Sbjct: 615 DMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG 674

Query: 382 KAEDAMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           K +D + + ++M+ +  C+    +Y+ +I+ LC +GK +EA+ +L +++     ++A T 
Sbjct: 675 KVDDLVAILEKMISRQKCR---TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTC 731

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
            +LM+G+ + G    A ++   M   N + +      L   L   GK+ EA  +  +++ 
Sbjct: 732 YALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVE 791

Query: 501 RG 502
           RG
Sbjct: 792 RG 793


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 155/512 (30%), Positives = 234/512 (45%), Gaps = 51/512 (9%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +H   LP     N +++ +      D+A +L+ EM       D Y+ C ++ GLC E  +
Sbjct: 216 EHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLV 275

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           ++ + L++     GC P  V +NVLI+G C+ G++GR   L+  M  KG LP  VTY TL
Sbjct: 276 EKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTL 335

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +  L  KG+L+K  SLL  M   +  PN   Y ++I+ L K   A     VL  M     
Sbjct: 336 MSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGC 395

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   +STLISGL +EG+ ++A +L ++       PN   Y++LI G C  G+   A  
Sbjct: 396 DPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASN 455

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L EM+  G   +  T+ +L+ G   +G+  +A+ + + MA    + +   Y+VLI GLC
Sbjct: 456 LLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLC 515

Query: 484 E------------------------------DGKLR-----EARMVWTQMLSRGCKPDVV 508
           +                              DG +R     EAR ++  M  +G  PDVV
Sbjct: 516 KKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVV 575

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y++MI G C  G + EA++  + M   +    PD FTY  L+    KQ NIS ++ LL 
Sbjct: 576 GYNAMIKGYCQFGMMNEAVECMSTM--RKVGRIPDEFTYTTLIGGYAKQGNISGALSLLC 633

Query: 569 SMMDRGCDPDLVT--------CNIFLTALKEKLEAPQDGTDFLNE------LAIRLFKRQ 614
            MM R C P++V         C +  T   E L    +             L   LFK+ 
Sbjct: 634 DMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKD 693

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
           +        E ML    SP   T   +V  LC
Sbjct: 694 KVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLC 725



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 229/441 (51%), Gaps = 22/441 (4%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV ++ ++++ + ++G   +     + +   +   + PN   +N VI  +C+      A+
Sbjct: 328 TVVTYGTLMSWLGRKGDLEKIASLLSEM---RERRLPPNVQIYNSVIDALCKCRSASQAL 384

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            + ++M    C+PD  T+ TL+ GLC+E R+ EA  LL E       P   ++  LI+G 
Sbjct: 385 VVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGF 444

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C  GE+  A+ L+  M  +G  P+ VT+  LIHGL + G + +A+ + ++M A + +P+ 
Sbjct: 445 CVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDA 504

Query: 333 VTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             Y  +I+GL K  + +  AR L+  M E+  H ++Y+Y+TLI G  +    ++A K+++
Sbjct: 505 NIYNVLISGLCK-KKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFE 563

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M +KG  P+ V Y+A+I G C+ G  +EA E +  M   G   + FTY++L+ G+ + G
Sbjct: 564 FMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQG 623

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
               A+ +  DM K  C  N V YS LI+G C+ G    A  ++  M S+G  P+V+ Y+
Sbjct: 624 NISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYT 683

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK------QSNISHSI- 564
            +I  L     V  A   F  ML    +  P+ +T + L+  LC        S+ S ++ 
Sbjct: 684 ILIGSLFKKDKVVRAAMYFEYMLL--NQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVN 741

Query: 565 --------DLLNSMMDRGCDP 577
                   D+  ++++  CDP
Sbjct: 742 LHGKGALLDIFRALVNDRCDP 762



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/461 (31%), Positives = 222/461 (48%), Gaps = 46/461 (9%)

Query: 167 EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
           EGL  + L+       A     +PN + +N++I   CR G V   I L  EM  +   P 
Sbjct: 272 EGLVEKGLKLIEARWGA---GCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPT 328

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
           + TY TLM  L ++  L++   LL EM+     P    +N +I+ LCK     +A  ++ 
Sbjct: 329 VVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLK 388

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL-------------------------- 320
            MF  GC P+ +T++TLI GLC +G + +A  LL                          
Sbjct: 389 QMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRG 448

Query: 321 DRMVASKCM---------PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           + +VAS  +         P+ VT+G +I+GLV  G+  +   V   M  R+   +  IY+
Sbjct: 449 EVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYN 508

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LISGL K+     A  L ++M+E+   P+  VY+ LIDG  R    DEA +I   M   
Sbjct: 509 VLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQK 568

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +   Y++++KG+ + G  ++AVE    M K   + +E  Y+ LI G  + G +  A
Sbjct: 569 GIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGA 628

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYN 548
             +   M+ R C+P+VVAYSS+I+G C  G  + A  LF  M     +SQ   P+V TY 
Sbjct: 629 LSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSM-----ESQGLFPNVITYT 683

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           IL+ +L K+  +  +      M+   C P+  T +  +T L
Sbjct: 684 ILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGL 724



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 214/492 (43%), Gaps = 56/492 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+      GD + +  +L  MR  +     + +  +  A  K     +A+ +   M
Sbjct: 331 TYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQM 390

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                C     +F+++++ + QEG   R  E    +       + PN  ++  +I   C 
Sbjct: 391 F-AGGCDPDAITFSTLISGLCQEG---RVQEAERLLRETTRWELNPNLSSYTSLIHGFCV 446

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A  L  EM  R   PD+ T+  L+ GL    ++ EA+L+ ++M      P    
Sbjct: 447 RGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANI 506

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NVLI+GLCK   L  A  L++ M  +   P++  Y TLI G     +LD+A  + + M 
Sbjct: 507 YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFME 566

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+ V Y  +I G  + G   +    + +M +     +E+ Y+TLI G  K+G   
Sbjct: 567 QKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNIS 626

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE---------------------- 422
            A+ L   MM++ C+PN V YS+LI+G C++G  D AE                      
Sbjct: 627 GALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILI 686

Query: 423 ------------EILFE-MINNGCAANAFTYSSLMKGFFES----------------GKG 453
                        + FE M+ N C+ N +T  SL+ G   S                GKG
Sbjct: 687 GSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKG 746

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
              ++I++ +  + C      Y+ +I  LC    L EA  +  +M ++G KPD   + S+
Sbjct: 747 -ALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSL 805

Query: 514 IHGLCNAGSVEE 525
           ++G C+ G   E
Sbjct: 806 LYGFCSVGKSRE 817



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 167/364 (45%), Gaps = 35/364 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
           TF +LI     +G     E +L R +   R +L  + I+  +     K  ++  A  L  
Sbjct: 471 TFGALIHGLVVAGQVS--EALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIE 528

Query: 143 TMVDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            M+++  H  + V  + ++++  I+      A + +  +   +   I P+ + +N +IK 
Sbjct: 529 EMLEQNVHPDKYV--YTTLIDGFIRNESLDEARKIFEFM---EQKGIHPDVVGYNAMIKG 583

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+ G+++ A++    M      PD +TY TL+ G  K+  +  A+ LL +M    C P 
Sbjct: 584 YCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPN 643

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            V ++ LING CK G+   A  L  +M  +G  PN +TY  LI  L  K  + +A    +
Sbjct: 644 VVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFE 703

Query: 322 RMVASKCMPNEVTYGTIINGL---------------VKL---GRAVDGARVLMS--MEER 361
            M+ ++C PN+ T  +++ GL               V L   G  +D  R L++   + R
Sbjct: 704 YMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPR 763

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               N  I+S  I  +  E     A+ L  +M  KG KP++  + +L+ G C VGK  E 
Sbjct: 764 NSAYNAIIFSLCIHNMLGE-----ALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREW 818

Query: 422 EEIL 425
             IL
Sbjct: 819 RTIL 822



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 28/272 (10%)

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS---SLMKGFFESGKGHKAVEIWK 461
           +SAL+  L R G+ D  +  L +M   G AA   T +   +L+  + ++G   KA E+ +
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 462 DMAKNNCVYNEVCYS-VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
              +++       ++  L+  L E  +  +AR ++ +ML+     D  +   M+ GLC  
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272

Query: 521 GSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           G VE+ LKL        C+     P+   YN+L++  C++ ++   I LL  M  +G  P
Sbjct: 273 GLVEKGLKLIEARWGAGCV-----PNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLP 327

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKI 622
            +VT    ++ L  K +  +  +  L+E+  R               L K +  S    +
Sbjct: 328 TVVTYGTLMSWLGRKGDLEKIAS-LLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVV 386

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           ++ M      P   T+  ++  LC+  R+Q A
Sbjct: 387 LKQMFAGGCDPDAITFSTLISGLCQEGRVQEA 418



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 54/275 (19%), Positives = 98/275 (35%), Gaps = 54/275 (19%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + ++I+ Y   G        +  MR+  R+  E ++  +   Y K   +  A+ L   M+
Sbjct: 577 YNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMM 636

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
               C+  V +++S++N   + G    A   +  +   +   + PN +T+ ++I ++ + 
Sbjct: 637 KR-RCQPNVVAYSSLINGYCKLGDTDAAECLFGSM---ESQGLFPNVITYTILIGSLFKK 692

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK-------------------------- 239
             V  A   F  M +  C P+ YT  +L+ GLC                           
Sbjct: 693 DKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIF 752

Query: 240 ------------------------ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
                                    N L EA+ L ++M   G  P   TF  L+ G C  
Sbjct: 753 RALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSV 812

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           G+      ++ N F +  L     Y  L     +K
Sbjct: 813 GKSREWRTILPNEFQRDELEVASRYKILFDQYVVK 847


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/416 (31%), Positives = 211/416 (50%), Gaps = 5/416 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A   Y  +V +    +LP+ +T + ++  +CR G    A  LFREM      P+  TYCT
Sbjct: 278 AFTLYEGMVRS---GVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCT 334

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
            +D L K  R++E++ LL EM   G     V +  +++ L K G++  A  ++ +     
Sbjct: 335 FIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDN 394

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN VTY  L+   C  GN+D A  +L +M      PN VT+ +I+NGLVK G     A
Sbjct: 395 ITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAA 454

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
             +  M++     N   Y TLI G FK    E A+ +++ M+ +G + N  +  +L++GL
Sbjct: 455 GYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGL 514

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            + G  +EAE +  +M   G   +   Y++LM G F++G    A+++ +++ + N   + 
Sbjct: 515 RKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDA 574

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+V I+ LC  GK  EA+    +M + G +PD   Y++MI   C  G+  +ALKL NE
Sbjct: 575 VVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNE 634

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           M     K  P++ TY  L+  L +   +  +  LLN M   G  P  +T    L A
Sbjct: 635 MKWSSIK--PNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA 688



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 152/578 (26%), Positives = 264/578 (45%), Gaps = 82/578 (14%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + +L+  +  SGD  +   V  RM+    E  VV   + I     Y K   +EEA  L+ 
Sbjct: 227 YNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLI---GEYCKMKRIEEAFTLYE 283

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            MV        V + +++++ + ++G +  A   +  +     + + PN +T+   I ++
Sbjct: 284 GMVRSGVLPDVV-TLSALVDGLCRDGRFSEAYALFREM---DKIGVAPNHVTYCTFIDSL 339

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            ++  V+ ++ L  EM  R    D+  Y T+MD L KE +++EA  +L     D   P  
Sbjct: 340 AKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNC 399

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+ VL++  C+ G +  A +++  M  K   PN VT++++++GL  +G + KA   + +
Sbjct: 400 VTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRK 459

Query: 323 MVASKCMPNEVTYGTII-----------------------------------NGLVKLGR 347
           M  S   PN VTYGT+I                                   NGL K G 
Sbjct: 460 MKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGN 519

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +   +   M ER   ++   Y+TL+ GLFK G    A+K+ +++ME+   P+ VVY+ 
Sbjct: 520 IEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNV 579

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
            I+ LCR+GK  EA+  L EM N G   +  TY++++      G   KA+++  +M  ++
Sbjct: 580 FINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSS 639

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP---------------------- 505
              N + Y+ L+ GL E G + +A+ +  +M S G  P                      
Sbjct: 640 IKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVIL 699

Query: 506 -------------DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
                        D+  Y++++H LC  G   +A  + +EML       PD  T+N L+ 
Sbjct: 700 EVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGR--GIAPDTITFNALIL 757

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
             CK S++ ++      M+ +G  P++ T N  L  L+
Sbjct: 758 GHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLE 795



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 221/461 (47%), Gaps = 25/461 (5%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   + P+ +T   +I   C++  ++ A  L+  M      PD+ T   L+DGLC++ R 
Sbjct: 251 KADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRF 310

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  L  EM   G  P  VT+   I+ L K   +  +  L+  M  +G   + V Y T+
Sbjct: 311 SEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTV 370

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERK 362
           +  L  +G +++A  +L   ++    PN VTY  +++   + G  +DGA ++L+ MEE+ 
Sbjct: 371 MDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGN-IDGAEQMLLQMEEKS 429

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              N   +S++++GL K G    A    ++M + G  PN V Y  LIDG  +    + A 
Sbjct: 430 VSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAAL 489

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           ++  +M++ G  AN F   SL+ G  ++G   +A  ++KDM +   + + V Y+ L+ GL
Sbjct: 490 DVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGL 549

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            + G +  A  V  +++ R   PD V Y+  I+ LC  G   EA     EM       +P
Sbjct: 550 FKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEM--RNTGLEP 607

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           D  TYN +++A C++ N S ++ LLN M      P+L+T    +  L E     +     
Sbjct: 608 DQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEA-GVVEKAKYL 666

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           LNE+A         S GF           +P   T+ RV+Q
Sbjct: 667 LNEMA---------SAGF-----------TPTPLTYRRVLQ 687



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 222/489 (45%), Gaps = 43/489 (8%)

Query: 139 RLFHTMVDEFHCKRTVK----SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           RL   ++ E  CKR V     + ++ L  + + GL   A      +V  + ++ L   + 
Sbjct: 134 RLAPPVLSEM-CKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGL-GVVG 191

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N +I   C++  +  A+ +   M  +    D+  Y TL+ G       D A  + + M+
Sbjct: 192 WNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMK 251

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            DG  P+ VT   LI   CK   +  A  L + M   G LP+ VT + L+ GLC  G   
Sbjct: 252 ADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFS 311

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A +L   M      PN VTY T I+ L K+ R  +   +L  M  R   ++  +Y+T++
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVM 371

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM------ 428
             L KEGK E+A  + +  +     PN V Y+ L+D  CR G  D AE++L +M      
Sbjct: 372 DRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVS 431

Query: 429 -------------INNGC----------------AANAFTYSSLMKGFFESGKGHKAVEI 459
                        +  GC                A N  TY +L+ GFF+      A+++
Sbjct: 432 PNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDV 491

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           ++DM       N      L++GL ++G + EA  ++  M  RG   D V Y++++ GL  
Sbjct: 492 YRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFK 551

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G++  ALK+  E+  +E    PD   YN+ +N LC+    S +   L  M + G +PD 
Sbjct: 552 TGNMPAALKVGQEL--MERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQ 609

Query: 580 VTCNIFLTA 588
            T N  ++A
Sbjct: 610 ATYNTMISA 618



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 237/531 (44%), Gaps = 47/531 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L+  +  +G+    E +L +M  +       +F  I     K   + +A      M
Sbjct: 401 TYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKM 460

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D       V ++ ++++   +      AL+ Y  ++   H  +  N    + ++  + +
Sbjct: 461 KDSGIAPNVV-TYGTLIDGFFKCQGQEAALDVYRDML---HEGVEANNFIVDSLVNGLRK 516

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A  LF++M  R    D   Y TLMDGL K   +  A+ +  E+      P  V 
Sbjct: 517 NGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVV 576

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NV IN LC+ G+   A   +  M   G  P++ TYNT+I   C +GN  KA+ LL+ M 
Sbjct: 577 YNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMK 636

Query: 325 ASKCMPNEVTYGTIINGLVKLG----------------------------RAVDGAR--- 353
            S   PN +TY T++ GL++ G                            +A  G+R   
Sbjct: 637 WSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPY 696

Query: 354 VLMSMEE----RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           V++ + E       H +  +Y+TL+  L   G    A  +  +M+ +G  P+T+ ++ALI
Sbjct: 697 VILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALI 756

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            G C+    D A     +M++ G + N  T+++L+ G   +G+  +A  +  +M K    
Sbjct: 757 LGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLE 816

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N + Y +L+ G  +     EA  ++ +M+S+G  P    Y+S+I     AG + +A +L
Sbjct: 817 PNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKEL 876

Query: 530 FNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           F+EM     L   S     TY+ILLN   K  N +    LL  M + G  P
Sbjct: 877 FSEMKRRGVLHTSS-----TYDILLNGWSKLRNGTEVRILLKDMKELGFKP 922



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 5/379 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N  +N + + G +  A  F   + N     + P+  T+N +I   CR G    A++L  
Sbjct: 577 YNVFINCLCRLGKFSEAKSFLKEMRNT---GLEPDQATYNTMISAQCREGNTSKALKLLN 633

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM   + +P++ TY TL+ GL +   +++A  LL+EM   G  PTP+T+  ++   C   
Sbjct: 634 EMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA-CSGS 692

Query: 277 ELGRAAKLVDNMFLKGCLPNEVT-YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
                   V  + +   L  ++T YNTL+H LC  G   KA  +LD M+     P+ +T+
Sbjct: 693 RSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITF 752

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +I G  K     +       M  +    N   ++TL+ GL   G+  +A  +  +M +
Sbjct: 753 NALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKK 812

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G +PN + Y  L+ G  +     EA  +  EM++ G    A TY+SL+  F ++G  ++
Sbjct: 813 MGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQ 872

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A E++ +M +   ++    Y +L++G  +     E R++   M   G KP     SSM  
Sbjct: 873 AKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSR 932

Query: 516 GLCNAGSVEEALKLFNEML 534
                G   EA +L   + 
Sbjct: 933 AFSKPGMTWEARRLLKTLF 951



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 148/345 (42%), Gaps = 38/345 (11%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++++   +EG   +AL+  N +   K  +I PN +T+  ++  +   G+V+ A  L 
Sbjct: 611 TYNTMISAQCREGNTSKALKLLNEM---KWSSIKPNLITYTTLVVGLLEAGVVEKAKYLL 667

Query: 216 REMPVRNCEP-----------------------------------DIYTYCTLMDGLCKE 240
            EM      P                                   DI  Y TL+  LC  
Sbjct: 668 NEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCH 727

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
               +A ++LDEM   G  P  +TFN LI G CK+  L  A      M  +G  PN  T+
Sbjct: 728 GMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATF 787

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTL+ GL   G + +A +++  M      PN +TY  ++ G  K    V+  R+   M  
Sbjct: 788 NTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVS 847

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           + F      Y++LIS   K G    A +L+ +M  +G    +  Y  L++G  ++    E
Sbjct: 848 KGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTE 907

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
              +L +M   G   +  T SS+ + F + G   +A  + K + K
Sbjct: 908 VRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/322 (23%), Positives = 128/322 (39%), Gaps = 60/322 (18%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE------- 422
           Y+  ++GL ++G    A  +  +M ++G   + V  S  + GL R G   EA        
Sbjct: 120 YNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAEMLV 179

Query: 423 ------------------------------EILFEMINNGCAANAFTYSSLMKGFFESGK 452
                                          ++  M   G + +   Y++L+ GFF SG 
Sbjct: 180 RGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGD 239

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A E+ + M  +    + V ++ LI   C+  ++ EA  ++  M+  G  PDVV  S+
Sbjct: 240 ADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSA 299

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           ++ GLC  G   EA  LF EM  +     P+  TY   +++L K   ++ S+ LL  M+ 
Sbjct: 300 LVDGLCRDGRFSEAYALFREMDKI--GVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVS 357

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
           RG   DLV   ++ T +                   RL K  +      ++   L   ++
Sbjct: 358 RGVAMDLV---MYTTVMD------------------RLGKEGKIEEAKDVLRHALSDNIT 396

Query: 633 PQTSTWERVVQELCRPKRIQAA 654
           P   T+  +V   CR   I  A
Sbjct: 397 PNCVTYTVLVDAHCRAGNIDGA 418



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 18/200 (9%)

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           + V Y++ + GL E G  R A  V ++M  RG   D V  S+ + GL   G V EA  L 
Sbjct: 116 DTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALA 175

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA-- 588
             ++         V  +N L++  CK  +++ ++ ++  M  +G   D+V  N  +    
Sbjct: 176 EMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFF 235

Query: 589 ----------LKEKLEAPQDGTD----FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
                     + E+++A  DG +        L     K +R    F + E M++  + P 
Sbjct: 236 YSGDADAAWEVAERMKA--DGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPD 293

Query: 635 TSTWERVVQELCRPKRIQAA 654
             T   +V  LCR  R   A
Sbjct: 294 VVTLSALVDGLCRDGRFSEA 313


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/435 (29%), Positives = 220/435 (50%), Gaps = 5/435 (1%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           R   S+N+VL  + ++G    AL     + +   +   PN +++  +++ +C       A
Sbjct: 54  RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQA 113

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           + L R M      PD+ TY TL+ GLC    +D AV LL+EM   G  P  V ++ L++G
Sbjct: 114 VGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHG 173

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            CK G      K+ + M  +G  P+ V Y  LI  LC  G + KA  ++D M      PN
Sbjct: 174 YCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPN 233

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY  +IN + K G   +   +  +M E+    +   Y+TLI+GL    + ++AM L +
Sbjct: 234 VVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLE 293

Query: 392 QMM--EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +MM  E   +P+ + ++++I GLC++G   +A ++   M  NGC  N   ++ L+ G   
Sbjct: 294 EMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLR 353

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
             K  KA+E+  +MA +    +   YS+LI+G C+  ++  A    ++M  +G +P+ V 
Sbjct: 354 VHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVH 413

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y  ++  +C+ G + +A  LFNEM   +   + D   Y+ +++   K      + + L  
Sbjct: 414 YIPLLKAMCDQGMMGQARDLFNEM---DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKD 470

Query: 570 MMDRGCDPDLVTCNI 584
           M+D G  PD VT +I
Sbjct: 471 MIDEGLIPDAVTYSI 485



 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 223/460 (48%), Gaps = 44/460 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  + +A        +A+ L  +M D    +  V ++ +++  +        A+E  N 
Sbjct: 96  SYTTLMRALCADRRAAQAVGLLRSMQD-CGVRPDVVTYGTLIRGLCDAADVDTAVELLNE 154

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  +    I PN + ++ ++   C+ G  ++  ++F EM  R  EPD+  Y  L+D LC+
Sbjct: 155 MCES---GIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCR 211

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             ++ +A  ++D M   G  P  VT+NVLIN +CK G +  A  L  NM  KG  P+ VT
Sbjct: 212 HGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVT 271

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVA--SKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           YNTLI GL     +D+A++LL+ M+   ++  P+ +T+ ++I+GL K+G      +V   
Sbjct: 272 YNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAM 331

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M E     N   ++ LI GL +  K + AM+L  +M   G +P++  YS LI+G C++ +
Sbjct: 332 MAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQ 391

Query: 418 PDEAEEILFEMINNG----------------------------------CAANAFTYSSL 443
            + AE  L EM + G                                  C  +A  YS++
Sbjct: 392 VERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTM 451

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G F+SG+   A E  KDM     + + V YS+ I+   + G L  A  V  QM + G 
Sbjct: 452 IHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGF 511

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPK 539
            PDV  + S+I G    G  E+ L+L  EM    + L+PK
Sbjct: 512 VPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPK 551



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 238/477 (49%), Gaps = 10/477 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDE--FHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           S+  +  A  +   ++ A+ L   M  E     +    S+ +++  +  +    RA +  
Sbjct: 58  SYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCAD---RRAAQAV 114

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
             + + +   + P+ +T+  +I+ +C    VD A++L  EM     EP++  Y  L+ G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
           CK  R +    + +EM   G  P  V +  LI+ LC++G++ +AA+++D M  +G  PN 
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL-- 355
           VTYN LI+ +C +G++ +A+ L   M      P+ VTY T+I GL  +    +   +L  
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
           M   E +   +   ++++I GL K G    A+++   M E GC+ N V ++ LI GL RV
Sbjct: 295 MMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRV 354

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            K  +A E++ EM ++G   ++FTYS L+ GF +  +  +A     +M         V Y
Sbjct: 355 HKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHY 414

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
             L+  +C+ G + +AR ++ +M  R CK D  AYS+MIHG   +G  + A +   +M+ 
Sbjct: 415 IPLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMI- 472

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
            +    PD  TY+I +N   K  +++ +  +L  M   G  PD+   +  +     K
Sbjct: 473 -DEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAK 528



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 187/364 (51%), Gaps = 28/364 (7%)

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRM-----VASKCMPNEVTYGTIINGLVKLGRAVD 350
           + V+YNT++  LC +G LD A+ LL  M     +AS+  PN ++Y T++  L    RA  
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASR--PNAISYTTLMRALCADRRAAQ 112

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              +L SM++     +   Y TLI GL      + A++L  +M E G +PN VVYS L+ 
Sbjct: 113 AVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLH 172

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G C+ G+ +   ++  EM   G   +   Y++L+      GK  KA  +   M +     
Sbjct: 173 GYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP 232

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N V Y+VLI+ +C++G +REA  +   M  +G +PDVV Y+++I GL +   ++EA+ L 
Sbjct: 233 NVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
            EM+  E + +PD+ T+N +++ LCK   +  ++ +   M + GC  +LV  N+ +  L 
Sbjct: 293 EEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL- 351

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                            +R+ K ++     ++++ M    L P + T+  ++   C+ ++
Sbjct: 352 -----------------LRVHKVKK---AMELMDEMASSGLQPDSFTYSILINGFCKMRQ 391

Query: 651 IQAA 654
           ++ A
Sbjct: 392 VERA 395



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 199/427 (46%), Gaps = 26/427 (6%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +E  + ++  ++D       VK    V++++ + GL                    PN +
Sbjct: 195 IEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE-------------------PNVV 235

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N++I ++C+ G V  A+ L + M  +  +PD+ TY TL+ GL     +DEA+ LL+EM
Sbjct: 236 TYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM 295

Query: 254 QVDGCFPTP--VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
                   P  +TFN +I+GLCK G + +A ++   M   GC  N V +N LI GL    
Sbjct: 296 MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVH 355

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            + KA+ L+D M +S   P+  TY  +ING  K+ +       L  M  +        Y 
Sbjct: 356 KVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYI 415

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            L+  +  +G    A  L+ +M ++ CK +   YS +I G  + G+   AEE L +MI+ 
Sbjct: 416 PLLKAMCDQGMMGQARDLFNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDE 474

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +A TYS  +  F +SG    A  + K M  +  V +   +  LI G    G   + 
Sbjct: 475 GLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKI 534

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK-SQPDVFTYNIL 550
             +  +M ++    D    S+++  L   G+  E  KL   +   + + S+ DV + + +
Sbjct: 535 LELTREMTAKDVALDPKIISTIVTSL---GASIEGQKLLQSLPGFDTEISKGDVISPHDV 591

Query: 551 LNALCKQ 557
           +N L K 
Sbjct: 592 MNMLQKH 598



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 104/224 (46%), Gaps = 26/224 (11%)

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY---NEVCYSVLIHGLCEDGKLREAR 492
           +A +Y++++      G    A+ + + M+    +    N + Y+ L+  LC D +  +A 
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +   M   G +PDVV Y ++I GLC+A  V+ A++L NEM   E   +P+V  Y+ LL+
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMC--ESGIEPNVVVYSCLLH 172

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
             CK         +   M  RG +PD+V      TAL + L                  +
Sbjct: 173 GYCKTGRWESVGKVFEEMSGRGIEPDVV----MYTALIDSL-----------------CR 211

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             +     +++++M ++ L P   T+  ++  +C+   ++ A++
Sbjct: 212 HGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALD 255


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 245/503 (48%), Gaps = 27/503 (5%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++KS N +++ +++    H++   ++ +       +L +  T+   I   C+ G +D A+
Sbjct: 205 SLKSCNFLMSSLVKSNELHKSFRVFDAMCRG---GVLIDVYTYATAINAYCKGGKIDEAV 261

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            LF +M      P++ TY  L+DGLCK  RL+EA++    M  +   P+ VT+ +L+NGL
Sbjct: 262 GLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGL 321

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            K  +   A  ++  M+ KG  PNE  +N LI G   KGN+D A+ + D M      PN 
Sbjct: 322 VKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNA 381

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VT+ T++ G  +  +     +VL  +      VNE   S ++  L K  K + A+K+ K 
Sbjct: 382 VTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKA 441

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYSSLMKGFFESG 451
           ++ +  K N  + + L+ GLC+ GK  EA ++ F + +  G AAN  T ++L+ G  E G
Sbjct: 442 LLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERG 501

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              +   + K+M +   V + + Y+ LI G C+ GK+ EA  +  +M+ +G KPD   Y+
Sbjct: 502 NMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYN 561

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            ++ GL + G +++  ++ +E    +    P+++TY ++L   C    I +++ L N ++
Sbjct: 562 FLMKGLADKGKMDDVGRVLHE--AKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLV 619

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
               +   V  NI + A                       K    +  FK+ + M    +
Sbjct: 620 YNKVELSYVVYNILIAAHS---------------------KAGNFTEAFKLRDAMRSSNI 658

Query: 632 SPQTSTWERVVQELCRPKRIQAA 654
            P   T+  ++  +C    ++ A
Sbjct: 659 HPTIFTYSSIIHGMCCNDLVEEA 681



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 215/447 (48%), Gaps = 24/447 (5%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A   F     +   P + +   LM  L K N L ++  + D M   G      T+   IN
Sbjct: 190 AFDTFMLFTSKGVFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAIN 249

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
             CK G++  A  L   M   G LPN VTYN LI GLC  G L++A+    RMV +K  P
Sbjct: 250 AYCKGGKIDEAVGLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNP 309

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + VTYG ++NGLVK  +  +   VL+ M  + F  NE++++ LI G  ++G  +DA+++ 
Sbjct: 310 SLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVR 369

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M  KG KPN V ++ L+ G CR  + ++AE++L  +++N  + N    S ++    +S
Sbjct: 370 DDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKS 429

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS-RGCKPDVVA 509
            K   A++I K +   N   N+   ++L+ GLC+ GK  EA  +W ++   +G   +   
Sbjct: 430 SKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTT 489

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
            +++++GLC  G++EE   +  EM  +E     D  +YN L+   CK   I  +  L   
Sbjct: 490 SNALLYGLCERGNMEEVFPVCKEM--VERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEK 547

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQK 629
           MM +G  PD  T N  +  L +K +    G         R+    +  G           
Sbjct: 548 MMKQGFKPDTYTYNFLMKGLADKGKMDDVG---------RVLHEAKDHG----------- 587

Query: 630 FLSPQTSTWERVVQELCRPKRIQAAIN 656
            + P   T+  +++  C   RI  A++
Sbjct: 588 -VVPNIYTYALMLEGYCNADRIDNAVS 613



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 146/565 (25%), Positives = 251/565 (44%), Gaps = 63/565 (11%)

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           AY K   ++EA+ LF  M  E      V ++N++++ + + G    AL F   +V  K  
Sbjct: 250 AYCKGGKIDEAVGLFLKM-GEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENK-- 306

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            + P+ +T+ +++  + +    D A  +  EM  +   P+ + +  L+DG  ++  +D+A
Sbjct: 307 -VNPSLVTYGILVNGLVKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDA 365

Query: 247 VLLLDEMQVDGCFPTPVTFNVLING----------------------------------- 271
           + + D+M + G  P  VT N L+ G                                   
Sbjct: 366 LRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHL 425

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP- 330
           LCK+ +   A K+V  + L+    N+     L+ GLC  G   +A+ L  R+   K +  
Sbjct: 426 LCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAA 485

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N  T   ++ GL + G   +   V   M ER   ++   Y+TLI G  K GK E+A KL 
Sbjct: 486 NTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLK 545

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           ++MM++G KP+T  Y+ L+ GL   GK D+   +L E  ++G   N +TY+ +++G+  +
Sbjct: 546 EKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNA 605

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            +   AV ++  +  N    + V Y++LI    + G   EA  +   M S    P +  Y
Sbjct: 606 DRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTY 665

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           SS+IHG+C    VEEA  +F EM        P+VF Y  L+   CK   +     +L  M
Sbjct: 666 SSIIHGMCCNDLVEEAKGIFEEMR--NEGLMPNVFCYTALIGGYCKLGQMDQIESILQEM 723

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
                 P+ +T  I +     K+   ++ T  LNE                    M+   
Sbjct: 724 TSNCIQPNKITYTIMIDGYC-KMGNTKEATKLLNE--------------------MIANG 762

Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
           +SP T T+  + +  C+   ++  +
Sbjct: 763 ISPDTVTYTVLQKGYCKENELEETL 787



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/411 (25%), Positives = 201/411 (48%), Gaps = 11/411 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T  +L+Q +  +   +  E VL  +      V E +  ++     K+   + A+++   +
Sbjct: 383 THNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKAL 442

Query: 145 VDEFHCKRTVKSFNSVLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +      R +K  +S+L +++    + G +  A++ +  + + K   +  NT T N ++ 
Sbjct: 443 L-----LRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKK--GLAANTTTSNALLY 495

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C  G ++    + +EM  R    D  +Y TL+ G CK  +++EA  L ++M   G  P
Sbjct: 496 GLCERGNMEEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKP 555

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T+N L+ GL   G++    +++      G +PN  TY  ++ G C    +D AVSL 
Sbjct: 556 DTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLF 615

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           +++V +K   + V Y  +I    K G   +  ++  +M     H   + YS++I G+   
Sbjct: 616 NKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCN 675

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
              E+A  ++++M  +G  PN   Y+ALI G C++G+ D+ E IL EM +N    N  TY
Sbjct: 676 DLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITY 735

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           + ++ G+ + G   +A ++  +M  N    + V Y+VL  G C++ +L E 
Sbjct: 736 TIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEET 786



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 164/343 (47%), Gaps = 1/343 (0%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQL-FREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           NI  N     L++  +C+ G    AI L FR    +    +  T   L+ GLC+   ++E
Sbjct: 446 NIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEE 505

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
              +  EM   G     +++N LI G CK+G++  A KL + M  +G  P+  TYN L+ 
Sbjct: 506 VFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMK 565

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GL  KG +D    +L        +PN  TY  ++ G     R  +   +   +   K  +
Sbjct: 566 GLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVEL 625

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +  +Y+ LI+   K G   +A KL   M      P    YS++I G+C     +EA+ I 
Sbjct: 626 SYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIF 685

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM N G   N F Y++L+ G+ + G+  +   I ++M  N    N++ Y+++I G C+ 
Sbjct: 686 EEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKM 745

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           G  +EA  +  +M++ G  PD V Y+ +  G C    +EE L+
Sbjct: 746 GNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQ 788


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 221/414 (53%), Gaps = 14/414 (3%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQL-FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           + +TF  ++K +C      +A+ +  R M    C PD+++Y  L+ GLC ENR  EA+ L
Sbjct: 126 DAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALEL 185

Query: 250 LDEMQVD---GCFPTPVTFNVLINGLCKNG--------ELGRAAKLVDNMFLKGCLPNEV 298
           L  M  D   G  P  V++N ++NG  K G         + +A ++++ M   G +P+ +
Sbjct: 186 LHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCM 245

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TYN+++HG C  G   +A+  L +M +    PN VTY +++N L K GR+ +  ++  SM
Sbjct: 246 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 305

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +R    +   Y TL+ G  KEG+  ++ KL+  M+  G KP+ + Y+ LIDG C  GK 
Sbjct: 306 TKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 365

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           DEA ++L  M++ G   +  TY +L+ G+    +   A+ ++K+M  +    N + Y+++
Sbjct: 366 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 425

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           + GL    +   A+ ++  +   G + ++  Y+ ++HGLC     +EAL++F   LCL  
Sbjct: 426 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN-LCLT- 483

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
             Q +  T+NI++ AL K   +  + DL  +    G  PD+ T ++    L E+
Sbjct: 484 DLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQ 537



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 213/457 (46%), Gaps = 22/457 (4%)

Query: 85  TFYSLIQHY-ANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           TF  L++   A+     ++++VL RM     +    S+  + K     +  +EA+ L H 
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 144 MVDE--FHCKRTVKSFNSVLNVIIQEGL--------YHRALEFYNHIVNAKHMNILPNTL 193
           M D+        V S+N+VLN   +EG+          +A+E  N +V      ++P+ +
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKN---GVMPDCM 245

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N ++   C  G    AI   ++M     EP++ TY +LM+ LCK  R  EA  + D M
Sbjct: 246 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 305

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P   T+  L+ G CK G +  + KL D M   G  P+ +TYNTLI G CL G +
Sbjct: 306 TKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 365

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A  LL  MV+    P+ VTYGT+ING  ++ R  D   +   M       N   Y+ +
Sbjct: 366 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 425

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           + GLF   +   A +L+  + + G +     Y+ ++ GLC+    DEA      M  N C
Sbjct: 426 LQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEA----LRMFQNLC 481

Query: 434 AAN----AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             +      T++ ++    + G+  +A +++   + N  V +   YS++   L E G L 
Sbjct: 482 LTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLE 541

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
           E   ++  M   GC  D    +S++  L   G +  A
Sbjct: 542 ELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 219/452 (48%), Gaps = 10/452 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + K         +A+ +    + E  C   V S+N++L  +  E     ALE  + 
Sbjct: 129 TFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHM 188

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGL--------VDNAIQLFREMPVRNCEPDIYTYC 231
           + + +     P+ +++N V+    + G+        +D A+++   M      PD  TY 
Sbjct: 189 MADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYN 248

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           +++ G C   +  EA+  L +M+ DG  P  VT++ L+N LCKNG    A K+ D+M  +
Sbjct: 249 SILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKR 308

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+  TY TL+ G C +G + ++  L D MV     P+ +TY T+I+G    G+  + 
Sbjct: 309 GLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEA 368

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            ++L SM       +   Y TLI+G  +  + +DA+ L+K+M+  G  PN + Y+ ++ G
Sbjct: 369 TKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQG 428

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L    +   A+E+   +  +G      TY+ ++ G  ++    +A+ +++++   +    
Sbjct: 429 LFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLE 488

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
              ++++I  L + G++ EA+ ++    + G  PDV  YS M   L   GS+EE   LF 
Sbjct: 489 TRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFL 548

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            M   E     D    N ++  L ++ +I+ +
Sbjct: 549 SM--EENGCSADSRMLNSIVRKLLQRGDITRA 578



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 72/339 (21%), Positives = 153/339 (45%), Gaps = 22/339 (6%)

Query: 58  NAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSG---DFKSLEMVLYRMRREKR 114
           N +S +  + +IF+S  K G  +   +T+ +L+Q +   G   + + L  ++ R+  +  
Sbjct: 292 NGRSTE--ARKIFDSMTKRG-LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPD 348

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           ++   + I      GK   ++EA +L  +MV     K  + ++ +++N   +      AL
Sbjct: 349 IITYNTLIDGCCLAGK---MDEATKLLASMV-SVGVKPDIVTYGTLINGYCRVSRMDDAL 404

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
             +  +V++    + PN +T+N++++ +        A +L+  +     + ++ TY  ++
Sbjct: 405 ALFKEMVSS---GVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 461

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            GLCK N  DEA+ +   + +        TFN++I  L K G +  A  L       G +
Sbjct: 462 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 521

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+  TY+ +   L  +G+L++   L   M  + C  +     +I+  L++ G        
Sbjct: 522 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 581

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           L  ++E+ F +     S L+         E +  +W+Q+
Sbjct: 582 LFMIDEKHFSLEASTASFLL---------ESSPIVWEQI 611


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 207/404 (51%), Gaps = 9/404 (2%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            + P+  T+  +IK +CR G +D A  +  E+     +P + TY  LMD LCK  R++EA
Sbjct: 206 TVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEA 265

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L   M      P+ VTF +LI+GL +  + G    ++  M   G  PNEV YN +I  
Sbjct: 266 FRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGW 325

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C KG+  +A+ L D MV+       VTY  I   L K G      ++L  M      V+
Sbjct: 326 HCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVH 385

Query: 367 EYIYSTLIS-GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
             +++++++  L   G+ +  ++L ++M+ +  KPN  + +A I  LC+ GK +EA EI 
Sbjct: 386 CSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIW 445

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
           F+++  G   N  T ++L+ G  +     +A ++ K M  +    + + Y+++I G C+ 
Sbjct: 446 FQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKA 505

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---P 542
            K+ EA  +   M+ RG KPD+  ++  +H  CN G VEE L L ++M     KS+   P
Sbjct: 506 SKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQM-----KSEGLKP 560

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           D+ TY  +++  CK  ++  + + L  +M  G  P+ V  N  +
Sbjct: 561 DIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALI 604



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/469 (27%), Positives = 229/469 (48%), Gaps = 6/469 (1%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           K+   + +A G    ++ A ++F  M D       V ++ +++  + + G    A   + 
Sbjct: 176 KTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAA---FA 232

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +   +   I P  +T+N+++  +C+ G V+ A +L   M      P I T+  L+ GL 
Sbjct: 233 MLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLA 292

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           +  +  E   +L EMQ  G  P  V +N +I   C+ G    A KL D M  KG     V
Sbjct: 293 RGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVV 352

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN-GLVKLGRAVDGARVLMS 357
           TYN +   LC +G ++ A  +LD M+ +  M +   + +++   L   GR     R++  
Sbjct: 353 TYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIRE 412

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M  R    N+ + +  I  L K GK E+A ++W Q++ KG   N    +ALI GLC+   
Sbjct: 413 MLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNN 472

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             EA ++L  M+N+G   +  TY+ +++G  ++ K  +A+++  DM K     +   +++
Sbjct: 473 MKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNI 532

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
            +H  C  GK+ E   +  QM S G KPD+V Y ++I G C A  + +A +   E+  ++
Sbjct: 533 FLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTEL--MK 590

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
              +P+   YN L+    +  NIS +I +L++M   G  P  VT N  +
Sbjct: 591 NGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLM 639



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/556 (25%), Positives = 247/556 (44%), Gaps = 48/556 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I+    +G+  +   +L  +RR        ++  +  A  K+  VEEA RL   M
Sbjct: 213 TYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 272

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V E   + ++ +F  +++ + +   +    E    +   +   I PN + +N +I   CR
Sbjct: 273 V-EGRVRPSIVTFGILISGLARGQQFG---EVGAVLQEMQGFGITPNEVIYNEMIGWHCR 328

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF----- 259
            G    A++LF EM  +  +  + TY  +   LCKE  ++ A  +LDEM + G       
Sbjct: 329 KGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSL 388

Query: 260 -------------------------------PTPVTFNVLINGLCKNGELGRAAKLVDNM 288
                                          P        I  LCK+G+   AA++   +
Sbjct: 389 FNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQV 448

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             KG   N  T N LIHGLC   N+ +A  +L  MV S    + +TY  +I G  K  + 
Sbjct: 449 LGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM 508

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +  ++   M +R F  + + ++  +      GK E+ + L  QM  +G KP+ V Y  +
Sbjct: 509 DEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTI 568

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           IDG C+     +A E L E++ NG   NA  Y++L+ G+  +G    A+ I   M  N  
Sbjct: 569 IDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGI 628

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
               V Y+ L++ +C  G + E + V+ Q + +  +  V+ Y+ +I G C  G ++EA+ 
Sbjct: 629 QPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVM 688

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT- 587
            F EM        P+  TY  L+ A  K  N   +  L + M+  G  PD V+ N  ++ 
Sbjct: 689 YFKEMH--SRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISG 746

Query: 588 -----ALKEKLEAPQD 598
                +L + +E+P +
Sbjct: 747 FCEVDSLDKMVESPAE 762



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/424 (30%), Positives = 211/424 (49%), Gaps = 9/424 (2%)

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL---GLVDNAIQLFREMPVRNCEP 225
           L  R L F    V A  +     T T +L+++        G +  A   F E+  R   P
Sbjct: 114 LVSRLLRFNPLSVAAAAIADSHCTATADLLVRACLNSPAPGSLSRAADAFLELSARGASP 173

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG--CFPTPVTFNVLINGLCKNGELGRAAK 283
            I T   L++ L    +LD A  +  EM+ DG    P   T+  +I  LC+ GE+  A  
Sbjct: 174 SIKTCSILVEALGCGGQLDVARKVFGEMR-DGKTVAPDVHTYTAMIKALCRAGEIDAAFA 232

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           ++  +   G  P  VTYN L+  LC  G +++A  L  RMV  +  P+ VT+G +I+GL 
Sbjct: 233 MLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLA 292

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           +  +  +   VL  M+      NE IY+ +I    ++G   +A+KL+ +M+ KG K   V
Sbjct: 293 RGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVV 352

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE-SGKGHKAVEIWKD 462
            Y+ +   LC+ G+ + AE+IL EM+  G   +   ++S++      +G+    + + ++
Sbjct: 353 TYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIRE 412

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M       N+   +  I  LC+ GK  EA  +W Q+L +G   +V   +++IHGLC   +
Sbjct: 413 MLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNN 472

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           ++EA K+   M  +    + D  TYNI++   CK S +  +I L + M+ RG  PDL T 
Sbjct: 473 MKEATKVLKAM--VNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTF 530

Query: 583 NIFL 586
           NIFL
Sbjct: 531 NIFL 534



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 135/506 (26%), Positives = 235/506 (46%), Gaps = 7/506 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  LI   A    F  +  VL  M+       E  +  +   + +     EA++LF  M
Sbjct: 283 TFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEM 342

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +   K+TV ++N +   + +EG    A +  + ++ A    ++ +   FN V+    R
Sbjct: 343 VSK-GIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLA---GMMVHCSLFNSVVAWHLR 398

Query: 205 -LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G +D  ++L REM  R  +P+       +  LCK  + +EA  +  ++   G      
Sbjct: 399 GTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVA 458

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T N LI+GLC+   +  A K++  M   G   + +TYN +I G C    +D+A+ L D M
Sbjct: 459 TSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDM 518

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +     P+  T+   ++    LG+  +   +L  M+      +   Y T+I G  K    
Sbjct: 519 IKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDM 578

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A +   ++M+ G +PN V+Y+ALI G  R G   +A  IL  M  NG      TY+SL
Sbjct: 579 HKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSL 638

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           M     +G   +   ++      +     + Y+++I G C+ GK+ EA M + +M SRG 
Sbjct: 639 MYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGI 698

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P+ + Y++++     +G+ EEA KLF+EM+ L     PD  +YN L++  C+  ++   
Sbjct: 699 PPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSL--GIVPDSVSYNTLISGFCEVDSLDKM 756

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
           ++    M  +    D  + N F+  +
Sbjct: 757 VESPAEMSSQVLKQDGCSYNAFVDGI 782



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/321 (28%), Positives = 149/321 (46%), Gaps = 27/321 (8%)

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME-KGCKPNTV 403
           L RA D     + +  R    +    S L+  L   G+ + A K++ +M + K   P+  
Sbjct: 156 LSRAADA---FLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVH 212

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y+A+I  LCR G+ D A  +L E+  +G      TY+ LM    +SG+  +A  +   M
Sbjct: 213 TYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 272

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            +     + V + +LI GL    +  E   V  +M   G  P+ V Y+ MI   C  G  
Sbjct: 273 VEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHC 332

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            EALKLF+EM+    K    V TYN++  ALCK+  + H+  +L+ M+  G    +V C+
Sbjct: 333 SEALKLFDEMVSKGIKQT--VVTYNLIAKALCKEGEMEHAEKILDEMLLAGM---MVHCS 387

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           +F + +   L     GT  L +L +RL +             ML +FL P  +     +Q
Sbjct: 388 LFNSVVAWHLR----GTGRL-DLVLRLIRE------------MLARFLKPNDALMTACIQ 430

Query: 644 ELCRPKRIQAAINKCWSNLYG 664
           ELC+  + + A  + W  + G
Sbjct: 431 ELCKSGKHEEA-AEIWFQVLG 450


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 233/454 (51%), Gaps = 6/454 (1%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+ ++LF  +V E   +     +   +   ++ G   RA+E    +   K   + P    
Sbjct: 164 EDTLQLFSEIV-ESGLRPDQFMYGKAIQAAVKLGDLKRAIEL---MTCMKRGGVSPGVFV 219

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +N+VI  +C+   + +A +LF EM  R   P+  TY TL+DG CK  +L+EA  + + M+
Sbjct: 220 YNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMK 279

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           V+   PT +TFN L+NGLC+   +  A ++++ M + G +P+  TY TL  G    GN+D
Sbjct: 280 VENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVD 339

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            +++L +  V       + T   ++N L K G       VL    E         ++T++
Sbjct: 340 ASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIV 399

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +G  + G    A    ++M   G +PN V Y++L+   C +   +EAE+ + +M+  G  
Sbjct: 400 NGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVL 459

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N  TY++L+ G+  S    +  +I ++M K     N + Y  LI+ LC+D  + EA ++
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI 519

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
              M+ RG  P+   Y+ +I G C AG +++A + F+EM+  E    P + TYNIL+N L
Sbjct: 520 LGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVARE--IVPTLVTYNILINGL 577

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           CK+  +  + +L + +  +G   D++T N  ++ 
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVITYNSLISG 611



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 173/642 (26%), Positives = 304/642 (47%), Gaps = 40/642 (6%)

Query: 29  TIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYS 88
            +PS  S   F + S VS+ +  +T         Q FS EI  S  +   +  G +    
Sbjct: 143 VLPSVASLNLF-LESLVSTKRYEDTL--------QLFS-EIVESGLRPDQFMYGKA---- 188

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVD 146
            IQ     GD K    ++  M+R    V    F++  +     K   +++A +LF  M+D
Sbjct: 189 -IQAAVKLGDLKRAIELMTCMKRGG--VSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLD 245

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
                  + ++N++++   + G    A      +   K  N+ P  +TFN ++  +CR  
Sbjct: 246 RRVAPNRI-TYNTLIDGYCKVGQLEEAFNIRERM---KVENVEPTIITFNSLLNGLCRAQ 301

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
           +++ A ++  EM V    PD +TY TL DG  K   +D ++ L +E    G      T +
Sbjct: 302 MMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCS 361

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +L+N LCK G + +A +++      G  P  V +NT+++G C  G+++KA + +++M A 
Sbjct: 362 ILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAV 421

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
              PN VTY +++    ++    +  + +  M E+    N   Y+TLI G  +    +  
Sbjct: 422 GLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRC 481

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
            ++ ++M +KG KPN + Y  LI+ LC+     EAE IL +M++ G   NA  Y+ L+ G
Sbjct: 482 FQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDG 541

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
              +GK   A   + +M     V   V Y++LI+GLC+ GK+ EA  + +++  +G   D
Sbjct: 542 SCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFD 601

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           V+ Y+S+I G  +AG+V++AL+L+  M   +   +P + TY+ L+ A C +  +     +
Sbjct: 602 VITYNSLISGYSSAGNVQKALELYETM--KKSGIKPTLNTYHRLI-AGCGKEGLVLVEKI 658

Query: 567 LNSMMDRGCDPDLVTCNIFL------------TALKEKLEAPQDGTDFL--NELAIRLFK 612
              M+     PD V  N  +             +L   +EA     D +  N L +  FK
Sbjct: 659 YQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFK 718

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             R      +V  M  + L P+T T++ ++   C+ K    A
Sbjct: 719 EGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGA 760



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 188/411 (45%), Gaps = 37/411 (9%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           FN+++N   Q G  ++A   Y  I   + + + PN +T+N ++K  C +  ++ A +  +
Sbjct: 395 FNTIVNGYCQVGDINKA---YTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIK 451

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M  +   P++ TY TL+DG  +    D    +L+EM+  G  P  +++  LIN LCK+ 
Sbjct: 452 KMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDA 511

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            +  A  ++ +M  +G +PN   YN LI G C+ G L  A    D MVA + +P  VTY 
Sbjct: 512 NILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYN 571

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +INGL K G+ ++   +   +  +    +   Y++LISG    G  + A++L++ M + 
Sbjct: 572 ILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKS 631

Query: 397 GCKP----------------------------------NTVVYSALIDGLCRVGKPDEAE 422
           G KP                                  + V+Y+ALI      G   +A 
Sbjct: 632 GIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKAC 691

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +   M   G   +  TY+ L+ G F+ G+ HK   +  DM     +     Y +LI G 
Sbjct: 692 SLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGH 751

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           C+      A + + +M   G  P V    ++I GL   G   +A  + +EM
Sbjct: 752 CKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADVICSEM 802



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 181/396 (45%), Gaps = 8/396 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL++ +    + +  E  + +M  +  +   +++  +   YG++ L +   ++   M
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++   K  V S+  ++N + ++     A      +V   H  ++PN   +N++I   C 
Sbjct: 489 -EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMV---HRGVVPNAQIYNMLIDGSCI 544

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G + +A + F EM  R   P + TY  L++GLCK+ ++ EA  L  E+   G     +T
Sbjct: 545 AGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVIT 604

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+G    G + +A +L + M   G  P   TY+ LI G C K  L     +   M+
Sbjct: 605 YNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEML 663

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P+ V Y  +I+  V+ G       +  +ME +    ++  Y+ LI G FKEG+  
Sbjct: 664 QMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMH 723

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
               L   M  +G  P T  Y  LI G C++   D A     EM  NG   +     +L+
Sbjct: 724 KVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLI 783

Query: 445 KGFFESGKGHKAVEIWKDM---AKNNCVYNEVCYSV 477
            G  E G+ H A  I  +M    K++C  +E   +V
Sbjct: 784 TGLREEGRSHDADVICSEMNMKGKDDCRADEDASAV 819



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/431 (22%), Positives = 186/431 (43%), Gaps = 59/431 (13%)

Query: 260 PTPVTFNVLINGLCKNGEL-GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
           P    F+ ++  +C   ++   +A+L   M   G LP+  + N  +  L      +  + 
Sbjct: 109 PMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQ 168

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           L   +V S   P++  YG  I   VKLG       ++  M+        ++Y+ +I GL 
Sbjct: 169 LFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLC 228

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK-----------------P--- 418
           KE + +DA KL+ +M+++   PN + Y+ LIDG C+VG+                 P   
Sbjct: 229 KEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTII 288

Query: 419 ---------------DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
                          +EA+ +L EM   G   + FTY++L  G  + G    ++ + ++ 
Sbjct: 289 TFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEA 348

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            +      +   S+L++ LC++G + +A  V  + L  G  P  V ++++++G C  G +
Sbjct: 349 VRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDI 408

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            +A     +M  +  +  P+  TYN L+   C+  N+  +   +  M+++G  P++ T N
Sbjct: 409 NKAYTTIEKMEAVGLR--PNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYN 466

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
             +                       LF R      F+I+E M +K L P   ++  ++ 
Sbjct: 467 TLIDGYGRSC----------------LFDR-----CFQILEEMEKKGLKPNVISYGCLIN 505

Query: 644 ELCRPKRIQAA 654
            LC+   I  A
Sbjct: 506 CLCKDANILEA 516


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 226/448 (50%), Gaps = 8/448 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           ++EA+ LFH++V +  C       + ++  + + G     L+    +++ +    L    
Sbjct: 15  LDEALELFHSLVSD-GCGLPA---DLLVRELSKAGRAEECLKVVKLMLDRQQ---LRERH 67

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
             N+ I ++C+  ++D A   F+E+       +  +Y  L++  CK  R+DEA+ L  EM
Sbjct: 68  LVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEM 127

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  GC P+  T+N LI GLC+   LG A +  + +   G   + +TYN L+ G C    +
Sbjct: 128 KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRV 187

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +AV LL+ +VA   +     Y  II+ L K G+  +       ME+      E  ++ L
Sbjct: 188 PEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVL 247

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I GL K  +   A +++   +E G  P+ V+ S L+DG C+ G  DEA  I   M N GC
Sbjct: 248 IDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGC 307

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             N  + + L+ G  ++ +  +A E+++++ K     + V YS  + GLC   ++ +AR 
Sbjct: 308 TPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQ 367

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           V   ++ +G  PDVV Y+++I GLC+ G ++EA K+F E+        P+ FT N+L+N 
Sbjct: 368 VLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVF-EVDMRAAGCAPNNFTCNVLVNG 426

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVT 581
                 +  + +L    ++RG  PD  T
Sbjct: 427 FGLAGRLDEARELFQRFVERGVQPDCRT 454



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 215/425 (50%), Gaps = 13/425 (3%)

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           G    ALE ++ +V+          L  +L+++ + + G  +  +++ + M  R    + 
Sbjct: 13  GKLDEALELFHSLVSDGC------GLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRER 66

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
           +     +D LCK + +D+A     E++        V++N+LIN  CK   +  A +L   
Sbjct: 67  HLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGE 126

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   GC P+  TYNTLI GLC    L +A    +R+++S    + +TY  +++G  K  R
Sbjct: 127 MKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADR 186

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +   +L  +  R   V    Y+ +I  LFK+GK  +A   + +M + G +P  V ++ 
Sbjct: 187 VPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTV 246

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LIDGLC+  +   A+EI F  + +G + +    S LM GF + G   +A  I++ M    
Sbjct: 247 LIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRG 306

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  N+V  ++LI+GLC+  +L +AR V+ +++ R  KPDVV YS+ + GLC A  V++A 
Sbjct: 307 CTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQA- 365

Query: 528 KLFNEMLCL--EPKSQPDVFTYNILLNALCKQSNISHSIDLLN-SMMDRGCDPDLVTCNI 584
               ++LC+  +    PDV  Y  L++ LC    +  +  +    M   GC P+  TCN+
Sbjct: 366 ---RQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNV 422

Query: 585 FLTAL 589
            +   
Sbjct: 423 LVNGF 427



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 214/435 (49%), Gaps = 7/435 (1%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            + +   KA   EE +++   M+D     R     N  ++ + +  +  +A  ++  +  
Sbjct: 36  LLVRELSKAGRAEECLKVVKLMLDRQQL-RERHLVNITIDSLCKSDMIDKAESWFQEL-- 92

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            K    L NT+++N++I   C+   +D AIQLF EM    C P   TY TL+ GLC+  R
Sbjct: 93  -KDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVER 151

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L EA    + +   G   + +T+N+L++G CK   +  A +L++ +  +G +     YN 
Sbjct: 152 LGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNC 211

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I  L  KG + +A    +RM      P EVT+  +I+GL K  R      +  S  E  
Sbjct: 212 IIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESG 271

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              +  I S L+ G  K G  ++A ++++ M  +GC PN V  + LI+GLC+  +  +A 
Sbjct: 272 GSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAR 331

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           E+  E++      +  TYS+ M G   + +  +A ++   +       + V Y+ LI GL
Sbjct: 332 EVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGL 391

Query: 483 CEDGKLREARMVW-TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           C  G+L EAR V+   M + GC P+    + +++G   AG ++EA +LF     +E   Q
Sbjct: 392 CSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRF--VERGVQ 449

Query: 542 PDVFTYNILLNALCK 556
           PD  T++ + N   K
Sbjct: 450 PDCRTFSAMANNTAK 464



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 194/397 (48%), Gaps = 40/397 (10%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +  A+ K   ++EAI+LF  M     C  +  ++N+++  + +      A +FY  
Sbjct: 103 SYNILINAFCKTKRIDEAIQLFGEM-KAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYER 161

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++++       + +T+N+++   C+   V  A++L  E+  R        Y  ++D L K
Sbjct: 162 LLSSGAG---ASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFK 218

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           + ++ EA L  + M+ DG  P  VTF VLI+GLCK   + RA ++  +    G  P+ V 
Sbjct: 219 KGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVI 278

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
            + L+ G C  G +D+A  + + M    C PN+V+   +INGL K  R      V   + 
Sbjct: 279 CSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVV 338

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +R+   +   YST + GL +  + + A ++   +++KG  P+ V+Y+ALI GLC +G+ D
Sbjct: 339 KRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLD 398

Query: 420 EAEEIL-FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           EA ++   +M   GCA N FT + L+ GF                               
Sbjct: 399 EARKVFEVDMRAAGCAPNNFTCNVLVNGF------------------------------- 427

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
             GL   G+L EAR ++ + + RG +PD   +S+M +
Sbjct: 428 --GLA--GRLDEARELFQRFVERGVQPDCRTFSAMAN 460



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 182/418 (43%), Gaps = 61/418 (14%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           LC   +LDEA+ L   +  DGC    +  ++L+  L K G      K+V  M  +  L  
Sbjct: 9   LCHVGKLDEALELFHSLVSDGC---GLPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
               N  I  LC    +DKA S    +   + + N V+Y                     
Sbjct: 66  RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSY--------------------- 104

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
                         + LI+   K  + ++A++L+ +M   GC P+T  Y+ LI GLCRV 
Sbjct: 105 --------------NILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVE 150

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           +  EA++    ++++G  A+  TY+ L+ GF ++ +  +AVE+  ++     V     Y+
Sbjct: 151 RLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYN 210

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            +I  L + GK+ EA + + +M   G +P  V ++ +I GLC A  V  A ++F   L  
Sbjct: 211 CIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYL-- 268

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
           E    P V   + L++  CK   +  +  +   M +RGC P+ V+CNI +          
Sbjct: 269 ESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILING-------- 320

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                        L K +R S   ++ E ++++   P   T+   +  LCR  R+  A
Sbjct: 321 -------------LCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQA 365


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 237/498 (47%), Gaps = 10/498 (2%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+ +LI+      D +  +  L  M R        +F  +   Y +   ++ A  LF  
Sbjct: 130 ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDK 189

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M      +  V S+ +++    + G    ALE +  +         P+  T   ++K +C
Sbjct: 190 MPLRGFSQDAV-SYAALIEGFCETGRVDEALELFRELEQ-------PDMYTHAALVKGLC 241

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
                +  + + ++M      P    Y  L+D  C+E + +EA  +L+EM  +G  P  V
Sbjct: 242 DARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV 301

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T   ++N  C+ G +  A ++ ++M LKGC PN  TYN ++ G C  G + KA++LLD+M
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                 P+ VTY  +I G    G      R+L  ME      ++Y Y+ LI  L K GK 
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           ++A  L+  +  +G +PN+V ++ +I+GLC+ GK D A   L +M++ GCA + +TYS  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPF 481

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           ++   ++    + +    +M + +   + V Y+++I  L ++     A  +W QM+S GC
Sbjct: 482 IENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGC 541

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PDVV Y++ +   CN G + EA  +  EM   +     D   YN L++         H+
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEAENVVMEM--KKGGIIVDAMAYNTLIDGHTSIGKTDHA 599

Query: 564 IDLLNSMMDRGCDPDLVT 581
           + +L  M      P+  T
Sbjct: 600 VTILKHMTGVASMPNHFT 617



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 240/518 (46%), Gaps = 27/518 (5%)

Query: 98  DFKSLEMVLYRMRREKRV---VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTV 154
           D +  E  LY +++ K +      +++  +   + +    EEA ++ + M D       V
Sbjct: 242 DARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV 301

Query: 155 KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
            +  +V+N   +EG    A+  +  +   K     PN  T+N +++  C +G V  A+ L
Sbjct: 302 -TCTAVVNAYCREGRMSGAVRVFESM---KLKGCEPNVWTYNAMVQGFCNVGKVYKAMAL 357

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
             +M     EPD+ TY  L+ G C +  ++ A  LL  M+ +G      T+NVLI+ LCK
Sbjct: 358 LDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCK 417

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G++  A  L D +  +G  PN VT+NT+I+GLC  G  D A + L++MV++ C P+  T
Sbjct: 418 TGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYT 477

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y   I  L K   + +G   +  M ++    +   Y+ +I  LFKE     A ++W QM+
Sbjct: 478 YSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMV 537

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
             GC P+ V Y+  +   C  G+  EAE ++ EM   G   +A  Y++L+ G    GK  
Sbjct: 538 SLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTD 597

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGL-----CEDGKLREARMVWT-----------QM 498
            AV I K M     + N   + +L+  L      ED  L+    VW            ++
Sbjct: 598 HAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTS-VWKTIELADVFELFEL 656

Query: 499 LSRGCKPDVV-AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           + +   P    AY +++ G      ++E   L + M   +     D++T   L+N  CK 
Sbjct: 657 MKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTS--LVNCFCKL 714

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
                +  LL SM+  G  P+L++    L+    + +A
Sbjct: 715 RMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQA 752



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 126/458 (27%), Positives = 205/458 (44%), Gaps = 35/458 (7%)

Query: 155 KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
           ++F S+L    +  L    L  + H+ +  H    P   T+N +I+ +CR   + +A + 
Sbjct: 94  RTFRSLLTHFSRYALTPLMLRLFAHMYH--HGPPAPTGATYNALIRALCRRADLRHAQRY 151

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
              M      PD +T+ +L+ G C+  +LD A  L D+M + G     V++  LI G C+
Sbjct: 152 LSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCE 211

Query: 275 NGELGRAAKLV-----DNMFLKGCL--------------------------PNEVTYNTL 303
            G +  A +L       +M+    L                          P    Y  L
Sbjct: 212 TGRVDEALELFRELEQPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAAL 271

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +   C +   ++A  +L+ M  +  +P  VT   ++N   + GR     RV  SM+ +  
Sbjct: 272 VDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGC 331

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N + Y+ ++ G    GK   AM L  QM E G +P+ V Y+ LI G C  G  + A  
Sbjct: 332 EPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFR 391

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +L  M  NG AA+ +TY+ L+    ++GK  +A  ++  +       N V ++ +I+GLC
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLC 451

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GK   A     +M+S GC PD   YS  I  LC      E L   +EM  L+   +P 
Sbjct: 452 KGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEM--LQKDVKPS 509

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
              Y I+++ L K+ N   +  +   M+  GC PD+VT
Sbjct: 510 TVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVT 547



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 198/418 (47%), Gaps = 23/418 (5%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           PT  T+N LI  LC+  +L  A + +  M   G  P+  T+N+LI G C    LD A  L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDL 186

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            D+M       + V+Y  +I G  + GR  +   +   +E+       Y ++ L+ GL  
Sbjct: 187 FDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDM----YTHAALVKGLCD 242

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             + E+ + + ++M E G +P T  Y+AL+D  CR  K +EAE++L EM +NG    A T
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
            ++++  +   G+   AV +++ M    C  N   Y+ ++ G C  GK+ +A  +  QM 
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQS 558
             G +PDVV Y+ +I G C  G +E A +L   M   E      D +TYN+L++ALCK  
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLM---EGNGLAADQYTYNVLIDALCKTG 419

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTAL------------KEKLEAPQDGTD--FLN 604
            +  +  L + +  RG  P+ VT N  +  L             EK+ +     D    +
Sbjct: 420 KVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYS 479

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
                L K + +  G   ++ MLQK + P T  +  V+  L + +    A  + W  +
Sbjct: 480 PFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLA-TRIWGQM 536



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 112/493 (22%), Positives = 195/493 (39%), Gaps = 73/493 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +++Q + N G       +L +MR    E  VV   ++  + +       +E A RL 
Sbjct: 337 TYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVV---TYNLLIRGQCIDGHIESAFRLL 393

Query: 142 HTM------VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
             M       D++       ++N +++ + + G    A   ++ +   ++  I PN++TF
Sbjct: 394 RLMEGNGLAADQY-------TYNVLIDALCKTGKVDEACSLFDGL---EYRGIRPNSVTF 443

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-Q 254
           N VI  +C+ G  D A     +M    C PD YTY   ++ LCK     E +  +DEM Q
Sbjct: 444 NTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQ 503

Query: 255 VD----------------------------------GCFPTPVTFNVLINGLCKNGELGR 280
            D                                  GC P  VT+   +   C  G L  
Sbjct: 504 KDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHE 563

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI-- 338
           A  +V  M   G + + + YNTLI G    G  D AV++L  M     MPN  T+  +  
Sbjct: 564 AENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLR 623

Query: 339 --------------INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                            + K     D   +   M++     +   Y  ++ G  +E + +
Sbjct: 624 HLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLD 683

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +   L   M E     N  +Y++L++  C++    +A  +L  MI +G   N  +Y  L+
Sbjct: 684 EVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLL 743

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            GF   G+  +A EI++ +       +E+ + ++I GL   G       + + +    CK
Sbjct: 744 SGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCK 803

Query: 505 PDVVAYSSMIHGL 517
           P    Y+ +   L
Sbjct: 804 PSDETYAMLTEEL 816


>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
          Length = 590

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 216/415 (52%), Gaps = 10/415 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLF-HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           S++ IF  Y  + + ++AI++F H  V  F  K  + +   +LN + +  L +   + Y 
Sbjct: 131 SWLVIF--YANSRMTQDAIQVFEHMRVHGF--KPHLHACTVLLNSLAKARLTNMVWKVYK 186

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +V    + ++PN   FN++I   C+ G V+ A QL  EM  R   PD++TY TL+   C
Sbjct: 187 KMVR---VGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 243

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K+    EA+ + D M+  G  P  VT+N LI G C+ G +  A +L     + G  PN V
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHV 301

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY TLI G C   +L++A+ L + M      P  VTY +I+  L + G+  D  R+L  M
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            ERK   +    +TLI+   K G    AMK+ K+M+E G KP+   + ALI G C++ + 
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D A+E LFEM++ G + +  TYS L+  +++       + +  ++++     +   Y  L
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           I  LC+  K+  A  ++T M  +G K D V Y+S+ +    AG    A  + +EM
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 194/381 (50%), Gaps = 8/381 (2%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  +  A  K+  VE+A +L + M   F     + ++N+++++  ++G+++ AL   + +
Sbjct: 200 FNVLIHACCKSGDVEKAEQLLNEMESRF-IFPDLFTYNTLISLYCKKGMHYEALGIQDRM 258

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +   + P+ +T+N +I   CR G +  A++LFRE  +    P+  TY TL+DG C+ 
Sbjct: 259 ---ERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHVTYTTLIDGYCRV 313

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           N L+EA+ L + M+V+G  P  VT+N ++  LC+ G++  A +L++ M  +   P+ VT 
Sbjct: 314 NDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTC 373

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTLI+  C  G++  A+ +  +M+ +   P++ T+  +I+G  KL         L  M +
Sbjct: 374 NTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLD 433

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
             F  +   YS L+   + +   E  ++L  ++  KG   +  VY ALI  LC++ K + 
Sbjct: 434 AGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIES 493

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           AE I   M   G   ++  Y+SL   +F++GK   A ++  +M K   +     Y     
Sbjct: 494 AERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSA 553

Query: 481 GLCEDGKLREARMVWTQMLSR 501
               DG +    + W  ++ R
Sbjct: 554 SYAGDGSI--LGLFWDHVIER 572



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 4/335 (1%)

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +A+ + + M+V G  P      VL+N L K        K+   M   G +PN   +N LI
Sbjct: 145 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLI 204

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           H  C  G+++KA  LL+ M +    P+  TY T+I+   K G   +   +   ME     
Sbjct: 205 HACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVS 264

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y++LI G  +EG+  +A++L++++   G  PN V Y+ LIDG CRV   +EA  +
Sbjct: 265 PDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRL 322

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              M   G      TY+S+++   E GK   A  +  +M++     + V  + LI+  C+
Sbjct: 323 REVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCK 382

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G +  A  V  +ML  G KPD   + ++IHG C    V+ A +   EM  L+    P  
Sbjct: 383 IGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEM--LDAGFSPSY 440

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            TY+ L+++   Q N    I L + +  +G   D+
Sbjct: 441 STYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDI 475



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 192/440 (43%), Gaps = 42/440 (9%)

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING----------------LCKN 275
           T++  L K  +   A  LL+ + V     +P   N ++                     N
Sbjct: 80  TMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYAN 139

Query: 276 GELGR-AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
             + + A ++ ++M + G  P+      L++ L      +    +  +MV    +PN   
Sbjct: 140 SRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHI 199

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           +  +I+   K G      ++L  ME R    + + Y+TLIS   K+G   +A+ +  +M 
Sbjct: 200 FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRME 259

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
             G  P+ V Y++LI G CR G+  EA  +  E+  NG   N  TY++L+ G+       
Sbjct: 260 RGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLE 317

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A+ + + M         V Y+ ++  LCE+GK+++A  +  +M  R  +PD V  +++I
Sbjct: 318 EALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +  C  G +  A+K+  +ML  E   +PD FT+  L++  CK   +  + + L  M+D G
Sbjct: 378 NAYCKIGDMGSAMKVKKKML--EAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAG 435

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             P   T +  + +  +     QD      E  IRL       G F              
Sbjct: 436 FSPSYSTYSWLVDSYYD-----QDN----KEAVIRLPDELSRKGLF------------VD 474

Query: 635 TSTWERVVQELCRPKRIQAA 654
            S +  +++ LC+  +I++A
Sbjct: 475 ISVYRALIRRLCKIDKIESA 494


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 160/632 (25%), Positives = 281/632 (44%), Gaps = 87/632 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            +++++  Y   G  +    +L+ ++ +       ++  + K Y K   +EEA ++   +
Sbjct: 201 AYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEI 260

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +         ++ +++N   Q G    A    + +++A    +  N   +N +I   C+
Sbjct: 261 KENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDA---GVQVNMFVYNTMINGYCK 317

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           LG +    +L +    R    D Y+Y TL+DG C++  + +A    D M  +G   T +T
Sbjct: 318 LGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLT 377

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE--------------------------- 297
           +N L+NG C  G +  A KL   M  +G +PNE                           
Sbjct: 378 YNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETL 437

Query: 298 --------VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
                   VT NT+I+GLC    + +A  L  RM    C  + +TY T+I+G  KLG   
Sbjct: 438 ARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLG 497

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
              ++ + ME   F  +  ++++ I+GLF   ++     +  +M  KG  PNTV Y ALI
Sbjct: 498 RATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALI 557

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA------------- 456
            G C+ G   +A  + FEM+  G   N F  S L+  F+  GK  +A             
Sbjct: 558 AGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMI 617

Query: 457 -------------VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
                          I + +A  N    ++ ++++I GLC+ G++ +AR ++  +  +G 
Sbjct: 618 QDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGF 677

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PD   YSS+IHG   +GS++ A  L +EML    +  P++ TYN L+  LCK  N+S +
Sbjct: 678 IPDNFTYSSLIHGCSASGSIDLAFGLRDEML--SARLTPNIVTYNSLIYGLCKSCNVSRA 735

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
           + L N +  +G  P+ +T N  +           DG            K   T+  FK+ 
Sbjct: 736 VSLFNKLQSKGISPNAITYNTLI-----------DGH----------CKDGNTTEAFKLK 774

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           + M+++ + P   T+  ++  LC    ++ AI
Sbjct: 775 QKMIKEGIQPTVFTYTILIHGLCTQGYMEEAI 806



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 146/552 (26%), Positives = 259/552 (46%), Gaps = 37/552 (6%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
           +G  +      DE+ ++  ++  +      + ++I  Y   G    +E +L         
Sbjct: 283 RGRMEDANRVRDEMIDAGVQVNMF-----VYNTMINGYCKLGRMGEVEKLLQANEYRGVN 337

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           + E S+  +   Y +   + +A      MV       T+ ++N++LN     G    AL+
Sbjct: 338 LDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTL-TYNTLLNGFCSRGAIDDALK 396

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
            +  ++      ++PN ++ + ++    + G  + A+ L++E   R    ++ T  T+++
Sbjct: 397 LWFLMLK---RGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVIN 453

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           GLCK  R+ EA  L   M+   C    +T+  LI+G CK G+LGRA ++   M   G +P
Sbjct: 454 GLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVP 513

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           +   +N+ I GL +     K   +   M A    PN VTYG +I G  K G   D   + 
Sbjct: 514 SVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILY 573

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDA----MKLWKQMMEKGCKPNT--------- 402
             M E+    N +I S L+S  ++EGK ++A     KL    M + C  +T         
Sbjct: 574 FEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHI 633

Query: 403 -------------VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
                        ++++ +I GLC++G+  +A  +  ++   G   + FTYSSL+ G   
Sbjct: 634 IESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSA 693

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           SG    A  +  +M       N V Y+ LI+GLC+   +  A  ++ ++ S+G  P+ + 
Sbjct: 694 SGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAIT 753

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+++I G C  G+  EA KL  +M+  +   QP VFTY IL++ LC Q  +  +I LL+ 
Sbjct: 754 YNTLIDGHCKDGNTTEAFKLKQKMI--KEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQ 811

Query: 570 MMDRGCDPDLVT 581
           M++   DP+ +T
Sbjct: 812 MIENNVDPNFIT 823



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 159/649 (24%), Positives = 282/649 (43%), Gaps = 119/649 (18%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  + +A+  A  +++A+ +F  M  +   +RT++S N +LN ++Q G    A+  +  
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEM-GKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQ 154

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  A     LP+  T  ++ K  CR G V +A    +EM     + ++  Y  +MDG C+
Sbjct: 155 MRCA---GTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCR 211

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL-KGCLPNEV 298
             + + A  LL  +QV G  P  VT+ +L+ G CK G +  A K+V  +   +  + +EV
Sbjct: 212 IGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEV 271

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y  LI+G C +G ++ A  + D M+ +    N   Y T+ING  KLGR  +  ++L + 
Sbjct: 272 AYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQAN 331

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E R  +++EY Y+TL+ G  ++G    A +    M+  G    T+ Y+ L++G C  G  
Sbjct: 332 EYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAI 391

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD-----MAKN----NCV 469
           D+A ++ F M+  G   N  + S+L+ GFF++GK  +A+ +WK+     +A+N    N V
Sbjct: 392 DDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTV 451

Query: 470 YNEVC--------------------------YSVLIHGLCEDGKLREARMVW-------- 495
            N +C                          Y  LI G C+ G L  A  +         
Sbjct: 452 INGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGF 511

Query: 496 ---------------------------TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
                                       +M ++G  P+ V Y ++I G C  G++ +A  
Sbjct: 512 VPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACI 571

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL--------- 579
           L+ EM+  E   +P++F  ++L++   ++  +  +  +L  + D     D          
Sbjct: 572 LYFEMV--EKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGK 629

Query: 580 -----------------VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR------- 615
                            +  NI +  L  KL    D  +   +L ++ F           
Sbjct: 630 VAHIIESLAGGNHQSAKIMWNIVILGLC-KLGRVADARNLFEDLKVKGFIPDNFTYSSLI 688

Query: 616 ----TSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                SG     F + + ML   L+P   T+  ++  LC+   +  A++
Sbjct: 689 HGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVS 737



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 150/584 (25%), Positives = 273/584 (46%), Gaps = 19/584 (3%)

Query: 69  IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
           +F+   K GS +   S    L+     +GD  +   V  +MR    +  + +   + KAY
Sbjct: 116 VFDEMGKAGSRRTLRSC-NRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAY 174

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            +   V  A      M +E      + ++++V++   + G    A +   H +  K ++ 
Sbjct: 175 CRDGRVAHAADFLKEM-EEMGLDVNLVAYHAVMDGYCRIGQTEVARKLL-HSLQVKGLS- 231

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV-RNCEPDIYTYCTLMDGLCKENRLDEAV 247
            PN +T+ L++K  C+ G ++ A ++ +E+        D   Y  L++G C+  R+++A 
Sbjct: 232 -PNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDAN 290

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            + DEM   G       +N +ING CK G +G   KL+     +G   +E +YNTL+ G 
Sbjct: 291 RVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGY 350

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C KG + KA    D MV +      +TY T++NG    G   D  ++   M +R    NE
Sbjct: 351 CRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNE 410

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
              STL+ G FK GK E A+ LWK+ + +G   N V  + +I+GLC+  +  EAEE+   
Sbjct: 411 ISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHR 470

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC---E 484
           M    C  ++ TY +L+ G+ + G   +A +I  +M     V +   ++  I GL    +
Sbjct: 471 MKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQ 530

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            GK+ + R+   +M ++G  P+ V Y ++I G C  G++ +A  L+ EM  +E   +P++
Sbjct: 531 SGKVNDIRV---EMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEM--VEKGLKPNL 585

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD--- 601
           F  ++L++   ++  +  +  +L  + D     D     + +  +   +E+   G     
Sbjct: 586 FICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSA 645

Query: 602 --FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
               N + + L K  R +    + E +  K   P   T+  ++ 
Sbjct: 646 KIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIH 689



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 211/475 (44%), Gaps = 30/475 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  + + G       + + M +   V  E S   +   + KA   E+A+ L+   
Sbjct: 377 TYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKET 436

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +      R V + N+V+N + +      A E ++ +   K  +   ++LT+  +I   C+
Sbjct: 437 LAR-GLARNVVTINTVINGLCKNRRMTEAEELFHRM---KEWSCPCDSLTYRTLIDGYCK 492

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           LG +  A Q+  EM      P +  + + + GL    +  +   +  EM   G  P  VT
Sbjct: 493 LGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVT 552

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI G CK G L  A  L   M  KG  PN    + L+     +G +D+A  +L ++ 
Sbjct: 553 YGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLA 612

Query: 325 ASKCMPN--------------------------EVTYGTIINGLVKLGRAVDGARVLMSM 358
            +  + +                          ++ +  +I GL KLGR  D   +   +
Sbjct: 613 DTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDL 672

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           + + F  + + YS+LI G    G  + A  L  +M+     PN V Y++LI GLC+    
Sbjct: 673 KVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNV 732

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             A  +  ++ + G + NA TY++L+ G  + G   +A ++ + M K         Y++L
Sbjct: 733 SRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTIL 792

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           IHGLC  G + EA  +  QM+     P+ + Y ++I G    G+++   KL+NEM
Sbjct: 793 IHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 113/463 (24%), Positives = 196/463 (42%), Gaps = 43/463 (9%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD---------------EAVLLLDEM 253
           D A+ LFR  P   C P +  +  L+  L    R                    L  D +
Sbjct: 28  DAALHLFRLAP---CRPSLLAHAQLLHILAHARRFPAARALLASLLSAHSVAPTLFPDLV 84

Query: 254 QVDGCFP-TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +V   F  +  +F++L+      G+L  A  + D M   G      + N L++ L   G+
Sbjct: 85  EVYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGD 144

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +  AV++  +M  +  +P++ T   +     + GR    A  L  MEE    VN   Y  
Sbjct: 145 IGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHA 204

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI-NN 431
           ++ G  + G+ E A KL   +  KG  PN V Y+ L+ G C+ G+ +EAE+++ E+  N 
Sbjct: 205 VMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENE 264

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
               +   Y +L+ G+ + G+   A  +  +M       N   Y+ +I+G C+ G++ E 
Sbjct: 265 KIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEV 324

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +      RG   D  +Y++++ G C  G + +A +  + M  +         TYN LL
Sbjct: 325 EKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMM--VRNGFTGTTLTYNTLL 382

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           N  C +  I  ++ L   M+ RG  P+ ++C+  L           DG           F
Sbjct: 383 NGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLL-----------DG----------FF 421

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           K  +T     + +  L + L+    T   V+  LC+ +R+  A
Sbjct: 422 KAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEA 464



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 156/342 (45%), Gaps = 61/342 (17%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PNT+T+  +I   C+ G + +A  L+ EM  +  +P+++    L+    +E ++DEA L+
Sbjct: 548 PNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLV 607

Query: 250 LDEMQ----VDGCFPTP----------------------VTFNVLINGLCKNGELGRAAK 283
           L ++     +  C  +                       + +N++I GLCK G +  A  
Sbjct: 608 LQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARN 667

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           L +++ +KG +P+  TY++LIHG    G++D A  L D M++++  PN VTY        
Sbjct: 668 LFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTY-------- 719

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
                                      ++LI GL K      A+ L+ ++  KG  PN +
Sbjct: 720 ---------------------------NSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAI 752

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y+ LIDG C+ G   EA ++  +MI  G     FTY+ L+ G    G   +A+++   M
Sbjct: 753 TYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQM 812

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
            +NN   N + Y  LI G    G ++    ++ +M   G  P
Sbjct: 813 IENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLP 854



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 91/179 (50%), Gaps = 3/179 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +++S+++     G    A    + +++A+   + PN +T+N +I  +C+   V  A+ LF
Sbjct: 683 TYSSLIHGCSASGSIDLAFGLRDEMLSAR---LTPNIVTYNSLIYGLCKSCNVSRAVSLF 739

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            ++  +   P+  TY TL+DG CK+    EA  L  +M  +G  PT  T+ +LI+GLC  
Sbjct: 740 NKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQ 799

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
           G +  A KL+D M      PN +TY TLI G    GN+     L + M     +P   T
Sbjct: 800 GYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANWT 858



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 10/186 (5%)

Query: 85  TFYSLIQHYANSGDFK---SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ SLI   + SG       L   +   R    +V   S I+      K+  V  A+ LF
Sbjct: 683 TYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIY---GLCKSCNVSRAVSLF 739

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           + +  +      + ++N++++   ++G    A +    ++      I P   T+ ++I  
Sbjct: 740 NKLQSKGISPNAI-TYNTLIDGHCKDGNTTEAFKLKQKMIKE---GIQPTVFTYTILIHG 795

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C  G ++ AI+L  +M   N +P+  TY TL+ G  +   +     L +EM + G  P 
Sbjct: 796 LCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPA 855

Query: 262 PVTFNV 267
             T +V
Sbjct: 856 NWTGHV 861


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 244/490 (49%), Gaps = 8/490 (1%)

Query: 90  IQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVDE 147
           +Q    +GD      +L RM R +      +F +  +     ++    +A+++F  MVD 
Sbjct: 165 VQACVAAGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDR 224

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
                 + ++N++++  ++ G         + ++        PN +T+N+++  +CR G 
Sbjct: 225 GVAPNQI-TYNTMIDGHVKGGDLEAGFRLRDQMLQDGRK---PNVVTYNVLLSGLCRAGR 280

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +D    L  EM   +  PD +TY  L DGL +       + L  E    G      T ++
Sbjct: 281 MDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSI 340

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L+NGLCK+G++ +A ++++ +   G +P    YNTLI+G C   +L  A S+ ++M +  
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+ +TY  +INGL K+    +   ++M ME+     +   ++TLI    + G+ E   
Sbjct: 401 IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF 460

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            +   M +KG K N + + +++   C+ GK  EA  IL +MI+     NA  Y+S++  +
Sbjct: 461 TVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAY 520

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            ESG   +A  + + M  +    +   Y++L+ GLC++ ++ EA  +   + ++G +PDV
Sbjct: 521 IESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDV 580

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V+Y+++I   CN G  + AL+L  EM   + +  P + TY+ LL+AL     +     L 
Sbjct: 581 VSYNTIISACCNKGDTDRALELLQEMHKYDIR--PTLRTYHPLLSALGSAGRVHDMECLY 638

Query: 568 NSMMDRGCDP 577
             M+ +  +P
Sbjct: 639 QHMVHKNVEP 648



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 206/399 (51%), Gaps = 2/399 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  ++N+VI  + R G   +A+++F EM  R   P+  TY T++DG  K   L+    L
Sbjct: 193 PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRL 252

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M  DG  P  VT+NVL++GLC+ G +     L+D M     LP+  TY+ L  GL  
Sbjct: 253 RDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTR 312

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+    +SL    +    +    T   ++NGL K G+     +VL  +          I
Sbjct: 313 TGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAI 372

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  +    + A  +++QM  +  +P+ + Y+ALI+GLC++    EAE+++ EM 
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            +G   +  T+++L+  +  +G+  K   +  DM       N + +  ++   C++GK+ 
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  +   M+ +   P+   Y+S+I     +G  E+A  L  +M          +FTYN+
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMK--SSGVSASIFTYNL 550

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           LL  LCK S I  + +L+ ++ ++G  PD+V+ N  ++A
Sbjct: 551 LLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISA 589



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 219/435 (50%), Gaps = 7/435 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+N V+  + + G    AL+ ++ +V+     + PN +T+N +I    + G ++   +L 
Sbjct: 197 SYNVVIAGLWRSGKGSDALKVFDEMVD---RGVAPNQITYNTMIDGHVKGGDLEAGFRLR 253

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M     +P++ TY  L+ GLC+  R+DE   L+DEM      P   T+++L +GL + 
Sbjct: 254 DQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRT 313

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+      L      KG +    T + L++GLC  G + KA  +L+ +V +  +P    Y
Sbjct: 314 GDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIY 373

Query: 336 GTIINGLVKLGRAVDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
            T+ING  ++ R + GA  +   M+ R    +   Y+ LI+GL K     +A  L  +M 
Sbjct: 374 NTLINGYCQV-RDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           + G  P+   ++ LID   R G+ ++   +L +M + G  +N  ++ S++K F ++GK  
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +AV I  DM   + V N   Y+ +I    E G   +A ++  +M S G    +  Y+ ++
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GLC    ++EA +L   +       +PDV +YN +++A C + +   +++LL  M    
Sbjct: 553 KGLCKNSQIDEAEELIYNLT--NQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYD 610

Query: 575 CDPDLVTCNIFLTAL 589
             P L T +  L+AL
Sbjct: 611 IRPTLRTYHPLLSAL 625



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 163/332 (49%), Gaps = 4/332 (1%)

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P+  + N+L+  L   G           +   G  P+   +N  +      G+LD+A++
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALA 179

Query: 319 LLDRMVASKCM--PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           +L RM  S+    P+  +Y  +I GL + G+  D  +V   M +R    N+  Y+T+I G
Sbjct: 180 MLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDG 239

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K G  E   +L  QM++ G KPN V Y+ L+ GLCR G+ DE   ++ EM +     +
Sbjct: 240 HVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPD 299

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            FTYS L  G   +G     + ++ +  K   +      S+L++GLC+DGK+ +A  V  
Sbjct: 300 GFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLE 359

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            ++  G  P    Y+++I+G C    ++ A  +F +M     +  PD  TYN L+N LCK
Sbjct: 360 MLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIR--PDHITYNALINGLCK 417

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
              I+ + DL+  M   G DP + T N  + A
Sbjct: 418 MEMITEAEDLVMEMEKSGVDPSVETFNTLIDA 449



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 154/326 (47%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            ++    T ++++  +C+ G V  A Q+   +      P    Y TL++G C+   L  A
Sbjct: 330 GVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGA 389

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             + ++M+     P  +T+N LINGLCK   +  A  LV  M   G  P+  T+NTLI  
Sbjct: 390 FSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDA 449

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
               G L+K  ++L  M       N +++G+++    K G+  +   +L  M  +    N
Sbjct: 450 YGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPN 509

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             +Y+++I    + G  E A  L ++M   G   +   Y+ L+ GLC+  + DEAEE+++
Sbjct: 510 AQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIY 569

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            + N G   +  +Y++++      G   +A+E+ ++M K +       Y  L+  L   G
Sbjct: 570 NLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAG 629

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSS 512
           ++ +   ++  M+ +  +P    Y +
Sbjct: 630 RVHDMECLYQHMVHKNVEPSSSIYGT 655



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/290 (22%), Positives = 140/290 (48%), Gaps = 3/290 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T   +N+++N   Q      A   +  +   K  +I P+ +T+N +I  +C++ ++  A 
Sbjct: 369 TTAIYNTLINGYCQVRDLQGAFSIFEQM---KSRHIRPDHITYNALINGLCKMEMITEAE 425

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L  EM     +P + T+ TL+D   +  +L++   +L +MQ  G     ++F  ++   
Sbjct: 426 DLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAF 485

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CKNG++  A  ++D+M  K  +PN   YN++I      G  ++A  L+++M +S    + 
Sbjct: 486 CKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASI 545

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            TY  ++ GL K  +  +   ++ ++  +    +   Y+T+IS    +G  + A++L ++
Sbjct: 546 FTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQE 605

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           M +   +P    Y  L+  L   G+  + E +   M++     ++  Y +
Sbjct: 606 MHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYGT 655



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 21/177 (11%)

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           ++L+  L   G+  + R  +  +++ G +PD  A++  +     AG ++EAL +   M  
Sbjct: 127 NLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGR 186

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
            E    PD F+YN+++  L +    S ++ + + M+DRG  P+ +T N  +         
Sbjct: 187 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMI--------- 237

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
             DG            K      GF++ + MLQ    P   T+  ++  LCR  R+ 
Sbjct: 238 --DGH----------VKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMD 282


>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g38730-like [Vitis vinifera]
          Length = 590

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/415 (32%), Positives = 216/415 (52%), Gaps = 10/415 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLF-HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           S++ IF  Y  + + ++AI++F H  V  F  K  + +   +LN + +  L +   + Y 
Sbjct: 131 SWLVIF--YANSRMTQDAIQVFEHMRVHGF--KPHLHACTVLLNSLAKARLTNMVWKVYK 186

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +V    + ++PN   FN++I   C+ G V+ A QL  EM  R   PD++TY TL+   C
Sbjct: 187 KMVR---VGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYC 243

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K+    EA+ + D M+  G  P  VT+N LI G C+ G +  A +L     + G  PN V
Sbjct: 244 KKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHV 301

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY TLI G C   +L++A+ L + M      P  VTY +I+  L + G+  D  R+L  M
Sbjct: 302 TYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 361

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            ERK   +    +TLI+   K G    AMK+ K+M+E G KP+   + ALI G C++ + 
Sbjct: 362 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 421

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D A+E LFEM++ G + +  TYS L+  +++       + +  ++++     +   Y  L
Sbjct: 422 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 481

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           I  LC+  K+  A  ++T M  +G K D V Y+S+ +    AG    A  + +EM
Sbjct: 482 IRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 194/381 (50%), Gaps = 8/381 (2%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  +  A  K+  VE+A +L + M   F     + ++N+++++  ++G+++ AL   + +
Sbjct: 200 FNVLIHACCKSGDVEKAEQLLNEMESRF-IFPDLFTYNTLISLYCKKGMHYEALGIQDRM 258

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +   + P+ +T+N +I   CR G +  A++LFRE  +    P+  TY TL+DG C+ 
Sbjct: 259 ---ERGGVSPDIVTYNSLIYGFCREGRMREALRLFRE--INGATPNHVTYTTLIDGYCRV 313

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           N L+EA+ L + M+V+G  P  VT+N ++  LC+ G++  A +L++ M  +   P+ VT 
Sbjct: 314 NDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTC 373

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTLI+  C  G++  A+ +  +M+ +   P++ T+  +I+G  KL         L  M +
Sbjct: 374 NTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLD 433

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
             F  +   YS L+   + +   E  ++L  ++  KG   +  VY ALI  LC++ K + 
Sbjct: 434 AGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIES 493

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           AE I   M   G   ++  Y+SL   +F++GK   A ++  +M K   +     Y     
Sbjct: 494 AERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSA 553

Query: 481 GLCEDGKLREARMVWTQMLSR 501
               DG +    + W  ++ R
Sbjct: 554 SYAGDGSI--LGLFWDHVIER 572



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 161/335 (48%), Gaps = 4/335 (1%)

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +A+ + + M+V G  P      VL+N L K        K+   M   G +PN   +N LI
Sbjct: 145 DAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLI 204

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           H  C  G+++KA  LL+ M +    P+  TY T+I+   K G   +   +   ME     
Sbjct: 205 HACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVS 264

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y++LI G  +EG+  +A++L++++   G  PN V Y+ LIDG CRV   +EA  +
Sbjct: 265 PDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRL 322

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              M   G      TY+S+++   E GK   A  +  +M++     + V  + LI+  C+
Sbjct: 323 REVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCK 382

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G +  A  V  +ML  G KPD   + ++IHG C    V+ A +   EM  L+    P  
Sbjct: 383 IGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEM--LDAGFSPSY 440

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            TY+ L+++   Q N    I L + +  +G   D+
Sbjct: 441 STYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDI 475



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 192/440 (43%), Gaps = 42/440 (9%)

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING----------------LCKN 275
           T++  L K  +   A  LL+ + V     +P   N ++                     N
Sbjct: 80  TMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYAN 139

Query: 276 GELGR-AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
             + + A ++ ++M + G  P+      L++ L      +    +  +MV    +PN   
Sbjct: 140 SRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHI 199

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           +  +I+   K G      ++L  ME R    + + Y+TLIS   K+G   +A+ +  +M 
Sbjct: 200 FNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRME 259

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
             G  P+ V Y++LI G CR G+  EA  +  E+  NG   N  TY++L+ G+       
Sbjct: 260 RGGVSPDIVTYNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLE 317

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A+ + + M         V Y+ ++  LCE+GK+++A  +  +M  R  +PD V  +++I
Sbjct: 318 EALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLI 377

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +  C  G +  A+K+  +ML  E   +PD FT+  L++  CK   +  + + L  M+D G
Sbjct: 378 NAYCKIGDMGSAMKVKKKML--EAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAG 435

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             P   T +  + +  +     QD      E  IRL       G F              
Sbjct: 436 FSPSYSTYSWLVDSYYD-----QDN----KEAVIRLPDELSRKGLF------------VD 474

Query: 635 TSTWERVVQELCRPKRIQAA 654
            S +  +++ LC+  +I++A
Sbjct: 475 ISVYRALIRRLCKIDKIESA 494


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 222/419 (52%), Gaps = 6/419 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +F +++  +  +G  H+AL F++++V    M    + + +  +I  +C++G    A+ L 
Sbjct: 129 TFTTLIKGLCLKGQIHQALLFHDNVVA---MGFQLDQVGYGTLIHGLCKVGETRAALDLL 185

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R +     +P++  Y T++DG+CK+  +++A  L  EM   G  P  VT++ LI+G    
Sbjct: 186 RRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTV 245

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A  L + M L+   P+  T+N L+ G C  G + +  ++   M+     PN VTY
Sbjct: 246 GQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTY 305

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++++G   +        +L +M +R  + +   Y+ LI G  K  K ++AM L+K+M  
Sbjct: 306 CSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHH 365

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P+ V Y++LIDGLC++GK   A +++ EM + G   +  TYSS++    ++ +  K
Sbjct: 366 KHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDK 425

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ +   +       N   Y++LI GLC+ G+L +A  ++  +L +G    V  Y+ MIH
Sbjct: 426 AIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIH 485

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           G CN G  +EAL L ++M   +    PD  TY I++ +L  +   +   + L  M+ RG
Sbjct: 486 GFCNKGLFDEALALLSKM--KDNSCIPDAVTYEIIIRSLFDKDE-NDKAEKLREMITRG 541



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 234/489 (47%), Gaps = 18/489 (3%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH---------IVNAK 184
           V +A  LF  ++ +      ++ FN +L  +++   YH  L              + + +
Sbjct: 57  VVDAFSLFSRLLRQNPTPPAIE-FNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQ 115

Query: 185 H----MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           H    M   PNT+TF  +IK +C  G +  A+     +     + D   Y TL+ GLCK 
Sbjct: 116 HPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKV 175

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
                A+ LL  +  +   P  V ++ +I+G+CK+  +  A  L   M  KG  PN VTY
Sbjct: 176 GETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 235

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           + LI G    G L  A+ L ++M+     P+  T+  +++G  K G+  +G  V   M +
Sbjct: 236 SALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK 295

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           +    N   Y +L+ G     +   A  +   M ++G  P+   Y+ LIDG C++ K DE
Sbjct: 296 QGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDE 355

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  +  EM +     +  TY+SL+ G  + GK   A+++  +M       + + YS ++ 
Sbjct: 356 AMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILD 415

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
            LC++ ++ +A  + T++  +G +P++  Y+ +I GLC  G +E+A  +F ++L      
Sbjct: 416 ALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLV--KGY 473

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
              V TY ++++  C +     ++ LL+ M D  C PD VT  I + +L +K E   D  
Sbjct: 474 NITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDE--NDKA 531

Query: 601 DFLNELAIR 609
           + L E+  R
Sbjct: 532 EKLREMITR 540



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 200/441 (45%), Gaps = 42/441 (9%)

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           F  +P  + + +   Y ++       N + +A  L   +      P  + FN ++  L K
Sbjct: 29  FNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVK 88

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
           +        L   M  +G  P    +    H   L G                  PN +T
Sbjct: 89  SKHYHTVLSLSQQMEFEGINPVLFHFQ---HPHQLMG----------------YHPNTIT 129

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           + T+I GL   G+         ++    F +++  Y TLI GL K G+   A+ L +++ 
Sbjct: 130 FTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVD 189

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
               +PN V+YS +IDG+C+    ++A ++  EM++ G + N  TYS+L+ GFF  G+  
Sbjct: 190 GNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLK 249

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A++++  M   N   +   +++L+ G C+DGK++E + V+  M+ +G KP+VV Y S++
Sbjct: 250 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 309

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G C    V +A  +   M   +    PD+ +YNIL++  CK   +  +++L   M  + 
Sbjct: 310 DGYCLVKEVNKAKSILYTMS--QRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH 367

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
             PD+VT N  +           DG          L K  + S   K+V+ M  + + P 
Sbjct: 368 IIPDVVTYNSLI-----------DG----------LCKLGKISYALKLVDEMHDRGVPPD 406

Query: 635 TSTWERVVQELCRPKRIQAAI 655
             T+  ++  LC+  ++  AI
Sbjct: 407 IITYSSILDALCKNHQVDKAI 427



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 134/261 (51%), Gaps = 25/261 (9%)

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  PNT+ ++ LI GLC  G+  +A      ++  G   +   Y +L+ G  + G+   A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           +++ + +  N    N V YS +I G+C+D  + +A  ++++M+S+G  P+VV YS++I G
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 241

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
               G +++A+ LFN+M+    K  PDV+T+NIL++  CK   +     +   MM +G  
Sbjct: 242 FFTVGQLKDAIDLFNKMILENIK--PDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299

Query: 577 PDLVT-CNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
           P++VT C++             DG   + E+          +    I+  M Q+ ++P  
Sbjct: 300 PNVVTYCSL------------MDGYCLVKEV----------NKAKSILYTMSQRGVNPDI 337

Query: 636 STWERVVQELCRPKRIQAAIN 656
            ++  ++   C+ K++  A+N
Sbjct: 338 QSYNILIDGFCKIKKVDEAMN 358


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 139/501 (27%), Positives = 255/501 (50%), Gaps = 24/501 (4%)

Query: 104 MVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV------DEFHCKRTVKSF 157
           MV   +  EK    EK F  +F+ Y    + EE +R+F  MV      DE  C   + + 
Sbjct: 121 MVDCDISEEKFEFWEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAA 180

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
                + +        LEF+  +V++    +     +  +V++ +CR G V+ + +L +E
Sbjct: 181 KKRRRIDL-------CLEFFRRMVDS---GVKITVYSLTIVVEGLCRRGEVEKSKKLIKE 230

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
              +  +P+ YTY T+++   K         +L  M+ DG     VT+ +LI    KNG+
Sbjct: 231 FSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGK 290

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +    KL D M  +G   +   Y +LI   C KGN+ +A  L D +     +P+  TYG 
Sbjct: 291 MNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGA 350

Query: 338 IINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           +I+G+ K+G  +  A +LM+ M+ +  ++ + +++TLI+G  ++G  ++A  ++  M +K
Sbjct: 351 LIDGVCKVGE-MGAAEILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKK 409

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G + +    + +     R+ + DEA++ LF M+  G   +  +Y++L+  + + G   +A
Sbjct: 410 GFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEA 469

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
             ++ +M+      N + Y+V+I+  C+ GK++EAR +W  M + G  PD   Y+S+IHG
Sbjct: 470 KRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHG 529

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            C A +V+EA++LF+EM  L+   Q  V TY ++++ L K      +  L + +  +G  
Sbjct: 530 ECIADNVDEAMRLFSEM-GLKGLDQNSV-TYTVMISGLSKAGKSDEAFGLYDEIKRKGYT 587

Query: 577 PDLVTCNIFLTALKEKLEAPQ 597
            D    N   TAL   + +P+
Sbjct: 588 ID----NKVYTALIGSMHSPE 604



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 132/465 (28%), Positives = 226/465 (48%), Gaps = 34/465 (7%)

Query: 86  FYSLI-QHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           F+ L+ + Y ++G F+    V   M ++   + E+S I    A  K   ++  +  F  M
Sbjct: 137 FFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRM 196

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------------YNHIVNA--KHMN 187
           VD    K TV S   V+  + + G   ++ +                YN I+NA  KH +
Sbjct: 197 VDS-GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRD 255

Query: 188 ---------------ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
                          ++ N +T+ L+I+   + G +++  +LF EM  R  E DI+ Y +
Sbjct: 256 FSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTS 315

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+   C++  +  A LL DE+   G  P+  T+  LI+G+CK GE+G A  L++ M  KG
Sbjct: 316 LISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKG 375

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
               +V +NTLI+G C KG +D+A  + D M       +  T  TI +   +L R  +  
Sbjct: 376 VNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAK 435

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           + L  M E    ++   Y+ LI    KEG  E+A +L+ +M  K  +PN + Y+ +I   
Sbjct: 436 QWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAY 495

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ GK  EA ++   M  NG   +++TY+SL+ G   +    +A+ ++ +M       N 
Sbjct: 496 CKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNS 555

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           V Y+V+I GL + GK  EA  ++ ++  +G   D   Y+++I  +
Sbjct: 556 VTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIGSM 600



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 192/491 (39%), Gaps = 105/491 (21%)

Query: 192 TLTFNLVIKTVCRLGLVDNAI---------QLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           +L FNL    V RL L D ++         +  RE    N +PD+    TL   L    R
Sbjct: 36  SLLFNLN-SNVTRLVLSDPSLATQSCIDFFKFLREFE-SNLKPDLTAVVTLSHRLYSNRR 93

Query: 243 LDEAVLLLDEMQVDGCFPTPVT----------------------FNVLINGLCKNGELGR 280
             E  LLL+ +  DG +  PV                       F+++      NG    
Sbjct: 94  FSEMRLLLNSVVNDGFYERPVEGLGSAMVDCDISEEKFEFWEKFFDLVFRVYVDNGMFEE 153

Query: 281 AAKLVDNMFLKGCLPNE-----------------------------------VTYNTLIH 305
             ++ D M  KG   +E                                    +   ++ 
Sbjct: 154 GLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFRRMVDSGVKITVYSLTIVVE 213

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC +G ++K+  L+         P   TY TIIN  +K        ++L  M++     
Sbjct: 214 GLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHRDFSGVEKILKVMKKDGVVY 273

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N+  Y+ LI    K GK  D  KL+ +M E+G + +  VY++LI   CR G    A  + 
Sbjct: 274 NKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYTSLISWNCRKGNIKRAFLLF 333

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+   G   ++ TY +L+ G  + G+   A  +  +M        +V ++ LI+G C  
Sbjct: 334 DELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLINGYCRK 393

Query: 486 GKLREARMVWTQMLSRGCKPDV-----------------------------------VAY 510
           G + EA M++  M  +G + DV                                   V+Y
Sbjct: 394 GMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVRLSTVSY 453

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++I   C  G+VEEA +LF EM   E   QP+  TYN+++ A CKQ  +  +  L  +M
Sbjct: 454 TNLIDVYCKEGNVEEAKRLFVEMSSKEV--QPNAITYNVMIYAYCKQGKVKEARKLWANM 511

Query: 571 MDRGCDPDLVT 581
              G DPD  T
Sbjct: 512 KANGMDPDSYT 522


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 210/392 (53%), Gaps = 10/392 (2%)

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
           +VD+AI  F  M + +  P I  +  ++  L K      A+ L  +M+V G  P  VT N
Sbjct: 32  VVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLN 91

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +LIN  C  G++  +  ++  +   G  PN +T  TL+ GLCLKG + K+V   D++VA 
Sbjct: 92  ILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQ 151

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
               N+V+YGT++NGL K+G      + L  +E+    +N  +Y+T+I GL K+    +A
Sbjct: 152 GFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEA 211

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
              + +M  +G  PN + Y+ LI G C  G+   A  +L EMI      N +TY+ L+  
Sbjct: 212 YDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDA 271

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             + GK  +A  +  +M       + V Y+ L+ G C++  L +A  ++ +M   G +P+
Sbjct: 272 LCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPN 331

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEML----CLEPKSQPDVFTYNILLNALCKQSNISH 562
              Y+++I GLC  G +++A KLF ++L    C+      DV TYN+++  LCK+  +  
Sbjct: 332 KYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCI------DVCTYNVMIGGLCKEGMLDE 385

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
           ++ + + M D GC P++VT  I + +L +K E
Sbjct: 386 ALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDE 417



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 200/389 (51%), Gaps = 2/389 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M+  P  + F  ++  + ++     AI L ++M V+  EP++ T   L++  C   ++  
Sbjct: 46  MHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSF 105

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           +  +L ++   G  P  +T   L+ GLC  GE+ ++    D +  +G   N+V+Y TL++
Sbjct: 106 SFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLN 165

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GLC  G    A+  L  +  S    N V Y TII+GL K     +       M  R    
Sbjct: 166 GLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFP 225

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y+TLI G    G+   A  L  +M+ K   PN   Y+ LID LC+ GK  EA+ +L
Sbjct: 226 NVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLL 285

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM   G  A+  TY+SL+ GF ++    KA  ++  M +     N+  Y+ LI GLC+ 
Sbjct: 286 AEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKG 345

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G+L++A+ ++  +L +GC  DV  Y+ MI GLC  G ++EAL + ++M   +    P+V 
Sbjct: 346 GRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKM--EDNGCIPNVV 403

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRG 574
           T+ I++ +L K+     +  LL+ M+ +G
Sbjct: 404 TFEIIIRSLFKKDENDKAEKLLHEMIAKG 432



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 200/406 (49%), Gaps = 16/406 (3%)

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +N +D+A+   + M +    P  V F  ++  L K      A  L   M +KG  PN VT
Sbjct: 30  DNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVT 89

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
            N LI+  C  G +  + S+L +++     PN +T  T++ GL   G           + 
Sbjct: 90  LNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVV 149

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            + F +N+  Y TL++GL K G+   A+K  + + +     N V+Y+ +IDGLC+    +
Sbjct: 150 AQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVN 209

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA +   EM   G   N  TY++L+ GF  +G+   A  +  +M   N   N   Y++LI
Sbjct: 210 EAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILI 269

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
             LC++GK++EA+ +  +M  RG   DVV Y+S++ G C   ++++A  LF +M   E  
Sbjct: 270 DALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKM--KEWG 327

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL------------T 587
            QP+ +TY  L++ LCK   +  +  L   ++ +GC  D+ T N+ +             
Sbjct: 328 IQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEAL 387

Query: 588 ALKEKLEAPQDGTDFLN-ELAIR-LFKRQRTSGGFKIVEVMLQKFL 631
           A+K K+E      + +  E+ IR LFK+       K++  M+ K L
Sbjct: 388 AIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 139/292 (47%), Gaps = 38/292 (13%)

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M+++      V  +N++++ + ++ L + A +FY+ + NA+   I PN +T+  +I 
Sbjct: 179 FLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEM-NAR--GIFPNVITYTTLIG 235

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C  G +  A  L  EM ++N  P++YTY  L+D LCKE ++ EA  LL EM   G   
Sbjct: 236 GFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPA 295

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             VT+  L++G CKN  L +A  L   M   G  PN+ TY  LI GLC  G L  A  L 
Sbjct: 296 DVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLF 355

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             ++   C  +  TY  +I GL                                    KE
Sbjct: 356 QDLLVKGCCIDVCTYNVMIGGLC-----------------------------------KE 380

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           G  ++A+ +  +M + GC PN V +  +I  L +  + D+AE++L EMI  G
Sbjct: 381 GMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKG 432



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 66/111 (59%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   I PN  T+  +I  +C+ G + +A +LF+++ V+ C  D+ TY  ++ GLCKE  L
Sbjct: 324 KEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGML 383

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           DEA+ +  +M+ +GC P  VTF ++I  L K  E  +A KL+  M  KG L
Sbjct: 384 DEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGLL 434



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 61/287 (21%), Positives = 124/287 (43%), Gaps = 58/287 (20%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +  ++  L K      A+ L KQM  KG +PN V  + LI+  C +G+   +  +L +++
Sbjct: 55  FGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKIL 114

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   N  T ++LMKG                                   LC  G+++
Sbjct: 115 KLGYQPNTITLTTLMKG-----------------------------------LCLKGEVQ 139

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           ++     +++++G + + V+Y ++++GLC  G    A+K     +  +  +  +V  YN 
Sbjct: 140 KSVHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLR--MIEDSSTGLNVVMYNT 197

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +++ LCK   ++ + D  + M  RG  P+++T    +                   LA +
Sbjct: 198 IIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFC---------------LAGQ 242

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           L      +G F ++  M+ K ++P   T+  ++  LC+  +++ A N
Sbjct: 243 L------TGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKN 283


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/394 (33%), Positives = 202/394 (51%), Gaps = 18/394 (4%)

Query: 201 TVCRLGLVDNAIQLFR-------EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T   LG + + IQ FR        +P+R C         L+D + K N          E+
Sbjct: 179 TYMDLGFIPDVIQCFRLSRKHNFVVPIRGCG-------NLLDRMMKLNPTGTVWGFYMEI 231

Query: 254 QVDGCFPTPV-TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
            +D  FP  V  FN+L+N  CK G +  A K+ D +  +   P  V++NTLI+G C  GN
Sbjct: 232 -LDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGN 290

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           LD    L   M  S+  P+  TY  +IN L K  +     R+   M ER    N+ I++T
Sbjct: 291 LDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTT 350

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI G  + G+ +   + +++M+ KG +P+ V+Y+ L++G C+ G    A  I+  MI  G
Sbjct: 351 LIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              +  TY++L+ GF   G    A+EI K+M +N    + V +S LI G+C++G++ +A 
Sbjct: 411 LRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAE 470

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
               +ML  G KPD V Y+ M+   C  G  +   KL  EM        P+V TYN+LLN
Sbjct: 471 RALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ--SDGHIPNVVTYNVLLN 528

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            LCK   + ++  LL++M++ G  PD +T N  L
Sbjct: 529 GLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLL 562



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 200/384 (52%), Gaps = 10/384 (2%)

Query: 176 FYNHIVNAKHMNILP-NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           FY  I++A      P N   FN+++   C+ G + +A ++F E+  R+  P + ++ TL+
Sbjct: 227 FYMEILDAG----FPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLI 282

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +G CK   LD    L   M+     P   T++ LIN LCK  ++  A +L   M  +G +
Sbjct: 283 NGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLI 342

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN+V + TLIHG    G +D       +M++    P+ V Y T++NG  K G  V    +
Sbjct: 343 PNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           +  M  R    ++  Y+TLI G  + G  + A+++ K+M + G + + V +SALI G+C+
Sbjct: 403 VDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCK 462

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G+  +AE  L EM+  G   +  TY+ +M  F + G      ++ K+M  +  + N V 
Sbjct: 463 EGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVT 522

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+VL++GLC+ G+++ A M+   ML+ G  PD + Y++++ G     +  +  K   E+ 
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEGHHRHANASKHYKQKPEIG 582

Query: 535 CLEPKSQPDVFTYNILLNALCKQS 558
            +      D+ +Y  L+N L + S
Sbjct: 583 IVA-----DLASYKSLVNELYRAS 601



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 152/294 (51%), Gaps = 2/294 (0%)

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N   +N L++  C +GN+  A  + D +      P  V++ T+ING  K+G    G R+ 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             ME+ +   + + YS LI+ L KE K + A +L+ +M E+G  PN V+++ LI G  R 
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRN 358

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G+ D  +E   +M++ G   +   Y++L+ GF ++G    A  I   M +     ++V Y
Sbjct: 359 GQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY 418

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + LI G C  G +  A  +  +M   G + D V +S++I G+C  G V +A +   EML 
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREML- 477

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                +PD  TY ++++A CK+ +      LL  M   G  P++VT N+ L  L
Sbjct: 478 -RAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGL 530



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 134/276 (48%), Gaps = 3/276 (1%)

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N   +  ++N   K G   D  +V   + +R        ++TLI+G  K G  +   +L 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M +   +P+   YSALI+ LC+  K D A  + +EM   G   N   +++L+ G   +
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRN 358

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G+     E ++ M       + V Y+ L++G C++G L  AR +   M+ RG +PD V Y
Sbjct: 359 GQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY 418

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++I G C  G V+ AL++  EM   +   + D   ++ L+  +CK+  +  +   L  M
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMD--QNGIELDRVGFSALICGMCKEGRVIDAERALREM 476

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           +  G  PD VT  + + A  +K +A Q G   L E+
Sbjct: 477 LRAGMKPDDVTYTMMMDAFCKKGDA-QTGFKLLKEM 511



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/333 (22%), Positives = 146/333 (43%), Gaps = 51/333 (15%)

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
           G +++ ++KL          M + +  F +N Y+++ L++   KEG   DA K++ ++ +
Sbjct: 209 GNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITK 268

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +  +P  V ++ LI+G C+VG  D    +   M  +    + FTYS+L            
Sbjct: 269 RSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSAL------------ 316

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
                                  I+ LC++ K+  A  ++ +M  RG  P+ V ++++IH
Sbjct: 317 -----------------------INALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIH 353

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G    G ++   + + +M  L    QPD+  YN L+N  CK  ++  + ++++ M+ RG 
Sbjct: 354 GHSRNGQIDLMKESYQKM--LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411

Query: 576 DPDLVTCNIFL----------TALKEKLEAPQDGTDF----LNELAIRLFKRQRTSGGFK 621
            PD VT    +          TAL+ + E  Q+G +      + L   + K  R     +
Sbjct: 412 RPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAER 471

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            +  ML+  + P   T+  ++   C+    Q  
Sbjct: 472 ALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTG 504


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/506 (26%), Positives = 253/506 (50%), Gaps = 6/506 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+ ++ +  +  G  K     L +MR    V+   S+  +     K+    EA+ ++  
Sbjct: 154 NTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 213

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ E   + ++++++S++   +  G           +   + + + PN  TF + I+ + 
Sbjct: 214 MILEGF-RPSLQTYSSLM---VGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G ++ A ++ + M    C PD+ TY  L+D LC   +LD A  + ++M+     P  V
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  L++    N +L    +    M   G +P+ VT+  L+  LC  GN  +A   LD M
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                +PN  TY T+I GL+++ R  D   +  +ME        Y Y   I    K G +
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             A++ +++M  KG  PN V  +A +  L + G+  EA++I + + + G   ++ TY+ +
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           MK + + G+  +A+++  +M +N C  + +  + LI+ L +  ++ EA  ++ +M     
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           KP VV Y++++ GL   G ++EA++LF  M  ++    P+  T+N L + LCK   ++ +
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGM--VQKGCPPNTITFNTLFDCLCKNDEVTLA 627

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + +L  MMD GC PD+ T N  +  L
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGL 653



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 157/576 (27%), Positives = 267/576 (46%), Gaps = 59/576 (10%)

Query: 83   DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
            +++ YSL    A +G  +  + + Y ++    V    ++  + K Y K   ++EAI+L  
Sbjct: 472  NASLYSL----AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527

Query: 143  TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             M+ E  C+  V   NS++N + +     R  E +   +  K M + P  +T+N ++  +
Sbjct: 528  EMM-ENGCEPDVIVVNSLINTLYKA---DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583

Query: 203  CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
             + G +  AI+LF  M  + C P+  T+ TL D LCK + +  A+ +L +M   GC P  
Sbjct: 584  GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643

Query: 263  VTFNVLINGLCKNGELGRA---------------------------AKLVDNM------F 289
             T+N +I GL KNG++  A                           A L+++       F
Sbjct: 644  FTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703

Query: 290  LKGCL--PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLG 346
            L  C   P  + +  LI  +  +  +D AVS  +R+VA+  C   +     II    K  
Sbjct: 704  LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN 763

Query: 347  RAVDGARVLMSMEERKFHVNEYI--YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
              V GAR L     +   V   +  Y+ LI GL +    E A  ++ Q+   GC P+   
Sbjct: 764  N-VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822

Query: 405  YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
            Y+ L+D   + GK DE  E+  EM  + C AN  T++ ++ G  ++G    A++++ D+ 
Sbjct: 823  YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882

Query: 465  KNNCVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
             +       C Y  LI GL + G+L EA+ ++  ML  GC+P+   Y+ +I+G   AG  
Sbjct: 883  SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942

Query: 524  EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            + A  LF  M+  +   +PD+ TY++L++ LC    +   +     + + G +PD+V  N
Sbjct: 943  DAACALFKRMV--KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000

Query: 584  IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
            + +  L         G     E A+ LF   +TS G
Sbjct: 1001 LIINGL---------GKSHRLEEALVLFNEMKTSRG 1027



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 150/645 (23%), Positives = 276/645 (42%), Gaps = 104/645 (16%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI     +      + V  +M+  +      ++I +   +     ++   + +  M
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             + H    V +F  +++ + + G +  A +  + +   +   ILPN  T+N +I  + R
Sbjct: 355 EKDGHVPDVV-TFTILVDALCKAGNFGEAFDTLDVM---RDQGILPNLHTYNTLICGLLR 410

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +  +D+A++LF  M     +P  YTY   +D   K      A+   ++M+  G  P  V 
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            N  +  L K G    A ++   +   G +P+ VTYN ++      G +D+A+ LL  M+
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C P+ +   ++IN L K  R  +  ++ M M+E K       Y+TL++GL K GK +
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A++L++ M++KGC PNT+ ++ L D LC+  +   A ++LF+M++ GC  + FTY++++
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650

Query: 445 KGFFESGKGHKAV----------------------------------------------- 457
            G  ++G+  +A+                                               
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710

Query: 458 ---EIWKDMAKN----NCVYNEVCYS--VLIHGLCEDGK---------------LREARM 493
                W+D+  +      + N V +S  ++ +G+C DG                +  AR 
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 770

Query: 494 VWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNI 549
           ++ +     G +P +  Y+ +I GL  A  +E A  +F     L+ KS    PDV TYN 
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-----LQVKSTGCIPDVATYNF 825

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           LL+A  K   I    +L   M    C+ + +T NI ++ L  K     D  D   +L   
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV-KAGNVDDALDLYYDL--- 881

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                           M  +  SP   T+  ++  L +  R+  A
Sbjct: 882 ----------------MSDRDFSPTACTYGPLIDGLSKSGRLYEA 910



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 141/573 (24%), Positives = 257/573 (44%), Gaps = 66/573 (11%)

Query: 108  RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE 167
            RM+  K      ++  +    GK   ++EAI LF  MV +  C     +FN++ + + + 
Sbjct: 563  RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLCKN 621

Query: 168  GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
                 AL+    +++   M  +P+  T+N +I  + + G V  A+  F +M  +   PD 
Sbjct: 622  DEVTLALKMLFKMMD---MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 677

Query: 228  YTYCTLMDGLCKENRLDEAVL--------------------LLDEMQVDGCFPTPVTFN- 266
             T CTL+ G+ K + +++A                      L+  +  +      V+F+ 
Sbjct: 678  VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737

Query: 267  -VLINGLCKNGEL--------------GRAAKLVDNMFLK--GCLPNEVTYNTLIHGLCL 309
             ++ NG+C++G+                  A+ +   F K  G  P   TYN LI GL  
Sbjct: 738  RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797

Query: 310  KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
               ++ A  +  ++ ++ C+P+  TY  +++   K G+  +   +   M   +   N   
Sbjct: 798  ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857

Query: 370  YSTLISGLFKEGKAEDAMKLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ +ISGL K G  +DA+ L+  +M ++   P    Y  LIDGL + G+  EA+++   M
Sbjct: 858  HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917

Query: 429  INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            ++ GC  N   Y+ L+ GF ++G+   A  ++K M K     +   YSVL+  LC  G++
Sbjct: 918  LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977

Query: 489  REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             E    + ++   G  PDVV Y+ +I+GL  +  +EEAL LFNEM      + PD++TYN
Sbjct: 978  DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT-PDLYTYN 1036

Query: 549  ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
             L+  L     +  +  + N +   G +P++ T N  +                      
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS------------------ 1078

Query: 609  RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
                  +    + + + M+    SP T T+E++
Sbjct: 1079 ---LSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/487 (25%), Positives = 214/487 (43%), Gaps = 53/487 (10%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +    + N  ++N +I  + +      A++++R M +    P + TY +LM GL K   +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D  + LL EM+  G  P   TF + I  L + G++  A +++  M  +GC P+ VTY  L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  LC    LD A  + ++M   +  P+ VTY T+++                       
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD----------------------- 336

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMK-LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
                         F + +  D++K  W +M + G  P+ V ++ L+D LC+ G   EA 
Sbjct: 337 -------------RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           + L  M + G   N  TY++L+ G     +   A+E++ +M           Y V I   
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            + G    A   + +M ++G  P++VA ++ ++ L  AG   EA ++F  +   +    P
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL--KDIGLVP 501

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           D  TYN+++    K   I  +I LL+ MM+ GC+PD++  N  +  L +     +    F
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561

Query: 603 L--------------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
           +              N L   L K  +     ++ E M+QK   P T T+  +   LC+ 
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621

Query: 649 KRIQAAI 655
             +  A+
Sbjct: 622 DEVTLAL 628



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 5/212 (2%)

Query: 130  KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
            K+  + EA +LF  M+D + C+     +N ++N   + G    A   +  +V      + 
Sbjct: 903  KSGRLYEAKQLFEGMLD-YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE---GVR 958

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            P+  T+++++  +C +G VD  +  F+E+      PD+  Y  +++GL K +RL+EA++L
Sbjct: 959  PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018

Query: 250  LDEMQVD-GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
             +EM+   G  P   T+N LI  L   G +  A K+ + +   G  PN  T+N LI G  
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078

Query: 309  LKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
            L G  + A ++   MV     PN  TY  + N
Sbjct: 1079 LSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 153/546 (28%), Positives = 252/546 (46%), Gaps = 82/546 (15%)

Query: 121 FIFIFKAY---GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ---EGLYHRAL 174
           F     AY   GK H+   A+++F  M+     K  + + N++L  +++         A 
Sbjct: 134 FDIALSAYLHEGKPHV---ALQIFQKMI-RLKLKPNLLTCNTLLIGLVRYPSSFSISSAR 189

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR-NCEPDIYTYCTL 233
           E ++ +V    + +  N  TFN+++   C  G +++A+ +   M       PD  TY T+
Sbjct: 190 EVFDDMVK---IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +  + K+ RL +   LL +M+ +G  P  VT+N L+ G CK G L  A ++V+ M     
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           LP+  TYN LI+GLC  G++ + + L+D M + K  P+ VTY T+I+G  +LG +++  +
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366

Query: 354 VLMSMEERKFHVNEYI------------------------------------YSTLISGL 377
           ++  ME      N+                                      Y TLI   
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K G    A+++ ++M +KG K NT+  + ++D LC+  K DEA  +L      G   + 
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY +L+ GFF   K  KA+E+W +M K         ++ LI GLC  GK   A   + +
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------LCLEPK 539
           +   G  PD   ++S+I G C  G VE+A + +NE                   LC E  
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606

Query: 540 SQP--------------DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           ++               D  TYN +++A CK   +  + DLL+ M ++G +PD  T N F
Sbjct: 607 TEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666

Query: 586 LTALKE 591
           ++ L E
Sbjct: 667 ISLLME 672



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 126/482 (26%), Positives = 217/482 (45%), Gaps = 73/482 (15%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           ++F  +   Y     +E+A+ +   MV EF       ++N++L  + ++G   R  +   
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG---RLSDLKE 261

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +++ K   ++PN +T+N ++   C+LG +  A Q+   M   N  PD+ TY  L++GLC
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLC 321

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF--------- 289
               + E + L+D M+     P  VT+N LI+G  + G    A KL++ M          
Sbjct: 322 NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQV 381

Query: 290 ---------------------------LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
                                      + G  P+ VTY+TLI      G+L  A+ ++  
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M       N +T  TI++ L K  +  +   +L S  +R F V+E  Y TLI G F+E K
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            E A+++W +M +    P    +++LI GLC  GK + A E   E+  +G   +  T++S
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561

Query: 443 LMKGFFESGKGHKAVEIWKDMAKN---------NCVYNEVC------------------- 474
           ++ G+ + G+  KA E + +  K+         N + N +C                   
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621

Query: 475 ------YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
                 Y+ +I   C+D KL+EA  + ++M  +G +PD   Y+S I  L   G + E  +
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681

Query: 529 LF 530
           L 
Sbjct: 682 LL 683



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 212/480 (44%), Gaps = 77/480 (16%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK---EN 241
           H++  P+   F++ +      G    A+Q+F++M     +P++ T  TL+ GL +     
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC---------------------------- 273
            +  A  + D+M   G      TFNVL+NG C                            
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243

Query: 274 --------KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
                   K G L    +L+ +M   G +PN VTYN L++G C  G+L +A  +++ M  
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +  +P+  TY  +INGL   G   +G  ++ +M+  K   +   Y+TLI G F+ G + +
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYSSLM 444
           A KL +QM   G K N V ++  +  LC+  K +     + E+++ +G + +  TY +L+
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423

Query: 445 KGFFESGKGHKAVEIWKDMA-----------------------------------KNNCV 469
           K + + G    A+E+ ++M                                    K   +
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +EV Y  LI G   + K+ +A  +W +M      P V  ++S+I GLC+ G  E A++ 
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+E+   E    PD  T+N ++   CK+  +  + +  N  +     PD  TCNI L  L
Sbjct: 544 FDEL--AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 162/336 (48%), Gaps = 13/336 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T++ +IK   ++G +  A+++ REM  +  + +  T  T++D LCKE +LDEA  L
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+     G     VT+  LI G  +  ++ +A ++ D M      P   T+N+LI GLC 
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G  + A+   D +  S  +P++ T+ +II G  K GR            +  F  + Y 
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            + L++GL KEG  E A+  +  ++E+  + +TV Y+ +I   C+  K  EA ++L EM 
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   + FTY+S +    E GK  +  E+ K             +S     +  D ++ 
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSETDELLKK------------FSGKFGSMKRDLQVE 700

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
             +   T         + +AYS +I  LC+ G ++E
Sbjct: 701 TEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 13/212 (6%)

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           +V E ++  +   + +   VE+A+ ++  M  +     TV +FNS++  +   G    A+
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEM-KKVKITPTVSTFNSLIGGLCHHGKTELAM 541

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E ++ +  +    +LP+  TFN +I   C+ G V+ A + + E    + +PD YT   L+
Sbjct: 542 EKFDELAES---GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598

Query: 235 DGLCKENRLDEAV----LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
           +GLCKE   ++A+     L++E +VD      VT+N +I+  CK+ +L  A  L+  M  
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEEREVD-----TVTYNTMISAFCKDKKLKEAYDLLSEMEE 653

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           KG  P+  TYN+ I  L   G L +   LL +
Sbjct: 654 KGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685


>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 642

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 149/527 (28%), Positives = 265/527 (50%), Gaps = 13/527 (2%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF-IFK 126
           + F    K  +++   S+F +LI     +G +  +   +  M R    V+   ++  I K
Sbjct: 112 QFFKWAGKRRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVK 171

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             GKA +V +A+ +F+ +     CK    ++NS++ ++ QEG   +  E YN + N    
Sbjct: 172 LLGKAKMVNKALSVFYQIKGR-KCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDG-- 228

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N  P+T+T++ +I    +LG  D+AI+LF EM      P    Y TL+    K +++++A
Sbjct: 229 NCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKA 288

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + ++ EM+  GC  T  T+   I GL K G +  A ++  +M   GC P+ V  N+LI+ 
Sbjct: 289 LDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINI 348

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHV 365
           L   G L+  + L  +M + +C PN VTY T+I  L +    A + A     M+      
Sbjct: 349 LGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAP 408

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS LI G  K  + E A+ L ++M EKG  P    Y +LI+ L +V + + A E+ 
Sbjct: 409 SSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELF 468

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+  N   ++A  Y+ ++K F + G+  +AV+++ +M K     +   Y+ L+ G+   
Sbjct: 469 LELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRA 528

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS---QP 542
           G + EA+ +   M   GC PD+ +++ +++GL   G  + A+++F +M     KS   +P
Sbjct: 529 GMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKM-----KSSIIKP 583

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           D  +YN +L  L        +  L+  M  +G + + +T    L A+
Sbjct: 584 DAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAV 630



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 135/286 (47%), Gaps = 23/286 (8%)

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S ++  L K      A+ ++ Q+  + CKP    Y+++I  L + G  ++  EI  EM N
Sbjct: 167 SEIVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCN 226

Query: 431 NG-CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +G C  +  TYS+L+  F + G    A+ ++ +M +N        Y+ L+    +  K+ 
Sbjct: 227 DGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVE 286

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  V  +M  +GC   V  Y+  I GL  AG V++A ++F +M+  +   +PDV   N 
Sbjct: 287 KALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMI--KDGCKPDVVLINS 344

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+N L K   +  ++ L   M    C P++VT N  + AL E  +AP          A  
Sbjct: 345 LINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFE-CKAPASE-------AAS 396

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            F++ +  G            ++P + T+  ++   C+  RI+ A+
Sbjct: 397 WFEKMKGCG------------IAPSSFTYSILIDGFCKTNRIEKAL 430


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  217 bits (553), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 138/445 (31%), Positives = 220/445 (49%), Gaps = 7/445 (1%)

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
           F C     S+N ++N +  +G + RA E    I     + +  +  T+N +I+  C+  +
Sbjct: 236 FGCDPNDVSYNVLVNGLSGKGEFDRAKEL---IEQMSMLGLKVSAHTYNPLIRGFCKKEM 292

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
            + A  L REM  R   P + TY T+M  LC+  R+ +A   LD M  +   P  V++N 
Sbjct: 293 FEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNT 352

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI G  + G    A  L   +  K  +P+ VTYNTLI G C  GNLD A  + D M+   
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+ VT+  ++ G  ++G       +   M  R    +   Y+T I G  K G    A 
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
            + ++M  +G  P+ + Y+ LI+GLC++G  D+A E++ +M   G   +  TY+S++   
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAH 532

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
             SG   KA E++ DM K     + V Y+VLIH     G+L  A+  + +M  +G  P+V
Sbjct: 533 LISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNV 592

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDL 566
           + Y+++I+GLC    ++ A  LF EM   E K   P+ +TY IL+N          ++ L
Sbjct: 593 ITYNALIYGLCKENMMDVAYNLFAEM---ESKGVSPNKYTYTILINENSNLQYWQDALKL 649

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKE 591
              M+DR   PD  T +  +  L +
Sbjct: 650 YKDMLDREIKPDSCTHSALMKHLSK 674



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 138/472 (29%), Positives = 233/472 (49%), Gaps = 40/472 (8%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +VK  + ++ V  ++ +  + L  +  +VN     +LP+    N V+K +    +V+   
Sbjct: 136 SVKLLDLLIQVFAKKLILEKCLMVFYKMVNN---GLLPDVRNCNRVLKLLKDKSMVNEVE 192

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +++  M      P I T+ T+MD  CKE  +  AV +LD M++ GC P  V++NVL+NGL
Sbjct: 193 EVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGL 252

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
              GE  RA +L++ M + G   +  TYN LI G C K   ++A  L   M+    +P  
Sbjct: 253 SGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTV 312

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY TI+  L +LGR  D  R L  M       +   Y+TLI G  + G   +A+ L+ +
Sbjct: 313 VTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSE 372

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           +  K   P+ V Y+ LIDG CR G  D A+ +  +MI +G   +  T++ L++GF + G 
Sbjct: 373 LRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGN 432

Query: 453 GHKAVEIWKDM----AKNNCVY-------------------------------NEVCYSV 477
              A E++ +M     K +C+                                + + Y+V
Sbjct: 433 LPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNV 492

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI+GLC+ G   +A  +  +M   G  PD V Y+S+IH    +G + +A ++F++M  L+
Sbjct: 493 LINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDM--LK 550

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
               P V TY +L+++   +  +  +    + M D+G  P+++T N  +  L
Sbjct: 551 KGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGL 602



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 217/487 (44%), Gaps = 55/487 (11%)

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           RN E  +     L+    K+  L++ +++  +M  +G  P     N ++  L     +  
Sbjct: 131 RNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNE 190

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
             ++   M      P  VT+NT++   C +G + +AV +LD M    C PN+V+Y  ++N
Sbjct: 191 VEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVN 250

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           GL   G       ++  M      V+ + Y+ LI G  K+   E+A  L ++M+ +G  P
Sbjct: 251 GLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALP 310

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
             V Y+ ++  LCR+G+  +A   L  M+N     +  +Y++L+ G+   G   +A+ ++
Sbjct: 311 TVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLF 370

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
            ++   N V + V Y+ LI G C  G L  A+ +   M+  G  PDVV ++ ++ G C  
Sbjct: 371 SELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQM 430

Query: 521 GSVEEALKLFNEML-------CL-----------------------EPKSQ---PDVFTY 547
           G++  A +LF+EML       C+                       E K++   PD+ TY
Sbjct: 431 GNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITY 490

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA------LKEKLEAPQDG-- 599
           N+L+N LCK  N   + +L+  M   G  PD VT    + A      L++  E   D   
Sbjct: 491 NVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLK 550

Query: 600 ----------TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                     T  ++  A+    R R     K  + M  K +SP   T+  ++  LC+  
Sbjct: 551 KGIHPSVVTYTVLIHSYAV----RGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKEN 606

Query: 650 RIQAAIN 656
            +  A N
Sbjct: 607 MMDVAYN 613



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 102/200 (51%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+N++I  +C+LG  D+A +L ++M +    PD  TY +++        L +A  +
Sbjct: 485 PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEV 544

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             +M   G  P+ VT+ VLI+     G L  A K  D M  KG  PN +TYN LI+GLC 
Sbjct: 545 FSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCK 604

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +  +D A +L   M +    PN+ TY  +IN    L    D  ++   M +R+   +   
Sbjct: 605 ENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCT 664

Query: 370 YSTLISGLFKEGKAEDAMKL 389
           +S L+  L K+ K    ++L
Sbjct: 665 HSALMKHLSKDYKLLAVLRL 684



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/194 (22%), Positives = 89/194 (45%), Gaps = 4/194 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI      G+F     ++ +MR E  V    ++  I  A+  + L+ +A  +F  M
Sbjct: 489 TYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDM 548

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +     +V ++  +++     G    A ++++ + +     + PN +T+N +I  +C+
Sbjct: 549 LKK-GIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDK---GVSPNVITYNALIYGLCK 604

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
             ++D A  LF EM  +   P+ YTY  L++         +A+ L  +M      P   T
Sbjct: 605 ENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCT 664

Query: 265 FNVLINGLCKNGEL 278
            + L+  L K+ +L
Sbjct: 665 HSALMKHLSKDYKL 678


>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
 gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
          Length = 447

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 221/424 (52%), Gaps = 12/424 (2%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +L + +    +    EFY H +   +     N +++ ++++  C+ G    A++L  EM 
Sbjct: 1   MLQIFVDSKRHRHGYEFYRHRLLGSYA---VNEVSYGILMQGFCKAGEFQQALELLDEMK 57

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                P++  + T++ GLC   ++ +A+L    +  D C P   T+++L++ LCK+G+  
Sbjct: 58  SNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGED-CAPNVYTYSILVDALCKSGQPH 116

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  LV  M  KGC PN VTYN LI G      LD+ + LL  M    C  + +TY  I+
Sbjct: 117 EAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMIL 176

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL-FKEG-KAEDAMKLWKQMMEKG 397
           +   K     +  R+L ++E+R    N   Y++L + L   EG +  +A+ L ++M+++G
Sbjct: 177 DIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEG 232

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            +PN V Y  ++  LC+  + DEA ++L  M + GC  +  +Y  L+  F  +G+ + ++
Sbjct: 233 TRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSL 292

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E+   M  +  + +    +V+IH  C+ G L EA  ++  M  RG  P  V Y+++I   
Sbjct: 293 ELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAF 352

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C A   + A+KL ++M  ++   +P+V TYN ++ + C++     +  +   M+D GC P
Sbjct: 353 CKAQQPDTAVKLLHQM--IQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFP 410

Query: 578 DLVT 581
           D V+
Sbjct: 411 DRVS 414



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 187/394 (47%), Gaps = 30/394 (7%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V++ +L+ G CK GE  +A +L+D M   G  PN V + T+I GLC  G + +A+ L  R
Sbjct: 31  VSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-LHFR 89

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
            +   C PN  TY  +++ L K G+  +   ++  M ++    N   Y+ LI G  K  +
Sbjct: 90  RIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++ + L K+M ++GC+ + + Y+ ++D  C+    DEA    + ++N     N  TY+S
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEA----YRLLNALEKRNVVTYNS 205

Query: 443 LMKGF--FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           L       E  +  +A+ + + M +     N+V Y  ++  LC++ +L EA  V   M S
Sbjct: 206 LFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYS 265

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           +GCK D V+Y  ++    +AG   ++L+L   ML        D  T N++++  CK  ++
Sbjct: 266 QGCKTDDVSYKILVVAFASAGRTYDSLELLGRML--GSGYILDTKTMNVVIHKFCKAGDL 323

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  L  SM  RG  P  VT N  + A                       K Q+     
Sbjct: 324 HEAHQLFKSMCQRGSIPSNVTYNTLIGAF---------------------CKAQQPDTAV 362

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           K++  M+Q    P   T+  +++  CR +R + A
Sbjct: 363 KLLHQMIQADFKPNVITYNSIIKSFCREQREEEA 396



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 197/401 (49%), Gaps = 11/401 (2%)

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
            V E S+  + + + KA   ++A+ L   M      +  V    +++  +   G   +AL
Sbjct: 27  AVNEVSYGILMQGFCKAGEFQQALELLDEMKSN-GVRPNVVIHTTIIRGLCTAGKVSQAL 85

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
             +  I      +  PN  T+++++  +C+ G    A  L  EM  + C P++ TY  L+
Sbjct: 86  LHFRRIGE----DCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALI 141

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           DG  K  RLDE ++LL EM   GC    +T+ ++++  CKN  +  A +L++ +  +   
Sbjct: 142 DGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR--- 198

Query: 295 PNEVTYNTLIHGLCLK--GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            N VTYN+L   L         +A+SLL++M+     PN+V Y T++  L K  R  +  
Sbjct: 199 -NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAY 257

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           +VL+SM  +    ++  Y  L+      G+  D+++L  +M+  G   +T   + +I   
Sbjct: 258 QVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKF 317

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G   EA ++   M   G   +  TY++L+  F ++ +   AV++   M + +   N 
Sbjct: 318 CKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNV 377

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           + Y+ +I   C + +  EAR ++  M+  GC PD V+Y+++
Sbjct: 378 ITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 195/408 (47%), Gaps = 17/408 (4%)

Query: 76  LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAH 132
           LGSY + + ++  L+Q +  +G+F+    +L  M+       VV+  + I      GK  
Sbjct: 23  LGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGK-- 80

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
            V +A+  F  + ++  C   V +++ +++ + + G  H A      +V        PN 
Sbjct: 81  -VSQALLHFRRIGED--CAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKK---GCSPNV 134

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T+N +I    +L  +D  + L +EM  R C  D+ TY  ++D  CK N +DEA  LL+ 
Sbjct: 135 VTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNA 194

Query: 253 MQVDGCFPTPVTFNVLINGL--CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           ++        VT+N L   L   +      A  L++ M  +G  PN+V Y T++  LC  
Sbjct: 195 LEKRNV----VTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKN 250

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             LD+A  +L  M +  C  ++V+Y  ++      GR  D   +L  M    + ++    
Sbjct: 251 SRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTM 310

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + +I    K G   +A +L+K M ++G  P+ V Y+ LI   C+  +PD A ++L +MI 
Sbjct: 311 NVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQ 370

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
                N  TY+S++K F    +  +A  I++ M  + C  + V Y+ L
Sbjct: 371 ADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDSGCFPDRVSYTTL 418



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 9/261 (3%)

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           NEV+YG ++ G  K G       +L  M+      N  I++T+I GL   GK   A+  +
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           +++ E  C PN   YS L+D LC+ G+P EA  ++ EM+  GC+ N  TY++L+ GF + 
Sbjct: 89  RRIGED-CAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            +  + + + K+M++  C  + + Y++++   C++  + EA  +   +  R    +VV Y
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTY 203

Query: 511 SSMIHGLCNA--GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +S+   L  A      EAL L  +M+  +  ++P+   Y  +L  LCK S +  +  +L 
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMI--QEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLL 261

Query: 569 SMMDRGCDPDLVTCNIFLTAL 589
           SM  +GC  D V+  I + A 
Sbjct: 262 SMYSQGCKTDDVSYKILVVAF 282



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 17/234 (7%)

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A N  +Y  LM+GF ++G+  +A+E+  +M  N    N V ++ +I GLC  GK+ +A +
Sbjct: 27  AVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQA-L 85

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  + +   C P+V  YS ++  LC +G   EA  L  EM+  +    P+V TYN L++ 
Sbjct: 86  LHFRRIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMV--KKGCSPNVVTYNALIDG 143

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL------- 606
             K   +   + LL  M  RGC  D++T  + L     K  +  +    LN L       
Sbjct: 144 FRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFC-KNNSIDEAYRLLNALEKRNVVT 202

Query: 607 ------AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                 A+   +  RT+    ++E M+Q+   P    +  V+  LC+  R+  A
Sbjct: 203 YNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEA 256



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 4/167 (2%)

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           +++ F +S +     E ++     +   NEV Y +L+ G C+ G+ ++A  +  +M S G
Sbjct: 1   MLQIFVDSKRHRHGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNG 60

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            +P+VV ++++I GLC AG V +AL  F     +     P+V+TY+IL++ALCK      
Sbjct: 61  VRPNVVIHTTIIRGLCTAGKVSQALLHFRR---IGEDCAPNVYTYSILVDALCKSGQPHE 117

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +  L+  M+ +GC P++VT N  +   + KLE   +    L E++ R
Sbjct: 118 AYGLVTEMVKKGCSPNVVTYNALIDGFR-KLERLDEVLMLLKEMSQR 163


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 184/326 (56%), Gaps = 4/326 (1%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P  +T+N +I  +C+      A  L  EM    C PDI+TY TL+ G CK  + D+A+ 
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGL 307
           + +++   G  P  VT++ LI+GLCK G L  A  L   M   G C+PN VTYN+LI G 
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G +D+A++LL+RM  +   P+ VTY T++NG  KL R  D   +L  M  +    N 
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             +++L+ GL +E +  DA+ +  +M  K C P    Y+ ++DG CRV + +EA + + E
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
            ++  C  N  +++ +++G  +  +  +A+E+ ++  +  C  + V Y+ +I  LC + K
Sbjct: 291 EMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348

Query: 488 LREARMVWTQMLSR-GCKPDVVAYSS 512
           + EA  V+ +ML   GC P+ + YS+
Sbjct: 349 VDEACRVYRKMLEEPGCLPNSITYST 374



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/327 (35%), Positives = 183/327 (55%), Gaps = 4/327 (1%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P   TY +L+ GLCK  R  EA  LL+EM   GC P   T+  LI G CK+ +   A ++
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS-KCMPNEVTYGTIINGLV 343
            + +  +G  P+ VTY+ LI GLC +G L +A+ L  RM+ S  CMPN VTY ++I+G  
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           ++G+  +   +L  M E     +   Y+TL++G  K  + +DA  L  QM  KG  PN V
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            +++L+DGLCR  +  +A  IL EM    C+   +TY++++ G+    +  +A +    +
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--L 289

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            + +C  N V ++++I GLC+  +  EA  +  +   R C PDVV Y+++I  LC    V
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNIL 550
           +EA +++ +ML  EP   P+  TY+  
Sbjct: 350 DEACRVYRKML-EEPGCLPNSITYSTF 375



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 105/289 (36%), Positives = 164/289 (56%), Gaps = 7/289 (2%)

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           +P  VTYN+LI GLC      +A  LL+ MV S C+P+  TY T+I G  K  ++ D  R
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-CKPNTVVYSALIDGL 412
           V   +  R F  +   YS LI GL KEG+ ++A+ L+ +M++ G C PNTV Y++LI G 
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           CR+GK DEA  +L  M   G + +  TY++LM GF +  +   A ++   M +     N 
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK-LFN 531
           V ++ L+ GLC + +L +A  +  +M  + C P V  Y++++ G C    +EEA K +  
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLE 290

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           EM C      P+V ++NI++  LCK +  S +++L+     R C+PD+V
Sbjct: 291 EMDC-----PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVV 334



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/328 (30%), Positives = 172/328 (52%), Gaps = 7/328 (2%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T  ++NS+++ + +     RA E Y+ +    +   +P+  T+  +I   C+    D+A+
Sbjct: 53  TAVTYNSLISGLCKA---ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDAL 109

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPVTFNVLING 271
           ++F ++  R   PD+ TY  L+DGLCKE RL EA+ L   M   G C P  VT+N LI+G
Sbjct: 110 RVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISG 169

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            C+ G++  A  L++ M   G  P+ VTY TL++G C    LD A  LL++M      PN
Sbjct: 170 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPN 229

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VT+ ++++GL +  R  D   +L  M  +      Y Y+T++ G  +  + E+A K   
Sbjct: 230 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFML 289

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           + M+  C PN V ++ +I GLC+V +  EA E++ E     C  +   Y++++       
Sbjct: 290 EEMD--CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREK 347

Query: 452 KGHKAVEIWKDMAKN-NCVYNEVCYSVL 478
           K  +A  +++ M +   C+ N + YS  
Sbjct: 348 KVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 173/327 (52%), Gaps = 26/327 (7%)

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
           +P  VTY ++I+GL K  RA +   +L  M       + + Y+TLI+G  K  K++DA++
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGF 447
           +++Q++ +G +P+ V YS LIDGLC+ G+  EA ++   MI +G C  N  TY+SL+ GF
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
              GK  +A+ + + MA+     + V Y+ L++G C+  +L +A  +  QM  +G  P+V
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V ++S++ GLC    + +A+ +  EM        P V+TYN +L+  C+ + +  +   +
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMR--RKSCSPTVYTYNTILDGYCRVNQLEEARKFM 288

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVML 627
              MD  C P++V+ NI +  L                      K  R+S   ++VE   
Sbjct: 289 LEEMD--CPPNVVSFNIMIRGL---------------------CKVNRSSEAMELVEEAR 325

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAA 654
           ++  +P    +  V+  LCR K++  A
Sbjct: 326 RRRCNPDVVMYTTVIDVLCREKKVDEA 352



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 164/291 (56%), Gaps = 8/291 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +   + K+   ++A+R+F  +V     +  V +++ +++ + +EG    A++ +  
Sbjct: 91  TYTTLITGFCKSKKSDDALRVFEQLVARGF-RPDVVTYSCLIDGLCKEGRLKEAIDLFGR 149

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++  K  + +PNT+T+N +I   CR+G +D A+ L   M      PD+ TY TLM+G CK
Sbjct: 150 MI--KSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCK 207

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             RLD+A  LL++M   G  P  VTF  L++GLC+   L  A  ++  M  K C P   T
Sbjct: 208 LARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYT 267

Query: 300 YNTLIHGLCLKGNLDKAVS-LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           YNT++ G C    L++A   +L+ M    C PN V++  +I GL K+ R+ +   ++   
Sbjct: 268 YNTILDGYCRVNQLEEARKFMLEEM---DCPPNVVSFNIMIRGLCKVNRSSEAMELVEEA 324

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTVVYSAL 408
             R+ + +  +Y+T+I  L +E K ++A +++++M+E+ GC PN++ YS  
Sbjct: 325 RRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 22/221 (9%)

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
            A TY+SL+ G  ++ +  +A ++ ++M  + C+ +   Y+ LI G C+  K  +A  V+
Sbjct: 53  TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 112

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            Q+++RG +PDVV YS +I GLC  G ++EA+ LF  M+       P+  TYN L++  C
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMI-KSGSCMPNTVTYNSLISGFC 171

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           +   +  +++LL  M + G  PD+VT    +     KL    D  D LN+          
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFC-KLARLDDAYDLLNQ---------- 220

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                     M +K L+P   T+  ++  LCR  R+  A++
Sbjct: 221 ----------MTRKGLTPNVVTFTSLMDGLCRENRLSDAVH 251


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 210/399 (52%), Gaps = 2/399 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  ++N+VI  + + G   +A++LF EMP +   P+  TY T++DG  K+  L+    L
Sbjct: 186 PNAFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRL 245

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             +M   G  P  +T+NVL++GLC+ G +G  A ++D M  +  +P+  TY+ L  G   
Sbjct: 246 WSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSR 305

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+    +SL +  V         T   ++NGL K G+      VL ++          I
Sbjct: 306 TGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVI 365

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  + G  E A  +++QM  +  +P+ + Y+ALI+GL +V +  EA +++ EM 
Sbjct: 366 YNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEME 425

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            NG   +  T+++L+  +  +G+  K   I  DM +     N V Y  +++  C++GK+ 
Sbjct: 426 KNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  +   M  +   P    Y+++I      GS ++A  L  +M        P + TYN+
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKM--KSSGVPPSIVTYNL 543

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           L+  LCKQS IS + +LL+S+ + G  PD+++ N  ++A
Sbjct: 544 LIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISA 582



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/500 (26%), Positives = 247/500 (49%), Gaps = 11/500 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
           T+   +Q    +GD      +L RM  +        S+  +     KA    +A++LF  
Sbjct: 154 TWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDE 213

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M ++      + ++N++++  I++G        ++ ++  +H  + PN +T+N+++  +C
Sbjct: 214 MPEKAVVPNHI-TYNTMIDGHIKKGDLESGFRLWSQML--RH-GLKPNVITYNVLLSGLC 269

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R G +     +  EM  R   PD +TY  L DG  +       + L +E    G      
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T ++L+NGLCK+G++ +A +++  +   G L   V YNTLI+G C  G+L+ A S+  +M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            +    P+ +TY  +INGL K+ R  +   +++ ME+   + +   ++TLI    + G+ 
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQL 449

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E    +   M EKG KPN V Y ++++  C+ GK  EA  IL +M        A  Y+++
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +  + E G   +A  + + M  +    + V Y++LI GLC+  ++ EA  +   + + G 
Sbjct: 510 IDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGL 569

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PDV++Y+++I   C   + + AL+L  EM     K  P   TY +L ++L     +   
Sbjct: 570 APDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPR--TYRMLFSSLGGAGRVHEM 627

Query: 564 IDLLNSMMDRGCDPDLVTCN 583
            +L   M+D+    D+V C+
Sbjct: 628 ENLYQQMLDK----DVVPCS 643



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 172/365 (47%), Gaps = 30/365 (8%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC-MPNEVTYGTIINGLVKLGRAVDGAR 353
           P+  T+N  +    + G+LD+AV +L RM       PN  +Y  +I GL K G   D  +
Sbjct: 150 PDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVK 209

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +   M E+    N   Y+T+I G  K+G  E   +LW QM+  G KPN + Y+ L+ GLC
Sbjct: 210 LFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLC 269

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           R G+  E   +L EM +     + FTYS L  G   +G     + ++++  K        
Sbjct: 270 RAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY 329

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             S+L++GLC+DGK+ +A  V   +++ G     V Y+++I+G C  G +E A  +F +M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 534 LCLEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
                KS+   PD  TYN L+N L K   I+ + DL+  M   G +P + T N  + A  
Sbjct: 390 -----KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYG 444

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                                +  +    F I+  M +K L P   ++  +V   C+  +
Sbjct: 445 ---------------------RAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGK 483

Query: 651 IQAAI 655
           I  A+
Sbjct: 484 ILEAV 488



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 200/449 (44%), Gaps = 39/449 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L+     +G       VL  M   K V    ++  +F  + +    +  + LF   
Sbjct: 260 TYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEES 319

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V +   K    + + +LN + ++G   +A E    +VN+    +L  T+ +N +I   C+
Sbjct: 320 VKK-GVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNS---GLLQTTVIYNTLINGYCQ 375

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G ++ A  +F++M  R   PD  TY  L++GL K  R+ EA  L+ EM+ +G  P+  T
Sbjct: 376 IGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVET 435

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI+   + G+L +   ++ +M  KG  PN V+Y ++++  C  G + +AV++LD M 
Sbjct: 436 FNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMF 495

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
               +P    Y  II+  ++                                    G  +
Sbjct: 496 IKDVLPGAQVYNAIIDAYIEC-----------------------------------GSTD 520

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A  L ++M   G  P+ V Y+ LI GLC+  +  EAEE+L  + N G A +  +Y++L+
Sbjct: 521 QAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLI 580

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
                     +A+E+ K+M K     +   Y +L   L   G++ E   ++ QML +   
Sbjct: 581 SACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVV 640

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           P    Y+ M+      G   +   L  EM
Sbjct: 641 PCSGIYNIMVDAYAKCGEESKVEALRKEM 669



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 133/289 (46%), Gaps = 17/289 (5%)

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA-NAFT 439
           G+  D    ++ ++    +P+T  ++  +      G  DEA  +L  M  +G  A NAF+
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ ++ G +++G    AV+++ +M +   V N + Y+ +I G  + G L     +W+QML
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G KP+V+ Y+ ++ GLC AG + E   + +EM     K  PD FTY+IL +   +  +
Sbjct: 251 RHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEM--ASRKMVPDGFTYSILFDGHSRTGD 308

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQDG-----TDFLNE 605
               + L    + +G      TC+I L  L         +E L+   +      T   N 
Sbjct: 309 SQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNT 368

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           L     +     G F I + M  + + P   T+  ++  L + +RI  A
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEA 417



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 4/254 (1%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           ++F  +  AYG+A  +E+   +   M  E   K  V S+ S++N   + G    A+   +
Sbjct: 434 ETFNTLIDAYGRAGQLEKCFIILSDM-QEKGLKPNVVSYGSIVNAFCKNGKILEAVAILD 492

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            +      ++LP    +N +I      G  D A  L  +M      P I TY  L+ GLC
Sbjct: 493 DMFIK---DVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLC 549

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K++++ EA  LLD ++  G  P  +++N LI+  C      RA +L   M+  G  P+  
Sbjct: 550 KQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPR 609

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY  L   L   G + +  +L  +M+    +P    Y  +++   K G       +   M
Sbjct: 610 TYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEALRKEM 669

Query: 359 EERKFHVNEYIYST 372
            ++   V +Y   T
Sbjct: 670 SDKGIAVGDYTSMT 683


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 220/445 (49%), Gaps = 43/445 (9%)

Query: 183  AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            A H  + P+    N V++ +      D+   +  EM     EP I TY TL+D   KE R
Sbjct: 1076 ASH-GVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGR 1134

Query: 243  LDEAVLLLDEMQV--DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             D+  +LL EM+    GC P  VT+NV+I GL + G+L  AA+LV+ M L     +  TY
Sbjct: 1135 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFTY 1193

Query: 301  NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSME 359
            N LI GL  +G + K   L   M     MP  VTY  +I+GL++ G  V+ A+V    M 
Sbjct: 1194 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSG-LVEAAQVKFAEMR 1252

Query: 360  ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                  +   Y++L++G  K G  ++A+ L+  +   G  P  + Y+ LIDG CR+G  +
Sbjct: 1253 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLE 1312

Query: 420  EAEEILFEMINNGCAANAFTYSSLMKG------------FFES----------------- 450
            EA  +  EM   GC  N  TY+ LMKG            FF+                  
Sbjct: 1313 EARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRI 1372

Query: 451  ------GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
                  G   +A E+ + +       + V Y++LIHGLC+ G L++A+ +  +M+S G +
Sbjct: 1373 CAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQ 1432

Query: 505  PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            PD + Y+ +IH  C  G + EA K+FN M  +     P   T+ ++++A C++ N+  + 
Sbjct: 1433 PDCITYTCLIHAHCERGLLREARKIFNNM--ISDGLLPSAVTFTVIIHAYCRRGNLYSAY 1490

Query: 565  DLLNSMMDRGCDPDLVTCNIFLTAL 589
                 M++ G +P+ +T N+ + AL
Sbjct: 1491 GWFRKMLEEGVEPNEITYNVLIHAL 1515



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 211/432 (48%), Gaps = 8/432 (1%)

Query: 156  SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
            ++N V+  + ++G    A E    +V    ++   ++ T+N +I  +   G V     L 
Sbjct: 1158 TYNVVITGLTRKGDLEEAAE----LVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQ 1213

Query: 216  REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             EM      P + TY  ++ GL +   ++ A +   EM+  G  P  +T+N L+NG CK 
Sbjct: 1214 LEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKA 1273

Query: 276  GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
            G L  A  L  ++   G  P  +TYN LI G C  G+L++A  L + M    C+PN  TY
Sbjct: 1274 GNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTY 1333

Query: 336  GTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
              ++ G + + R++  AR     M  +    + + Y+T I      G    A +L + +M
Sbjct: 1334 TILMKGSLNV-RSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLM 1392

Query: 395  EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
             +G   +TV Y+ LI GLC+ G   +A+E+  +M++NG   +  TY+ L+    E G   
Sbjct: 1393 LEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLR 1452

Query: 455  KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            +A +I+ +M  +  + + V ++V+IH  C  G L  A   + +ML  G +P+ + Y+ +I
Sbjct: 1453 EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLI 1512

Query: 515  HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            H LC  G  + A   F+EM  LE     + +TY +L++  CK  N   ++     M   G
Sbjct: 1513 HALCRMGRTQLASHHFHEM--LERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNG 1570

Query: 575  CDPDLVTCNIFL 586
              PD +T    L
Sbjct: 1571 IHPDYLTHKALL 1582



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 182/385 (47%), Gaps = 5/385 (1%)

Query: 153  TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
            TV ++N++++ ++Q GL   A   +  +   + M +LP+ +T+N ++   C+ G +  A+
Sbjct: 1224 TVVTYNAMIHGLLQSGLVEAAQVKFAEM---RAMGLLPDVITYNSLLNGYCKAGNLKEAL 1280

Query: 213  QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
             LF ++      P + TY  L+DG C+   L+EA +L +EM   GC P   T+ +L+ G 
Sbjct: 1281 LLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGS 1340

Query: 273  CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
                 L  A +  D M  KG  P+   YNT I    + G++ +A  L + ++      + 
Sbjct: 1341 LNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDT 1400

Query: 333  VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            VTY  +I+GL K G   D   + M M       +   Y+ LI    + G   +A K++  
Sbjct: 1401 VTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNN 1460

Query: 393  MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
            M+  G  P+ V ++ +I   CR G    A     +M+  G   N  TY+ L+      G+
Sbjct: 1461 MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGR 1520

Query: 453  GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
               A   + +M +   V N+  Y++LI G C+ G   +A   + +M   G  PD + + +
Sbjct: 1521 TQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKA 1580

Query: 513  MIHGLCNAGSVEEALKLFNEMLCLE 537
            ++ G    G V   ++  + ++  E
Sbjct: 1581 LLKGF--DGHVHHTIEYLDNVILGE 1603


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/469 (28%), Positives = 219/469 (46%), Gaps = 42/469 (8%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N+  N  ++  +IK +C+ G VD   ++  E+     +P + TY  LMD LCK  R++EA
Sbjct: 6   NVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEA 65

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L   M+  G  P+ VTF +LINGL +    G    ++  M   G  PNEV YN LI  
Sbjct: 66  FRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGW 125

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C KG+  +A+ L D MV  K  P  VTY  I   L K G      R+L  M      V+
Sbjct: 126 HCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVH 185

Query: 367 EYIYSTLISGLFKEGKA-EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
             +++T+++ L +  +  E  + +  +M+ +G +PN  + +A +  LC+ GK  EA  I 
Sbjct: 186 CGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIW 245

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
           F+ +N G           MK         +A ++ + M       + + Y+++I G C+D
Sbjct: 246 FKTLNKG---------KYMK---------EATKVIQTMLNKGIELDSITYNIMIRGCCKD 287

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            K+ EA  +   M  RG KPD+  +++++H  CN G +EE   L ++M       QPD+ 
Sbjct: 288 SKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKT--EGLQPDIV 345

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           +Y  +++  CK  +I  + + L  +MDRG  P     N+F+                 N 
Sbjct: 346 SYGTIIDGHCKAKDIRKAKEYLTELMDRGLKP-----NVFI----------------YNA 384

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           L     +    SG    VE M    + P   T+  ++  +C    ++ A
Sbjct: 385 LIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEA 433



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 136/533 (25%), Positives = 233/533 (43%), Gaps = 66/533 (12%)

Query: 81  LGDSTFYSLIQHYANSGDFKS-LEMV--LYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
           L + ++ ++I+    +G   +  EM+  L+R   +  VV   ++  +  A  K+  VEEA
Sbjct: 9   LNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVV---TYNVLMDALCKSGRVEEA 65

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
            RL   M ++     +V +F  ++N + +     R  E    +   + + + PN + +N 
Sbjct: 66  FRLKGRM-EQGGMTPSVVTFGILINGLARG---ERFGEVGIVLQEMEQLGVSPNEVIYNE 121

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN---------------- 241
           +I   CR G    A++LF EM ++  +P   TY  +   LCKE                 
Sbjct: 122 LIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIG 181

Query: 242 --------------------RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE---- 277
                               RL+  V + +EM   G  P        +  LCK G+    
Sbjct: 182 MTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEA 241

Query: 278 -------------LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
                        +  A K++  M  KG   + +TYN +I G C    +++A+ L   M 
Sbjct: 242 VGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMT 301

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P+  T+ T+++    LG+  +   +L  M+      +   Y T+I G  K     
Sbjct: 302 RRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIR 361

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A +   ++M++G KPN  +Y+ALI G  R G    A + +  M +NG      TY SLM
Sbjct: 362 KAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLM 421

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
                +G   +A  I+    +NN     + Y+++I G C+ GK+ EA   + +M SRG  
Sbjct: 422 YWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGIS 481

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           P+ + Y+++++    +G+ EEA KLF+EM  +     PD  TY  L+ A C +
Sbjct: 482 PNKLTYTTLMYAYSKSGNSEEASKLFDEM--VGSGVIPDNITYGTLI-ARCSE 531



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 138/261 (52%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +++T+N++I+  C+   ++ AI+L  +M  R  +PD++T+ TL+   C   +++E   LL
Sbjct: 273 DSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLL 332

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+M+ +G  P  V++  +I+G CK  ++ +A + +  +  +G  PN   YN LI G    
Sbjct: 333 DQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRN 392

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G++  A+  ++ M ++   P  VTYG+++  +   G   +   +     E    +    Y
Sbjct: 393 GDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGY 452

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + +I G  K GK  +A+  +++M  +G  PN + Y+ L+    + G  +EA ++  EM+ 
Sbjct: 453 TIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVG 512

Query: 431 NGCAANAFTYSSLMKGFFESG 451
           +G   +  TY +L+    E G
Sbjct: 513 SGVIPDNITYGTLIARCSEKG 533



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 176/405 (43%), Gaps = 33/405 (8%)

Query: 103 EMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVD---EFHCKRTVKSFNS 159
           EMVL +M+         ++  I KA  K   +E A R+   M+      HC      FN+
Sbjct: 141 EMVLKKMKPTA-----VTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGL----FNT 191

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAK-HMNILPNTLTFNLVIKTVCRLG------------ 206
           V+  ++Q     R LE    I N      + PN       ++ +C+ G            
Sbjct: 192 VVAWLLQR---TRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKT 248

Query: 207 -----LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
                 +  A ++ + M  +  E D  TY  ++ G CK+++++EA+ L  +M   G  P 
Sbjct: 249 LNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPD 308

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             TFN L++  C  G++     L+D M  +G  P+ V+Y T+I G C   ++ KA   L 
Sbjct: 309 LFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLT 368

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            ++     PN   Y  +I G  + G        + +M+          Y +L+  +   G
Sbjct: 369 ELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAG 428

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             E+A  ++ Q  E       + Y+ +I G C++GK  EA     EM + G + N  TY+
Sbjct: 429 LVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYT 488

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           +LM  + +SG   +A +++ +M  +  + + + Y  LI    E G
Sbjct: 489 TLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKG 533



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 69/297 (23%), Positives = 135/297 (45%), Gaps = 5/297 (1%)

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E R   +NEY Y+ +I  L K GK +   ++  ++   G +P  V Y+ L+D LC+ G+ 
Sbjct: 3   ESRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRV 62

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           +EA  +   M   G   +  T+  L+ G     +  +   + ++M +     NEV Y+ L
Sbjct: 63  EEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNEL 122

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I   C  G   +A  ++ +M+ +  KP  V Y+ +   LC  G +E A ++  +ML +  
Sbjct: 123 IGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGM 182

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
                +F   ++   L +   +   + + N M+ RG  P+    +  +TA   +L     
Sbjct: 183 TVHCGLFN-TVVAWLLQRTRRLESVVSITNEMVTRGMRPN----DPLMTACMRELCKGGK 237

Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             + +      L K +      K+++ ML K +   + T+  +++  C+  +++ AI
Sbjct: 238 HQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAI 294


>gi|449523852|ref|XP_004168937.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Cucumis sativus]
          Length = 683

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 142/481 (29%), Positives = 241/481 (50%), Gaps = 17/481 (3%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I P+ +TF  ++  +C+ G +     L REM       +  +Y  L+D L K  ++ EA+
Sbjct: 6   IFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEAL 65

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           + L  M V G     +   VLI+GL K+G++  A  L  N++    +PN +TY+ LI   
Sbjct: 66  MTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSR 125

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G+++ A S L  M    C+PN +TY ++ING VK G   D  +VL  M  +    N 
Sbjct: 126 CKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNI 185

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ L+ G FK G  + A+ L+ +M + G K N  +  A ++ + R G+ +EAEE++ +
Sbjct: 186 CTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAK 245

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M + G   +   Y++LM GF +SGK   A+ + ++M   N V++ V ++VLI+ L + GK
Sbjct: 246 MASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK 305

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
             +   +++ M   G  PD+  Y++M++G    G+   AL+L+NEM     K  P+  T 
Sbjct: 306 -SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEM--KSRKLIPNAITC 362

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP----------- 596
           NI++N LC+   + ++ID+L  M+  G  P   T  I L    +   A            
Sbjct: 363 NIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVN 422

Query: 597 ---QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
              +   D  N L   L K   T     +++ M ++ +   T+T+  ++   C    ++ 
Sbjct: 423 MQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKR 482

Query: 654 A 654
           A
Sbjct: 483 A 483



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 247/534 (46%), Gaps = 46/534 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF S++      G     +++L  M +    +   S+  +  A  KA  V EA+     M
Sbjct: 12  TFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGKVAEALMTLACM 71

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRAL--EFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +   +      +F+ +   ++ +GL+      E      N   +N++PN +T++ +I + 
Sbjct: 72  IVRGN------NFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSALIDSR 125

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+LG ++ A     EM  ++C P++ TY +L++G  K+  L +A  +L +M      P  
Sbjct: 126 CKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKNAMPNI 185

Query: 263 VTFNVLING-----------------------------------LCKNGELGRAAKLVDN 287
            T+ +L++G                                   + ++G +  A +LV  
Sbjct: 186 CTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAEELVAK 245

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   G  P+ V Y  L+ G    G +  A++L   M +   + + VT+  +IN L KLG+
Sbjct: 246 MASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCLFKLGK 305

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           + D   +  +M E     +   Y+T+++G FK+G    A++LW +M  +   PN +  + 
Sbjct: 306 S-DTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAITCNI 364

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I+GLC  G+ + A +IL EM+  G    + TY  L+    +S +    ++  + +    
Sbjct: 365 MINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRADTILQTHELLVNMQ 424

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              ++  Y++LI  LC+ G  R+A  V   M  RG   D   Y+++IHG C +  ++ A 
Sbjct: 425 LKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALIHGYCISSHLKRAF 484

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
             ++ M  L  +  PD+ TYN+LL  L K   I  + DLL+ +  RG  P+  T
Sbjct: 485 MTYSTM--LSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLVPNACT 536



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 238/516 (46%), Gaps = 7/516 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI      GD    E  L+ M  +  V    ++  +   Y K  L+ +A ++   M
Sbjct: 117 TYSALIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKM 176

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V + +    + ++  +L+   + G    AL+ Y+ +   K   +  N    +  +  + R
Sbjct: 177 VHK-NAMPNICTYAILLDGSFKAGWQDIALDLYSKM---KQGGLKDNVFILDAFVNNMKR 232

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A +L  +M     +PD+  Y  LMDG  K  ++  A+ L  EM         VT
Sbjct: 233 SGRMEEAEELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVT 292

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FNVLIN L K G+      +   M   G  P+  TYNT+++G   KGN   A+ L + M 
Sbjct: 293 FNVLINCLFKLGK-SDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMK 351

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           + K +PN +T   +INGL + GR  +   +L  M     +     Y  L++   K  +A+
Sbjct: 352 SRKLIPNAITCNIMINGLCEAGRMENAIDILKEMVLMGLYPTSTTYRILLNISSKSRRAD 411

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
             ++  + ++    K +  VY+ LI  LC++G   +A  +L +M   G  A+  TY++L+
Sbjct: 412 TILQTHELLVNMQLKVDKDVYNILISNLCKLGMTRKATAVLKDMEERGIIADTTTYNALI 471

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+  S    +A   +  M       +   Y++L+ GL + G + EA  + +++  RG  
Sbjct: 472 HGYCISSHLKRAFMTYSTMLSERVSPDIETYNLLLGGLSKAGLIHEADDLLSEIKKRGLV 531

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P+   Y +++ G C   + +E L+++ EM+      +P    YN+L+    K   +  + 
Sbjct: 532 PNACTYETLMCGHCKVRNTKECLRIYCEMVIKGFIPKPR--AYNMLIGYFSKMGKMKQAK 589

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
           +L+N M  +G  P   T +I +      L+ P  G+
Sbjct: 590 ELMNEMQTKGVSPTCTTYDILICGWCNLLKMPDLGS 625



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 176/388 (45%), Gaps = 33/388 (8%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   G FP  VTF  ++ GLCK+G+L     L+  M   G   N V+Y  L+  L   G 
Sbjct: 1   MVGSGIFPDVVTFGSILYGLCKHGKLSEGKLLLREMGKMGMNLNNVSYTILLDALFKAGK 60

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           + +A+  L  M+      + +    +I+GL K G+  +   +  ++ +     N   YS 
Sbjct: 61  VAEALMTLACMIVRGNNFDVIACTVLIDGLFKSGQIKEAEYLFCNLYQLNLVPNYITYSA 120

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI    K G    A     +M EK C PN + YS+LI+G  + G   +A ++L +M++  
Sbjct: 121 LIDSRCKLGDINGAESALHEMEEKDCVPNVITYSSLINGYVKQGLLHDAFKVLRKMVHKN 180

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  TY+ L+ G F++G    A++++  M +     N       ++ +   G++ EA 
Sbjct: 181 AMPNICTYAILLDGSFKAGWQDIALDLYSKMKQGGLKDNVFILDAFVNNMKRSGRMEEAE 240

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML----------------CL 536
            +  +M S G KPD+V Y++++ G   +G V  AL L  EM                 CL
Sbjct: 241 ELVAKMASGGLKPDLVNYTNLMDGFLKSGKVSSALNLAQEMTSKNVVFDIVTFNVLINCL 300

Query: 537 ----------------EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
                           E    PD+ TYN +LN   K+ N + +++L N M  R   P+ +
Sbjct: 301 FKLGKSDTESIYSAMREMGLSPDLATYNTMLNGNFKKGNWTSALELWNEMKSRKLIPNAI 360

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAI 608
           TCNI +  L E     ++  D L E+ +
Sbjct: 361 TCNIMINGLCEAGRM-ENAIDILKEMVL 387


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 254/522 (48%), Gaps = 9/522 (1%)

Query: 67  DEIFNSTPKLGSYQLGDSTFY--SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           D+ F     LG   +  + F   +LI        F+  E +   M        E ++  +
Sbjct: 317 DKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAIL 376

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             +  K  ++++A+ +F  M  E   + TV  +NS++N   Q   +H+A    N +V   
Sbjct: 377 IHSLCKRGMMDDALCMFDRM-REKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEK- 434

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              + P+  +++ +I  +CR G + +A++L REM       ++YT+ TL+ G CK+  +D
Sbjct: 435 --GLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMD 492

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  L D+M      P  VTFNV+I G C+ G + +A +L D M  +G  P+  TY +LI
Sbjct: 493 EAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
             LCL     KA   +D +  +  + N  +  T++ G  K GR  +   +   M  R   
Sbjct: 553 SVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVK 612

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           ++   ++ ++    K    E    L+++M EKG KP+ V ++ +ID   +     +A   
Sbjct: 613 LDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNC 672

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             +MI +GC+ N  TY+ L+    +SG    A  + ++M     + N   Y+  +  L  
Sbjct: 673 WDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLAN 732

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
           +G+L +A+++   +L  GC  + V ++++I G C AG ++ A+ L       E    PD 
Sbjct: 733 EGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNT--ESGFFPDC 789

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            +Y+ ++N LCK  +I+ +  L N M+ +G  PD+V  NI +
Sbjct: 790 ISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI 831



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 151/598 (25%), Positives = 278/598 (46%), Gaps = 23/598 (3%)

Query: 79  YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG--KAHLVEE 136
           + L +  + + I+ Y    +      +L RM  E + V   +  +    YG  + + V E
Sbjct: 191 FPLDEYVYTAGIRAYCEIRNLDGARGLLTRM--ESKGVKGSAVPYNVLMYGLCRNNRVLE 248

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+ + ++MV+       V     V      E L   ALE  + +++   ++ +P+  + +
Sbjct: 249 AVEVKNSMVERGIVADEVTYRTLVYGFCRTEEL-EMALEMTDDMLS---LHFVPSVASCS 304

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            ++  + + G +D A +L   +      P+++    L+D LCK+ R  EA  L   M   
Sbjct: 305 FMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANR 364

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P  VT+ +LI+ LCK G +  A  + D M  KG       YN+LI+G C   N  +A
Sbjct: 365 GLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQA 424

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             LL+ MV     P+  +Y  +I GL + G       +   M       N Y ++TLISG
Sbjct: 425 RGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISG 484

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K+G  ++A +L+ +M++    PN V ++ +I+G CRVG   +A ++  +M++ G   +
Sbjct: 485 FCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPD 544

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            +TY SL+     +    KA E   D+  N  V N    + L++G C++G+L E   +W 
Sbjct: 545 NYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWD 604

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M +RG K D+++++ +++        E+   LF EM   E   +PD   +  +++   K
Sbjct: 605 EMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREM--KEKGVKPDNVFHTCMIDVHSK 662

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNI---------FLTALKEKLEAPQDGTDFLNELA 607
           + NI  +++  + M+  GC P++VT  +         +L++ +   E    G    N   
Sbjct: 663 EENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFT 722

Query: 608 IRLFKRQRTSGG----FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSN 661
              F     + G     K++   + +     T T+  +++  C+  +IQ AI+   +N
Sbjct: 723 YNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNN 780



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 137/544 (25%), Positives = 242/544 (44%), Gaps = 75/544 (13%)

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           V  E ++  +   + +   +E A+ +   M+   H   +V S + +++ + + G   +A 
Sbjct: 262 VADEVTYRTLVYGFCRTEELEMALEMTDDML-SLHFVPSVASCSFMVDGLRKRGHIDKAF 320

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
               H+     + ++PN    N +I  +C+      A +LFR M  R  EP+  TY  L+
Sbjct: 321 RLACHL---GELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILI 377

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             LCK   +D+A+ + D M+  G   T   +N LING C++    +A  L++ M  KG  
Sbjct: 378 HSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLA 437

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+  +Y+ LI GLC KG+L  A+ L   M  +    N  T+ T+I+G  K G   + AR+
Sbjct: 438 PSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARL 497

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M +     NE  ++ +I G  + G    A +L+ QM+++G  P+   Y +LI  LC 
Sbjct: 498 FDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCL 557

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
                +A+E + ++ NN    N+F+ ++LM GF + G+  +   IW +M       + + 
Sbjct: 558 TLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLIS 617

Query: 475 YSVLIHGLCE--DGK---------------------------------LREARMVWTQML 499
           ++V+++   +  DG+                                 + +A   W +M+
Sbjct: 618 FTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMI 677

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN----------- 548
           + GC P+VV Y+ +I+ LC +G +  A  L  EML    +  P+ FTYN           
Sbjct: 678 ADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLV--GRFLPNSFTYNCFLDFLANEGE 735

Query: 549 -----------------------ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
                                   L+   CK   I  +IDL+ +  + G  PD ++ +  
Sbjct: 736 LEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTI 795

Query: 586 LTAL 589
           +  L
Sbjct: 796 INEL 799



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 201/396 (50%), Gaps = 3/396 (0%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A  LF EM       D Y Y   +   C+   LD A  LL  M+  G   + V +NVL+ 
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLC+N  +  A ++ ++M  +G + +EVTY TL++G C    L+ A+ + D M++   +P
Sbjct: 239 GLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVP 298

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           +  +   +++GL K G      R+   + E     N +  + LI  L K+ +  +A +L+
Sbjct: 299 SVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLF 358

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           + M  +G +PN V Y+ LI  LC+ G  D+A  +   M   G     + Y+SL+ G+ + 
Sbjct: 359 RGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQH 418

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
              H+A  +  +M +     +   YS LI GLC  G L  A  +  +M   G   +V  +
Sbjct: 419 DNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTF 478

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++I G C  G+++EA +LF++M  ++    P+  T+N+++   C+  N+  +  L + M
Sbjct: 479 TTLISGFCKDGNMDEAARLFDKM--IDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQM 536

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           +DRG  PD  T    ++ L   L A +   +F+++L
Sbjct: 537 VDRGLTPDNYTYRSLISVLCLTLGAMK-AKEFVDDL 571



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 150/327 (45%), Gaps = 16/327 (4%)

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
           ++L RA D A VL         + +Y  S ++  L K  +   A  L+ +M++     + 
Sbjct: 136 LRLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDE 195

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
            VY+A I   C +   D A  +L  M + G   +A  Y+ LM G   + +  +AVE+   
Sbjct: 196 YVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNS 255

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +   V +EV Y  L++G C   +L  A  +   MLS    P V + S M+ GL   G 
Sbjct: 256 MVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGH 315

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           +++A +L   +   E    P++F  N L++ LCK      +  L   M +RG +P+ VT 
Sbjct: 316 IDKAFRLACHL--GELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTY 373

Query: 583 NIFLTALKEK--LEAPQDGTDFLNELAIR--LFKRQRTSGGF----------KIVEVMLQ 628
            I + +L ++  ++      D + E  IR  ++       G+           ++  M++
Sbjct: 374 AILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVE 433

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAAI 655
           K L+P  +++  ++  LCR   + +A+
Sbjct: 434 KGLAPSAASYSPLIAGLCRKGDLASAM 460



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 134/285 (47%), Gaps = 18/285 (6%)

Query: 59  AKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE 118
           A   + F D++ N+   L S+ L      +L+  +   G       +   MR     +  
Sbjct: 561 AMKAKEFVDDLENNCVVLNSFSLT-----TLMYGFCKEGRLTETYHIWDEMRARGVKLDL 615

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN----SVLNVIIQEGLYHRAL 174
            SF  I  A  K H  E+   LF  M +     + VK  N     +++V  +E    +AL
Sbjct: 616 ISFTVIVYAALKLHDGEKISVLFREMKE-----KGVKPDNVFHTCMIDVHSKEENIVQAL 670

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
             ++ ++        PN +T+ ++I  +C+ G + +A  L  EM V    P+ +TY   +
Sbjct: 671 NCWDKMIAD---GCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFL 727

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           D L  E  L++A +L   + ++GC    VTFN LI G CK G++  A  L+ N    G  
Sbjct: 728 DFLANEGELEKAKVLHATI-LEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFF 786

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           P+ ++Y+T+I+ LC  G+++KA  L + M+     P+ V Y  +I
Sbjct: 787 PDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILI 831


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 223/438 (50%), Gaps = 5/438 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           FN++L+ ++    Y   +  +      +   I P+  T +++I   C    +  A  +F 
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQF---EPNGITPDLCTLSILINCFCHQAHITLAFSVFA 116

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            +  R   P+  T  TL+ GLC    + +A+   D++   G     V++  LINGLCK G
Sbjct: 117 NILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTG 176

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           E    A+L+  +      P+ V YNT+I+ LC    L  A  +   M+     P+ VTY 
Sbjct: 177 ETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYT 236

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+I+G   +G   +   +L  M+ +  + N   ++ LI  L KEGK ++A  L   MM+ 
Sbjct: 237 TLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKA 296

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
             KP+   Y++LIDG   V +   A+ + + M   G   +   Y++++ G  ++    +A
Sbjct: 297 CIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEA 356

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           + ++++M   N + + V Y+ LI GLC++  L  A  +  +M  +G +PDV +Y+ ++ G
Sbjct: 357 MSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDG 416

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC +G +E+A ++F  +L        +V  Y +L+N LCK      ++DL + M D+GC 
Sbjct: 417 LCKSGRLEDAKEIFQRLLA--KGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCM 474

Query: 577 PDLVTCNIFLTALKEKLE 594
           PD VT +I + AL EK E
Sbjct: 475 PDAVTFDIIIRALFEKDE 492



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/386 (31%), Positives = 209/386 (54%), Gaps = 4/386 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T N +IK +C  G +  A+    ++  +  + D  +Y TL++GLCK         L
Sbjct: 125 PNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARL 184

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +++     P  V +N +IN LCKN  LG A  +   M +KG  P+ VTY TLIHG C+
Sbjct: 185 LRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCI 244

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+L +A SLL+ M      PN  T+  +I+ L K G+  +   +L  M +     + + 
Sbjct: 245 MGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFT 304

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++LI G F   + + A  ++  M ++G  P+   Y+ +I+GLC+    DEA  +  EM 
Sbjct: 305 YNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMK 364

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +     +  TY+SL+ G  ++    +A+ + K M +     +   Y++L+ GLC+ G+L 
Sbjct: 365 HKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLE 424

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYN 548
           +A+ ++ ++L++G   +V AY+ +I+ LC AG  +EAL L ++M   E K   PD  T++
Sbjct: 425 DAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKM---EDKGCMPDAVTFD 481

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRG 574
           I++ AL ++     +  +L  M+ RG
Sbjct: 482 IIIRALFEKDENDKAEKILREMIARG 507



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/380 (32%), Positives = 192/380 (50%), Gaps = 4/380 (1%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A+  F  M +    P  + +  ++  L         + L  + + +G  P   T ++LIN
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
             C    +  A  +  N+  +G  PN +T NTLI GLC +G + KA+   D++VA     
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           ++V+YGT+INGL K G     AR+L  +E      +  +Y+T+I+ L K     DA  ++
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            +M+ KG  P+ V Y+ LI G C +G   EA  +L EM       N  T++ L+    + 
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 451 GKGHKAVEIWKDMAKNNCVYNEV-CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           GK  +A  +   M K  C+  +V  Y+ LI G     +++ A+ V+  M  RG  PDV  
Sbjct: 281 GKMKEAKILLAVMMK-ACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQC 339

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y++MI+GLC    V+EA+ LF EM        PD+ TYN L++ LCK  ++  +I L   
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEM--KHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKR 397

Query: 570 MMDRGCDPDLVTCNIFLTAL 589
           M ++G  PD+ +  I L  L
Sbjct: 398 MKEQGIQPDVYSYTILLDGL 417



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 170/317 (53%), Gaps = 2/317 (0%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           ++ P+ + +N +I ++C+  L+ +A  ++ EM V+   PD+ TY TL+ G C    L EA
Sbjct: 192 SVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEA 251

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIH 305
             LL+EM++    P   TFN+LI+ L K G++ + AK++  + +K C+ P+  TYN+LI 
Sbjct: 252 FSLLNEMKLKNINPNVCTFNILIDALSKEGKM-KEAKILLAVMMKACIKPDVFTYNSLID 310

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G  L   +  A  +   M      P+   Y  +INGL K     +   +   M+ +    
Sbjct: 311 GYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIP 370

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   Y++LI GL K    E A+ L K+M E+G +P+   Y+ L+DGLC+ G+ ++A+EI 
Sbjct: 371 DIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIF 430

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             ++  G   N   Y+ L+    ++G   +A+++   M    C+ + V + ++I  L E 
Sbjct: 431 QRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEK 490

Query: 486 GKLREARMVWTQMLSRG 502
            +  +A  +  +M++RG
Sbjct: 491 DENDKAEKILREMIARG 507



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 156/317 (49%), Gaps = 38/317 (11%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K  V  +N+++N + +  L   A + Y+ ++      I P+ +T+  +I   C +G +  
Sbjct: 194 KPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK---GISPDVVTYTTLIHGFCIMGHLKE 250

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ--------------VD 256
           A  L  EM ++N  P++ T+  L+D L KE ++ EA +LL  M               +D
Sbjct: 251 AFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLID 310

Query: 257 GCF---------------------PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           G F                     P    +  +INGLCK   +  A  L + M  K  +P
Sbjct: 311 GYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIP 370

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           + VTYN+LI GLC   +L++A++L  RM      P+  +Y  +++GL K GR  D   + 
Sbjct: 371 DIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIF 430

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             +  + +H+N + Y+ LI+ L K G  ++A+ L  +M +KGC P+ V +  +I  L   
Sbjct: 431 QRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEK 490

Query: 416 GKPDEAEEILFEMINNG 432
            + D+AE+IL EMI  G
Sbjct: 491 DENDKAEKILREMIARG 507



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 4/210 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI  Y    + K  + V Y M +       + +  +     K  +V+EA+ LF  M
Sbjct: 304 TYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEM 363

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V ++NS+++ + +     RA+     +   K   I P+  ++ +++  +C+
Sbjct: 364 KHKNMIPDIV-TYNSLIDGLCKNHHLERAIALCKRM---KEQGIQPDVYSYTILLDGLCK 419

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +++A ++F+ +  +    +++ Y  L++ LCK    DEA+ L  +M+  GC P  VT
Sbjct: 420 SGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVT 479

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           F+++I  L +  E  +A K++  M  +G L
Sbjct: 480 FDIIIRALFEKDENDKAEKILREMIARGLL 509


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/496 (29%), Positives = 235/496 (47%), Gaps = 43/496 (8%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V S+N+V+    +     +ALE  N +   K      + +T+ ++I   C+ G +D A+ 
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEM---KGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
             +EM     E D+  Y +L+ G C    LD    L DE+   G  P  +T+N LI G C
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G+L  A+++ + M  +G  PN  TY  LI GLC  G   +A+  L+ M+     PN V
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAV 353

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  IIN L K G   D   ++  M++R+   +   Y+ L+ GL  +G  ++A KL   M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413

Query: 394 MEKG--CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           ++      P+ + Y+ALI GLC+  +  +A +I   ++    A +  T + L+    ++G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
             +KA+E+WK ++ +  V N   Y+ +I G C+ G L  A+ +  +M     +P V  Y+
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533

Query: 512 SMIHGLCNAGSVEEALKLFNEML--------------------CLEPKS----------- 540
            ++  LC  GS+++A +LF EM                       + KS           
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593

Query: 541 --QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
              PD+FTY+ L+N   K   +  +I   + M+D G +PD   C+  L     K    Q 
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-----KYCISQG 648

Query: 599 GTDFLNELAIRLFKRQ 614
            TD L EL  +L  + 
Sbjct: 649 ETDKLTELVKKLVDKD 664



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 213/432 (49%), Gaps = 39/432 (9%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           +++P+  ++N VI+  C    ++ A++L  EM    C   + T+  L+D  CK  ++DEA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           +  L EM+  G     V +  LI G C  GEL R   L D +  +G  P  +TYNTLI G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C  G L +A  + + M+     PN  TY  +I+GL  +G+  +  + L  M E+    N
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPN 351

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+ +I+ L K+G   DA+++ + M ++  +P+ + Y+ L+ GLC  G  DEA ++L+
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411

Query: 427 EMINNGCAA--NAFTYSSLMKGF-----------------------------------FE 449
            M+ +      +  +Y++L+ G                                     +
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           +G  +KA+E+WK ++ +  V N   Y+ +I G C+ G L  A+ +  +M     +P V  
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ ++  LC  GS+++A +LF EM      + PDV ++NI+++   K  +I  +  LL  
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEM--QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589

Query: 570 MMDRGCDPDLVT 581
           M   G  PDL T
Sbjct: 590 MSRAGLSPDLFT 601



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 178/323 (55%)

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N+L+ GLC+N E G+A  L+  M     +P+  +YNT+I G C    L+KA+ L + M  
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           S C  + VT+G +I+   K G+  +    L  M+      +  +Y++LI G    G+ + 
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
              L+ +++E+G  P  + Y+ LI G C++G+  EA EI   MI  G   N +TY+ L+ 
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G    GK  +A++    M + +   N V Y+++I+ LC+DG + +A  +   M  R  +P
Sbjct: 326 GLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           D + Y+ ++ GLC  G ++EA KL   ML     + PDV +YN L++ LCK++ +  ++D
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445

Query: 566 LLNSMMDRGCDPDLVTCNIFLTA 588
           + + ++++    D VT NI L +
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNS 468



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 205/450 (45%), Gaps = 63/450 (14%)

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           NA+ +F++  V +     +    LM  L +    + A     +M     F   V+ + L+
Sbjct: 56  NAVSVFQQ-AVDSGSSLAFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLL 114

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
               +  + G A  ++  M  +G   N   +N L+ GLC      KAVSLL  M  +  M
Sbjct: 115 ECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM 174

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA-EDAMK 388
           P+  +Y T+I G                                    F EGK  E A++
Sbjct: 175 PDVFSYNTVIRG------------------------------------FCEGKELEKALE 198

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L  +M   GC  + V +  LID  C+ GK DEA   L EM   G  A+   Y+SL++GF 
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           + G+  +   ++ ++ +       + Y+ LI G C+ G+L+EA  ++  M+ RG +P+V 
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +I GLC  G  +EAL+  N M  +E   +P+  TYNI++N LCK   ++ +++++ 
Sbjct: 319 TYTGLIDGLCGVGKTKEALQPLNLM--IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
            M  R   PD +T NI L  L  K +        L+E +             K++ +ML+
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGD--------LDEAS-------------KLLYLMLK 415

Query: 629 --KFLSPQTSTWERVVQELCRPKRIQAAIN 656
              +  P   ++  ++  LC+  R+  A++
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALD 445



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 194/397 (48%), Gaps = 7/397 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI+ + + G+    + +   +          ++  + + + K   ++EA  +F  M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E   +  V ++  +++ +   G    AL+  N ++        PN +T+N++I  +C+
Sbjct: 309 I-ERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEE---PNAVTYNIIINKLCK 364

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP-- 262
            GLV +A+++   M  R   PD  TY  L+ GLC +  LDEA  LL  M  D  +  P  
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +++N LI+GLCK   L +A  + D +  K    + VT N L++     G+++KA+ L  +
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           +  SK + N  TY  +I+G  K G       +L  M   +   + + Y+ L+S L KEG 
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            + A +L+++M      P+ V ++ +IDG  + G    AE +L  M   G + + FTYS 
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYN-EVCYSVL 478
           L+  F + G   +A+  +  M  +    +  +C SVL
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 181/393 (46%), Gaps = 51/393 (12%)

Query: 82  GDS----TFYSLIQHYANSGDFK-SLEMVLYRMRREKR--VVLEKSFIFIFKAYGKAHLV 134
           GDS    T+ +LI+ +   G  K + E+  + + R  R  V      I      GK    
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK---T 333

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +EA++  + M+++      V ++N ++N + ++GL   A+E    +   K     P+ +T
Sbjct: 334 KEALQPLNLMIEKDEEPNAV-TYNIIINKLCKDGLVADAVEIVELM---KKRRTRPDNIT 389

Query: 195 FNLVIKTVCRLGLVDNAIQLFREM--PVRNCEPDIYTYCTLMDGLCKENRLDEAV----L 248
           +N+++  +C  G +D A +L   M       +PD+ +Y  L+ GLCKENRL +A+    L
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449

Query: 249 LLDEMQVDGCFPTPV-------------------------------TFNVLINGLCKNGE 277
           L++++       T +                               T+  +I+G CK G 
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           L  A  L+  M +    P+   YN L+  LC +G+LD+A  L + M      P+ V++  
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +I+G +K G       +L+ M       + + YS LI+   K G  ++A+  + +M++ G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
            +P+  +  +++      G+ D+  E++ ++++
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 148/285 (51%), Gaps = 12/285 (4%)

Query: 134 VEEAIRLFHTMV-DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           ++EA +L + M+ D  +    V S+N++++ + +E   H+AL+ Y+ +V         + 
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DR 459

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMP----VRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +T N+++ +  + G V+ A++L++++     VRN +    TY  ++DG CK   L+ A  
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD----TYTAMIDGFCKTGMLNVAKG 515

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LL +M+V    P+   +N L++ LCK G L +A +L + M      P+ V++N +I G  
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G++  A SLL  M  +   P+  TY  +IN  +KLG   +       M +  F  + +
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH 635

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           I  +++     +G+ +   +L K++++K    +  +   ++D +C
Sbjct: 636 ICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 114/389 (29%), Positives = 207/389 (53%), Gaps = 2/389 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  ++N +I    +   +D+A Q+F  M  R   PD+ TY  ++  LC   +L+ A  +
Sbjct: 129 PDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEV 188

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           +DE+  DGC P+ +T+ +LI      G +  A +L D +  +G  P+  TYN +I G+C 
Sbjct: 189 MDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICK 248

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G  D+A+  +  + A  C P+ V+Y  ++   +   R  DG R++  M       N   
Sbjct: 249 EGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVT 308

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S LIS   +EG+  +A+ + + M EKG  P++  Y  LI   C+ G+ D A E L +M+
Sbjct: 309 HSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMV 368

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           ++GC  +   Y++++    + G    A+++++ + +  C      Y+ +   L   G   
Sbjct: 369 SDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKI 428

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  + ++M+ +G  PD + Y+S+I  LC  G V+EA+ L  +M     + QP V ++NI
Sbjct: 429 KALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEA--TRFQPTVISFNI 486

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           +L  +CK   +   I+LL +M+++GC P+
Sbjct: 487 VLLGMCKAHRVFEGIELLITMVEKGCLPN 515



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 142/554 (25%), Positives = 266/554 (48%), Gaps = 28/554 (5%)

Query: 25  LSLTTIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDS 84
           L+  TIP  RS    S+ +   SNK        +A+  QP    + N           D+
Sbjct: 17  LAKPTIPQSRSD---SIPACRFSNKTHLRNVTSSAEFRQPHFPNLDNR----------DA 63

Query: 85  TFYSLIQHYANSGDFKS----LEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
               L+     +G        LE V+ +  +   V+  K    + K +  +  +++A+R+
Sbjct: 64  HLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTK----LIKGFFNSRNLKKAMRV 119

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
              +  E +    V S+N++++   +      A + ++ +   +     P+ +T+N++I 
Sbjct: 120 MEIL--ETYGDPDVYSYNAMISGFSKANQIDSANQVFDRM---RSRGFSPDVVTYNIMIG 174

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
           ++C  G ++ A ++  E+    C+P + TY  L++    E R++EA+ L DE+   G  P
Sbjct: 175 SLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRP 234

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T+N +I G+CK G   RA   V ++  +GC P+ V+YN L+     K   +    L+
Sbjct: 235 DLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLM 294

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             MV S C PN VT+  +I+   + GR  +   VL  M+E+    + Y Y  LIS   KE
Sbjct: 295 KDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKE 354

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G+ + A++  ++M+  GC P+ V Y+ ++  LC+ G  D A ++  ++   GC      Y
Sbjct: 355 GRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAY 414

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +++    +  G   KA+E+  +M +     +E+ Y+ LI  LC DG + EA  +   M +
Sbjct: 415 NTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEA 474

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
              +P V++++ ++ G+C A  V E ++L   M  +E    P+  +Y +L+  +      
Sbjct: 475 TRFQPTVISFNIVLLGMCKAHRVFEGIELLITM--VEKGCLPNETSYVLLIEGIAYAGWR 532

Query: 561 SHSIDLLNSMMDRG 574
           + +++L NS+   G
Sbjct: 533 AEAMELANSLYRLG 546



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 196/369 (53%), Gaps = 8/369 (2%)

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
           +PD+Y+Y  ++ G  K N++D A  + D M+  G  P  VT+N++I  LC  G+L  A +
Sbjct: 128 DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFE 187

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           ++D +   GC P+ +TY  LI    L+G +++A+ L D +V+    P+  TY  II G+ 
Sbjct: 188 VMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGIC 247

Query: 344 KLG---RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           K G   RA+D  R L +   R  + +   Y+ L+     + + ED  +L K M+  GC+P
Sbjct: 248 KEGMEDRALDFVRHLSA---RGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEP 304

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           N V +S LI   CR G+  EA  +L  M   G   ++++Y  L+  F + G+   A+E  
Sbjct: 305 NVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYL 364

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           + M  + C+ + V Y+ ++  LC+ G    A  V+ ++   GC P V AY++M   L + 
Sbjct: 365 EKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSC 424

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           G+  +AL++ +EM+       PD  TYN L++ LC+   +  +I LL  M      P ++
Sbjct: 425 GNKIKALEMISEMI--RKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVI 482

Query: 581 TCNIFLTAL 589
           + NI L  +
Sbjct: 483 SFNIVLLGM 491



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 194/403 (48%), Gaps = 19/403 (4%)

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           L+N  C+ G+   +   ++++  KG  P+ V    LI G     NL KA+ +++ ++ + 
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVME-ILETY 126

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             P+  +Y  +I+G  K  +     +V   M  R F  +   Y+ +I  L   GK E A 
Sbjct: 127 GDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           ++  ++++ GCKP+ + Y+ LI+     G+ +EA E+  E+++ G   + +TY+++++G 
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
            + G   +A++  + ++   C  + V Y++L+       +  +   +   M+  GC+P+V
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
           V +S +I   C  G V EA+ +   M   E    PD ++Y+ L++A CK+  +  +I+ L
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMK--EKGLTPDSYSYDPLISAFCKEGRLDLAIEYL 364

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL-------AIRLFKRQRTS--- 617
             M+  GC PD+V  N  L  L  K        D   +L        +R +    ++   
Sbjct: 365 EKMVSDGCLPDIVNYNTILATLC-KFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWS 423

Query: 618 -----GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                   +++  M++K + P   T+  ++  LCR   +  AI
Sbjct: 424 CGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAI 466



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 91/170 (53%), Gaps = 7/170 (4%)

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           +G A L   A+ +F  + DE  C  TV+++N++ + +   G   +ALE  + ++      
Sbjct: 389 FGCADL---ALDVFEKL-DEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRK---G 441

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I P+ +T+N +I  +CR GLVD AI L  +M     +P + ++  ++ G+CK +R+ E +
Sbjct: 442 IDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGI 501

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
            LL  M   GC P   ++ +LI G+   G    A +L ++++  G +  +
Sbjct: 502 ELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGD 551


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 210/405 (51%), Gaps = 2/405 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           MNI  + +TFN++I  +CR G    A      M V   +P++ TY T+++G C   + + 
Sbjct: 211 MNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEA 270

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  +   M+     P   T+N  I+ LCK   +  A+ ++  +   G +PN VTYN LI 
Sbjct: 271 ASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALID 330

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G C KG+LDKA +  D M+    + +  TY  +I+ L    R  +   ++  M E+    
Sbjct: 331 GCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEP 390

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +   Y+  I+G  + G A+ A+ L+ +M+EK  +P    Y++LID   +  +  EAEE  
Sbjct: 391 DVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKF 450

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            + I  G   +   +++L+ G   +G   +A ++ K+M     V +EV ++ L+ G C +
Sbjct: 451 KKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRE 510

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            K+ EA+ +  +M  RG KPD ++Y+++I G    G +++AL++F+EML L     P + 
Sbjct: 511 RKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSL--GFDPTLL 568

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           TYN L+    K     H+ +LL  M  +G  PD  T    + A+K
Sbjct: 569 TYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMK 613



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 228/427 (53%), Gaps = 8/427 (1%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           ++  MV + + K ++ +FN ++N++ +EG + +A +F  H+   +   + PN +T+N VI
Sbjct: 204 VYEEMV-KMNIKSSIVTFNIMINILCREGKWKKAKDFIGHM---EVYGVKPNVVTYNTVI 259

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
              C  G  + A ++F+ M  +N +PD YTY + +  LCKE R++EA  +L ++   G  
Sbjct: 260 NGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV 319

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  VT+N LI+G C  G+L +A    D M  +G + +  TYN LIH L L+  +++A  +
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM 379

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           +  M      P+ VTY   ING  + G A     +   M E+        Y++LI    K
Sbjct: 380 IKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGK 439

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             +  +A + +K+ +++G  P+ ++++ALIDG C  G  D A ++L EM N     +  T
Sbjct: 440 RNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVT 499

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           +++LM+G+    K  +A ++  +M +     + + Y+ LI G  + G +++A  V+ +ML
Sbjct: 500 FNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEML 559

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQS 558
           S G  P ++ Y+++I G    G  + A +L  EM   + K   PD  TY  ++ A+    
Sbjct: 560 SLGFDPTLLTYNALIQGYSKIGEADHAEELLREM---QSKGITPDDSTYLYVIEAMKTND 616

Query: 559 NISHSID 565
           ++  + D
Sbjct: 617 DLVENDD 623



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 223/444 (50%), Gaps = 5/444 (1%)

Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
           +T   F+ +L+   Q      ALE  N +   K   I+P T T N ++  + +L  +  A
Sbjct: 145 KTTLVFDLLLSAYCQFRKPDEALECLNLM---KENEIIPKTETCNSLLSLLLKLNKIKMA 201

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
             ++ EM   N +  I T+  +++ LC+E +  +A   +  M+V G  P  VT+N +ING
Sbjct: 202 WFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVING 261

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            C  G+   A+K+   M  K   P+  TYN+ I  LC +  +++A  +L +++ S  +PN
Sbjct: 262 YCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPN 321

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY  +I+G    G           M  R    + + Y+ LI  LF E + E+A  + K
Sbjct: 322 AVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIK 381

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M EKG +P+ V Y+  I+G CR G   +A  +  EM+         TY+SL+  F +  
Sbjct: 382 EMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRN 441

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           +  +A E +K   K   + + + ++ LI G C +G +  A  +  +M +    PD V ++
Sbjct: 442 RMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFN 501

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +++ G C    VEEA KL +EM   E   +PD  +YN L++   K+ ++  ++++ + M+
Sbjct: 502 TLMQGYCRERKVEEAKKLLDEMK--ERGIKPDHISYNTLISGYSKRGDMKDALEVFDEML 559

Query: 572 DRGCDPDLVTCNIFLTALKEKLEA 595
             G DP L+T N  +    +  EA
Sbjct: 560 SLGFDPTLLTYNALIQGYSKIGEA 583



 Score = 46.2 bits (108), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 80/195 (41%), Gaps = 28/195 (14%)

Query: 463 MAKNNC-VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           +A+N   V   + + +L+   C+  K  EA      M      P     +S++  L    
Sbjct: 137 LARNRLNVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLN 196

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            ++ A  ++ EM+ +  KS   + T+NI++N LC++     + D +  M   G  P++VT
Sbjct: 197 KIKMAWFVYEEMVKMNIKSS--IVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVT 254

Query: 582 CNIFLTA--LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
            N  +    L+ K EA                         KI + M  K L P   T+ 
Sbjct: 255 YNTVINGYCLRGKFEAAS-----------------------KIFKTMKDKNLKPDCYTYN 291

Query: 640 RVVQELCRPKRIQAA 654
             +  LC+ +RI+ A
Sbjct: 292 SFISRLCKERRIEEA 306


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 232/479 (48%), Gaps = 39/479 (8%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A + FH M+   +    + SF  +L+ + +   Y +    YN +   +   I P+  T 
Sbjct: 79  QAFQFFHLMMYS-NPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQM---RLSGISPDCCTL 134

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N+++  +C +  V   + +   +  R   PDI TY TL+ GLC E+R+ +A LL   MQ 
Sbjct: 135 NILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQK 194

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL------PNEVTYNTLIHGLC- 308
            GC P  +T+  L+ GLC+ G +  A KL   M     L      P  ++Y+ +I  LC 
Sbjct: 195 LGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCK 254

Query: 309 ---------------LKGNLDKAVS-----------LLDRMVASKCMPNEVTYGTIINGL 342
                          ++G     +S           L + MV     PN VT+  +I+ L
Sbjct: 255 DRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNVLIDVL 314

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K G+ ++   +L  M +R    N   Y++LI G    G    A +L+  M  KGC+P+ 
Sbjct: 315 CKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDV 374

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           + Y+ LI+G C+  K +EA ++   M+  G   +  TY +L+ G F+ GK   A +++  
Sbjct: 375 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 434

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M       +   Y + ++GLC++G L EA  ++ ++ S   K D+  ++ +I GLC AG 
Sbjct: 435 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 494

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +E A +LF ++   + + QPDV TYNI+++  C+   +  +  L   M   GC PD +T
Sbjct: 495 LETAWELFEKLP--QEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKIT 551



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 142/487 (29%), Positives = 228/487 (46%), Gaps = 58/487 (11%)

Query: 203 CRLGLVD--NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
           C+ G +    A Q F  M   N  P + ++  L+ GL K     +   L ++M++ G  P
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              T N+L+N LC    +G    ++  +  +G +P+ VTY TLI GLC++  + KA  L 
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM--EERKFHVN----EYIYSTLI 374
            RM    C PN +TYGT++ GL + G      ++   M  +   + +N       YS +I
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 375 SG------------LFKEGKA---------------EDAMKLWKQMMEKGCKPNTVVYSA 407
                         LF+E K                E+A +L+ +M+ +G +PN V ++ 
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKRLFNEMVNQGVQPNVVTFNV 309

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LID LC+ GK  EA+++L  MI  G   N  TY+SL++GF   G  + A E++  M    
Sbjct: 310 LIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG 369

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           C  + +CY+VLI+G C+  K+ EA  ++  ML  G +PDV  Y +++ GL   G V +A 
Sbjct: 370 CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAK 429

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           KLF  M         D++ Y I LN LCK   +  +++L N +       D+   N  + 
Sbjct: 430 KLFGVMKVYGIPG--DLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLI- 486

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                     DG          L K  +    +++ E + Q+ L P   T+  ++ E CR
Sbjct: 487 ----------DG----------LCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCR 526

Query: 648 PKRIQAA 654
             ++  A
Sbjct: 527 GGQVVKA 533



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 206/396 (52%), Gaps = 16/396 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR------NCEPDIYTYCTLMDGLCKENRL 243
           PN +T+  ++K +CR G +  A++L +EM         N +P + +Y  ++D LCK+ R 
Sbjct: 199 PNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRRE 258

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEA  L +EM+V G  PT +++  L+           A +L + M  +G  PN VT+N L
Sbjct: 259 DEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVL 310

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  LC +G + +A  LL+ M+    +PN +TY ++I G   +G       + +SM  +  
Sbjct: 311 IDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGC 370

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+ LI+G  K  K E+AMKL+  M++ G +P+   Y AL+ GL + GK  +A++
Sbjct: 371 EPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKK 430

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +   M   G   + + Y   + G  ++G   +A+E++  +   N   +  C++ LI GLC
Sbjct: 431 LFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLC 490

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + GKL  A  ++ ++     +PDVV Y+ MIH  C  G V +A  LF +M   +    PD
Sbjct: 491 KAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKME--KNGCTPD 548

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
             TY  L+    +   +   ++LL+ M+ R    D+
Sbjct: 549 KITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 216/418 (51%), Gaps = 12/418 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + K     H + +A  LF T + +  C     ++ +++  + + G    AL+ +  
Sbjct: 168 TYTTLIKGLCMEHRISKAALLF-TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQE 226

Query: 180 IVNAKHM---NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           ++N   +   N  P  ++++++I  +C+    D A  LF EM V+   P + +Y +LM  
Sbjct: 227 MLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM-- 284

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
                  +EA  L +EM   G  P  VTFNVLI+ LCK G++  A  L++ M  +G +PN
Sbjct: 285 ------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPN 338

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            +TYN+LI G CL G+L+ A  L   M +  C P+ + Y  +ING  K  +  +  ++  
Sbjct: 339 LLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYN 398

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            M +     +   Y  L++GLF+ GK  DA KL+  M   G   +  +Y   ++GLC+ G
Sbjct: 399 GMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNG 458

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
              EA E+  ++ +     +   ++ L+ G  ++GK   A E+++ + +     + V Y+
Sbjct: 459 CLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYN 518

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           ++IH  C  G++ +A +++ +M   GC PD + Y+++I G   +  +E+ ++L + M+
Sbjct: 519 IMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMV 576


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/567 (25%), Positives = 277/567 (48%), Gaps = 47/567 (8%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMR-REKRVVLE--KSFIFIFKAYGKAHLV 134
           S  L +  + SL++       F  +E+VL  M+ R  +  LE   S I ++  YG    V
Sbjct: 88  SSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYG---FV 144

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV--NAKH-MNILPN 191
           ++A+++F+ + + ++C   V + NS+LN +++ G    A E Y+ ++     H ++++ +
Sbjct: 145 DKAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVD 204

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             +  +V+K +C +G V+   +L  +     C P++  Y  ++DG CK+  L  A  + +
Sbjct: 205 NYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFE 264

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGE---------------------------------- 277
           E+++ G  PT  T+  LI+G CK G+                                  
Sbjct: 265 ELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYG 324

Query: 278 -LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            + +AA+++  M   GC P+  TYN LI+  C  G + +A   L+R      +PN+ +Y 
Sbjct: 325 LVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYT 384

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +++   K G  V  + +L  + E     +   Y   I G    G+ + A+ + ++MMEK
Sbjct: 385 PLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEK 444

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+  +Y+ L+ GLC+ G+   A+ +L EM++     +A+ Y++L+ GF  + +  KA
Sbjct: 445 GVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKA 504

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            E+++ +         V Y+V+I GLC+ GK+ +A     +M      PD   +S++I G
Sbjct: 505 TELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDG 564

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
                 ++ ALK+F +M  ++ K +P+V  Y  L+N  CK +++S +  +  +M     +
Sbjct: 565 YVKQHDLDSALKMFGQM--MKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLE 622

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFL 603
           P++VT  I +     K   P+    F 
Sbjct: 623 PNVVTYTILIGGF-SKTGKPEKAASFF 648



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 225/488 (46%), Gaps = 51/488 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +  +G F+ ++ +L  M      V  K F  I  A  K  LV++A  +   M
Sbjct: 277 TYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMR-M 335

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E  C+  + ++N ++N     G    A EF   +  AK   +LPN  ++  ++   C+
Sbjct: 336 MTEMGCEPDITTYNILINFSCSGGRIKEAEEF---LERAKERTLLPNKFSYTPLMHAYCK 392

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G    A  +  ++     +PD+ +Y   + G      +D A+++ ++M   G FP    
Sbjct: 393 QGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQI 452

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NVL++GLCK G    A  L+  M      P+   Y TL+ G      LDKA  L + ++
Sbjct: 453 YNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVM 512

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    P  V Y  +I GL K G+  D    +  M+      +EY +ST+I G  K+   +
Sbjct: 513 SKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLD 572

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A+K++ QMM++  KPN V Y++LI+G C++     AE++   M +     N  TY+ L+
Sbjct: 573 SALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILI 632

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL---------------------- 482
            GF ++GK  KA   ++ M  NNC+ N+  +  LI+GL                      
Sbjct: 633 GGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLIL 692

Query: 483 -------------------------CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
                                    C+ G +  A+++ T+ML +G   D V +S+++HGL
Sbjct: 693 DFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGL 752

Query: 518 CNAGSVEE 525
           C  G  +E
Sbjct: 753 CQTGKSKE 760



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 228/484 (47%), Gaps = 30/484 (6%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKR---TVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           I   Y K   ++ A R+F    +E   K    T++++ ++++   + G +    +  N +
Sbjct: 246 IIDGYCKKGDLKRATRVF----EELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEM 301

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
            N   +N+  N   FN +I    + GLVD A ++ R M    CEPDI TY  L++  C  
Sbjct: 302 -NVMGLNV--NVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSG 358

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            R+ EA   L+  +     P   ++  L++  CK G+   A+ ++  +   G  P+ V+Y
Sbjct: 359 GRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSY 418

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
              IHG    G +D A+ + ++M+     P+   Y  +++GL K GR      +L  M +
Sbjct: 419 GAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLD 478

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                + Y+Y+TL+ G  +  + + A +L++ +M KG  P  V Y+ +I GLC+ GK  +
Sbjct: 479 LNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTD 538

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A   + +M     A + +T+S+++ G+ +      A++++  M K     N V Y+ LI+
Sbjct: 539 AVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLIN 598

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLE 537
           G C+   +  A  V+  M S   +P+VV Y+ +I G    G  E+A   F  ML   CL 
Sbjct: 599 GFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCL- 657

Query: 538 PKSQPDVFTYNILLNALCKQSNI------------SHSIDLLNSMMDRGCDPDLVTCNIF 585
               P+  T++ L+N L   +N             S  +D   +M+  G    + T N  
Sbjct: 658 ----PNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSI 713

Query: 586 LTAL 589
           +  L
Sbjct: 714 IVCL 717



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 204/433 (47%), Gaps = 22/433 (5%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGK-AHLVEEAIRLFH 142
           +T+  LI    + G  K  E  L R +    +  + S+  +  AY K    V  +  LF 
Sbjct: 346 TTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFK 405

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM--NILPNTLTFNLVIK 200
             + E   K  + S+ + ++  +  G    AL     +V  K M   + P+   +N+++ 
Sbjct: 406 --IAETGDKPDLVSYGAFIHGSVAGGEIDVAL-----MVREKMMEKGVFPDAQIYNVLMS 458

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+ G    A  L  EM   N +PD Y Y TL+DG  + N LD+A  L + +   G  P
Sbjct: 459 GLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDP 518

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             V +NV+I GLCK G++  A   V+ M +    P+E T++T+I G   + +LD A+ + 
Sbjct: 519 GVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMF 578

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
            +M+  K  PN V Y ++ING  K+       +V  +M+      N   Y+ LI G  K 
Sbjct: 579 GQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKT 638

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG-------KPDEAEEILF-----EM 428
           GK E A   ++ M+   C PN   +  LI+GL  +        K +E +  L       M
Sbjct: 639 GKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATM 698

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I+ G +    TY+S++    + G    A  +   M +   + + VC+S L+HGLC+ GK 
Sbjct: 699 ISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKS 758

Query: 489 REARMVWTQMLSR 501
           +E R + +  L++
Sbjct: 759 KEWRNIISGDLTK 771



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 160/323 (49%), Gaps = 15/323 (4%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           + ++++  I+     +A E +  +V +K ++  P  + +N++IK +C+ G + +A+    
Sbjct: 488 YATLVDGFIRNNELDKATELF-EVVMSKGID--PGVVGYNVMIKGLCKCGKMTDAVSYVN 544

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M + N  PD YT+ T++DG  K++ LD A+ +  +M      P  V +  LING CK  
Sbjct: 545 KMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIA 604

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           ++ RA K+   M      PN VTY  LI G    G  +KA S  + M+ + C+PN+ T+ 
Sbjct: 605 DMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFH 664

Query: 337 TIINGLVKLGRAV---------DGARVL---MSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +INGL  +             D + +L    +M    +      Y+++I  L K G  +
Sbjct: 665 YLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVD 724

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A  L  +M+ KG   ++V +SAL+ GLC+ GK  E   I+   +       AF YS  +
Sbjct: 725 TAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKL 784

Query: 445 KGFFESGKGHKAVEIWKDMAKNN 467
             +   GK  +A  I  ++ +++
Sbjct: 785 DKYLYDGKPSEASYILLNLIEDS 807



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 3/126 (2%)

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           W      +   N V YS L+  + +     E  +V   M +R  KP + A +S+I     
Sbjct: 81  WASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAE 140

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP-- 577
            G V++A+K+F  M+C      P V   N LLN L K   +  + +L + M++RG D   
Sbjct: 141 YGFVDKAVKMF-YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGL 199

Query: 578 DLVTCN 583
           DLV  N
Sbjct: 200 DLVVDN 205



 Score = 41.2 bits (95), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 92/235 (39%), Gaps = 48/235 (20%)

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN------------CVYNEVCYSVLIHGLC 483
           N   YSSL+K   +     +   + +DM   N            CVY E       +G  
Sbjct: 92  NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAE-------YGFV 144

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           +    +  +M +       C P VVA +S+++ L   G V+ A +L+++ML        D
Sbjct: 145 D----KAVKMFYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLD 200

Query: 544 VFTYN----ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
           +   N    I++  LC    +     L++     GC P++V  N+ +    +K +  +  
Sbjct: 201 LVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKR-- 258

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  A R+F+           E+ L+ FL P   T+  ++   C+  + Q  
Sbjct: 259 -------ATRVFE-----------ELKLKGFL-PTLETYGALIDGFCKAGKFQVV 294


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 235/492 (47%), Gaps = 23/492 (4%)

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
           V+ +EG+  +A   ++ ++ +    ++P    +  +I+  CR   V    +L  EM  RN
Sbjct: 356 VMSKEGVMEKAKALFDGMIAS---GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
                YTY T++ G+C    LD A  ++ EM   GC P  V +  LI    +N   G A 
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +++  M  +G  P+   YN+LI GL     +D+A S L  MV +   PN  TYG  I+G 
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
           ++        + +  M E     N+ + + LI+   K+GK  +A   ++ M+++G   + 
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
             Y+ L++GL +  K D+AEEI  EM   G A + F+Y  L+ GF + G   KA  I+ +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +     N + Y++L+ G C  G++ +A+ +  +M  +G  P+ V Y ++I G C +G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           + EA +LF+EM        PD F Y  L++  C+ +++  +I +  +   +GC       
Sbjct: 713 LAEAFRLFDEMKL--KGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPF 769

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           N  +  +  K    +  T+ LN L    F R                F  P   T+  ++
Sbjct: 770 NALINWVF-KFGKTELKTEVLNRLMDGSFDR----------------FGKPNDVTYNIMI 812

Query: 643 QELCRPKRIQAA 654
             LC+   ++AA
Sbjct: 813 DYLCKEGNLEAA 824



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 239/493 (48%), Gaps = 20/493 (4%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           ++P   T++++I  +C++  +++A  L  EM       D +TY  L+DGL K    D A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+ EM   G    P  ++  I  + K G + +A  L D M   G +P    Y +LI G 
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFHVN 366
           C + N+ +   LL  M     + +  TYGT++ G+   G  +DGA  ++  M       N
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD-LDGAYNIVKEMIASGCRPN 451

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             IY+TLI    +  +  DAM++ K+M E+G  P+   Y++LI GL +  + DEA   L 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM+ NG   NAFTY + + G+ E+ +   A +  K+M +   + N+V  + LI+  C+ G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ EA   +  M+ +G   D   Y+ +++GL     V++A ++F EM        PDVF+
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM--RGKGIAPDVFS 629

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           Y +L+N   K  N+  +  + + M++ G  P+++  N+ L       E  +   + L+E+
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI-EKAKELLDEM 688

Query: 607 AIRLF---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           +++                 K    +  F++ + M  K L P +  +  +V   CR   +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 652 QAAINKCWSNLYG 664
           + AI    +N  G
Sbjct: 749 ERAITIFGTNKKG 761



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 201/441 (45%), Gaps = 36/441 (8%)

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           Y  +V  K  NI+ +  T+  V+K +C  G +D A  + +EM    C P++  Y TL+  
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
             + +R  +A+ +L EM+  G  P    +N LI GL K   +  A   +  M   G  PN
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             TY   I G         A   +  M     +PN+V    +IN   K G+ ++      
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
           SM ++    +   Y+ L++GLFK  K +DA +++++M  KG  P+   Y  LI+G  ++G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
              +A  I  EM+  G   N   Y+ L+ GF  SG+  KA E+  +M+      N V Y 
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF--NEML 534
            +I G C+ G L EA  ++ +M  +G  PD   Y++++ G C    VE A+ +F  N+  
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761

Query: 535 CLEPKS----------------------------------QPDVFTYNILLNALCKQSNI 560
           C    +                                  +P+  TYNI+++ LCK+ N+
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 561 SHSIDLLNSMMDRGCDPDLVT 581
             + +L + M +    P ++T
Sbjct: 822 EAAKELFHQMQNANLMPTVIT 842



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 240/549 (43%), Gaps = 51/549 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI+ Y    + +    +L  M++   V+   ++  + K    +  ++ A  +   M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C+  V  + +++   +Q   +  A+     +   K   I P+   +N +I  + +
Sbjct: 444 IAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM---KEQGIAPDIFCYNSLIIGLSK 499

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV- 263
              +D A     EM     +P+ +TY   + G  + +    A   + EM+  G  P  V 
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 264 ----------------------------------TFNVLINGLCKNGELGRAAKLVDNMF 289
                                             T+ VL+NGL KN ++  A ++   M 
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            KG  P+  +Y  LI+G    GN+ KA S+ D MV     PN + Y  ++ G  + G   
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               +L  M  +  H N   Y T+I G  K G   +A +L+ +M  KG  P++ VY+ L+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG CR+   + A  I F     GCA++   +++L+   F+ GK     E+   +   +  
Sbjct: 740 DGCCRLNDVERAITI-FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798

Query: 470 Y----NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                N+V Y+++I  LC++G L  A+ ++ QM +    P V+ Y+S+++G    G   E
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM-----MDRGCDPDLV 580
              +F+E   +    +PD   Y++++NA  K+   + ++ L++ M     +D GC   + 
Sbjct: 859 MFPVFDE--AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916

Query: 581 TCNIFLTAL 589
           TC   L+  
Sbjct: 917 TCRALLSGF 925



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 212/410 (51%), Gaps = 15/410 (3%)

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
            ++N   ++G    A   Y  +V+     IL +  T+ +++  + +   VD+A ++FREM
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVD---QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             +   PD+++Y  L++G  K   + +A  + DEM  +G  P  + +N+L+ G C++GE+
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
            +A +L+D M +KG  PN VTY T+I G C  G+L +A  L D M     +P+   Y T+
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME--- 395
           ++G  +L   V+ A  +    ++    +   ++ LI+ +FK GK E   ++  ++M+   
Sbjct: 739 VDGCCRLND-VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797

Query: 396 -KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            +  KPN V Y+ +ID LC+ G  + A+E+  +M N        TY+SL+ G+ + G+  
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-----GCKPDVVA 509
           +   ++ +        + + YSV+I+   ++G   +A ++  QM ++     GCK  +  
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIST 917

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             +++ G    G +E A K+   M+ L+    PD  T   L+N  C  SN
Sbjct: 918 CRALLSGFAKVGEMEVAEKVMENMVRLQ--YIPDSATVIELINESCISSN 965



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/464 (23%), Positives = 194/464 (41%), Gaps = 46/464 (9%)

Query: 172 RALEFYNHIVNAKHMNILPNTL-TFNLVIKTVCRLGLVDNAIQLFREMPVRNC------- 223
           + L F+N + + K   +    L +F+ +   +C  G  + A+ +   M  RN        
Sbjct: 79  KLLSFFNWVDSQK---VTEQKLDSFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWS 135

Query: 224 ------------EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
                         D   +  L DG   +  ++EAV +          P      VL++ 
Sbjct: 136 SIVRCSQEFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDA 195

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG-------------------- 311
           L +   L     +   M  +  + +  TY+ LI   C  G                    
Sbjct: 196 LLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTAT 255

Query: 312 -NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
            N+D A+ L + M+    +P + TY  +I+GL K+ R  D   +L+ M+     ++ + Y
Sbjct: 256 LNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTY 315

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           S LI GL K   A+ A  L  +M+  G      +Y   I  + + G  ++A+ +   MI 
Sbjct: 316 SLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIA 375

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +G    A  Y+SL++G+       +  E+  +M K N V +   Y  ++ G+C  G L  
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +M++ GC+P+VV Y+++I          +A+++  EM   E    PD+F YN L
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM--KEQGIAPDIFCYNSL 493

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
           +  L K   +  +   L  M++ G  P+  T   F++   E  E
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 16/266 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRV--VLEKSFIFIFKAYGKAHL--VEEAIRL 140
           T+ ++I  Y  SGD        +R+  E ++  ++  SF++     G   L  VE AI +
Sbjct: 699 TYCTIIDGYCKSGDLAEA----FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI-LPNTLTFNLVI 199
           F T  ++  C  +   FN+++N + + G      E  N +++        PN +T+N++I
Sbjct: 755 FGT--NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C+ G ++ A +LF +M   N  P + TY +L++G  K  R  E   + DE    G  
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-----GCLPNEVTYNTLIHGLCLKGNLD 314
           P  + ++V+IN   K G   +A  LVD MF K     GC  +  T   L+ G    G ++
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIIN 340
            A  +++ MV  + +P+  T   +IN
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELIN 958


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 149/525 (28%), Positives = 256/525 (48%), Gaps = 30/525 (5%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +AHLV      F  M+    C   V SFN +++V+  +G   +A+   N +   +    +
Sbjct: 155 RAHLVWX---FFKQMLTSRVCP-NVSSFNILISVLCVQGKLKKAV---NILTMMERNGYV 207

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +++N ++   C+ G    A+ L   M  +  + D+ TY   +D LC+ +R  +  L+
Sbjct: 208 PTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLV 267

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +M+     P  V++N LING  K G++G A ++ + M      PN +TYN LI+G C+
Sbjct: 268 LKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCI 327

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            GN ++A+ LLD M A+   PNEVT GT++NGL K  +      +L      +  +N   
Sbjct: 328 NGNFEEALRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCIS 387

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ +I GL + G  ++A +L  +M + G  P+ + +S LI+G C+VG  ++A+E++ ++ 
Sbjct: 388 HTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIY 447

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   N   +S+L+    + G  ++ ++ +  M  N    +    + L+  LCE+GKL 
Sbjct: 448 REGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLV 507

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA      +   G  P+ V +  +I+G  N G    A  +F++M  +     P  FTY  
Sbjct: 508 EAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKM--ISCGHHPSPFTYGS 565

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           LL  LCK  N   +  LL  +       D ++ N  +      +E  + G   L E A+R
Sbjct: 566 LLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLI------VEISKSGN--LLE-AVR 616

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           LF            E M+Q  + P + T+  ++  L R  R+  A
Sbjct: 617 LF------------EEMIQNNILPDSYTYTCILSGLIREGRLVCA 649



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 226/479 (47%), Gaps = 18/479 (3%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N   F+L+I+   R G+V +A+  F  M +R  +P +YT   +M  + K  R        
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFF 163

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M      P   +FN+LI+ LC  G+L +A  ++  M   G +P  V+YNTL+   C K
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G    A+ L+  M       +  TY   I+ L +  R+  G  VL  M  +    NE  Y
Sbjct: 224 GRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSY 283

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI+G  KEGK   A +++ +M+E    PN + Y+ LI+G C  G  +EA  +L  M  
Sbjct: 284 NTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEA 343

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           N    N  T  +L+ G ++S K   A  I +  + N    N + ++V+I GLC +G L E
Sbjct: 344 NDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDE 403

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +M   G  PD++ +S +I+G C  G++ +A ++ +++        P+   ++ L
Sbjct: 404 AFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKI--YREGFVPNNVIFSTL 461

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA-IR 609
           +   CK  N+   +    +M   G + D  TCN  + +L E  +  +   +FL+ ++ I 
Sbjct: 462 IYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVE-AEEFLHHISRIG 520

Query: 610 LFKRQRT--------------SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           L     T              SG F + + M+     P   T+  +++ LC+ +    A
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEA 579



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 131/553 (23%), Positives = 255/553 (46%), Gaps = 28/553 (5%)

Query: 104 MVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
           +VL +MR +     E S+  +   + K   +  A R+F+ M+ E +    + ++N ++N 
Sbjct: 266 LVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMI-ELNLSPNLITYNILING 324

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
               G +  AL   + ++ A   ++ PN +T   ++  + +    D A  +     +   
Sbjct: 325 YCINGNFEEALRLLD-VMEAN--DVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRT 381

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
             +  ++  ++DGLC+   LDEA  LL EM  DG +P  +TF+VLING CK G L +A +
Sbjct: 382 SLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKE 441

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           ++  ++ +G +PN V ++TLI+  C  GN+ + +     M  +    +  T  +++  L 
Sbjct: 442 VMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLC 501

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           + G+ V+    L  +       N   +  +I+G    G    A  ++ +M+  G  P+  
Sbjct: 502 ENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPF 561

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y +L+  LC+     EA ++L ++     A +  +Y++L+    +SG   +AV ++++M
Sbjct: 562 TYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEM 621

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP-DVVAYSSMIHGLCNAGS 522
            +NN + +   Y+ ++ GL  +G+L  A +   +++ +     + + Y+  I GL  AG 
Sbjct: 622 IQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQ 681

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
            + AL LF EM   E     D+   N + +   +   +  +  L++   ++   P+L T 
Sbjct: 682 SKAALYLFKEM--EEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTF 739

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           NI        L     G D ++    +L+   R SG F            P   T+  ++
Sbjct: 740 NIL-------LHGYSRGQDIMS--CFKLYNLMRRSGFF------------PNRLTYHSLI 778

Query: 643 QELCRPKRIQAAI 655
             LC    ++  I
Sbjct: 779 LGLCNHGMLELGI 791



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 242/530 (45%), Gaps = 42/530 (7%)

Query: 133 LVEEAIRLFHTMVDEFHCKRTVK----SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           L++EA +L   M     CK  V     +F+ ++N   + G  ++A E  + I        
Sbjct: 400 LLDEAFQLLIEM-----CKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYRE---GF 451

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +PN + F+ +I   C++G V   ++ +  M +     D +T  +L+  LC+  +L EA  
Sbjct: 452 VPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEE 511

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
            L  +   G  P  VTF+ +ING    G+   A  + D M   G  P+  TY +L+  LC
Sbjct: 512 FLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLC 571

Query: 309 LKGNLDKAVSLLDRMVASKCMP---NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
              N  +A  LL ++    C+P   + ++Y T+I  + K G  ++  R+   M +     
Sbjct: 572 KGQNFWEARKLLKKL---HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILP 628

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP-NTVVYSALIDGLCRVGKPDEAEEI 424
           + Y Y+ ++SGL +EG+   A     ++M+K     N++VY+  IDGL + G+   A  +
Sbjct: 629 DSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYL 688

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
             EM   G + +    +S+  G+   GK   A  +       N + N   +++L+HG   
Sbjct: 689 FKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSR 748

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
              +     ++  M   G  P+ + Y S+I GLCN G +E  +K+    + +   S  D 
Sbjct: 749 GQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK--MFIAESSTIDD 806

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            T+N+L+   C+ +++   IDL ++M             +F  +L +  +  +  TD   
Sbjct: 807 LTFNMLIRKCCEINDLDKVIDLTHNM------------EVFRVSLDK--DTQKAVTDV-- 850

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                L +R  +   F  +  ML+K   P +  +  +++ +CR   IQ A
Sbjct: 851 -----LVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 121/546 (22%), Positives = 246/546 (45%), Gaps = 26/546 (4%)

Query: 67   DEIFNSTPKLGSYQLGDSTFYSLIQ--HYANSGDFKSLEMVLYRMRR--EKRVVLEK--- 119
            D I N    +G      S F  +I   H+ +   + SL  VL + +   E R +L+K   
Sbjct: 529  DCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHC 588

Query: 120  --------SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
                    S+  +     K+  + EA+RLF  M+   +      ++  +L+ +I+EG   
Sbjct: 589  IPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQN-NILPDSYTYTCILSGLIREGRLV 647

Query: 172  RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
             A  F   ++  + + +  N++ +   I  + + G    A+ LF+EM  +    D+    
Sbjct: 648  CAFIFLGRLMQKEILTL--NSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALN 705

Query: 232  TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            ++ DG  +  ++  A  L+ + +     P   TFN+L++G  +  ++    KL + M   
Sbjct: 706  SITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRS 765

Query: 292  GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
            G  PN +TY++LI GLC  G L+  + +L   +A     +++T+  +I    ++      
Sbjct: 766  GFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKV 825

Query: 352  ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
              +  +ME  +  +++     +   L +   +++      +M++KG  P +  Y  ++  
Sbjct: 826  IDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKR 885

Query: 412  LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            +CRVG    A ++  +M+  G + +     ++++G    GK  +A+ I + M +   +  
Sbjct: 886  MCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPT 945

Query: 472  EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
               ++ L+H  C+    +EA  +   M     K D+VAY+ +I   C  G V  AL  + 
Sbjct: 946  TSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYE 1005

Query: 532  EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV------TCNIF 585
            E+   +    P++ TY +L++A+  +  +S    +L  + DRG     +      +C  F
Sbjct: 1006 EI--KQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGKSQKSCRDF 1063

Query: 586  LTALKE 591
            + A+K+
Sbjct: 1064 VVAIKK 1069



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/562 (21%), Positives = 228/562 (40%), Gaps = 48/562 (8%)

Query: 70   FNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG 129
            F +   L      + T  SL+     +G     E  L+ + R   V    +F  I   Y 
Sbjct: 477  FYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYA 536

Query: 130  KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
                   A  +F  M+   H   +  ++ S+L V+ +   +  A +        K ++ +
Sbjct: 537  NVGDGSGAFSVFDKMISCGH-HPSPFTYGSLLKVLCKGQNFWEARKLL------KKLHCI 589

Query: 190  P---NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            P   +T+++N +I  + + G +  A++LF EM   N  PD YTY  ++ GL +E RL  A
Sbjct: 590  PLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCA 649

Query: 247  VLLLDE-MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
             + L   MQ +      + +   I+GL K G+   A  L   M  KG   + +  N++  
Sbjct: 650  FIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITD 709

Query: 306  GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
            G    G +  A SL+ +      +PN  T+  +++G  +    +   ++   M    F  
Sbjct: 710  GYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFP 769

Query: 366  NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI- 424
            N   Y +LI GL   G  E  +K+ K  + +    + + ++ LI   C +   D+  ++ 
Sbjct: 770  NRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLT 829

Query: 425  ----------------------------------LFEMINNGCAANAFTYSSLMKGFFES 450
                                              + EM+  G    +  Y ++MK     
Sbjct: 830  HNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRV 889

Query: 451  GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            G    A ++   M       ++     ++ GL   GK+ EA  +  +ML     P    +
Sbjct: 890  GDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTF 949

Query: 511  SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
            ++++H  C   + +EA  L  ++L    + + D+  YN+L++A C   ++  ++D    +
Sbjct: 950  TTLMHVFCKKDNFKEAHNL--KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEI 1007

Query: 571  MDRGCDPDLVTCNIFLTALKEK 592
              +G  P++ T  + ++A+  K
Sbjct: 1008 KQKGLLPNMTTYRVLVSAISTK 1029



 Score = 43.1 bits (100), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 23/117 (19%)

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
           S P VF  ++L+    +Q  + H+++  +SM+ RG  P + TCN+ + ++ +   A    
Sbjct: 103 SNPAVF--DLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRA---- 156

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                 L    FK+            ML   + P  S++  ++  LC   +++ A+N
Sbjct: 157 -----HLVWXFFKQ------------MLTSRVCPNVSSFNILISVLCVQGKLKKAVN 196


>gi|15241491|ref|NP_196981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|9755745|emb|CAC01876.1| putative protein [Arabidopsis thaliana]
 gi|332004692|gb|AED92075.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 938

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/466 (31%), Positives = 239/466 (51%), Gaps = 21/466 (4%)

Query: 141 FHTMVDEFHCK-----------RTVKSFNSVLNVIIQEGLY--HRALEFYNHIVNAKHMN 187
           ++T++D F CK             +   N + + I+    Y  H   E Y  +V +    
Sbjct: 199 YNTLIDGF-CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMS---G 254

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             P+ +TF+ +I  +C+ G V     L REM   +  P+  TY TL+D L K N    A+
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 314

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L  +M V G     V + VL++GL K G+L  A K    +     +PN VTY  L+ GL
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G+L  A  ++ +M+    +PN VTY ++ING VK G   +   +L  ME++    N 
Sbjct: 375 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 434

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + Y T+I GLFK GK E A++L K+M   G + N  +  AL++ L R+G+  E + ++ +
Sbjct: 435 FTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKD 494

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M++ G   +   Y+SL+  FF+ G    A+   ++M +    ++ V Y+VLI G+ + GK
Sbjct: 495 MVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK 554

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A   +  M  +G +PD+  ++ M++     G  E  LKL+++M     K  P + + 
Sbjct: 555 V-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK--PSLMSC 611

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL-TALKEK 592
           NI++  LC+   +  +I +LN MM     P+L T  IFL T+ K K
Sbjct: 612 NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 272/620 (43%), Gaps = 103/620 (16%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            +  +Y   H +EEA R    ++  F     V +F+S++N + + G   + LE    +  
Sbjct: 232 ILLSSYYNLHAIEEAYR--DMVMSGFDPD--VVTFSSIINRLCKGG---KVLEGGLLLRE 284

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            + M++ PN +T+  ++ ++ +  +  +A+ L+ +M VR    D+  Y  LMDGL K   
Sbjct: 285 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 344

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L EA      +  D   P  VT+  L++GLCK G+L  A  ++  M  K  +PN VTY++
Sbjct: 345 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 404

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I+G   KG L++AVSLL +M     +PN  TYGT+I+GL K G+  +   + +S E R 
Sbjct: 405 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK--EEMAIELSKEMRL 462

Query: 363 FHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
             V  N YI   L++ L + G+ ++   L K M+ KG   + + Y++LID   + G  + 
Sbjct: 463 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEA 522

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGK--------GHKAVEIWKDMAKNNCVYNE 472
           A     EM   G   +  +Y+ L+ G  + GK        G +   I  D+A  N + N 
Sbjct: 523 ALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNS 582

Query: 473 --------------------------VCYSVLIHGLCEDGKLREARMVWTQM-------- 498
                                     +  ++++  LCE+GK+ EA  +  QM        
Sbjct: 583 QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPN 642

Query: 499 ---------------------------LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
                                      LS G K     Y+++I  LC  G  ++A  +  
Sbjct: 643 LTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMG 702

Query: 532 EMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI------ 584
           +M   E +   PD  T+N L++     S++  ++   + MM+ G  P++ T N       
Sbjct: 703 DM---EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 759

Query: 585 ----------FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
                     +L+ +K +   P D T   N L     K     G   I   M+   L P+
Sbjct: 760 DAGLIKEVDKWLSEMKSRGMRPDDFT--YNALISGQAKIGNMKGSMTIYCEMIADGLVPK 817

Query: 635 TSTWERVVQELCR-PKRIQA 653
           TST+  ++ E     K +QA
Sbjct: 818 TSTYNVLISEFANVGKMLQA 837



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 205/424 (48%), Gaps = 38/424 (8%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQL-FREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           ++P++  +N +I      GLV + + L + +M      PD++    L+   CK  RL  A
Sbjct: 89  VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 148

Query: 247 VLLLDE--MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           + LL    + +D      VT+N +I+GLC++G    A + +  M   G LP+ V+YNTLI
Sbjct: 149 ISLLRNRVISID-----TVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 203

Query: 305 HGLCLKGNLDKAVSLLDR----------------------------MVASKCMPNEVTYG 336
            G C  GN  +A +L+D                             MV S   P+ VT+ 
Sbjct: 204 DGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFS 263

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           +IIN L K G+ ++G  +L  MEE   + N   Y+TL+  LFK      A+ L+ QM+ +
Sbjct: 264 SIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR 323

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G   + VVY+ L+DGL + G   EAE+    ++ +    N  TY++L+ G  ++G    A
Sbjct: 324 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 383

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
             I   M + + + N V YS +I+G  + G L EA  +  +M  +   P+   Y ++I G
Sbjct: 384 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 443

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           L  AG  E A++L  EM  +    + + +  + L+N L +   I     L+  M+ +G  
Sbjct: 444 LFKAGKEEMAIELSKEMRLI--GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 501

Query: 577 PDLV 580
            D +
Sbjct: 502 LDQI 505



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 254/537 (47%), Gaps = 31/537 (5%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  + EA + F  ++++      V ++ ++++ + + G    A EF   I      +++
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVV-TYTALVDGLCKAGDLSSA-EFI--ITQMLEKSVI 396

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T++ +I    + G+++ A+ L R+M  +N  P+ +TY T++DGL K  + + A+ L
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM++ G        + L+N L + G +     LV +M  KG   +++ Y +LI  +  
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID-VFF 515

Query: 310 KGNLDKAVSLLDRMVASKCMP-NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           KG  ++A       +  + MP + V+Y  +I+G++K G+ V        M E+    +  
Sbjct: 516 KGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREKGIEPDIA 574

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ +++   K+G +E  +KLW +M   G KP+ +  + ++  LC  GK +EA  IL +M
Sbjct: 575 TFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQM 634

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHK-AVEIWKD---MAKNNCVYNEVCYSVLIHGLCE 484
           +      N  TY    + F ++   HK A  I+K    +       +   Y+ LI  LC+
Sbjct: 635 MLMEIHPNLTTY----RIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 690

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G  ++A MV   M +RG  PD V ++S++HG      V +AL  ++ M+  E    P+V
Sbjct: 691 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM--EAGISPNV 748

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            TYN ++  L     I      L+ M  RG  PD  T N  ++   +        T +  
Sbjct: 749 ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCE 808

Query: 605 ELAIRLFKRQRTS----GGFKIVEVMLQ----------KFLSPQTSTWERVVQELCR 647
            +A  L  +  T       F  V  MLQ          + +SP TST+  ++  LC+
Sbjct: 809 MIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 239/507 (47%), Gaps = 11/507 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+     +GD  S E ++ +M  +  +    ++  +   Y K  ++EEA+ L   M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D+        ++ +V++ + + G    A+E    +   + + +  N    + ++  + R
Sbjct: 426 EDQNVVPNGF-TYGTVIDGLFKAGKEEMAIELSKEM---RLIGVEENNYILDALVNHLKR 481

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G +     L ++M  +    D   Y +L+D   K    + A+   +EMQ  G     V+
Sbjct: 482 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 541

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NVLI+G+ K G++G A      M  KG  P+  T+N +++    +G+ +  + L D+M 
Sbjct: 542 YNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    P+ ++   ++  L + G+  +   +L  M   + H N   Y   +    K  +A+
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 660

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
              K  + ++  G K +  VY+ LI  LC++G   +A  ++ +M   G   +  T++SLM
Sbjct: 661 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLM 720

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+F      KA+  +  M +     N   Y+ +I GL + G ++E     ++M SRG +
Sbjct: 721 HGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMR 780

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKSQPDVFTYNILLNALCKQSNISH 562
           PD   Y+++I G    G+++ ++ ++ EM+   L PK+     TYN+L++       +  
Sbjct: 781 PDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS----TYNVLISEFANVGKMLQ 836

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + +LL  M  RG  P+  T    ++ L
Sbjct: 837 ARELLKEMGKRGVSPNTSTYCTMISGL 863



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 162/330 (49%), Gaps = 34/330 (10%)

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL-DRMVASKCMPNEVTYGTII 339
           AA+ +  M   G +P+   +N+LIH   + G +   VSL+  +M+A    P+      +I
Sbjct: 77  AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +   K+GR      +L     R   ++   Y+T+ISGL + G A++A +   +M++ G  
Sbjct: 137 HSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193

Query: 400 PNTVVYSALIDGLCRVGKPDEA----------------------------EEILFEMINN 431
           P+TV Y+ LIDG C+VG    A                            EE   +M+ +
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMS 253

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  T+SS++    + GK  +   + ++M + +   N V Y+ L+  L +    R A
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +++QM+ RG   D+V Y+ ++ GL  AG + EA K F   + LE    P+V TY  L+
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK--MLLEDNQVPNVVTYTALV 371

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           + LCK  ++S +  ++  M+++   P++VT
Sbjct: 372 DGLCKAGDLSSAEFIITQMLEKSVIPNVVT 401



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 50/323 (15%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + +FN ++N   ++G     L+ ++ +   K   I P+ ++ N+V+  +C  G ++ AI 
Sbjct: 573 IATFNIMMNSQRKQGDSEGILKLWDKM---KSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  +M +    P++ TY   +D   K  R D      + +   G   +   +N LI  LC
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G   +AA ++ +M  +G +P+ VT+N+L+HG  +  ++ KA+S    M+ +   PN  
Sbjct: 690 KLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVA 749

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW--- 390
           TY TII GL   G   +  + L  M+ R    +++ Y+ LISG  K G  + +M ++   
Sbjct: 750 TYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM 809

Query: 391 --------------------------------KQMMEKGCKPNTVVYSALIDGLCRV-GK 417
                                           K+M ++G  PNT  Y  +I GLC++   
Sbjct: 810 IADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTH 869

Query: 418 PD-----------EAEEILFEMI 429
           PD           EA+ +L EM+
Sbjct: 870 PDVEWNKKAMYLAEAKGLLKEMV 892



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 20/288 (6%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           IF      H   +AI   H  +  +  K + + +N+++  + + G+  +A        + 
Sbjct: 648 IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMG---DM 704

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +    +P+T+TFN ++        V  A+  +  M      P++ TY T++ GL     +
Sbjct: 705 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 764

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            E    L EM+  G  P   T+N LI+G  K G +  +  +   M   G +P   TYN L
Sbjct: 765 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 824

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD------------G 351
           I      G + +A  LL  M      PN  TY T+I+GL KL    D             
Sbjct: 825 ISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEA 884

Query: 352 ARVLMSMEERKFHV--NEYIYSTLISGLF-KEGKAEDAMKLWKQMMEK 396
             +L  M E K ++  N+ IY   IS  F K G   DA +  K+  +K
Sbjct: 885 KGLLKEMVEEKGYIPCNQTIY--WISAAFSKPGMKVDAERFLKECYKK 930



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 11/119 (9%)

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           ++N + +   ++GL  D    +  +++++M++ G  PDV A + +IH  C  G +  A+ 
Sbjct: 95  LWNSLIHQFNVNGLVHD----QVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150

Query: 529 LF-NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L  N ++ +      D  TYN +++ LC+      +   L+ M+  G  PD V+ N  +
Sbjct: 151 LLRNRVISI------DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 203


>gi|223635763|sp|Q9LER0.2|PP381_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g14770, mitochondrial; Flags: Precursor
          Length = 940

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 147/466 (31%), Positives = 239/466 (51%), Gaps = 21/466 (4%)

Query: 141 FHTMVDEFHCK-----------RTVKSFNSVLNVIIQEGLY--HRALEFYNHIVNAKHMN 187
           ++T++D F CK             +   N + + I+    Y  H   E Y  +V +    
Sbjct: 201 YNTLIDGF-CKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMS---G 256

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
             P+ +TF+ +I  +C+ G V     L REM   +  P+  TY TL+D L K N    A+
Sbjct: 257 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 316

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L  +M V G     V + VL++GL K G+L  A K    +     +PN VTY  L+ GL
Sbjct: 317 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 376

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G+L  A  ++ +M+    +PN VTY ++ING VK G   +   +L  ME++    N 
Sbjct: 377 CKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNG 436

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + Y T+I GLFK GK E A++L K+M   G + N  +  AL++ L R+G+  E + ++ +
Sbjct: 437 FTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKD 496

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M++ G   +   Y+SL+  FF+ G    A+   ++M +    ++ V Y+VLI G+ + GK
Sbjct: 497 MVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK 556

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A   +  M  +G +PD+  ++ M++     G  E  LKL+++M     K  P + + 
Sbjct: 557 V-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIK--PSLMSC 613

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL-TALKEK 592
           NI++  LC+   +  +I +LN MM     P+L T  IFL T+ K K
Sbjct: 614 NIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 659



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 163/620 (26%), Positives = 272/620 (43%), Gaps = 103/620 (16%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            +  +Y   H +EEA R    ++  F     V +F+S++N + + G   + LE    +  
Sbjct: 234 ILLSSYYNLHAIEEAYR--DMVMSGFDPD--VVTFSSIINRLCKGG---KVLEGGLLLRE 286

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            + M++ PN +T+  ++ ++ +  +  +A+ L+ +M VR    D+  Y  LMDGL K   
Sbjct: 287 MEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGD 346

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L EA      +  D   P  VT+  L++GLCK G+L  A  ++  M  K  +PN VTY++
Sbjct: 347 LREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSS 406

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I+G   KG L++AVSLL +M     +PN  TYGT+I+GL K G+  +   + +S E R 
Sbjct: 407 MINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK--EEMAIELSKEMRL 464

Query: 363 FHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
             V  N YI   L++ L + G+ ++   L K M+ KG   + + Y++LID   + G  + 
Sbjct: 465 IGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEA 524

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGK--------GHKAVEIWKDMAKNNCVYNE 472
           A     EM   G   +  +Y+ L+ G  + GK        G +   I  D+A  N + N 
Sbjct: 525 ALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNS 584

Query: 473 --------------------------VCYSVLIHGLCEDGKLREARMVWTQM-------- 498
                                     +  ++++  LCE+GK+ EA  +  QM        
Sbjct: 585 QRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPN 644

Query: 499 ---------------------------LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
                                      LS G K     Y+++I  LC  G  ++A  +  
Sbjct: 645 LTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMG 704

Query: 532 EMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI------ 584
           +M   E +   PD  T+N L++     S++  ++   + MM+ G  P++ T N       
Sbjct: 705 DM---EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS 761

Query: 585 ----------FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
                     +L+ +K +   P D T   N L     K     G   I   M+   L P+
Sbjct: 762 DAGLIKEVDKWLSEMKSRGMRPDDFT--YNALISGQAKIGNMKGSMTIYCEMIADGLVPK 819

Query: 635 TSTWERVVQELCR-PKRIQA 653
           TST+  ++ E     K +QA
Sbjct: 820 TSTYNVLISEFANVGKMLQA 839



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 205/424 (48%), Gaps = 38/424 (8%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQL-FREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           ++P++  +N +I      GLV + + L + +M      PD++    L+   CK  RL  A
Sbjct: 91  VVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFA 150

Query: 247 VLLLDE--MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           + LL    + +D      VT+N +I+GLC++G    A + +  M   G LP+ V+YNTLI
Sbjct: 151 ISLLRNRVISID-----TVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 205

Query: 305 HGLCLKGNLDKAVSLLDR----------------------------MVASKCMPNEVTYG 336
            G C  GN  +A +L+D                             MV S   P+ VT+ 
Sbjct: 206 DGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFS 265

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           +IIN L K G+ ++G  +L  MEE   + N   Y+TL+  LFK      A+ L+ QM+ +
Sbjct: 266 SIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVR 325

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G   + VVY+ L+DGL + G   EAE+    ++ +    N  TY++L+ G  ++G    A
Sbjct: 326 GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSA 385

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
             I   M + + + N V YS +I+G  + G L EA  +  +M  +   P+   Y ++I G
Sbjct: 386 EFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDG 445

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           L  AG  E A++L  EM  +    + + +  + L+N L +   I     L+  M+ +G  
Sbjct: 446 LFKAGKEEMAIELSKEMRLI--GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVT 503

Query: 577 PDLV 580
            D +
Sbjct: 504 LDQI 507



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 254/537 (47%), Gaps = 31/537 (5%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  + EA + F  ++++      V ++ ++++ + + G    A EF   I      +++
Sbjct: 343 KAGDLREAEKTFKMLLEDNQVPNVV-TYTALVDGLCKAGDLSSA-EFI--ITQMLEKSVI 398

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T++ +I    + G+++ A+ L R+M  +N  P+ +TY T++DGL K  + + A+ L
Sbjct: 399 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 458

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
             EM++ G        + L+N L + G +     LV +M  KG   +++ Y +LI  +  
Sbjct: 459 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLID-VFF 517

Query: 310 KGNLDKAVSLLDRMVASKCMP-NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           KG  ++A       +  + MP + V+Y  +I+G++K G+ V        M E+    +  
Sbjct: 518 KGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGK-VGADWAYKGMREKGIEPDIA 576

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ +++   K+G +E  +KLW +M   G KP+ +  + ++  LC  GK +EA  IL +M
Sbjct: 577 TFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQM 636

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHK-AVEIWKD---MAKNNCVYNEVCYSVLIHGLCE 484
           +      N  TY    + F ++   HK A  I+K    +       +   Y+ LI  LC+
Sbjct: 637 MLMEIHPNLTTY----RIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCK 692

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G  ++A MV   M +RG  PD V ++S++HG      V +AL  ++ M+  E    P+V
Sbjct: 693 LGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMM--EAGISPNV 750

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            TYN ++  L     I      L+ M  RG  PD  T N  ++   +        T +  
Sbjct: 751 ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCE 810

Query: 605 ELAIRLFKRQRTS----GGFKIVEVMLQ----------KFLSPQTSTWERVVQELCR 647
            +A  L  +  T       F  V  MLQ          + +SP TST+  ++  LC+
Sbjct: 811 MIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 867



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/507 (23%), Positives = 239/507 (47%), Gaps = 11/507 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+     +GD  S E ++ +M  +  +    ++  +   Y K  ++EEA+ L   M
Sbjct: 368 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 427

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D+        ++ +V++ + + G    A+E    +   + + +  N    + ++  + R
Sbjct: 428 EDQNVVPNGF-TYGTVIDGLFKAGKEEMAIELSKEM---RLIGVEENNYILDALVNHLKR 483

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G +     L ++M  +    D   Y +L+D   K    + A+   +EMQ  G     V+
Sbjct: 484 IGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVS 543

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NVLI+G+ K G++G A      M  KG  P+  T+N +++    +G+ +  + L D+M 
Sbjct: 544 YNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 602

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +    P+ ++   ++  L + G+  +   +L  M   + H N   Y   +    K  +A+
Sbjct: 603 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRAD 662

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
              K  + ++  G K +  VY+ LI  LC++G   +A  ++ +M   G   +  T++SLM
Sbjct: 663 AIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLM 722

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+F      KA+  +  M +     N   Y+ +I GL + G ++E     ++M SRG +
Sbjct: 723 HGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMR 782

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKSQPDVFTYNILLNALCKQSNISH 562
           PD   Y+++I G    G+++ ++ ++ EM+   L PK+     TYN+L++       +  
Sbjct: 783 PDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS----TYNVLISEFANVGKMLQ 838

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + +LL  M  RG  P+  T    ++ L
Sbjct: 839 ARELLKEMGKRGVSPNTSTYCTMISGL 865



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 162/330 (49%), Gaps = 34/330 (10%)

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL-DRMVASKCMPNEVTYGTII 339
           AA+ +  M   G +P+   +N+LIH   + G +   VSL+  +M+A    P+      +I
Sbjct: 79  AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 138

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +   K+GR      +L     R   ++   Y+T+ISGL + G A++A +   +M++ G  
Sbjct: 139 HSFCKVGRLSFAISLL---RNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 195

Query: 400 PNTVVYSALIDGLCRVGKPDEA----------------------------EEILFEMINN 431
           P+TV Y+ LIDG C+VG    A                            EE   +M+ +
Sbjct: 196 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMS 255

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  T+SS++    + GK  +   + ++M + +   N V Y+ L+  L +    R A
Sbjct: 256 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 315

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +++QM+ RG   D+V Y+ ++ GL  AG + EA K F   + LE    P+V TY  L+
Sbjct: 316 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFK--MLLEDNQVPNVVTYTALV 373

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           + LCK  ++S +  ++  M+++   P++VT
Sbjct: 374 DGLCKAGDLSSAEFIITQMLEKSVIPNVVT 403



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 148/323 (45%), Gaps = 50/323 (15%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           + +FN ++N   ++G     L+ ++ +   K   I P+ ++ N+V+  +C  G ++ AI 
Sbjct: 575 IATFNIMMNSQRKQGDSEGILKLWDKM---KSCGIKPSLMSCNIVVGMLCENGKMEEAIH 631

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  +M +    P++ TY   +D   K  R D      + +   G   +   +N LI  LC
Sbjct: 632 ILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 691

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G   +AA ++ +M  +G +P+ VT+N+L+HG  +  ++ KA+S    M+ +   PN  
Sbjct: 692 KLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVA 751

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW--- 390
           TY TII GL   G   +  + L  M+ R    +++ Y+ LISG  K G  + +M ++   
Sbjct: 752 TYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEM 811

Query: 391 --------------------------------KQMMEKGCKPNTVVYSALIDGLCRV-GK 417
                                           K+M ++G  PNT  Y  +I GLC++   
Sbjct: 812 IADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTH 871

Query: 418 PD-----------EAEEILFEMI 429
           PD           EA+ +L EM+
Sbjct: 872 PDVEWNKKAMYLAEAKGLLKEMV 894



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 20/288 (6%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           IF      H   +AI   H  +  +  K + + +N+++  + + G+  +A        + 
Sbjct: 650 IFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMG---DM 706

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           +    +P+T+TFN ++        V  A+  +  M      P++ TY T++ GL     +
Sbjct: 707 EARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLI 766

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            E    L EM+  G  P   T+N LI+G  K G +  +  +   M   G +P   TYN L
Sbjct: 767 KEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVL 826

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD------------G 351
           I      G + +A  LL  M      PN  TY T+I+GL KL    D             
Sbjct: 827 ISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEA 886

Query: 352 ARVLMSMEERKFHV--NEYIYSTLISGLF-KEGKAEDAMKLWKQMMEK 396
             +L  M E K ++  N+ IY   IS  F K G   DA +  K+  +K
Sbjct: 887 KGLLKEMVEEKGYIPCNQTIY--WISAAFSKPGMKVDAERFLKECYKK 932



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 60/119 (50%), Gaps = 11/119 (9%)

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           ++N + +   ++GL  D    +  +++++M++ G  PDV A + +IH  C  G +  A+ 
Sbjct: 97  LWNSLIHQFNVNGLVHD----QVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 152

Query: 529 LF-NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L  N ++ +      D  TYN +++ LC+      +   L+ M+  G  PD V+ N  +
Sbjct: 153 LLRNRVISI------DTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLI 205


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/492 (27%), Positives = 235/492 (47%), Gaps = 23/492 (4%)

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
           V+ +EG+  +A   ++ ++ +    ++P    +  +I+  CR   V    +L  EM  RN
Sbjct: 356 VMSKEGVMEKAKALFDGMIAS---GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
                YTY T++ G+C    LD A  ++ EM   GC P  V +  LI    +N   G A 
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +++  M  +G  P+   YN+LI GL     +D+A S L  MV +   PN  TYG  I+G 
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
           ++        + +  M E     N+ + + LI+   K+GK  +A   ++ M+++G   + 
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
             Y+ L++GL +  K D+AEEI  EM   G A + F+Y  L+ GF + G   KA  I+ +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +     N + Y++L+ G C  G++ +A+ +  +M  +G  P+ V Y ++I G C +G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           + EA +LF+EM        PD F Y  L++  C+ +++  +I +  +   +GC       
Sbjct: 713 LAEAFRLFDEMKL--KGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPF 769

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           N  +  +  K    +  T+ LN L    F R                F  P   T+  ++
Sbjct: 770 NALINWVF-KFGKTELKTEVLNRLMDGSFDR----------------FGKPNDVTYNIMI 812

Query: 643 QELCRPKRIQAA 654
             LC+   ++AA
Sbjct: 813 DYLCKEGNLEAA 824



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 239/493 (48%), Gaps = 20/493 (4%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           ++P   T++++I  +C++  +++A  L  EM       D +TY  L+DGL K    D A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+ EM   G    P  ++  I  + K G + +A  L D M   G +P    Y +LI G 
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFHVN 366
           C + N+ +   LL  M     + +  TYGT++ G+   G  +DGA  ++  M       N
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD-LDGAYNIVKEMIASGCRPN 451

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             IY+TLI    +  +  DAM++ K+M E+G  P+   Y++LI GL +  + DEA   L 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM+ NG   NAFTY + + G+ E+ +   A +  K+M +   + N+V  + LI+  C+ G
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ EA   +  M+ +G   D   Y+ +++GL     V++A ++F EM        PDVF+
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM--RGKGIAPDVFS 629

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           Y +L+N   K  N+  +  + + M++ G  P+++  N+ L       E  +   + L+E+
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI-EKAKELLDEM 688

Query: 607 AIRLF---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           +++                 K    +  F++ + M  K L P +  +  +V   CR   +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 652 QAAINKCWSNLYG 664
           + AI    +N  G
Sbjct: 749 ERAITIFGTNKKG 761



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 201/441 (45%), Gaps = 36/441 (8%)

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           Y  +V  K  NI+ +  T+  V+K +C  G +D A  + +EM    C P++  Y TL+  
Sbjct: 402 YELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
             + +R  +A+ +L EM+  G  P    +N LI GL K   +  A   +  M   G  PN
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
             TY   I G         A   +  M     +PN+V    +IN   K G+ ++      
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR 581

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
           SM ++    +   Y+ L++GLFK  K +DA +++++M  KG  P+   Y  LI+G  ++G
Sbjct: 582 SMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLG 641

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
              +A  I  EM+  G   N   Y+ L+ GF  SG+  KA E+  +M+      N V Y 
Sbjct: 642 NMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYC 701

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF--NEML 534
            +I G C+ G L EA  ++ +M  +G  PD   Y++++ G C    VE A+ +F  N+  
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKG 761

Query: 535 CLEPKS----------------------------------QPDVFTYNILLNALCKQSNI 560
           C    +                                  +P+  TYNI+++ LCK+ N+
Sbjct: 762 CASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL 821

Query: 561 SHSIDLLNSMMDRGCDPDLVT 581
             + +L + M +    P ++T
Sbjct: 822 EAAKELFHQMQNANLMPTVIT 842



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 240/549 (43%), Gaps = 51/549 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI+ Y    + +    +L  M++   V+   ++  + K    +  ++ A  +   M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C+  V  + +++   +Q   +  A+     +   K   I P+   +N +I  + +
Sbjct: 444 IAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM---KEQGIAPDIFCYNSLIIGLSK 499

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV- 263
              +D A     EM     +P+ +TY   + G  + +    A   + EM+  G  P  V 
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 264 ----------------------------------TFNVLINGLCKNGELGRAAKLVDNMF 289
                                             T+ VL+NGL KN ++  A ++   M 
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            KG  P+  +Y  LI+G    GN+ KA S+ D MV     PN + Y  ++ G  + G   
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               +L  M  +  H N   Y T+I G  K G   +A +L+ +M  KG  P++ VY+ L+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG CR+   + A  I F     GCA++   +++L+   F+ GK     E+   +   +  
Sbjct: 740 DGCCRLNDVERAITI-FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798

Query: 470 Y----NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                N+V Y+++I  LC++G L  A+ ++ QM +    P V+ Y+S+++G    G   E
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM-----MDRGCDPDLV 580
              +F+E   +    +PD   Y++++NA  K+   + ++ L++ M     +D GC   + 
Sbjct: 859 MFPVFDE--AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916

Query: 581 TCNIFLTAL 589
           TC   L+  
Sbjct: 917 TCRALLSGF 925



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 212/410 (51%), Gaps = 15/410 (3%)

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
            ++N   ++G    A   Y  +V+     IL +  T+ +++  + +   VD+A ++FREM
Sbjct: 562 GLINEYCKKGKVIEACSAYRSMVD---QGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             +   PD+++Y  L++G  K   + +A  + DEM  +G  P  + +N+L+ G C++GE+
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
            +A +L+D M +KG  PN VTY T+I G C  G+L +A  L D M     +P+   Y T+
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME--- 395
           ++G  +L   V+ A  +    ++    +   ++ LI+ +FK GK E   ++  ++M+   
Sbjct: 739 VDGCCRLND-VERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797

Query: 396 -KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            +  KPN V Y+ +ID LC+ G  + A+E+  +M N        TY+SL+ G+ + G+  
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-----GCKPDVVA 509
           +   ++ +        + + YSV+I+   ++G   +A ++  QM ++     GCK  +  
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIST 917

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             +++ G    G +E A K+   M+ L+    PD  T   L+N  C  SN
Sbjct: 918 CRALLSGFAKVGEMEVAEKVMENMVRLQ--YIPDSATVIELINESCISSN 965



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 42/441 (9%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNC-------------------EPDIYTYCTLM 234
           +F+ +   +C  G  + A+ +   M  RN                      D   +  L 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           DG   +  ++EAV +          P      VL++ L +   L     +   M  +  +
Sbjct: 159 DGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 295 PNEVTYNTLIHGLCLKG---------------------NLDKAVSLLDRMVASKCMPNEV 333
            +  TY+ LI   C  G                     N+D A+ L + M+    +P + 
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+GL K+ R  D   +L+ M+     ++ + YS LI GL K   A+ A  L  +M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +  G      +Y   I  + + G  ++A+ +   MI +G    A  Y+SL++G+      
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +  E+  +M K N V +   Y  ++ G+C  G L  A  +  +M++ GC+P+VV Y+++
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I          +A+++  EM   E    PD+F YN L+  L K   +  +   L  M++ 
Sbjct: 459 IKTFLQNSRFGDAMRVLKEM--KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516

Query: 574 GCDPDLVTCNIFLTALKEKLE 594
           G  P+  T   F++   E  E
Sbjct: 517 GLKPNAFTYGAFISGYIEASE 537



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 16/266 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRV--VLEKSFIFIFKAYGKAHL--VEEAIRL 140
           T+ ++I  Y  SGD        +R+  E ++  ++  SF++     G   L  VE AI +
Sbjct: 699 TYCTIIDGYCKSGDLAEA----FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI-LPNTLTFNLVI 199
           F T  ++  C  +   FN+++N + + G      E  N +++        PN +T+N++I
Sbjct: 755 FGT--NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C+ G ++ A +LF +M   N  P + TY +L++G  K  R  E   + DE    G  
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-----GCLPNEVTYNTLIHGLCLKGNLD 314
           P  + ++V+IN   K G   +A  LVD MF K     GC  +  T   L+ G    G ++
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIIN 340
            A  +++ MV  + +P+  T   +IN
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELIN 958


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 155/493 (31%), Positives = 232/493 (47%), Gaps = 61/493 (12%)

Query: 211 AIQLFREMPVRNCE--PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           A +L+ EM  R+ E   D Y+ C ++ GLC E R++E   L++    +GC P  V +NVL
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+G C+ G++GR   L+  M +KG +P  VTY  +IH L  K +L K  SLL  M     
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            PN   Y T+I  L K   A     VL  M   +F  +   ++TLI+   +EG  E+A+K
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L ++ + +  +PN + Y+ LI G C  G+   A ++L EMI  G   +  T  +L+ G  
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLV 497

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE------------------------ 484
            SG+  +A+ + + MA+   + +   Y+VLI GLC+                        
Sbjct: 498 VSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKF 557

Query: 485 ------DG-----KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
                 DG     KL +AR ++  M  +G   D+VAY++MI G C +G + EA+   + M
Sbjct: 558 VYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSM 617

Query: 534 L---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT--------C 582
               C+     PD FTY  L++   K+ +I  ++  L  MM R C P++VT        C
Sbjct: 618 RKVGCI-----PDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYC 672

Query: 583 NIFLTALKEKLEAPQDGTDFLNE------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           NI  T   E L A                L   LFK+ +        E ML    SP  +
Sbjct: 673 NIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDA 732

Query: 637 TWERVVQEL--CR 647
           T   +V  L  CR
Sbjct: 733 TMHYLVNGLTNCR 745



 Score =  216 bits (549), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 242/517 (46%), Gaps = 18/517 (3%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           VEE  RL      E  C      +N +++   + G   R L     +   +   I+P  +
Sbjct: 292 VEEGRRLIEARWGE-GCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEM---EMKGIMPTVV 347

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+  +I  + R   +     L  EM  R   P++  Y T++  LCK     +A+ +L++M
Sbjct: 348 TYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQM 407

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
                 P  VTFN LI   C+ G++  A KL+     +   PN+++Y  LIHG C++G +
Sbjct: 408 VASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEV 467

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A  LL  M+     P+ VT G +I+GLV  G+  +   V   M ER+   +  IY+ L
Sbjct: 468 MVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVL 527

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ISGL K+     A  L  +M+E+  +P+  VY+ LIDG  R  K  +A +I   M   G 
Sbjct: 528 ISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGG 587

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +   Y++++KG+ +SG  ++AV     M K  C+ +E  Y+ LI G  + G ++ A  
Sbjct: 588 YRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALR 647

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNIL 550
               M+ R CKP++V Y+S+I G CN G+ + A  LF  M     +S+   P+V  Y +L
Sbjct: 648 FLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASM-----QSEGLFPNVVHYTVL 702

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           + +L K+     +      M+   C P+  T +  +  L             +N      
Sbjct: 703 IGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYG------MINSNCSDT 756

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
            +  + S    + + ++   L P+ S +  ++  LCR
Sbjct: 757 DQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCR 793



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 230/508 (45%), Gaps = 53/508 (10%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   + PN   +N VI  +C+      A+ +  +M     +PD+ T+ TL+   C+E  +
Sbjct: 373 KERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDV 432

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA+ LL E       P  +++  LI+G C  GE+  A+ L+  M  +G  P+ VT   L
Sbjct: 433 EEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGAL 492

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           IHGL + G +D+A+ + ++M   + MP+   Y  +I+GL K         +L+ M E+K 
Sbjct: 493 IHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKV 552

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             ++++Y+TLI G  +  K  DA K+++ M EKG   + V Y+A+I G C+ G  +EA  
Sbjct: 553 QPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVM 612

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
            +  M   GC  + FTY++L+ G+ + G    A+    DM K  C  N V Y+ LI G C
Sbjct: 613 CMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYC 672

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--------- 534
             G    A +++  M S G  P+VV Y+ +I  L       +A   F  ML         
Sbjct: 673 NIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDA 732

Query: 535 --------------------CLEPKS-------------------QPDVFTYNILLNALC 555
                               C +                       P +  YN ++ +LC
Sbjct: 733 TMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLC 792

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           + + +  +++L   M ++GC PD VT    L       ++ +  +   NE     F++  
Sbjct: 793 RHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVGKSGKWRSALPNE-----FQQDE 847

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
                K + ++ Q  +SP      RV+Q
Sbjct: 848 FEIICKYMTLLNQHVMSPVRDEVSRVLQ 875



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 220/524 (41%), Gaps = 90/524 (17%)

Query: 84  STFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + FY+ LI  Y   GD     ++L  M  +  +    ++  I    G+   + +   L  
Sbjct: 311 AVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLW 370

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M  E      V+ +N+V+  + +     +AL   N +V ++     P+ +TFN +I   
Sbjct: 371 EM-KERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASR---FDPDVVTFNTLIAAF 426

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CR G V+ A++L RE   R  EP+  +Y  L+ G C    +  A  LL EM   G  P  
Sbjct: 427 CREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDV 486

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT   LI+GL  +G++  A  + + M  +  +P+   YN LI GLC K  L  A +LL  
Sbjct: 487 VTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVE 546

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH------------------ 364
           M+  K  P++  Y T+I+G ++  +  D  ++   MEE+  +                  
Sbjct: 547 MLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGM 606

Query: 365 -----------------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                             +E+ Y+TLI G  K+G  + A++    MM++ CKPN V Y++
Sbjct: 607 MNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYAS 666

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI G C +G  D AE +   M + G   N   Y+ L+   F+  K  +A   ++ M  N+
Sbjct: 667 LICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNH 726

Query: 468 CVYNEV--------------------------------------------------CYSV 477
           C  N+                                                    Y+ 
Sbjct: 727 CSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNA 786

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           +I  LC    L +A  +  +M ++GC PD V + S+++G  + G
Sbjct: 787 IIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSSVG 830



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 192/443 (43%), Gaps = 68/443 (15%)

Query: 85  TFYSLIQHYANSGDFK-SLEMVLYRMRREKRVVLEK---SFIFIFKAYGKAHLVEEAIRL 140
           TF +LI  +   GD + +L+++   +RRE    LE    S+  +   +     V  A  L
Sbjct: 418 TFNTLIAAFCREGDVEEALKLLREAIRRE----LEPNQLSYTPLIHGFCVRGEVMVASDL 473

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
              M+   H    V +  ++++ ++  G    AL     +   +   ++P+   +N++I 
Sbjct: 474 LVEMIGRGHTPDVV-TLGALIHGLVVSGQVDEALMVREKMAERQ---VMPDANIYNVLIS 529

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+  ++  A  L  EM  +  +PD + Y TL+DG  + ++L +A  + + M+  G + 
Sbjct: 530 GLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYR 589

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
             V +N +I G CK+G +  A   + +M   GC+P+E TY TLI G   KG++  A+  L
Sbjct: 590 DIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFL 649

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEYIYSTLISGLFK 379
             M+  +C PN VTY ++I G   +G   D A VL  SM+      N   Y+ LI  LFK
Sbjct: 650 CDMMKRRCKPNIVTYASLICGYCNIGN-TDSAEVLFASMQSEGLFPNVVHYTVLIGSLFK 708

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTV------------------------------------ 403
           + KA  A   ++ M+   C PN                                      
Sbjct: 709 KDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHKKSALLDV 768

Query: 404 --------------VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
                          Y+A+I  LCR     +A E+  +M N GC  +  T+ SL+ GF  
Sbjct: 769 FKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNKGCLPDPVTFLSLLYGFSS 828

Query: 450 SGKGHKAVEIWKDMAKNNCVYNE 472
            GK  K    W+    N    +E
Sbjct: 829 VGKSGK----WRSALPNEFQQDE 847



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 22/269 (8%)

Query: 68  EIFNSTPKLGSYQLGDSTFY-SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK 126
           +IF    + G Y+  D   Y ++I+ Y  SG      M +  MR+   +  E ++  +  
Sbjct: 577 KIFEFMEEKGGYR--DIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLID 634

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
            Y K   ++ A+R    M+    CK  + ++ S++      G    A   +    + +  
Sbjct: 635 GYAKKGDIKAALRFLCDMMKR-RCKPNIVTYASLICGYCNIGNTDSAEVLF---ASMQSE 690

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL--CKENRL- 243
            + PN + + ++I ++ +      A   F  M + +C P+  T   L++GL  C+   + 
Sbjct: 691 GLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMIN 750

Query: 244 ------DEA---VLLLDEMQ---VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
                 D+A     LLD  +    DG  P    +N +I  LC++  LG+A +L + M  K
Sbjct: 751 SNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEKMSNK 810

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           GCLP+ VT+ +L++G    G   K  S L
Sbjct: 811 GCLPDPVTFLSLLYGFSSVGKSGKWRSAL 839


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 244/490 (49%), Gaps = 6/490 (1%)

Query: 97  GDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKS 156
           G  +     L +MR    V+   S+  +     ++   +EA+ ++  MV E   K ++K+
Sbjct: 173 GGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSE-GLKPSLKT 231

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F++++   +  G           +   + M + PN  T+ + I+ + R G +D A ++ +
Sbjct: 232 FSALM---VASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMK 288

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M    C PD+ TY  L+D LC   +LD+A+ L  +M+     P  VT+  L++     G
Sbjct: 289 RMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCG 348

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L +  K+   M   G  P+ VT+  L++ LC  G +++A  LLD M     +PN  TY 
Sbjct: 349 HLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYN 408

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+I+GL++  R  D   +  +ME        Y Y  LI    K G    A++ +++M  +
Sbjct: 409 TLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKAR 468

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  PN V  +A +  L  +G+  EA+ +  E+ ++G A ++ TY+ +MK + + G+  +A
Sbjct: 469 GIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEA 528

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           +++  +M+K  C  + +  + LI  L + G++ EA  ++ +M      P VV Y+ ++ G
Sbjct: 529 IKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAG 588

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           L   G +++A++LF  M        P+  T+N LL+ LCK   +  ++ +   M    C 
Sbjct: 589 LGKEGQIQKAVQLFESM--NGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCR 646

Query: 577 PDLVTCNIFL 586
           PD++T N  +
Sbjct: 647 PDVLTFNTII 656



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/548 (24%), Positives = 263/548 (47%), Gaps = 51/548 (9%)

Query: 83   DSTFYSLIQH-YANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAI 138
            DS  Y+++   Y+  G       +L  M +   E  V++  S I       KA  VEEA 
Sbjct: 508  DSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLI---DTLYKAGRVEEAW 564

Query: 139  RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
            ++F  M +E +   TV ++N +L  + +EG   +A++ +  +         PNT+TFN +
Sbjct: 565  QMFCRM-EEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM---NGHGCSPNTITFNTL 620

Query: 199  IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
            +  +C+   VD A+++F +M   NC PD+ T+ T++ G  K+N++  A+ L  +M+    
Sbjct: 621  LDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK-KLL 679

Query: 259  FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  VT   L+ G+ K+G++  A ++ ++ F + G   +   +  ++ G+  +   +KA+
Sbjct: 680  RPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAI 739

Query: 318  SLLDRMVA-SKCMPNEV-----------------------------------TYGTIING 341
               +R+V  + C  + V                                    Y  +I+G
Sbjct: 740  LFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDG 799

Query: 342  LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
             +++        +   M+      + + Y++LI    K GK  +   L+ +M+ +GCKPN
Sbjct: 800  FLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPN 859

Query: 402  TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            T+ Y+ +I  L +  + D+A ++ + +++   +    T+  L+ G  +SG+   A E++ 
Sbjct: 860  TITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFD 919

Query: 462  DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
             M    C  N   Y++L++G  + G +  A   + +M+  G +PD+ +Y+ ++  LC AG
Sbjct: 920  GMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAG 979

Query: 522  SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
             V++AL  F ++   +    PD+  YN+++N L +      ++ L + M +RG  PDL T
Sbjct: 980  RVDDALHYFEKLK--QAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYT 1037

Query: 582  CNIFLTAL 589
             N  +  L
Sbjct: 1038 YNSLILNL 1045



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 144/577 (24%), Positives = 265/577 (45%), Gaps = 71/577 (12%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++I +   +GK+    +A+  F  M         V + N+ L  + + G    A   +N 
Sbjct: 441 TYILLIDYHGKSGHPGKALETFEKMKARGIAPNIV-ACNASLYSLAEMGRLGEAKAMFNE 499

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   K   + P+++T+N+++K   ++G VD AI+L  EM    CEPD+    +L+D L K
Sbjct: 500 L---KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYK 556

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R++EA  +   M+     PT VT+N+L+ GL K G++ +A +L ++M   GC PN +T
Sbjct: 557 AGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTIT 616

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +NTL+  LC    +D A+ +  +M    C P+ +T+ TII+G +K  +  +   +   M+
Sbjct: 617 FNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMK 676

Query: 360 E--RKFHVNEYIYSTLISGLFKEGKAEDAMKL----------------WKQMM-----EK 396
           +  R  HV      TL+ G+ K G+ EDA ++                W+ +M     E 
Sbjct: 677 KLLRPDHVT---LCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEA 733

Query: 397 G----------------CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN-GCAANAFT 439
           G                CK ++V+   +I  LC+  K   A  +  +     G       
Sbjct: 734 GTEKAILFGERLVCRAICKDDSVLI-PIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKV 792

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ L+ GF E      A  ++++M    C  +   Y+ LI    + GK+ E   ++ +ML
Sbjct: 793 YNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEML 852

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           +RGCKP+ + Y+ +I  L  +  +++A+ L+  ++  +    P   T+  L++ L K   
Sbjct: 853 TRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTP--CTFGPLIDGLLKSGR 910

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +  + ++ + M+  GC P+    NI +    +             + A   FKR      
Sbjct: 911 LDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHV---------DTACEFFKR------ 955

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                 M+++ + P   ++  +V  LC   R+  A++
Sbjct: 956 ------MVKEGIRPDLKSYTILVDILCIAGRVDDALH 986



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/536 (25%), Positives = 241/536 (44%), Gaps = 44/536 (8%)

Query: 88   SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
            SLI     +G  +    +  RM          ++  +    GK   +++A++LF +M + 
Sbjct: 549  SLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESM-NG 607

Query: 148  FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
              C     +FN++L+ + +      AL+ +  +     MN  P+ LTFN +I    +   
Sbjct: 608  HGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTT---MNCRPDVLTFNTIIHGFIKQNQ 664

Query: 208  VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM------QVDGCFPT 261
            + NAI LF +M  +   PD  T CTL+ G+ K  ++++A  + ++        +D  F  
Sbjct: 665  IKNAIWLFHQMK-KLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWE 723

Query: 262  PVTFNVLING----------------LCKNGEL----------GRAAKLVDNMFLK---- 291
             V   +L                   +CK+  +           +   +  N+F+K    
Sbjct: 724  DVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKE 783

Query: 292  -GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
             G  P    YN LI G     N++ A +L + M ++ C P+  TY ++I+   K G+  +
Sbjct: 784  LGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINE 843

Query: 351  GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
               +   M  R    N   Y+ +IS L K  + + AM L+  ++     P    +  LID
Sbjct: 844  LFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLID 903

Query: 411  GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
            GL + G+ D+A E+   M++ GC  N+  Y+ L+ G+ + G    A E +K M K     
Sbjct: 904  GLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRP 963

Query: 471  NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
            +   Y++L+  LC  G++ +A   + ++   G  PD+VAY+ MI+GL  +   EEAL LF
Sbjct: 964  DLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLF 1023

Query: 531  NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            +EM        PD++TYN L+  L     I  +  +   +   G  P++ T N  +
Sbjct: 1024 HEMQ--NRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALI 1077



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 225/485 (46%), Gaps = 44/485 (9%)

Query: 134  VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
            V+ A+++F+ M    +C+  V +FN++++  I++     A+  ++ +       + P+ +
Sbjct: 630  VDLALKMFYKMT-TMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL----LRPDHV 684

Query: 194  TFNLVIKTVCRLGLVDNAIQLFREMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
            T   ++  V + G +++A ++  +   +     D   +  +M G+  E   ++A+L  + 
Sbjct: 685  TLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGER 744

Query: 253  MQVD------------------------------------GCFPTPVTFNVLINGLCKNG 276
            +                                       G  PT   +N+LI+G  +  
Sbjct: 745  LVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVH 804

Query: 277  ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
             +  A  L + M   GC P+  TYN+LI      G +++   L D M+   C PN +TY 
Sbjct: 805  NVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYN 864

Query: 337  TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
             +I+ LVK  R      +  ++    F      +  LI GL K G+ +DA +++  M+  
Sbjct: 865  MVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHY 924

Query: 397  GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
            GC+PN+ +Y+ L++G  ++G  D A E    M+  G   +  +Y+ L+     +G+   A
Sbjct: 925  GCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDA 984

Query: 457  VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            +  ++ + +     + V Y+++I+GL    +  EA  ++ +M +RG  PD+  Y+S+I  
Sbjct: 985  LHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILN 1044

Query: 517  LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            L   G +EEA K++ E+  +  K  P+VFTYN L+       N   +  +   MM  GCD
Sbjct: 1045 LGIVGMIEEAGKIYEELQFIGLK--PNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCD 1102

Query: 577  PDLVT 581
            P+  T
Sbjct: 1103 PNTGT 1107



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 159/331 (48%)

Query: 183  AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
             K + + P    +NL+I     +  V+ A  LF EM    C PD +TY +L+D   K  +
Sbjct: 781  TKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGK 840

Query: 243  LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            ++E   L DEM   GC P  +T+N++I+ L K+  L +A  L  N+      P   T+  
Sbjct: 841  INELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGP 900

Query: 303  LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
            LI GL   G LD A  + D MV   C PN   Y  ++NG  KLG           M +  
Sbjct: 901  LIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG 960

Query: 363  FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
               +   Y+ L+  L   G+ +DA+  ++++ + G  P+ V Y+ +I+GL R  + +EA 
Sbjct: 961  IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020

Query: 423  EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
             +  EM N G   + +TY+SL+      G   +A +I++++       N   Y+ LI G 
Sbjct: 1021 SLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGY 1080

Query: 483  CEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
               G    A  ++ +M+  GC P+   ++ +
Sbjct: 1081 TLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 215/454 (47%), Gaps = 11/454 (2%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            TF ++I  +      K+   + ++M++  R     +   +     K+  +E+A R+    
Sbjct: 651  TFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPD-HVTLCTLLPGVIKSGQIEDAFRITEDF 709

Query: 145  VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
              +         +  V+  I+ E    +A+ F   +V      I  +      +IK +C+
Sbjct: 710  FYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRA---ICKDDSVLIPIIKVLCK 766

Query: 205  LGLVDNAIQLF----REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
                  A  +F    +E+ V+   P +  Y  L+DG  + + ++ A  L +EM+  GC P
Sbjct: 767  HKKTSVARNVFVKFTKELGVK---PTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAP 823

Query: 261  TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
               T+N LI+   K+G++     L D M  +GC PN +TYN +I  L     LDKA+ L 
Sbjct: 824  DTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLY 883

Query: 321  DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
              +V+    P   T+G +I+GL+K GR  D   +   M       N  IY+ L++G  K 
Sbjct: 884  YNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKL 943

Query: 381  GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            G  + A + +K+M+++G +P+   Y+ L+D LC  G+ D+A     ++   G   +   Y
Sbjct: 944  GHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAY 1003

Query: 441  SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
            + ++ G   S +  +A+ ++ +M     V +   Y+ LI  L   G + EA  ++ ++  
Sbjct: 1004 NLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQF 1063

Query: 501  RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
             G KP+V  Y+++I G   +G+ E A  ++ +M+
Sbjct: 1064 IGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMM 1097



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 128/551 (23%), Positives = 239/551 (43%), Gaps = 76/551 (13%)

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
           +F FK+ G+   V       + M++     R V+    V + ++Q  +  R ++ Y  I 
Sbjct: 108 LFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFD-LMQRQIIRRNVDTYLIIF 166

Query: 182 NA-----------------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
            +                 +    + N  ++N +I  + + G    A++++R M     +
Sbjct: 167 KSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLK 226

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P + T+  LM    K   +   + LL+EM+  G  P   T+ + I  L ++G++  A ++
Sbjct: 227 PSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRI 286

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           +  M   GC P+ VTY  LI  LC    LD A+ L  +M +S   P++VTY T+++    
Sbjct: 287 MKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSD 346

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G                 H++               K E   K+W +M   G  P+ V 
Sbjct: 347 CG-----------------HLD---------------KVE---KIWTEMEADGYAPDVVT 371

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           ++ L++ LC+ G+ +EA ++L  M   G   N  TY++L+ G   + +   A++++ +M 
Sbjct: 372 FTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNME 431

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
                     Y +LI    + G   +A   + +M +RG  P++VA ++ ++ L   G + 
Sbjct: 432 SLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLG 491

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA  +FNE+        PD  TYN+++    K   +  +I LL+ M    C+PD++    
Sbjct: 492 EAKAMFNEL--KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIV--- 546

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
                             +N L   L+K  R    +++   M +  L+P   T+  ++  
Sbjct: 547 ------------------INSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAG 588

Query: 645 LCRPKRIQAAI 655
           L +  +IQ A+
Sbjct: 589 LGKEGQIQKAV 599



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 105/211 (49%), Gaps = 4/211 (1%)

Query: 130  KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
            K+  +++A  +F  MV  + C+     +N ++N   + G    A EF+  +V      I 
Sbjct: 907  KSGRLDDAHEMFDGMV-HYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKE---GIR 962

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            P+  ++ +++  +C  G VD+A+  F ++     +PD+  Y  +++GL +  R +EA+ L
Sbjct: 963  PDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSL 1022

Query: 250  LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
              EMQ  G  P   T+N LI  L   G +  A K+ + +   G  PN  TYN LI G  L
Sbjct: 1023 FHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTL 1082

Query: 310  KGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
             GN + A  +  +M+   C PN  T+  + N
Sbjct: 1083 SGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113


>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Brachypodium distachyon]
          Length = 684

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 232/487 (47%), Gaps = 26/487 (5%)

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           GL   A E +   V    + + P+T  +N +I    R G VD A   F++MP   C+PD 
Sbjct: 155 GLAQYAHEVF---VQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDC 211

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
           +TY TL+ G+C+   +DEA+ L+ +M+  G  P   T+ +L++G C  G    A  + D 
Sbjct: 212 FTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDT 271

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  KG  PNE +Y TL+HG        KA  +L   +  +  P+   +  ++  L K   
Sbjct: 272 MKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEM 331

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           A +   V   M  R + ++  I+  ++S   K  +  D   L    ++KG  P   VY  
Sbjct: 332 AKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIM 391

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           +I  L       +A   L  M+ +G  +   +Y+ ++  F ++G   KA EI K+M +  
Sbjct: 392 VIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEMREKG 451

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            + N V ++ LI G  + G +  A+ V   ++  G  PD++ ++S+I+GLC+   +++A 
Sbjct: 452 VLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQLDDAF 511

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
             FNEM   E   +P+  TYN+L++ALC   +++ +IDLLN M   G  PD  + N    
Sbjct: 512 DCFNEM--AEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFN---- 565

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                  AP           +   + ++      I   ML+  + P   T+  +++ LC 
Sbjct: 566 -------AP----------ILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCD 608

Query: 648 PKRIQAA 654
            +RI  A
Sbjct: 609 ERRIDEA 615



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/495 (23%), Positives = 210/495 (42%), Gaps = 43/495 (8%)

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA-L 174
           V E+    +  ++G+  L + A  +F  M      + +   +N+++   ++ G    A L
Sbjct: 139 VSEELLRALIASWGRLGLAQYAHEVFVQM-PRLGLRPSTAVYNALIVASVRAGAVDTAYL 197

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
            F     +       P+  T+N ++  VC+ G++D A++L R+M      P+++TY  L+
Sbjct: 198 RFQQMPADGCQ----PDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLV 253

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING----------------------- 271
           DG C   R ++AV + D M+  G  P   ++  L++G                       
Sbjct: 254 DGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPP 313

Query: 272 ------------LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
                       L KN       ++   M  +G L +   +  ++        L     L
Sbjct: 314 PHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGL 373

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           LD  V     P    Y  +I  L+    +      L  M           Y+ +I    K
Sbjct: 374 LDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVK 433

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G  + A ++ K+M EKG  PN V ++ LI G  ++G    A+ +L  ++ +G   +  T
Sbjct: 434 AGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIIT 493

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           ++SL+ G   + +   A + + +MA+     N   Y+VL+H LC  G + +A  +  +M 
Sbjct: 494 FTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMK 553

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G  PD  ++++ I   C    V++A  +FN ML L     PD +TYN L+ ALC +  
Sbjct: 554 KDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRL--GVVPDNYTYNSLIKALCDERR 611

Query: 560 ISHSIDLLNSMMDRG 574
           I  + ++L  M   G
Sbjct: 612 IDEAKEILLLMESSG 626



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 220/527 (41%), Gaps = 46/527 (8%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           ++ +    +LI  +   G  +    V  +M R         +  +  A  +A  V+ A  
Sbjct: 138 EVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYL 197

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
            F  M  +  C+    ++N++++ + Q G+   AL     +  A    I PN  T+ +++
Sbjct: 198 RFQQMPAD-GCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGA---GIRPNVFTYTMLV 253

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG----------------------- 236
              C  G  ++A+ +F  M  +   P+  +Y TL+ G                       
Sbjct: 254 DGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPP 313

Query: 237 ------------LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
                       L K     E V +  +M   G       F ++++   K  EL     L
Sbjct: 314 PHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGL 373

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           +D+   KG  P    Y  +I  L    +  KA   L RMV    +    +Y  +I+  VK
Sbjct: 374 LDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVK 433

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G     A ++  M E+    N   ++TLISG  K G   +A  + K +ME G  P+ + 
Sbjct: 434 AGAVDKAAEIIKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIIT 493

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           +++LI+GLC   + D+A +   EM   G   NA TY+ LM     +G  +KA+++   M 
Sbjct: 494 FTSLINGLCHTHQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMK 553

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           K+    +   ++  I   C   K+ +AR ++  ML  G  PD   Y+S+I  LC+   ++
Sbjct: 554 KDGITPDAYSFNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRID 613

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNI---LLNALCKQSNISHSIDLLN 568
           EA     E+L L   S     T++    +++AL K    S +  L+N
Sbjct: 614 EA----KEILLLMESSGSSATTHHTHLPIVSALTKTGQFSKAGQLMN 656



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 101/475 (21%), Positives = 187/475 (39%), Gaps = 53/475 (11%)

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L D L +      +  L+ E++  GC  +      LI    + G    A ++   M   
Sbjct: 111 ALEDALWRRGPAVLSAALVAEVRGCGCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRL 170

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+   YN LI      G +D A     +M A  C P+  TY T+++G+ + G   + 
Sbjct: 171 GLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEA 230

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            R++  ME      N + Y+ L+ G    G+ EDA+ ++  M EKG  PN   Y  L+ G
Sbjct: 231 LRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVHG 290

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
             R     +A  +L E +      +   +  ++    ++    + VE+ K M     + +
Sbjct: 291 AFRCLGRHKAYVMLTEWLGREPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLD 350

Query: 472 EVCYSVLIH------------GLCED-----------------------GKLREARMVWT 496
              + +++             GL +D                           +A     
Sbjct: 351 NAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLK 410

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M+  G    V +Y+ +I     AG+V++A ++  EM   E    P++ T+N L++   K
Sbjct: 411 RMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEIIKEM--REKGVLPNLVTFNTLISGYSK 468

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA---IR---- 609
             N+ ++  +L  +M+ G  PD++T    +  L    +   D  D  NE+A   +R    
Sbjct: 469 LGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCHTHQL-DDAFDCFNEMAEWGVRPNAH 527

Query: 610 --------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                   L      +    ++  M +  ++P   ++   +   CR K++  A N
Sbjct: 528 TYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYSFNAPILSFCRMKKVDKARN 582



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 90/192 (46%), Gaps = 2/192 (1%)

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           + +W          +  V  AL D L R G    +  ++ E+   GC  +     +L+  
Sbjct: 91  LYVWASRFGAHFARDASVRRALEDALWRRGPAVLSAALVAEVRGCGCEVSEELLRALIAS 150

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           +   G    A E++  M +     +   Y+ LI      G +  A + + QM + GC+PD
Sbjct: 151 WGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPD 210

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
              Y++++HG+C  G ++EAL+L  +M       +P+VFTY +L++  C       ++ +
Sbjct: 211 CFTYNTLVHGVCQRGIIDEALRLVRQM--EGAGIRPNVFTYTMLVDGFCNAGRPEDAVHV 268

Query: 567 LNSMMDRGCDPD 578
            ++M ++G  P+
Sbjct: 269 FDTMKEKGVSPN 280


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 145/499 (29%), Positives = 232/499 (46%), Gaps = 63/499 (12%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            + P+    N V++ +      D+   +  EM     EP I TY TL+D   KE R D+ 
Sbjct: 197 GVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKV 256

Query: 247 VLLLDEMQV--DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            +LL EM+    GC P  VT NV+I GL + G+L  AA++V+ M L     +  TYN LI
Sbjct: 257 AMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-KASSFTYNPLI 315

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSMEERKF 363
            GL  KG + KA  L   M     MP  VTY  +I+GL++ G+ V+ A+V  + M     
Sbjct: 316 TGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQ-VEAAQVKFVEMRAMGL 374

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y++L++G  K G  ++A+ L+  +   G  P  + Y+ LIDG CR+G  +EA  
Sbjct: 375 QPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARR 434

Query: 424 ILFEMINNGCAANAFTYSSLMKG------------FFES--------------------- 450
           +  EM+  GC  +  TY+ LMKG            FF+                      
Sbjct: 435 LKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAEL 494

Query: 451 --GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             G   KA  + + M       + V Y++LI GLC+ G L +A+ +  +M+  G +PD +
Sbjct: 495 TLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCI 554

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +IH  C  G + EA K F +M  +     P   TY + ++A C++ N+  +     
Sbjct: 555 TYTCLIHAHCERGLLREARKFFKDM--ISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFR 612

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
            M++ G +P+ +T N+ + A                     L +  RT   ++    ML+
Sbjct: 613 KMLEEGVEPNEITYNVLIHA---------------------LCRTGRTQLAYRHFHEMLE 651

Query: 629 KFLSPQTSTWERVVQELCR 647
           + L P   T+  ++   C+
Sbjct: 652 RGLVPNKYTYTLLIDGNCK 670



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 233/487 (47%), Gaps = 10/487 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI--FIFKAYGKAHLVEEAIRLFH 142
           T+ +L+  +   G    + M+L  M       L        +     +   +EEA  +  
Sbjct: 239 TYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVE 298

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M      K +  ++N ++  ++ +G   +A +    + N     I+P  +T+N +I  +
Sbjct: 299 GM--RLSKKASSFTYNPLITGLLAKGFVKKADDLQLEMENE---GIMPTVVTYNAMIHGL 353

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            + G V+ A   F EM     +PD+ TY +L++G CK   L EA+LL  +++  G  PT 
Sbjct: 354 LQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTV 413

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           +T+N+LI+G C+ G+L  A +L + M  +GCLP+  TY  L+ G     +L  A    D 
Sbjct: 414 LTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDE 473

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M++    P+   Y T I   + LG      R+   M       +   Y+ LI GL K G 
Sbjct: 474 MLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGN 533

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             DA  L  +M+  G +P+ + Y+ LI   C  G   EA +   +MI++G A +A TY+ 
Sbjct: 534 LNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTV 593

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
            +  +   G  + A   ++ M +     NE+ Y+VLIH LC  G+ + A   + +ML RG
Sbjct: 594 FIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERG 653

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P+   Y+ +I G C  G+ E+A++ + EM   +    PD  T+  L      + +++H
Sbjct: 654 LVPNKYTYTLLIDGNCKEGNWEDAMRFYFEM--HQNGIHPDYLTHKALFKGF-DEGHMNH 710

Query: 563 SIDLLNS 569
           +I+ L +
Sbjct: 711 AIEYLEN 717



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/435 (29%), Positives = 209/435 (48%), Gaps = 3/435 (0%)

Query: 158 NSVLNVIIQEGLYHRA-LEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           N V + ++  GL  +  LE    +V    ++   ++ T+N +I  +   G V  A  L  
Sbjct: 273 NDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQL 332

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM      P + TY  ++ GL +  +++ A +   EM+  G  P  +T+N L+NG CK G
Sbjct: 333 EMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAG 392

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L  A  L  ++   G  P  +TYN LI G C  G+L++A  L + MV   C+P+  TY 
Sbjct: 393 SLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYT 452

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++ G                M  +    + + Y+T I      G    A +L + MM +
Sbjct: 453 ILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLE 512

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G   +TV Y+ LIDGLC+ G  ++A+++  +M++NG   +  TY+ L+    E G   +A
Sbjct: 513 GISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREA 572

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            + +KDM  +    + V Y+V IH  C  G L  A   + +ML  G +P+ + Y+ +IH 
Sbjct: 573 RKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHA 632

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           LC  G  + A + F+EML  E    P+ +TY +L++  CK+ N   ++     M   G  
Sbjct: 633 LCRTGRTQLAYRHFHEML--ERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIH 690

Query: 577 PDLVTCNIFLTALKE 591
           PD +T         E
Sbjct: 691 PDYLTHKALFKGFDE 705



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 223/459 (48%), Gaps = 19/459 (4%)

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           +  F EM      PD+     ++  L    R D+   +  EM   G  P+ VT+N L++ 
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 272 LCKNGELGRAAKLVDNMFLK--GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
             K G   + A L+  M  +  GCLPN+VT+N +I GL  KG+L++A  +++ M  SK  
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-K 305

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
            +  TY  +I GL+  G       + + ME          Y+ +I GL + G+ E A   
Sbjct: 306 ASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + +M   G +P+ + Y++L++G C+ G   EA  +  ++ + G A    TY+ L+ G+  
Sbjct: 366 FVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCR 425

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G   +A  + ++M +  C+ +   Y++L+ G      L  AR  + +MLS+G +PD  A
Sbjct: 426 LGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFA 485

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y++ I      G++ +A +L  E++ LE  S  D  TYNIL++ LCK  N++ + DL   
Sbjct: 486 YNTRIRAELTLGAIAKAFRL-REVMMLEGISS-DTVTYNILIDGLCKTGNLNDAKDLQMK 543

Query: 570 MMDRGCDPDLVTCNIFLTALKEK---LEAPQDGTDFLNE------LAIRLF-----KRQR 615
           M+  G  PD +T    + A  E+    EA +   D +++      +   +F     +R  
Sbjct: 544 MVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGN 603

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               +     ML++ + P   T+  ++  LCR  R Q A
Sbjct: 604 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLA 642


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 250/507 (49%), Gaps = 8/507 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+ ++ +     G  +   + L +MR+   V+   S+I +     K+    EA++++  
Sbjct: 158 NTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRR 217

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA-KHMNILPNTLTFNLVIKTV 202
           MV E   K ++K++++++  + +     R +E    ++   + + + PN  TF + I+ +
Sbjct: 218 MVSE-GIKPSLKTYSALMVALGK----RRDIETVMGLLQEMESLGLRPNIYTFTICIRIL 272

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            R G +D A  + + M    C PD+ TY  L+D LC   +L+ A  L  +M+     P  
Sbjct: 273 GRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDR 332

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+  L++    +G+L    +    M   G LP+ VT+  LI  LC  G +D+A   LD 
Sbjct: 333 VTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDV 392

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M      PN  TY T+I GL++L R  +   +  SME        Y Y   I    K G+
Sbjct: 393 MKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGE 452

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           +  A+K +++M   G  PN V  +A +  L   G+ +EA+E    +   G A +A TY+ 
Sbjct: 453 SGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNI 512

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           LM+ + ++G+   A+++  +M +N C    V  + LI  L +  ++ EA  ++ +M    
Sbjct: 513 LMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMK 572

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P VV Y++++ GL   G V+EA  LF  M+       P+  ++N LL+ LCK   +  
Sbjct: 573 LAPTVVTYNTLLAGLGKEGRVQEATALFKGMIA--DDCPPNTISFNTLLDCLCKNGEVDL 630

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           ++ +L  M +  C PD++T N  +  L
Sbjct: 631 ALKMLFRMTEMNCFPDVLTYNTVIYGL 657



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 143/565 (25%), Positives = 269/565 (47%), Gaps = 53/565 (9%)

Query: 66   SDEIFNSTPKLGSYQLGDSTFYSLIQH-YANSGDFKSLEMVLYRMRR---EKRVVLEKSF 121
            + E FN   K G     D+  Y+++   Y  +G       +L  M     +  VV+  S 
Sbjct: 491  AKEFFNGLKKCGLAP--DAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSL 548

Query: 122  IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
            I       KA  V+EA ++F  M  E     TV ++N++L  + +EG    A   +  ++
Sbjct: 549  I---DTLYKADRVDEAWKMFQRM-KEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMI 604

Query: 182  NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
                 +  PNT++FN ++  +C+ G VD A+++   M   NC PD+ TY T++ GL KEN
Sbjct: 605  AD---DCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKEN 661

Query: 242  RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG------------------------- 276
            R++ A  L  +M+    +P  VT   L+ G+ K+G                         
Sbjct: 662  RVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFW 720

Query: 277  -----------ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
                       E+G++    +++       ++     L+  LC  G    A ++  ++  
Sbjct: 721  EDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTK 780

Query: 326  SKCM-PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            S C+ P+   Y ++I+GL+K         +   M+      + + Y+  +  L K GK +
Sbjct: 781  SFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIK 840

Query: 385  DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            +   L+++M+ +GCKPNT+ ++ +I GL +    D+A ++ +++++   +   +TY  L+
Sbjct: 841  ELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLI 900

Query: 445  KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             G  + G+  +A + +++M    C+ N   Y++L++G  + G +  A  ++ +M+  G +
Sbjct: 901  DGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIR 960

Query: 505  PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            PD+ +YS M+  LC  G V++AL  F E+        PD+  YN+++N L +   +  ++
Sbjct: 961  PDLKSYSIMVDCLCMVGKVDDALHYFEELKL--SGLDPDLVCYNLMINGLGRSQRVEEAL 1018

Query: 565  DLLNSMMDRGCDPDLVTCNIFLTAL 589
             L + M +RG  PDL T N  +  L
Sbjct: 1019 SLFDEMRNRGITPDLYTYNALILNL 1043



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 154/608 (25%), Positives = 250/608 (41%), Gaps = 141/608 (23%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F    +  G+A  ++EA  +   M D+  C   V ++  +++ +   G  + A E +  
Sbjct: 264 TFTICIRILGRAGKIDEAYGILKRM-DDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLK 322

Query: 180 IVNAKHM--------------------------------NILPNTLTFNLVIKTVCRLGL 207
           +  + H                                   LP+ +TF ++I  +C++G 
Sbjct: 323 MKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGK 382

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           VD A      M  +   P+++TY TL+ GL + NRLDEA+ L + M+  G   T  T+ +
Sbjct: 383 VDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYIL 442

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPN------------------------------- 296
            I+   K+GE G+A K  + M   G +PN                               
Sbjct: 443 FIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCG 502

Query: 297 ----EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
                +TYN L+      G +D A+ LL  M  + C P  V   ++I+ L K  R  +  
Sbjct: 503 LAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAW 562

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           ++   M+E K       Y+TL++GL KEG+ ++A  L+K M+   C PNT+ ++ L+D L
Sbjct: 563 KMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCL 622

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSS------------------------------ 442
           C+ G+ D A ++LF M    C  +  TY++                              
Sbjct: 623 CKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIYPDYV 682

Query: 443 ----LMKGFFESGKGHKAVEI----------------WKDMAKNNCVYNEVCYSVL---- 478
               L+ G  + G+   A  +                W+D+     +  E+  S+L    
Sbjct: 683 TLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAES 742

Query: 479 ----------------IHGLCEDGKLREARMVWTQMLSRGC-KPDVVAYSSMIHGLCNAG 521
                           +  LC+ GK  +A  V+ ++    C  P + AY+S+I GL  A 
Sbjct: 743 LVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKAR 802

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
             E A  LF +M        PDVFTYN+ L+AL K   I    DL   M+ RGC P+ +T
Sbjct: 803 LTEMAWGLFYKMK--NAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTIT 860

Query: 582 CNIFLTAL 589
            NI +  L
Sbjct: 861 HNIVIFGL 868



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 150/517 (29%), Positives = 243/517 (47%), Gaps = 46/517 (8%)

Query: 108  RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE 167
            RM+  K      ++  +    GK   V+EA  LF  M+ +  C     SFN++L+ + + 
Sbjct: 567  RMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIAD-DCPPNTISFNTLLDCLCKN 625

Query: 168  GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
            G    AL+    +     MN  P+ LT+N VI  + +   V+ A  LF +M  +   PD 
Sbjct: 626  GEVDLALKM---LFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDY 681

Query: 228  YTYCTLMDGLCKENRLDEAVLLLDEM------QVDGCFPTPVTFNVLI------------ 269
             T CTL+ G+ K+ R+++A  +  E         DG F   +   +LI            
Sbjct: 682  VTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAE 741

Query: 270  ----NGLCKNGE--------LGRAAKLVD--NMFLK----GCL-PNEVTYNTLIHGLCLK 310
                N +C++          L +  K VD  N+FLK     C+ P+   YN+LI GL LK
Sbjct: 742  SLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGL-LK 800

Query: 311  GNL-DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              L + A  L  +M  + C P+  TY   ++ L K G+  +   +   M  R    N   
Sbjct: 801  ARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTIT 860

Query: 370  YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            ++ +I GL K    + A+ L+  +M     P    Y  LIDGL ++G+ +EA++   EM+
Sbjct: 861  HNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEML 920

Query: 430  NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            + GC  N   Y+ LM GF + G    A E+++ M K     +   YS+++  LC  GK+ 
Sbjct: 921  DYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVD 980

Query: 490  EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            +A   + ++   G  PD+V Y+ MI+GL  +  VEEAL LF+EM        PD++TYN 
Sbjct: 981  DALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMR--NRGITPDLYTYNA 1038

Query: 550  LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            L+  L     +  +  +   +  +G +P++ T N  +
Sbjct: 1039 LILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALI 1075



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 183/338 (54%), Gaps = 1/338 (0%)

Query: 198  VIKTVCRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            ++K +C+ G   +A  +F ++    C  P +  Y +L+DGL K    + A  L  +M+  
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817

Query: 257  GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            GC P   T+N+ ++ L K+G++     L + M  +GC PN +T+N +I GL    +LDKA
Sbjct: 818  GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKA 877

Query: 317  VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
            + L   +++    P   TYG +I+GL+KLGR  +  +    M +     N  +Y+ L++G
Sbjct: 878  IDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG 937

Query: 377  LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
              K+G  E A +L+++M+++G +P+   YS ++D LC VGK D+A     E+  +G   +
Sbjct: 938  FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPD 997

Query: 437  AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
               Y+ ++ G   S +  +A+ ++ +M       +   Y+ LI  L   G + EA  ++ 
Sbjct: 998  LVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYE 1057

Query: 497  QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
            ++  +G +P+V  Y+++I G   +G+ + A  ++ +M+
Sbjct: 1058 ELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMM 1095



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 134/490 (27%), Positives = 230/490 (46%), Gaps = 54/490 (11%)

Query: 134  VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
            V+ A+++   M  E +C   V ++N+V+  +I+E   + A   ++ +       I P+ +
Sbjct: 628  VDLALKMLFRMT-EMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV----IYPDYV 682

Query: 194  TFNLVIKTVCRLGLVDNAIQ-----------------------------------LFREM 218
            T   ++  V + G +++A +                                   LF E 
Sbjct: 683  TLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAES 742

Query: 219  PVRN--CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF-PTPVTFNVLINGLCKN 275
             V N  CE D      L+  LCK  +  +A  +  ++    C  P+   +N LI+GL K 
Sbjct: 743  LVCNTICEDD-SVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKA 801

Query: 276  GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
                 A  L   M   GC P+  TYN  +  L   G + +   L + M+   C PN +T+
Sbjct: 802  RLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITH 861

Query: 336  GTIINGLVK---LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
              +I GLVK   L +A+D    LMS +   F    + Y  LI GL K G+ E+A + +++
Sbjct: 862  NIVIFGLVKSNSLDKAIDLYYDLMSGD---FSPTPWTYGPLIDGLLKLGRLEEAKQFFEE 918

Query: 393  MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
            M++ GC PN  +Y+ L++G  + G  + A E+   M+  G   +  +YS ++      GK
Sbjct: 919  MLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGK 978

Query: 453  GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
               A+  ++++  +    + VCY+++I+GL    ++ EA  ++ +M +RG  PD+  Y++
Sbjct: 979  VDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNA 1038

Query: 513  MIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            +I  L  AG VEEA K++ E   L+ K  +P+VFTYN L+       N   +  +   MM
Sbjct: 1039 LILNLGIAGMVEEAGKMYEE---LQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMM 1095

Query: 572  DRGCDPDLVT 581
              GC P+  T
Sbjct: 1096 VGGCRPNTGT 1105



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 167/345 (48%), Gaps = 1/345 (0%)

Query: 170  YHRALEFYNHIVN-AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
            + +A++ YN  +   K   I P+   +N +I  + +  L + A  LF +M    C PD++
Sbjct: 765  HGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVF 824

Query: 229  TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
            TY   +D L K  ++ E   L +EM   GC P  +T N++I GL K+  L +A  L  ++
Sbjct: 825  TYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDL 884

Query: 289  FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
                  P   TY  LI GL   G L++A    + M+   CMPN   Y  ++NG  K G  
Sbjct: 885  MSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDV 944

Query: 349  VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
                 +   M +     +   YS ++  L   GK +DA+  ++++   G  P+ V Y+ +
Sbjct: 945  ETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLM 1004

Query: 409  IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
            I+GL R  + +EA  +  EM N G   + +TY++L+     +G   +A ++++++     
Sbjct: 1005 INGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGL 1064

Query: 469  VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
              N   Y+ LI G    G    A  V+ +M+  GC+P+   ++ +
Sbjct: 1065 EPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 130/519 (25%), Positives = 226/519 (43%), Gaps = 60/519 (11%)

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
           ++A  F+N +  A+   ++  T T N V++ +     V++ + +F  M  +  +  I TY
Sbjct: 103 NQAFSFFNSV--AEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTY 160

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            T+   L     L EA + L++M+  G      ++  LI+ L K+G    A K+   M  
Sbjct: 161 LTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVS 220

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
           +G  P+  TY+ L+  L  + +++  + LL  M +    PN  T+   I  L + G+  +
Sbjct: 221 EGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDE 280

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY----- 405
              +L  M++     +   Y+ LI  L   GK  +A +L+ +M     KP+ V Y     
Sbjct: 281 AYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLD 340

Query: 406 ------------------------------SALIDGLCRVGKPDEAEEILFEMINNGCAA 435
                                         + LID LC+VGK DEA   L  M   G A 
Sbjct: 341 KFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAP 400

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  TY++L+ G     +  +A+E++  M           Y + I    + G+  +A   +
Sbjct: 401 NLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTF 460

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
            +M + G  P++VA ++ ++ L   G +EEA + FN +   +    PD  TYNIL+    
Sbjct: 461 EKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGL--KKCGLAPDAITYNILMRCYG 518

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           K   +  +I LL+ M + GCDP++V                      +N L   L+K  R
Sbjct: 519 KAGRVDDAIKLLSEMEENGCDPEVV---------------------IINSLIDTLYKADR 557

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               +K+ + M +  L+P   T+  ++  L +  R+Q A
Sbjct: 558 VDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEA 596



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 112/207 (54%), Gaps = 4/207 (1%)

Query: 134  VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
            +EEA + F  M+D + C      +N ++N   ++G    A E +  +V      I P+  
Sbjct: 909  LEEAKQFFEEMLD-YGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKE---GIRPDLK 964

Query: 194  TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            ++++++  +C +G VD+A+  F E+ +   +PD+  Y  +++GL +  R++EA+ L DEM
Sbjct: 965  SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024

Query: 254  QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
            +  G  P   T+N LI  L   G +  A K+ + + LKG  PN  TYN LI G  + GN 
Sbjct: 1025 RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNP 1084

Query: 314  DKAVSLLDRMVASKCMPNEVTYGTIIN 340
            D+A ++  +M+   C PN  T+  + N
Sbjct: 1085 DRAYAVYKKMMVGGCRPNTGTFAQLPN 1111


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 214/459 (46%), Gaps = 44/459 (9%)

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG------CFPTPVTFN 266
           +L  EM  R   P + T+  L++ LCK  R+DEA+ + D ++  G        P  V FN
Sbjct: 302 ELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFN 361

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGC-LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
            LI+GLCK G+      L++ M +     PN VTYN LI G    GN D+A  L  +M  
Sbjct: 362 TLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNE 421

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               PN +T  T+++GL K GR          M+ +    N   Y+ LIS          
Sbjct: 422 EGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINR 481

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           AM+ +++M+  GC P+ VVY +LI GLC  G+ ++A  ++ ++   G + +   Y+ L+ 
Sbjct: 482 AMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLIS 541

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           GF +  K  +  E+  +M +     + + Y+ LI  L + G    A  V  +M+  G +P
Sbjct: 542 GFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRP 601

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
            VV Y ++IH  C+  +V+E +K+F EM C   K  P+   YNIL++ALC+ +++  +I 
Sbjct: 602 SVVTYGAIIHAYCSKKNVDEGMKIFGEM-CSTSKVPPNTVIYNILIDALCRNNDVDRAIS 660

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
           L+  M  +   P+  T N  L  +++K                                 
Sbjct: 661 LMEDMKVKRVRPNTTTYNAILKGVRDK--------------------------------- 687

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLYG 664
              K L       +R+V+E CRP  I   +   W +  G
Sbjct: 688 ---KMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVG 723



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 216/423 (51%), Gaps = 10/423 (2%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN---ILPNTLTFNLVIKTVCRLGL 207
           + +V +F  ++N + +      AL+ ++ +      N   + P+ + FN +I  +C++G 
Sbjct: 313 RPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGK 372

Query: 208 VDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
            ++ + L  EM + N   P+  TY  L+DG  K    D A  L  +M  +G  P  +T N
Sbjct: 373 EEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLN 432

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
            L++GLCK+G + RA +  + M  KG   N  TY  LI   C   N+++A+   + M++S
Sbjct: 433 TLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSS 492

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
            C P+ V Y ++I+GL   GR  D + V+  ++   F ++   Y+ LISG  K+ K E  
Sbjct: 493 GCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERV 552

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
            +L  +M E G KP+T+ Y+ LI  L + G    A +++ +MI  G   +  TY +++  
Sbjct: 553 YELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHA 612

Query: 447 FFESGKGHKAVEIWKDMAKNNCV-YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           +       + ++I+ +M   + V  N V Y++LI  LC +  +  A  +   M  +  +P
Sbjct: 613 YCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRP 672

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL---LNALCKQSNISH 562
           +   Y++++ G+ +   + +A +L + M  +E   +PD  T  +L   L+A+ +   + H
Sbjct: 673 NTTTYNAILKGVRDKKMLHKAFELMDRM--VEEACRPDYITMEVLTEWLSAVGEIEKLKH 730

Query: 563 SID 565
            ++
Sbjct: 731 FVE 733



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 211/474 (44%), Gaps = 46/474 (9%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL---DEAVLLLDEMQ 254
           +++ + + G   +A+ +  EMP  N    + T   +   L +  R     E V L+ ++ 
Sbjct: 180 LLRVLLKSGRAGDALHVLDEMPQANSGFSV-TGEIVFGELVRSGRSFPDGEVVGLVAKLG 238

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G FP       L+  LC + + G A +++  +   G   +  + N L+  L    ++ 
Sbjct: 239 ERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGRDIK 298

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER------KFHVNEY 368
           +   LL  M   K  P+ VT+G ++N L K  R  +  +V   +  +          +  
Sbjct: 299 RMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVV 358

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQM-MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           +++TLI GL K GK ED + L ++M M    +PNTV Y+ LIDG  + G  D A E+  +
Sbjct: 359 LFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQ 418

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M   G   N  T ++L+ G  + G+ H+AVE + +M       N   Y+ LI   C    
Sbjct: 419 MNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNN 478

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA------LKLFNEMLCLEPKSQ 541
           +  A   + +MLS GC PD V Y S+I GLC AG + +A      LKL    L       
Sbjct: 479 INRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSL------- 531

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
            D   YN+L++  CK+  +    +LL  M + G  PD +T N  ++ L +         D
Sbjct: 532 -DRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKT-------GD 583

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           F              +   K++E M+++ L P   T+  ++   C  K +   +
Sbjct: 584 F--------------ATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGM 623


>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
 gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
          Length = 447

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 220/424 (51%), Gaps = 12/424 (2%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +L + +    +    EFY H +   +     N +++ ++++  C+ G    A++L  EM 
Sbjct: 1   MLQIFVDSKRHRDGYEFYRHRLLGSYA---VNEVSYGILMQGFCKAGEFQQALELLDEMK 57

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
                P++  + T++ GLC   ++ +A+L    +  D C P   T++ L++ LCK+G+  
Sbjct: 58  SNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIGED-CAPNVYTYSTLVDALCKSGQPH 116

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            A  LV  M  KGC PN VTYN LI G      LD+ + LL  M    C  + +TY  I+
Sbjct: 117 EAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMIL 176

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL-FKEG-KAEDAMKLWKQMMEKG 397
           +   K     +  R+L ++E+R    N   Y++L + L   EG +  +A+ L ++M+++G
Sbjct: 177 DIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEG 232

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            +PN V Y  ++  LC+  + DEA ++L  M + GC  +  +Y  L+  F  +G+ + ++
Sbjct: 233 TRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSL 292

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E+   M  +  + +    +V+IH  C+ G L EA  ++  M  RG  P  V Y+++I   
Sbjct: 293 ELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAF 352

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C A   + A+KL ++M  ++   +P+V TYN ++ + C++     +  +   M+D GC P
Sbjct: 353 CKAQQPDTAVKLLHQM--IQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFP 410

Query: 578 DLVT 581
           D V+
Sbjct: 411 DRVS 414



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 188/394 (47%), Gaps = 30/394 (7%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           V++ +L+ G CK GE  +A +L+D M   G  PN V + T+I GLC  G + +A+ L  R
Sbjct: 31  VSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQAL-LHFR 89

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
            +   C PN  TY T+++ L K G+  +   ++  M ++    N   Y+ LI G  K  +
Sbjct: 90  RIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLER 149

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++ + L K+M ++GC+ + + Y+ ++D  C+    DEA    + ++N     N  TY+S
Sbjct: 150 LDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEA----YRLLNALEKRNVVTYNS 205

Query: 443 LMKGF--FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           L       E  +  +A+ + + M +     N+V Y  ++  LC++ +L EA  V   M S
Sbjct: 206 LFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYS 265

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           +GCK D V+Y  ++    NAG   ++L+L   ML        D  T N++++  CK  ++
Sbjct: 266 QGCKTDDVSYKILVVAFANAGRTYDSLELLGRML--GSGYILDTKTMNVVIHKFCKAGDL 323

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  L  SM  RG  P  VT N  + A                       K Q+     
Sbjct: 324 HEAHQLFKSMYQRGSIPSNVTYNTLIGAF---------------------CKAQQPDTAV 362

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           K++  M+Q    P   T+  +++  CR +R + A
Sbjct: 363 KLLHQMIQADFKPNVITYNSIIKSFCREQREEEA 396



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 17/408 (4%)

Query: 76  LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAH 132
           LGSY + + ++  L+Q +  +G+F+    +L  M+       VV+  + I      GK  
Sbjct: 23  LGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGK-- 80

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
            V +A+  F  + ++  C   V +++++++ + + G  H A   Y  +         PN 
Sbjct: 81  -VSQALLHFRRIGED--CAPNVYTYSTLVDALCKSGQPHEA---YGLVTEMVKKGCSPNV 134

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T+N +I    +L  +D  + L +EM  R C  D+ TY  ++D  CK N +DEA  LL+ 
Sbjct: 135 VTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNA 194

Query: 253 MQVDGCFPTPVTFNVLINGL--CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           ++        VT+N L   L   +      A  L++ M  +G  PN+V Y T++  LC  
Sbjct: 195 LEKRNV----VTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKN 250

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             LD+A  +L  M +  C  ++V+Y  ++      GR  D   +L  M    + ++    
Sbjct: 251 SRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTM 310

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + +I    K G   +A +L+K M ++G  P+ V Y+ LI   C+  +PD A ++L +MI 
Sbjct: 311 NVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQ 370

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
                N  TY+S++K F    +  +A  I++ M  N C  + V Y+ L
Sbjct: 371 ADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 191/407 (46%), Gaps = 44/407 (10%)

Query: 147 EFHCKRTVKSF--NSVLNVIIQEGL-----YHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           EF+  R + S+  N V   I+ +G      + +ALE  + +   K   + PN +    +I
Sbjct: 16  EFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEM---KSNGVRPNVVIHTTII 72

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           + +C  G V  A+  FR +   +C P++YTY TL+D LCK  +  EA  L+ EM   GC 
Sbjct: 73  RGLCTAGKVSQALLHFRRIG-EDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCS 131

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA--- 316
           P  VT+N LI+G  K   L     L+  M  +GC  + +TY  ++   C   ++D+A   
Sbjct: 132 PNVVTYNALIDGFRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRL 191

Query: 317 ------------------------------VSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
                                         +SLL++M+     PN+V Y T++  L K  
Sbjct: 192 LNALEKRNVVTYNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNS 251

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           R  +  +VL+SM  +    ++  Y  L+      G+  D+++L  +M+  G   +T   +
Sbjct: 252 RLDEAYQVLLSMYSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMN 311

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            +I   C+ G   EA ++   M   G   +  TY++L+  F ++ +   AV++   M + 
Sbjct: 312 VVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQA 371

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           +   N + Y+ +I   C + +  EAR ++  M+  GC PD V+Y+++
Sbjct: 372 DFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 136/261 (52%), Gaps = 9/261 (3%)

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           NEV+YG ++ G  K G       +L  M+      N  I++T+I GL   GK   A+  +
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           +++ E  C PN   YS L+D LC+ G+P EA  ++ EM+  GC+ N  TY++L+ GF + 
Sbjct: 89  RRIGED-CAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            +  + + + K+M++  C  + + Y++++   C++  + EA  +   +  R    +VV Y
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTY 203

Query: 511 SSMIHGLCNA--GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +S+   L  A      EAL L  +M+  +  ++P+   Y  +L  LCK S +  +  +L 
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMI--QEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLL 261

Query: 569 SMMDRGCDPDLVTCNIFLTAL 589
           SM  +GC  D V+  I + A 
Sbjct: 262 SMYSQGCKTDDVSYKILVVAF 282



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 17/234 (7%)

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
           A N  +Y  LM+GF ++G+  +A+E+  +M  N    N V ++ +I GLC  GK+ +A +
Sbjct: 27  AVNEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQA-L 85

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +  + +   C P+V  YS+++  LC +G   EA  L  EM+  +    P+V TYN L++ 
Sbjct: 86  LHFRRIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMV--KKGCSPNVVTYNALIDG 143

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL------- 606
             K   +   + LL  M  RGC  D++T  + L     K  +  +    LN L       
Sbjct: 144 FRKLERLDEVLMLLKEMSQRGCRADVITYTMILDIFC-KNNSIDEAYRLLNALEKRNVVT 202

Query: 607 ------AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                 A+   +  RT+    ++E M+Q+   P    +  V+  LC+  R+  A
Sbjct: 203 YNSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEA 256



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 91/167 (54%), Gaps = 4/167 (2%)

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           +++ F +S +     E ++     +   NEV Y +L+ G C+ G+ ++A  +  +M S G
Sbjct: 1   MLQIFVDSKRHRDGYEFYRHRLLGSYAVNEVSYGILMQGFCKAGEFQQALELLDEMKSNG 60

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            +P+VV ++++I GLC AG V +AL  F     +     P+V+TY+ L++ALCK      
Sbjct: 61  VRPNVVIHTTIIRGLCTAGKVSQALLHFRR---IGEDCAPNVYTYSTLVDALCKSGQPHE 117

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +  L+  M+ +GC P++VT N  +   + KLE   +    L E++ R
Sbjct: 118 AYGLVTEMVKKGCSPNVVTYNALIDGFR-KLERLDEVLMLLKEMSQR 163


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/389 (31%), Positives = 205/389 (52%), Gaps = 8/389 (2%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
           T TFN++++ +C  G    A++L R+MP     P+  TY T++ G C   R+  A+ ++ 
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 252 EM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGLCL 309
           EM +  G  P   T+  LI+G CK G +  A K+ D M  KG   P+ V YN LI G C 
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G LD A+   + MV         TY  +++ L    RA D   VL  M++  F  + + 
Sbjct: 232 VGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFT 291

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ LI+G  KEG  + A++++++M +KG +   V Y++LI    R G+  E + +    +
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAV 351

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +   Y++L+      G   +A EI  +M K     +++ Y+ L+ G C  G+L 
Sbjct: 352 KKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLD 411

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EAR +  +M  RG +PD+V+Y+++I G    G +++AL++ +EM+  +    P + TYN 
Sbjct: 412 EARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMM--DKGFNPTLMTYNA 469

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           L+  LCK      + +L+  M+ +G  PD
Sbjct: 470 LIQGLCKIRQGDDAENLMKEMVAKGITPD 498



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 126/404 (31%), Positives = 201/404 (49%), Gaps = 11/404 (2%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN +L  +   G   RALE    +         PN +T+N VI   C  G V  A+++ 
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPR-------PNAVTYNTVIAGFCARGRVQAALEVM 170

Query: 216 REMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG-CFPTPVTFNVLINGLC 273
           REM  R    PD YTY TL+ G CK  R+++AV + DEM   G   P+ V +N LI G C
Sbjct: 171 REMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYC 230

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G+L  A +  ++M  +G      TYN L+H L +      A ++L+ M  +   P+  
Sbjct: 231 DVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVF 290

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +ING  K G       V   M ++        Y++LI    ++G+ ++  +L+   
Sbjct: 291 TYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVA 350

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           ++KG +P+ V+Y+ALI+  C  G  + A EI+ EM       +  TY++LM+GF   G+ 
Sbjct: 351 VKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRL 410

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A  +  +M K     + V Y+ LI G    G +++A  V  +M+ +G  P ++ Y+++
Sbjct: 411 DEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNAL 470

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           I GLC     ++A  L  EM+       PD  TY  L+  L  +
Sbjct: 471 IQGLCKIRQGDDAENLMKEMVA--KGITPDDSTYISLIEGLTTE 512



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ ++I  +   G  ++   V+  MR    +  +K ++  +   + K   +E+A+++F  
Sbjct: 149 TYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDE 208

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ +     +   +N+++      G    AL++   +V      I     T+NL++  + 
Sbjct: 209 MLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMV---QRGIAMTVATYNLLMHALF 265

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
                 +A  +  EM      PD++TY  L++G CKE    +A+ + +EM   G   T V
Sbjct: 266 MDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAV 325

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  LI    + G++    +L +    KG  P+ V YN LI+  C  G++++A  ++  M
Sbjct: 326 TYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEM 385

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGK 382
              +  P+++TY T++ G   LGR +D AR L+  M +R    +   Y+TLISG   +G 
Sbjct: 386 EKKRIPPDDMTYNTLMRGFCLLGR-LDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            +DA+++  +MM+KG  P  + Y+ALI GLC++ + D+AE ++ EM+  G   +  TY S
Sbjct: 445 IKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYIS 504

Query: 443 LMKGF 447
           L++G 
Sbjct: 505 LIEGL 509



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 141/303 (46%), Gaps = 26/303 (8%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ ++  L   GK   A++L +QM     +PN V Y+ +I G C  G+   A E++ EM 
Sbjct: 119 FNIMLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMREMR 174

Query: 430 -NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM-AKNNCVYNEVCYSVLIHGLCEDGK 487
              G A + +TY++L+ G+ + G+   AV+++ +M  K     + V Y+ LI G C+ GK
Sbjct: 175 ERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGK 234

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           L  A      M+ RG    V  Y+ ++H L       +A  +  EM   +    PDVFTY
Sbjct: 235 LDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQ--KNGFSPDVFTY 292

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           NIL+N  CK+ N   ++++   M  +G     VT    +     K +  +  TD L  +A
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQE--TDRLFNVA 350

Query: 608 IR------------LFKRQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           ++            L     T G     ++I+  M +K + P   T+  +++  C   R+
Sbjct: 351 VKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRL 410

Query: 652 QAA 654
             A
Sbjct: 411 DEA 413


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 149/525 (28%), Positives = 256/525 (48%), Gaps = 30/525 (5%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +AHLV      F  M+    C   V SFN +++V+  +G   +A+   N +   +    +
Sbjct: 155 RAHLVWS---FFKQMLTSRVCP-NVSSFNILISVLCVQGKLKKAV---NILTMMERNGYV 207

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +++N ++   C+ G    A+ L   M  +  + D+ TY   +D LC+ +R  +  L+
Sbjct: 208 PTIVSYNTLLSWCCKKGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLV 267

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +M+     P  V++N LING  K G++G A ++ + M      PN +TYN LI+G C+
Sbjct: 268 LKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCI 327

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            GN ++A+ +LD M A+   PNEVT GT++NGL K  +      +L      +  +N   
Sbjct: 328 NGNFEEALRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCIS 387

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ +I GL + G  ++A +L  +M + G  P+ + +S LI+G C+VG  ++A+E++ ++ 
Sbjct: 388 HTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIY 447

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   N   +S+L+    + G  ++A++ +  M  N    +    + L+  LCE+GKL 
Sbjct: 448 REGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLV 507

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA      +   G  P+ V +  +I+G  N G    A  +F+ M  +     P  FTY  
Sbjct: 508 EAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRM--ISCGHHPSPFTYGS 565

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           LL  LCK  N   +  LL  +       D ++ N  +      +E  + G   L E A+R
Sbjct: 566 LLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLI------VEISKSGN--LLE-AVR 616

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           LF            E M+Q  + P + T+  ++  L R  R+  A
Sbjct: 617 LF------------EEMIQNNILPDSYTYTCILSGLIREGRLVCA 649



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/479 (27%), Positives = 226/479 (47%), Gaps = 18/479 (3%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N   F+L+I+   R G+V +A+  F  M +R  +P +YT   +M  + K  R        
Sbjct: 104 NPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFF 163

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M      P   +FN+LI+ LC  G+L +A  ++  M   G +P  V+YNTL+   C K
Sbjct: 164 KQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKK 223

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G    A+ L+  M       +  TY   I+ L +  R+  G  VL  M  +    NE  Y
Sbjct: 224 GRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSY 283

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI+G  KEGK   A +++ +M+E    PN + Y+ LI+G C  G  +EA  +L  M  
Sbjct: 284 NTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEA 343

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           N    N  T  +L+ G ++S K   A  I +    N    N + ++V+I GLC +G L E
Sbjct: 344 NDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDE 403

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +  +M   G  PD++ +S +I+G C  G++ +A ++ +++        P+   ++ L
Sbjct: 404 AFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKI--YREGFVPNNVIFSTL 461

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA-IR 609
           +   CK  N+  ++    +M   G + D  TCN  + +L E  +  +   +FL+ ++ I 
Sbjct: 462 IYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVE-AEEFLHHISRIG 520

Query: 610 LFKRQRT--------------SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           L     T              SG F + + M+     P   T+  +++ LC+ +    A
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEA 579



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 134/527 (25%), Positives = 243/527 (46%), Gaps = 36/527 (6%)

Query: 133 LVEEAIRLFHTMV-DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           L++EA +L   M  D  H    + +F+ ++N   + G  ++A E  + I        +PN
Sbjct: 400 LLDEAFQLLIEMCKDGVH--PDIITFSVLINGFCKVGNINKAKEVMSKIYRE---GFVPN 454

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            + F+ +I   C++G V  A++ +  M +     D +T  +L+  LC+  +L EA   L 
Sbjct: 455 NVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLH 514

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
            +   G  P  VTF+ +ING    G+   A  + D M   G  P+  TY +L+  LC   
Sbjct: 515 HISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQ 574

Query: 312 NLDKAVSLLDRMVASKCMP---NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           N  +A  LL ++    C+P   + ++Y T+I  + K G  ++  R+   M +     + Y
Sbjct: 575 NFWEARKLLKKL---HCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSY 631

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP-NTVVYSALIDGLCRVGKPDEAEEILFE 427
            Y+ ++SGL +EG+   A     ++M+K     N++VY+  IDGL + G+   A  +  E
Sbjct: 632 TYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKE 691

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M   G + +    +S+  G+   GK   A  +       N + N   +++L+HG      
Sbjct: 692 MEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQD 751

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +     ++  M   G  P+ + Y S+I GLCN G +E  +K+    + +   S  D  T+
Sbjct: 752 IMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKMLK--MFIAESSTIDDLTF 809

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           N+L+   C+ +++   IDL ++M             +F  +L +  +  +  TD      
Sbjct: 810 NMLIRKCCEINDLDKVIDLTHNM------------EVFRVSLDK--DTQKAVTDV----- 850

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             L +R  +   F  +  ML+K   P +  +  +++ +CR   IQ A
Sbjct: 851 --LVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGA 895



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 131/553 (23%), Positives = 255/553 (46%), Gaps = 28/553 (5%)

Query: 104 MVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
           +VL +MR +     E S+  +   + K   +  A R+F+ M+ E +    + ++N ++N 
Sbjct: 266 LVLKKMRNKMITPNEVSYNTLINGFVKEGKIGVATRVFNEMI-ELNLSPNLITYNILING 324

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
               G +  AL   + ++ A   ++ PN +T   ++  + +    D A  +     +   
Sbjct: 325 YCINGNFEEALRVLD-VMEAN--DVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRT 381

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
             +  ++  ++DGLC+   LDEA  LL EM  DG  P  +TF+VLING CK G + +A +
Sbjct: 382 SLNCISHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKE 441

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           ++  ++ +G +PN V ++TLI+  C  GN+ +A+     M  +    +  T  +++  L 
Sbjct: 442 VMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLC 501

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           + G+ V+    L  +       N   +  +I+G    G    A  ++ +M+  G  P+  
Sbjct: 502 ENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPF 561

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            Y +L+  LC+     EA ++L ++     A +  +Y++L+    +SG   +AV ++++M
Sbjct: 562 TYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEM 621

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP-DVVAYSSMIHGLCNAGS 522
            +NN + +   Y+ ++ GL  +G+L  A +   +++ +     + + Y+  I GL  AG 
Sbjct: 622 IQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQ 681

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
            + AL LF EM   E     D+   N + +   +   +  +  L++   ++   P+L T 
Sbjct: 682 SKAALYLFKEM--EEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTF 739

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           NI        L     G D ++    +L+   R SG F            P   T+  ++
Sbjct: 740 NIL-------LHGYSRGQDIMS--CFKLYNLMRRSGFF------------PNRLTYHSLI 778

Query: 643 QELCRPKRIQAAI 655
             LC    ++  I
Sbjct: 779 LGLCNHGMLELGI 791



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 121/546 (22%), Positives = 246/546 (45%), Gaps = 26/546 (4%)

Query: 67   DEIFNSTPKLGSYQLGDSTFYSLIQ--HYANSGDFKSLEMVLYRMRR--EKRVVLEK--- 119
            D I N    +G      S F  +I   H+ +   + SL  VL + +   E R +L+K   
Sbjct: 529  DCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHC 588

Query: 120  --------SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
                    S+  +     K+  + EA+RLF  M+   +      ++  +L+ +I+EG   
Sbjct: 589  IPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQN-NILPDSYTYTCILSGLIREGRLV 647

Query: 172  RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
             A  F   ++  + + +  N++ +   I  + + G    A+ LF+EM  +    D+    
Sbjct: 648  CAFIFLGRLMQKEILTL--NSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALN 705

Query: 232  TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            ++ DG  +  ++  A  L+ + +     P   TFN+L++G  +  ++    KL + M   
Sbjct: 706  SITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRS 765

Query: 292  GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
            G  PN +TY++LI GLC  G L+  + +L   +A     +++T+  +I    ++      
Sbjct: 766  GFFPNRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKV 825

Query: 352  ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
              +  +ME  +  +++     +   L +   +++      +M++KG  P +  Y  ++  
Sbjct: 826  IDLTHNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKR 885

Query: 412  LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
            +CRVG    A ++  +M+  G + +     ++++G    GK  +A+ I + M +   +  
Sbjct: 886  MCRVGDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPT 945

Query: 472  EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
               ++ L+H  C+    +EA  +   M     K D+VAY+ +I   C  G V  AL  + 
Sbjct: 946  TSTFTTLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYE 1005

Query: 532  EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV------TCNIF 585
            E+   +    P++ TY +L++A+  +  +S    +L  + DRG     +      +C  F
Sbjct: 1006 EI--KQKGLLPNMTTYRVLVSAISTKHYVSRGEIVLKDLNDRGLVSGYLDGKSQKSCRDF 1063

Query: 586  LTALKE 591
            + A+K+
Sbjct: 1064 VVAIKK 1069



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 119/562 (21%), Positives = 228/562 (40%), Gaps = 48/562 (8%)

Query: 70   FNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG 129
            F +   L      + T  SL+     +G     E  L+ + R   V    +F  I   Y 
Sbjct: 477  FYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYA 536

Query: 130  KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
                   A  +F  M+   H   +  ++ S+L V+ +   +  A +        K ++ +
Sbjct: 537  NVGDGSGAFSVFDRMISCGH-HPSPFTYGSLLKVLCKGQNFWEARKLL------KKLHCI 589

Query: 190  P---NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            P   +T+++N +I  + + G +  A++LF EM   N  PD YTY  ++ GL +E RL  A
Sbjct: 590  PLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCA 649

Query: 247  VLLLDE-MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
             + L   MQ +      + +   I+GL K G+   A  L   M  KG   + +  N++  
Sbjct: 650  FIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITD 709

Query: 306  GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
            G    G +  A SL+ +      +PN  T+  +++G  +    +   ++   M    F  
Sbjct: 710  GYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFP 769

Query: 366  NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI- 424
            N   Y +LI GL   G  E  +K+ K  + +    + + ++ LI   C +   D+  ++ 
Sbjct: 770  NRLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLT 829

Query: 425  ----------------------------------LFEMINNGCAANAFTYSSLMKGFFES 450
                                              + EM+  G    +  Y ++MK     
Sbjct: 830  HNMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRV 889

Query: 451  GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
            G    A ++   M       ++     ++ GL   GK+ EA  +  +ML     P    +
Sbjct: 890  GDIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTF 949

Query: 511  SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
            ++++H  C   + +EA  L  ++L    + + D+  YN+L++A C   ++  ++D    +
Sbjct: 950  TTLMHVFCKKDNFKEAHNL--KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEI 1007

Query: 571  MDRGCDPDLVTCNIFLTALKEK 592
              +G  P++ T  + ++A+  K
Sbjct: 1008 KQKGLLPNMTTYRVLVSAISTK 1029



 Score = 43.1 bits (100), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 23/117 (19%)

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
           S P VF  ++L+    +Q  + H+++  +SM+ RG  P + TCN+ + ++ +   A    
Sbjct: 103 SNPAVF--DLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRA---- 156

Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                 L    FK+            ML   + P  S++  ++  LC   +++ A+N
Sbjct: 157 -----HLVWSFFKQ------------MLTSRVCPNVSSFNILISVLCVQGKLKKAVN 196


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 135/410 (32%), Positives = 212/410 (51%), Gaps = 17/410 (4%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-CEPDIYTY 230
           RALE        +   I P+ +TF ++I+  C+  +++ A ++F+EM   N C+PD + Y
Sbjct: 116 RALELM------RDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLY 169

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCF-PTPVTFNVLINGLCKNGELGRAAKLVD-NM 288
             L+DG CKE R+D A+ LL EM+V+    P  V +N +++GLC++     A K +D  M
Sbjct: 170 GVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETM 229

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
            L+GC P  VTY +LI G C    +  AV + + M+  K  P  V+Y  II+GL K GR 
Sbjct: 230 VLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRV 289

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            D  RV+  ME     +N  IY+TLI GL K G  +DA  L++ M   G  PN   Y+ L
Sbjct: 290 YDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATL 349

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           ID  CR  + + A   LF+ I + C  +   Y++++ G     +   A  ++++M     
Sbjct: 350 IDTFCRNDRTETALG-LFDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGV 408

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEAL 527
             +   Y+VL+HG     +  EA  +  ++    GC  +++ Y+++I G C    +E  +
Sbjct: 409 SADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGM 464

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
            LF EM   +    PD  TY+ L++ L     I  + DL   M+  G  P
Sbjct: 465 VLFYEM--RQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSP 512



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 143/503 (28%), Positives = 224/503 (44%), Gaps = 67/503 (13%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP-DIYTYCTLMDGLCKENRLDE 245
           +I P  L+ ++VI   C+ G +  A+ +   M      P + + + +L+D L K  RL +
Sbjct: 55  SIFPGFLS-SVVIDRACKSGDLRGALLILATMLHSGTPPPNQHAFASLIDALSKSTRLAD 113

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM----------FLKGCL- 294
           A   L+ M+  G  P  VTF V+I G CKN  + RA ++   M          FL G L 
Sbjct: 114 AARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLI 173

Query: 295 --------------------------PNEVTYNTLIHGLCLKGNLDKAVSLLDR-MVASK 327
                                     P+ V YN+++ GLC      +A   LD  MV   
Sbjct: 174 DGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQG 233

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C P  VTY ++I G  K  +     R+  +M ERK       YS +I GL K G+  DA 
Sbjct: 234 CSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAY 293

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
           ++ ++M   GC+ N V+Y+ LIDGLC+ G  D+A  +   M  +G   N  TY++L+  F
Sbjct: 294 RVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTF 353

Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
             + +   A+ ++ D  ++ C  +   Y+ ++ GLC + +L +AR ++ +M   G   D 
Sbjct: 354 CRNDRTETALGLF-DHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADT 412

Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
            AY+ ++HG   +   EEA ++  E L  +P    ++ TYN ++   C +S +     L 
Sbjct: 413 HAYNVLLHGAFRSERPEEAFRILEE-LGDDPGCVANLLTYNTVIAGCCLESGMV----LF 467

Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVML 627
             M  RG  PD  T +  +                      RL         F + E ML
Sbjct: 468 YEMRQRGIAPDFATYSALID---------------------RLLGSGEIGRAFDLCEEML 506

Query: 628 QKFLSPQTSTWERVVQELCRPKR 650
              LSP +    RVV  LC  +R
Sbjct: 507 ASGLSPPSGVLGRVVARLCWSRR 529



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 180/442 (40%), Gaps = 69/442 (15%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            F SLI   + S         L  MR         +F  + + + K  ++E A  +F  M
Sbjct: 97  AFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEM 156

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C+     +  +++   +E    RALE    +   +   I P+ + +N ++  +CR
Sbjct: 157 IKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERR--IQPDVVIYNSIVDGLCR 214

Query: 205 LGLVDNAIQLFRE-MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
                 A +   E M ++ C P + TY +L+ G CK  ++  AV + + M      PT V
Sbjct: 215 SNRFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIV 274

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           +++V+I+GL K G +  A ++V  M   GC  N V Y TLI GLC  G LD A +L   M
Sbjct: 275 SYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIM 334

Query: 324 VASKCMPNEVTYGTIINGLVK-------LG--------------------------RAVD 350
             S   PN+ TY T+I+   +       LG                          R +D
Sbjct: 335 KRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTAVVSGLCRERRLD 394

Query: 351 GARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDA----------------------- 386
            AR L   M       + + Y+ L+ G F+  + E+A                       
Sbjct: 395 DARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTV 454

Query: 387 ---------MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
                    M L+ +M ++G  P+   YSALID L   G+   A ++  EM+ +G +  +
Sbjct: 455 IAGCCLESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPS 514

Query: 438 FTYSSLMKGFFESGKGHKAVEI 459
                ++     S +G  A ++
Sbjct: 515 GVLGRVVARLCWSRRGDLAAKV 536



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 144/307 (46%), Gaps = 10/307 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + +   KA  ++ A+R+++ M+ E   + T+ S++ +++ + + G   R  + Y  
Sbjct: 240 TYTSLIRGACKAKKMKLAVRIWNAML-ERKIQPTIVSYSVIIDGLSKAG---RVYDAYRV 295

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   + +    N + +  +I  +C+ G +D+A  L+R M      P+  TY TL+D  C+
Sbjct: 296 VREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCR 355

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            +R + A+ L D ++ D C      +  +++GLC+   L  A  L   M L G   +   
Sbjct: 356 NDRTETALGLFDHIR-DYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHA 414

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           YN L+HG       ++A  +L+ +     C+ N +TY T+I G         G  +   M
Sbjct: 415 YNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEM 470

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +R    +   YS LI  L   G+   A  L ++M+  G  P + V   ++  LC   + 
Sbjct: 471 RQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRG 530

Query: 419 DEAEEIL 425
           D A +++
Sbjct: 531 DLAAKVI 537



 Score = 63.5 bits (153), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 99/272 (36%), Gaps = 70/272 (25%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  I     KA  V +A R+   M +   C+  V  + ++++ + + G    A   Y  
Sbjct: 275 SYSVIIDGLSKAGRVYDAYRVVREM-ETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRI 333

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCR-------LGL------------------------- 207
           +   K     PN  T+  +I T CR       LGL                         
Sbjct: 334 M---KRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTAVVSGLCRE 390

Query: 208 --VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD-GCFPTPVT 264
             +D+A  LFREM +     D + Y  L+ G  +  R +EA  +L+E+  D GC    +T
Sbjct: 391 RRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLT 450

Query: 265 FNVLINGLC-------------------------------KNGELGRAAKLVDNMFLKGC 293
           +N +I G C                                +GE+GRA  L + M   G 
Sbjct: 451 YNTVIAGCCLESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGL 510

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
            P       ++  LC     D A  +++  +A
Sbjct: 511 SPPSGVLGRVVARLCWSRRGDLAAKVIEMAMA 542


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 208/395 (52%), Gaps = 6/395 (1%)

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           A+  +      T+N  +  + + G    A ++F +M  + C P+IYTY  ++ GLC + +
Sbjct: 28  ARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAK 87

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            D A+ LL +M+     PT    N+L++ LCKNG++  A +L   +    C  + ++YN 
Sbjct: 88  TDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYNM 146

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           L +GLC    +D+A+++   M  +  +P+ +TY  ++ G  + GR      +L  M E K
Sbjct: 147 LTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGK 206

Query: 363 ----FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
                  + Y Y+T+ISG  K  +   A  + ++M++ GC PN V ++ L+DGLC  GK 
Sbjct: 207 KGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKL 266

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           DEA  +   M+   C   A TY+ L+ G   + +  KA + + DM +     N   Y+ L
Sbjct: 267 DEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTAL 326

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE-MLCLE 537
           I GLC+  K+ +A  +  +M S G +P+VV Y+ +I  LC  G +E A KLFN+ M    
Sbjct: 327 IGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRT 386

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
            K +PD + Y+ ++  LC+QS    + +    M++
Sbjct: 387 AKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVE 421



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 218/416 (52%), Gaps = 11/416 (2%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A R+F     +   + TV ++N+ LN +++ G   +A + ++ ++   +   LPN  T+ 
Sbjct: 20  ASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDML---YKECLPNIYTYG 76

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           +V++ +C     D A++L ++M  +   P  +    L+  LCK  ++D A  L   +  D
Sbjct: 77  IVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-D 135

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            C    +++N+L  GLCK  ++ RA  +   M     +P+ +TYN L++G C  G +++A
Sbjct: 136 ECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQA 195

Query: 317 VSLLDRMV----ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           ++LL+ M+     S  +P+  +Y T+I+G  K  +      VL  M +     N   ++T
Sbjct: 196 MTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNT 255

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ GL   GK ++A  +++ M+E+ C+P  V Y+ LI G  R  + D+A +   +M+  G
Sbjct: 256 LLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRG 315

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N +TY++L+ G  ++ K   A+EI K M+      N V Y+ +I  LC+ G++  A 
Sbjct: 316 VEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERAT 375

Query: 493 MVWTQML---SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
            ++   +   +  CKPD  AYS++++ LC      EA + F  M+  +  ++P ++
Sbjct: 376 KLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIY 431



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 220/437 (50%), Gaps = 33/437 (7%)

Query: 122 IFIFKAYGKAHLVE-----EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
           +F + AY  A LV+     +A ++F  M+ +  C   + ++  VL  +  +     ALE 
Sbjct: 37  VFTYNAYLNA-LVKGGHGSKARKIFDDMLYK-ECLPNIYTYGIVLRGLCDDAKTDAALEL 94

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
              + + +   + P T   N+++  +C+ G VD A +L++ +    C  D  +Y  L  G
Sbjct: 95  ---LQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYNMLTYG 150

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF--LKG-- 292
           LCK +++D A+ +  EM+ +   P+ +T+N L+ G C+ G + +A  L++ M    KG  
Sbjct: 151 LCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSD 210

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +P+  +YNT+I G C    L  A  +L RM+ S C PN VT+ T+++GL   G+  +  
Sbjct: 211 VVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEAN 270

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M ER        Y+ LI+G  +  + + A   +  M+ +G +PN   Y+ALI GL
Sbjct: 271 AMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGL 330

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN---NCV 469
           C   K ++A EIL  M + G   N  TY+ ++    + G+  +A +++ D   +    C 
Sbjct: 331 CDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCK 390

Query: 470 YNEVCYSVLIHGLCEDGKLREA-----RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
            +   YS +++ LC   K  EA     RMV +++++   KP +  Y +M  GL     V+
Sbjct: 391 PDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVA---KPHI--YKAMADGL---ELVQ 442

Query: 525 EALKLFNEMLCLEPKSQ 541
           E  K+  E +CLE  + 
Sbjct: 443 ETEKV--ERVCLEASAH 457



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 153/311 (49%), Gaps = 7/311 (2%)

Query: 128 YG--KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           YG  KA  ++ A+ +F  M +E     ++ ++N +L    + G   +A+     ++  K 
Sbjct: 149 YGLCKADQIDRALAVFGEM-EENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKK 207

Query: 186 -MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
             +++P+  ++N VI   C+   +  A  + R M    C P++ T+ TL+DGLC   +LD
Sbjct: 208 GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLD 267

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  + + M    C PT VT+ VLI G  +   + +A     +M  +G  PN  TY  LI
Sbjct: 268 EANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALI 327

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL---MSMEER 361
            GLC    ++ A+ +L RM ++   PN VTY  +I  L K G+     ++    M     
Sbjct: 328 GGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTA 387

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
           K   + Y YST++  L ++ K  +A + + +M+E        +Y A+ DGL  V + ++ 
Sbjct: 388 KCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQETEKV 447

Query: 422 EEILFEMINNG 432
           E +  E   +G
Sbjct: 448 ERVCLEASAHG 458



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 162/340 (47%), Gaps = 23/340 (6%)

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY   +N LVK G      ++   M  ++   N Y Y  ++ GL  + K + A++L + M
Sbjct: 39  TYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM 98

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             K   P T + + L+  LC+ GK D A E L++ +++ C+ +  +Y+ L  G  ++ + 
Sbjct: 99  ESKMLTPTTFIVNMLVSCLCKNGKVDAAYE-LYKRLSDECSLDRISYNMLTYGLCKADQI 157

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS--RGCK--PDVVA 509
            +A+ ++ +M +N  V + + Y+ L++G C  G++ +A  +  +M+   +G    PD+ +
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYS 217

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+++I G C A  +  A  +   M+  +    P+V T+N LL+ LC    +  +  +   
Sbjct: 218 YNTVISGFCKARQLPTARYVLRRMI--KSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEY 275

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQ 614
           M++R C+P  VT  + +T     L   +   D+  ++  R               L    
Sbjct: 276 MVERNCEPTAVTYTVLITGHARALRIDK-ANDYFVDMLRRGVEPNVYTYTALIGGLCDAN 334

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +     +I++ M      P   T+ RV+  LC+  +I+ A
Sbjct: 335 KVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERA 374



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 3/235 (1%)

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
           +  +  F    + Y+  ++ L K G    A K++  M+ K C PN   Y  ++ GLC   
Sbjct: 27  AARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDA 86

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K D A E+L +M +       F  + L+    ++GK   A E++K ++ + C  + + Y+
Sbjct: 87  KTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYN 145

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +L +GLC+  ++  A  V+ +M      P ++ Y+ +++G C AG +E+A+ L  EM+  
Sbjct: 146 MLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEG 205

Query: 537 EPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +  S   PD+++YN +++  CK   +  +  +L  M+  GC P++VT N  L  L
Sbjct: 206 KKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGL 260


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 138/493 (27%), Positives = 251/493 (50%), Gaps = 15/493 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  +   + K   V+ A   F  M+ ++     V S+N +L+ +   G    ALEF N 
Sbjct: 272 SFNALMSGFCKMGSVDVAKSFFCMMI-KYGLLPDVYSYNILLHGLCVAGSMEEALEFTND 330

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + N     + P+ +T+N++      LGL+  A ++ + M +    PD+ TY  L+ G C+
Sbjct: 331 MENH---GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              ++E+  L ++M   G   + VT+ VL++ LCK+G +  A  L+  M + G  P+ +T
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+        +G +++A+ L + M + +  PN      II+GL + G   +      S+ 
Sbjct: 448 YS--------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 499

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +        +Y+ +I G  K G   +A++ +KQ++EKG  P  V +++LI G C+ GK  
Sbjct: 500 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 559

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA ++L  +  +G    + TY++LM G+ E G  H   ++  +M        ++ Y+V++
Sbjct: 560 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 619

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            GLC++G+L E+  +   M +RG  PD + Y+++I   C A  +++A +L N+ML  +  
Sbjct: 620 KGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQML--QHS 677

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
            QP   TYN+L+N LC   N+  +  LL ++ D+      V     + A   K +  Q+ 
Sbjct: 678 LQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV-QNA 736

Query: 600 TDFLNELAIRLFK 612
             F +++  R F+
Sbjct: 737 LVFFHQMVERGFE 749



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 210/427 (49%), Gaps = 29/427 (6%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ ++FN ++   C++G VD A   F  M      PD+Y+Y  L+ GLC    ++EA+  
Sbjct: 268 PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEF 327

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            ++M+  G  P  VT+N+L NG    G +  A K+V  M L G  P+ VTY  LI G C 
Sbjct: 328 TNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQ 387

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME---------- 359
            GN++++  L ++M++     + VTY  +++ L K GR  +   +L  ME          
Sbjct: 388 MGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 360 -----------------ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
                             ++ + N ++ S +ISGLF++G   +A   +  + +       
Sbjct: 448 YSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 507

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           ++Y+ +IDG  ++G   EA     ++I  G +    T++SL+ GF + GK  +AV++   
Sbjct: 508 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 567

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           +  +  V   V Y+ L++G CE+G +     +  +M ++  KP  + Y+ ++ GLC  G 
Sbjct: 568 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGR 627

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           + E+++L   M        PD  TYN ++ + CK  ++  +  L N M+     P  VT 
Sbjct: 628 LHESVQLLKYMYA--RGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTY 685

Query: 583 NIFLTAL 589
           N+ +  L
Sbjct: 686 NVLINGL 692



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 222/456 (48%), Gaps = 26/456 (5%)

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           ++ E+       + YT   L+DGLC+++RL +AV  L E   +   P+ V+FN L++G C
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G +  A      M   G LP+  +YN L+HGLC+ G++++A+   + M      P+ V
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIV 341

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  + NG   LG      +V+  M     + +   Y+ LI G  + G  E++ KL ++M
Sbjct: 342 TYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKM 401

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + +G K + V Y+ L+  LC+ G+ DEA  +L EM   G   +  TYS         G  
Sbjct: 402 LSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS--------RGAV 453

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+E++++M       N    S +I GL E G + EA+M +  +       +++ Y+ M
Sbjct: 454 EEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIM 513

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I G    G++ EA++ + ++  +E    P + T+N L+   CK+  ++ ++ LL+++   
Sbjct: 514 IDGYAKLGNIGEAVRSYKQI--IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVH 571

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL---AIR------------LFKRQRTSG 618
           G  P  VT    +    E+ +      D L+E+   AI+            L K  R   
Sbjct: 572 GLVPTSVTYTTLMNGYCEEGDM-HSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHE 630

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             ++++ M  + L P   T+  V+Q  C+   +Q A
Sbjct: 631 SVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKA 666



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 209/427 (48%), Gaps = 29/427 (6%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T+ ++I   C++G ++ + +L  +M  +  +  I TY  L+  LCK  R+DEAV+L
Sbjct: 373 PDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVIL 432

Query: 250 LDEMQVDGCFPTPVTFN---------------------------VLINGLCKNGELGRAA 282
           L EM+V G  P  +T++                            +I+GL + G +  A 
Sbjct: 433 LHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQ 492

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
              D++         + YN +I G    GN+ +AV    +++     P  VT+ ++I G 
Sbjct: 493 MYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGF 552

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K G+  +  ++L +++          Y+TL++G  +EG       +  +M  K  KP  
Sbjct: 553 CKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQ 612

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           + Y+ ++ GLC+ G+  E+ ++L  M   G   +  TY+++++ F ++    KA ++   
Sbjct: 613 ITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQ 672

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +++   + V Y+VLI+GLC  G L++A  +   +  +  +   VAY+++I   C  G 
Sbjct: 673 MLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGD 732

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           V+ AL  F++M+  E   +  +  Y+ ++N LCK++ I+ +      M+  G  PD   C
Sbjct: 733 VQNALVFFHQMV--ERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDIC 790

Query: 583 NIFLTAL 589
            + L A 
Sbjct: 791 LVMLNAF 797



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 194/415 (46%), Gaps = 12/415 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  +  K+  ++EA+ L H M +    K  + +++         G    A+E Y  
Sbjct: 412 TYTVLLSSLCKSGRIDEAVILLHEM-EVIGLKPDLLTYS--------RGAVEEAIELYEE 462

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + + +   I PN+   + +I  +   G +  A   F  +   +   +I  Y  ++DG  K
Sbjct: 463 MCSKR---IYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAK 519

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              + EAV    ++   G  PT VTFN LI G CK G+L  A KL+D + + G +P  VT
Sbjct: 520 LGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVT 579

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y TL++G C +G++     +L  M A    P ++TY  ++ GL K GR  +  ++L  M 
Sbjct: 580 YTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMY 639

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            R    ++  Y+T+I    K    + A +L  QM++   +P+ V Y+ LI+GLC  G   
Sbjct: 640 ARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLK 699

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A+ +L  + +         Y++++K     G    A+  +  M +     +   YS +I
Sbjct: 700 DADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVI 759

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           + LC+   + +A+  +  ML+ G  PD      M++    +G      ++F  M+
Sbjct: 760 NRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMI 814



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/341 (28%), Positives = 170/341 (49%), Gaps = 20/341 (5%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
           F +  K+ + EE I L++ M+D +                 + G    A+  Y  I+   
Sbjct: 495 FDSVTKSDVAEEII-LYNIMIDGY----------------AKLGNIGEAVRSYKQIIEK- 536

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              I P  +TFN +I   C+ G +  A++L   + V    P   TY TLM+G C+E  + 
Sbjct: 537 --GISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMH 594

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
               +L EM+     PT +T+ V++ GLCK G L  + +L+  M+ +G  P+++TYNT+I
Sbjct: 595 SMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVI 654

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
              C   +L KA  L ++M+     P+ VTY  +INGL   G   D  R+L++++++   
Sbjct: 655 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIR 714

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           + +  Y+T+I     +G  ++A+  + QM+E+G + +   YSA+I+ LC+     +A+  
Sbjct: 715 LTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFF 774

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
              M+ +G   +      ++  F  SG  +   EI+  M K
Sbjct: 775 FCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIK 815



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 147/309 (47%), Gaps = 4/309 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +   Y K   + EA+R +  ++++     T+ +FNS++    ++G    A++  + I   
Sbjct: 513 MIDGYAKLGNIGEAVRSYKQIIEK-GISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI--- 568

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   ++P ++T+  ++   C  G + +   +  EM  +  +P   TY  ++ GLCKE RL
Sbjct: 569 KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 628

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            E+V LL  M   G FP  +T+N +I   CK  +L +A +L + M      P+ VTYN L
Sbjct: 629 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVL 688

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I+GLC+ GNL  A  LL  +        +V Y TII      G   +       M ER F
Sbjct: 689 INGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGF 748

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            V+   YS +I+ L K     DA   +  M+  G  P+  +   +++   R G P+   E
Sbjct: 749 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 808

Query: 424 ILFEMINNG 432
           I   MI  G
Sbjct: 809 IFAMMIKCG 817



 Score = 52.4 bits (124), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 43/246 (17%), Positives = 105/246 (42%), Gaps = 4/246 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  Y   GD  S+  +L+ M  +     + ++  + K   K   + E+++L   M
Sbjct: 579 TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM 638

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    + ++N+V+    +     +A + +N ++     ++ P+ +T+N++I  +C 
Sbjct: 639 YARGLFPDQI-TYNTVIQSFCKAHDLQKAFQLHNQMLQH---SLQPSPVTYNVLINGLCV 694

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G + +A +L   +  ++       Y T++   C +  +  A++   +M   G   +   
Sbjct: 695 YGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRD 754

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ +IN LCK   +  A      M   G  P++     +++     G+ +    +   M+
Sbjct: 755 YSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMI 814

Query: 325 ASKCMP 330
               +P
Sbjct: 815 KCGLLP 820


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 212/404 (52%), Gaps = 2/404 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP+ + F+ ++  + +L   +  I LFR + +     D+Y++ TL+D  C+  RL  A+ 
Sbjct: 76  LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
            L +M   G  P+ VTF  L+NG C       A  LVD +   G  PN V YNT+I  LC
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            KG ++ A+ +L  M      P+ VTY ++I  L   G     AR+L  M       +  
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            +S LI    KEG+  +A K + +M+++   PN V Y++LI+GLC  G  DEA+++L  +
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           ++ G   NA TY++L+ G+ ++ +    ++I   M+++    +   Y+ L  G C+ GK 
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  V  +M+S G  PD+  ++ ++ GLC+ G + +AL    ++   + K+   + TYN
Sbjct: 376 SAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL--QKSKTVVGIITYN 433

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           I++  LCK   +  +  L  S+  +G  PD++T    +  L+ K
Sbjct: 434 IIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 213/419 (50%), Gaps = 6/419 (1%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A+ LF  M  E H   ++  F+ +L  I +   Y   +  + H+   + + I  +  +F
Sbjct: 62  DALTLFCDMA-ESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHL---EMLGISHDLYSF 117

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
             +I   CR   +  A+    +M     EP I T+ +L++G C  NR  EA+ L+D++  
Sbjct: 118 TTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVG 177

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            G  P  V +N +I+ LC+ G++  A  ++ +M   G  P+ VTYN+LI  L   G    
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           +  +L  M+     P+ +T+  +I+   K G+ ++  +    M +R  + N   Y++LI+
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL   G  ++A K+   ++ KG  PN V Y+ LI+G C+  + D+  +IL  M  +G   
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           + FTY++L +G+ ++GK   A ++   M       +   +++L+ GLC+ GK+ +A +  
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
             +        ++ Y+ +I GLC A  VE+A  LF   L L+  S PDV TY  ++  L
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCS-LALKGVS-PDVITYITMMIGL 474



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 183/344 (53%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +TF  ++   C +     A+ L  ++     EP++  Y T++D LC++ +++ A+ +
Sbjct: 147 PSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDV 206

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  M+  G  P  VT+N LI  L  +G  G +A+++ +M   G  P+ +T++ LI     
Sbjct: 207 LKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGK 266

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G L +A    + M+     PN VTY ++INGL   G   +  +VL  +  + F  N   
Sbjct: 267 EGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVT 326

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  K  + +D MK+   M   G   +T  Y+ L  G C+ GK   AE++L  M+
Sbjct: 327 YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMV 386

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   + +T++ L+ G  + GK  KA+   +D+ K+  V   + Y+++I GLC+  K+ 
Sbjct: 387 SCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVE 446

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +A  ++  +  +G  PDV+ Y +M+ GL       EA +L+ +M
Sbjct: 447 DAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 153/311 (49%), Gaps = 3/311 (0%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N++++ + ++G  + AL+   H+   K M I P+ +T+N +I  +   G    + ++  
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHM---KKMGIRPDVVTYNSLITRLFHSGTWGVSARILS 243

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M      PD+ T+  L+D   KE +L EA    +EM      P  VT+N LINGLC +G
Sbjct: 244 DMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHG 303

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L  A K+++ +  KG  PN VTYNTLI+G C    +D  + +L  M       +  TY 
Sbjct: 304 LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYN 363

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+  G  + G+     +VL  M     H + Y ++ L+ GL   GK   A+   + + + 
Sbjct: 364 TLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKS 423

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
                 + Y+ +I GLC+  K ++A  +   +   G + +  TY ++M G        +A
Sbjct: 424 KTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREA 483

Query: 457 VEIWKDMAKNN 467
            E+++ M K +
Sbjct: 484 HELYRKMQKED 494


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 144/504 (28%), Positives = 238/504 (47%), Gaps = 41/504 (8%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKR--TVKSFNSVLNVIIQEGLYHRALEFYN 178
           F  I K + +  + + A+ +F  M     C R  +++S NS+L+ ++Q G   +AL  Y 
Sbjct: 189 FDMILKVFAEKGMTKFALCVFDNM---GKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYE 245

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
            ++    + ILP+  ++ +++   C+ G VD A    +EM    CEP++ TY +L+DG  
Sbjct: 246 QMI---ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYV 302

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
               +  A  +L  M   G      T+ +LI G CK G++ +A KL+  M  K    +E 
Sbjct: 303 SLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEH 362

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            Y  LIH  C  G +D A+ + D M+      N V   ++ING  KLG     A VL+SM
Sbjct: 363 VYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSM 422

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           ++     + Y Y+TL+ G  K+     A KL  +M  KG     V Y+ L+  L  VG  
Sbjct: 423 KDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHV 482

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           + A  I   M   G A N  TY +L+  FF+ G   +A+ IWKD        +   Y+ +
Sbjct: 483 EHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTM 542

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL--------- 529
           I G C+  KL +A+ ++ +M   G  PD + Y ++I G C  G++ EALKL         
Sbjct: 543 ICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGI 602

Query: 530 ------FNEMLCLEPKSQ------------------PDVFTYNILLNALCKQSNISHSID 565
                 +N ++    +S+                  P+V TY  L+   C +  +  + +
Sbjct: 603 SSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYN 662

Query: 566 LLNSMMDRGCDPDLVTCNIFLTAL 589
               M+D+G  P+++  +  +++L
Sbjct: 663 AYFKMIDKGIAPNIIIGSKIVSSL 686



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 167/661 (25%), Positives = 281/661 (42%), Gaps = 101/661 (15%)

Query: 58  NAKSEQPFSDEIFNSTPKL--GSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
           NA  ++   DE FN   ++     +    T+ SLI  Y + GD    + VL  M  +   
Sbjct: 264 NAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIP 323

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
              +++  + K Y K   +E+A +L   M+++ +       +  +++     G    AL 
Sbjct: 324 ENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEK-NLFVDEHVYGVLIHAYCTAGRVDDALR 382

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
             + ++    + +  NT+  N +I   C+LG V+ A ++   M   N +PD Y Y TL+D
Sbjct: 383 IRDAMLK---VGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLD 439

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           G CK+    +A  L DEM   G   T VT+N L+  L   G +  A  + + M  +G  P
Sbjct: 440 GFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAP 499

Query: 296 NEVTYNTLIHGLCLKGNLDKA---------------VSLLDRMVASKCM----------- 329
           NEVTY TL+      G  D+A               ++L + M+   C            
Sbjct: 500 NEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIF 559

Query: 330 ---------PNEVTYGTIINGLVKLGRAVDGARVLMSMEERK-FHVNEYIYSTLISGLFK 379
                    P+E+TY T+I+G  K+G  V+  + L  M ER     +  +Y++LI+G+F+
Sbjct: 560 LKMKELGFPPDEITYRTLIDGYCKVGNLVEALK-LKDMSERDGISSSTEMYNSLITGVFR 618

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             + +    L  +M  +   PN V Y +LI G C  G  D+A    F+MI+ G A N   
Sbjct: 619 SEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIII 678

Query: 440 YSSLMKGFFESGK-----------------------------------GHKAVEIWKDMA 464
            S ++   +  GK                                     K V+ +   A
Sbjct: 679 GSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKA 738

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
            +  + N + Y++ I GLC+   + + R + + +L +G  PD   Y S+IH     G V 
Sbjct: 739 MSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVN 798

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EA  L ++M  +     P++  YN L+N LCK  N+  +  L N +  +G  P +VT N 
Sbjct: 799 EAFCLRDDM--INAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNT 856

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            +           DG            K  RT+   ++ + M ++ + P + T+  ++  
Sbjct: 857 LI-----------DG----------YCKGGRTTEALELKDKMREEGICPSSITYSTLIHG 895

Query: 645 L 645
           L
Sbjct: 896 L 896



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 219/479 (45%), Gaps = 46/479 (9%)

Query: 135 EEAIRLFHTMVDEFHCKR---TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH-MNILP 190
           E+ I+ F  + DE H K    TV ++N++L  +   G    AL    HI N  H   + P
Sbjct: 445 EDFIKAFK-LCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHAL----HIWNLMHKRGVAP 499

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N +T+  ++    ++G  D A+ ++++   +     I  Y T++ G CK  +L +A  + 
Sbjct: 500 NEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIF 559

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M+  G  P  +T+  LI+G CK G L  A KL D     G   +   YN+LI G+   
Sbjct: 560 LKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRS 619

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
             L K   LL  M   +  PN VTYG++I G    G           M ++    N  I 
Sbjct: 620 EELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIG 679

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEK-----------------------------GCKP- 400
           S ++S L++ GK ++A  +  Q+ +                              G K  
Sbjct: 680 SKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAM 739

Query: 401 -----NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
                N +VY+  I GLC+    D+   IL +++  G   + +TY SL+      GK ++
Sbjct: 740 SIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNE 799

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A  +  DM     V N V Y+ LI+GLC+ G L  AR ++ ++  +G  P VV Y+++I 
Sbjct: 800 AFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLID 859

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           G C  G   EAL+L ++M   E    P   TY+ L++ L  +     S+ LLN MM  G
Sbjct: 860 GYCKGGRTTEALELKDKMR--EEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 202/436 (46%), Gaps = 39/436 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           VE A+ +++ M         V ++ ++L+   + G + RA+  +    +A       +  
Sbjct: 482 VEHALHIWNLMHKRGVAPNEV-TYCTLLDAFFKVGTFDRAMMIWK---DALSKGFTKSIT 537

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N +I   C++  +  A ++F +M      PD  TY TL+DG CK   L EA+ L D  
Sbjct: 538 LYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMS 597

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           + DG   +   +N LI G+ ++ EL +   L+  M  +   PN VTY +LI G C KG +
Sbjct: 598 ERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMM 657

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG--------------------------- 346
           DKA +   +M+     PN +    I++ L + G                           
Sbjct: 658 DKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVEL 717

Query: 347 -----RAVDGARVLMSMEERKFHV---NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
                R ++  +++ S  ++   +   N  +Y+  I+GL K    +D  ++   ++ KG 
Sbjct: 718 PKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGF 777

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+   Y +LI     VGK +EA  +  +MIN G   N   Y++L+ G  +SG   +A  
Sbjct: 778 CPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARR 837

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++  +A+       V Y+ LI G C+ G+  EA  +  +M   G  P  + YS++IHGL 
Sbjct: 838 LFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLY 897

Query: 519 NAGSVEEALKLFNEML 534
             G  E+++ L NEM+
Sbjct: 898 MEGKSEQSVGLLNEMM 913



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 171/385 (44%), Gaps = 23/385 (5%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQV--------------------DGCFPTPVT 264
           PD+ +YC ++  L +     E  + L+E+ V                    +  F +P  
Sbjct: 130 PDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSF-SPTV 188

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           F++++    + G    A  + DNM   G +P+  + N+L+  L   G   KA+ + ++M+
Sbjct: 189 FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMI 248

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           A   +P+  +Y  ++N   K GR  +    +  ME      N   Y++LI G    G   
Sbjct: 249 ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVC 308

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A K+   M EKG   N+  Y+ LI G C+ G+ ++AE+++  M+      +   Y  L+
Sbjct: 309 GAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLI 368

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             +  +G+   A+ I   M K     N V  + LI+G C+ G + +A  V   M     K
Sbjct: 369 HAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLK 428

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD   Y++++ G C      +A KL +EM          V TYN LL  L    ++ H++
Sbjct: 429 PDSYGYNTLLDGFCKQEDFIKAFKLCDEM--HNKGVNFTVVTYNTLLKNLFHVGHVEHAL 486

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTAL 589
            + N M  RG  P+ VT    L A 
Sbjct: 487 HIWNLMHKRGVAPNEVTYCTLLDAF 511


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 147/506 (29%), Positives = 252/506 (49%), Gaps = 42/506 (8%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           +L+F  ++V+  +    P+  +FN V+  VC+LG V  A  +   MP   CEPD+ +Y +
Sbjct: 40  SLKFLAYLVSRGYT---PHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNS 96

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDG---CFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           L+DG C+   +  A L+L+ ++      C P  V+FN L NG  K        K++D +F
Sbjct: 97  LIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK-------MKMLDEVF 149

Query: 290 ------LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
                 LK C PN VTY+T I   C  G L  A+     M      PN VT+  +I+G  
Sbjct: 150 VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYC 209

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K G       +   M   +  +N   Y+ LI G  K+G+ + A +++ +M+E   +PN++
Sbjct: 210 KAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           VY+ +IDG  + G  D A + L +M+N G   +   Y  ++ G   +GK  +A EI +DM
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            K++ V + V ++ +++   + G+++ A  ++ +++ RG +PDVVA S+MI G+   G +
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD----- 578
            EA+  F    C+E  +  DV  Y +L++ALCK+ +      L + + + G  PD     
Sbjct: 390 HEAIVYF----CIEKAN--DVM-YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYT 442

Query: 579 -----LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF-----KIVEVMLQ 628
                L      + A K K    Q+G   L+ LA         S G      ++ + ML 
Sbjct: 443 SWIAGLCKQGNLVDAFKLKTRMVQEGL-LLDLLAYTTLIYGLASKGLMVEARQVFDEMLN 501

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAA 654
             +SP ++ ++ +++   +   + AA
Sbjct: 502 SGISPDSAVFDLLIRAYEKEGNMAAA 527



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/497 (28%), Positives = 250/497 (50%), Gaps = 21/497 (4%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIFIFKAYG---KAHLVEEA 137
           S+F S++      G  K  E +++ M R   E  V+   S I      G    A LV E+
Sbjct: 57  SSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLES 116

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
           +R  H     F CK  + SFNS+ N   +  +      +   ++        PN +T++ 
Sbjct: 117 LRASHG----FICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCS----PNVVTYST 168

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
            I T C+ G +  A++ F  M      P++ T+  L+DG CK   L+ AV L  EM+   
Sbjct: 169 WIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVR 228

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
                VT+  LI+G CK GE+ RA ++   M      PN + Y T+I G   +G+ D A+
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAM 288

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
             L +M+      +   YG II+GL   G+  +   ++  ME+     +  I++T+++  
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAY 348

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
           FK G+ + A+ ++ +++E+G +P+ V  S +IDG+ + G+  EA  I++  I     AN 
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA--IVYFCIEK---AND 403

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             Y+ L+    + G   +   ++  +++   V ++  Y+  I GLC+ G L +A  + T+
Sbjct: 404 VMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTR 463

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M+  G   D++AY+++I+GL + G + EA ++F+EML       PD   +++L+ A  K+
Sbjct: 464 MVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEML--NSGISPDSAVFDLLIRAYEKE 521

Query: 558 SNISHSIDLLNSMMDRG 574
            N++ + DLL  M  RG
Sbjct: 522 GNMAAASDLLLDMQRRG 538



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/474 (25%), Positives = 225/474 (47%), Gaps = 18/474 (3%)

Query: 65  FSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK---SF 121
           F+++I +S P+ G  +    ++ SLI  +  +GD +S  +VL  +R     + +    SF
Sbjct: 74  FAEDIVHSMPRFGC-EPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSF 132

Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
             +F  + K  +++E       M+    C   V ++++ ++   + G    AL+ ++ + 
Sbjct: 133 NSLFNGFSKMKMLDEVFVYMGVMLK--CCSPNVVTYSTWIDTFCKSGELQLALKSFHSM- 189

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
             K   + PN +TF  +I   C+ G ++ A+ L++EM       ++ TY  L+DG CK+ 
Sbjct: 190 --KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKG 247

Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            +  A  +   M  D   P  + +  +I+G  + G+   A K +  M  +G   +   Y 
Sbjct: 248 EMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYG 307

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            +I GLC  G L +A  +++ M  S  +P+ V + T++N   K GR      +   + ER
Sbjct: 308 VIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIER 367

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC--KPNTVVYSALIDGLCRVGKPD 419
            F  +    ST+I G+ K G+  +A+  +       C  K N V+Y+ LID LC+ G   
Sbjct: 368 GFEPDVVALSTMIDGIAKNGQLHEAIVYF-------CIEKANDVMYTVLIDALCKEGDFI 420

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           E E +  ++   G   + F Y+S + G  + G    A ++   M +   + + + Y+ LI
Sbjct: 421 EVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLI 480

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +GL   G + EAR V+ +ML+ G  PD   +  +I      G++  A  L  +M
Sbjct: 481 YGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDM 534



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 188/387 (48%), Gaps = 13/387 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ + I  +  SG+ +      + M+R+       +F  +   Y KA  +E A+ L+  M
Sbjct: 165 TYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEM 224

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    V ++ ++++   ++G   RA E Y+ +V  +   + PN+L +  +I    +
Sbjct: 225 -RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR---VEPNSLVYTTIIDGFFQ 280

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G  DNA++   +M  +    DI  Y  ++ GLC   +L EA  ++++M+     P  V 
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVI 340

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           F  ++N   K+G +  A  +   +  +G  P+ V  +T+I G+   G L +A+       
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF---- 396

Query: 325 ASKCM--PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
              C+   N+V Y  +I+ L K G  ++  R+   + E     ++++Y++ I+GL K+G 
Sbjct: 397 ---CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             DA KL  +M+++G   + + Y+ LI GL   G   EA ++  EM+N+G + ++  +  
Sbjct: 454 LVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDL 513

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCV 469
           L++ + + G    A ++  DM +   V
Sbjct: 514 LIRAYEKEGNMAAASDLLLDMQRRGLV 540



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 173/390 (44%), Gaps = 51/390 (13%)

Query: 245 EAVLLLDEMQVDGCFPTPVTFN----VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           EA+  L  ++     P P T N     LIN  C    L   A LV     +G  P+  ++
Sbjct: 4   EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVS----RGYTPHRSSF 59

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+++  +C  G +  A  ++  M    C P+ ++Y ++I+G  + G     + VL S+  
Sbjct: 60  NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119

Query: 361 RKFHV-------------------------------------NEYIYSTLISGLFKEGKA 383
               +                                     N   YST I    K G+ 
Sbjct: 120 SHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A+K +  M      PN V ++ LIDG C+ G  + A  +  EM     + N  TY++L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + GF + G+  +A E++  M ++    N + Y+ +I G  + G    A     +ML++G 
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ--PDVFTYNILLNALCKQSNIS 561
           + D+ AY  +I GLC  G ++EA ++  +M     KS   PD+  +  ++NA  K   + 
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDM----EKSDLVPDMVIFTTMMNAYFKSGRMK 355

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            ++++ + +++RG +PD+V  +  +  + +
Sbjct: 356 AAVNMYHKLIERGFEPDVVALSTMIDGIAK 385



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/392 (20%), Positives = 170/392 (43%), Gaps = 53/392 (13%)

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A+  L R+  S  +P+  T    I+ L+     +   + L  +  R +  +   +++++
Sbjct: 4   EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL--------- 425
           S + K G+ + A  +   M   GC+P+ + Y++LIDG CR G    A  +L         
Sbjct: 64  SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGF 123

Query: 426 --------FEMINNG--------------------CAANAFTYSSLMKGFFESGKGHKAV 457
                   F  + NG                    C+ N  TYS+ +  F +SG+   A+
Sbjct: 124 ICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLAL 183

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           + +  M ++    N V ++ LI G C+ G L  A  ++ +M       +VV Y+++I G 
Sbjct: 184 KSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C  G ++ A ++++ M  +E + +P+   Y  +++   ++ +  +++  L  M+++G   
Sbjct: 244 CKKGEMQRAEEMYSRM--VEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRL 301

Query: 578 DLVTCNIFLTA------LKEKLEAPQD--GTDFLNELAI------RLFKRQRTSGGFKIV 623
           D+    + ++       LKE  E  +D   +D + ++ I        FK  R      + 
Sbjct: 302 DITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMY 361

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
             ++++   P       ++  + +  ++  AI
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAI 393


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 145/516 (28%), Positives = 244/516 (47%), Gaps = 70/516 (13%)

Query: 192 TLTFNLVIKTVCRLGLVDNAIQL-FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
            +TF  ++K +C      +A+ +  R M   +C PD+++   L+ GLC ENR  EA L L
Sbjct: 122 AITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEA-LEL 180

Query: 251 DEMQVDG----CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             M  DG      P  V++  +ING  K G+ G+A      M  +   P+ VTY+++I  
Sbjct: 181 PHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAA 240

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR------------------- 347
           LC    +DKA+ +L  MV +  MPN  TY +I++G    G+                   
Sbjct: 241 LCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPD 300

Query: 348 ----------------AVDGARVLMS-----MEERKFHVNEYIYSTLISGLFKEGKAEDA 386
                           A  GA V M      M     H + Y+Y+ LI    K+GK ++A
Sbjct: 301 GLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEA 360

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           M ++ +M ++G  P+ V Y A+I  LC+ G+ ++A     +MI+ G +     Y+SL+ G
Sbjct: 361 MLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
                K  +A E+  +M       N + ++ +I   C++G++ E+  ++  M+  G KPD
Sbjct: 421 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 480

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           ++ YS++I G C AG ++EA+KL + M+ +  K  P+  TY  L+N  CK S +  ++ L
Sbjct: 481 IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLK--PNTVTYRTLINGYCKISRMGDALVL 538

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
              M   G  PD++T NI L  L                     F+ +RT+   ++   +
Sbjct: 539 FKEMESSGVSPDIITYNIILQGL---------------------FQTRRTAAAKELYVRI 577

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
            +     + ST+  ++  LC+ K    A+ + + NL
Sbjct: 578 TESGTQIELSTYNIILHGLCKNKLTDDAL-RMFQNL 612



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 232/480 (48%), Gaps = 8/480 (1%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + K         +A+ +    + E  C   V S   +L  +  E     ALE  + 
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHM 183

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           + + +     P+ +++  VI    + G    A   + EM  R   PD+ TY +++  LCK
Sbjct: 184 MADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV-----DNMFLKGCL 294
              +D+A+ +L  M  +G  P   T+  +++G C +G+   A   +     D +   G  
Sbjct: 244 GQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLE 303

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+  TY TL+ G   KG L    +LLD MV +   P+   Y  +I    K G+  +   V
Sbjct: 304 PDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLV 363

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M ++  + +   Y  +I  L K G+ EDAM  ++QM+++G  P  +VY++LI GLC 
Sbjct: 364 FSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCT 423

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
             K + AEE++ EM++ G   N   ++S++    + G+  ++ +++  M +     + + 
Sbjct: 424 CNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIIT 483

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           YS LI G C  GK+ EA  + + M+S G KP+ V Y ++I+G C    + +AL LF EM 
Sbjct: 484 YSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEM- 542

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KEKL 593
                  PD+ TYNI+L  L +    + + +L   + + G   +L T NI L  L K KL
Sbjct: 543 -ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKL 601



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 136/541 (25%), Positives = 256/541 (47%), Gaps = 52/541 (9%)

Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRT--VKSFN 158
           ++++VL RM     +    S   + K     +  +EA+ L H M D         V S+ 
Sbjct: 141 AMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYT 200

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           +V+N   +EG   +A   Y+ +++ +   I P+ +T++ +I  +C+   +D A+++   M
Sbjct: 201 TVINGFFKEGDSGKAYSTYHEMLDRR---ISPDVVTYSSIIAALCKGQAMDKAMEVLTSM 257

Query: 219 P----VRNC------------------------------------EPDIYTYCTLMDGLC 238
                + NC                                    EPDI TYCTL+ G  
Sbjct: 258 VKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYA 317

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
            +  L     LLD M  +G  P    +N+LI    K G++  A  +   M  +G  P+ V
Sbjct: 318 TKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAV 377

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY  +I  LC  G ++ A+   ++M+     P  + Y ++I+GL    +      +++ M
Sbjct: 378 TYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 437

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +R   +N   ++++I    KEG+  ++ KL+  M+  G KP+ + YS LIDG C  GK 
Sbjct: 438 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 497

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           DEA ++L  M++ G   N  TY +L+ G+ +  +   A+ ++K+M  +    + + Y+++
Sbjct: 498 DEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNII 557

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           + GL +  +   A+ ++ ++   G + ++  Y+ ++HGLC     ++AL++F  +  ++ 
Sbjct: 558 LQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDL 617

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD-----LVTCNIFLTALKEKL 593
           K +    T+NI+++AL K      + DL  +    G  P+     L+  NI    L E+L
Sbjct: 618 KLEAR--TFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEEL 675

Query: 594 E 594
           +
Sbjct: 676 D 676



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 200/440 (45%), Gaps = 32/440 (7%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P ++TY  L+   C+ +RLD     L  +   G     +TF  L+ GLC +     A  +
Sbjct: 85  PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 285 V-DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK---CMPNEVTYGTIIN 340
           V   M    C+P+  +   L+ GLC +    +A+ L   M   +     P+ V+Y T+IN
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G  K G +         M +R+   +   YS++I+ L K    + AM++   M++ G  P
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP 264

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF-----TYSSLMKGFFESGKGHK 455
           N   Y++++ G C  G+P EA   L ++ ++G   +       TY +L++G+   G    
Sbjct: 265 NCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVG 324

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
              +   M +N    +   Y++LI    + GK+ EA +V+++M  +G  PD V Y ++I 
Sbjct: 325 MHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            LC +G VE+A+  F +M  ++    P    YN L++ LC  +    + +L+  M+DRG 
Sbjct: 385 ILCKSGRVEDAMLYFEQM--IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG- 441

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
               +  N                T F N +     K  R     K+ ++M++  + P  
Sbjct: 442 ----ICLN----------------TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 481

Query: 636 STWERVVQELCRPKRIQAAI 655
            T+  ++   C   ++  A+
Sbjct: 482 ITYSTLIDGYCLAGKMDEAM 501



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/456 (23%), Positives = 218/456 (47%), Gaps = 21/456 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +E  I  + T++  +  K  +   +++L+++++ G++                   P+  
Sbjct: 302 LEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIH-------------------PDHY 342

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N++I    + G VD A+ +F +M  +   PD  TY  ++  LCK  R+++A+L  ++M
Sbjct: 343 VYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQM 402

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  + +N LI+GLC   +  RA +L+  M  +G   N + +N++I   C +G +
Sbjct: 403 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 462

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            ++  L D MV     P+ +TY T+I+G    G+  +  ++L  M       N   Y TL
Sbjct: 463 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTL 522

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G  K  +  DA+ L+K+M   G  P+ + Y+ ++ GL +  +   A+E+   +  +G 
Sbjct: 523 INGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 582

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                TY+ ++ G  ++     A+ +++++   +       ++++I  L + G+  EA+ 
Sbjct: 583 QIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKD 642

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++    S G  P+   Y  M   +   G +EE  +LF  M   +     D    N ++  
Sbjct: 643 LFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM--EDNGCTVDSGMLNFIVRE 700

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           L ++  I+ +   L+ + ++    +  T ++F+  L
Sbjct: 701 LLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLL 736



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 161/350 (46%), Gaps = 31/350 (8%)

Query: 316 AVSLLDRMV---ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           AVS  +RM    A K  P   TY  +I    +  R   G   L ++ ++ F V    ++ 
Sbjct: 68  AVSRYNRMARAGAGKVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTP 127

Query: 373 LISGLFKEGKAEDAMKL-WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           L+ GL  + +  DAM +  ++M E  C P+    + L+ GLC   +  EA E+   M + 
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADG 187

Query: 432 ---GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G A +  +Y++++ GFF+ G   KA   + +M       + V YS +I  LC+   +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKS-QPDVF 545
            +A  V T M+  G  P+   Y+S++HG C++G  +EA+    ++    +EP   +PD+ 
Sbjct: 248 DKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIA 307

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           TY  LL     +  +     LL+ M+  G  PD    NI + A  ++ +  +        
Sbjct: 308 TYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDE-------- 359

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            A+ +F + R  G            L+P   T+  V+  LC+  R++ A+
Sbjct: 360 -AMLVFSKMRQQG------------LNPDAVTYGAVIGILCKSGRVEDAM 396


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  215 bits (548), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 208/395 (52%), Gaps = 6/395 (1%)

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           A+  +      T+N  +  + + G    A ++F +M  + C P+IYTY  ++ GLC + +
Sbjct: 28  ARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAK 87

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            D A+ LL +M+     PT    N+L++ LCKNG++  A +L   +    C  + ++YN 
Sbjct: 88  TDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYNM 146

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           L +GLC    +D+A+++   M  +  +P+ +TY  ++ G  + GR      +L  M E K
Sbjct: 147 LTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGK 206

Query: 363 ----FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
                  + Y Y+T+ISG  K  +   A  + ++M++ GC PN V ++ L+DGLC  GK 
Sbjct: 207 KGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKL 266

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           DEA  +   M+   C   A TY+ L+ G   + +  KA + + DM +     N   Y+ L
Sbjct: 267 DEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTAL 326

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE-MLCLE 537
           I GLC+  K+ +A  +  +M S G +P+VV Y+ +I  LC  G +E A KLFN+ M    
Sbjct: 327 IGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRT 386

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
            K +PD + Y+ ++  LC+QS    + +    M++
Sbjct: 387 AKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVE 421



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 221/417 (52%), Gaps = 13/417 (3%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A R+F     +   + TV ++N+ LN +++ G   +A + ++ ++   +   LPN  T+ 
Sbjct: 20  ASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDML---YKECLPNIYTYG 76

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           +V++ +C     D A++L ++M  +   P  +    L+  LCK  ++D A  L   +  D
Sbjct: 77  IVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-D 135

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
            C    +++N+L  GLCK  ++ RA  +   M     +P+ +TYN L++G C  G +++A
Sbjct: 136 ECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQA 195

Query: 317 VSLLDRMV----ASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEERKFHVNEYIYS 371
           ++LL+ M+     S  +P+  +Y T+I+G  K  R +  AR VL  M +     N   ++
Sbjct: 196 MTLLEEMIEGKKGSDVVPDMYSYNTVISGFCK-ARQLPTARYVLRRMIKSGCSPNVVTFN 254

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           TL+ GL   GK ++A  +++ M+E+ C+P  V Y+ LI G  R  + D+A +   +M+  
Sbjct: 255 TLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRR 314

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N +TY++L+ G  ++ K   A+EI K M+      N V Y+ +I  LC+ G++  A
Sbjct: 315 GVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERA 374

Query: 492 RMVWTQML---SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
             ++   +   +  CKPD  AYS++I+ LC      EA + F  M+  +  ++P ++
Sbjct: 375 TKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIY 431



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 220/437 (50%), Gaps = 33/437 (7%)

Query: 122 IFIFKAYGKAHLVE-----EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
           +F + AY  A LV+     +A ++F  M+ +  C   + ++  VL  +  +     ALE 
Sbjct: 37  VFTYNAYLNA-LVKGGHGSKARKIFDDMLYK-ECLPNIYTYGIVLRGLCDDAKTDAALEL 94

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
              + + +   + P T   N+++  +C+ G VD A +L++ +    C  D  +Y  L  G
Sbjct: 95  ---LQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYNMLTYG 150

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF--LKG-- 292
           LCK +++D A+ +  EM+ +   P+ +T+N L+ G C+ G + +A  L++ M    KG  
Sbjct: 151 LCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSD 210

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            +P+  +YNT+I G C    L  A  +L RM+ S C PN VT+ T+++GL   G+  +  
Sbjct: 211 VVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEAN 270

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M ER        Y+ LI+G  +  + + A   +  M+ +G +PN   Y+ALI GL
Sbjct: 271 AMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGL 330

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN---NCV 469
           C   K ++A EIL  M + G   N  TY+ ++    + G+  +A +++ D   +    C 
Sbjct: 331 CDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCK 390

Query: 470 YNEVCYSVLIHGLCEDGKLREA-----RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
            +   YS +I+ LC   K  EA     RMV +++++   KP +  Y +M  GL     V+
Sbjct: 391 PDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVA---KPHI--YKAMADGL---ELVQ 442

Query: 525 EALKLFNEMLCLEPKSQ 541
           E  K+  E +CLE  + 
Sbjct: 443 ETEKV--ERVCLEASAH 457



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/333 (30%), Positives = 172/333 (51%), Gaps = 7/333 (2%)

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           T  T+N  +N L K G   +A K+ D+M  K CLPN  TY  ++ GLC     D A+ LL
Sbjct: 36  TVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELL 95

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             M +    P       +++ L K G+ VD A  L      +  ++   Y+ L  GL K 
Sbjct: 96  QDMESKMLTPTTFIVNMLVSCLCKNGK-VDAAYELYKRLSDECSLDRISYNMLTYGLCKA 154

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI----NNGCAAN 436
            + + A+ ++ +M E    P+ + Y+ L+ G CR G+ ++A  +L EMI     +    +
Sbjct: 155 DQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPD 214

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            ++Y++++ GF ++ +   A  + + M K+ C  N V ++ L+ GLC  GKL EA  ++ 
Sbjct: 215 MYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFE 274

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M+ R C+P  V Y+ +I G   A  +++A   F +M  L    +P+V+TY  L+  LC 
Sbjct: 275 YMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDM--LRRGVEPNVYTYTALIGGLCD 332

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            + +  ++++L  M   G +P++VT    + AL
Sbjct: 333 ANKVEDALEILKRMSSTGREPNVVTYTRVIGAL 365



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 153/311 (49%), Gaps = 7/311 (2%)

Query: 128 YG--KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           YG  KA  ++ A+ +F  M +E     ++ ++N +L    + G   +A+     ++  K 
Sbjct: 149 YGLCKADQIDRALAVFGEM-EENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKK 207

Query: 186 -MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
             +++P+  ++N VI   C+   +  A  + R M    C P++ T+ TL+DGLC   +LD
Sbjct: 208 GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLD 267

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           EA  + + M    C PT VT+ VLI G  +   + +A     +M  +G  PN  TY  LI
Sbjct: 268 EANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALI 327

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL---MSMEER 361
            GLC    ++ A+ +L RM ++   PN VTY  +I  L K G+     ++    M     
Sbjct: 328 GGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTA 387

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
           K   + Y YST+I  L ++ K  +A + + +M+E        +Y A+ DGL  V + ++ 
Sbjct: 388 KCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQETEKV 447

Query: 422 EEILFEMINNG 432
           E +  E   +G
Sbjct: 448 ERVCLEASAHG 458



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 162/340 (47%), Gaps = 23/340 (6%)

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY   +N LVK G      ++   M  ++   N Y Y  ++ GL  + K + A++L + M
Sbjct: 39  TYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM 98

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             K   P T + + L+  LC+ GK D A E L++ +++ C+ +  +Y+ L  G  ++ + 
Sbjct: 99  ESKMLTPTTFIVNMLVSCLCKNGKVDAAYE-LYKRLSDECSLDRISYNMLTYGLCKADQI 157

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS--RGCK--PDVVA 509
            +A+ ++ +M +N  V + + Y+ L++G C  G++ +A  +  +M+   +G    PD+ +
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYS 217

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+++I G C A  +  A  +   M+  +    P+V T+N LL+ LC    +  +  +   
Sbjct: 218 YNTVISGFCKARQLPTARYVLRRMI--KSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEY 275

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFKRQ 614
           M++R C+P  VT  + +T     L   +   D+  ++  R               L    
Sbjct: 276 MVERNCEPTAVTYTVLITGHARALRIDK-ANDYFVDMLRRGVEPNVYTYTALIGGLCDAN 334

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +     +I++ M      P   T+ RV+  LC+  +I+ A
Sbjct: 335 KVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERA 374



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 3/235 (1%)

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
           +  +  F    + Y+  ++ L K G    A K++  M+ K C PN   Y  ++ GLC   
Sbjct: 27  AARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDA 86

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K D A E+L +M +       F  + L+    ++GK   A E++K ++ + C  + + Y+
Sbjct: 87  KTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYN 145

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +L +GLC+  ++  A  V+ +M      P ++ Y+ +++G C AG +E+A+ L  EM+  
Sbjct: 146 MLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEG 205

Query: 537 EPKSQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +  S   PD+++YN +++  CK   +  +  +L  M+  GC P++VT N  L  L
Sbjct: 206 KKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGL 260


>gi|302795027|ref|XP_002979277.1| hypothetical protein SELMODRAFT_51561 [Selaginella moellendorffii]
 gi|300153045|gb|EFJ19685.1| hypothetical protein SELMODRAFT_51561 [Selaginella moellendorffii]
          Length = 570

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 248/529 (46%), Gaps = 57/529 (10%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           +V S+N ++    + G   +AL     +   K  ++ PN  T   ++K  C++G ++ A+
Sbjct: 1   SVASYNLLVRGYCETGEVCKALRLVKEM---KARDLAPNETTHGEILKGFCQIGRMEEAL 57

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD-GCFPTPVTFNVLING 271
           + FR + +     D   Y TL+DG CK  +L +A  L +EM VD G  P+ VT N L+ G
Sbjct: 58  EHFRSV-IDTSGVDPAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAG 116

Query: 272 LCKNGELGRAAKLVDNMFLK----GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LCK G   +A KL   M  +      +      N LI GLC  G +D+A+ L+      K
Sbjct: 117 LCKAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFEGCKDK 176

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSME-ERKFHVNEYIY---------------- 370
            M N VTYG +I GL K  R  DG R+L  M   R  + +   Y                
Sbjct: 177 AMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQA 236

Query: 371 --------------------STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
                                TL++GL K G++  A++L ++M   GC+P++ VY  +I+
Sbjct: 237 LELFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIE 296

Query: 411 GLCRVGKPDEAEEILFEMINNGCA-ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            LC  G+ D+A ++L E +  G A AN  TY+ ++ G +++ +  KA    K +  ++  
Sbjct: 297 ELCNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLS 356

Query: 470 YNEVCYS-VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
              V  S  +I GLC+ G+  EAR     M   G K +   Y+S++ GLC A  + EAL 
Sbjct: 357 APSVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALA 416

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            F+EM   + +  P V TYNILL+  CK   I  +  +  +M+D  C P  VT       
Sbjct: 417 FFHEM---QDEGLPSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEG 473

Query: 589 LKEKLEAPQD------GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
                +  +D         F   L I L + +    GF+++ +M+ K L
Sbjct: 474 FTRSGKMAEDYQFADQRDGFPKGLDIILSRLKNLEPGFQVIYMMVDKGL 522



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 186/380 (48%), Gaps = 21/380 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRM----RREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           T  +L+     +G F     +  RM    +R   +V   +   +     +A  V+EA+ L
Sbjct: 109 TCNTLVAGLCKAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALEL 168

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGL-----YHRALEFYNHIVNAKHMNILPNTLTF 195
                  F   +     N+V   I+ +GL         L     +  ++ +N  P+  T+
Sbjct: 169 V------FEGCKDKAMINAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLN--PDAATY 220

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           N ++   C L +V+ A++LF  +   N C PD     TL++GLCK  R  +A+ LL+EM 
Sbjct: 221 NSIVAGFCELDMVEQALELFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMD 280

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP-NEVTYNTLIHGLCLKGNL 313
             GC P+   + ++I  LC +GE  +A KL+     KG  P N  TY  ++ GL      
Sbjct: 281 RVGCQPSSQVYCLMIEELCNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRP 340

Query: 314 DKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +KA   L  +++S    P+ VT   II+GL K GR  +    L+SM +     N +IY++
Sbjct: 341 EKARRHLKGILSSSLSAPSVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNS 400

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ GL K  K  +A+  + +M ++G  P+ V Y+ L+DG C+V K +EA  +   M++  
Sbjct: 401 LLGGLCKAAKMGEALAFFHEMQDEGL-PSVVTYNILLDGFCKVVKIEEACAVFVAMVDAK 459

Query: 433 CAANAFTYSSLMKGFFESGK 452
           C   A TY +L +GF  SGK
Sbjct: 460 CLPTAVTYKTLTEGFTRSGK 479



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/352 (24%), Positives = 144/352 (40%), Gaps = 67/352 (19%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I   + +  +VE+A+ LF  +     C        +++N + + G   +ALE    +   
Sbjct: 223 IVAGFCELDMVEQALELFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEM--- 279

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN--------------------- 222
             +   P++  + L+I+ +C  G  D A +L  E   +                      
Sbjct: 280 DRVGCQPSSQVYCLMIEELCNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHR 339

Query: 223 ----------------CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
                             P + T C ++DGLCK  R  EA   L  M   G       +N
Sbjct: 340 PEKARRHLKGILSSSLSAPSVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYN 399

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
            L+ GLCK  ++G A      M  +G LP+ VTYN L+ G C    +++A ++   MV +
Sbjct: 400 SLLGGLCKAAKMGEALAFFHEMQDEG-LPSVVTYNILLDGFCKVVKIEEACAVFVAMVDA 458

Query: 327 KCMPNEVTYGTIINGLVKLGRAVD-------------GARVLMS-------------MEE 360
           KC+P  VTY T+  G  + G+  +             G  +++S             M  
Sbjct: 459 KCLPTAVTYKTLTEGFTRSGKMAEDYQFADQRDGFPKGLDIILSRLKNLEPGFQVIYMMV 518

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            K  +     +++I  L+K G  + A KL + +++KG  P  V+ +A+ DGL
Sbjct: 519 DKGLIKLMTVNSIIRRLWKAGMGDQADKLAQTLVKKGGIPPAVMRAAVTDGL 570


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 223/457 (48%), Gaps = 11/457 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH--RALEFYNHIVNAKHMNILPN 191
           V EA  L   + D     R   S+N+VL  + + G  H  +A      +    H    PN
Sbjct: 67  VTEACSLLSALPD----VRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPN 122

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +++  V++ +C       A+ L R M       D+ TY TL+ GLC  + LD A+ LLD
Sbjct: 123 AVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLD 182

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           EM   G  P  V ++ L+ G C++G      K+ ++M  +G  P+ + +  LI  LC +G
Sbjct: 183 EMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEG 242

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
              KA  + D MV     PN VTY  +IN L K G   +   +   M+++    +   Y+
Sbjct: 243 KTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYN 302

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKG--CKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           TLI+GL    + ++AM   ++M++     +P+ V ++++I GLC++G+  +A ++   M 
Sbjct: 303 TLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMA 362

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             GC  N  TY+ L+ GF    K   A+ +  ++A +    +   YS+LI+G  +  ++ 
Sbjct: 363 ERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVD 422

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A      M  RG K ++  Y  ++  +C  G +E A+ LFNEM   +     D   Y+ 
Sbjct: 423 RAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM---DKNCGLDAIAYST 479

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           +++  CK  ++     L+  M+D G  PD VT ++ +
Sbjct: 480 MIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLI 516



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 134/469 (28%), Positives = 218/469 (46%), Gaps = 42/469 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  + +    +    EA+ L  +M      +  V ++ +++  +        ALE  + 
Sbjct: 125 SYTTVMRGLCASRRTGEAVALLRSM-QASGVRADVVTYGTLIRGLCDASELDAALELLDE 183

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  +    + PN + ++ +++  CR G   +  ++F +M  R  +PD+  +  L+D LCK
Sbjct: 184 MCGS---GVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK 240

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           E +  +A  + D M   G  P  VT+NVLIN LCK G +  A  L   M  KG  P+ VT
Sbjct: 241 EGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCM--PNEVTYGTIINGLVKLGRAVDGARVLMS 357
           YNTLI GL     +D+A+S L+ M+    +  P+ VT+ ++I+GL K+GR     +V   
Sbjct: 301 YNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREM 360

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M ER    N   Y+ LI G  +  K + AM L  ++   G +P++  YS LI+G  ++ +
Sbjct: 361 MAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWE 420

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            D AE+ L  M   G  A  F Y  L+    + G   +A+ ++ +M KN C  + + YS 
Sbjct: 421 VDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKN-CGLDAIAYST 479

Query: 478 LIHGLCEDGKLR-----------------------------------EARMVWTQMLSRG 502
           +IHG C+ G ++                                   EA  V  QM + G
Sbjct: 480 MIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASG 539

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             PDV  + S+I G    G  ++ LKL +EM        P + +  I L
Sbjct: 540 FVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIRL 588



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 175/337 (51%), Gaps = 9/337 (2%)

Query: 280 RAAKLVDNMFLKGCLPN---EVTYNTLIHGLCLKG--NLDKAVSLL---DRMVASKCMPN 331
           R A + +   L   LP+    V+YNT++  LC +G  +L +A SLL    R       PN
Sbjct: 63  RGAPVTEACSLLSALPDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPN 122

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            V+Y T++ GL    R  +   +L SM+      +   Y TLI GL    + + A++L  
Sbjct: 123 AVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLD 182

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M   G +PN VVYS L+ G CR G+  +  ++  +M   G   +   ++ L+    + G
Sbjct: 183 EMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEG 242

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           K  KA ++   M +     N V Y+VLI+ LC++G +REA  +  +M  +G  PDVV Y+
Sbjct: 243 KTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYN 302

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           ++I GL     ++EA+    EM+  +   +PDV T+N +++ LCK   ++ ++ +   M 
Sbjct: 303 TLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMA 362

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           +RGC  +LVT N  +     ++   +   + ++ELAI
Sbjct: 363 ERGCMCNLVTYNYLIGGFL-RVHKVKMAMNLMDELAI 398



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 101/226 (44%), Gaps = 28/226 (12%)

Query: 436 NAFTYSSLMKGFFESGKGH--KAVEIWKDMAKNN---CVYNEVCYSVLIHGLCEDGKLRE 490
           +A +Y++++      G  H  +A  +  DM++        N V Y+ ++ GLC   +  E
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +   M + G + DVV Y ++I GLC+A  ++ AL+L +EM       QP+V  Y+ L
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMC--GSGVQPNVVVYSCL 199

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
           L   C+         +   M  RG  PD+    I  T L + L                 
Sbjct: 200 LRGYCRSGRWQDVGKVFEDMSRRGIKPDV----IMFTGLIDDL----------------- 238

Query: 611 FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            K  +T    K+ ++M+Q+ L P   T+  ++  LC+   ++ A+ 
Sbjct: 239 CKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALT 284


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/395 (33%), Positives = 207/395 (52%), Gaps = 11/395 (2%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDGLCKENRLDE 245
            I P+ +TF  +I+  C+  +V+ A ++F+EM   N C+PD + Y  L+DG CKE R+D 
Sbjct: 41  GIHPDVVTFTALIRGFCKNRMVERAWEIFQEMIKSNRCQPDCFLYGVLIDGYCKELRMDR 100

Query: 246 AVLLLDEMQVDGCF-PTPVTFNVLINGLCKNGELGRAAKLVD-NMFLKGCLPNEVTYNTL 303
           A+ LL EM+V+    P  V +N +++GLC++     A K +D  M  +GC P  VTY +L
Sbjct: 101 ALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSL 160

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C    +  A+++ + M+  K  P  V+Y  II+GL K GR  D  RV+  ME    
Sbjct: 161 IRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREMETLGC 220

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            +N  IY+TLI GL K G  +DA  L++ M   G  PN   Y+ LID  CR  + + A  
Sbjct: 221 ELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALG 280

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
            LF+ I + C  +   Y++++ G     +   A  ++++M       +   Y+VL+HG  
Sbjct: 281 -LFDHIRDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAF 339

Query: 484 EDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
             G+  EA  +  ++    GC  +++ Y+++I G C    +E  + LF EM   +    P
Sbjct: 340 RSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEM--RQRGIAP 393

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           D  TY+ L++ L     I  + DL   M+  G  P
Sbjct: 394 DFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSP 428



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 217/464 (46%), Gaps = 30/464 (6%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN   F  +I  + +   + +A +    M      PD+ T+  L+ G CK   ++ A  +
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 250 LDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGL 307
             EM + + C P    + VLI+G CK   + RA +L+  M ++  + P+ V YN+++ GL
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 308 CLKGNLDKAVSLLDR-MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           C      +A   LD  MV   C P  VTY ++I G  K  +      +  +M ERK    
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              YS +I GL K G+  DA ++ ++M   GC+ N V+Y+ LIDGLC+ G  D+A  +  
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYR 248

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            M  +G   N  TY++L+  F  + +   A+ ++ D  ++ C  +   Y+ ++ GLC + 
Sbjct: 249 IMKRSGAFPNQRTYATLIDTFCRNDRTETALGLF-DHIRDYCPLDVAMYTAVVSGLCRER 307

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           +L +AR ++ +M   G   D  AY+ ++HG   +G  EEA ++  E L  +P    ++ T
Sbjct: 308 RLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEE-LGDDPGCVANLLT 366

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN ++   C +S +     L   M  RG  PD  T +  +                    
Sbjct: 367 YNTVIAGCCLESGMV----LFYEMRQRGIAPDFATYSALID------------------- 403

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
             RL         F + E ML   LSP +    RVV  LC  +R
Sbjct: 404 --RLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRR 445



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 181/445 (40%), Gaps = 106/445 (23%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
           + +F  +  A  K++ + +A R    M D       V +F +++    +  +  RA E +
Sbjct: 11  QHAFASLIDALSKSNRLGDAARALELMCDA-GIHPDVVTFTALIRGFCKNRMVERAWEIF 69

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV-RNCEPDIYTYCTLMDG 236
             ++ +      P+   + ++I   C+   +D A++L REM V R  +PD+  Y +++DG
Sbjct: 70  QEMIKSNRCQ--PDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDG 127

Query: 237 LCKENRLDEAVLLLDEMQV-DGCFPTPVTF------------------------------ 265
           LC+ NR  EA   LDE  V  GC PT VT+                              
Sbjct: 128 LCRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQP 187

Query: 266 -----NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
                +V+I+GL K G +  A ++V  M   GC  N V Y TLI GLC  G LD A +L 
Sbjct: 188 TIVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALY 247

Query: 321 DRMVASKCMPNEVTYGTIINGLVK-------LG--------------------------R 347
             M  S   PN+ TY T+I+   +       LG                          R
Sbjct: 248 RIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHIRDYCPLDVAMYTAVVSGLCRER 307

Query: 348 AVDGARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDA-------------------- 386
            +D AR L   M       + + Y+ L+ G F+ G++E+A                    
Sbjct: 308 RLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTY 367

Query: 387 ------------MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
                       M L+ +M ++G  P+   YSALID L   G+   A ++  EM+ +G +
Sbjct: 368 NTVIAGCCLESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLS 427

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEI 459
             +     ++     S +G  A ++
Sbjct: 428 PPSGVLGRVVARLCWSRRGDLAAKL 452



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 144/307 (46%), Gaps = 10/307 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + +   KA  ++ A+ +++ M+ E   + T+ S++ +++ + + G   R  + Y  
Sbjct: 156 TYTSLIRGACKAKKMKLAMTIWNAML-ERKIQPTIVSYSVIIDGLSKAG---RVYDAYRV 211

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   + +    N + +  +I  +C+ G +D+A  L+R M      P+  TY TL+D  C+
Sbjct: 212 VREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCR 271

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            +R + A+ L D ++ D C      +  +++GLC+   L  A  L   M L G   +   
Sbjct: 272 NDRTETALGLFDHIR-DYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHA 330

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           YN L+HG    G  ++A  +L+ +     C+ N +TY T+I G         G  +   M
Sbjct: 331 YNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEM 386

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +R    +   YS LI  L   G+   A  L ++M+  G  P + V   ++  LC   + 
Sbjct: 387 RQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRG 446

Query: 419 DEAEEIL 425
           D A +++
Sbjct: 447 DLAAKLI 453



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 107/242 (44%), Gaps = 12/242 (4%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYR-MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           + +LI     SG F      LYR M+R      ++++  +   + +    E A+ LF  +
Sbjct: 227 YTTLIDGLCKSG-FLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI 285

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D  +C   V  + +V++ + +E     A   +  +   +   +  +T  +N+++    R
Sbjct: 286 RD--YCPLDVAMYTAVVSGLCRERRLDDARALFREM---RLAGVSADTHAYNVLLHGAFR 340

Query: 205 LGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
            G  + A ++  E+     C  ++ TY T++ G C    L+  ++L  EM+  G  P   
Sbjct: 341 SGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFA 396

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T++ LI+ L  +GE+ RA  L + M   G  P       ++  LC     D A  L++  
Sbjct: 397 TYSALIDRLLGSGEIRRAFDLCEEMLASGLSPPSGVLGRVVARLCWSRRGDLAAKLIEMA 456

Query: 324 VA 325
           +A
Sbjct: 457 MA 458


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 141/477 (29%), Positives = 227/477 (47%), Gaps = 17/477 (3%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K   +E+A  LF  M+  F      +++ S++    +E    +    Y  +V  K  NI+
Sbjct: 362 KEGAMEKAKALFDGMI-TFGVTPGARAYASLIEGFFREKNVRKG---YELLVEIKKRNIV 417

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            +  T+   +K +C  G +D A  + +EM    C P++  Y TL+    +++R  +AV +
Sbjct: 418 ISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRV 477

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L EM+  G  P    +N LI GL K  ++  A   +  M   G  P+  TY   I G   
Sbjct: 478 LKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIE 537

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G    A   +  M+    +PN+V    +IN   K G+ ++      SM E+    +   
Sbjct: 538 AGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKT 597

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ L++GL K GK  DA +++ +M  KG  P+   Y  LIDG  ++G   +A  I  EM+
Sbjct: 598 YTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMV 657

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G  +N   Y+ L+ GF  SG+  KA E+  +M+      N V Y  +I G C+ G L 
Sbjct: 658 QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLA 717

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF--NEMLCLEPKSQPDVFTY 547
           EA  ++ +M  +G  PD   Y++++ G C    VE A+ +F  NE  C    S P    +
Sbjct: 718 EAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGC-ASSSAP----F 772

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCD----PDLVTCNIFLTAL--KEKLEAPQD 598
           N L+N + K      + D++N +MD   D    P+ VT NI +  L  +  LEA ++
Sbjct: 773 NALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKE 829



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 244/529 (46%), Gaps = 36/529 (6%)

Query: 127 AYGKAH-LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           A G  H +V     +   M D F C            V+ +EG   +A   ++ ++    
Sbjct: 334 ANGLVHEMVSHGFSIDPMMYDYFIC------------VMSKEGAMEKAKALFDGMIT--- 378

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
             + P    +  +I+   R   V    +L  E+  RN     YTY T + G+C    LD 
Sbjct: 379 FGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDG 438

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A  ++ EM   GC P  V +  LI    +    G A +++  M  +G  P+   YN+LI 
Sbjct: 439 AYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLII 498

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           GL     +D+A S L  MV +   P+  TYG  I+G ++ G      + +  M E     
Sbjct: 499 GLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIP 558

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N+ + + LI+   K+GK  +A   ++ M+E+G   +   Y+ L++GL + GK ++AEEI 
Sbjct: 559 NKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIF 618

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM   G A + F+Y +L+ GF + G   KA  I+ +M +     N + Y++L+ G C  
Sbjct: 619 HEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRS 678

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G++ +A+ +  +M  +G  P+ V Y ++I G C +G + EA +LF+EM        PD F
Sbjct: 679 GEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKL--KGLVPDSF 736

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
            Y  L++  C+ +++  +I +  +  ++GC       N  +  +  K    +  TD +N 
Sbjct: 737 VYTTLVDGCCRLNDVERAITIFETN-EKGCASSSAPFNALINWVF-KFGKTELTTDMINR 794

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           L           G F        KF  P   T+  ++  LC+   ++AA
Sbjct: 795 L---------MDGSF-------DKFGKPNDVTYNIMIDYLCKEGNLEAA 827



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 159/628 (25%), Positives = 280/628 (44%), Gaps = 83/628 (13%)

Query: 110 RREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVD-EFHCKRTVKSFNSVLNVIIQEG 168
           + + RV+L   F  +   Y +   ++EA+ +F +  D +     ++   N +L+ +++  
Sbjct: 147 KSDDRVLL---FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRN 203

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV-------------------- 208
                 + Y  +V     N++ +  ++ ++I   CR G V                    
Sbjct: 204 RLDLFWDVYKGMV---ERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLN 260

Query: 209 -DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
            D A++L + M  +   P   +Y  L+DGLCK+ RL++A  LL EM   G F   V +++
Sbjct: 261 VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSI 320

Query: 268 LINGL-----------------------------------CKNGELGRAAKLVDNMFLKG 292
           LI+GL                                    K G + +A  L D M   G
Sbjct: 321 LIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG 380

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P    Y +LI G   + N+ K   LL  +     + +  TYGT + G+   G  +DGA
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGD-LDGA 439

Query: 353 -RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             ++  M       N  IY+TLI    ++ +  DA+++ K+M E+G  P+T  Y++LI G
Sbjct: 440 YNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIG 499

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L +  K DEA   L EM+ NG   +AFTY + + G+ E+G+   A +  K+M +   + N
Sbjct: 500 LSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPN 559

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
           +V  + LI+  C+ GK+ EA   +  M+ +G   D   Y+ +++GL   G V +A ++F+
Sbjct: 560 KVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFH 619

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           EM        PDVF+Y  L++   K  N+  +  + + M+  G   +++  N+ L     
Sbjct: 620 EM--RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCR 677

Query: 592 KLEAPQDGTDFLNELAIRLF---------------KRQRTSGGFKIVEVMLQKFLSPQTS 636
             E  +   + L+E++ + F               K    +  F++ + M  K L P + 
Sbjct: 678 SGEI-EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSF 736

Query: 637 TWERVVQELCRPKRIQAAINKCWSNLYG 664
            +  +V   CR   ++ AI    +N  G
Sbjct: 737 VYTTLVDGCCRLNDVERAITIFETNEKG 764



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 150/578 (25%), Positives = 256/578 (44%), Gaps = 68/578 (11%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVL------NVIIQEGLYHRALE----------FY 177
           V    R + ++++ F  ++ V+    +L      N++I    Y  A++           Y
Sbjct: 381 VTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAY 440

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           N +         PN + +  +IKT  +     +A+++ +EM  +   PD + Y +L+ GL
Sbjct: 441 NIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGL 500

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
            K  ++DEA   L EM  +G  P   T+   I+G  + GE   A K V  M   G +PN+
Sbjct: 501 SKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNK 560

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           V    LI+  C KG + +A S    MV    + +  TY  ++NGLVK G+  D   +   
Sbjct: 561 VLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHE 620

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M  +    + + Y TLI G  K G  + A  ++ +M++ G   N ++Y+ L+ G CR G+
Sbjct: 621 MRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGE 680

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            ++A+E+L EM   G   NA TY +++ G+ +SG   +A +++ +M     V +   Y+ 
Sbjct: 681 IEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTT 740

Query: 478 LIHGLCEDGKLREARMVW------------------------------TQMLSR------ 501
           L+ G C    +  A  ++                              T M++R      
Sbjct: 741 LVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSF 800

Query: 502 --GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
               KP+ V Y+ MI  LC  G++E A +LF+ M   +    P V TY  LLN   K   
Sbjct: 801 DKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQ--KANLMPTVITYTSLLNGYDKMGR 858

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTA-LKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            S    + + ++  G +PD +  ++ + A LKE +      T     L  ++F +     
Sbjct: 859 RSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGM------TTKALVLLDQMFAKNAVDD 912

Query: 619 GFKIVEVMLQKFLS-----PQTSTWERVVQELCRPKRI 651
           G K+     +  LS      +    E+VV+ + R K I
Sbjct: 913 GCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYI 950



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 199/387 (51%), Gaps = 12/387 (3%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           IL +  T+ +++  + + G V++A ++F EM  +   PD+++Y TL+DG  K   + +A 
Sbjct: 591 ILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKAS 650

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            + DEM   G     + +N+L+ G C++GE+ +A +L+D M  KG  PN VTY T+I G 
Sbjct: 651 SIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGY 710

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G+L +A  L D M     +P+   Y T+++G  +L   V+ A  +    E+    + 
Sbjct: 711 CKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND-VERAITIFETNEKGCASSS 769

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMME----KGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             ++ LI+ +FK GK E    +  ++M+    K  KPN V Y+ +ID LC+ G  + A+E
Sbjct: 770 APFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKE 829

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +   M          TY+SL+ G+ + G+  +   ++ ++       + + YSV+I+   
Sbjct: 830 LFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFL 889

Query: 484 EDGKLREARMVWTQMLSR-----GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           ++G   +A ++  QM ++     GCK  +    +++ G    G +E A K+   M+ L  
Sbjct: 890 KEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRL-- 947

Query: 539 KSQPDVFTYNILLNALCKQSNISHSID 565
           K  PD  T   L+N  C  SN   + D
Sbjct: 948 KYIPDSSTVIELINESCISSNQRMAAD 974



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 170/359 (47%), Gaps = 15/359 (4%)

Query: 81  LGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           LGD+  Y+ L+     +G     E + + MR +       S+  +   + K   +++A  
Sbjct: 592 LGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASS 651

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           +F  MV +      V  +N +L    + G   +A E  + +         PN +T+  +I
Sbjct: 652 IFDEMV-QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGK---GFPPNAVTYCTII 707

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
              C+ G +  A QLF EM ++   PD + Y TL+DG C+ N ++ A+ +  E    GC 
Sbjct: 708 DGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCA 766

Query: 260 PTPVTFNVLINGLCKNGELGRAA----KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
            +   FN LIN + K G+         +L+D  F K   PN+VTYN +I  LC +GNL+ 
Sbjct: 767 SSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEA 826

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  L   M  +  MP  +TY +++NG  K+GR  +   V   +       +  +YS +I+
Sbjct: 827 AKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIIN 886

Query: 376 GLFKEGKAEDAMKLWKQMMEK-----GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
              KEG    A+ L  QM  K     GCK +     AL+ G  +VG+ + AE+++  M+
Sbjct: 887 AFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMV 945



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 194/425 (45%), Gaps = 49/425 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF-IFIFKAYGKAHLVEEAIRLFHT 143
           T+ + I  Y  +G+F S +  +  M  E  V+  K     +   Y K   V EA   F +
Sbjct: 527 TYGAFISGYIEAGEFASADKYVKEML-ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRS 585

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           MV++       K++  ++N +++ G  + A E ++ +   +   I P+  ++  +I    
Sbjct: 586 MVEQ-GILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM---RGKGIAPDVFSYGTLIDGFS 641

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           +LG +  A  +F EM       ++  Y  L+ G C+   +++A  LLDEM   G  P  V
Sbjct: 642 KLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAV 701

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS----- 318
           T+  +I+G CK+G+L  A +L D M LKG +P+   Y TL+ G C   ++++A++     
Sbjct: 702 TYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETN 761

Query: 319 ---------------------------------LLDRMVASKCMPNEVTYGTIINGLVKL 345
                                            L+D        PN+VTY  +I+ L K 
Sbjct: 762 EKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKE 821

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           G       +   M++         Y++L++G  K G+  +   ++ +++  G +P+ ++Y
Sbjct: 822 GNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMY 881

Query: 406 SALIDGLCRVGKPDEAEEILFEM-----INNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           S +I+   + G   +A  +L +M     +++GC  +  T  +L+ GF + G+   A ++ 
Sbjct: 882 SVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVV 941

Query: 461 KDMAK 465
           ++M +
Sbjct: 942 ENMVR 946



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 85/434 (19%), Positives = 164/434 (37%), Gaps = 101/434 (23%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV--------------------TYGTI 338
           +++ L   LC  G+++KA S++ RM+  K    EV                     +G +
Sbjct: 99  SFSFLALDLCNFGSIEKAHSVVIRMIERKWPVAEVWSSIVRCLREFVGKSDDRVLLFGIL 158

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIY--STLISGLFKEGKAEDAMKLWKQMMEK 396
           I+G ++ G   +   V  S ++    +   +   + L+  L K  + +    ++K M+E+
Sbjct: 159 IDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVER 218

Query: 397 GCKPNTVVYSALIDGLCRVG---------------------KPDEAEEILFEMINNGCAA 435
               +   Y  LI   CR G                       DEA E+   M   G   
Sbjct: 219 NVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVP 278

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL------------- 482
           +  +Y+ L+ G  +  +   A  +  +M       + V YS+LI GL             
Sbjct: 279 SRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLV 338

Query: 483 ----------------------CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
                                  ++G + +A+ ++  M++ G  P   AY+S+I G    
Sbjct: 339 HEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFRE 398

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            +V +  +L  E+        P  +TY   +  +C   ++  + +++  M   GC P++V
Sbjct: 399 KNVRKGYELLVEIKKRNIVISP--YTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVV 456

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
              I+ T +K  L+  + G       A+R+ K  R  G            ++P T  +  
Sbjct: 457 ---IYTTLIKTFLQKSRFGD------AVRVLKEMREQG------------IAPDTFCYNS 495

Query: 641 VVQELCRPKRIQAA 654
           ++  L + K++  A
Sbjct: 496 LIIGLSKAKKMDEA 509


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 159/529 (30%), Positives = 262/529 (49%), Gaps = 14/529 (2%)

Query: 82  GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS---FIFIFKAYGKAHLVEEAI 138
           G   F +L   +   G  +       RM R +     +S   F++     GK  L     
Sbjct: 181 GFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSN--- 237

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           + F  MV      ++V ++N ++  + +EG    A   ++ +   K M + P+ +T+N +
Sbjct: 238 KFFRDMVGA-GIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQM---KQMGLTPDIVTYNSL 293

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           I    +LGL+D +  LF EM    CEPD+ TY  L++  CK  ++ +A   L EM+  G 
Sbjct: 294 IDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGL 353

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  VT++ LI+ LCK   L +A K + +M   G  PNE TY +LI   C  G L  A+ 
Sbjct: 354 KPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALK 413

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           L D M+  +   N VTY T+++GL K GR ++   +  +M +     N   Y+ L+ G  
Sbjct: 414 LADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHI 473

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K  + E+A++L K++ EK  KP+ ++Y  +I GLC   K +E E ++ EM   G  AN+ 
Sbjct: 474 KNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSV 533

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            Y+  M  +F++GK  +A+ + ++M         V + VLI GLC+ G + EA   + +M
Sbjct: 534 IYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARM 593

Query: 499 LSRGCKPDVVAY-SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
                +P+ VA  +++I GLC    +E A KLF+EM   +    PD   Y  L++   K 
Sbjct: 594 ADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEM--QDKNMVPDKIAYTALIDGNLKH 651

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            +   ++++ + M + G + DL      +  L +     Q    FLNE+
Sbjct: 652 KDFQEALNIRSRMSELGMELDLHAYTSLVWGLSQG-NLVQQARMFLNEM 699



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 228/487 (46%), Gaps = 42/487 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I +    GD  + + + ++M++        ++  +   YGK  L++E+  LF  M
Sbjct: 254 TYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEM 313

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   C+  V ++N+++N   +     +A  F + + N+    + PN +T++ +I  +C+
Sbjct: 314 KD-VGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNS---GLKPNVVTYSTLIDALCK 369

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPV 263
             ++  AI+   +M      P+ +TY +L+D  CK   L +A+ L DEM QV   F   V
Sbjct: 370 EHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNV-V 428

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG----------------- 306
           T+  L++GLCK G +  A  L   M   G  PN  TY  L+HG                 
Sbjct: 429 TYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEI 488

Query: 307 ------------------LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
                             LC +  L++   ++  M A     N V Y   ++   K G+ 
Sbjct: 489 KEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKT 548

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV-VYSA 407
           V+   +L  M +    V    +  LI GL K+G  E+A+  + +M +   +PN V V +A
Sbjct: 549 VEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTA 608

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LIDGLC+    + A+++  EM +     +   Y++L+ G  +     +A+ I   M++  
Sbjct: 609 LIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELG 668

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              +   Y+ L+ GL +   +++ARM   +M+ +G  PD +    ++      GS++EA+
Sbjct: 669 MELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAI 728

Query: 528 KLFNEML 534
           +L +E+L
Sbjct: 729 ELHDELL 735



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 223/488 (45%), Gaps = 22/488 (4%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A++ F     +F    T +S+  +++++    +Y  A  F   +++++   ILP    F 
Sbjct: 112 ALKFFRWAKTKFGFCLTTESYCLLVHILFYARMYFDANFFLKELISSRR--ILPGFDVFE 169

Query: 197 LVIKT--VC---------------RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++  T  VC                LG+++ A Q F  M      P   +    +  L K
Sbjct: 170 VLWSTRNVCVPGFGVFDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSCNAFLYRLAK 229

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             + D +     +M   G   +  T+N++I  +CK G++  A  L   M   G  P+ VT
Sbjct: 230 TGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVT 289

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YN+LI G    G LD++  L + M    C P+ +TY  +IN   K  +       L  M+
Sbjct: 290 YNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMK 349

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 N   YSTLI  L KE   + A+K    M   G  PN   Y++LID  C+ G   
Sbjct: 350 NSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLS 409

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A ++  EM+      N  TY++L+ G  + G+  +A ++++ M K     N   Y+ L+
Sbjct: 410 DALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALV 469

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           HG  ++ ++  A  +  ++  +  KPD++ Y ++I GLC+   +EE   + +EM     +
Sbjct: 470 HGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIR 529

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
           +   ++T  I ++A  K      +++LL  M D G +  +VT  + +  L +K    ++ 
Sbjct: 530 ANSVIYT--IRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKK-GLVEEA 586

Query: 600 TDFLNELA 607
            D+   +A
Sbjct: 587 IDYFARMA 594


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 145/508 (28%), Positives = 248/508 (48%), Gaps = 34/508 (6%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V++A+  FH M+   H    ++ FN +L+   +   Y   +     +   +   I P+  
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQ-FNKILDSFAKMKHYPTVVSLSRRL---ELKAIQPDFF 99

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N++I   C LG ++ A  +  ++     +PD  T  TL+ GLC + ++ +A+   D++
Sbjct: 100 TLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKL 159

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G     V++  LING+CK GE   A +L+  +  +   PN V YNT+I  LC +  +
Sbjct: 160 LAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLV 219

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +L   M       N VTY  II+G   +G+  +    L  M  +  + + YIY+TL
Sbjct: 220 SEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTL 279

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG---------------------- 411
           +  L KEGK ++A  +   +++   KPN + Y+ LIDG                      
Sbjct: 280 VDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYN 339

Query: 412 -----LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
                LC++ + +EA  +  EM       N  TY+SL+ G  +SG+   A ++  +M   
Sbjct: 340 IMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDR 399

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL-CNAGSVEE 525
               N + Y+ LI+GLC++G+L +A  +  +M  +G +PD+   + ++HGL C    ++ 
Sbjct: 400 GHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKN 459

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A  LF ++L  +    P+V+TYNI++   CK+  +  +  L + M D GC P+ +T  I 
Sbjct: 460 AQGLFQDLL--DKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKII 517

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKR 613
           + AL EK E  +        +A  L KR
Sbjct: 518 ICALLEKGETDKAEKLLCEMIARGLLKR 545



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 164/349 (46%), Gaps = 8/349 (2%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           N+D A+    RM+  +  P  + +  I++   K+        +   +E +    + +  +
Sbjct: 43  NVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLN 102

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+     G+   A  +  ++++ G +P+TV  + LI GLC  G+  +A     +++  
Sbjct: 103 ILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQ 162

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +  +Y +L+ G  + G+   A+++ + +       N V Y+ +I  LC+   + EA
Sbjct: 163 GFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEA 222

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++++M  +G   +VV YS++IHG C  G + EAL   NEM+       PDV+ YN L+
Sbjct: 223 CNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVL--KAINPDVYIYNTLV 280

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK------LEAPQDGTDFLNE 605
           +AL K+  +  + ++L  ++     P+++T N  +    +       L          N 
Sbjct: 281 DALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNI 340

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  RL K +R      + + M QK + P T T+  ++  LC+  RI  A
Sbjct: 341 MINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYA 389


>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 544

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 227/430 (52%), Gaps = 8/430 (1%)

Query: 77  GSYQLGDS----TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAH 132
           G YQ   S    T+ S+I   + +  F  +E++L  + + +    E  FI + + YG A 
Sbjct: 85  GKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLHKSQIKCGENIFINVIRNYGLAG 144

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
             + A+R F   + +F+ +R+V+S N++LN  +Q   Y      + +   +K+  +LPN 
Sbjct: 145 KPDFALRTF-IRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKN-CRSKY-GVLPNV 201

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
            T N++IK +C+   V++A+++  EMP     P++ TY T++ G      +  A  +  E
Sbjct: 202 FTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGE 261

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +   G  P   T+ +L+NG C+ G L  A KL+D+M   G  PNEVTY  ++   C +  
Sbjct: 262 LFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKK 321

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
             +A +LLD M+  + +P+      +I+ L + G+  +   +   M ++    +  I ST
Sbjct: 322 AGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPDNAIMST 381

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI  L KEGK  +A KL+ +  E+G  P+ + Y+ LI G+C  G+  EA ++  +M+  G
Sbjct: 382 LIHWLCKEGKVWEARKLFGEF-ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKG 440

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              NAFTY+ L+KGF + G   + + I ++M  N C+ N+  Y++LI  LC+ G   E  
Sbjct: 441 YKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVD 500

Query: 493 MVWTQMLSRG 502
            V +  ++ G
Sbjct: 501 KVVSMAMASG 510



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 174/385 (45%), Gaps = 60/385 (15%)

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           + N L+N   +N        +  N   K G LPN  T N LI  LC K +++ AV +LD 
Sbjct: 167 SLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDE 226

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M A   +PN VTY                                   +T++ G    G 
Sbjct: 227 MPAMGMIPNVVTY-----------------------------------TTILGGYSSRGD 251

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             +A K++ ++ ++G  P+   Y+ L++G C  G+  +A +++ +M  NG   N  TY  
Sbjct: 252 MVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGV 311

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           +++ + +  K  +A  +  DM +   V +      +I  LCE GK+ EA  +W +ML + 
Sbjct: 312 MVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKN 371

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
           C PD    S++IH LC  G V EA KLF E    E  + P + TYN L+  +C++  +S 
Sbjct: 372 CMPDNAIMSTLIHWLCKEGKVWEARKLFGE---FERGAIPSLLTYNTLIAGMCEKGELSE 428

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           +  L + MM++G  P+  T N+ +    +   A +                     G +I
Sbjct: 429 AGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKE---------------------GIRI 467

Query: 623 VEVMLQKFLSPQTSTWERVVQELCR 647
           +E ML     P  ST+  +++ELC+
Sbjct: 468 LEEMLDNRCMPNKSTYAILIEELCK 492



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 24/241 (9%)

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD-MAKNNCVYNEV 473
            GKPD A      + +     +  + ++L+  F ++ +      ++K+  +K   + N  
Sbjct: 143 AGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVF 202

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             ++LI  LC+   +  A  V  +M + G  P+VV Y++++ G  + G +  A K+F E+
Sbjct: 203 TCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGEL 262

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
              +    PD  TY IL+N  C+Q  ++ +I L++ M + G +P+ VT  + + A     
Sbjct: 263 F--DRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAY---- 316

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                             K ++      +++ ML++   P ++   +V+  LC   +I+ 
Sbjct: 317 -----------------CKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEE 359

Query: 654 A 654
           A
Sbjct: 360 A 360


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 252/521 (48%), Gaps = 56/521 (10%)

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV--------DEFHCKRTV--- 154
           LYR R+  ++   + F  I   +  A  V++ +R+  T++        +E  C R     
Sbjct: 97  LYRSRKSDKLHKSQKFAEIRHLFNCAA-VDDGLRVPVTVIASLVDDACNESKCNRAKFKE 155

Query: 155 KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
           K F+ +  V     ++  ALE + H+          + L + L ++   R G VD+ ++ 
Sbjct: 156 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALR---RGGQVDSCLRF 212

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           FR M   + E  +Y+   ++DGLCK   ++    L+DE+   G     VT+N  I G  K
Sbjct: 213 FRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFK 272

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL--------------------------- 307
             +LG  A+++  M  +G   N VTY  LIHG                            
Sbjct: 273 RLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYV 332

Query: 308 --------CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
                   C  GN+ +A+ L D M     +P+  TYG +I+G+ K G+      ++  M+
Sbjct: 333 YTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ 392

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +   +N  I++TLI G  + G  ++A++L   M +KG + +   Y+++  GLC++ + D
Sbjct: 393 GKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKD 452

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA+ +LF M+  G + N  ++++L+  + + G   +A  ++++M +   V N + Y+VLI
Sbjct: 453 EAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLI 512

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G  + G ++EA  +  ++ +RG  PDV   +S+IHG C  G V+ ALKLF+EM    P+
Sbjct: 513 DGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEM----PQ 568

Query: 540 SQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
               P+V TY  +++ L K      +  L + M + G  PD
Sbjct: 569 RGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPD 609



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/332 (34%), Positives = 180/332 (54%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N +T+ L+I     +G ++ A +LF EM  +  E D+Y Y +++   C+   +  A++L 
Sbjct: 294 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 353

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM   G  P+  T+  LI+G+CK G++  A  LV+ M  KG   N V +NTLI G C  
Sbjct: 354 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCES 413

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D+A+ L   M       +   Y +I +GL KL R  +   +L SM ER    N   +
Sbjct: 414 GMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSF 473

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI    KEG   +A +++++M EKG  PN + Y+ LIDG  + G   EA ++  E+ N
Sbjct: 474 TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELEN 533

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   + +T +SL+ G    GK   A++++ +M +   V N V Y+ +I GL +DG+  E
Sbjct: 534 RGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEE 593

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           A  ++ +M   G  PD   YSS++  L +A S
Sbjct: 594 AFKLYDEMKETGLTPDDTVYSSLVGSLHSAES 625



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 177/398 (44%), Gaps = 39/398 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ + I+ Y    D   +  +L  M +E       ++  +   +     +EEA RLF  M
Sbjct: 262 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 321

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                                                  +   I  +   +  +I   CR
Sbjct: 322 ---------------------------------------REKGIEADVYVYTSIISCNCR 342

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A+ LF EM  +   P  +TY  L+ G+CK  +++ A +L++EMQ  G    PV 
Sbjct: 343 SGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVI 402

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI+G C++G +  A +L   M  KG   +   YN++  GLC     D+A  LL  MV
Sbjct: 403 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 462

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PN +++ T+I+   K G  V+  RV   MEE+    N   Y+ LI G  K G  +
Sbjct: 463 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 522

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A KL  ++  +G  P+    ++LI G C  GK D A ++  EM   G   N  TY++++
Sbjct: 523 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMI 582

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            G  + G+  +A +++ +M +     ++  YS L+  L
Sbjct: 583 SGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 156/555 (28%), Positives = 260/555 (46%), Gaps = 64/555 (11%)

Query: 123 FIFKAY---GKAHLV-----EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           FI  AY   G  HL+      EA++++  M+ E   K ++K++++++  + + G   + +
Sbjct: 197 FILNAYSYNGLIHLLLPGFCNEALKVYKRMISE-GMKPSMKTYSALMVALGRRGDTRKIM 255

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
              N +   K + + PN  T+ + I+ + R   +D+A  +F+EM    C PD+ TY  L+
Sbjct: 256 ---NLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLI 312

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           D LC   +LD+A  L  +M+     P  VT+  L++   K G+L    +  + M + G  
Sbjct: 313 DALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA 372

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+ VTY  LI  LC  G++D+A  +LD M      PN  TY T+I GL+K  R  +   +
Sbjct: 373 PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALEL 432

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           L +ME        + Y   I    K G    A+  ++ M ++G  P+    +A +  L  
Sbjct: 433 LENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAE 492

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G+  EAE+I  ++   G + ++ TY+ LMK + ++G+  KA ++  +M           
Sbjct: 493 TGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEM----------- 541

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
                                   +S+GC+PDV+  +S+I+ L  AG V+ A K+F  + 
Sbjct: 542 ------------------------ISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLK 577

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--- 591
            L  K  P V TYNILL  L K+  I  +++L  SM + GC P+ +T N  L  L +   
Sbjct: 578 NL--KLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDA 635

Query: 592 ---------KLEAPQDGTDFL--NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
                    ++       D L  N +   L +  R    F     M +KFLSP   T   
Sbjct: 636 VDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCT 694

Query: 641 VVQELCRPKRIQAAI 655
           ++  + R  R++ AI
Sbjct: 695 LIPGVVRHGRVEDAI 709



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 146/588 (24%), Positives = 275/588 (46%), Gaps = 56/588 (9%)

Query: 43   SAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYS-LIQHYANSGDFKS 101
            S  + N  + T  +    SE   +++IFN   K G     DS  Y+ L++ Y+ +G    
Sbjct: 479  SIAACNASLYTLAETGRISE---AEDIFNDLHKCGLSP--DSVTYNMLMKCYSKAGQIDK 533

Query: 102  LEMVLYRMRR---EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFN 158
               +L  M     E  V++  S I       KA  V+ A ++F  +        TV ++N
Sbjct: 534  ATQLLSEMISKGCEPDVMIINSLI---NTLYKAGRVDAAWKMFGRL-KNLKLAPTVVTYN 589

Query: 159  SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
             +L  + +EG   +ALE +  +  +      PNT+TFN ++  + +   VD A+++F  M
Sbjct: 590  ILLTGLGKEGKILKALELFGSMTES---GCPPNTITFNSLLDCLSKNDAVDLALKMFCRM 646

Query: 219  PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             + NC PD+ TY T++ GL +E R+D A     +M+     P  VT   LI G+ ++G +
Sbjct: 647  TMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRV 705

Query: 279  GRAAKLVDNMFLKGCL-PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA-SKCMPNEV--- 333
              A K+V     + CL  N   +  L+  +  +  +++A+S  + +V  S C  + V   
Sbjct: 706  EDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLP 765

Query: 334  --------------------------------TYGTIINGLVKLGRAVDGARVLMSMEER 361
                                            +Y  +++GL+          +   M+  
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 362  KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
              H N + Y+ L+    K  +      L+ +M  +GC+PN + ++ +I  L +    ++A
Sbjct: 826  GTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKA 885

Query: 422  EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             ++ +E+++   +    TY  L+ G  ++G+  +A++I+++M    C  N V Y++LI+G
Sbjct: 886  LDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILING 945

Query: 482  LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
              + G++  A  ++ +M+  G +PD+ +Y+ ++  LC  G ++EA++ F E+        
Sbjct: 946  FGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKL--TGLD 1003

Query: 542  PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            PD  +YN ++N L K   +  ++ L + M +RG  PDL T N  +  L
Sbjct: 1004 PDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHL 1051



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 139/493 (28%), Positives = 247/493 (50%), Gaps = 52/493 (10%)

Query: 130  KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
            K   V+ A+++F  M    +C   V ++N+++  +I+EG    A  F++ +   K ++  
Sbjct: 632  KNDAVDLALKMFCRMT-MMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM--KKFLS-- 686

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQL----------------------------------- 214
            P+ +T   +I  V R G V++AI++                                   
Sbjct: 687  PDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAIS 746

Query: 215  FREMPVRN--CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD-GCFPTPVTFNVLING 271
            F E+ V N  C+ D +    L+  LCK  +  +A  + D+   + G  PT  ++N L++G
Sbjct: 747  FAEILVCNSVCQDD-HVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDG 805

Query: 272  LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            L  +    +A +L ++M   G  PN  TYN L+        ++K   L   M +  C PN
Sbjct: 806  LLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPN 865

Query: 332  EVTYGTIINGLVK---LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             +T+  II+ LVK   L +A+D    LMS +   F      Y  LI GL K G++E AMK
Sbjct: 866  AITHNIIISALVKSNNLNKALDLYYELMSGD---FSPTPCTYGPLIDGLLKAGRSEQAMK 922

Query: 389  LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
            ++++M++ GC PN+V+Y+ LI+G  + G+ D A E+  +M+  G   +  +Y+ L++   
Sbjct: 923  IFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLC 982

Query: 449  ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             +G+  +AV+ ++++       + V Y+ +I+GL +  +L EA  ++++M +RG  PD+ 
Sbjct: 983  ITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLY 1042

Query: 509  AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
             Y+++I  L  AG V+ A+K++ E+  +    +P VFTYN L+       N   +  +  
Sbjct: 1043 TYNALILHLGIAGKVDVAVKMYEELQLV--GLEPSVFTYNALIRGHSLSGNKDQAFSVFK 1100

Query: 569  SMMDRGCDPDLVT 581
             MM  GC P+  T
Sbjct: 1101 KMMVVGCSPNTET 1113



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 151/542 (27%), Positives = 252/542 (46%), Gaps = 25/542 (4%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  ++EA+ L   M +    K T  S+   ++   + G   +A++ +  +   K   I+
Sbjct: 422 KARRLDEALELLENM-ESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETM---KKRGIM 477

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+    N  + T+   G +  A  +F ++      PD  TY  LM    K  ++D+A  L
Sbjct: 478 PSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQL 537

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L EM   GC P  +  N LIN L K G +  A K+   +      P  VTYN L+ GL  
Sbjct: 538 LSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGK 597

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFHVNEY 368
           +G + KA+ L   M  S C PN +T+ ++++ L K   AVD A ++   M     + +  
Sbjct: 598 EGKILKALELFGSMTESGCPPNTITFNSLLDCLSK-NDAVDLALKMFCRMTMMNCNPDVL 656

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+T+I GL +EG+ + A   + QM +K   P+ V    LI G+ R G+ ++A +++ E 
Sbjct: 657 TYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEF 715

Query: 429 INNGC-AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           ++  C   N+  +  LM+      +  +A+   + +  N+   ++     LI  LC+  K
Sbjct: 716 VHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKK 775

Query: 488 LREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
             +A+ V+ +     G  P + +Y+ ++ GL  +   E+AL+LF +M      + P+ FT
Sbjct: 776 ALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMK--SAGTHPNNFT 833

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQD------ 598
           YN+LL+A  K   I+   DL + M  RGC+P+ +T NI ++AL     L    D      
Sbjct: 834 YNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELM 893

Query: 599 GTDF------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
             DF         L   L K  R+    KI E ML     P +  +  ++    +   I 
Sbjct: 894 SGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEID 953

Query: 653 AA 654
            A
Sbjct: 954 FA 955



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 153/613 (24%), Positives = 267/613 (43%), Gaps = 65/613 (10%)

Query: 88   SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
            SLI     +G   +   +  R++  K      ++  +    GK   + +A+ LF +M  E
Sbjct: 555  SLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMT-E 613

Query: 148  FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
              C     +FNS+L+ + +      AL+ +  +     MN  P+ LT+N +I  + R G 
Sbjct: 614  SGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMT---MMNCNPDVLTYNTIIYGLIREGR 670

Query: 208  VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF-- 265
            +D A   F +M  +   PD  T CTL+ G+ +  R+++A+ ++ E     C  T   F  
Sbjct: 671  IDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWG 729

Query: 266  -------------------NVLI-NGLCKNGE--------LGRAAKLVD--NMFLK---- 291
                                +L+ N +C++          L +  K +D  N+F K    
Sbjct: 730  ELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKN 789

Query: 292  -GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
             G  P   +YN L+ GL      +KA+ L + M ++   PN  TY  +++   K  R   
Sbjct: 790  LGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINK 849

Query: 351  GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
               +   M  R    N   ++ +IS L K      A+ L+ ++M     P    Y  LID
Sbjct: 850  LYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLID 909

Query: 411  GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
            GL + G+ ++A +I  EM++ GC  N+  Y+ L+ GF +SG+   A E++K M K     
Sbjct: 910  GLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRP 969

Query: 471  NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
            +   Y++L+  LC  G++ EA   + ++   G  PD V+Y+ +I+GL  +  ++EAL LF
Sbjct: 970  DLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLF 1029

Query: 531  NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
            +EM        PD++TYN L+  L     +  ++ +   +   G +P + T N  +    
Sbjct: 1030 SEMK--NRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRG-- 1085

Query: 591  EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
              L   +D        A  +FK+    G             SP T T+ ++  +  R   
Sbjct: 1086 HSLSGNKDQ-------AFSVFKKMMVVG------------CSPNTETFAQLPNKYPRAGL 1126

Query: 651  IQAAINKCWSNLY 663
            +       +  L+
Sbjct: 1127 VHNPFGAVFIGLF 1139



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 189/377 (50%), Gaps = 10/377 (2%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           +++ L ++ R+++ V + D MQ    +    T+  +   L   G +GRA   +  M   G
Sbjct: 137 MLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVG 196

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            + N  +YN LIH L L G  ++A+ +  RM++    P+  TY  +   +V LGR  D  
Sbjct: 197 FILNAYSYNGLIH-LLLPGFCNEALKVYKRMISEGMKPSMKTYSAL---MVALGRRGDTR 252

Query: 353 RVLMSMEERK---FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +++  +EE K      N Y Y+  I  L +  + +DA  ++K+M ++GC P+ + Y+ LI
Sbjct: 253 KIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLI 312

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           D LC  GK D+A+E+  +M  +  + +  TY +LM  F + G        W +M  +   
Sbjct: 313 DALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA 372

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + V Y++LI  LC+ G +  A  +   M ++G  P++  Y++MI GL  A  ++EAL+L
Sbjct: 373 PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALEL 432

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              M  L  K  P  F+Y + ++   K  + + +ID   +M  RG  P +  CN  L  L
Sbjct: 433 LENMESLGVK--PTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490

Query: 590 KEKLEAPQDGTDFLNEL 606
            E      +  D  N+L
Sbjct: 491 AETGRI-SEAEDIFNDL 506


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 245/500 (49%), Gaps = 42/500 (8%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K Y     V  A++LF  +V E      V  F+ ++N   + G   +A E Y  +   
Sbjct: 331 LMKGYCVLGDVNLALQLFDEVV-EGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRM--- 386

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K M I PN    N +++      L+++A  LF E  V +   ++ TY  L+  L +  ++
Sbjct: 387 KLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDE-AVEHGITNVVTYNILLKWLGELGKV 445

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +EA  L ++M   G  P+ V++N LI G CK G + +A  ++ ++  +G  PN VTY  L
Sbjct: 446 NEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLL 505

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G   KG+ ++A  + ++M+A+   P + T+ T+INGL K GR  +    L +  ++ F
Sbjct: 506 IDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGF 565

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT--------------------- 402
                 Y+++I G FKEG  + A+  +++M E G  P+                      
Sbjct: 566 VSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALE 625

Query: 403 --------------VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
                         V YSALIDG C++   + A +   E+++ G   N   Y+S++ GF 
Sbjct: 626 MHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFI 685

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
                  A+ + ++M KN    +   Y+ +I GL ++GKL  A  ++++MLS+   PD+V
Sbjct: 686 HLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIV 745

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +I+GL N G +E A K+  EM        P V  YNIL+    ++ N+  +  L +
Sbjct: 746 MYTVLINGLSNNGQLENASKILKEMDG--NNITPSVLVYNILIAGNFREGNLQEAFRLHD 803

Query: 569 SMMDRGCDPDLVTCNIFLTA 588
            M+D+G  PD  T +I +  
Sbjct: 804 EMLDKGLVPDDTTYDILVNG 823



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 159/584 (27%), Positives = 276/584 (47%), Gaps = 40/584 (6%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D+  YS L+Q      D      +L  MR    V  + ++  +  A  K     EA+RL 
Sbjct: 254 DAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLK 313

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGL---------YHRALEFYNHIVNAKHMNILPNT 192
             MV          S    +NVI+   L          + AL+ ++ +V      ++P+ 
Sbjct: 314 DEMV----------SVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEG---GVVPDV 360

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           + F+++I    ++G ++ A +L+  M +   +P+++   +L++G  ++N L+ A  L DE
Sbjct: 361 VIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDE 420

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
             V+      VT+N+L+  L + G++  A  L + M  KG  P+ V+YN LI G C KG 
Sbjct: 421 -AVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGC 479

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +DKA S+L  ++     PN VTY  +I+G  K G +     V   M        ++ ++T
Sbjct: 480 MDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNT 539

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +I+GL K G+  +        +++G    ++ Y+++IDG  + G  D A     EM  +G
Sbjct: 540 VINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESG 599

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
            + +  TY+SL+ G  +S K   A+E+  DM       + V YS LI G C+   +  A 
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
             +T++L  G  P+ V Y+SMI G  +  ++E AL L  EM+  + K   D+  Y  ++ 
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI--KNKVPCDLQVYTSIIG 717

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK--------EKLEAPQDGTDF-- 602
            L K+  +S ++DL + M+ +   PD+V   + +  L          K+    DG +   
Sbjct: 718 GLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITP 777

Query: 603 ----LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
                N L    F+       F++ + ML K L P  +T++ +V
Sbjct: 778 SVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/441 (28%), Positives = 227/441 (51%), Gaps = 10/441 (2%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + + + + +L+E A  LF   V+  H    V ++N +L  + + G  + A   +  +V+ 
Sbjct: 401 LLEGFHEQNLLEHAYGLFDEAVE--HGITNVVTYNILLKWLGELGKVNEACNLWEKMVSK 458

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               I P+ +++N +I   C+ G +D A  + + +  R  +P+  TY  L+DG  K+   
Sbjct: 459 ---GITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDS 515

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           + A ++ ++M      PT  TFN +INGL K G +      ++N   +G +   +TYN++
Sbjct: 516 ERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSI 575

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G   +G +D A+     M  S   P+ +TY ++I+GL K  +      +   M+ +  
Sbjct: 576 IDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGM 635

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            ++   YS LI G  K    E A K + ++++ G  PNTVVY+++I G   +   + A  
Sbjct: 636 KLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALN 695

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EMI N    +   Y+S++ G  + GK   A++++ +M   + V + V Y+VLI+GL 
Sbjct: 696 LHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLS 755

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
            +G+L  A  +  +M      P V+ Y+ +I G    G+++EA +L +EML  +    PD
Sbjct: 756 NNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEML--DKGLVPD 813

Query: 544 VFTYNILLNALCKQSNISHSI 564
             TY+IL+N   K   +SH++
Sbjct: 814 DTTYDILVNGKLK---VSHTL 831



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 223/479 (46%), Gaps = 17/479 (3%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           ++  FN ++K+  R+  + +A++ FR M   +  P +     L+  + + N + +A  L 
Sbjct: 149 DSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLY 208

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM   G +    T +V++    K G+     K       +G   +   Y+ L+  +C +
Sbjct: 209 DEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRR 268

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
            +L+ A  LL  M     +P++ TY  +I   VK G  V+  R+   M      +N  + 
Sbjct: 269 LDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVT 328

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
            +L+ G    G    A++L+ +++E G  P+ V++S LI+G  +VG  ++A E+   M  
Sbjct: 329 RSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKL 388

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   N F  +SL++GF E      A  ++ D A  + + N V Y++L+  L E GK+ E
Sbjct: 389 MGIQPNVFIVNSLLEGFHEQNLLEHAYGLF-DEAVEHGITNVVTYNILLKWLGELGKVNE 447

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +W +M+S+G  P +V+Y+++I G C  G +++A  +   +  LE   +P+  TY +L
Sbjct: 448 ACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI--LERGLKPNAVTYTLL 505

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQDG-TDFL---- 603
           ++   K+ +   +  +   MM     P   T N  +  L +  ++   QD   +F+    
Sbjct: 506 IDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGF 565

Query: 604 -------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                  N +    FK             M +  +SP   T+  ++  LC+  +I  A+
Sbjct: 566 VSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLAL 624



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/332 (24%), Positives = 160/332 (48%), Gaps = 6/332 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI  +   GD +   +V  +M        + +F  +    GK   V E     +  
Sbjct: 501 TYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNF 560

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + +     ++ ++NS+++   +EG    AL  Y  +  +    I P+ +T+  +I  +C+
Sbjct: 561 IKQGFVSTSI-TYNSIIDGFFKEGAVDSALLAYREMCES---GISPDVITYTSLIDGLCK 616

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +  A+++  +M  +  + D+  Y  L+DG CK + ++ A     E+   G  P  V 
Sbjct: 617 SNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVV 676

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV-TYNTLIHGLCLKGNLDKAVSLLDRM 323
           +N +I+G      +  A  L   M +K  +P ++  Y ++I GL  +G L  A+ L   M
Sbjct: 677 YNSMISGFIHLNNMEAALNLHQEM-IKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEM 735

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           ++   +P+ V Y  +INGL   G+  + +++L  M+      +  +Y+ LI+G F+EG  
Sbjct: 736 LSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNL 795

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
           ++A +L  +M++KG  P+   Y  L++G  +V
Sbjct: 796 QEAFRLHDEMLDKGLVPDDTTYDILVNGKLKV 827



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 100/181 (55%), Gaps = 5/181 (2%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP-DIYTYC 231
           A +F+  +++   + + PNT+ +N +I     L  ++ A+ L +EM ++N  P D+  Y 
Sbjct: 658 ASKFFTELLD---IGLTPNTVVYNSMISGFIHLNNMEAALNLHQEM-IKNKVPCDLQVYT 713

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           +++ GL KE +L  A+ L  EM      P  V + VLINGL  NG+L  A+K++  M   
Sbjct: 714 SIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGN 773

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
              P+ + YN LI G   +GNL +A  L D M+    +P++ TY  ++NG +K+   + G
Sbjct: 774 NITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHTLGG 833

Query: 352 A 352
           +
Sbjct: 834 S 834


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 247/502 (49%), Gaps = 8/502 (1%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVD 146
           ++Q    +GD      ++ RM R +      +F +  +     ++    +A+++F  MVD
Sbjct: 163 VVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD 222

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
                  + ++N++++  ++ G         + ++   H    PN +T+N+++  +CR G
Sbjct: 223 MGVVPNWI-TYNTMIDGHVKGGDLEAGFRLRDQML---HDGPKPNIVTYNVLLSGLCRAG 278

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
            +D    L  EM   +  PD +TY  L DGL +       + L  E    G      T +
Sbjct: 279 RMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCS 338

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +L+NGLCK+G++ +A ++++ +   G +P  V YNTLI+G C   +L  A  + ++M + 
Sbjct: 339 ILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
              P+ +TY  +INGL KL        ++M ME+     +   ++TLI      G+ E  
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
             +   M +KG K + + + +++   C+ GK  EA  IL +MI    A NA  Y+S++  
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           + ESG   +A  + + M  +    + V Y++L+ GLC   ++ EA  +   + ++G +PD
Sbjct: 519 YIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           VV+Y+++I   CN G  ++AL+L  EM   +   +P + TY+ L++AL     +     L
Sbjct: 579 VVSYNTIISACCNKGDTDKALELLQEM--NKYGIRPTLRTYHTLVSALASAGRVHDMECL 636

Query: 567 LNSMMDRGCDPDLVTCNIFLTA 588
              M+ +  +P      I + A
Sbjct: 637 YQQMLHKNVEPSSSIYGIMVDA 658



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 225/439 (51%), Gaps = 15/439 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+N V+  + + G    AL+ ++ +V+   M ++PN +T+N +I    + G ++   +L 
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVD---MGVVPNWITYNTMIDGHVKGGDLEAGFRLR 252

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M     +P+I TY  L+ GLC+  R+DE  +L+DEM     FP   T+++L +GL + 
Sbjct: 253 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 312

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           GE      L      KG +    T + L++GLC  G + KA  +L+ +V +  +P  V Y
Sbjct: 313 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 372

Query: 336 GTIINGLVKLGRAVDGAR-VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
            T+ING  ++ R + GA  +   M+ R    +   Y+ LI+GL K      A  L  +M 
Sbjct: 373 NTLINGYCQV-RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           + G  P+   ++ LID     G+ ++   +L +M   G  ++  ++ S++K F ++GK  
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +AV I  DM   +   N   Y+ +I    E G   +A ++  +M + G    +V Y+ ++
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 551

Query: 515 HGLCNAGSVEEALKLF----NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
            GLC +  ++EA +L     N+ L      +PDV +YN +++A C + +   +++LL  M
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGL------RPDVVSYNTIISACCNKGDTDKALELLQEM 605

Query: 571 MDRGCDPDLVTCNIFLTAL 589
              G  P L T +  ++AL
Sbjct: 606 NKYGIRPTLRTYHTLVSAL 624



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 156/336 (46%), Gaps = 18/336 (5%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNA-----------------KHMNILPNTLTFN 196
           V     VL +++  GL    +  YN ++N                  K  +I P+ +T+N
Sbjct: 350 VAKAEQVLEMLVHTGLVPTTV-IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 408

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I  +C+L +V  A  L  EM     +P + T+ TL+D      +L++   +L +MQ  
Sbjct: 409 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G     ++F  ++   CKNG++  A  ++D+M  K   PN   YN++I      G+ ++A
Sbjct: 469 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 528

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             L+++M  S    + VTY  ++ GL +  +  +   ++ ++  +    +   Y+T+IS 
Sbjct: 529 FLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 588

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
              +G  + A++L ++M + G +P    Y  L+  L   G+  + E +  +M++     +
Sbjct: 589 CCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPS 648

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           +  Y  ++  +       K   + K+M++    +++
Sbjct: 649 SSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 21/177 (11%)

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           ++L+  L   G+  + R  +  +++ G +PD  A++ ++     AG ++ AL +   M  
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGR 185

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
            E    PD F+YN+++  L +    S ++ + + M+D G  P+ +T N  +         
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMI--------- 236

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
             DG            K      GF++ + ML     P   T+  ++  LCR  R+ 
Sbjct: 237 --DGH----------VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMD 281



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 77/172 (44%), Gaps = 4/172 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + S+I  Y  SGD +   +++ +M+         ++  + K   ++  ++EA  L +T+ 
Sbjct: 512 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           ++   +  V S+N++++    +G   +ALE    +       I P   T++ ++  +   
Sbjct: 572 NQ-GLRPDVVSYNTIISACCNKGDTDKALELLQEM---NKYGIRPTLRTYHTLVSALASA 627

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           G V +   L+++M  +N EP    Y  ++D   +     +   L  EM   G
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/419 (32%), Positives = 210/419 (50%), Gaps = 11/419 (2%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A   Y  +V +    +LP+ +T + ++  +CR G    A  LFREM      P+  TYCT
Sbjct: 276 AFSLYEGMVRS---GVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCT 332

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+D L K  R  E++ LL EM   G     V +  L++ L K G++  A  ++ +     
Sbjct: 333 LIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDN 392

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK---LGRAV 349
             PN VTY  L+   C  GN+D A  +L +M     +PN VT+ +IINGLVK   LG+A 
Sbjct: 393 ITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAA 452

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           D  R    M++     N   Y TLI G FK    E A+ +++ M+ +G + N  V  +L+
Sbjct: 453 DYMR---KMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLV 509

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           +GL + G  + AE +  +M   G   +   Y++LM G F++G    A ++ +++ + N  
Sbjct: 510 NGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLS 569

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + V Y+V I+ LC  GK  EA+    +M + G +PD   Y++MI   C  G   +ALKL
Sbjct: 570 PDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKL 629

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
             EM       +P++ TY  L+  L +   +  +  LLN M   G  P  +T    L A
Sbjct: 630 LKEM--KRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA 686



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 152/576 (26%), Positives = 262/576 (45%), Gaps = 78/576 (13%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SL+  + +SGD  +   V+ RM+ +       ++  +   Y K   ++EA  L+  MV
Sbjct: 225 YNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMV 284

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR- 204
                   V + +++++ + ++G +  A   +  +     + + PN +T+  +I ++ + 
Sbjct: 285 RSGVLPDVV-TLSALVDGLCRDGQFSEAYALFREM---DKIGVAPNHVTYCTLIDSLAKA 340

Query: 205 ------LGL----------------------------VDNAIQLFREMPVRNCEPDIYTY 230
                 LGL                            ++ A  + R     N  P+  TY
Sbjct: 341 RRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTY 400

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             L+D  C+   +D A  +L +M+     P  VTF+ +INGL K G LG+AA  +  M  
Sbjct: 401 TVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKD 460

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            G  PN VTY TLI G       + A+ +   M+      N     +++NGL K G  ++
Sbjct: 461 SGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGN-IE 519

Query: 351 GARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           GA  L   M+ER   ++   Y+TL+ GLFK G    A K+ +++MEK   P+ VVY+  I
Sbjct: 520 GAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFI 579

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           + LC +GK  EA+  L EM N G   +  TY++++      GK  KA+++ K+M +N+  
Sbjct: 580 NCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIK 639

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP------------------------ 505
            N + Y+ L+ GL E G +++A+ +  +M S G  P                        
Sbjct: 640 PNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEI 699

Query: 506 -----------DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
                      D+  Y++++H LC  G    A  + +EML       PD  T+N L+   
Sbjct: 700 HELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLT--RGIAPDTITFNALILGH 757

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           CK S++ ++  +   M+ +G  P++ T N  L  L+
Sbjct: 758 CKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLE 793



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/498 (28%), Positives = 230/498 (46%), Gaps = 28/498 (5%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V  +NS++      G    ALE    +   K   + PN +T+  +I   C+   +D A  
Sbjct: 222 VVGYNSLVAGFFHSGDADAALEVVERM---KADGVEPNVVTYTALIGEYCKGKGMDEAFS 278

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L+  M      PD+ T   L+DGLC++ +  EA  L  EM   G  P  VT+  LI+ L 
Sbjct: 279 LYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLA 338

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K      +  L+  M  +G + + V Y  L+  L  +G +++A  +L    +    PN V
Sbjct: 339 KARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFV 398

Query: 334 TYGTIINGLVKLGRAVDGA-RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           TY  +++   + G  +DGA +VL+ MEE+    N   +S++I+GL K G    A    ++
Sbjct: 399 TYTVLVDAHCRAGN-IDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRK 457

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M + G  PN V Y  LIDG  +    + A ++  +M++ G  AN F   SL+ G  ++G 
Sbjct: 458 MKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGN 517

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A  ++KDM +   + + V Y+ L+ GL + G +  A  V  +++ +   PD V Y+ 
Sbjct: 518 IEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNV 577

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
            I+ LC  G   EA     EM       +PD  TYN ++ A C++   S ++ LL  M  
Sbjct: 578 FINCLCTLGKFSEAKSFLKEM--RNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKR 635

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
               P+L+T    +  L E     +     LNE+A         S GF           +
Sbjct: 636 NSIKPNLITYTTLVVGLLEA-GVVKKAKFLLNEMA---------SAGF-----------A 674

Query: 633 PQTSTWERVVQELCRPKR 650
           P + T +RV+Q     +R
Sbjct: 675 PTSLTHQRVLQACSGSRR 692



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 214/478 (44%), Gaps = 42/478 (8%)

Query: 150 CKRTVK----SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           CKR V     + ++ L  + + GL   A      +V  + ++ L + + +N +I   C++
Sbjct: 142 CKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGL-DVVGWNALIDGYCKV 200

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
             +  A+ +   M  +    D+  Y +L+ G       D A+ +++ M+ DG  P  VT+
Sbjct: 201 QDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTY 260

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             LI   CK   +  A  L + M   G LP+ VT + L+ GLC  G   +A +L   M  
Sbjct: 261 TALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDK 320

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               PN VTY T+I+ L K  R  +   +L  M  R   ++  +Y+ L+  L KEGK E+
Sbjct: 321 IGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEE 380

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM----------------- 428
           A  + +        PN V Y+ L+D  CR G  D AE++L +M                 
Sbjct: 381 AKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIIN 440

Query: 429 --INNGC----------------AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
             +  GC                A N  TY +L+ GFF+      A+++++DM       
Sbjct: 441 GLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEA 500

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N      L++GL ++G +  A  ++  M  RG   D V Y++++ GL   G++  A K+ 
Sbjct: 501 NNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVG 560

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            E+  +E    PD   YN+ +N LC     S +   L  M + G +PD  T N  + A
Sbjct: 561 QEL--MEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAA 616



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 148/605 (24%), Positives = 264/605 (43%), Gaps = 62/605 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T  +L+      G F     +   M +        ++  +  +  KA    E++ L   M
Sbjct: 294 TLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEM 353

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V        V  + ++++ + +EG    A +   H   A+  NI PN +T+ +++   CR
Sbjct: 354 VSRGVVMDLVM-YTALMDRLGKEGKIEEAKDVLRH---AQSDNITPNFVTYTVLVDAHCR 409

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +D A Q+  +M  ++  P++ T+ ++++GL K   L +A   + +M+  G  P  VT
Sbjct: 410 AGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVT 469

Query: 265 FNVLI-----------------------------------NGLCKNGELGRAAKLVDNMF 289
           +  LI                                   NGL KNG +  A  L  +M 
Sbjct: 470 YGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMD 529

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            +G L + V Y TL+ GL   GN+  A  +   ++     P+ V Y   IN L  LG+  
Sbjct: 530 ERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFS 589

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           +    L  M       ++  Y+T+I+   +EGK   A+KL K+M     KPN + Y+ L+
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLV 649

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            GL   G   +A+ +L EM + G A  + T+  +++    S +    +EI + M      
Sbjct: 650 VGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLH 709

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +   Y+ L+H LC  G  R A +V  +ML+RG  PD + ++++I G C +  ++ A  +
Sbjct: 710 ADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAI 769

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + +M  L     P++ T+N LL  L     I  +  +L+ M   G +P+ +T +I +T  
Sbjct: 770 YAQM--LHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGY 827

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
            +K    +         A+RL+              M+ K   P+ ST+  ++ +  +  
Sbjct: 828 AKKSNKVE---------ALRLYCE------------MVSKGFIPKASTYNSLMSDFAKAG 866

Query: 650 RIQAA 654
            +  A
Sbjct: 867 MMNQA 871



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 236/531 (44%), Gaps = 47/531 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  L+  +  +G+    E VL +M  +  +    +F  I     K   + +A      M
Sbjct: 399 TYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKM 458

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D       V ++ ++++   +      AL+ Y  ++   H  +  N    + ++  + +
Sbjct: 459 KDSGIAPNVV-TYGTLIDGFFKFQGQEAALDVYRDML---HEGVEANNFVVDSLVNGLRK 514

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A  LF++M  R    D   Y TLMDGL K   +  A  +  E+      P  V 
Sbjct: 515 NGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVV 574

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NV IN LC  G+   A   +  M   G  P++ TYNT+I   C +G   KA+ LL  M 
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMK 634

Query: 325 ASKCMPNEVTYGTIINGLVKLG----------------------------RAVDGAR--- 353
            +   PN +TY T++ GL++ G                            +A  G+R   
Sbjct: 635 RNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPD 694

Query: 354 VLMSMEE----RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
           V++ + E       H +  +Y+TL+  L   G A +A  +  +M+ +G  P+T+ ++ALI
Sbjct: 695 VILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALI 754

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
            G C+    D A  I  +M++ G + N  T+++L+ G   +G+  +A  +  DM K    
Sbjct: 755 LGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLE 814

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            N + Y +L+ G  +     EA  ++ +M+S+G  P    Y+S++     AG + +A +L
Sbjct: 815 PNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKEL 874

Query: 530 FNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           F+EM     L   S     TY+ILLN   K  N      LL  M + G  P
Sbjct: 875 FSEMKRRGVLHTSS-----TYDILLNGWSKLRNGIEVRILLKDMKELGFKP 920



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 135/514 (26%), Positives = 222/514 (43%), Gaps = 63/514 (12%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFR---------------------------------- 216
           +TLT N +I + C L  +  A+ L R                                  
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 217 -----EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM----QVDGCFPTPVTFNV 267
                EM  R    D  T  T + GLC+   + EA  L + +     +DG     V +N 
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGL--DVVGWNA 192

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           LI+G CK  ++  A  +V+ M  +G   + V YN+L+ G    G+ D A+ +++RM A  
Sbjct: 193 LIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADG 252

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI-YSTLISGLFKEGKAEDA 386
             PN VTY  +I    K G+ +D A  L     R   + + +  S L+ GL ++G+  +A
Sbjct: 253 VEPNVVTYTALIGEYCK-GKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEA 311

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
             L+++M + G  PN V Y  LID L +  +  E+  +L EM++ G   +   Y++LM  
Sbjct: 312 YALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDR 371

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             + GK  +A ++ +    +N   N V Y+VL+   C  G +  A  V  QM  +   P+
Sbjct: 372 LGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPN 431

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           VV +SS+I+GL   G + +A     +M   +    P+V TY  L++   K      ++D+
Sbjct: 432 VVTFSSIINGLVKRGCLGKAADYMRKM--KDSGIAPNVVTYGTLIDGFFKFQGQEAALDV 489

Query: 567 LNSMMDRGCDPDLVTCNIFLTALK--------EKLEAPQDGTDFL------NELAIRLFK 612
              M+  G + +    +  +  L+        E L    D    L        L   LFK
Sbjct: 490 YRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFK 549

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                  FK+ + +++K LSP    +   +  LC
Sbjct: 550 TGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLC 583



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 174/382 (45%), Gaps = 11/382 (2%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N  +N +   G +  A  F   + N     + P+  T+N +I   CR G    A++L +
Sbjct: 575 YNVFINCLCTLGKFSEAKSFLKEMRNT---GLEPDQATYNTMIAARCREGKTSKALKLLK 631

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM   + +P++ TY TL+ GL +   + +A  LL+EM   G  PT +T   ++   C   
Sbjct: 632 EMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA-CSGS 690

Query: 277 ELGRAAKLVDNMFLKGCLPNEVT-YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
                   +  + +   L  ++T YNTL+H LC  G    A  +LD M+     P+ +T+
Sbjct: 691 RRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITF 750

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +I G  K     +   +   M  +    N   ++TL+ GL   G+  +A  +   M +
Sbjct: 751 NALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKK 810

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G +PN + Y  L+ G  +     EA  +  EM++ G    A TY+SLM  F ++G  ++
Sbjct: 811 VGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQ 870

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR---EARMVWTQMLSRGCKPDVVAYSS 512
           A E++ +M +   ++    Y +L++G     KLR   E R++   M   G KP     SS
Sbjct: 871 AKELFSEMKRRGVLHTSSTYDILLNGWS---KLRNGIEVRILLKDMKELGFKPSKGTISS 927

Query: 513 MIHGLCNAGSVEEALKLFNEML 534
           M       G   EA +L   + 
Sbjct: 928 MSRAFSRPGMTGEARRLLKTLF 949



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 4/369 (1%)

Query: 97  GDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKS 156
           G F   +  L  MR       + ++  +  A  +     +A++L   M      K  + +
Sbjct: 586 GKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEM-KRNSIKPNLIT 644

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           + +++  +++ G+  +A    N + +A      P +LT   V++        D  +++  
Sbjct: 645 YTTLVVGLLEAGVVKKAKFLLNEMASA---GFAPTSLTHQRVLQACSGSRRPDVILEIHE 701

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            M       DI  Y TL+  LC       A ++LDEM   G  P  +TFN LI G CK+ 
Sbjct: 702 LMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSS 761

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L  A  +   M  +G  PN  T+NTL+ GL   G + +A ++L  M      PN +TY 
Sbjct: 762 HLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYD 821

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++ G  K    V+  R+   M  + F      Y++L+S   K G    A +L+ +M  +
Sbjct: 822 ILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRR 881

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G    +  Y  L++G  ++    E   +L +M   G   +  T SS+ + F   G   +A
Sbjct: 882 GVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEA 941

Query: 457 VEIWKDMAK 465
             + K + K
Sbjct: 942 RRLLKTLFK 950



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 21/186 (11%)

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           + V Y++ +  L E G  R A  V ++M  RG   D V  S+ + GLC  G V EA  L 
Sbjct: 114 DTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALA 173

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
             ++        DV  +N L++  CK  +++ ++ ++  M  +G   D+V          
Sbjct: 174 EMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVG--------- 224

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                        N L    F         ++VE M    + P   T+  ++ E C+ K 
Sbjct: 225 ------------YNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKG 272

Query: 651 IQAAIN 656
           +  A +
Sbjct: 273 MDEAFS 278


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 252/521 (48%), Gaps = 56/521 (10%)

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV--------DEFHCKRTV--- 154
           LYR R+  ++   + F  I   +  A  V++ +R+  T++        +E  C R     
Sbjct: 101 LYRSRKSDKLHKSQKFAEIRHLFNCAA-VDDGLRVPVTVIASLVDDACNESKCNRAKFKE 159

Query: 155 KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
           K F+ +  V     ++  ALE + H+          + L + L ++   R G VD+ ++ 
Sbjct: 160 KFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALR---RGGQVDSCLRF 216

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           FR M   + E  +Y+   ++DGLCK   ++    L+DE+   G     VT+N  I G  K
Sbjct: 217 FRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFK 276

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL--------------------------- 307
             +LG  A+++  M  +G   N VTY  LIHG                            
Sbjct: 277 RLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYV 336

Query: 308 --------CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
                   C  GN+ +A+ L D M     +P+  TYG +I+G+ K G+      ++  M+
Sbjct: 337 YTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQ 396

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +   +N  I++TLI G  + G  ++A++L   M +KG + +   Y+++  GLC++ + D
Sbjct: 397 GKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKD 456

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA+ +LF M+  G + N  ++++L+  + + G   +A  ++++M +   V N + Y+VLI
Sbjct: 457 EAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLI 516

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
            G  + G ++EA  +  ++ +RG  PDV   +S+IHG C  G V+ ALKLF+EM    P+
Sbjct: 517 DGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEM----PQ 572

Query: 540 SQ--PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
               P+V TY  +++ L K      +  L + M + G  PD
Sbjct: 573 RGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPD 613



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 179/330 (54%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N +T+ L+I     +G ++ A +LF EM  +  E D+Y Y +++   C+   +  A++L 
Sbjct: 298 NVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLF 357

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEM   G  P+  T+  LI+G+CK G++  A  LV+ M  KG   N V +NTLI G C  
Sbjct: 358 DEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCES 417

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G +D+A+ L   M       +   Y +I +GL KL R  +   +L SM ER    N   +
Sbjct: 418 GMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSF 477

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           +TLI    KEG   +A +++++M EKG  PN + Y+ LIDG  + G   EA ++  E+ N
Sbjct: 478 TTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELEN 537

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   + +T +SL+ G    GK   A++++ +M +   V N V Y+ +I GL +DG+  E
Sbjct: 538 RGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEE 597

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           A  ++ +M   G  PD   YSS++  L +A
Sbjct: 598 AFKLYDEMKETGLTPDDTVYSSLVGSLHSA 627



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 177/398 (44%), Gaps = 39/398 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ + I+ Y    D   +  +L  M +E       ++  +   +     +EEA RLF  M
Sbjct: 266 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                                                  +   I  +   +  +I   CR
Sbjct: 326 ---------------------------------------REKGIEADVYVYTSIISCNCR 346

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A+ LF EM  +   P  +TY  L+ G+CK  +++ A +L++EMQ  G    PV 
Sbjct: 347 SGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVI 406

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           FN LI+G C++G +  A +L   M  KG   +   YN++  GLC     D+A  LL  MV
Sbjct: 407 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMV 466

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PN +++ T+I+   K G  V+  RV   MEE+    N   Y+ LI G  K G  +
Sbjct: 467 ERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMK 526

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A KL  ++  +G  P+    ++LI G C  GK D A ++  EM   G   N  TY++++
Sbjct: 527 EAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMI 586

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            G  + G+  +A +++ +M +     ++  YS L+  L
Sbjct: 587 SGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 201/408 (49%), Gaps = 25/408 (6%)

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           +A    + P+  TFN VI  +CR+G +  A  + +++      P + TY +L+DG CK+ 
Sbjct: 181 SALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240

Query: 242 ---RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
               +    +LL EM   G  PT VTF VLING CKN     A ++ + M  +G   + V
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TYN+LI GLC +G +++ V L++ M      PNE+T+G ++ G  K G   D    +  M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            ER    +  IY+ LI    + GK EDAM + + M +KG  PN   Y+ LI G  R G  
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             A  +L EM   G  A+  TY+ L+      G+  KAV++  +M++     N + Y+ +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CL 536
           I G C+ G ++ A  + T+M     + +VV Y+  I   C  G ++EA  L NEML  CL
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
            P       TY  +                   MM++G  PD+  C +
Sbjct: 541 VPNG----ITYETIKEG----------------MMEKGYTPDIRGCTV 568



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 210/421 (49%), Gaps = 5/421 (1%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +    H    P+T + N ++  +     VD A + FR    R   PDIYT+ T++ GLC+
Sbjct: 144 LAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCR 203

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG---RAAKLVDNMFLKGCLPN 296
             +L +A  +  +++  G  P+  T+N LI+G CK G  G       L+  M   G  P 
Sbjct: 204 IGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPT 263

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VT+  LI+G C   N   AV + + M       + VTY ++I+GL   G+  +G +++ 
Sbjct: 264 AVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME 323

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            ME+     NE  +  ++ G  K+G   DA      M E+  +P+ V+Y+ LID   R+G
Sbjct: 324 EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLG 383

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K ++A  +   M   G + N  TY+ L+ GF  SG    A  +  +M +     + V Y+
Sbjct: 384 KMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           VLI  LC  G++R+A  +  +M   G +P+ + Y+++I G C+ G+++ A ++   M   
Sbjct: 444 VLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM--E 501

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
           + + + +V TYN+ +   C+   +  + DLLN M+D+   P+ +T       + EK   P
Sbjct: 502 KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTP 561

Query: 597 Q 597
            
Sbjct: 562 D 562



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 170/395 (43%), Gaps = 55/395 (13%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P+  + N L+ GL     +  A K   +   +   P+  T+NT+I GLC  G L KA  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              + A    P+  TY ++I+G  K G A +            +HV+             
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGN-----------MYHVD------------- 249

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
                    L K+M+E G  P  V +  LI+G C+      A  +  EM   G AA+  T
Sbjct: 250 --------MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+SL+ G    GK  + V++ ++M       NE+ +  ++ G C+ G + +A      M 
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            R  +PDVV Y+ +I      G +E+A+ +   M   +    P+V TYN L+    +  +
Sbjct: 362 ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA--KKGISPNVTTYNCLITGFSRSGD 419

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
              +  LL+ M ++G + D+VT N+ + AL  K E  +                      
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRK---------------------A 458

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            K+++ M +  L P   T+  ++Q  C    I++A
Sbjct: 459 VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA 493


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 254/507 (50%), Gaps = 8/507 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+ ++ +  +  G  +     L +MR    V+   S+  +     K+    EA+ ++  
Sbjct: 156 NTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 215

Query: 144 MV-DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           M+ D F  + ++++++S++   +  G           +   + + + PN  TF + I+ +
Sbjct: 216 MILDGF--RPSLQTYSSLM---VGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVL 270

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
            R G ++ A ++ + M    C PD+ TY  L+D LC   +LD A  +  +M+     P  
Sbjct: 271 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDR 330

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+  L++    N +L    +    M   G +P+ VT+  L+  LC  GN  +A + LD 
Sbjct: 331 VTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDV 390

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M     +PN  TY T+I GL+++ R  D   +  +ME        Y Y   I    K G 
Sbjct: 391 MRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGD 450

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           +  A++ +++M  KG  PN V  +A +  L + G+  EA++I + + + G   ++ TY+ 
Sbjct: 451 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 510

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           +MK + + G+  +A+++  +M +N C  + +  + LI+ L +  ++ EA  ++ +M    
Sbjct: 511 MMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 570

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            KP VV Y++++ GL   G ++EA++LF  M  ++    P+  T+N L + LCK   ++ 
Sbjct: 571 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGM--VQKGCPPNTITFNTLFDCLCKNDEVTL 628

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           ++ +L  MMD GC PD+ T N  +  L
Sbjct: 629 ALKMLFKMMDMGCVPDVFTYNTIIFGL 655



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/546 (26%), Positives = 257/546 (47%), Gaps = 50/546 (9%)

Query: 83   DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
            +++ YSL    A +G  +  + + Y ++    V    ++  + K Y K   ++EAI+L  
Sbjct: 474  NASLYSL----AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 529

Query: 143  TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             MV E  C+  V   NS++N + +     R  E +   +  K M + P  +T+N ++  +
Sbjct: 530  EMV-ENCCEPDVIVVNSLINTLYKA---DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 585

Query: 203  CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
             + G +  AI+LF  M  + C P+  T+ TL D LCK + +  A+ +L +M   GC P  
Sbjct: 586  GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 645

Query: 263  VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV----- 317
             T+N +I GL KNG++  A      M  K   P+ VT  TL+ G+   G ++ A      
Sbjct: 646  FTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIAN 704

Query: 318  ---------------SLLDRMVASKCMPNEVTYGT--IINGLVKLGRAV----------- 349
                            L+  ++A   + N V++    + NG+ + G ++           
Sbjct: 705  FLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKH 764

Query: 350  ---DGARVLMSMEERKFHVNEYI--YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
                GAR+L     +   V   +  Y+ LI GL +    E A  ++ Q+   GC P+   
Sbjct: 765  NNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVAT 824

Query: 405  YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
            Y+ L+D   + GK DE  EI  EM  + C  N  T++ ++ G  ++G    A++++ D+ 
Sbjct: 825  YNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLM 884

Query: 465  KNNCVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
             +       C Y  LI GL + G+L EA+ ++  M   GC+P+   Y+ +I+G   AG  
Sbjct: 885  SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEA 944

Query: 524  EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            + A  LF  M+  +   +PD+ TY++L++ LC    +   +     + + G +PD+V  N
Sbjct: 945  DAACALFKRMV--KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYN 1002

Query: 584  IFLTAL 589
            + +  L
Sbjct: 1003 LIINGL 1008



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 154/576 (26%), Positives = 266/576 (46%), Gaps = 67/576 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++I     YGK+     A+  F  M  +      V + N+ L  + + G    A + +  
Sbjct: 437 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIV-ACNASLYSLAKAGRDREAKQIFYG 495

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   K + ++P+++T+N+++K   ++G +D AI+L  EM    CEPD+    +L++ L K
Sbjct: 496 L---KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYK 552

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
            +R+DEA  +   M+     PT VT+N L+ GL KNG++  A +L + M  KGC PN +T
Sbjct: 553 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 612

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +NTL   LC    +  A+ +L +M+   C+P+  TY TII GLVK G+ V  A       
Sbjct: 613 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQ-VKEAMCFFHQM 671

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKL----------------WKQMM-----EKGC 398
           ++  + +     TL+ G+ K G  EDA K+                W+ +M     E G 
Sbjct: 672 KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGI 731

Query: 399 KPNTVVYSA--LIDGLCRVGKP--------------DEAEEILFEMINN--GCAANAFTY 440
             N V +S   + +G+CR G                     +LFE      G      TY
Sbjct: 732 D-NAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTY 790

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           + L+ G  E+     A +++  +    C+ +   Y+ L+    + GK+ E   ++ +M +
Sbjct: 791 NLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSA 850

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
             C+P+ + ++ +I GL  AG+V++AL L+ +++  +    P   TY  L++ L K   +
Sbjct: 851 HECEPNTITHNIVISGLVKAGNVDDALDLYYDLMS-DRDFSPTACTYGPLIDGLSKSGRL 909

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
             +  L   M D GC P+    NI +    +  EA         + A  LFKR       
Sbjct: 910 YEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEA---------DAACALFKR------- 953

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                M+++ + P   T+  +V  LC   R+   ++
Sbjct: 954 -----MVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 984



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 150/645 (23%), Positives = 276/645 (42%), Gaps = 104/645 (16%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  LI     +      + V  +M+  +      ++I +   +     ++   + +  M
Sbjct: 297 TYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEM 356

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             + H    V +F  +++ + + G +  A   +  +   +   ILPN  T+N +I  + R
Sbjct: 357 EKDGHVPDVV-TFTILVDALCKAGNFGEA---FAKLDVMRDQGILPNLHTYNTLICGLLR 412

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +  +D+A+++F  M     +P  YTY   +D   K      A+   ++M+  G  P  V 
Sbjct: 413 VHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 472

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            N  +  L K G    A ++   +   G +P+ VTYN ++      G +D+A+ LL  MV
Sbjct: 473 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMV 532

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            + C P+ +   ++IN L K  R  +  ++ M M+E K       Y+TL++GL K GK +
Sbjct: 533 ENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 592

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A++L++ M++KGC PNT+ ++ L D LC+  +   A ++LF+M++ GC  + FTY++++
Sbjct: 593 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 652

Query: 445 KGFFESGKGHKAV----------------------------------------------- 457
            G  ++G+  +A+                                               
Sbjct: 653 FGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQ 712

Query: 458 ---EIWKDMAKN----NCVYNEVCYS--VLIHGLCEDG---------------KLREARM 493
                W+D+  +      + N V +S  ++ +G+C DG                   ARM
Sbjct: 713 PANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARM 772

Query: 494 VWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNI 549
           ++ +     G +P +  Y+ +I GL  A  +E A  +F     L+ K+    PDV TYN 
Sbjct: 773 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-----LQVKNTGCIPDVATYNF 827

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           LL+A  K   I    ++   M    C+P+ +T NI ++ L  K     D  D   +L   
Sbjct: 828 LLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLV-KAGNVDDALDLYYDL--- 883

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                           M  +  SP   T+  ++  L +  R+  A
Sbjct: 884 ----------------MSDRDFSPTACTYGPLIDGLSKSGRLYEA 912



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 143/576 (24%), Positives = 256/576 (44%), Gaps = 72/576 (12%)

Query: 108  RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE 167
            RM+  K      ++  +    GK   ++EAI LF  MV +  C     +FN++ + + + 
Sbjct: 565  RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLCKN 623

Query: 168  GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
                 AL+    +++   M  +P+  T+N +I  + + G V  A+  F +M  +   PD 
Sbjct: 624  DEVTLALKMLFKMMD---MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 679

Query: 228  YTYCTLMDGLCKENRLDEAVL--------------------LLDEMQVDGCFPTPVTFN- 266
             T CTL+ G+ K   +++A                      L+  +  +      V+F+ 
Sbjct: 680  VTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSE 739

Query: 267  -VLINGLCKNGEL--------------GRAAKLVDNMFLK--GCLPNEVTYNTLIHGLCL 309
             ++ NG+C++G+                  A+++   F K  G  P   TYN LI GL  
Sbjct: 740  RLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLE 799

Query: 310  KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
               ++ A  +  ++  + C+P+  TY  +++   K G+  +   +   M   +   N   
Sbjct: 800  ADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTIT 859

Query: 370  YSTLISGLFKEGKAEDAMKLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            ++ +ISGL K G  +DA+ L+  +M ++   P    Y  LIDGL + G+  EA+++   M
Sbjct: 860  HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 919

Query: 429  INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
             + GC  N   Y+ L+ GF ++G+   A  ++K M K     +   YSVL+  LC  G++
Sbjct: 920  SDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 979

Query: 489  REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVF 545
             E    + ++   G  PDVV Y+ +I+GL     +EEAL LFNEM     KS+   PD++
Sbjct: 980  DEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEM----KKSRGITPDLY 1035

Query: 546  TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
            TYN L+  L     +  +  + N +   G +P++ T N  +                   
Sbjct: 1036 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS------------- 1082

Query: 606  LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
                     +    + + + M+    SP T T+E++
Sbjct: 1083 --------GKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 174/365 (47%), Gaps = 7/365 (1%)

Query: 82   GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRL 140
            GDS    +I++     +     M+  +  ++  V  +  ++  +     +A ++E A  +
Sbjct: 750  GDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDV 809

Query: 141  FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
            F   V    C   V ++N +L+   + G      E Y  +  + H    PNT+T N+VI 
Sbjct: 810  F-LQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM--SAH-ECEPNTITHNIVIS 865

Query: 201  TVCRLGLVDNAIQLFRE-MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             + + G VD+A+ L+ + M  R+  P   TY  L+DGL K  RL EA  L + M   GC 
Sbjct: 866  GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCR 925

Query: 260  PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
            P    +N+LING  K GE   A  L   M  +G  P+  TY+ L+  LC+ G +D+ +  
Sbjct: 926  PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 985

Query: 320  LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE-RKFHVNEYIYSTLISGLF 378
               +  S   P+ V Y  IINGL K  R  +   +   M++ R    + Y Y++LI  L 
Sbjct: 986  FRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLG 1045

Query: 379  KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
              G  E+A K++ ++   G +PN   ++ALI G    GKP+ A  +   M+  G + N  
Sbjct: 1046 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1105

Query: 439  TYSSL 443
            TY  L
Sbjct: 1106 TYEQL 1110



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 210/480 (43%), Gaps = 18/480 (3%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +T T+  + K +   G +  A    R+M       + Y+Y  L+  L K     EA+ + 
Sbjct: 154 DTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 213

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
             M +DG  P+  T++ L+ GL K  ++     L+  M   G  PN  T+   I  L   
Sbjct: 214 RRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRA 273

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEERKFHVNEYI 369
           G +++A  +L RM    C P+ VTY  +I+ L    R +D A+ V   M+  +   +   
Sbjct: 274 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCT-ARKLDCAKEVFAKMKTGRHKPDRVT 332

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y TL+         +   + W +M + G  P+ V ++ L+D LC+ G   EA   L  M 
Sbjct: 333 YITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMR 392

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   N  TY++L+ G     +   A+EI+ +M           Y V I    + G   
Sbjct: 393 DQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSV 452

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A   + +M ++G  P++VA ++ ++ L  AG   EA ++F  +   +    PD  TYN+
Sbjct: 453 SALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL--KDIGLVPDSVTYNM 510

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL------ 603
           ++    K   I  +I LL+ M++  C+PD++  N  +  L +     +    F+      
Sbjct: 511 MMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 570

Query: 604 --------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                   N L   L K  +     ++ E M+QK   P T T+  +   LC+   +  A+
Sbjct: 571 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 630



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 5/212 (2%)

Query: 130  KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
            K+  + EA +LF  M D + C+     +N ++N   + G    A   +  +V      + 
Sbjct: 905  KSGRLYEAKQLFEGMSD-YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE---GVR 960

Query: 190  PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
            P+  T+++++  +C +G VD  +  FRE+      PD+  Y  +++GL K +RL+EA++L
Sbjct: 961  PDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVL 1020

Query: 250  LDEMQVD-GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
             +EM+   G  P   T+N LI  L   G +  A K+ + +   G  PN  T+N LI G  
Sbjct: 1021 FNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1080

Query: 309  LKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
            L G  + A ++   MV     PN  TY  + N
Sbjct: 1081 LSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112


>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g03560, mitochondrial; Flags: Precursor
 gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
 gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 238/490 (48%), Gaps = 8/490 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SL+   A + D   +  V   +++ +  +   +   + K++GK  +VEE + ++  M 
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKM- 213

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E   + T+ ++N ++N ++       A   +  + + +   I P+ +T+N +IK  C+ 
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR---IKPDIVTYNTMIKGYCKA 270

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G    A++  R+M  R  E D  TY T++     ++     V L  EM   G    P  F
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           +++I GLCK G+L     + +NM  KG  PN   Y  LI G    G+++ A+ LL RM+ 
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               P+ VTY  ++NGL K GR  +      +       +N   YS+LI GL K G+ ++
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-INNGCAANAFTYSSLM 444
           A +L+++M EKGC  ++  Y+ALID   +  K DEA  +   M    GC    +TY+ L+
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 510

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G F+  +  +A+++W  M          C+  L  GLC  GK+  A  +  ++   G  
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D  A   MI+ LC AG ++EA KL + +   E   +       +++NAL K      ++
Sbjct: 571 LD-AACEDMINTLCKAGRIKEACKLADGI--TERGREVPGRIRTVMINALRKVGKADLAM 627

Query: 565 DLLNSMMDRG 574
            L++S +  G
Sbjct: 628 KLMHSKIGIG 637



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 188/378 (49%), Gaps = 7/378 (1%)

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           K V R+  V + I+ F E P+      +     L+    K   ++E + +  +M+ +G  
Sbjct: 166 KDVDRIRFVSSEIKKF-EFPM-----TVSAANALIKSFGKLGMVEELLWVWRKMKENGIE 219

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           PT  T+N L+NGL     +  A ++ + M      P+ VTYNT+I G C  G   KA+  
Sbjct: 220 PTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 279

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  M       +++TY T+I              +   M+E+   V  + +S +I GL K
Sbjct: 280 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 339

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           EGK  +   +++ M+ KG KPN  +Y+ LIDG  + G  ++A  +L  MI+ G   +  T
Sbjct: 340 EGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVT 399

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YS ++ G  ++G+  +A++ +     +    N + YS LI GL + G++ EA  ++ +M 
Sbjct: 400 YSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS 459

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            +GC  D   Y+++I        V+EA+ LF  M   E   Q  V+TY ILL+ + K+  
Sbjct: 460 EKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT-VYTYTILLSGMFKEHR 518

Query: 560 ISHSIDLLNSMMDRGCDP 577
              ++ L + M+D+G  P
Sbjct: 519 NEEALKLWDMMIDKGITP 536



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 197/430 (45%), Gaps = 32/430 (7%)

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN-GELGRAAKLV--- 285
           Y +L+D L     +D    +  E++    F  P+T +   N L K+ G+LG   +L+   
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKK---FEFPMTVSA-ANALIKSFGKLGMVEELLWVW 210

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M   G  P   TYN L++GL     +D A  + + M + +  P+ VTY T+I G  K 
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 270

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           G+       L  ME R    ++  Y T+I   + +      + L+++M EKG +     +
Sbjct: 271 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 330

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           S +I GLC+ GK +E   +   MI  G   N   Y+ L+ G+ +SG    A+ +   M  
Sbjct: 331 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 390

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                + V YSV+++GLC++G++ EA   +      G   + + YSS+I GL  AG V+E
Sbjct: 391 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 450

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR-GCDPDLVTCNI 584
           A +LF EM   E     D + YN L++A  K   +  +I L   M +  GCD  + T  I
Sbjct: 451 AERLFEEMS--EKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTI 508

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            L+ +                     FK  R     K+ ++M+ K ++P  + +  +   
Sbjct: 509 LLSGM---------------------FKEHRNEEALKLWDMMIDKGITPTAACFRALSTG 547

Query: 645 LCRPKRIQAA 654
           LC   ++  A
Sbjct: 548 LCLSGKVARA 557



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 160/330 (48%), Gaps = 19/330 (5%)

Query: 342 LVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           ++ L + VD  R + S +++ +F +     + LI    K G  E+ + +W++M E G +P
Sbjct: 161 VLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEP 220

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGFFESGKGHKAVEI 459
               Y+ L++GL      D AE + FE++ +G    +  TY++++KG+ ++G+  KA+E 
Sbjct: 221 TLYTYNFLMNGLVSAMFVDSAERV-FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 279

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            +DM       +++ Y  +I     D        ++ +M  +G +    A+S +I GLC 
Sbjct: 280 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 339

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G + E   +F  M+     S+P+V  Y +L++   K  ++  +I LL+ M+D G  PD+
Sbjct: 340 EGKLNEGYTVFENMI--RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV 397

Query: 580 VTCNIFLTAL------KEKLEAPQ----DG----TDFLNELAIRLFKRQRTSGGFKIVEV 625
           VT ++ +  L      +E L+       DG    + F + L   L K  R     ++ E 
Sbjct: 398 VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 457

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           M +K  +  +  +  ++    + +++  AI
Sbjct: 458 MSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 201/408 (49%), Gaps = 25/408 (6%)

Query: 182 NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKEN 241
           +A    + P+  TFN VI  +CR+G +  A  + +++      P + TY +L+DG CK+ 
Sbjct: 181 SALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKG 240

Query: 242 ---RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
               +    +LL EM   G  PT VTF VLING CKN     A ++ + M  +G   + V
Sbjct: 241 GAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVV 300

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TYN+LI GLC +G +++ V L++ M      PNE+T+G ++ G  K G   D    +  M
Sbjct: 301 TYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGM 360

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            ER    +  IY+ LI    + GK EDAM + + M +KG  PN   Y+ LI G  R G  
Sbjct: 361 TERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDW 420

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
             A  +L EM   G  A+  TY+ L+      G+  KAV++  +M++     N + Y+ +
Sbjct: 421 RSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTI 480

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--CL 536
           I G C+ G ++ A  + T+M     + +VV Y+  I   C  G ++EA  L NEML  CL
Sbjct: 481 IQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCL 540

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
            P       TY  +                   MM++G  PD+  C +
Sbjct: 541 VPNG----ITYETIKEG----------------MMEKGYTPDIRGCTV 568



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 210/421 (49%), Gaps = 5/421 (1%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +    H    P+T + N ++  +     VD A + FR    R   PDIYT+ T++ GLC+
Sbjct: 144 LAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCR 203

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG---RAAKLVDNMFLKGCLPN 296
             +L +A  +  +++  G  P+  T+N LI+G CK G  G       L+  M   G  P 
Sbjct: 204 IGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPT 263

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VT+  LI+G C   N   AV + + M       + VTY ++I+GL   G+  +G +++ 
Sbjct: 264 AVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLME 323

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            ME+     NE  +  ++ G  K+G   DA      M E+  +P+ V+Y+ LID   R+G
Sbjct: 324 EMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLG 383

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           K ++A  +   M   G + N  TY+ L+ GF  SG    A  +  +M +     + V Y+
Sbjct: 384 KMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYN 443

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           VLI  LC  G++R+A  +  +M   G +P+ + Y+++I G C+ G+++ A ++   M   
Sbjct: 444 VLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM--E 501

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
           + + + +V TYN+ +   C+   +  + DLLN M+D+   P+ +T       + EK   P
Sbjct: 502 KCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTP 561

Query: 597 Q 597
            
Sbjct: 562 D 562



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 170/395 (43%), Gaps = 55/395 (13%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P+  + N L+ GL     +  A K   +   +   P+  T+NT+I GLC  G L KA  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              + A    P+  TY ++I+G  K G A +            +HV+             
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGN-----------MYHVD------------- 249

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
                    L K+M+E G  P  V +  LI+G C+      A  +  EM   G AA+  T
Sbjct: 250 --------MLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+SL+ G    GK  + V++ ++M       NE+ +  ++ G C+ G + +A      M 
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            R  +PDVV Y+ +I      G +E+A+ +   M   +    P+V TYN L+    +  +
Sbjct: 362 ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMA--KKGISPNVTTYNCLITGFSRSGD 419

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
              +  LL+ M ++G + D+VT N+ + AL  K E  +                      
Sbjct: 420 WRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRK---------------------A 458

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            K+++ M +  L P   T+  ++Q  C    I++A
Sbjct: 459 VKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSA 493


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 141/514 (27%), Positives = 258/514 (50%), Gaps = 32/514 (6%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           DST+  +I    ++   +   ++   M++   V    ++  +  ++ KA L+++A   F 
Sbjct: 453 DSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFD 512

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M+ + +C   V ++ S+++  ++      A + +  ++        PN +T+  +I   
Sbjct: 513 EMLRD-NCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSK---PNVVTYTALIDGH 568

Query: 203 CRLGLVDNAIQLFREMPV---------------RNCE-PDIYTYCTLMDGLCKENRLDEA 246
           C+ G +D A Q++  M                  +CE P+I TY  L+DGLCK NR++EA
Sbjct: 569 CKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEA 628

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             LLD M V+GC P  + ++ LI+G CK G+L  A ++   M  +G  PN  TY++LI+ 
Sbjct: 629 HELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINS 688

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           L  +  LD  + +L +M+ + C PN V Y  +I+GL K+G+  +  R+++ MEE   + N
Sbjct: 689 LFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPN 748

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+ +I G  K GK E  ++L++ M  KGC PN + Y  LI+  C  G  DEA  +L 
Sbjct: 749 VITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLD 808

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM       +  +Y  +++GF  + +   ++ +  ++++N  V  E  Y +LI    + G
Sbjct: 809 EMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFIKAG 866

Query: 487 KLREARMVWTQMLSRGCKPDVVA-----YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           +L  A  +  ++ S    P +       Y+S+I  L +A  V++A +L+  M  +     
Sbjct: 867 RLEGALNLLEEISS---SPSLAVANKYLYTSLIESLSHASKVDKAFELYASM--INKNVV 921

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           P++ T+  L+  L +      ++ L +S+    C
Sbjct: 922 PELSTFVHLIKGLTRVGKWQEALQLSDSICQMVC 955



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/585 (24%), Positives = 270/585 (46%), Gaps = 45/585 (7%)

Query: 106 LYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVII 165
           L ++R + R +L K   F+ +   +  +   A+     + D F  K +  ++N+++ V +
Sbjct: 158 LMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGRLKD-FGYKASPTTYNALIQVFL 216

Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP 225
           +      A   +  + N+       +  T      ++C+ G   +A+ L  +       P
Sbjct: 217 RADKLDTAFLVHREMSNS---GFRMDGCTLGCFAYSLCKAGRCGDALSLLEK---EEFVP 270

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D   Y  ++ GLC+ +   EA+ +LD M+   C P  VT+ +L++G    G+LGR  +++
Sbjct: 271 DTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRIL 330

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M  +GC PN   +N+L+H  C   +   A  L  +M+   C P  + Y   I G +  
Sbjct: 331 SMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFI-GSICS 389

Query: 346 GRAVDGARVLMSMEERKFH--------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
              + G+  L+ + E+ +         +N+   S     L   GK + A ++  +MM KG
Sbjct: 390 NEELPGSD-LLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKG 448

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P+   YS +I  LC   K ++A  +  EM  NG   + +TY+ L+  F ++G   +A 
Sbjct: 449 FVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQAR 508

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
             + +M ++NC  N V Y+ LIH   +  K+ +A  ++  ML  G KP+VV Y+++I G 
Sbjct: 509 NWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGH 568

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQ--------------PDVFTYNILLNALCKQSNISHS 563
           C AG +++A +++  M      S               P++ TY  L++ LCK + +  +
Sbjct: 569 CKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEA 628

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNE------------LAIR 609
            +LL++M   GC+P+ +  +  +       KLE  Q+    ++E            L   
Sbjct: 629 HELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINS 688

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           LFK +R     K++  ML+   +P    +  ++  LC+  + + A
Sbjct: 689 LFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEA 733



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 157/617 (25%), Positives = 274/617 (44%), Gaps = 57/617 (9%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF-IFIFKAYGKAHLVEEAIRL 140
           D+ FY+ ++     +  F+    +L RMR    +    ++ I +    GK  L     R+
Sbjct: 271 DTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQL-GRCKRI 329

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
              M+ E  C    + FNS+++   +   Y  A + +  ++        P  L +N+ I 
Sbjct: 330 LSMMMTE-GCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKC---GCQPGYLLYNIFIG 385

Query: 201 TVCR------LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           ++C         L++ A + + EM       +          LC   + D+A  ++ EM 
Sbjct: 386 SICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMM 445

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G  P   T++ +I  LC   ++ +A  L + M   G +P+  TY  LI   C  G + 
Sbjct: 446 SKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQ 505

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A +  D M+   C PN VTY ++I+  +K  +  D  ++   M       N   Y+ LI
Sbjct: 506 QARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALI 565

Query: 375 SGLFKEGKAEDAMKLWKQMM---------------EKGCK-PNTVVYSALIDGLCRVGKP 418
            G  K G+ + A +++ +M                +  C+ PN + Y AL+DGLC+  + 
Sbjct: 566 DGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRV 625

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           +EA E+L  M  NGC  N   Y +L+ GF ++GK   A E++  M++     N   YS L
Sbjct: 626 EEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSL 685

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           I+ L ++ +L     V ++ML   C P+VV Y+ MI GLC  G  EEA +L  +M   E 
Sbjct: 686 INSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKME--EV 743

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL-----TALKEKL 593
              P+V TY  +++   K   I   ++L   M  +GC P+ +T  + +     T L +  
Sbjct: 744 GCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLD-- 801

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS--------------PQTSTWE 639
               +    L+E+    + R  +S   KI+E   ++F++              P  S + 
Sbjct: 802 ----EAHRLLDEMKQTYWPRHISSYR-KIIEGFNREFITSIGLLDELSENESVPVESLYR 856

Query: 640 RVVQELCRPKRIQAAIN 656
            ++    +  R++ A+N
Sbjct: 857 ILIDNFIKAGRLEGALN 873



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/474 (24%), Positives = 180/474 (37%), Gaps = 108/474 (22%)

Query: 261 TPVTFNVLINGLCKNG-------------------ELGRAAKLVDNMFLKGCL------- 294
           TPV +N LI  LC N                    EL R  KL++ +  K C        
Sbjct: 132 TPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLR--KLLNFLIQKCCRNGMWNVA 189

Query: 295 -------------PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
                         +  TYN LI        LD A  +   M  S    +  T G     
Sbjct: 190 LEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYS 249

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L K GR  D   +L   E+ +F  +   Y+ ++SGL +    ++AM +  +M    C PN
Sbjct: 250 LCKAGRCGDALSLL---EKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPN 306

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
            V Y  L+ G    G+    + IL  M+  GC  N   ++SL+  + +S     A +++K
Sbjct: 307 VVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFK 366

Query: 462 DMAKNNCVYNEVCYSVLIHGLCED------------------------------------ 485
            M K  C    + Y++ I  +C +                                    
Sbjct: 367 KMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFAR 426

Query: 486 -----GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
                GK  +A  +  +M+S+G  PD   YS +I  LC+A  VE+A  LF EM   +   
Sbjct: 427 CLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEM--KKNGI 484

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P V+TY IL+++ CK   I  + +  + M+   C P++VT    + A            
Sbjct: 485 VPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHA------------ 532

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                      K ++     K+ E+ML +   P   T+  ++   C+  +I  A
Sbjct: 533 ---------YLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKA 577


>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
          Length = 642

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 238/490 (48%), Gaps = 8/490 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SL+   A + D   +  V   +++ +  +   +   + K++GK  +VEE + ++  M 
Sbjct: 137 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKM- 195

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E   + T+ ++N ++N ++       A   +  + + +   I P+ +T+N +IK  C+ 
Sbjct: 196 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR---IKPDIVTYNTMIKGYCKA 252

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G    A++  R+M  R  E D  TY T++     ++     V L  EM   G    P  F
Sbjct: 253 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 312

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           +++I GLCK G+L     + +NM  KG  PN   Y  LI G    G+++ A+ LL RM+ 
Sbjct: 313 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 372

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               P+ VTY  ++NGL K GR  +      +       +N   YS+LI GL K G+ ++
Sbjct: 373 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 432

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-INNGCAANAFTYSSLM 444
           A +L+++M EKGC  ++  Y+ALID   +  K DEA  +   M    GC    +TY+ L+
Sbjct: 433 AERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILL 492

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G F+  +  +A+++W  M          C+  L  GLC  GK+  A  +  ++   G  
Sbjct: 493 SGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 552

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D  A   MI+ LC AG ++EA KL + +   E   +       +++NAL K      ++
Sbjct: 553 LD-AACEDMINTLCKAGRIKEACKLADGI--TERGREVPGRIRTVMINALRKVGKADLAM 609

Query: 565 DLLNSMMDRG 574
            L++S +  G
Sbjct: 610 KLMHSKIGIG 619



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 188/378 (49%), Gaps = 7/378 (1%)

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           K V R+  V + I+ F E P+      +     L+    K   ++E + +  +M+ +G  
Sbjct: 148 KDVDRIRFVSSEIKKF-EFPMT-----VSAANALIKSFGKLGMVEELLWVWRKMKENGIE 201

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           PT  T+N L+NGL     +  A ++ + M      P+ VTYNT+I G C  G   KA+  
Sbjct: 202 PTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 261

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  M       +++TY T+I              +   M+E+   V  + +S +I GL K
Sbjct: 262 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 321

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           EGK  +   +++ M+ KG KPN  +Y+ LIDG  + G  ++A  +L  MI+ G   +  T
Sbjct: 322 EGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVT 381

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YS ++ G  ++G+  +A++ +     +    N + YS LI GL + G++ EA  ++ +M 
Sbjct: 382 YSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMS 441

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            +GC  D   Y+++I        V+EA+ LF  M   E   Q  V+TY ILL+ + K+  
Sbjct: 442 EKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQT-VYTYTILLSGMFKEHR 500

Query: 560 ISHSIDLLNSMMDRGCDP 577
              ++ L + M+D+G  P
Sbjct: 501 NEEALKLWDMMIDKGITP 518



 Score =  162 bits (409), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 197/430 (45%), Gaps = 32/430 (7%)

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN-GELGRAAKLV--- 285
           Y +L+D L     +D    +  E++    F  P+T +   N L K+ G+LG   +L+   
Sbjct: 137 YVSLVDVLALAKDVDRIRFVSSEIKK---FEFPMTVSA-ANALIKSFGKLGMVEELLWVW 192

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
             M   G  P   TYN L++GL     +D A  + + M + +  P+ VTY T+I G  K 
Sbjct: 193 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKA 252

Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
           G+       L  ME R    ++  Y T+I   + +      + L+++M EKG +     +
Sbjct: 253 GQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAF 312

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           S +I GLC+ GK +E   +   MI  G   N   Y+ L+ G+ +SG    A+ +   M  
Sbjct: 313 SLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMID 372

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                + V YSV+++GLC++G++ EA   +      G   + + YSS+I GL  AG V+E
Sbjct: 373 EGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDE 432

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR-GCDPDLVTCNI 584
           A +LF EM   E     D + YN L++A  K   +  +I L   M +  GCD  + T  I
Sbjct: 433 AERLFEEMS--EKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTI 490

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
            L+ +                     FK  R     K+ ++M+ K ++P  + +  +   
Sbjct: 491 LLSGM---------------------FKEHRNEEALKLWDMMIDKGITPTAACFRALSTG 529

Query: 645 LCRPKRIQAA 654
           LC   ++  A
Sbjct: 530 LCLSGKVARA 539



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 160/330 (48%), Gaps = 19/330 (5%)

Query: 342 LVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           ++ L + VD  R + S +++ +F +     + LI    K G  E+ + +W++M E G +P
Sbjct: 143 VLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEP 202

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGFFESGKGHKAVEI 459
               Y+ L++GL      D AE + FE++ +G    +  TY++++KG+ ++G+  KA+E 
Sbjct: 203 TLYTYNFLMNGLVSAMFVDSAERV-FEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEK 261

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            +DM       +++ Y  +I     D        ++ +M  +G +    A+S +I GLC 
Sbjct: 262 LRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCK 321

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
            G + E   +F  M+     S+P+V  Y +L++   K  ++  +I LL+ M+D G  PD+
Sbjct: 322 EGKLNEGYTVFENMI--RKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDV 379

Query: 580 VTCNIFLTAL------KEKLEAPQ----DG----TDFLNELAIRLFKRQRTSGGFKIVEV 625
           VT ++ +  L      +E L+       DG    + F + L   L K  R     ++ E 
Sbjct: 380 VTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEE 439

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           M +K  +  +  +  ++    + +++  AI
Sbjct: 440 MSEKGCTRDSYCYNALIDAFTKHRKVDEAI 469


>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
 gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
          Length = 798

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 150/559 (26%), Positives = 253/559 (45%), Gaps = 78/559 (13%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           ++ IF   + G+ H   EA+  F  M  EF C+ T   +N+VL V++  G          
Sbjct: 141 EALIFAHASAGRHH---EAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASG---------- 187

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
                                      G+V  A+ L+  M    C P+  TY  LMDGLC
Sbjct: 188 ---------------------------GVVPLALALYNRMVAAGCLPNRATYNVLMDGLC 220

Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
           K     +A+ L DEM   G  P   T  +L++ +C  G+L  A  L+++M  KGC P+EV
Sbjct: 221 KRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEV 280

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT-YGTIINGLVKLGRAVDGARVLMS 357
           TYN  + GLC  G +D+A+  L+ +  +      +  Y  +I+GL   GR  +G +  M 
Sbjct: 281 TYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYME 340

Query: 358 -MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
            +E+  F  +  +Y+ +I G  + G+ +DA   + +M EK   P+T  Y+ L+  LC  G
Sbjct: 341 VLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKALCDSG 400

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
             D A  ++ EM  N    +  T++ ++ G  +     +A++++  M +  C    + Y+
Sbjct: 401 DLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYN 460

Query: 477 VLIHGLCEDGKLREARMVWTQM-----------LSRGCK--PDVVAYSSMIHGLCNAGSV 523
           VLI GL    +L EARM++ +M           L+ G     D  +   ++  +C +G V
Sbjct: 461 VLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQV 520

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
            +A KL   +  ++    PDV TYN LLN LCK  N+  ++ L   +  +G   D +T  
Sbjct: 521 LKAYKLLRGI--MDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYG 578

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
             + +                     L +  R +    + + +L    +P  S +  +++
Sbjct: 579 TLIDS---------------------LLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMR 617

Query: 644 ELCRPKRIQAAINKCWSNL 662
            LCR  ++  AIN  + +L
Sbjct: 618 SLCRMNKLSQAINFWFDHL 636



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/361 (25%), Positives = 159/361 (44%), Gaps = 22/361 (6%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +L++   +SGD      ++  M +   V+   +   +     K  LV+EA+++F  MV
Sbjct: 389 YNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMV 448

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLY--HRALE----FYNHIVNAKHMNILPNTLTFNLV- 198
            E  C  TV ++N     ++ +GLY  HR  E    FY   V       L  TL  N V 
Sbjct: 449 -EVGCHPTVMTYN-----VLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVK 502

Query: 199 --------IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
                   + ++C+ G V  A +L R +      PD+ TY TL++GLCK   LD A+ L 
Sbjct: 503 DSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNLDGALRLF 562

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            E+QV G     +T+  LI+ L +      A  L  ++   G  P+   YN+++  LC  
Sbjct: 563 RELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILHIGGTPSLSIYNSIMRSLCRM 622

Query: 311 GNLDKAVSL-LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             L +A++   D ++    +  +           + G   +  R L+ +++    VN   
Sbjct: 623 NKLSQAINFWFDHLLKKYNLSAQDEVIASARKKFEEGSLDEAVRELIKIDQEYGSVNSCP 682

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+  + GL +  + +DA+K++  + E G        + L   LC     D A +++   +
Sbjct: 683 YTIWLIGLIQARRIDDALKIFHILEESGIDITPACCAHLSKYLCWEKNLDSAVDVMLYTL 742

Query: 430 N 430
           N
Sbjct: 743 N 743


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 225/437 (51%), Gaps = 6/437 (1%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           AL  +NH+VN    N LP+ + F  +   + R+      + L ++M +     D+ +   
Sbjct: 75  ALSAFNHMVNT---NPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L++  C+   +D    +L ++   G  P  +TF+ LING C  G++GRA +L D M  +G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN  +Y+ +I GLC  G   + + LL+ M    C P+ V Y TI++ L K     +  
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M+          Y++LI GL   G+ ++A  L  +M      P+ V +S LID +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C+ G+  EA  IL  M   G   +  TY++LM G+    +  +A ++++ M     + + 
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             +S+L++G C+  ++ EA+ ++ +M  RG  PD V+Y+++I GLC A    EA +LF +
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           M        P++ TY+ILL+ L KQ  +  ++ L  +M + G  PDLVT NI +  +  K
Sbjct: 432 MH--SNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMC-K 488

Query: 593 LEAPQDGTDFLNELAIR 609
               +D  +   EL+++
Sbjct: 489 YGKFKDARELFAELSVK 505



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 207/389 (53%), Gaps = 4/389 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +TF+ +I   C  G +  AI+LF  M  R  +P++++Y  ++ GLC+  +  E + L
Sbjct: 159 PNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKL 218

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+ M+V GC P  V +N +++ LCK+  +  A  +   M   G LP  VTY +LIHGL  
Sbjct: 219 LEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRN 278

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G   +A  LL+ M     MP+ V +  +I+ + K G   +   +L +M E     +   
Sbjct: 279 LGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVAT 338

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TL++G     +  +A K+++ M+ KG  P+   +S L++G C+  + DEA+++  EM 
Sbjct: 339 YNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMT 398

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   +  +Y++L+ G  ++ +  +A E++KDM  N    N V YS+L+  L + G L 
Sbjct: 399 HRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLD 458

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYN 548
           +A  ++  M + G KPD+V Y+ MI G+C  G  ++A +LF E   L  K  QP+ +   
Sbjct: 459 QAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAE---LSVKGLQPNNWVCT 515

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDP 577
             ++ +CK   +  +      M    C P
Sbjct: 516 PTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 232/450 (51%), Gaps = 6/450 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + +A+  F+ MV+       VK F  + + +++   Y   +     +  A    I  + L
Sbjct: 72  INDALSAFNHMVNTNPLPSIVK-FGELFSALVRMKHYKTVVSLSKQMEMA---GISHDVL 127

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           +  ++I   CRL  VD    +  ++     EP++ T+ TL++G C E ++  A+ L D M
Sbjct: 128 SLTILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVM 187

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P   +++++I GLC+ G+     KL+++M + GC P+ V YNT++  LC    +
Sbjct: 188 VARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLV 247

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           ++AV +  +M  +  +P  VTY ++I+GL  LGR  +   +L  M+      +   +S L
Sbjct: 248 NEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVL 307

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I  + KEG+  +A  + K M E G +P+   Y+ L++G C   +  EA ++   MI+ G 
Sbjct: 308 IDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR 367

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             + F++S L+ G+ ++ +  +A +++ +M     + + V Y+ LI GLC+  +  EA  
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEE 427

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  M S G  P++V YS ++  L   G +++A+ LF  M       +PD+ TYNI+++ 
Sbjct: 428 LFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAM--ENSGLKPDLVTYNIMIDG 485

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           +CK      + +L   +  +G  P+   C 
Sbjct: 486 MCKYGKFKDARELFAELSVKGLQPNNWVCT 515



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 187/361 (51%), Gaps = 11/361 (3%)

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           +++A+   + M      P+ V F  L + L +         L   M + G   + ++   
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV---KLGRAVDGARVLMSME 359
           LI+  C   ++D   S+L +++     PN +T+ T+ING     K+GRA++   V+++  
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA-- 189

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            R +  N + YS +I GL + GK  + +KL + M   GC+P+ V+Y+ ++D LC+    +
Sbjct: 190 -RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVN 248

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           EA  I  +M   G      TY+SL+ G    G+  +A  +  +M   N + + V +SVLI
Sbjct: 249 EAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI 308

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
             +C++G++ EAR++   M   G +PDV  Y+++++G C    V EA K+F  M+     
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMI--SKG 366

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KEKLEAP 596
             PDVF+++IL+N  CK   I  +  L + M  RG  PD V+ N  ++ L   +  LEA 
Sbjct: 367 RMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAE 426

Query: 597 Q 597
           +
Sbjct: 427 E 427



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 192/391 (49%), Gaps = 6/391 (1%)

Query: 85  TFYSLIQHYANSGDF-KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           TF +LI  +   G   +++E+    + R  +  +  S+  I K   +     E I+L   
Sbjct: 163 TFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVH-SYSIIIKGLCRVGKTTEVIKLLEH 221

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M     C+  V  +N++++ + ++ L + A+  +      K   ILP  +T+  +I  + 
Sbjct: 222 M-KVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIF---CKMKGTGILPTVVTYTSLIHGLR 277

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
            LG    A  L  EM   N  PD+  +  L+D +CKE  + EA ++L  M   G  P   
Sbjct: 278 NLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVA 337

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+N L+NG C   E+  A K+ + M  KG +P+  +++ L++G C    +D+A  L D M
Sbjct: 338 TYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEM 397

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                +P+ V+Y T+I+GL +  R ++   +   M    +  N   YS L+  L K+G  
Sbjct: 398 THRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYL 457

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + AM L++ M   G KP+ V Y+ +IDG+C+ GK  +A E+  E+   G   N +  +  
Sbjct: 458 DQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPT 517

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           + G  + G   +A + ++ M K++C   + C
Sbjct: 518 IDGVCKGGLLDEAHKAFRQMEKDDCSPAQGC 548



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 163/343 (47%), Gaps = 23/343 (6%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           N++ A+S  + MV +  +P+ V +G + + LV++        +   ME      +    +
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLT 130

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI+   +    +    +  ++++ G +PN + +S LI+G C  GK   A E+   M+  
Sbjct: 131 ILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR 190

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  +YS ++KG    GK  + +++ + M    C  + V Y+ ++  LC+D  + EA
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++ +M   G  P VV Y+S+IHGL N G  +EA  L NEM        PD+  +++L+
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMK--GGNIMPDLVAFSVLI 308

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           + +CK+  +S +  +L +M + G +PD+ T N  +     ++E  +              
Sbjct: 309 DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVE-------------- 354

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    K+ EVM+ K   P   ++  +V   C+ KRI  A
Sbjct: 355 -------ARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEA 390



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 99/218 (45%), Gaps = 4/218 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+ +L+  Y    +      V   M  + R+    SF  +   Y KA  ++EA +LF  
Sbjct: 337 ATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDE 396

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M        TV S+N++++ + Q     R LE      +       PN +T+++++  + 
Sbjct: 397 MTHRGLIPDTV-SYNTLISGLCQA---RRPLEAEELFKDMHSNGYPPNLVTYSILLDCLS 452

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           + G +D A+ LFR M     +PD+ TY  ++DG+CK  +  +A  L  E+ V G  P   
Sbjct: 453 KQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNW 512

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
                I+G+CK G L  A K    M    C P +   N
Sbjct: 513 VCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 241/477 (50%), Gaps = 13/477 (2%)

Query: 103 EMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN 162
           E+VL   R E +  +   F  + +   +  +V+EAI  F+ M ++    +T ++ N +L 
Sbjct: 142 ELVLAHDRLETKSTI--LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKT-ETCNHILT 198

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
           ++ +      A  FY    +   M I  N  TFN++I  +C+ G +  A      M V  
Sbjct: 199 LLSRLNRIENAWVFY---ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFG 255

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
            +P I TY TL+ G     R++ A L++ EM+  G  P   T+N +++ +C  G   RA+
Sbjct: 256 IKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RAS 312

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +++  M   G +P+ V+YN LI G    G+L+ A +  D MV    +P   TY T+I+GL
Sbjct: 313 EVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGL 372

Query: 343 VKLGRAVDGARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
             +   ++ A +L+  + E+   ++   Y+ LI+G  + G A+ A  L  +MM  G +P 
Sbjct: 373 F-MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
              Y++LI  LCR  K  EA+E+  +++  G   +    ++LM G    G   +A  + K
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLK 491

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           +M   +   ++V Y+ L+ GLC +GK  EAR +  +M  RG KPD ++Y+++I G    G
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
             + A  + +EML L     P + TYN LL  L K      + +LL  M   G  P+
Sbjct: 552 DTKHAFMVRDEMLSL--GFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPN 606



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 203/402 (50%), Gaps = 5/402 (1%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           +T+ F+L+++  C+L +VD AI+ F  M  +   P   T   ++  L + NR++ A +  
Sbjct: 154 STILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFY 213

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            +M          TFN++IN LCK G+L +A   +  M + G  P  VTYNTL+ G  L+
Sbjct: 214 ADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLR 273

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G ++ A  ++  M +    P+  TY  I++ +   GRA   + VL  M+E     +   Y
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRA---SEVLREMKEIGLVPDSVSY 330

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + LI G    G  E A     +M+++G  P    Y+ LI GL    K + AE ++ E+  
Sbjct: 331 NILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIRE 390

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
            G   ++ TY+ L+ G+ + G   KA  +  +M  +     +  Y+ LI+ LC   K RE
Sbjct: 391 KGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTRE 450

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++ +++ +G KPD+V  ++++ G C  G+++ A  L  EM  +     PD  TYN L
Sbjct: 451 ADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM--SINPDDVTYNCL 508

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +  LC +     + +L+  M  RG  PD ++ N  ++   +K
Sbjct: 509 MRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKK 550



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 197/386 (51%), Gaps = 19/386 (4%)

Query: 111 REKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY 170
           +E ++   K F+ I + +G    ++  I  ++T+V  F  +  ++    +++ +  +G +
Sbjct: 237 KEGKLKKAKGFLGIMEVFG----IKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG-F 291

Query: 171 HRALEFYNHIVN--------------AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
              ++ YN I++               K + ++P+++++N++I+     G ++ A     
Sbjct: 292 QPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRD 351

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM  +   P  YTY TL+ GL  EN+++ A +L+ E++  G     VT+N+LING C++G
Sbjct: 352 EMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHG 411

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +  +A  L D M   G  P + TY +LI+ LC K    +A  L +++V     P+ V   
Sbjct: 412 DAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMN 471

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+++G   +G       +L  M+    + ++  Y+ L+ GL  EGK E+A +L  +M  +
Sbjct: 472 TLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G KP+ + Y+ LI G  + G    A  +  EM++ G      TY++L+KG  ++ +G  A
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELA 591

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGL 482
            E+ ++M     V N+  +  +I  +
Sbjct: 592 EELLREMKSEGIVPNDSSFCSVIEAM 617



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 129/262 (49%), Gaps = 6/262 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHT 143
           T+ +LI         ++ E +L R  REK +VL+  ++  +   Y +    ++A  L   
Sbjct: 364 TYNTLIHGLFMENKIEAAE-ILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDE 422

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M+ +   + T  ++ S++ V+ ++     A E +  +V  K M   P+ +  N ++   C
Sbjct: 423 MMTD-GIQPTQFTYTSLIYVLCRKNKTREADELFEKVV-GKGMK--PDLVMMNTLMDGHC 478

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
            +G +D A  L +EM + +  PD  TY  LM GLC E + +EA  L+ EM+  G  P  +
Sbjct: 479 AIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHI 538

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           ++N LI+G  K G+   A  + D M   G  P  +TYN L+ GL      + A  LL  M
Sbjct: 539 SYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598

Query: 324 VASKCMPNEVTYGTIINGLVKL 345
            +   +PN+ ++ ++I  +  L
Sbjct: 599 KSEGIVPNDSSFCSVIEAMSNL 620


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 220/445 (49%), Gaps = 43/445 (9%)

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           A H  + P+    N V++ +      D+   +  EM     EP I TY TL+D   KE R
Sbjct: 161 ASH-GVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGR 219

Query: 243 LDEAVLLLDEMQV--DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            D+  +LL EM+    GC P  VT+NV+I GL + G+L  AA+LV+ M L     +  TY
Sbjct: 220 KDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFTY 278

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSME 359
           N LI GL  +G + K   L   M     MP  VTY  +I+GL++ G  V+ A+V    M 
Sbjct: 279 NPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSG-LVEAAQVKFAEMR 337

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
                 +   Y++L++G  K G  ++A+ L+  +   G  P  + Y+  IDG CR+G  +
Sbjct: 338 AMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLE 397

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKG------------FFES----------------- 450
           EA  +  EM   GC  N  TY+ LMKG            FF+                  
Sbjct: 398 EARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRI 457

Query: 451 ------GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
                 G   +A+E+ + +       + V Y++LIHGLC+ G L++A+ +  +M+S G +
Sbjct: 458 CAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQ 517

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD + Y+ +IH  C  G + EA K+FN M  +     P   T+ ++++A C++ N+  + 
Sbjct: 518 PDCITYTCLIHAHCERGLLREARKIFNNM--ISDGLLPSAVTFTVIIHAYCRRGNLYSAY 575

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTAL 589
                M++ G +P+ +T N+ + AL
Sbjct: 576 GWFRKMLEEGVEPNEITYNVLIHAL 600



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 205/426 (48%), Gaps = 6/426 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N V+  + ++G    A E    +V    ++   ++ T+N +I  +   G V     L 
Sbjct: 243 TYNVVITGLTRKGDLEEAAE----LVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQ 298

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM      P + TY  ++ GL +   ++ A +   EM+  G  P  +T+N L+NG CK 
Sbjct: 299 LEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKA 358

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G L  A  L  ++   G  P  +TYN  I G C  G+L++A  L + M    C+PN  TY
Sbjct: 359 GNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTY 418

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             ++ G + +            M  +    + + Y+T I      G    A++L + +M 
Sbjct: 419 TILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLML 478

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +G   +TV Y+ LI GLC+ G   +A+E+  +M++NG   +  TY+ L+    E G   +
Sbjct: 479 EGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 538

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A +I+ +M  +  + + V ++V+IH  C  G L  A   + +ML  G +P+ + Y+ +IH
Sbjct: 539 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 598

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
            LC  G  + A   F+EM  LE     + +TY +L++  CK  N   ++     M   G 
Sbjct: 599 ALCRMGRTQLASHHFHEM--LERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 656

Query: 576 DPDLVT 581
            PD +T
Sbjct: 657 HPDYLT 662



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 215/459 (46%), Gaps = 19/459 (4%)

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           +  FREM      PD+     ++  L    R D+   + +EM   G  P+ VT+N L++ 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 272 LCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
             K G   + A L+  M  +G  CLPN+VTYN +I GL  KG+L++A  L++ M  SK  
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-K 272

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
            +  TY  +I GL+  G       + + ME          Y+ +I GL + G  E A   
Sbjct: 273 ASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + +M   G  P+ + Y++L++G C+ G   EA  +  ++   G A    TY+  + G+  
Sbjct: 333 FAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCR 392

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G   +A  + ++M +  C+ N   Y++L+ G      L  AR  + +MLS+G +PD  A
Sbjct: 393 LGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFA 452

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y++ I      G +  AL+L  E+L LE  S  D  TYNIL++ LCK  N+  + +L   
Sbjct: 453 YNTRICAELILGDIARALEL-REVLMLEGISS-DTVTYNILIHGLCKTGNLKDAKELQMK 510

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF--------------KRQR 615
           M+  G  PD +T    + A  E+    +    F N ++  L               +R  
Sbjct: 511 MVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGN 570

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
               +     ML++ + P   T+  ++  LCR  R Q A
Sbjct: 571 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLA 609



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 174/365 (47%), Gaps = 3/365 (0%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV ++N++++ ++Q GL   A   +  +   + M +LP+ +T+N ++   C+ G +  A+
Sbjct: 309 TVVTYNAMIHGLLQSGLVEAAQVKFAEM---RAMGLLPDVITYNSLLNGYCKAGNLKEAL 365

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            LF ++      P + TY   +DG C+   L+EA +L +EM   GC P   T+ +L+ G 
Sbjct: 366 LLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGS 425

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
                L  A +  D M  KG  P+   YNT I    + G++ +A+ L + ++      + 
Sbjct: 426 LNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDT 485

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY  +I+GL K G   D   + M M       +   Y+ LI    + G   +A K++  
Sbjct: 486 VTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNN 545

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+  G  P+ V ++ +I   CR G    A     +M+  G   N  TY+ L+      G+
Sbjct: 546 MISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGR 605

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A   + +M +   V N+  Y++LI G C+ G   +A   + +M   G  PD + + +
Sbjct: 606 TQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKA 665

Query: 513 MIHGL 517
           ++ G 
Sbjct: 666 LVKGF 670



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 157/340 (46%), Gaps = 40/340 (11%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++NS+LN   + G    AL  +  +  A    + P  LT+N+ I   CRLG ++ A  
Sbjct: 345 VITYNSLLNGYCKAGNLKEALLLFGDLRRA---GLAPTVLTYNIRIDGYCRLGDLEEARI 401

Query: 214 LFREMPVRNCEPDIYTYCTLMDG--------------------------------LCKE- 240
           L  EM  + C P++ TY  LM G                                +C E 
Sbjct: 402 LKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAEL 461

Query: 241 --NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
               +  A+ L + + ++G     VT+N+LI+GLCK G L  A +L   M   G  P+ +
Sbjct: 462 ILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCI 521

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY  LIH  C +G L +A  + + M++   +P+ VT+  II+   + G           M
Sbjct: 522 TYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKM 581

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            E     NE  Y+ LI  L + G+ + A   + +M+E+G   N   Y+ LIDG C+VG  
Sbjct: 582 LEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNW 641

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
           ++A    FEM  NG   +  T+ +L+KGF   G  H  +E
Sbjct: 642 EDAMRFYFEMHQNGIHPDYLTHKALVKGF--DGHVHHTIE 679


>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
 gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
          Length = 381

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/375 (33%), Positives = 202/375 (53%), Gaps = 8/375 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T+N++I  +CR G VD A +L   +P R C+P+   Y T++ GLC   R  +A  L
Sbjct: 14  PNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEEL 73

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LDEM  + C P   T NV++N L + G L +  + ++ M   GC  N VTYN +I G+C 
Sbjct: 74  LDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCE 133

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +G++D A+ LL  M +  C P+ VTY T++ GL    +  D   +++ M +     +   
Sbjct: 134 QGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVT 193

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++T+IS L ++G    A +++KQM EKGC PN+  YS +I GL + GK ++A E+L EM 
Sbjct: 194 FNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMA 253

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           + G   +   Y  L +   +  K  + V++   +  +      V ++ ++  LC +GK  
Sbjct: 254 SKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTD 312

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  V   M+S GC PD + Y  +I GL   G ++EA +L +  LC       DV + ++
Sbjct: 313 YAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSR-LC-----SRDVLSNSL 366

Query: 550 LLN-ALCKQSNISHS 563
           + N AL    NI  S
Sbjct: 367 IKNEALLLDQNIHSS 381



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 185/341 (54%), Gaps = 3/341 (0%)

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L+D M+ +GC P  VT+NV+I+ +C+ G++ +A +L++++  +GC PN V YNT++ GLC
Sbjct: 3   LIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLC 62

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
                  A  LLD MV   C PNE T   I+N L + G      R L  M +     N  
Sbjct: 63  SIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVV 122

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ +ISG+ ++G  + A++L   M   GCKP+ V Y+ L+ GLC   + ++AEE++ +M
Sbjct: 123 TYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKM 182

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
             N C  +  T+++++    + G   +A E++K M +  C  N   YS +I GL + GK+
Sbjct: 183 SQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKM 242

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A  +  +M S+G   D + Y  +   L     +EE +++ +++   +    P    +N
Sbjct: 243 EQALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKL--QDSGISPQTVLFN 299

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            +L  LC+     ++ID+L  M+  GC PD +T  I +  L
Sbjct: 300 TVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGL 340



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 187/363 (51%), Gaps = 5/363 (1%)

Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
           ++L   M    CEP++ TY  ++D +C+E  +D+A  LL+ +   GC P  V +N ++ G
Sbjct: 1   MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LC       A +L+D M  + C PNE T N +++ L  KG L K    L++M    C  N
Sbjct: 61  LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY  +I+G+ + G       +L +M+      +   Y+TL+ GL    + EDA +L  
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMI 180

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M +  C P+ V ++ +I  LC+ G   +A E+  +M   GC  N+ TYS+++ G  ++G
Sbjct: 181 KMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAG 240

Query: 452 KGHKAVEIWKDMAKNNCVYN-EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           K  +A+E+  +MA     YN +  Y +L   L ++ K+ E   V  ++   G  P  V +
Sbjct: 241 KMEQALELLNEMASKG--YNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLF 298

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           ++++  LC  G  + A+ +  +M+       PD  TY IL+  L  +  +  + +L++ +
Sbjct: 299 NTVLLVLCRNGKTDYAIDVLADMVSY--GCMPDELTYIILIEGLSYEGYLQEARELVSRL 356

Query: 571 MDR 573
             R
Sbjct: 357 CSR 359



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 185/358 (51%), Gaps = 10/358 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  I  A  +   V++A  L +++     CK    ++N+VL  +     +  A E  + 
Sbjct: 18  TYNVIIDAMCREGDVDQARELLNSLPSR-GCKPNTVNYNTVLKGLCSIERWVDAEELLDE 76

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V     N  PN  T N+++ T+ R GL+    +   +M    C  ++ TY  ++ G+C+
Sbjct: 77  MVRE---NCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCE 133

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           +  +D A+ LL  MQ  GC P  VT+N L+ GLC   +   A +L+  M    CLP+ VT
Sbjct: 134 QGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVT 193

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           +NT+I  LC KG + +A  +  +M    C PN  TY TII GL K G+      +L  M 
Sbjct: 194 FNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMA 253

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            + ++ ++ +Y  L   L KE K E+ +++  ++ + G  P TV+++ ++  LCR GK D
Sbjct: 254 SKGYNTDK-MYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTD 312

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI-----WKDMAKNNCVYNE 472
            A ++L +M++ GC  +  TY  L++G    G   +A E+      +D+  N+ + NE
Sbjct: 313 YAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVLSNSLIKNE 370



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/305 (29%), Positives = 156/305 (51%), Gaps = 17/305 (5%)

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N   Y+ +I  + +EG  + A +L   +  +GCKPNTV Y+ ++ GLC + +  +AEE+L
Sbjct: 15  NVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELL 74

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM+   C  N  T + ++      G   K     + M+K+ C  N V Y+ +I G+CE 
Sbjct: 75  DEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQ 134

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G +  A  + + M S GCKPD+V Y++++ GLC+A   E+A +L  +M   +    PD  
Sbjct: 135 GHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMS--QNDCLPDNV 192

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           T+N +++ LC++  I  + ++   M ++GC+P+  T +  +  L +  +  Q   + LNE
Sbjct: 193 TFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQ-ALELLNE 251

Query: 606 LAIR--------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           +A +              L K  +     ++V  +    +SPQT  +  V+  LCR  + 
Sbjct: 252 MASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKT 311

Query: 652 QAAIN 656
             AI+
Sbjct: 312 DYAID 316



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 133/269 (49%), Gaps = 23/269 (8%)

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           M+L   M  +GC+PN V Y+ +ID +CR G  D+A E+L  + + GC  N   Y++++KG
Sbjct: 1   MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
                +   A E+  +M + NC  NE   +V+++ L   G L++      +M   GC  +
Sbjct: 61  LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           VV Y+++I G+C  G V+ AL+L + M     K  PD+ TYN LL  LC       + +L
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQSFGCK--PDIVTYNTLLKGLCSADQWEDAEEL 178

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           +  M    C PD VT N  ++ L +K    Q                      F++ + M
Sbjct: 179 MIKMSQNDCLPDNVTFNTIISFLCQKGLILQ---------------------AFEVFKQM 217

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +K  +P ++T+  ++  L +  +++ A+
Sbjct: 218 PEKGCNPNSTTYSTIIGGLAKAGKMEQAL 246


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/483 (28%), Positives = 241/483 (49%), Gaps = 18/483 (3%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           SF  I +         +A+ +      +  C   V S+  +L  +  E     A++   H
Sbjct: 50  SFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLI-H 108

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++     +  PN +++  VI    +   V  A  LF EM  R   PD+ T  +++DGLCK
Sbjct: 109 MMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCK 168

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
              +D+A  +L +M      P   T+N L++G   +G+L  A +++  M   G  PN VT
Sbjct: 169 VQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVT 228

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y+ LI  LC  G   +A  +L+ M+ S+  PN  TYG +++G    G  V+   ++  M 
Sbjct: 229 YSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMV 288

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           +     + +I++  I    K G+ ++AM  + +M ++G  P+ + Y  +IDGLC++G+ D
Sbjct: 289 QNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLD 348

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
            A     +MI++G + +   +++L+ GF   GK  KA E++ +M         V ++ +I
Sbjct: 349 AAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMI 408

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LE 537
             L ++GK+ EA+ ++  M     KP+VV+Y+++IHG   AG ++E LKL ++ML   L+
Sbjct: 409 DKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLK 468

Query: 538 PKS---------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           P +               +PDV T N L+++ C+   I   + L   M+ +    D VT 
Sbjct: 469 PNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTE 528

Query: 583 NIF 585
           NI 
Sbjct: 529 NII 531



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 229/471 (48%), Gaps = 11/471 (2%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQL-FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           N ++F  +++T+C      +A+ +  R  P   C PD+++Y  L+ GLC E + +EAV L
Sbjct: 47  NAISFTPILRTLCAEKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDL 106

Query: 250 LDEMQVDG--CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           +  M  DG  C P  V++  +I+G  K  E+G+A  L   M  +G  P+ VT N++I GL
Sbjct: 107 IHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGL 166

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C    +DKA  +L +M     MP+  TY ++++G +  G+  +  R+L  M       N 
Sbjct: 167 CKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNG 226

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             YS LI  L K G   +A ++   M++    PN   Y  L+ G    G   E   ++  
Sbjct: 227 VTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDL 286

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M+ NG   +   ++  +  + + G+  +A+  +  M +   + + + Y  +I GLC+ G+
Sbjct: 287 MVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGR 346

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           L  A   + QM+  G  PD+V ++++IHG    G  E+A +LF EM+  +   +P V  +
Sbjct: 347 LDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMM--DRGIRPTVVVF 404

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNE 605
             +++ L K+  ++ +  L + M      P++V+ N  +    L  KL+      D  + 
Sbjct: 405 TTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLD--DM 462

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           L++ L     T     +++ ML   L P  +T   ++   C   RI+  + 
Sbjct: 463 LSVGLKPNAVTFN--TLLDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLT 511



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 167/333 (50%), Gaps = 5/333 (1%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           PT VT+ +LI+  C  G L  A   +  +   G   N +++  ++  LC +     A+++
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 320 LDRMVAS-KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV--NEYIYSTLISG 376
           + R      C P+  +Y  ++ GL    +  +   ++  M E   H   N   Y+T+I G
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
            FKE +   A  L+ +M+++G  P+ V  +++IDGLC+V   D+AEE+L +M +     +
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY+SL+ G+  SG+  +AV I K M+++    N V YS+LI  LC+ G   EAR +  
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILN 250

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M+     P+V  Y  ++HG    G + E   L + M  ++   +PD   +NI + A  K
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLM--VQNGVRPDHHIFNIQIYAYVK 308

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              +  ++   N M  +G  PD+++    +  L
Sbjct: 309 CGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGL 341



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 162/351 (46%), Gaps = 47/351 (13%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+ SL+  Y +SG  K    +L +M R  +     ++  +     K     EA  + ++
Sbjct: 192 TTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNS 251

Query: 144 MVDE---------------FHCKRTVKSFNSVLNVIIQEGL---YHR-ALEFYNHIV--- 181
           M+                 +  K  +   N+++++++Q G+   +H   ++ Y ++    
Sbjct: 252 MIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGR 311

Query: 182 ---------NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
                      +   ++P+ +++  +I  +C++G +D A+  F +M      PDI  +  
Sbjct: 312 LDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTN 371

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           L+ G     + ++A  L  EM   G  PT V F  +I+ L K G++  A  L D M +  
Sbjct: 372 LIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIAS 431

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN V+YN +IHG  L G LD+ + LLD M++    PN VT+ T+++ ++ +G   D A
Sbjct: 432 VKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVA 491

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
                             +TLI    ++G+ ED + L+++M+ K  K +TV
Sbjct: 492 TC----------------NTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTV 526



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 96/193 (49%), Gaps = 9/193 (4%)

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P TV Y+ LI   C VG  + A   L ++I  G  ANA +++ +++      +   
Sbjct: 7   KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66

Query: 456 AVEI---WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG--CKPDVVAY 510
           A+ I   W    K  C  +   Y+VL+ GLC++ K  EA  +   M   G  C P+VV+Y
Sbjct: 67  AMNIVIRWT--PKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSY 124

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++IHG      V +A  LF EM  L+    PDV T N +++ LCK   +  + ++L  M
Sbjct: 125 TTVIHGFFKEDEVGKAYTLFCEM--LDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQM 182

Query: 571 MDRGCDPDLVTCN 583
            D+   PD  T N
Sbjct: 183 FDKHIMPDCTTYN 195



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 23/274 (8%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           +T+  L+  YA  GD   +  ++  M +         F     AY K   ++EA+  F+ 
Sbjct: 262 ATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNK 321

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M  +      + S+ ++++ + + G    A+  +  +++     + P+ + F  +I    
Sbjct: 322 MRQQ-GLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDD---GLSPDIVVFTNLIHGFS 377

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G  + A +LF EM  R   P +  + T++D L KE ++ EA  L D M +    P  V
Sbjct: 378 MYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVV 437

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL-------------------I 304
           ++N +I+G    G+L    KL+D+M   G  PN VT+NTL                   I
Sbjct: 438 SYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLI 497

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
              C  G ++  ++L   M++     + VT   I
Sbjct: 498 DSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 28/186 (15%)

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y++LI   C  G L  A     Q++  G + + ++++ ++  LC      +A+   N 
Sbjct: 14  VTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAM---NI 70

Query: 533 MLCLEPK--SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG--CDPDLVTCNIFLTA 588
           ++   PK    PDVF+Y +LL  LC +     ++DL++ M + G  C P++V+    +  
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                                 FK       + +   ML + + P   T   ++  LC+ 
Sbjct: 131 F---------------------FKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKV 169

Query: 649 KRIQAA 654
           + +  A
Sbjct: 170 QAMDKA 175


>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/490 (28%), Positives = 236/490 (48%), Gaps = 8/490 (1%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + SL+   A + D   +  +   +R+ +  +       + K++GK  +VEE + ++  M 
Sbjct: 155 YVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKM- 213

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            E   + T+ ++N ++N ++       A   +  + + +   I P+ +T+N +IK  C+ 
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR---IKPDVVTYNTMIKGYCKA 270

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G    A++  R M  +  E D  TY T++     ++     V L  EM   G    P  F
Sbjct: 271 GQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAF 330

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           +++I GLCK G+L     + +NM  KG  PN   Y  LI G    G+++ A+ LL RM+ 
Sbjct: 331 SLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMID 390

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               P+ VTY  ++NGL K GR  +      +       +N   YS+LI GL K G+ ++
Sbjct: 391 EGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDE 450

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM-INNGCAANAFTYSSLM 444
           A +L+++M EKGC  ++  Y+ALID   + GK DEA  +   M    GC    +TY+ L+
Sbjct: 451 AERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILI 510

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G F+  +  +A+++W  M          C   L  GLC  GK+  A  +  ++   G  
Sbjct: 511 SGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGVI 570

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D  A   MI+ LC AG ++EA KL + +   E   +       +++NAL K      ++
Sbjct: 571 LD-AACEDMINTLCKAGRIKEACKLADGI--TERGREVPGRIRTVMINALRKVGKADLAM 627

Query: 565 DLLNSMMDRG 574
            L++S +  G
Sbjct: 628 KLMHSKIGIG 637



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 180/358 (50%), Gaps = 1/358 (0%)

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           +L+    K   ++E + +  +M+ +G  PT  T+N L+NGL     +  A ++ + M   
Sbjct: 192 SLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESG 251

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
              P+ VTYNT+I G C  G   KA+  L  M       +++TY T+I            
Sbjct: 252 RIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSC 311

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +   M+E+   V  + +S +I GL KEGK  +   +++ M+ KG KPN  +Y+ LIDG
Sbjct: 312 VALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDG 371

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
             + G  ++A  +L  MI+ G   +  TYS ++ G  ++G+  +A++ ++    N    N
Sbjct: 372 YAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAIN 431

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + YS LI GL + G++ EA  ++ +M  +GC  D   Y+++I      G V+EAL LF 
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFK 491

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            M   E   Q  V+TY IL++ + K+     ++ L + M+D+G  P         T L
Sbjct: 492 RMEEEEGCDQT-VYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGL 548



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 191/429 (44%), Gaps = 30/429 (6%)

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF---NVLINGLCKNGELGRAAKLVD 286
           Y +L+D L     +D    +  E++    F  P+T    N LI    K G +     +  
Sbjct: 155 YVSLVDVLALAKDVDRIRFICSEIRK---FEFPMTVSPGNSLIKSFGKLGMVEELLWVWR 211

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M   G  P   TYN L++GL     +D A  + + M + +  P+ VTY T+I G  K G
Sbjct: 212 KMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAG 271

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           +       L  ME +    ++  Y T+I   + +      + L+++M EKG +     +S
Sbjct: 272 QTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFS 331

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
            +I GLC+ GK +E   +   MI  G   N   Y+ L+ G+ ++G    A+ +   M   
Sbjct: 332 LVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDE 391

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
               + V YSV+++GLC++G++ EA   +      G   + + YSS+I GL  AG V+EA
Sbjct: 392 GFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEA 451

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR-GCDPDLVTCNIF 585
            +LF EM   E     D + YN L++A  K   +  ++ L   M +  GCD  + T  I 
Sbjct: 452 ERLFEEMS--EKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTIL 509

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
           ++ +                     FK  R     K+ ++M+ K ++P  +    +   L
Sbjct: 510 ISGM---------------------FKEHRNEEALKLWDMMIDKGITPTAACLRALSTGL 548

Query: 646 CRPKRIQAA 654
           C   ++  A
Sbjct: 549 CLSGKVARA 557


>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
 gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
          Length = 695

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 227/471 (48%), Gaps = 42/471 (8%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N++++ + + G+   A  +   +      +  PN +++N++I   C+   ++ A+   R
Sbjct: 13  YNNLISCLCKAGMLAEAESYLKRMPQ----HCAPNVVSYNIIIDGYCKARNIEKALAFLR 68

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM      P  + Y +++   CK   + +A+ +  EM   GC P  V FNVL++GL +  
Sbjct: 69  EMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRAR 128

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           ++  A +L  +M  +GC P+ VTYNT+I GLC    LD+AV LL+RM      P  VTY 
Sbjct: 129 KIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYT 188

Query: 337 TIINGLVKL-----------------------------------GRAVDGARVLMSMEER 361
           T+I+ L K                                    G+ V+ +RV   M  +
Sbjct: 189 TLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRK 248

Query: 362 KFHVNEYIYSTLISGLFK-EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
              + +  YS ++ GL K +G   +A KL  +MM K   P+   YS LI+GLC+  +P E
Sbjct: 249 NVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGE 308

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A+E+  EM   G +    TY++L++G   + K   A+E+   M     + +   Y+++I 
Sbjct: 309 AKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIR 368

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL--EP 538
           G C +G   EA  ++  M+  G   +   Y+ MI G     +   A  LF  M     + 
Sbjct: 369 GFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDK 428

Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              P++FTY IL+++LCK   +  +  LL++M D+G  P L    + L+ L
Sbjct: 429 VPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRL 479



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/581 (26%), Positives = 266/581 (45%), Gaps = 68/581 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  I   Y KA  +E+A+     M +E     T  +++S++    + G   +A++ +  
Sbjct: 46  SYNIIIDGYCKARNIEKALAFLREM-EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAE 104

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  AK     P+ + FN+++  + R   +  A +LFR M  R C+PD+ TY T++ GLCK
Sbjct: 105 M-PAKGCE--PDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCK 161

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK------------------------- 274
             +LDEAV LL+ M+ +   PT VT+  LI+ LCK                         
Sbjct: 162 WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPA 221

Query: 275 ----------NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC-LKGNLDKAVSLLDRM 323
                      G+L  A+++  +M  K     + TY+ ++ GL  + G   +A  L+  M
Sbjct: 222 YSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEM 281

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +  K  P+   Y  +INGL K  R  +   +   M  R        Y+TL+ GL    K 
Sbjct: 282 MGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKL 341

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +DAM+L   M+++G  P+T  Y+ +I G C  G  +EA  +  +MI +G   N +TY+ +
Sbjct: 342 QDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFM 401

Query: 444 MKGFFESGKGHKAVEIWKDM--AKNNCVY--NEVCYSVLIHGLCEDGKLREARMVWTQML 499
           + GF +      A  ++K M   KN+ V   N   Y +LI  LC+  ++ EA  + + M 
Sbjct: 402 IVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 461

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            +G  P +  +  ++  L  AG +++A +L+ EM  +    Q  V + NILL+ + ++ +
Sbjct: 462 DKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRI--NCQQLVGSSNILLDGILRRGS 519

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +  + D L  M D G  PD  T                      ++L + L  + +    
Sbjct: 520 VDEAKDFLKQMTDTGIVPDKFT---------------------YDKLVVGLCWQGKADQA 558

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN-KCW 659
            K+VE +++    P+     +++  LC     Q A    CW
Sbjct: 559 RKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCW 599



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 174/351 (49%), Gaps = 8/351 (2%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G FP  + +N LI+ LCK G L  A   +  M  + C PN V+YN +I G C   N++KA
Sbjct: 5   GLFPNAILYNNLISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKA 63

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           ++ L  M      P    Y +I+    K G       V   M  +    +   ++ L+SG
Sbjct: 64  LAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSG 123

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L++  K  +A +L++ M  +GCKP+ V Y+ +I GLC+  K DEA  +L  M     +  
Sbjct: 124 LWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPT 183

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY++L+    +  +  +A E+++ MA+  C   E  YSVL + L   GKL EA  V++
Sbjct: 184 FVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYS 243

Query: 497 QMLSRGCKPDVVAYSSMIHGLC--NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
            M  +        YS ++ GL   + G+VE A KL  EM  +  K  PD + Y+IL+N L
Sbjct: 244 DMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAA-KLVTEM--MGKKIAPDFYAYSILINGL 300

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFL 603
           CK      + ++   M  RG  P +VT N  L  L    KL+   + T F+
Sbjct: 301 CKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFM 351



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 131/496 (26%), Positives = 225/496 (45%), Gaps = 22/496 (4%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIF---IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK 155
           +K L+  ++ + R K+  +  +F+    +     K   +++A  +F  M  E  C  T  
Sbjct: 162 WKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMA-EGPCACTEP 220

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL-GLVDNAIQL 214
           +++ + N + + G    A   Y+ +      N+     T++LV+  + ++ G    A +L
Sbjct: 221 AYSVLFNKLQRAGKLVEASRVYSDMCRK---NVCMTDNTYSLVVLGLSKMDGGNVEAAKL 277

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
             EM  +   PD Y Y  L++GLCK  R  EA  +  EM+  G  PT VT+N L+ GL  
Sbjct: 278 VTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLS 337

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
             +L  A +L   M  +G LP+  +YN +I G C  G+ ++A  L   M+    + N  T
Sbjct: 338 TAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWT 397

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFH----VNEYIYSTLISGLFKEGKAEDAMKLW 390
           Y  +I G +K         +   M+  K       N + Y  LIS L K  + E+A KL 
Sbjct: 398 YNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLL 457

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M +KG  P+  ++  L+  L R G+ D+A E+  EM    C     + + L+ G    
Sbjct: 458 SAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRR 517

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G   +A +  K M     V ++  Y  L+ GLC  GK  +AR +  +++  G +P+    
Sbjct: 518 GSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGL 577

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF--TYNILLNALCKQSNISHSIDLLN 568
             ++  LC  G  + A + +    C  P    +V    +N L+ + C    ++  +D L+
Sbjct: 578 RQLLGALCAQGDFQGAYEFY----CWLPSVGVEVTLGMHNTLVTSCC----LARKLDYLD 629

Query: 569 SMMDRGCDPDLVTCNI 584
            +  R   PD++   I
Sbjct: 630 MIEQREGVPDVIVERI 645



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 53/308 (17%)

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT------------- 439
           M+E G  PN ++Y+ LI  LC+ G   EAE  L  M  + CA N  +             
Sbjct: 1   MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59

Query: 440 ----------------------YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
                                 YSS+++ F ++G   KA++++ +M    C  + V ++V
Sbjct: 60  IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           L+ GL    K+ EAR ++  M SRGCKPDVV Y++MI GLC    ++EA+ L   M   +
Sbjct: 120 LLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERM--KQ 177

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK---LE 594
               P   TY  L++ LCK + +  + ++   M +  C       ++    L+     +E
Sbjct: 178 EDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVE 237

Query: 595 APQDGTDFL--------NELAIRLFKRQRTSGG----FKIVEVMLQKFLSPQTSTWERVV 642
           A +  +D          N  ++ +    +  GG     K+V  M+ K ++P    +  ++
Sbjct: 238 ASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILI 297

Query: 643 QELCRPKR 650
             LC+ +R
Sbjct: 298 NGLCKARR 305


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 246/502 (49%), Gaps = 8/502 (1%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVD 146
           ++Q    +GD      +L RM R +      +F +  +     ++    +A+++F  MVD
Sbjct: 163 VVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVD 222

Query: 147 EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG 206
                  + ++N++++  ++ G         + ++   H    PN +T+N+++  +CR G
Sbjct: 223 MGVAPNRI-TYNTMIDGHVKGGDLEAGFRLRDQML---HDGPKPNVVTYNVLLSGLCRTG 278

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
            +D    L  EM   +  PD +TY  L DGL +       + L  E    G      T +
Sbjct: 279 RMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCS 338

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +L+NGLCK+G++ +A ++ + +   G +P  V YNTLI+G C   +L  A  + ++M + 
Sbjct: 339 ILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSR 398

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
              P+ +TY  +INGL KL        ++M ME+     +   ++TLI      G+ E  
Sbjct: 399 HIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKC 458

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
             +   M +KG K + + + +++   C+ GK  EA  IL +MI    A NA  Y+S++  
Sbjct: 459 FTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDA 518

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           + ESG   +A+ + + M  +    + V Y++L+ GLC   ++ EA  +   + ++G +PD
Sbjct: 519 YIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPD 578

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           VV+Y+++I   CN G  ++AL+L  EM   +   +P + T + L++AL     +     L
Sbjct: 579 VVSYNTIISACCNKGDTDKALELLQEM--NKYGIRPTLRTCHTLVSALASAGRVHDMECL 636

Query: 567 LNSMMDRGCDPDLVTCNIFLTA 588
              M+ +  +P      I + A
Sbjct: 637 YQQMLHKNVEPSSSIYGIMVDA 658



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 214/436 (49%), Gaps = 39/436 (8%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP--DIYTYCTLMDGLCKENRLDEAV 247
           P+T  +N V++     G +D A+ + R M      P  D ++Y  ++ GL +  +  +A+
Sbjct: 155 PDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDAL 214

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            + DEM   G  P  +T+N +I+G  K G+L    +L D M   G  PN VTYN L+ GL
Sbjct: 215 KVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGL 274

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G +D+  +L+D M +   +P+  TY  + +GL + G +     +     ++   +  
Sbjct: 275 CRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGA 334

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG----------- 416
           Y  S L++GL K+GK   A ++++ ++  G  P TV+Y+ LI+G C+V            
Sbjct: 335 YTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQ 394

Query: 417 ------KPD------------------EAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
                 +PD                  +AE+++ EM  +G   +  T+++L+  +  +G+
Sbjct: 395 MKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQ 454

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             K   +  DM +     + + +  ++   C++GK+ EA  +   M+ +   P+   Y+S
Sbjct: 455 LEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNS 514

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I     +G  E+AL L  +M          + TYN+LL  LC+ S I  + +L+ ++ +
Sbjct: 515 IIDAYIESGDTEQALLLVEKMK--NSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRN 572

Query: 573 RGCDPDLVTCNIFLTA 588
           +G  PD+V+ N  ++A
Sbjct: 573 QGLRPDVVSYNTIISA 588



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 222/439 (50%), Gaps = 15/439 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+N V+  + + G    AL+ ++ +V+   M + PN +T+N +I    + G ++   +L 
Sbjct: 196 SYNVVIAGLWRSGKGSDALKVFDEMVD---MGVAPNRITYNTMIDGHVKGGDLEAGFRLR 252

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M     +P++ TY  L+ GLC+  R+DE   L+DEM      P   T+++L +GL + 
Sbjct: 253 DQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT 312

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           GE      L      KG +    T + L++GLC  G + KA  + + +V +  +P  V Y
Sbjct: 313 GESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIY 372

Query: 336 GTIINGLVKLGRAVDGAR-VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
            T+ING  ++ R + GA  +   M+ R    +   Y+ LI+GL K      A  L  +M 
Sbjct: 373 NTLINGYCQV-RDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 431

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           + G  P+   ++ LID     G+ ++   +L +M   G  ++  ++ S++K F ++GK  
Sbjct: 432 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 491

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +AV I  DM   +   N   Y+ +I    E G   +A ++  +M + G    +V Y+ ++
Sbjct: 492 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLL 551

Query: 515 HGLCNAGSVEEALKLF----NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
            GLC +  ++EA +L     N+ L      +PDV +YN +++A C + +   +++LL  M
Sbjct: 552 KGLCRSSQIDEAEELIYTLRNQGL------RPDVVSYNTIISACCNKGDTDKALELLQEM 605

Query: 571 MDRGCDPDLVTCNIFLTAL 589
              G  P L TC+  ++AL
Sbjct: 606 NKYGIRPTLRTCHTLVSAL 624



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/340 (22%), Positives = 162/340 (47%), Gaps = 4/340 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V +A ++F  +V       TV  +N+++N   Q      A   +  +   K  +I P+ +
Sbjct: 350 VAKAKQVFEMLVHTGLVPTTV-IYNTLINGYCQVRDLRGAFCIFEQM---KSRHIRPDHI 405

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T+N +I  +C+L +V  A  L  EM     +P + T+ TL+D      +L++   +L +M
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           Q  G     ++F  ++   CKNG++  A  ++D+M  K   PN   YN++I      G+ 
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 525

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           ++A+ L+++M  S    + VTY  ++ GL +  +  +   ++ ++  +    +   Y+T+
Sbjct: 526 EQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTI 585

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           IS    +G  + A++L ++M + G +P       L+  L   G+  + E +  +M++   
Sbjct: 586 ISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNV 645

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
             ++  Y  ++  +       K   + K+M++    +++ 
Sbjct: 646 EPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDDT 685



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 21/177 (11%)

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           ++L+  L   G+  + R  +  +++ G +PD  A++ ++     AG ++ AL +   M  
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGR 185

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
            E    PD F+YN+++  L +    S ++ + + M+D G  P+ +T N  +         
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMI--------- 236

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
             DG            K      GF++ + ML     P   T+  ++  LCR  R+ 
Sbjct: 237 --DGH----------VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMD 281



 Score = 45.1 bits (105), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 76/172 (44%), Gaps = 4/172 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + S+I  Y  SGD +   +++ +M+         ++  + K   ++  ++EA  L +T+ 
Sbjct: 512 YNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 571

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           ++   +  V S+N++++    +G   +ALE    +       I P   T + ++  +   
Sbjct: 572 NQ-GLRPDVVSYNTIISACCNKGDTDKALELLQEM---NKYGIRPTLRTCHTLVSALASA 627

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           G V +   L+++M  +N EP    Y  ++D   +     +   L  EM   G
Sbjct: 628 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 679


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 252/520 (48%), Gaps = 50/520 (9%)

Query: 75  KLGSYQLGDSTFYSLIQH-YANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHL 133
           K+ S  + +S  Y+ I H Y   G FK+   VL  M R+                     
Sbjct: 251 KMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDS-------------------- 290

Query: 134 VEEAIRLFHTMVDEF-HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           V+  +  ++ M+D+    KR+ ++F     ++++                 +  ++ P+ 
Sbjct: 291 VQADVYTYNIMIDKLCRIKRSTRAF-----LLLKR---------------MRKDDLTPDE 330

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
            T+N +I    R G +++A  +F  M  +N  P + TY T++DG C+  R+D+A+ +L E
Sbjct: 331 CTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSE 390

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           MQ+ G  P+ +T++ L+NG CK   LG A  L++++  +G   N+     LI G C  G 
Sbjct: 391 MQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGE 450

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           + KA  +L  M      P+ +TY  +ING+ ++ +  +   +L  M++     N+ +Y+T
Sbjct: 451 ISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTT 510

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI    K G  ++A+K +  +  +G   N V+++AL+    R G   EAE     M    
Sbjct: 511 LICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMN 570

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
            + ++ +++ ++  +   G    A  ++ DM +     N   Y  L+ GLC+ G L +AR
Sbjct: 571 ISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQAR 630

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNI 549
              + +L      D   +++++ G+C  G+++EAL L  +M+   CL     PD+ TY I
Sbjct: 631 QFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCL-----PDIHTYTI 685

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           LL+  C++  I  ++ +L  M+++G  PD V     L  L
Sbjct: 686 LLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGL 725



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 162/638 (25%), Positives = 284/638 (44%), Gaps = 99/638 (15%)

Query: 88  SLIQHYANSG-----DFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           S+++H A +G      F SL   + R      VV E     + KAY K   V +A     
Sbjct: 125 SVLKHLAVTGFSCTAIFTSLLRTISRFDPTNHVVFE----LLVKAYVKERKVLDAAVAVL 180

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEG------LYHRALEFYNHIVNAKHMNILPNTL--- 193
            M D+   K +  S N++LN +++EG      L+ R        +     NIL N+L   
Sbjct: 181 FM-DDCGFKASPVSCNTILNALVEEGESKHVWLFLRESLARKFPLGVTTCNILLNSLCTN 239

Query: 194 ----------------------TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
                                 T+N ++    + G    A+ +  +M   + + D+YTY 
Sbjct: 240 GEFRKAEDMLQKMKSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYN 299

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            ++D LC+  R   A LLL  M+ D   P   T+N LING  + G++  A  + ++M  +
Sbjct: 300 IMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQ 359

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
             +P+  TY T+I G C    +DKA+S+L  M  +  MP+E+TY  ++NG  K+      
Sbjct: 360 NLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPA 419

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             ++  ++ R   +N+ + + LI G  + G+   A ++ K M E G  P+ + YSALI+G
Sbjct: 420 IYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALING 479

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           +CR+ K  E +EIL  M  +G   N   Y++L+  + ++G   +A++ + D+ +   V N
Sbjct: 480 MCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVAN 539

Query: 472 EVCYSVLIHGLCEDGKLREA--------RM---------------------------VWT 496
            V ++ L+H    +G + EA        RM                           V+ 
Sbjct: 540 PVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYD 599

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M+  G  P+V  Y +++ GLC  G + +A +  + +  L+     D  T+N LL  +C+
Sbjct: 600 DMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCL--LDIPFAIDEKTFNALLLGICR 657

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
              +  ++DL   M+   C PD+ T  I L+                        ++ + 
Sbjct: 658 YGTLDEALDLCEKMIKNNCLPDIHTYTILLSG---------------------FCRKGKI 696

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                I+++ML+K + P T  +  ++  L    +++AA
Sbjct: 697 LPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAA 734



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 142/527 (26%), Positives = 248/527 (47%), Gaps = 45/527 (8%)

Query: 120  SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
            SF  I  +Y     +  A  ++  MV  +     V ++ ++L  + Q G   +A +F + 
Sbjct: 577  SFNRIIDSYCHRGNIVGAFSVYDDMV-RYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSC 635

Query: 180  IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
            +++   +    +  TFN ++  +CR G +D A+ L  +M   NC PDI+TY  L+ G C+
Sbjct: 636  LLD---IPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCR 692

Query: 240  ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA----------------- 282
            + ++  A+++L  M   G  P  V +  L+NGL   G++  A+                 
Sbjct: 693  KGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCI 752

Query: 283  -------------------KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
                               +++ +M+     PN  +YN L+HG   +G   K++ L   M
Sbjct: 753  AYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYM 812

Query: 324  VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            V     P+ VTY  +I GL + G      + L  M       +  ++  LI+   ++ K 
Sbjct: 813  VRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKM 872

Query: 384  EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
             +A++++  M      P++  +SA+I+GL R G  D + ++L EM+  G   N   Y +L
Sbjct: 873  HNALQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIAL 932

Query: 444  MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
            +      G+  +A  + ++M     V  EV  S +I GLC  GKL EA +V++ M+  G 
Sbjct: 933  VNAKCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGM 992

Query: 504  KPDVVAYSSMIHGLCNAGSVEEALKLFNEM-LCLEPKSQPDVFTYNILLNALCKQSNISH 562
             P V  +++++H LC    + +AL L   M LC   + + DV +YN+L+  LCK  +IS 
Sbjct: 993  VPTVATFTTLMHSLCKESKIADALHLKRLMELC---RLRVDVVSYNVLITGLCKDKHISD 1049

Query: 563  SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            ++DL   M  +G  P+ +T  I LT         Q+G + L ++  R
Sbjct: 1050 ALDLYGEMKSKGLWPN-ITTYITLTGAMYSTGRVQNGEELLEDIEER 1095



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 136/550 (24%), Positives = 247/550 (44%), Gaps = 53/550 (9%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV------NAKHMNIL- 189
           A+++  ++V+     R    +   + ++IQ  ++ +A+    H+        A   ++L 
Sbjct: 87  ALKILSSIVERSGLDRITYVYCMAVPILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLR 146

Query: 190 -------PNTLTFNLVIKT-VCRLGLVDNAIQL-------FREMPVRNCEPDIYTYCTLM 234
                   N + F L++K  V    ++D A+ +       F+  PV +C        T++
Sbjct: 147 TISRFDPTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPV-SCN-------TIL 198

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTF-NVLINGLCKNGELGRAAKLVDNMFLKGC 293
           + L +E       L L E  +   FP  VT  N+L+N LC NGE  +A  ++  M  K C
Sbjct: 199 NALVEEGESKHVWLFLRE-SLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKM--KSC 255

Query: 294 -LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
            + N VTYNT++H    KG    A+ +L+ M       +  TY  +I+ L ++ R+    
Sbjct: 256 HISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAF 315

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +L  M +     +E  Y+TLI+G F+EGK   A  ++  M+ +   P+   Y+ +IDG 
Sbjct: 316 LLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGY 375

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           CR  + D+A  IL EM   G   +  TYS+L+ G+ +      A+ + +D+       N+
Sbjct: 376 CRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITINK 435

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
              ++LI G C+ G++ +A+ +   M   G  PDV+ YS++I+G+C    + E  ++ + 
Sbjct: 436 TMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSR 495

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--- 589
           M   +    P+   Y  L+   CK   +  ++     +  RG   + V  N  L A    
Sbjct: 496 MQ--KSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYRE 553

Query: 590 ------------KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
                         ++    D   F N +      R    G F + + M++   SP   T
Sbjct: 554 GMITEAEHFRQYMSRMNISFDSVSF-NRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCT 612

Query: 638 WERVVQELCR 647
           ++ +++ LC+
Sbjct: 613 YQNLLRGLCQ 622



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 147/646 (22%), Positives = 269/646 (41%), Gaps = 104/646 (16%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + T+ +LI  +   G       V   M R+  V    ++  +   Y +   +++A+    
Sbjct: 330 ECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKAL---- 385

Query: 143 TMVDEFHCKRTVKS---FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           +++ E      + S   ++++LN   +  +   A+     +   K   I  N     ++I
Sbjct: 386 SILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDL---KSRGITINKTMRTILI 442

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
              C++G +  A Q+ + M     +PD+ TY  L++G+C+  ++ E   +L  MQ  G  
Sbjct: 443 DGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQKSGIL 502

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL------------ 307
           P  V +  LI   CK G +  A K   +++ +G + N V +N L+H              
Sbjct: 503 PNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAFYREGMITEAEHF 562

Query: 308 -----------------------CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
                                  C +GN+  A S+ D MV     PN  TY  ++ GL +
Sbjct: 563 RQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQ 622

Query: 345 LGRAVDGARVLMSMEERKFHVNE-----------------------------------YI 369
            G  V   + +  + +  F ++E                                   + 
Sbjct: 623 GGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHT 682

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ L+SG  ++GK   A+ + + M+EKG  P+TV Y+ L++GL   G+   A  +  E+I
Sbjct: 683 YTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEII 742

Query: 430 -NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G  A+   Y+SLM G+ +S   +    +  DM +N    N   Y++L+HG  + G+ 
Sbjct: 743 CKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQF 802

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            ++  ++  M+ +G +PD V Y  +I GL   G ++ A+K   +M+ LE    PD   ++
Sbjct: 803 SKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMV-LE-GIFPDRLVFD 860

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           IL+ A  ++S + +++ + N M      P   T +  +  L  K         +L+    
Sbjct: 861 ILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAMINGLIRK--------GYLDH--- 909

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                       K++  MLQ  L P  + +  +V   CR   I  A
Sbjct: 910 ----------SHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRA 945



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 213/462 (46%), Gaps = 47/462 (10%)

Query: 155  KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQL 214
            K+FN++L  I + G    AL+    ++     N LP+  T+ +++   CR G +  A+ +
Sbjct: 646  KTFNALLLGICRYGTLDEALDLCEKMIKN---NCLPDIHTYTILLSGFCRKGKILPALVI 702

Query: 215  FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE---------------------- 252
             + M  +   PD   Y  L++GL  E ++  A  +  E                      
Sbjct: 703  LQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYL 762

Query: 253  --------------MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
                          M  +  +P   ++N+L++G  K G+  ++  L   M  KG  P+ V
Sbjct: 763  KSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNV 822

Query: 299  TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
            TY  LI GL   G +D AV  L++MV     P+ + +  +I    +  +  +  +V   M
Sbjct: 823  TYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCM 882

Query: 359  EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +      +   +S +I+GL ++G  + + K+  +M++ G +PN   Y AL++  CRVG+ 
Sbjct: 883  KWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEI 942

Query: 419  DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            D A  +  EM   G        SS+++G    GK  +AV ++  M ++  V     ++ L
Sbjct: 943  DRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTL 1002

Query: 479  IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
            +H LC++ K+ +A  +   M     + DVV+Y+ +I GLC    + +AL L+ EM     
Sbjct: 1003 MHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEM----- 1057

Query: 539  KSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
            KS+   P++ TY  L  A+     + +  +LL  + +RG  P
Sbjct: 1058 KSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 118/260 (45%), Gaps = 32/260 (12%)

Query: 401 NTVVYSALIDGLCRVGKP-DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG-HKAVE 458
           N VV+  L+    +  K  D A  +LF M + G  A+  + ++++    E G+  H  + 
Sbjct: 155 NHVVFELLVKAYVKERKVLDAAVAVLF-MDDCGFKASPVSCNTILNALVEEGESKHVWLF 213

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK-PDVVAYSSMIHGL 517
           + + +A+   +    C ++L++ LC +G+ R+A  +  +M  + C   + V Y++++H  
Sbjct: 214 LRESLARKFPLGVTTC-NILLNSLCTNGEFRKAEDMLQKM--KSCHISNSVTYNTILHWY 270

Query: 518 CNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
              G  + AL +  +M   E  S Q DV+TYNI+++ LC+    + +  LL  M      
Sbjct: 271 VKKGRFKAALCVLEDM---ERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLT 327

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
           PD  T N  +                        F+  + +    +   ML++ L P  +
Sbjct: 328 PDECTYNTLINGF---------------------FREGKINHARYVFNHMLRQNLVPSVA 366

Query: 637 TWERVVQELCRPKRIQAAIN 656
           T+  ++   CR +RI  A++
Sbjct: 367 TYTTMIDGYCRNRRIDKALS 386


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 203/401 (50%), Gaps = 2/401 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LPN + +N VI    + G V+ A  LF EM  R   PD+ TY  +++ LCK   +D+A  
Sbjct: 213 LPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEA 272

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           +L +M   G  P   T+N LI G    G+   A ++   M  +G LP+ VT N+L+  LC
Sbjct: 273 ILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLC 332

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G +  A  + D M       +  +Y  ++NG    G  VD   +   M       + +
Sbjct: 333 KHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSH 392

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           I++ LI    K G  + A  ++ +M E+G +P+ V YS +I  LCR+GK D+A E   +M
Sbjct: 393 IFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQM 452

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           I+ G A +  TY  L++GF   G   KA ++   M       +  C++ +I+ LC+ G++
Sbjct: 453 IDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRV 512

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A+ ++   +S G  P+V+ Y++++ G C  G +E AL++F+ M  +    QP+V  Y 
Sbjct: 513 MDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVM--VSAGIQPNVVVYG 570

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            L+N  CK   I   + L   ++ +G  P     NI L  L
Sbjct: 571 TLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGL 611



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 245/463 (52%), Gaps = 13/463 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ SLI  Y+++G +K    V  +M  +     VV   S +     +GK   +++A  +F
Sbjct: 288 TYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGK---IKDARDVF 344

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            +M  +   K  + S+  +LN    +G      E +N +++     I P++  FN++IK 
Sbjct: 345 DSMAMKGQ-KTDIFSYKIMLNGYATKGCLVDLTELFNLMLSD---GIAPDSHIFNVLIKA 400

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             + G++D A  +F EM  +  EPD+ TY T++  LC+  ++D+AV   ++M   G  P+
Sbjct: 401 YAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPS 460

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             T++ LI G C +G+L +A  LV  M  KG  P+   +N +I+ LC  G +  A ++ D
Sbjct: 461 ISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFD 520

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             ++    PN + Y T+++G   +G+  +  RV   M       N  +Y TL++G  K G
Sbjct: 521 FTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVG 580

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + ++ + L+++++ KG KP+T +Y+ ++ GL + G+   A+    EM  +G A + +TYS
Sbjct: 581 RIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYS 640

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            ++ G F++    +A+ ++K++   N   +    +++I G+ +  ++ EA+ ++  +   
Sbjct: 641 IVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRS 700

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQ 541
           G  P VV YS M+  L   G VEEA  +F+ M    C +P SQ
Sbjct: 701 GLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQ 743



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 143/537 (26%), Positives = 244/537 (45%), Gaps = 43/537 (8%)

Query: 100 KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFH-CKRTVKSFN 158
           ++L+++L+RM     V    S+  + K+        +A  L   M +    C     ++N
Sbjct: 161 EALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYN 220

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           +V++   +EG  ++A + +N +V      I P+  T+N V+  +C+   +D A  + R+M
Sbjct: 221 TVIDGFFKEGDVNKACDLFNEMV---QRGISPDLSTYNCVVNALCKARAMDKAEAILRQM 277

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
             +   PD +TY +L+ G     +  EAV +  +M   G  P  VT N L+  LCK+G++
Sbjct: 278 VDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKI 337

Query: 279 GRAAKLVDNMFLKG-------------------CL----------------PNEVTYNTL 303
             A  + D+M +KG                   CL                P+   +N L
Sbjct: 338 KDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVL 397

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I      G LD+A  + + M      P+ VTY T+I  L ++G+  D       M ++  
Sbjct: 398 IKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGV 457

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y  LI G    G    A  L  QMM KG +P+   ++ +I+ LC++G+  +A+ 
Sbjct: 458 APSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQN 517

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           I    I+ G   N   Y++LM G+   GK   A+ ++  M       N V Y  L++G C
Sbjct: 518 IFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYC 577

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G++ E   ++ ++L +G KP    Y+ ++HGL  AG    A   F+EM   E     D
Sbjct: 578 KVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEM--TESGIAMD 635

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQD 598
            +TY+I+L  L K S    +I L   +       D+ T NI +  + +  ++E  +D
Sbjct: 636 RYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKD 692



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 131/503 (26%), Positives = 234/503 (46%), Gaps = 60/503 (11%)

Query: 211 AIQLF----REMPVRNCEPDIYTYCTLMD------------------------------- 235
           A+ LF    R    R   P ++TY  LMD                               
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147

Query: 236 ----GLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
               GLC+  R  EA+ +LL  M   GC P   ++ +++  LC + + G+A +L+  M  
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE 207

Query: 291 KG--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
            G  CLPN V YNT+I G   +G+++KA  L + MV     P+  TY  ++N L K  RA
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCK-ARA 266

Query: 349 VDGAR-VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
           +D A  +L  M ++    + + Y++LI G    G+ ++A+++ K+M  +G  P+ V  ++
Sbjct: 267 MDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNS 326

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           L+  LC+ GK  +A ++   M   G   + F+Y  ++ G+   G      E++  M  + 
Sbjct: 327 LMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDG 386

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
              +   ++VLI    + G L  A +++ +M  +G +PDVV YS++I  LC  G +++A+
Sbjct: 387 IAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAV 446

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
           + FN+M  ++    P + TY+ L+   C   ++  + DL+  MM++G  PD+   N  + 
Sbjct: 447 EKFNQM--IDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504

Query: 588 ALKE--KLEAPQDGTDF------------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
            L +  ++   Q+  DF             N L        +     ++ +VM+   + P
Sbjct: 505 NLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564

Query: 634 QTSTWERVVQELCRPKRIQAAIN 656
               +  +V   C+  RI   ++
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLS 587



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/343 (22%), Positives = 144/343 (41%), Gaps = 42/343 (12%)

Query: 84  STFYSLIQHYANSGDF-KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           ST++ LIQ +   GD  K+ ++VL  M +  R  +   F FI     K   V +A  +F 
Sbjct: 462 STYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDI-GCFNFIINNLCKLGRVMDAQNIFD 520

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             +        V  +N++++     G    AL  ++ +V+A    I PN + +  ++   
Sbjct: 521 FTI-SIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSA---GIQPNVVVYGTLVNGY 576

Query: 203 CRLGLVDNAIQLFREMPVRNCEP-----------------------------------DI 227
           C++G +D  + LFRE+  +  +P                                   D 
Sbjct: 577 CKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDR 636

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
           YTY  ++ GL K +  DEA+LL  E+          T N++I G+ +   +  A  L  +
Sbjct: 637 YTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFAS 696

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC-MPNEVTYGTIINGLVKLG 346
           +   G +P+ VTY+ ++  L  +G +++A  +   M  + C  PN      ++  L++  
Sbjct: 697 ISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKR 756

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
             V     L  ++ER F ++    + LI     +G   + ++ 
Sbjct: 757 EIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGTCREHIRF 799


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 237/496 (47%), Gaps = 11/496 (2%)

Query: 96  SGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFHTMVDEFHCKRT 153
           S  F ++  +L+ + + +   +  + ++  I  A+ K+ L+++A+  F+ MVD+    R 
Sbjct: 69  SSPFFTVPSLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRP 128

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
              FNS+L  +++   + +A  F+N +      ++     +F ++IK  C  G +D + Q
Sbjct: 129 -NIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVY----SFGIMIKGCCENGNLDKSFQ 183

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L   +      P++  Y TL+DG CK   ++ A L  D+M   G      TF VLINGL 
Sbjct: 184 LLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLF 243

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G       L + M + G  PN  TYN L++  C +G + +A  L D M       N V
Sbjct: 244 KKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVV 303

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T+I G+ +  R  +  +++  M++     N   Y+TLI G    G  + A  L  Q+
Sbjct: 304 TYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQL 363

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
              G  P+ V Y+ LI+G  + G      ++  EM   G + +  T + L+  +    + 
Sbjct: 364 KSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEM 423

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            KA +I+  M K   V +   Y VLIHGLC  G ++E+  ++  M     +P  V Y++M
Sbjct: 424 EKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTM 483

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           IHG C   +   AL+L  EM   E K   P+V +Y+ ++  LCK      +  LL+ M++
Sbjct: 484 IHGYCKEDNSYRALRLLREM---EAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIE 540

Query: 573 RGCDPDLVTCNIFLTA 588
               P     N+   A
Sbjct: 541 LQLKPSASILNMISKA 556



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/287 (20%), Positives = 124/287 (43%), Gaps = 35/287 (12%)

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A+ L+   +++G +      S L+  L    K   A+ ++ ++++N  ++  FT  SL+ 
Sbjct: 21  ALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLLH 80

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC-- 503
              ++              +N  +   + Y  +I+   +   L +A + + +M+ +G   
Sbjct: 81  HLTQN--------------QNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVDKGLVF 126

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +P++  ++S++  L  +   E+A   FNE   L+ + + DV+++ I++   C+  N+  S
Sbjct: 127 RPNI--FNSLLGSLVRSNCFEKAWLFFNE---LKERVKFDVYSFGIMIKGCCENGNLDKS 181

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAI------------R 609
             LL  + D G  P++V     +        +E  +   D + E+ +             
Sbjct: 182 FQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLING 241

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           LFK+     GF + E M    L P   T+  ++ E C   +I  A +
Sbjct: 242 LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFD 288


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 242/535 (45%), Gaps = 73/535 (13%)

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           Y K  + E+ +  F  M+ +     +V++ N VL V+    + ++A E Y  +V      
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLP-SVRNCNIVLRVLRDSRMMNKAQEVYETMV---MHG 269

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           I+P  +TFN ++ +  + G ++   +++ EM  RN E    TY  L++G  K  +++EA 
Sbjct: 270 IMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEAR 329

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
               +MQ  G   TP +FN LI G CK G    A  + D M   G  P   TYN  I  L
Sbjct: 330 RFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRAL 389

Query: 308 CLKGNLDKAVSLLDRMVASKCM-------------------------------PNEVTYG 336
           C  G +D A  LL  M A   +                               P+ VTY 
Sbjct: 390 CEFGRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYN 449

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+I+GL + G      R+   M  +  + +   Y+TL+ G  K G    A +++ +M+ K
Sbjct: 450 TLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRK 509

Query: 397 GCKPNT------------------------------------VVYSALIDGLCRVGKPDE 420
           G KP+                                      +Y+  IDGLC+VG  ++
Sbjct: 510 GIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEK 569

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A E   ++   G   +  TY+++++G+ E G+   A +++ +M       + + Y VLIH
Sbjct: 570 AIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIH 629

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G  + G+L +A    T+M  RG +P+V+ +++++HG+C AG+++EA +   +M   E   
Sbjct: 630 GHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKM--EEEGI 687

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
            P+ ++Y IL++  C        + L   M+D+  +PD  T       L++  E+
Sbjct: 688 SPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 742



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 203/468 (43%), Gaps = 71/468 (15%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +++     +GD + ++ +   M+R      E ++  +   + K+  +EEA R FH  
Sbjct: 276 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEA-RRFHGD 334

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +       T  SFN ++    ++GL+  A    + ++NA    I P T T+N+ I+ +C 
Sbjct: 335 MQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNA---GIYPTTSTYNIYIRALCE 391

Query: 205 LGLVDNAIQL-------------------------------FREMPVRNCEPDIYTYCTL 233
            G +D+A +L                               F ++   N  P I TY TL
Sbjct: 392 FGRIDDARELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTL 451

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +DGLC+   L+ A  L +EM     +P  +T+  L+ G  KNG L  A ++ D M  KG 
Sbjct: 452 IDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGI 511

Query: 294 LPNE------------------------------------VTYNTLIHGLCLKGNLDKAV 317
            P+                                       YN  I GLC  GNL+KA+
Sbjct: 512 KPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAI 571

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
               ++     +P+ VTY T+I G ++ GR      +   M  ++   +   Y  LI G 
Sbjct: 572 EFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGH 631

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K G+ E A +   +M ++G +PN + ++AL+ G+C+ G  DEA   L +M   G + N 
Sbjct: 632 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNK 691

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
           ++Y+ L+    +  K  + V+++K+M       +   +  L   L +D
Sbjct: 692 YSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKD 739



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 89/223 (39%), Gaps = 17/223 (7%)

Query: 72  STPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAY 128
           +T  +G  +LGDS     +     + D  + ++ +Y +R +   K   LEK+  F  K +
Sbjct: 519 TTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIF 578

Query: 129 G--------------KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
                          + +L +   ++   + DE   KR   S  +   +I       R  
Sbjct: 579 RVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLE 638

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           + + +    K   + PN +T N ++  +C+ G +D A +   +M      P+ Y+Y  L+
Sbjct: 639 QAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILI 698

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
              C  ++ +E V L  EM      P   T   L   L K+ E
Sbjct: 699 SKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 741


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 164/613 (26%), Positives = 278/613 (45%), Gaps = 58/613 (9%)

Query: 58  NAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL 117
           +A      +  +F++ P    +  G      L + Y  +G       VL  M  E  +V+
Sbjct: 154 SAAGRMDLARRVFDAMPARNEFSSG-----ILARGYCRAGRSADALAVLDAMP-EMNLVV 207

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
             + +  F   G+   V+EA RL   M  +      V +FN  ++ + + G    A   +
Sbjct: 208 CNTVVAGFCREGR---VDEAERLVDRMRAQGLAPNVV-TFNGRISALCKAGRVLEAYRIF 263

Query: 178 NHIVNAKHMNI-LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           N +  A    +  P+ +TF++++   C  G+VD A  L   M        + +Y   + G
Sbjct: 264 NDMQEAWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSG 323

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L K  R+ EA  LL EM  +G  P   T+N++++GLCK G+     ++ D +      P+
Sbjct: 324 LVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPD 383

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
            VTY +L+H  C KGN   A  +LD M    C PN  TY  ++  L+K GR  +  R+L 
Sbjct: 384 VVTYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLE 443

Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM----------------------- 393
            M E+ + ++    + +I GL +  K E AM +   M                       
Sbjct: 444 RMSEKGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSS 503

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + K C P+ + YS L++ LC+ G+ DEA++ L EMI    + ++  Y + + G+   GK 
Sbjct: 504 ISKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKT 563

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A+++ +DM K +C  +   Y++LI G  E  K  E   + ++M  +G   +V+ Y+S+
Sbjct: 564 SLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSL 623

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I   C  G V +A+ L +EM  L+ +  P+V ++ +L+ A CK ++ S +         R
Sbjct: 624 IKSFCGRGMVNKAMPLLDEM--LQNEIVPNVTSFGLLIKAFCKTADFSAA--------QR 673

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
             D  L TC       KE L            +   L    R      I+E  L+  +S 
Sbjct: 674 VFDVALSTC-----GQKEVLYCL---------MCTELSTYARWIEAKNILETALEMRISI 719

Query: 634 QTSTWERVVQELC 646
           Q+  ++R++  LC
Sbjct: 720 QSFPYKRIIAGLC 732



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 231/515 (44%), Gaps = 44/515 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK---RTVKSFNSVLNVIIQEGLYHRALEF 176
           +F  +   +  A +V+EA      +VD   C    R V+S+N  L+ +++ G    A E 
Sbjct: 281 TFDVMLSGFCDAGMVDEAT----VLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQEL 336

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR-EMPVRN--CEPDIYTYCTL 233
            + +    H  + PN+ T+N+++  +C+ G    A  + R E  VR+    PD+ TY +L
Sbjct: 337 LSEMA---HEGVQPNSYTYNIIVDGLCKEG---KAFDVRRVEDFVRSGVMTPDVVTYTSL 390

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +   C +     A  +LDEM   GC P   T+NVL+  L K G      +L++ M  KG 
Sbjct: 391 LHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGY 450

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRM-----------------------VASKCMP 330
             +  + N +I GLC    L+ A+ ++D M                       ++  C+P
Sbjct: 451 SLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLP 510

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           + +TY T++N L K GR  +  + L+ M  +    +  IY T I G    GK   A+K+ 
Sbjct: 511 DRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVL 570

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           + M ++ C P+T  Y+ LI G     K DE  +++ EM   G ++N  TY+SL+K F   
Sbjct: 571 RDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGR 630

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G  +KA+ +  +M +N  V N   + +LI   C+      A+ V+   LS  C    V Y
Sbjct: 631 GMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALST-CGQKEVLY 689

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
             M   L       EA  +      LE +     F Y  ++  LC  S   H+  LL   
Sbjct: 690 CLMCTELSTYARWIEAKNILET--ALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLF 747

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           + +G   D  T    + AL E     +   D L+E
Sbjct: 748 IAKGYSFDPATFMPVIDALSES--GKKHDADMLSE 780



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 129/568 (22%), Positives = 227/568 (39%), Gaps = 105/568 (18%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P T  +N ++    R   +D    L++++ +    PD++T   L++ L    R+D A  +
Sbjct: 106 PPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRV 165

Query: 250 LDEMQVDGCFPTP---------------------------VTFNVLINGLCKNGELGRAA 282
            D M     F +                            V  N ++ G C+ G +  A 
Sbjct: 166 FDAMPARNEFSSGILARGYCRAGRSADALAVLDAMPEMNLVVCNTVVAGFCREGRVDEAE 225

Query: 283 KLVDNMFLKGCLPN---------------------------------------EVTYNTL 303
           +LVD M  +G  PN                                       +VT++ +
Sbjct: 226 RLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVM 285

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           + G C  G +D+A  L+D M     +    +Y   ++GLVK GR  +   +L  M     
Sbjct: 286 LSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGV 345

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N Y Y+ ++ GL KEGKA D  ++   +      P+ V Y++L+   C  G    A  
Sbjct: 346 QPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANR 405

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           IL EM   GCA N FTY+ L++   ++G+  +   + + M++     +    +++I GLC
Sbjct: 406 ILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLC 465

Query: 484 EDGKLR-----------EARMVWTQM------------LSRGCKPDVVAYSSMIHGLCNA 520
            + KL            E R+   ++            +S+ C PD + YS++++ LC  
Sbjct: 466 RNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKE 525

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           G  +EA K   EM+  +    PD   Y+  ++  C     S +I +L  M  R C+P   
Sbjct: 526 GRFDEAKKKLVEMIGKD--ISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTR 583

Query: 581 TCNIFLTALKEKL----------EAPQDGTD----FLNELAIRLFKRQRTSGGFKIVEVM 626
           + N+ +   +EK           E  + G        N L      R   +    +++ M
Sbjct: 584 SYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEM 643

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
           LQ  + P  +++  +++  C+     AA
Sbjct: 644 LQNEIVPNVTSFGLLIKAFCKTADFSAA 671



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 189/401 (47%), Gaps = 36/401 (8%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           PTPV +N L+    +   L     L  ++ L G  P+  T N L+  L   G +D A  +
Sbjct: 107 PTPV-YNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRV 165

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            D M A     NE + G +  G  + GR+ D   VL +M E    +N  + +T+++G  +
Sbjct: 166 FDAMPAR----NEFSSGILARGYCRAGRSADALAVLDAMPE----MNLVVCNTVVAGFCR 217

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM---INNGCA-A 435
           EG+ ++A +L  +M  +G  PN V ++  I  LC+ G+  EA  I  +M      G    
Sbjct: 218 EGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRP 277

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  T+  ++ GF ++G   +A  +   M     +     Y+  + GL ++G++ EA+ + 
Sbjct: 278 DQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELL 337

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
           ++M   G +P+   Y+ ++ GLC  G   +  ++  E         PDV TY  LL+A C
Sbjct: 338 SEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRV--EDFVRSGVMTPDVVTYTSLLHAYC 395

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
            + N + +  +L+ M  +GC P+L T N+ L +L                      K  R
Sbjct: 396 SKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSL---------------------LKAGR 434

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           T+   +++E M +K  S  T++   ++  LCR  +++ A++
Sbjct: 435 TTEVERLLERMSEKGYSLDTASCNIIIDGLCRNSKLEMAMD 475



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 175/399 (43%), Gaps = 36/399 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  Y + G+  +   +L  M ++       ++  + ++  KA    E  RL   M
Sbjct: 386 TYTSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERM 445

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI---------------- 188
            ++ +   T  S N +++ + +      A++  + + N   + +                
Sbjct: 446 SEKGYSLDTA-SCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSI 504

Query: 189 ----LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
               LP+ +T++ ++  +C+ G  D A +   EM  ++  PD   Y T + G C   +  
Sbjct: 505 SKSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTS 564

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            A+ +L +M+   C P+  ++N+LI G  +  +     KL+  M  KG   N +TYN+LI
Sbjct: 565 LAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLI 624

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
              C +G ++KA+ LLD M+ ++ +PN  ++G +I    K            S  +R F 
Sbjct: 625 KSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTAD--------FSAAQRVFD 676

Query: 365 V-------NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           V        E +Y  + + L    +  +A  + +  +E      +  Y  +I GLC V +
Sbjct: 677 VALSTCGQKEVLYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSE 736

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
            D A  +L   I  G + +  T+  ++    ESGK H A
Sbjct: 737 ADHAHSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDA 775



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 134/285 (47%), Gaps = 9/285 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++++++N + +EG +  A      +V     +I P+++ ++  I   C  G    AI++ 
Sbjct: 514 TYSTLMNALCKEGRFDEA---KKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVL 570

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R+M  R+C P   +Y  L+ G  ++ + DE + L+ EM+  G     +T+N LI   C  
Sbjct: 571 RDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGR 630

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G + +A  L+D M     +PN  ++  LI   C   +   A  + D +  S C   EV Y
Sbjct: 631 GMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFD-VALSTCGQKEVLY 689

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +   L    R ++   +L +  E +  +  + Y  +I+GL    +A+ A  L K  + 
Sbjct: 690 CLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLFIA 749

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI-----NNGCAA 435
           KG   +   +  +ID L   GK  +A+ +  +M+     N+G +A
Sbjct: 750 KGYSFDPATFMPVIDALSESGKKHDADMLSEKMMEIADCNDGQSA 794



 Score = 79.0 bits (193), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 121/284 (42%), Gaps = 58/284 (20%)

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM------------ 444
           G  P T VY+ L+    R  + D  E +  +++  G   + FT ++L+            
Sbjct: 103 GAAPPTPVYNRLLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLA 162

Query: 445 -------------------KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
                              +G+  +G+   A+ +   M + N V   VC +V + G C +
Sbjct: 163 RRVFDAMPARNEFSSGILARGYCRAGRSADALAVLDAMPEMNLV---VCNTV-VAGFCRE 218

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCLEPKSQPD 543
           G++ EA  +  +M ++G  P+VV ++  I  LC AG V EA ++FN+M     +   +PD
Sbjct: 219 GRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPD 278

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
             T++++L+  C    +  +  L+          D++ C  FL     K+E+        
Sbjct: 279 QVTFDVMLSGFCDAGMVDEATVLV----------DIMRCGGFL----RKVES-------Y 317

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
           N     L K  R     +++  M  + + P + T+  +V  LC+
Sbjct: 318 NRWLSGLVKNGRVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCK 361


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 139/465 (29%), Positives = 219/465 (47%), Gaps = 7/465 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  A+ ++ L E+A+  F+ M+       +  +FN++L ++I+   + +A   +N     
Sbjct: 101 IINAHVRSQLPEQALFYFNQMIGRGLVPGS-NTFNNLLILLIKSNFFEKAWRVFNETKG- 158

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
              N+  +  +F ++IK  C +G +D   ++  +M      P++  Y TL+DG CK   +
Sbjct: 159 ---NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDI 215

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +    L  +M          T+ VLING  K G      +L + M L G +PN  TYN++
Sbjct: 216 ERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSM 275

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I   C  G L+ A  L D M       N VTY T+I GL +  R ++  R++  M+    
Sbjct: 276 ICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGL 335

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   Y+TLI G    G  + A  L+ QM   G  P+   Y+ LI G           +
Sbjct: 336 SPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD 395

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++ EM   G + +  TY+ LM     S    KA +I+  M K   V +   Y VLIHGLC
Sbjct: 396 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 455

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
             G ++EA  ++  +     KP+ V Y++MI+G C  GS   AL+L  EM   E    P+
Sbjct: 456 VVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM--GENGMVPN 513

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           V +YN  +  LCK    + +  LL  M++ G  P +   N+   A
Sbjct: 514 VASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 558



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 180/366 (49%), Gaps = 4/366 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + +LI     +GD +  + + Y+M     V  + ++  +   + K  L ++ I L+  M
Sbjct: 201 VYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM 260

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    V ++NS++     +G  + A E ++ +   +   +  N +T+N +I  +C+
Sbjct: 261 -KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM---RERGVACNVVTYNTLIGGLCQ 316

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V  A +L   M      P++ +Y TL+DG C    LD+A  L ++M+  G  P+  T
Sbjct: 317 ERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLAT 376

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N+LI G  +         +V  M  +G  P++VTY  L+  L    N++KA  +   M 
Sbjct: 377 YNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSME 436

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +  + +   YG +I+GL  +G   + +++  S++E     N+ IY+T+I G  KEG + 
Sbjct: 437 KAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSY 496

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A++L K+M E G  PN   Y++ I  LC+  K  EAE +L +MI  G   +   ++ + 
Sbjct: 497 RALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMIS 556

Query: 445 KGFFES 450
           K  F++
Sbjct: 557 KARFDN 562



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 156/343 (45%), Gaps = 28/343 (8%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS-- 371
           ++A+   ++M+    +P   T+  ++  L+K        RV     E K +V   +YS  
Sbjct: 112 EQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF---NETKGNVKLDVYSFG 168

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +I G  + G  +   ++  QM E G  PN VVY+ LIDG C+ G  +  +++ ++M   
Sbjct: 169 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 228

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
              AN +TY+ L+ GFF+ G     +E+++ M     V N   Y+ +I   C DGKL  A
Sbjct: 229 DVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA 288

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++ +M  RG   +VV Y+++I GLC    V EA +L   M        P++ +YN L+
Sbjct: 289 FELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK--RDGLSPNLISYNTLI 346

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           +  C   N+  +  L N M   G  P L T NI +    E                    
Sbjct: 347 DGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEA------------------- 387

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + ++G   +V  M  + LSP   T+  ++  L R   I+ A
Sbjct: 388 --KNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKA 428


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 164/645 (25%), Positives = 285/645 (44%), Gaps = 96/645 (14%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           SL++  A    F  +E +L  M+ +      ++  F+  AY  + LV  A+ L+H   D 
Sbjct: 104 SLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYDI 163

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
            +    V + N++LN +IQ+     A + Y  +V     +   +  +  ++++ +C+   
Sbjct: 164 HNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKR---DGCWDNYSVCIMVRGLCKERK 220

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V+   +L  +   + C P+I  Y TL+DG  K   ++ A  L  E+++ G  PT  T+ +
Sbjct: 221 VEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGI 280

Query: 268 LINGLCK------------------------------NGELGRAAKLVDNMFLK-----G 292
           +INGLCK                              + ++    K+     L+     G
Sbjct: 281 MINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENG 340

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C P+  TYNTLI G C  G + +A  LL+  +     PN+++Y  +I+   K G+ +   
Sbjct: 341 CEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAF 400

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            + + M E+   ++   Y  L+ GL   G+ + A+ +  +M+E+G  P+  VY+ L++GL
Sbjct: 401 DLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGL 460

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI------------- 459
           C+ G+   A+ +L EM++   + +AF  ++L+ GF   GK  +A ++             
Sbjct: 461 CKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGV 520

Query: 460 --WKDMAKNNCVY--------------------NEVCYSVLIHGLCEDGKLREARMVWTQ 497
             +  M K  C +                    +E  YS +I G  +   L  A  ++ Q
Sbjct: 521 VGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQ 580

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M+ + CKP+VV Y+S+I+G C  G    A K F EM       +P+V TY IL+   CK+
Sbjct: 581 MVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEM--RSSGLKPNVVTYTILIGCFCKE 638

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
             IS +      M+   C P+ VT N  +  L              N LA  +  +   S
Sbjct: 639 GKISKACSFFELMLLNRCIPNDVTFNYLINGLT-------------NNLATAVSNKANES 685

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQE-------LCRPKRIQAAI 655
              K   +M+  F +  +  WE+ V         LC  K + AA+
Sbjct: 686 LEIK-ASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAAL 729



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 256/552 (46%), Gaps = 68/552 (12%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T ++ + V+   +  GL +RALE Y HI    H N LP+ +  N ++  + +   V+ A 
Sbjct: 133 TREALSFVVGAYVDSGLVNRALELY-HIAYDIH-NYLPDVIACNALLNALIQQKKVEIAR 190

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +++ EM  R+   D Y+ C ++ GLCKE +++E   L+++    GC P  V +N L++G 
Sbjct: 191 KVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGY 250

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            K G++ RA  L   + +KG LP   TY  +I+GLC K N      LL  M       N 
Sbjct: 251 WKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNV 310

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y +I++  +K G  ++  + L  + E     +   Y+TLISG  ++GK  +A +L + 
Sbjct: 311 QVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEH 370

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
            +++G  PN + Y+ LI   C+ GK   A ++   M   G   +   Y +L+ G   +G+
Sbjct: 371 AIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGE 430

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML------------- 499
              A+ +   M +   + +   Y+VL++GLC+ G+L  A+++  +ML             
Sbjct: 431 VDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSAT 490

Query: 500 ----------------------SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
                                 ++G  P VV Y++MI G C  G + +AL     M   +
Sbjct: 491 LVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRM--KD 548

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               PD FTY+ +++   KQ+++ +++ L   M+ + C P++VT    +       ++ +
Sbjct: 549 GDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSR 608

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA--- 654
                    A + F+  R+SG            L P   T+  ++   C+  +I  A   
Sbjct: 609 ---------AEKTFEEMRSSG------------LKPNVVTYTILIGCFCKEGKISKACSF 647

Query: 655 -----INKCWSN 661
                +N+C  N
Sbjct: 648 FELMLLNRCIPN 659



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 231/488 (47%), Gaps = 26/488 (5%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V  K   +  N   +N ++    + G      +  R +    CEPDI TY TL+ G C+
Sbjct: 298 LVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCR 357

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
           + ++ EA  LL+     G  P  +++  LI+  CK G+  RA  L   M  KG   + V 
Sbjct: 358 DGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVA 417

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y  L+HGL   G +D A+++ D+MV    +P+   Y  ++NGL K GR      +L+ M 
Sbjct: 418 YGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEML 477

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
            +   ++ ++ +TL+ G  + GK ++A KL++  + KG  P  V Y+A+I G C+ G  +
Sbjct: 478 HQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMN 537

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           +A   +  M +   + + FTYS+++ G+ +    H A++++  M K  C  N V Y+ LI
Sbjct: 538 DALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLI 597

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +G C  G    A   + +M S G KP+VV Y+ +I   C  G + +A   F  ML    +
Sbjct: 598 NGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLL--NR 655

Query: 540 SQPDVFTYNILLNALCK------QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
             P+  T+N L+N L         +  + S+++  S+M           + F T + +  
Sbjct: 656 CIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLM----------MDFFRTMISDGW 705

Query: 594 EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
           E         N + I L   +  +   ++ + M  K + P   ++  +V  LC   R   
Sbjct: 706 EQRVAA---YNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGR--- 759

Query: 654 AINKCWSN 661
             +K W N
Sbjct: 760 --SKEWKN 765



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 166/336 (49%), Gaps = 19/336 (5%)

Query: 144 MVDEFHCKRTVKSFNS--VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           +V+  H   ++ +F S  +++  I+ G    A + +   + AK M+  P  + +N +IK 
Sbjct: 473 LVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTI-AKGMD--PGVVGYNAMIKG 529

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+ G++++A+   + M   +  PD +TY T++DG  K+N L  A+ L  +M    C P 
Sbjct: 530 YCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPN 589

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VT+  LING C+ G+  RA K  + M   G  PN VTY  LI   C +G + KA S  +
Sbjct: 590 VVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFE 649

Query: 322 RMVASKCMPNEVTYGTIINGLVK-LGRAVDG---------ARVLM----SMEERKFHVNE 367
            M+ ++C+PN+VT+  +INGL   L  AV           A ++M    +M    +    
Sbjct: 650 LMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRV 709

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y++++  L        A++L  +M  KG  P+ V ++AL+ GLC  G+  E +  +  
Sbjct: 710 AAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTISC 769

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            +N      A  YS  +  F   G   +A +++  +
Sbjct: 770 KLNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTL 805



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 19/301 (6%)

Query: 82  GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           G   + ++I+ Y   G        + RM+       E ++  I   Y K + +  A++LF
Sbjct: 519 GVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLF 578

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             MV +  CK  V ++ S++N   + G   RA + +  +   +   + PN +T+ ++I  
Sbjct: 579 GQMVKQ-KCKPNVVTYTSLINGFCRTGDSSRAEKTFEEM---RSSGLKPNVVTYTILIGC 634

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK------ENRLDE-----AVLLL 250
            C+ G +  A   F  M +  C P+  T+  L++GL         N+ +E     A L++
Sbjct: 635 FCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESLEIKASLMM 694

Query: 251 D---EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           D    M  DG       +N ++  LC +  +  A +L D M  KG  P+ V++  L++GL
Sbjct: 695 DFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAALQLRDKMTGKGIFPDPVSFAALVYGL 754

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVN 366
           CL+G   +  + +   +    +   V Y   +N  +  G   + ++V  + +E  K H+ 
Sbjct: 755 CLEGRSKEWKNTISCKLNEWELQIAVKYSQKLNPFLPKGLTSEASKVFHTLLEGVKLHIQ 814

Query: 367 E 367
           E
Sbjct: 815 E 815


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 224/409 (54%), Gaps = 7/409 (1%)

Query: 167 EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
           +G  H+AL+F++ +V    +    N +++  +I  +C++G    A+QL R +  +  +P+
Sbjct: 155 KGQIHQALQFHDKVV---ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 211

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
           +  Y T++D +CK   ++EA  L  EM   G  P  VT+N LI+G C  G++  A  L +
Sbjct: 212 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFN 271

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M  +   PN  T+N L+ G C +  L +A ++L  M+     P+  TY ++++    + 
Sbjct: 272 KMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVK 331

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
                  +  ++ +R  + N + YS +I G  K  K ++AM L+K+M      P+ V Y+
Sbjct: 332 EVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYN 391

Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           +LIDGLC++GK   A +++ EM + G   +  TY+S++    ++ +  KA+ +   M K+
Sbjct: 392 SLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKM-KD 450

Query: 467 NCVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
             +  ++C Y+ L+ GLC++G+L +AR+V+  +L +G   DV  Y++MI G C+ G  +E
Sbjct: 451 EGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDE 510

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +L L ++M   E    P+  TY I++ +L  +     +  LL  M+ RG
Sbjct: 511 SLDLLSKM--EENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 216/433 (49%), Gaps = 15/433 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T   +IK +C  G +  A+Q   ++       +  +Y TL++GLCK  +   A+ L
Sbjct: 140 PNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQL 199

Query: 250 LDEMQVDGCF--PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           L   +VDG    P  V +N +I+ +CK   +  A  L   M  KG  P+ VTYN LI G 
Sbjct: 200 L--RRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGF 257

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C+ G +  A  L ++M+     PN  T+  +++G  K  R  +   VL  M ++    + 
Sbjct: 258 CIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDV 317

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + Y++L+       +   A  ++  + ++G  PN   YS +I G C++ K DEA  +  E
Sbjct: 318 FTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKE 377

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M  N    +  TY+SL+ G  + GK   A+++  +M      ++++ Y+ ++  LC++ +
Sbjct: 378 MHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQ 437

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + +A  + T+M   G +PD+  Y++++ GLC  G +E+A  +F ++L        DV  Y
Sbjct: 438 VDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLV--KGYILDVNIY 495

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
             ++   C       S+DLL+ M + GC P+ VT  I + +L +K E         N+ A
Sbjct: 496 TAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDE---------NDKA 546

Query: 608 IRLFKRQRTSGGF 620
            +L +   T G F
Sbjct: 547 EKLLREMITRGLF 559



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 211/440 (47%), Gaps = 58/440 (13%)

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R +  +N +P I+ +  ++  L K N     V L  +M+ +G     V  ++LIN   + 
Sbjct: 61  RLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQL 120

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+   +  ++  +   G  PN +T  TLI GLCLKG + +A+   D+             
Sbjct: 121 GQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDK------------- 167

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
                 +V LG                FH+N+  Y TLI+GL K G+   A++L +++  
Sbjct: 168 ------VVALG----------------FHLNKVSYGTLINGLCKVGQTSAALQLLRRVDG 205

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K  +PN V+Y+ +ID +C+V   +EA ++  EM++ G + +  TY++L+ GF   GK   
Sbjct: 206 KLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKD 265

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A +++  M   N   N   +++L+ G C++ +L+EA+ V   M+ +G KPDV  Y+S++ 
Sbjct: 266 ATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMD 325

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
             C    V +A  +FN +   +    P++ +Y+I+++  CK   +  +++L   M     
Sbjct: 326 RYCLVKEVNKAKHIFNTIS--QRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI 383

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            PD+VT N  +           DG          L K  + S   K+V+ M  + +    
Sbjct: 384 IPDVVTYNSLI-----------DG----------LCKLGKISYALKLVDEMHDRGVPHDK 422

Query: 636 STWERVVQELCRPKRIQAAI 655
            T+  ++  LC+  ++  AI
Sbjct: 423 ITYNSILDALCKNHQVDKAI 442



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/341 (24%), Positives = 164/341 (48%), Gaps = 24/341 (7%)

Query: 317 VSLLDRMVASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           VS  +R++  K   P+   +G I+  LVK         +   ME      +  I S LI+
Sbjct: 56  VSSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILIN 115

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
              + G+   +  +  ++++ G +PN +  + LI GLC  G+  +A +   +++  G   
Sbjct: 116 CFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHL 175

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  +Y +L+ G  + G+   A+++ + +       N V Y+ +I  +C+   + EA  ++
Sbjct: 176 NKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 235

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
           ++M+S+G  PDVV Y+++I G C  G +++A  LFN+M+       P+V+T+NIL++  C
Sbjct: 236 SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIF--ENINPNVYTFNILVDGFC 293

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR 615
           K+  +  + ++L  MM +G  PD+ T                      N L  R    + 
Sbjct: 294 KERRLKEAKNVLAMMMKQGIKPDVFT---------------------YNSLMDRYCLVKE 332

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            +    I   + Q+ ++P   ++  ++   C+ K++  A+N
Sbjct: 333 VNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMN 373


>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
 gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 234/452 (51%), Gaps = 45/452 (9%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + +AYG +   + AI  FH  V E    + + S+N++L V+++    + A  F++ IVN 
Sbjct: 135 LIRAYGYSGDTKSAIFWFHK-VKEIQQGKCLFSWNAILGVLVKVNQINVAKSFFDQIVN- 192

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
               + P+  T+  +I+  C++G++DNA ++F EM    CEP++ T  TL++G CK+  +
Sbjct: 193 -DAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEMI---CEPNLITCNTLINGYCKKGDM 248

Query: 244 DEA-VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           + A + L   M+   C P  VT++ LI+G CK GEL  A K +D M ++GC PN  TYN 
Sbjct: 249 ENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNA 308

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I+GLCL+GN+D+A  LL +M  +    N  T+ +I+ GL                    
Sbjct: 309 IIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSILKGLS------------------- 349

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
                             GK+E+A+  + +M+ KG K +   +  +I   C++ KPDEA 
Sbjct: 350 ----------------VAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAI 393

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +L EM   G + +  +++++++   E G+  KAV + K +    C+ N V YS +I GL
Sbjct: 394 SLLKEMQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGL 453

Query: 483 CED-GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           C   G+++E   +   ML  G + D   YS ++ G C AG+ E A++ F +   +     
Sbjct: 454 CRSHGRMQEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYD--SINKNYV 511

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
            ++ +++  +N +C +  +  +  +   M  R
Sbjct: 512 INLQSFSFFVNLMCGKGKVIEAEQIFKDMCRR 543



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 170/372 (45%), Gaps = 42/372 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  + + + K  +++ A ++F    DE  C+  + + N+++N   ++G    A  F   
Sbjct: 202 TYTTMIRGFCKVGMIDNARKVF----DEMICEPNLITCNTLINGYCKKGDMENARIFLCR 257

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           ++ +K  + LP+T+T++ +I   C+ G ++ A +    M +R C P+++TY  ++ GLC 
Sbjct: 258 MMESK--DCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCL 315

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTF---------------------------------- 265
              +DEA  LL +M+++G      T                                   
Sbjct: 316 RGNVDEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKE 375

Query: 266 -NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
             V+I   CK  +   A  L+  M  KG   +  ++N ++  L   G LDKAV LL ++ 
Sbjct: 376 HEVVITAYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQVK 435

Query: 325 ASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              C+PN V+Y T+I GL +  GR  + A ++  M +  F ++  +YS L+ G  + G  
Sbjct: 436 NMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNE 495

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E AM+ +   + K    N   +S  ++ +C  GK  EAE+I  +M       +  +Y  +
Sbjct: 496 EMAMRAFYDSINKNYVINLQSFSFFVNLMCGKGKVIEAEQIFKDMCRRCSLVDVDSYQRV 555

Query: 444 MKGFFESGKGHK 455
           +        G +
Sbjct: 556 LDDQLHKHSGRR 567



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 147/294 (50%), Gaps = 9/294 (3%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCM-PNEVTYGTIINGLVKLGRAVDGARVLMS 357
           ++N ++  L     ++ A S  D++V    + P+  TY T+I G  K+G  +D AR +  
Sbjct: 166 SWNAILGVLVKVNQINVAKSFFDQIVNDAVVKPDASTYTTMIRGFCKVG-MIDNARKVF- 223

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME-KGCKPNTVVYSALIDGLCRVG 416
            +E     N    +TLI+G  K+G  E+A     +MME K C P+TV YS LIDG C+ G
Sbjct: 224 -DEMICEPNLITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKG 282

Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
           + +EA + +  M+  GC  N +TY++++ G    G   +A  +   M  N    N   + 
Sbjct: 283 ELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHL 342

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
            ++ GL   GK  EA   +++M+ +G K D   +  +I   C     +EA+ L  EM   
Sbjct: 343 SILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKEM--- 399

Query: 537 EPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + K     V ++N +L  L +   +  ++ LL  + + GC P+LV+ +  +  L
Sbjct: 400 QAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGL 453



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 116/223 (52%), Gaps = 6/223 (2%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+T+I G  K G  ++A K++ +M+   C+PN +  + LI+G C+ G  + A   L  M+
Sbjct: 203 YTTMIRGFCKVGMIDNARKVFDEMI---CEPNLITCNTLINGYCKKGDMENARIFLCRMM 259

Query: 430 -NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            +  C  +  TYS+L+ G+ + G+ ++A +    M    C  N   Y+ +I+GLC  G +
Sbjct: 260 ESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNV 319

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EAR + T+M   G K +V  + S++ GL  AG  EEA+  F+EM  +    + D   + 
Sbjct: 320 DEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEM--IRKGMKLDAKEHE 377

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           +++ A CK      +I LL  M  +G    + + N  L  L E
Sbjct: 378 VVITAYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRILVE 420



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 103/212 (48%), Gaps = 36/212 (16%)

Query: 441 SSLMKGFFESGKGHKAVEIW----KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
           S L++ +  SG    A+  W    K++ +  C+++   ++ ++  L +  ++  A+  + 
Sbjct: 133 SKLIRAYGYSGDTKSAI-FWFHKVKEIQQGKCLFS---WNAILGVLVKVNQINVAKSFFD 188

Query: 497 QMLSRGC-KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
           Q+++    KPD   Y++MI G C  G ++ A K+F+EM+C     +P++ T N L+N  C
Sbjct: 189 QIVNDAVVKPDASTYTTMIRGFCKVGMIDNARKVFDEMIC-----EPNLITCNTLINGYC 243

Query: 556 KQSNISHSIDLLNSMMD-RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
           K+ ++ ++   L  MM+ + C PD VT +  +    +K E        LNE         
Sbjct: 244 KKGDMENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGE--------LNE--------- 286

Query: 615 RTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                 K ++ ML +  +P   T+  ++  LC
Sbjct: 287 ----ARKWMDGMLIRGCNPNLWTYNAIIYGLC 314


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/434 (30%), Positives = 223/434 (51%), Gaps = 4/434 (0%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           ++A  LF  M   +     V+ FN VL  I +  +Y   +  +  I NA+ + I P+  T
Sbjct: 67  DDAFHLFVLMAYSYPLPSIVE-FNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYT 125

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N+++   CR     +A+    +M     EPDI T  +L++G C  N + +AV +  +M+
Sbjct: 126 CNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME 185

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G     V   +LI+ LCKN  +  A +++  M  +G  PN VTY++LI GLC  G L 
Sbjct: 186 KMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLA 245

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
            A   L  M + K  PN +T+  +I+   K G+      V   M +     N + YS+LI
Sbjct: 246 DAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI 305

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            GL    + ++A+K+   M+ KGC PN V YS L +G  +  + D+  ++L +M   G A
Sbjct: 306 YGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVA 365

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
           AN  + ++L+KG+F++GK   A+ ++  M  N  + N   Y++++ GL  +G++ +A   
Sbjct: 366 ANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSR 425

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           +  M       D++ Y+ MIHG+C A  V+EA  LF ++     + +PD   Y I++  L
Sbjct: 426 FEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKF--KRVEPDFKAYTIMIAEL 483

Query: 555 CKQSNISHSIDLLN 568
             ++ +    D LN
Sbjct: 484 -NRAGMRTEADALN 496



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 156/346 (45%), Gaps = 26/346 (7%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR---AVDGARVLMSMEERKFHVNEYI 369
            D A  L   M  S  +P+ V +  ++  + K+      ++  + + + E  +   + Y 
Sbjct: 66  FDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYT 125

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            + L++   +  +   A+    +MM+ G +P+ V  S+L++G C      +A  +  +M 
Sbjct: 126 CNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME 185

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +    + L+    ++     A+E+ K M       N V YS LI GLC+ G+L 
Sbjct: 186 KMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLA 245

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A     +M S+   P+V+ +S++I      G + +   ++  M+  +    P+VFTY+ 
Sbjct: 246 DAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI--QMSIDPNVFTYSS 303

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+  LC  + +  +I +L+ M+ +GC P++VT                      + LA  
Sbjct: 304 LIYGLCMHNRVDEAIKMLDLMISKGCTPNVVT---------------------YSTLANG 342

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            FK  R   G K+++ M Q+ ++  T +   +++   +  +I  A+
Sbjct: 343 FFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 388


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 224/468 (47%), Gaps = 3/468 (0%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + K + +A   +EA+ +      E  C   V S+N +L  +  +G   +A +    +   
Sbjct: 154 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG 213

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
             +   P+ + +N VI    + G V+ A  LF+EM  R   PD+ TY +++  LCK   +
Sbjct: 214 GTV-CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAM 272

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D+A   L +M   G  P   T+N LI G    G+   A ++   M  +  LP+ V  NTL
Sbjct: 273 DKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTL 332

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +  LC  G + +A  + D M      P+  +Y  ++NG    G  VD   +   M     
Sbjct: 333 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGI 392

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
                 ++ LI      G  + AM ++ +M + G KP+ V Y  +I  LCR+GK D+A E
Sbjct: 393 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAME 452

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
              +MI+ G   + + Y  L++GF   G   KA E+  ++  N    + V +  +I+ LC
Sbjct: 453 KFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLC 512

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G++ +A+ ++   ++ G  PD V Y+ ++ G C  G +E+AL++F+ M  +    +P+
Sbjct: 513 KLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAM--VSAGIEPN 570

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           V  Y  L+N  CK   I   + L   M+ +G  P  +  NI +  L E
Sbjct: 571 VVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 618



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 243/491 (49%), Gaps = 41/491 (8%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++      G +  A+  +  +   +  +ILP+ +  N ++ ++C+ G +  A  +F
Sbjct: 293 TYNNLIYGYSSTGQWKEAVRVFKEM---RRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 216 REMPVRNCEPDIYTYCTLMDG-------------------------LCKEN--------- 241
             M ++   PD+++Y  +++G                         +C  N         
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 409

Query: 242 -RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             LD+A+++ +EM+  G  P  VT+  +I  LC+ G++  A +  + M  +G +P++  Y
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           + LI G C  G+L KA  L+  ++ +    + V +G+IIN L KLGR +D   +      
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
              H +  +Y+ L+ G    GK E A++++  M+  G +PN V Y  L++G C++G+ DE
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
              +  EM+  G   +   Y+ ++ G FE+G+   A   + +M ++    N+  YS+++ 
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           GL ++    EA  ++ ++ +   K D++  ++MI G+     VEEA  LF  +       
Sbjct: 650 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS--RSGL 707

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P   TY+I++  L K+  +  + D+ +SM + GC+PD    N  +  L +K E  + G 
Sbjct: 708 VPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 767

Query: 601 DFLNELAIRLF 611
            +L+++  R F
Sbjct: 768 -YLSKIDERNF 777



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 135/492 (27%), Positives = 248/492 (50%), Gaps = 12/492 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREK---RVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI  Y+++G +K    V   MRR+     VV   + +     YGK   ++EA  +F
Sbjct: 293 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGK---IKEARDVF 349

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            TM  +      V S+  +LN    +G      + ++ ++      I P   TFN++IK 
Sbjct: 350 DTMAMKGQ-NPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD---GIAPVICTFNVLIKA 405

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
               G++D A+ +F EM     +P + TY T++  LC+  ++D+A+   ++M   G  P 
Sbjct: 406 YANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPD 465

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
              ++ LI G C +G L +A +L+  +   G   + V + ++I+ LC  G +  A ++ D
Sbjct: 466 KYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD 525

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             V     P+ V Y  +++G   +G+     RV  +M       N   Y TL++G  K G
Sbjct: 526 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 585

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + ++ + L+++M++KG KP+T++Y+ +IDGL   G+   A+    EM  +G A N  TYS
Sbjct: 586 RIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYS 645

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            +++G F++    +A+ ++K++   N   + +  + +I G+ +  ++ EA+ ++  +   
Sbjct: 646 IVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G  P  V YS MI  L   G VEEA  +F+ M       +PD    N ++  L K++ I 
Sbjct: 706 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPDSRLLNHVVRELLKKNEIV 763

Query: 562 HSIDLLNSMMDR 573
            +   L+ + +R
Sbjct: 764 RAGAYLSKIDER 775



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 251/546 (45%), Gaps = 15/546 (2%)

Query: 59  AKSEQPFSDEIFNSTPKLGSYQLGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVL 117
           AK      D + + TP+LG   + D   Y+ L++   N G     + +L RM  E   V 
Sbjct: 161 AKRTDEALDILLHRTPELGC--VPDVFSYNILLKSLCNQGKSGQADDLL-RMMAEGGTVC 217

Query: 118 EKSFIF---IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
               +    +   + K   V +A  LF  MV        + +++SV++ + +     +A 
Sbjct: 218 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDLVTYSSVVHALCKARAMDKAE 276

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
            F   +VN     +LP+  T+N +I      G    A+++F+EM  ++  PD+    TLM
Sbjct: 277 AFLRQMVNK---GVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLM 333

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             LCK  ++ EA  + D M + G  P   ++ +++NG    G L     L D M   G  
Sbjct: 334 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIA 393

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P   T+N LI      G LDKA+ + + M      P+ VTY T+I  L ++G+  D    
Sbjct: 394 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M ++    ++Y Y  LI G    G    A +L  ++M  G + + V + ++I+ LC+
Sbjct: 454 FNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +G+  +A+ I    +N G   +A  Y+ LM G+   GK  KA+ ++  M       N V 
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y  L++G C+ G++ E   ++ +ML +G KP  + Y+ +I GL  AG    A   F+EM 
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM- 632

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEK 592
             E     +  TY+I+L  L K      +I L   +       D++T N  +  +    +
Sbjct: 633 -TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 691

Query: 593 LEAPQD 598
           +E  +D
Sbjct: 692 VEEAKD 697



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 215/472 (45%), Gaps = 25/472 (5%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN--CEPDIYTYCTLMDGLCKENR 242
            +  +P+  ++N+++K++C  G    A  L R M      C PD+  Y T++DG  KE  
Sbjct: 177 ELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGD 236

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           +++A  L  EM   G  P  VT++ +++ LCK   + +A   +  M  KG LP+  TYN 
Sbjct: 237 VNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNN 296

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           LI+G    G   +AV +   M     +P+ V   T++  L K G+  +   V  +M  + 
Sbjct: 297 LIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKG 356

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
            + + + Y+ +++G   +G   D   L+  M+  G  P    ++ LI      G  D+A 
Sbjct: 357 QNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAM 416

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            I  EM ++G   +  TY +++      GK   A+E +  M     V ++  Y  LI G 
Sbjct: 417 IIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGF 476

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C  G L +A+ + +++++ G + D+V + S+I+ LC  G V +A  +F+  L +     P
Sbjct: 477 CTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFD--LTVNVGLHP 534

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
           D   YN+L++  C    +  ++ + ++M+  G +P++V     +                
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGY------------- 581

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    K  R   G  +   MLQK + P T  +  ++  L    R   A
Sbjct: 582 --------CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 203/396 (51%), Gaps = 9/396 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-L 248
           P + T+ +++    R    + A+  F ++       D      L+ G C+  R DEA+ +
Sbjct: 111 PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 170

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHG 306
           LL      GC P   ++N+L+  LC  G+ G+A  L+  M   G  C P+ V YNT+I G
Sbjct: 171 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDG 230

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSMEERKFHV 365
              +G+++KA  L   MV     P+ VTY ++++ L K  RA+D A   L  M  +    
Sbjct: 231 FFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK-ARAMDKAEAFLRQMVNKGVLP 289

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + Y+ LI G    G+ ++A++++K+M  +   P+ V  + L+  LC+ GK  EA ++ 
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIHGLCE 484
             M   G   + F+Y+ ++ G+   G      +++ D+   + +   +C ++VLI     
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLF-DLMLGDGIAPVICTFNVLIKAYAN 408

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G L +A +++ +M   G KP VV Y ++I  LC  G +++A++ FN+M  ++    PD 
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM--IDQGVVPDK 466

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           + Y+ L+   C   ++  + +L++ +M+ G   D+V
Sbjct: 467 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIV 502



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/406 (23%), Positives = 183/406 (45%), Gaps = 39/406 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + KAY    ++++A+ +F+ M D    K  V ++ +V+  + + G    A+E +N 
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPHVVTYMTVIAALCRIGKMDDAMEKFNQ 456

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++     ++P+   ++ +I+  C  G +  A +L  E+       DI  + ++++ LCK
Sbjct: 457 MID---QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCK 513

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R+ +A  + D     G  P  V +N+L++G C  G++ +A ++ D M   G  PN V 
Sbjct: 514 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 573

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y TL++G C  G +D+ +SL   M+     P+ + Y  II+GL + GR V        M 
Sbjct: 574 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMT 633

Query: 360 ERKFHVNEYIYS-----------------------------------TLISGLFKEGKAE 384
           E    +N+  YS                                   T+I+G+F+  + E
Sbjct: 634 ESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVE 693

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A  L+  +   G  P  V YS +I  L + G  +EAE++   M N GC  ++   + ++
Sbjct: 694 EAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVV 753

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +   +  +  +A      + + N     +   +L+      G  RE
Sbjct: 754 RELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCRE 799



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 147/349 (42%), Gaps = 54/349 (15%)

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R      Y Y+ L+    +  + E A+  + Q++  G + + ++ S L+ G C   + DE
Sbjct: 107 RVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDE 166

Query: 421 AEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN--CVYNEVCYSV 477
           A +IL       GC  + F+Y+ L+K     GK  +A ++ + MA+    C  + V Y+ 
Sbjct: 167 ALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNT 226

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA----------------- 520
           +I G  ++G + +A  ++ +M+ RG  PD+V YSS++H LC A                 
Sbjct: 227 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKG 286

Query: 521 ------------------GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
                             G  +EA+++F EM        PDV   N L+ +LCK   I  
Sbjct: 287 VLPDNWTYNNLIYGYSSTGQWKEAVRVFKEM--RRQSILPDVVALNTLMGSLCKYGKIKE 344

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAPQDGTDFLNELAIR--------LFK 612
           + D+ ++M  +G +PD+ +  I L     K  L    D  D +    I         L K
Sbjct: 345 ARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 404

Query: 613 RQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
                G       I   M    + P   T+  V+  LCR  ++  A+ K
Sbjct: 405 AYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEK 453


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 150/506 (29%), Positives = 244/506 (48%), Gaps = 44/506 (8%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           GK   ++EA+ LF  M        +VK F  +L VI++   Y  A+    HI ++  + I
Sbjct: 52  GKVKNIDEALDLFQGMA-SMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFSS--LGI 108

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEP----------------------- 225
             +T+T N+VI  +CRL LV     +   M     EP                       
Sbjct: 109 EADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVG 168

Query: 226 ------------DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
                       D+YTY  L++GLCK      AV  L +M+     P  V ++ +++GLC
Sbjct: 169 LVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLC 228

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K+G +  A  L   M  KG  PN VTY  LI GLC  G   +  SLLD M+      +  
Sbjct: 229 KDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQ 288

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           T   +++   K G+ +    V+  M       + + Y++LI     + K  +AM+++  M
Sbjct: 289 TLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLM 348

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           + +GC P+ VV+++LI G C+    ++   +L EM   G   +  T+++L+ GF ++G+ 
Sbjct: 349 VSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRP 408

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
             A E++ +M K   V N    +V++ GLC+   L EA  +   M       ++V YS +
Sbjct: 409 LAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSIL 468

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           + G+C+AG +  A +LF+ +    P    Q +V+TY I++  LCKQ ++  + DLL +M 
Sbjct: 469 LDGMCSAGKLNAAWELFSSL----PGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINME 524

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQ 597
           + GC PD  T N+F+  L  K E  +
Sbjct: 525 ENGCLPDNCTYNVFVQGLLTKKEIAR 550



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 218/437 (49%), Gaps = 5/437 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV +  +++N +  +G   +A+   +H+   + M    +  T+ ++I  +C+ G    A+
Sbjct: 146 TVMTLTALINGLCVQGNVAQAVGLVDHM---EKMRYPLDVYTYGVLINGLCKTGDTLAAV 202

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +  R+M  RN +P++  Y T+MDGLCK+  + EA+ L  EM   G  P  VT+  LI GL
Sbjct: 203 EWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGL 262

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C  G       L+D M   G   +  T N L+   C +G + +A S++  M+ +   P+ 
Sbjct: 263 CNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDV 322

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            TY ++I+      +  +  RV   M  R    +  ++++LI G  K+      M L ++
Sbjct: 323 FTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEE 382

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M + G  P+ V ++ LI G C+ G+P  A+E+   M   G   N  T + ++ G  +   
Sbjct: 383 MAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNL 442

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             +AV + + M K+N   N V YS+L+ G+C  GKL  A  +++ +  +G + +V  Y+ 
Sbjct: 443 LSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTI 502

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           MI GLC  GS+++A  L   M   E    PD  TYN+ +  L  +  I+ SI  L  M D
Sbjct: 503 MIKGLCKQGSLDKAEDLLINM--EENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRD 560

Query: 573 RGCDPDLVTCNIFLTAL 589
           +G   D  T  I +  L
Sbjct: 561 KGFSVDAATTEITINYL 577



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/403 (31%), Positives = 201/403 (49%), Gaps = 6/403 (1%)

Query: 191 NTLTFNLVIKTVCRLGLV---DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           N   F + ++ +C+ G V   D A+ LF+ M      P +  +  L+  + +      A+
Sbjct: 37  NGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAI 96

Query: 248 LLLDEMQVD-GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
            L+  +    G     +T N++IN LC+   +     ++  MF  G  P  +T   LI+G
Sbjct: 97  SLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALING 156

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           LC++GN+ +AV L+D M   +   +  TYG +INGL K G  +     L  MEER +  N
Sbjct: 157 LCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPN 216

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             +YST++ GL K+G   +A+ L  +M  KG +PN V Y+ LI GLC  G+  E   +L 
Sbjct: 217 VVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLD 276

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EMI  G   +  T + L+  F + GK  +A  +   M       +   Y+ LIH  C   
Sbjct: 277 EMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQN 336

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ EA  V+  M+SRGC PD+V ++S+IHG C   ++ + + L  EM   +    PDV T
Sbjct: 337 KMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEM--AKMGFVPDVVT 394

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           +  L+   C+      + +L  +M   G  P+L TC + L  L
Sbjct: 395 WTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGL 437



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 85/191 (44%), Gaps = 4/191 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +  +G   + + +   M +  +V   ++   I     K +L+ EA+ L   M
Sbjct: 394 TWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAM 453

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++ +    +  ++ +L+ +   G  + A E ++ +   K + I  N  T+ ++IK +C+
Sbjct: 454 -EKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSL-PGKGLQI--NVYTYTIMIKGLCK 509

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +D A  L   M    C PD  TY   + GL  +  +  ++  L  M+  G      T
Sbjct: 510 QGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAAT 569

Query: 265 FNVLINGLCKN 275
             + IN L  N
Sbjct: 570 TEITINYLSTN 580



 Score = 42.4 bits (98), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 41/206 (19%), Positives = 80/206 (38%), Gaps = 20/206 (9%)

Query: 471 NEVCYSVLIHGLCEDGKLR---EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
           N   + + +  LC+ GK++   EA  ++  M S    P V  ++ ++  +        A+
Sbjct: 37  NGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAI 96

Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
            L   +       + D  T NI++N LC+   ++    +L +M   G +P ++T    + 
Sbjct: 97  SLVKHIFS-SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALIN 155

Query: 588 AL---------------KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
            L                EK+  P D   +   L   L K   T    + +  M ++   
Sbjct: 156 GLCVQGNVAQAVGLVDHMEKMRYPLDVYTY-GVLINGLCKTGDTLAAVEWLRKMEERNWK 214

Query: 633 PQTSTWERVVQELCRPKRIQAAINKC 658
           P    +  ++  LC+   +  A+N C
Sbjct: 215 PNVVVYSTIMDGLCKDGLVSEALNLC 240


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 256/546 (46%), Gaps = 57/546 (10%)

Query: 134 VEEAIRLFHTMV--DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           V+ A+  +H MV    F C   VK FN +  ++ +   Y  A+    H+    ++ + PN
Sbjct: 59  VDVALDFYHKMVTMKPFPC---VKDFNLLFGIVAKMKHYTTAISLIKHM---SYIGVKPN 112

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             T N+VI  +CRL        +   M     EP I T+ T+++GLC E  + +A+  +D
Sbjct: 113 VPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVD 172

Query: 252 -----------------------------------EMQVDGCFPTPVTFNVLINGLCKNG 276
                                              +M+   C      +N +++GLCK+G
Sbjct: 173 HLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDG 232

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            +  A  L   M  KG  P+  TYN LIHGLC      +A  LL  M+    MP+  T+ 
Sbjct: 233 MVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFN 292

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            I    +K G       +   M       +   YS++I       + +DAM+++  M+ K
Sbjct: 293 VIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIRK 352

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           GC PN V Y++LI G C +   ++A   L EM+NNG   N  T+++L+ GF ++GK   A
Sbjct: 353 GCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKPVAA 412

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            E++  M K+  + +    ++++ GL +     EA  ++ ++       D++ YS +++G
Sbjct: 413 KELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNG 472

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           +C++G + +AL+LF+ +       + DV TYNI++N LCK+  +  + DLL  M + GC 
Sbjct: 473 MCSSGKLNDALELFSYL--SSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCP 530

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI-----------VEV 625
           PD  T N+F+  L  + E  +  T +L  +  + F+   T+    I            +V
Sbjct: 531 PDECTYNVFVQGLLRRYEISKS-TKYLMFMKGKGFRANATTTKLLINYFSANKENRAFQV 589

Query: 626 MLQKFL 631
            LQKF+
Sbjct: 590 FLQKFV 595



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 173/392 (44%), Gaps = 37/392 (9%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
            +D L     +D A+    +M     FP    FN+L   + K      A  L+ +M   G
Sbjct: 49  FLDSLRNVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIG 108

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN  T+N +I+ LC   +     S+L  M      P+ VT+ TI+NGL   G      
Sbjct: 109 VKPNVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAI 168

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           R +  +++  +  + Y    +I+GL K G +  A+   K+M E+ C  +   Y+A++DGL
Sbjct: 169 RFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGL 228

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG-------------------------- 446
           C+ G   EA ++  +M   G   + FTY+ L+ G                          
Sbjct: 229 CKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDV 288

Query: 447 ---------FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
                    F ++G   +A  I+  M      ++ V YS +I   C   ++++A  V+  
Sbjct: 289 QTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDL 348

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M+ +GC P++V Y+S+IHG C   ++ +A+    EM  +     P++ T+N L+   CK 
Sbjct: 349 MIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEM--VNNGLDPNIVTWNTLIGGFCKA 406

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
                + +L   M   G  PDL TC I L  L
Sbjct: 407 GKPVAAKELFFVMHKHGQLPDLQTCAIILDGL 438



 Score = 42.7 bits (99), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 23/145 (15%)

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +  +  L N  SV+ AL  +++M+ ++P   P V  +N+L   + K  + + +I L+  M
Sbjct: 47  AQFLDSLRNVKSVDVALDFYHKMVTMKP--FPCVKDFNLLFGIVAKMKHYTTAISLIKHM 104

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
              G  P++ T NI +  L                   RL     T  GF ++ +M +  
Sbjct: 105 SYIGVKPNVPTHNIVINCL------------------CRL---NHTVFGFSVLGLMFKIG 143

Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
           + P   T+  +V  LC    +  AI
Sbjct: 144 VEPSIVTFTTIVNGLCVEGNVAQAI 168


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 233/460 (50%), Gaps = 18/460 (3%)

Query: 158 NSVLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           N+ L++I++E    G   RAL ++        M + PN + F  +I+ +C+ G V  A +
Sbjct: 237 NATLSLIVREFCEKGFVTRALWYFRRFCE---MGLRPNLINFTCMIEGLCKRGSVKQAFE 293

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGL 272
           +  EM  R  +P++YT+  L+DGLCK+   ++A  L L  ++ +   P  +T+  +I+G 
Sbjct: 294 MLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGY 353

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C++ ++ RA  L+  M  +G  PN  TY TLI G C  GN ++A  L++ M      PN 
Sbjct: 354 CRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNV 413

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            TY  I++GL K GR  +  +VL S        ++  Y+ LIS   K+ + + A+ L+ +
Sbjct: 414 CTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNK 473

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M++ G +P+   Y+ LI   CR  +  E+E    E +  G      TY+S++ G+   G 
Sbjct: 474 MVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGN 533

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A++ +  M+ + C  + + Y  LI GLC+  KL EAR ++  M+ +G  P  V   +
Sbjct: 534 LRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVT 593

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           + +  C       A+ +      LE K    V T N L+  LC +  +  +    + ++D
Sbjct: 594 LAYEYCKIDDGCSAMVVLER---LEKKLW--VRTVNTLVRKLCSERKVGMAALFFHKLLD 648

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
           +  + + VT   F+TA  E      +  D +++L+ R++K
Sbjct: 649 KDPNVNRVTIAAFMTACYE-----SNKYDLVSDLSARIYK 683



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 212/421 (50%), Gaps = 7/421 (1%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
           R  E    ++   +  + P+T T N V+K V  +GLV+ A  LF EM  R  +P+  +Y 
Sbjct: 147 RVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYR 206

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            ++ G CK   + E+   L  M   G      T ++++   C+ G + RA          
Sbjct: 207 VMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEM 266

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  PN + +  +I GLC +G++ +A  +L+ MV     PN  T+  +I+GL K G     
Sbjct: 267 GLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKA 326

Query: 352 ARVLMSMEERKFH-VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
            R+ + +   + H  N   Y+ +ISG  ++ K   A  L  +M E+G  PNT  Y+ LID
Sbjct: 327 FRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLID 386

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G C+ G  + A E++  M   G + N  TY++++ G  + G+  +A ++ K   +N    
Sbjct: 387 GHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDA 446

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           ++V Y++LI   C+  ++++A +++ +M+  G +PD+ +Y+++I   C    ++E+   F
Sbjct: 447 DKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFF 506

Query: 531 NEML--CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            E +   L P ++    TY  ++   C++ N+  ++   + M D GC  D +T    ++ 
Sbjct: 507 EEAVRFGLVPTNK----TYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISG 562

Query: 589 L 589
           L
Sbjct: 563 L 563



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 191/386 (49%), Gaps = 24/386 (6%)

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           ++    + G +  A ++V  M  +G  P+  T N ++  +   G ++ A +L D M A  
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
             PN V+Y  ++ G  KLG  ++  R L  M ER F V+    S ++    ++G    A+
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
             +++  E G +PN + ++ +I+GLC+ G   +A E+L EM+  G   N +T+++L+ G 
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 448 FESGKGHKAVEIWKDMAKN-NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
            + G   KA  ++  + ++ N   N + Y+ +I G C D K+  A M+ ++M  +G  P+
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
              Y+++I G C AG+ E A +L N M   E    P+V TYN +++ LCK+  +  +  +
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVM--NEEGFSPNVCTYNAIVDGLCKKGRVQEAYKV 435

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           L S    G D D VT  I ++   ++ E  Q         A+ LF +   SG        
Sbjct: 436 LKSGFRNGLDADKVTYTILISEHCKQAEIKQ---------ALVLFNKMVKSG-------- 478

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQ 652
               + P   ++  ++   CR KR++
Sbjct: 479 ----IQPDIHSYTTLIAVFCREKRMK 500



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 181/367 (49%), Gaps = 3/367 (0%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           ++K+   +G V  AI++  EM  +   P   T   ++  + +   ++ A  L DEM   G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             P  V++ V++ G CK G +  + + +  M  +G + +  T + ++   C KG + +A+
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
               R       PN + +  +I GL K G       +L  M  R +  N Y ++ LI GL
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 378 FKEGKAEDAMKLW-KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
            K+G  E A +L+ K +  +  KPN + Y+A+I G CR  K + AE +L  M   G A N
Sbjct: 318 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPN 377

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY++L+ G  ++G   +A E+   M +     N   Y+ ++ GLC+ G+++EA  V  
Sbjct: 378 TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLK 437

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
                G   D V Y+ +I   C    +++AL LFN+M  ++   QPD+ +Y  L+   C+
Sbjct: 438 SGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKM--VKSGIQPDIHSYTTLIAVFCR 495

Query: 557 QSNISHS 563
           +  +  S
Sbjct: 496 EKRMKES 502



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 155/337 (45%), Gaps = 11/337 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ ++I  Y         EM+L RM+ +       ++  +   + KA   E A  L + M
Sbjct: 345 TYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVM 404

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +E      V ++N++++ + ++G   R  E Y  + +     +  + +T+ ++I   C+
Sbjct: 405 NEEGF-SPNVCTYNAIVDGLCKKG---RVQEAYKVLKSGFRNGLDADKVTYTILISEHCK 460

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              +  A+ LF +M     +PDI++Y TL+   C+E R+ E+ +  +E    G  PT  T
Sbjct: 461 QAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKT 520

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  +I G C+ G L  A K    M   GC  + +TY  LI GLC +  LD+A  L D M+
Sbjct: 521 YTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAMI 580

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME--ERKFHVNEYIYSTLISGLFKEGK 382
                P EVT  T+     K+    DG   ++ +E  E+K  V     +TL+  L  E K
Sbjct: 581 EKGLTPCEVTRVTLAYEYCKID---DGCSAMVVLERLEKKLWVR--TVNTLVRKLCSERK 635

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
              A   + ++++K    N V  +A +       K D
Sbjct: 636 VGMAALFFHKLLDKDPNVNRVTIAAFMTACYESNKYD 672



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 160/334 (47%), Gaps = 19/334 (5%)

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           ++    ++GR  +   +++ M  +    +    + ++  + + G  E A  L+ +M  +G
Sbjct: 138 MVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG 197

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            +PN V Y  ++ G C++G   E++  L  MI  G   +  T S +++ F E G   +A+
Sbjct: 198 VQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRAL 257

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
             ++   +     N + ++ +I GLC+ G +++A  +  +M+ RG KP+V  ++++I GL
Sbjct: 258 WYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGL 317

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C  G  E+A +LF +++  E   +P+V TY  +++  C+   ++ +  LL+ M ++G  P
Sbjct: 318 CKKGWTEKAFRLFLKLVRSE-NHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAP 376

Query: 578 DLVTCNIF----------------LTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFK 621
           +  T                    +  + E+  +P   T   N +   L K+ R    +K
Sbjct: 377 NTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCT--YNAIVDGLCKKGRVQEAYK 434

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +++   +  L     T+  ++ E C+   I+ A+
Sbjct: 435 VLKSGFRNGLDADKVTYTILISEHCKQAEIKQAL 468



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/314 (21%), Positives = 141/314 (44%), Gaps = 21/314 (6%)

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           +  + F     +   ++    + G+ ++A+++  +M  +G  P+T   + ++  +  +G 
Sbjct: 123 ISNKNFEKAHEVMQCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGL 182

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            + AE +  EM   G   N  +Y  ++ G+ + G   ++      M +   V +    S+
Sbjct: 183 VEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSL 242

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           ++   CE G +  A   + +    G +P+++ ++ MI GLC  GSV++A ++  EM+   
Sbjct: 243 IVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRG 302

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLL----------------NSMMDRGC-DPDLV 580
            K  P+V+T+  L++ LCK+     +  L                  +M+   C D  + 
Sbjct: 303 WK--PNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMN 360

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
              + L+ +KE+  AP   T+    L     K       ++++ VM ++  SP   T+  
Sbjct: 361 RAEMLLSRMKEQGLAPN--TNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNA 418

Query: 641 VVQELCRPKRIQAA 654
           +V  LC+  R+Q A
Sbjct: 419 IVDGLCKKGRVQEA 432


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 188/342 (54%), Gaps = 9/342 (2%)

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           L ++T  R G + ++++++R   + + + D+ +Y   ++GLCK+ ++ EA+ +  EM+  
Sbjct: 62  LAVRTRRRRG-IPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEK 120

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P   T+N+LINGLCK+ +L     L+D M  +G  P  VTY TLIHG C  G +D A
Sbjct: 121 GSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAA 180

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE-----YIYS 371
           + +LD M      PN VTY  +I GL   G      R ++ ++E K   NE       Y+
Sbjct: 181 MDILDEMEHRGITPNTVTYTALIQGLCDCGEV---ERAILVLKEMKLRGNECCPNVVTYT 237

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI GL ++G  E  M+   +M+  GC PN   Y+ALI GLC+ G   EA  +L EM+  
Sbjct: 238 QLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAI 297

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           GC  +   Y+SL+ G  + G+   A E+   M +     +   Y+ LI GLC+ G L EA
Sbjct: 298 GCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEA 357

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             +  +M ++G  P+ V Y+++I+G   A   + AL+L NEM
Sbjct: 358 LGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEM 399



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/317 (37%), Positives = 170/317 (53%), Gaps = 4/317 (1%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           ++++  INGLCK G++  A ++   M  KG  P+  TYN LI+GLC    L+  VSL+D 
Sbjct: 92  ISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDE 151

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M A    P  VTY T+I+G    GR      +L  ME R    N   Y+ LI GL   G+
Sbjct: 152 MQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGE 211

Query: 383 AEDAMKLWKQMMEKG--CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
            E A+ + K+M  +G  C PN V Y+ LI GLC+ G  +   E L EMI +GC  N  TY
Sbjct: 212 VERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATY 271

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           ++L+ G  + G   +A  +  +M    C  + V Y+ LI GLC+ G+L  AR +   M+ 
Sbjct: 272 TALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVE 331

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           +G  PDV  Y+S+I GLC+AG ++EAL L  EM        P+  TY  L+N   +    
Sbjct: 332 KGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRA--KGIVPNSVTYTTLINGFTQADRT 389

Query: 561 SHSIDLLNSMMDRGCDP 577
            H++ L+N M   G  P
Sbjct: 390 DHALQLVNEMKSNGLMP 406



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/331 (34%), Positives = 181/331 (54%), Gaps = 5/331 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V S++  +N + ++G    A+E +  +   +     P++ T+N++I  +C+   ++  + 
Sbjct: 91  VISYSRKINGLCKKGQIAEAMEIFREM---EEKGSAPDSFTYNILINGLCKDAQLEMGVS 147

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L  EM  R   P + TY TL+ G C   R+D A+ +LDEM+  G  P  VT+  LI GLC
Sbjct: 148 LMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC 207

Query: 274 KNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
             GE+ RA  ++  M L+G  C PN VTY  LIHGLC KG  +  +  LD M+ S C PN
Sbjct: 208 DCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPN 267

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
             TY  +I+GL + G  ++ A +L  M      ++  IY++LI GL K G+ + A ++  
Sbjct: 268 NATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQI 327

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            M+EKG  P+   Y++LI GLC  G  DEA  ++ EM   G   N+ TY++L+ GF ++ 
Sbjct: 328 LMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQAD 387

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           +   A+++  +M  N  +     Y +L   L
Sbjct: 388 RTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/317 (35%), Positives = 181/317 (57%), Gaps = 2/317 (0%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + ++++  I  +C+ G +  A+++FREM  +   PD +TY  L++GLCK+ +L+  V L+
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           DEMQ  G  PT VT+  LI+G C  G +  A  ++D M  +G  PN VTY  LI GLC  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 311 GNLDKAVSLLDRMV--ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           G +++A+ +L  M    ++C PN VTY  +I+GL + G    G   L  M       N  
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ LI GL ++G   +A  L  +M+  GC+ + V+Y++LIDGLC++G+ D A E+   M
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +  G A + FTY+SL++G  ++G   +A+ + ++M     V N V Y+ LI+G  +  + 
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389

Query: 489 REARMVWTQMLSRGCKP 505
             A  +  +M S G  P
Sbjct: 390 DHALQLVNEMKSNGLMP 406



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/323 (32%), Positives = 167/323 (51%), Gaps = 13/323 (4%)

Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
           ++Y+  I+GLC KG + +A+ +   M      P+  TY  +INGL K  +   G  ++  
Sbjct: 92  ISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDE 151

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M+ R F      Y+TLI G    G+ + AM +  +M  +G  PNTV Y+ALI GLC  G+
Sbjct: 152 MQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGE 211

Query: 418 PDEAEEILFEMI--NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            + A  +L EM    N C  N  TY+ L+ G  + G     +E   +M  + C  N   Y
Sbjct: 212 VERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATY 271

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + LIHGLC+ G   EA ++  +M++ GC+ DVV Y+S+I GLC  G ++ A ++  ++L 
Sbjct: 272 TALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREM--QILM 329

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
           +E    PDVFTY  L+  LC    +  ++ L+  M  +G  P+ VT    +    +    
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQA--- 386

Query: 596 PQDGTDFLNELAIRLFKRQRTSG 618
             D TD     A++L    +++G
Sbjct: 387 --DRTDH----ALQLVNEMKSNG 403



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/322 (31%), Positives = 170/322 (52%), Gaps = 8/322 (2%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K   + EA+ +F  M ++     +  ++N ++N + ++      +   + +   +     
Sbjct: 103 KKGQIAEAMEIFREMEEKGSAPDSF-TYNILINGLCKDAQLEMGVSLMDEM---QARGFS 158

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +T+  +I   C  G VD A+ +  EM  R   P+  TY  L+ GLC    ++ A+L+
Sbjct: 159 PTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILV 218

Query: 250 LDEMQVDG--CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           L EM++ G  C P  VT+  LI+GLC+ G      + +D M + GC PN  TY  LIHGL
Sbjct: 219 LKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGL 278

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL-MSMEERKFHVN 366
           C KG+  +A  LL+ MVA  C  + V Y ++I+GL K+G  +D AR + + M E+    +
Sbjct: 279 CQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGE-LDFAREMQILMVEKGVAPD 337

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            + Y++LI GL   G  ++A+ L ++M  KG  PN+V Y+ LI+G  +  + D A +++ 
Sbjct: 338 VFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVN 397

Query: 427 EMINNGCAANAFTYSSLMKGFF 448
           EM +NG       Y  L K  +
Sbjct: 398 EMKSNGLMPAGDIYKILFKSLY 419



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 135/284 (47%), Gaps = 14/284 (4%)

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           ++++++  +      + + YS  I+GLC+ G+  EA EI  EM   G A ++FTY+ L+ 
Sbjct: 75  SLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILIN 134

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G  +  +    V +  +M         V Y+ LIHG C  G++  A  +  +M  RG  P
Sbjct: 135 GLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITP 194

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           + V Y+++I GLC+ G VE A+ +  EM     +  P+V TY  L++ LC++      ++
Sbjct: 195 NTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGME 254

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEK---LEAP-----------QDGTDFLNELAIRLF 611
            L+ M+  GC P+  T    +  L +K   LEA            +      N L   L 
Sbjct: 255 FLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLC 314

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           K        ++  +M++K ++P   T+  ++Q LC    +  A+
Sbjct: 315 KMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEAL 358


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 136/443 (30%), Positives = 223/443 (50%), Gaps = 6/443 (1%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV +F +++N +  EG    A  F + +   + M    N+ T   +I  +C++G    AI
Sbjct: 76  TVVTFATLINGLCAEGNVGAAARFADSL---EDMGYESNSYTHGTIINGLCKVGDTAGAI 132

Query: 213 QLFREMPVRNCEPDIY-TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
               ++  RN   D+   Y T+MD LCK+  L  A+     M   G  P  V +N LI+G
Sbjct: 133 SYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHG 192

Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
           LC  G    A  L+ NM  KG +PN  T+N L+   C +G + +A +++  MV     P+
Sbjct: 193 LCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPD 252

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY ++I+G   L +  D  +V   M  +    N   YS+LI G  K      A+ +  
Sbjct: 253 VVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLD 312

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
           +M+  G   + V +S LI G C+ G+P+ A E+   M  +    N  T + ++ G F+  
Sbjct: 313 EMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQ 372

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
              +A+ +++ M K N   N V Y++++ G+C  GK  +AR +++ + S+G + DVVAY+
Sbjct: 373 FHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYT 432

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +MI GLC  G +++A  L  +M   E    P+ FTYN+L+  L ++ +IS S   L  M 
Sbjct: 433 TMIKGLCKEGLLDDAEDLLMKM--EENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMK 490

Query: 572 DRGCDPDLVTCNIFLTALKEKLE 594
            +G   D  T  + ++      E
Sbjct: 491 GKGLSADATTTELLISYFSANKE 513



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 260/532 (48%), Gaps = 31/532 (5%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLF-HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
           +K F  +F    K      AI L  HT       K  V +   V+N +    L H    F
Sbjct: 7   DKDFATLFGVIVKMKHYATAISLIKHTY--SLGVKPDVHTLTIVINCLCH--LKHTVFGF 62

Query: 177 YNHIVNAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
              ++ A   + + P  +TF  +I  +C  G V  A +    +     E + YT+ T+++
Sbjct: 63  --SVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIIN 120

Query: 236 GLCKENRLDEAVLLLDEMQV-DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           GLCK      A+  L++++  +  F   + ++ +++ LCK+G L  A      M  KG  
Sbjct: 121 GLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQ 180

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+ V YN+LIHGLC  G  ++A +LL  M+    MPN  T+  +++   K G+      +
Sbjct: 181 PDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTI 240

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           +  M       +   Y+++ISG     +  DA+K+++ M+ KG  PN V YS+LI G C+
Sbjct: 241 MCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCK 300

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
               ++A  +L EM+NNG   +  T+S+L+ GF ++G+   A+E++  M +++ + N   
Sbjct: 301 TRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQT 360

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
            ++++ GL +     EA  ++ +M     + ++V Y+ ++ G+C+ G   +A +LF+   
Sbjct: 361 CAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFS--- 417

Query: 535 CLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
           CL  K  Q DV  Y  ++  LCK+  +  + DLL  M + GC P+  T N+ +  L ++ 
Sbjct: 418 CLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRY 477

Query: 594 EAPQDGTDFL--------------NELAIRLFKRQRTSGGFKIVEVMLQKFL 631
           +  +  T +L               EL I  F   + +     ++V LQKF+
Sbjct: 478 DISRS-TKYLMLMKGKGLSADATTTELLISYFSANKENSA---LQVFLQKFV 525



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 124/405 (30%), Positives = 198/405 (48%), Gaps = 3/405 (0%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           MN LP    F  +   + ++     AI L +       +PD++T   +++ LC       
Sbjct: 1   MNPLPPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVF 60

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
              +L  M   G  PT VTF  LINGLC  G +G AA+  D++   G   N  T+ T+I+
Sbjct: 61  GFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIIN 120

Query: 306 GLCLKGNLDKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           GLC  G+   A+S L+++   ++     + Y TI++ L K G           M  +   
Sbjct: 121 GLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQ 180

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y++LI GL   G+  +A  L   MM KG  PN   ++ L+D  C+ GK   A+ I
Sbjct: 181 PDLVAYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTI 240

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           +  M++ G   +  TY+S++ G     + + AV++++ M     + N V YS LIHG C+
Sbjct: 241 MCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCK 300

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
              + +A  V  +M++ G   DVV +S++I G C AG  E A++LF  M   E    P++
Sbjct: 301 TRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTM--HEHHQLPNL 358

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            T  I+L+ L K    S +I L   M     + ++VT NI L  +
Sbjct: 359 QTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGM 403



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 163/378 (43%), Gaps = 54/378 (14%)

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
           LP +  + TL   +    +   A+SL+    +    P+  T   +IN L  L   V G  
Sbjct: 4   LPPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFS 63

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           VL +M +         ++TLI+GL  EG    A +    + + G + N+  +  +I+GLC
Sbjct: 64  VLGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLC 123

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           +VG                  A A +Y   ++G                  +N      +
Sbjct: 124 KVGD----------------TAGAISYLEKIEG------------------RNRGFDLLI 149

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            YS ++  LC+DG L  A   ++ M  +G +PD+VAY+S+IHGLC+ G   EA  L   M
Sbjct: 150 AYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNM 209

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
           +       P+V T+N+L++  CK+  IS +  ++  M+  G +PD+VT N  ++     L
Sbjct: 210 M--RKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISG--HCL 265

Query: 594 EAPQDGTDFLNELAIR----------------LFKRQRTSGGFKIVEVMLQKFLSPQTST 637
            +  +    + EL I                   K +  +    +++ M+   L+    T
Sbjct: 266 LSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVT 325

Query: 638 WERVVQELCRPKRIQAAI 655
           W  ++   C+  R +AAI
Sbjct: 326 WSTLIGGFCKAGRPEAAI 343


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 152/546 (27%), Positives = 255/546 (46%), Gaps = 57/546 (10%)

Query: 134 VEEAIRLFHTMV--DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           V+ A+  +H MV    F C   VK FN +  ++ +   Y  A+    H+    ++ + PN
Sbjct: 7   VDVALDFYHKMVTMKPFPC---VKDFNLLFGIVAKMKHYTTAISLIKHM---SYIGVKPN 60

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
             T N+VI  +CRL        +   M     EP I T+ T+++GLC E  + +A+  +D
Sbjct: 61  VSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVD 120

Query: 252 -----------------------------------EMQVDGCFPTPVTFNVLINGLCKNG 276
                                              +M+   C      ++ +++GLCK+G
Sbjct: 121 HLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDG 180

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            +  A  L   M  KG  PN  TYN LIHGLC      +A  LL  M+    MP+  T+ 
Sbjct: 181 MVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFN 240

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            I    +K G       +   M       N   Y+++I       + +DAM+++  M+ K
Sbjct: 241 VIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRK 300

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           GC PN V Y++LI G C     ++A   L EM+NNG   +  T+S+L+ GF ++GK   A
Sbjct: 301 GCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAA 360

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            E++  M K+  + +    ++++ GL +     EA  ++ ++       D++ YS +++G
Sbjct: 361 KELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILNG 420

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           +C++G + +AL+LF+ +       + DV TYNI++N LCK+  +  + DLL  M + GC 
Sbjct: 421 MCSSGKLNDALELFSYL--SSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCP 478

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI-----------VEV 625
           PD  T N+F+  L  + E  +  T +L  +  + F+   T+    I            +V
Sbjct: 479 PDECTYNVFVQGLLRRYEISKS-TKYLMFMKGKGFRANATTTKLLINYFSANKENRAFQV 537

Query: 626 MLQKFL 631
            LQKF+
Sbjct: 538 FLQKFV 543



 Score = 42.7 bits (99), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 23/137 (16%)

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           N  SV+ AL  +++M+ ++P   P V  +N+L   + K  + + +I L+  M   G  P+
Sbjct: 3   NVKSVDVALDFYHKMVTMKP--FPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPN 60

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTW 638
           + T NI +  L                   RL     T  GF ++ +M +  + P   T+
Sbjct: 61  VSTHNIVINCL------------------CRL---NHTVFGFSVLGLMFKIGVEPSIVTF 99

Query: 639 ERVVQELCRPKRIQAAI 655
             +V  LC    +  AI
Sbjct: 100 TTIVNGLCVEGNVAQAI 116


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 232/468 (49%), Gaps = 40/468 (8%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+N V+  + + G    AL+ ++ +V+   M ++PN +T+N +I    + G ++   +L 
Sbjct: 18  SYNVVIAGLWRSGKGSDALKVFDEMVD---MGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL------- 268
            +M     +P+I TY  L+ GLC+  R+DE  +L+DEM     FP   T+++L       
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 269 ----------------------------INGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
                                       +NGLCK+G++ +A ++++ +   G +P  V Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           NTLI+G C   +L  A  + ++M +    P+ +TY  +INGL KL        ++M ME+
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                +   ++TLI      G+ E    +   M +KG K + + + +++   C+ GK  E
Sbjct: 255 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 314

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
           A  IL +MI    A NA  Y+S++  + ESG   +A  + + M  +    + V Y++L+ 
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 374

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           GLC   ++ EA  +   + ++G +PDVV+Y+++I   CN G  ++AL+L  EM   +   
Sbjct: 375 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM--NKYGI 432

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +P + TY+ L++AL     +     L   M+ +  +P      I + A
Sbjct: 433 RPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDA 480



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 202/399 (50%), Gaps = 2/399 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  ++N+VI  + R G   +A+++F EM      P+  TY T++DG  K   L+    L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M  DG  P  VT+NVL++GLC+ G +     L+D M      P+  TY+ L  GL  
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G     +SL    +    M    T   ++NGL K G+     +VL  +          I
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  +      A  +++QM  +  +P+ + Y+ALI+GLC++    +AE+++ EM 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            +G   +  T+++L+  +  +G+  K   +  DM +     + + +  ++   C++GK+ 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  +   M+ +   P+   Y+S+I     +G  E+A  L  +M          + TYN+
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM--KNSGVSASIVTYNL 371

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           LL  LC+ S I  + +L+ ++ ++G  PD+V+ N  ++A
Sbjct: 372 LLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 410



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 168/374 (44%), Gaps = 16/374 (4%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+  +YN +I GL   G    A+ + D MV    +PN +TY T+I+G VK G    G R+
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M       N   Y+ L+SGL + G+ ++   L  +M      P+   YS L DGL R
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
            G+      +  E +  G    A+T S L+ G  + GK  KA ++ + +     V   V 
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y+ LI+G C+   LR A  ++ QM SR  +PD + Y+++I+GLC    V +A  L  EM 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
             +    P V T+N L++A      +     +L+ M  +G   D+++    + A  +  +
Sbjct: 254 --KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGK 311

Query: 595 APQ--------------DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
            P+                    N +     +   T   F +VE M    +S    T+  
Sbjct: 312 IPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNL 371

Query: 641 VVQELCRPKRIQAA 654
           +++ LCR  +I  A
Sbjct: 372 LLKGLCRSSQIDEA 385



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/336 (22%), Positives = 156/336 (46%), Gaps = 18/336 (5%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNA-----------------KHMNILPNTLTFN 196
           V     VL +++  GL    +  YN ++N                  K  +I P+ +T+N
Sbjct: 172 VAKAEQVLEMLVHTGLVPTTV-IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYN 230

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            +I  +C+L +V  A  L  EM     +P + T+ TL+D      +L++   +L +MQ  
Sbjct: 231 ALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 290

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G     ++F  ++   CKNG++  A  ++D+M  K   PN   YN++I      G+ ++A
Sbjct: 291 GIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQA 350

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             L+++M  S    + VTY  ++ GL +  +  +   ++ ++  +    +   Y+T+IS 
Sbjct: 351 FLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISA 410

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
              +G  + A++L ++M + G +P    Y  L+  L   G+  + E +  +M++     +
Sbjct: 411 CCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPS 470

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           +  Y  ++  +       K   + K+M++    +++
Sbjct: 471 SSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 506



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 128/264 (48%), Gaps = 19/264 (7%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+ ++  F+T++D +     ++   +VL+ + Q+G                   I  + +
Sbjct: 257 VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKG-------------------IKSDVI 297

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           +F  V+K  C+ G +  A+ +  +M  ++  P+   Y +++D   +    ++A LL+++M
Sbjct: 298 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +  G   + VT+N+L+ GLC++ ++  A +L+  +  +G  P+ V+YNT+I   C KG+ 
Sbjct: 358 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 417

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           DKA+ LL  M      P   TY T+++ L   GR  D   +   M  +    +  IY  +
Sbjct: 418 DKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIM 477

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKG 397
           +    +         L K+M EKG
Sbjct: 478 VDAYVRCENDSKVASLKKEMSEKG 501



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 35/172 (20%), Positives = 77/172 (44%), Gaps = 4/172 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + S+I  Y  SGD +   +++ +M+         ++  + K   ++  ++EA  L +T+ 
Sbjct: 334 YNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLR 393

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
           ++   +  V S+N++++    +G   +ALE    +       I P   T++ ++  +   
Sbjct: 394 NQ-GLRPDVVSYNTIISACCNKGDTDKALELLQEM---NKYGIRPTLRTYHTLVSALASA 449

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           G V +   L+++M  +N EP    Y  ++D   +     +   L  EM   G
Sbjct: 450 GRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKG 501


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 234/492 (47%), Gaps = 23/492 (4%)

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
           V+ +EG+  +A   ++ ++ +    ++P    +  +I+  CR   V    +L  EM  RN
Sbjct: 356 VMSKEGVMEKAKALFDGMIAS---GLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRN 412

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
                YTY T++ G+C    LD A  ++ EM   GC P  V +  LI    +N   G A 
Sbjct: 413 IVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAM 472

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +++  M  +G  P+   YN+LI GL     +D+A S L  MV +   PN  TYG  I+G 
Sbjct: 473 RVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGY 532

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
           ++        + +  M E     N+ + + LI+   K+ K  +A   ++ M+++G   + 
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDA 592

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
             Y+ L++GL +  K D+AEEI  EM   G A + F+Y  L+ GF + G   KA  I+ +
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +     N + Y++L+ G C  G++ +A+ +  +M  +G  P+ V Y ++I G C +G 
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGD 712

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
           + EA +LF+EM        PD F Y  L++  C+ +++  +I +  +   +GC       
Sbjct: 713 LAEAFRLFDEMKL--KGLVPDSFVYTTLVDGCCRLNDVERAITIFGT-NKKGCASSTAPF 769

Query: 583 NIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
           N  +  +  K    +  T+ LN L    F R                F  P   T+  ++
Sbjct: 770 NALINWVF-KFGKTELKTEVLNRLMDGSFDR----------------FGKPNDVTYNIMI 812

Query: 643 QELCRPKRIQAA 654
             LC+   ++AA
Sbjct: 813 DYLCKEGNLEAA 824



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/493 (27%), Positives = 238/493 (48%), Gaps = 20/493 (4%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           ++P   T++++I  +C++  +++A  L  EM       D +TY  L+DGL K    D A 
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L+ EM   G    P  ++  I  + K G + +A  L D M   G +P    Y +LI G 
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEERKFHVN 366
           C + N+ +   LL  M     + +  TYGT++ G+   G  +DGA  ++  M       N
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD-LDGAYNIVKEMIASGCRPN 451

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
             IY+TLI    +  +  DAM++ K+M E+G  P+   Y++LI GL +  + DEA   L 
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM+ NG   NAFTY + + G+ E+ +   A +  K+M +   + N+V  + LI+  C+  
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKE 571

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ EA   +  M+ +G   D   Y+ +++GL     V++A ++F EM        PDVF+
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM--RGKGIAPDVFS 629

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           Y +L+N   K  N+  +  + + M++ G  P+++  N+ L       E  +   + L+E+
Sbjct: 630 YGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI-EKAKELLDEM 688

Query: 607 AIRLF---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
           +++                 K    +  F++ + M  K L P +  +  +V   CR   +
Sbjct: 689 SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDV 748

Query: 652 QAAINKCWSNLYG 664
           + AI    +N  G
Sbjct: 749 ERAITIFGTNKKG 761



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 240/549 (43%), Gaps = 51/549 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI+ Y    + +    +L  M++   V+   ++  + K    +  ++ A  +   M
Sbjct: 384 AYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEM 443

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +    C+  V  + +++   +Q   +  A+     +   K   I P+   +N +I  + +
Sbjct: 444 IAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM---KEQGIAPDIFCYNSLIIGLSK 499

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV- 263
              +D A     EM     +P+ +TY   + G  + +    A   + EM+  G  P  V 
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559

Query: 264 ----------------------------------TFNVLINGLCKNGELGRAAKLVDNMF 289
                                             T+ VL+NGL KN ++  A ++   M 
Sbjct: 560 CTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
            KG  P+  +Y  LI+G    GN+ KA S+ D MV     PN + Y  ++ G  + G   
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               +L  M  +  H N   Y T+I G  K G   +A +L+ +M  KG  P++ VY+ L+
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG CR+   + A  I F     GCA++   +++L+   F+ GK     E+   +   +  
Sbjct: 740 DGCCRLNDVERAITI-FGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD 798

Query: 470 Y----NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                N+V Y+++I  LC++G L  A+ ++ QM +    P V+ Y+S+++G    G   E
Sbjct: 799 RFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAE 858

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM-----MDRGCDPDLV 580
              +F+E   +    +PD   Y++++NA  K+   + ++ L++ M     +D GC   + 
Sbjct: 859 MFPVFDE--AIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSIS 916

Query: 581 TCNIFLTAL 589
           TC   L+  
Sbjct: 917 TCRALLSGF 925



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 201/381 (52%), Gaps = 12/381 (3%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           IL +  T+ +++  + +   VD+A ++FREM  +   PD+++Y  L++G  K   + +A 
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            + DEM  +G  P  + +N+L+ G C++GE+ +A +L+D M +KG  PN VTY T+I G 
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G+L +A  L D M     +P+   Y T+++G  +L   V+ A  +    ++    + 
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND-VERAITIFGTNKKGCASST 766

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMME----KGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             ++ LI+ +FK GK E   ++  ++M+    +  KPN V Y+ +ID LC+ G  + A+E
Sbjct: 767 APFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKE 826

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  +M N        TY+SL+ G+ + G+  +   ++ +        + + YSV+I+   
Sbjct: 827 LFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFL 886

Query: 484 EDGKLREARMVWTQMLSR-----GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           ++G   +A ++  QM ++     GCK  +    +++ G    G +E A K+   M+ L+ 
Sbjct: 887 KEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQ- 945

Query: 539 KSQPDVFTYNILLNALCKQSN 559
              PD  T   L+N  C  SN
Sbjct: 946 -YIPDSATVIELINESCISSN 965



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 184/441 (41%), Gaps = 42/441 (9%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNC-------------------EPDIYTYCTLM 234
           +F+ +   +C  G  + A+ +   M  RN                      D   +  L 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           DG   +  ++EAV +          P      VL++ L +   L     +   M  +  +
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 295 PNEVTYNTLIHGLCLKG---------------------NLDKAVSLLDRMVASKCMPNEV 333
            +  TY+ LI   C  G                     N+D A+ L + M+    +P + 
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+GL K+ R  D   +L+ M+     ++ + YS LI GL K   A+ A  L  +M
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           +  G      +Y   I  + + G  ++A+ +   MI +G    A  Y+SL++G+      
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +  E+  +M K N V +   Y  ++ G+C  G L  A  +  +M++ GC+P+VV Y+++
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I          +A+++  EM   E    PD+F YN L+  L K   +  +   L  M++ 
Sbjct: 459 IKTFLQNSRFGDAMRVLKEM--KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516

Query: 574 GCDPDLVTCNIFLTALKEKLE 594
           G  P+  T   F++   E  E
Sbjct: 517 GLKPNAFTYGAFISGYIEASE 537



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 128/266 (48%), Gaps = 16/266 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRV--VLEKSFIFIFKAYGKAHL--VEEAIRL 140
           T+ ++I  Y  SGD        +R+  E ++  ++  SF++     G   L  VE AI +
Sbjct: 699 TYCTIIDGYCKSGDLAEA----FRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI-LPNTLTFNLVI 199
           F T  ++  C  +   FN+++N + + G      E  N +++        PN +T+N++I
Sbjct: 755 FGT--NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMI 812

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C+ G ++ A +LF +M   N  P + TY +L++G  K  R  E   + DE    G  
Sbjct: 813 DYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIE 872

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-----GCLPNEVTYNTLIHGLCLKGNLD 314
           P  + ++V+IN   K G   +A  LVD MF K     GC  +  T   L+ G    G ++
Sbjct: 873 PDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEME 932

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIIN 340
            A  +++ MV  + +P+  T   +IN
Sbjct: 933 VAEKVMENMVRLQYIPDSATVIELIN 958


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 256/546 (46%), Gaps = 15/546 (2%)

Query: 59  AKSEQPFSDEIFNSTPKLGSYQLGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVL 117
           AK      D + + TP+LG   + D   YS L++   + G     + +L RM  E   V 
Sbjct: 172 AKRTDEALDILLHRTPELGC--VPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVC 228

Query: 118 EKSFIF---IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
             + +    +   + K   V +A  LF  MV        + ++NSV++ + +     +A 
Sbjct: 229 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDLVTYNSVVHALCKARAMDKAE 287

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
            F   +VN +   +LPN  T+N +I      G    A+++F+EM   +  PD+ T   LM
Sbjct: 288 AFLRQMVNKR---VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 344

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             LCK  ++ EA  + D M + G  P   ++N+++NG    G L     L D M   G  
Sbjct: 345 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 404

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+  T+N LI      G LDKA+ + + M      P+ VTY T+I  L ++G+  D    
Sbjct: 405 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 464

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M ++    ++Y Y+ LI G    G    A +L  ++M  G   + V +S++I+ LC+
Sbjct: 465 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 524

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +G+  +A+ I    +N G   +A  YS LM G+   GK  KA+ ++  M       N V 
Sbjct: 525 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 584

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y  L++G C+ G++ E   ++ +ML RG KP  + YS +I GL  AG    A   F+EM 
Sbjct: 585 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEM- 643

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEK 592
             E     D+ TYNI+L  L K      +I L   +       +++T N  +  +    +
Sbjct: 644 -TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 702

Query: 593 LEAPQD 598
           +E  +D
Sbjct: 703 VEEAKD 708



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 253/492 (51%), Gaps = 12/492 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREK---RVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI  Y+++G +K    V   MRR      VV     +     YGK   ++EA  +F
Sbjct: 304 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK---IKEARDVF 360

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            TM  +      V S+N +LN    +G      + ++ ++      I P+  TFN++IK 
Sbjct: 361 DTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD---GIAPDFYTFNVLIKA 416

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
               G++D A+ +F EM     +PD+ TY T++  LC+  ++D+A+   ++M   G  P 
Sbjct: 417 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 476

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
              +N LI G C +G L +A +L+  +   G   + V ++++I+ LC  G +  A ++ D
Sbjct: 477 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 536

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             V     P+ V Y  +++G   +G+     RV  +M       N  +Y TL++G  K G
Sbjct: 537 LTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIG 596

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + ++ + L+++M+++G KP+T++YS +IDGL + G+   A+    EM  +G A +  TY+
Sbjct: 597 RIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYN 656

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            +++G F++    +A+ ++K++   N   N +  + +I G+ +  ++ EA+ ++  +   
Sbjct: 657 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 716

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
              P+VV YS MI  L   G VEEA  +F+ M       +P+    N ++  L K++ I 
Sbjct: 717 RLVPNVVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPNSRLLNHVVRELLKKNEIV 774

Query: 562 HSIDLLNSMMDR 573
            +   L+ + +R
Sbjct: 775 RAGAYLSKIDER 786



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 258/526 (49%), Gaps = 48/526 (9%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHI 180
           +  A  KA  +++A      MV+    KR +    ++N+++      G +  A+  +  +
Sbjct: 273 VVHALCKARAMDKAEAFLRQMVN----KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 328

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +  +ILP+ +T ++++ ++C+ G +  A  +F  M ++   PD+++Y  +++G   +
Sbjct: 329 ---RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 385

Query: 241 N-----------------------------------RLDEAVLLLDEMQVDGCFPTPVTF 265
                                                LD+A+++ +EM+  G  P  VT+
Sbjct: 386 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 445

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             +I  LC+ G++  A +  + M  +G  P++  YN LI G C  G+L KA  L+  ++ 
Sbjct: 446 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 505

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +    + V + +IIN L KLGR +D   +         H +  +YS L+ G    GK E 
Sbjct: 506 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEK 565

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A++++  M+  G +PN VVY  L++G C++G+ DE   +  EM+  G   +   YS ++ 
Sbjct: 566 ALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 625

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G F++G+   A   + +M ++    +   Y++++ GL ++    EA  ++ ++ +   K 
Sbjct: 626 GLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI 685

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           +++  ++MI G+     VEEA  LF  +     +  P+V TY+I++  L K+  +  + D
Sbjct: 686 NIITLNTMIDGMFQTRRVEEAKDLFASIS--RSRLVPNVVTYSIMITNLIKEGLVEEAED 743

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           + +SM + GC+P+    N  +  L +K E  + G  +L+++  R F
Sbjct: 744 MFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA-YLSKIDERNF 788



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 203/395 (51%), Gaps = 7/395 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-L 248
           P + T+ +++    R    + A+  F ++       +I     L++G C+  R DEA+ +
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHG 306
           LL      GC P   ++++L+  LC  G+ G+A  L+  M   G  C PN V YNT+I G
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSMEERKFHV 365
              +G+++KA  L   MV     P+ VTY ++++ L K  RA+D A   L  M  ++   
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK-ARAMDKAEAFLRQMVNKRVLP 300

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N + Y+ LI G    G+ ++A++++K+M      P+ V  S L+  LC+ GK  EA ++ 
Sbjct: 301 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 360

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M   G   + F+Y+ ++ G+   G      +++  M  +    +   ++VLI      
Sbjct: 361 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 420

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L +A +++ +M   G KPDVV Y ++I  LC  G +++A++ FN+M  ++    PD +
Sbjct: 421 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM--IDQGVAPDKY 478

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            YN L+   C   ++  + +L++ +M+ G   D+V
Sbjct: 479 AYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 513



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 54/349 (15%)

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R      + Y+ L+    +  + E A+  + Q++  G + N ++ + L++G C   + DE
Sbjct: 118 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 177

Query: 421 AEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN--CVYNEVCYSV 477
           A +IL       GC  + F+YS L+K   + GK  +A ++ + MA+    C  N V Y+ 
Sbjct: 178 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 237

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA----------------- 520
           +I G  ++G + +A  ++ +M+ RG  PD+V Y+S++H LC A                 
Sbjct: 238 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 297

Query: 521 ------------------GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
                             G  +EA+++F EM        PDV T ++L+ +LCK   I  
Sbjct: 298 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM--RRHSILPDVVTLSMLMGSLCKYGKIKE 355

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAPQDGTDFLNELAIR--------LFK 612
           + D+ ++M  +G +PD+ + NI L     K  L    D  D +    I         L K
Sbjct: 356 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 415

Query: 613 RQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
                G       I   M    + P   T+  V+  LCR  ++  A+ K
Sbjct: 416 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 464


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 248/484 (51%), Gaps = 13/484 (2%)

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVD-EFHCKRTVKSFNSVLNVIIQE 167
           MR+E R+        I ++  ++   +  + LF  MV   F   + V  +   +   ++ 
Sbjct: 22  MRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLV--YGRAMLAAVKL 79

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           G    A+E +  +   K   ++PN   +N++I  +C+   + +A +LF EM VRN  P+ 
Sbjct: 80  GDLKLAMELFETM---KRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNR 136

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            T+ TL+DG CK   +D A+ L + M+ +   P+ +TFN L++GLCK   +  A  +++ 
Sbjct: 137 VTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNE 196

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD---RMVASKCMPNEVTYGTIINGLVK 344
           +   G +P+  TY+ +  GL LK + D A + LD     +      +  T   ++NGL K
Sbjct: 197 IKCNGFVPDGFTYSIIFDGL-LKSD-DGAGAALDLYREAIGKGVKIDNYTCSILLNGLCK 254

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G+      VL S+ E      E IY+T+++G  + G  + A+   +QM  +G +PN + 
Sbjct: 255 EGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIA 314

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           ++++ID  C +   D+AEE + +M+  G A +  TY+ L+ G+       +  +I ++M 
Sbjct: 315 FNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEME 374

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
           +N    N + Y  LI+ LC+DGK+ EA MV   M+ RG  P+   Y+ +I G C  G + 
Sbjct: 375 ENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLR 434

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           EAL+ F+EM   +      + TYN L+  LCK   +  + ++   +   G  PD++T N 
Sbjct: 435 EALRFFDEMS--KNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNS 492

Query: 585 FLTA 588
            ++ 
Sbjct: 493 LISG 496



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 150/514 (29%), Positives = 256/514 (49%), Gaps = 26/514 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +LI  Y  +G+      +  RM++EK      +F  +     KA  +EEA      M
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEA----RCM 193

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHR------ALEFYNHIVNAKHMNILPNTLTFNLV 198
           ++E  C   V   +     II +GL         AL+ Y   +  K + I  +  T +++
Sbjct: 194 LNEIKCNGFVP--DGFTYSIIFDGLLKSDDGAGAALDLYREAI-GKGVKI--DNYTCSIL 248

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           +  +C+ G V+ A ++ + +      P    Y T+++G C+   +D A+L +++M+  G 
Sbjct: 249 LNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGL 308

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG---LCLKGNLDK 315
            P  + FN +I+  C+   + +A + V  M  KG  P+  TYN LI G   LC+     +
Sbjct: 309 RPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCV---FSR 365

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
              +L+ M  +   PN ++YG++IN L K G+ ++   VL  M  R    N  IY+ LI 
Sbjct: 366 CFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLID 425

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G    GK  +A++ + +M + G     V Y++LI GLC++GK  EAEE+ F + + G   
Sbjct: 426 GSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCP 485

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG-KLREARMV 494
           +  TY+SL+ G+  +G   K +E+++ M K         +  LI G  ++G KL+E   +
Sbjct: 486 DVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKET--L 543

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           + +ML     PD V Y++MIH     G V++A  L  EM  ++   +PD  TYN L+   
Sbjct: 544 FNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEM--VDMGVRPDNKTYNSLILGH 601

Query: 555 CKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            K+  +S + DL++ M  +G  P+  T ++ +  
Sbjct: 602 LKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQG 635



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 191/380 (50%), Gaps = 6/380 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FNSV++   +  +  +A E+   +V      I P+  T+N++I    RL +     Q+ 
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGK---GIAPSVETYNILIDGYGRLCVFSRCFQIL 370

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM     +P++ +Y +L++ LCK+ ++ EA ++L +M   G  P    +N+LI+G C  
Sbjct: 371 EEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTV 430

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A +  D M   G     VTYN+LI GLC  G L +A  +   + ++   P+ +TY
Sbjct: 431 GKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITY 490

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG-KAEDAMKLWKQMM 394
            ++I+G    G +     +  +M++         +  LISG  KEG K ++   L+ +M+
Sbjct: 491 NSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKET--LFNEML 548

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           +    P+ VVY+A+I      G   +A  +  EM++ G   +  TY+SL+ G  + GK  
Sbjct: 549 QMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLS 608

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +  ++  DM     +     YS+LI G C+      A + + +ML  G  P+V   + + 
Sbjct: 609 ETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELS 668

Query: 515 HGLCNAGSVEEALKLFNEML 534
            GL   G ++EA  + +EM+
Sbjct: 669 TGLRKDGRLQEAQSICSEMI 688



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 5/242 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI+     G  K  E + + +          ++  +   Y  A   ++ + L+ TM
Sbjct: 454 TYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETM 513

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +   K T+ +F+ +++   +EG+  +    +N ++    MN+ P+ + +N +I     
Sbjct: 514 -KKLGLKPTINTFHPLISGCSKEGIKLKE-TLFNEML---QMNLSPDRVVYNAMIHCYQE 568

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G V  A  L +EM      PD  TY +L+ G  KE +L E   L+D+M+  G  P   T
Sbjct: 569 TGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADT 628

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +++LI G C   +   A      M   G LPN    N L  GL   G L +A S+   M+
Sbjct: 629 YSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMI 688

Query: 325 AS 326
           A+
Sbjct: 689 AN 690


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 157/546 (28%), Positives = 256/546 (46%), Gaps = 15/546 (2%)

Query: 59  AKSEQPFSDEIFNSTPKLGSYQLGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVL 117
           AK      D + + TP+LG   + D   YS L++   + G     + +L RM  E   V 
Sbjct: 159 AKRTDEALDILLHRTPELGC--VPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVC 215

Query: 118 EKSFIF---IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
             + +    +   + K   V +A  LF  MV        + ++NSV++ + +     +A 
Sbjct: 216 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDLVTYNSVVHALCKARAMDKAE 274

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
            F   +VN +   +LPN  T+N +I      G    A+++F+EM   +  PD+ T   LM
Sbjct: 275 AFLRQMVNKR---VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 331

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             LCK  ++ EA  + D M + G  P   ++N+++NG    G L     L D M   G  
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+  T+N LI      G LDKA+ + + M      P+ VTY T+I  L ++G+  D    
Sbjct: 392 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M ++    ++Y Y+ LI G    G    A +L  ++M  G   + V +S++I+ LC+
Sbjct: 452 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +G+  +A+ I    +N G   +A  YS LM G+   GK  KA+ ++  M       N V 
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y  L++G C+ G++ E   ++ +ML RG KP  + YS +I GL  AG    A   F+EM 
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEM- 630

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEK 592
             E     D+ TYNI+L  L K      +I L   +       +++T N  +  +    +
Sbjct: 631 -TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 689

Query: 593 LEAPQD 598
           +E  +D
Sbjct: 690 VEEAKD 695



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 252/492 (51%), Gaps = 12/492 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREK---RVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI  Y+++G +K    V   MRR      VV     +     YGK   ++EA  +F
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK---IKEARDVF 347

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            TM  +      V S+N +LN    +G      + ++ ++      I P+  TFN++IK 
Sbjct: 348 DTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD---GIAPDFYTFNVLIKA 403

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
               G++D A+ +F EM     +PD+ TY T++  LC+  ++D+A+   ++M   G  P 
Sbjct: 404 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 463

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
              +N LI G C +G L +A +L+  +   G   + V ++++I+ LC  G +  A ++ D
Sbjct: 464 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 523

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             V     P+ V Y  +++G   +G+     RV  +M       N  +Y TL++G  K G
Sbjct: 524 LTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIG 583

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + ++ + L+++M+++G KP+T++YS +IDGL + G+   A+    EM  +G A +  TY+
Sbjct: 584 RIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYN 643

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            +++G F++    +A+ ++K++   N   N +  + +I G+ +  ++ EA+ ++  +   
Sbjct: 644 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 703

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
              P VV YS MI  L   G VEEA  +F+ M       +P+    N ++  L K++ I 
Sbjct: 704 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPNSRLLNHVVRELLKKNEIV 761

Query: 562 HSIDLLNSMMDR 573
            +   L+ + +R
Sbjct: 762 RAGAYLSKIDER 773



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 257/526 (48%), Gaps = 48/526 (9%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHI 180
           +  A  KA  +++A      MV+    KR +    ++N+++      G +  A+  +  +
Sbjct: 260 VVHALCKARAMDKAEAFLRQMVN----KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 315

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +  +ILP+ +T ++++ ++C+ G +  A  +F  M ++   PD+++Y  +++G   +
Sbjct: 316 ---RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 372

Query: 241 N-----------------------------------RLDEAVLLLDEMQVDGCFPTPVTF 265
                                                LD+A+++ +EM+  G  P  VT+
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 432

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             +I  LC+ G++  A +  + M  +G  P++  YN LI G C  G+L KA  L+  ++ 
Sbjct: 433 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 492

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +    + V + +IIN L KLGR +D   +         H +  +YS L+ G    GK E 
Sbjct: 493 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEK 552

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A++++  M+  G +PN VVY  L++G C++G+ DE   +  EM+  G   +   YS ++ 
Sbjct: 553 ALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 612

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G F++G+   A   + +M ++    +   Y++++ GL ++    EA  ++ ++ +   K 
Sbjct: 613 GLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI 672

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           +++  ++MI G+     VEEA  LF  +     +  P V TY+I++  L K+  +  + D
Sbjct: 673 NIITLNTMIDGMFQTRRVEEAKDLFASIS--RSRLVPSVVTYSIMITNLIKEGLVEEAED 730

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           + +SM + GC+P+    N  +  L +K E  + G  +L+++  R F
Sbjct: 731 MFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA-YLSKIDERNF 775



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 203/395 (51%), Gaps = 7/395 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-L 248
           P + T+ +++    R    + A+  F ++       +I     L++G C+  R DEA+ +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHG 306
           LL      GC P   ++++L+  LC  G+ G+A  L+  M   G  C PN V YNT+I G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSMEERKFHV 365
              +G+++KA  L   MV     P+ VTY ++++ L K  RA+D A   L  M  ++   
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK-ARAMDKAEAFLRQMVNKRVLP 287

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N + Y+ LI G    G+ ++A++++K+M      P+ V  S L+  LC+ GK  EA ++ 
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 347

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M   G   + F+Y+ ++ G+   G      +++  M  +    +   ++VLI      
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 407

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L +A +++ +M   G KPDVV Y ++I  LC  G +++A++ FN+M  ++    PD +
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM--IDQGVAPDKY 465

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            YN L+   C   ++  + +L++ +M+ G   D+V
Sbjct: 466 AYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500



 Score =  132 bits (331), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 179/406 (44%), Gaps = 39/406 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           +F  + KAY    ++++A+ +F+ M D    K  V ++ +V+  + + G    A+E +N 
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDH-GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQ 454

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +++     + P+   +N +I+  C  G +  A +L  E+       DI  + ++++ LCK
Sbjct: 455 MID---QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 511

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             R+ +A  + D     G  P  V +++L++G C  G++ +A ++ D M   G  PN V 
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVV 571

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           Y TL++G C  G +D+ +SL   M+     P+ + Y  II+GL + GR V        M 
Sbjct: 572 YCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMT 631

Query: 360 ER-----------------------------------KFHVNEYIYSTLISGLFKEGKAE 384
           E                                       +N    +T+I G+F+  + E
Sbjct: 632 ESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVE 691

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           +A  L+  +      P+ V YS +I  L + G  +EAE++   M N GC  N+   + ++
Sbjct: 692 EAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVV 751

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           +   +  +  +A      + + N     +   +L+      G  RE
Sbjct: 752 RELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 152/349 (43%), Gaps = 54/349 (15%)

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R      + Y+ L+    +  + E A+  + Q++  G + N ++ + L++G C   + DE
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 164

Query: 421 AEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN--CVYNEVCYSV 477
           A +IL       GC  + F+YS L+K   + GK  +A ++ + MA+    C  N V Y+ 
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 224

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA----------------- 520
           +I G  ++G + +A  ++ +M+ RG  PD+V Y+S++H LC A                 
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 284

Query: 521 ------------------GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
                             G  +EA+++F EM        PDV T ++L+ +LCK   I  
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM--RRHSILPDVVTLSMLMGSLCKYGKIKE 342

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAPQDGTDFLNELAIR--------LFK 612
           + D+ ++M  +G +PD+ + NI L     K  L    D  D +    I         L K
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIK 402

Query: 613 RQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
                G       I   M    + P   T+  V+  LCR  ++  A+ K
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 451


>gi|302811221|ref|XP_002987300.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
 gi|300144935|gb|EFJ11615.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
          Length = 511

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 133/461 (28%), Positives = 249/461 (54%), Gaps = 25/461 (5%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K  LV++A  L H M+D+     TV + NS+L+ + +      A++ Y  +  +    + 
Sbjct: 21  KGGLVDDAAELVHGMMDKGPYPDTV-TCNSLLDGLFKVNKVEHAMKLYEKMSRS---FVK 76

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLF------REMPVRNCEPDIYTYCTLMDGLCKENRL 243
            +  T+N+++  +C+ G +  A Q        RE PVR+       Y  L+ GLCK  + 
Sbjct: 77  ADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRH----ELLYEALIGGLCKVGKY 132

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           D A+ +  +M++    P+ +++N++I    K G    A +L   M +K  +P+  T+NT+
Sbjct: 133 DHAMAVFRKMKL----PSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFNTV 188

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  L   G   +A+ ++D MV  +C PNE+T+G +++GL K  RA++   VL  M+    
Sbjct: 189 IQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVMDRVGC 248

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG---CKPNTVVYSALIDGLCRVGKPDE 420
             +  + + LISG  KEG+ +DA +L+++M+  G    KPN   ++ +I GLC+  K  E
Sbjct: 249 VPDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCKANKVGE 308

Query: 421 AEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAV-EIWKDMAKNNCVYNEVCYSVL 478
           A+ ++  M +  G A + FT+++++ G F++G    A  +++++M++  C  + V +++L
Sbjct: 309 ADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEMSRFGCHPDSVTFTIL 368

Query: 479 IHGLCEDGKLREARMVWTQMLSR--GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +   C+  ++ EA  +  QM     GC PD +++++++  LC  G +EEA+  F   +  
Sbjct: 369 VSESCKQRRIHEALELVEQMTKNKGGCAPDTLSFNALLGCLCCDGRLEEAVAKFWGEMRE 428

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
             +  PD  T+ +L+   CKQ NI  +  +++ M+ RG  P
Sbjct: 429 RRECWPDAVTHALLVRQCCKQRNIELACRIVDEMLHRGFVP 469



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 207/405 (51%), Gaps = 15/405 (3%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N+V+ ++C+ GLVD+A +L   M  +   PD  T  +L+DGL K N+++ A+ L ++M
Sbjct: 11  TCNIVVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLYEKM 70

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP--NEVTYNTLIHGLCLKG 311
                     T+N+L++GLCK G +  A + +         P  +E+ Y  LI GLC  G
Sbjct: 71  SRSFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCKVG 130

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
             D A+++  +M     +P+ ++Y  +I   VK GR      +   M+ +K   + + ++
Sbjct: 131 KYDHAMAVFRKMK----LPSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFN 186

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           T+I  L K GK ++A+ +  +M+   C PN + +  L+ GLC+  +  EAE +L  M   
Sbjct: 187 TVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVMDRV 246

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY---NEVCYSVLIHGLCEDGKL 488
           GC  +    ++L+ G  + G+   A  +++ M      +   N   ++++IHGLC+  K+
Sbjct: 247 GCVPDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCKANKV 306

Query: 489 REARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALK-LFNEMLCLEPKSQPDVFT 546
            EA  +  +M    G  PD   ++++I G   AG  + A K LF EM        PD  T
Sbjct: 307 GEADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEM--SRFGCHPDSVT 364

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDR--GCDPDLVTCNIFLTAL 589
           + IL++  CKQ  I  +++L+  M     GC PD ++ N  L  L
Sbjct: 365 FTILVSESCKQRRIHEALELVEQMTKNKGGCAPDTLSFNALLGCL 409



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 123/408 (30%), Positives = 211/408 (51%), Gaps = 31/408 (7%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           MQ   C     T N++++ LCK G +  AA+LV  M  KG  P+ VT N+L+ GL     
Sbjct: 1   MQSIACLDVK-TCNIVVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNK 59

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL-MSMEERKFHV-NEYIY 370
           ++ A+ L ++M  S    +  TY  +++GL K GR  +  + L  ++ +R+  V +E +Y
Sbjct: 60  VEHAMKLYEKMSRSFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLY 119

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
             LI GL K GK + AM ++++M      P+++ Y+ +I    + G+ + A E+  EM  
Sbjct: 120 EALIGGLCKVGKYDHAMAVFRKMK----LPSSMSYNIVIAACVKRGRNEAAVELFREMKV 175

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
                + FT++++++   ++GK  +A++I  +M    C  NE+ + +L+HGLC+  +  E
Sbjct: 176 KKRVPDIFTFNTVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALE 235

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK-SQPDVFTYNI 549
           A  V   M   GC PDVV  +++I G    G V++A +LF  ML    + S+P++ T+NI
Sbjct: 236 AESVLEVMDRVGCVPDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNI 295

Query: 550 LLNALCKQSNISHSIDLLNSMMDR-GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           +++ LCK + +  +  L+  M D  G  PD  T N  +           DG         
Sbjct: 296 MIHGLCKANKVGEADALVRRMEDECGVAPDEFTFNTII-----------DGH-------- 336

Query: 609 RLFKRQRTSGGFKIVEVMLQKF-LSPQTSTWERVVQELCRPKRIQAAI 655
             FK   + G FK +   + +F   P + T+  +V E C+ +RI  A+
Sbjct: 337 --FKAGDSKGAFKQLFQEMSRFGCHPDSVTFTILVSESCKQRRIHEAL 382



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 192/355 (54%), Gaps = 10/355 (2%)

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           Y+H +       LP+++++N+VI    + G  + A++LFREM V+   PDI+T+ T++  
Sbjct: 132 YDHAMAVFRKMKLPSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFNTVIQS 191

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L K  +  EA+ ++DEM    C P  +TF +L++GLCK      A  +++ M   GC+P+
Sbjct: 192 LSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVMDRVGCVPD 251

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASK---CMPNEVTYGTIINGLVKLGRAVDGAR 353
            V    LI G   +G +D A  L +RM++       PN  T+  +I+GL K  +  +   
Sbjct: 252 VVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCKANKVGEADA 311

Query: 354 VLMSMEER-KFHVNEYIYSTLISGLFKEGKAEDAMK-LWKQMMEKGCKPNTVVYSALIDG 411
           ++  ME+      +E+ ++T+I G FK G ++ A K L+++M   GC P++V ++ L+  
Sbjct: 312 LVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEMSRFGCHPDSVTFTILVSE 371

Query: 412 LCRVGKPDEAEEILFEMINN--GCAANAFTYSSLMKGFFESGKGHKAV-EIWKDM-AKNN 467
            C+  +  EA E++ +M  N  GCA +  ++++L+      G+  +AV + W +M  +  
Sbjct: 372 SCKQRRIHEALELVEQMTKNKGGCAPDTLSFNALLGCLCCDGRLEEAVAKFWGEMRERRE 431

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           C  + V +++L+   C+   +  A  +  +ML RG  P     +SM+  L  +GS
Sbjct: 432 CWPDAVTHALLVRQCCKQRNIELACRIVDEMLHRGFVP-TPGIASMLVNLIQSGS 485



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 214/445 (48%), Gaps = 34/445 (7%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D+ T   ++D LCK   +D+A  L+  M   G +P  VT N L++GL K  ++  A KL 
Sbjct: 8   DVKTCNIVVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLY 67

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP--NEVTYGTIINGLV 343
           + M       +  TYN L+HGLC  G + +A   L   +  +  P  +E+ Y  +I GL 
Sbjct: 68  EKMSRSFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLC 127

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K+G+      V   M+      +   Y+ +I+   K G+ E A++L+++M  K   P+  
Sbjct: 128 KVGKYDHAMAVFRKMK----LPSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIF 183

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            ++ +I  L + GK  EA +I+ EM+   C+ N  T+  L+ G  ++ +  +A  + + M
Sbjct: 184 TFNTVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVM 243

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG---CKPDVVAYSSMIHGLCNA 520
            +  CV + V  + LI G  ++G++ +A  ++ +MLS G    KP++  ++ MIHGLC A
Sbjct: 244 DRVGCVPDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCKA 303

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR-GCDPDL 579
             V EA  L   M   E    PD FT+N +++   K  +   +   L   M R GC PD 
Sbjct: 304 NKVGEADALVRRME-DECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEMSRFGCHPDS 362

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQK--FLSPQTST 637
           VT  I ++                        K++R     ++VE M +     +P T +
Sbjct: 363 VTFTILVS---------------------ESCKQRRIHEALELVEQMTKNKGGCAPDTLS 401

Query: 638 WERVVQELCRPKRIQAAINKCWSNL 662
           +  ++  LC   R++ A+ K W  +
Sbjct: 402 FNALLGCLCCDGRLEEAVAKFWGEM 426



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 139/314 (44%), Gaps = 8/314 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF ++IQ  + +G FK    ++  M   +    E +F  +     KA    EA  +   M
Sbjct: 184 TFNTVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVM 243

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   C   V    ++++  ++EG    A   +  +++       PN  TFN++I  +C+
Sbjct: 244 -DRVGCVPDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCK 302

Query: 205 LGLVDNAIQLFREMPVR-NCEPDIYTYCTLMDGLCKENRLDEAV-LLLDEMQVDGCFPTP 262
              V  A  L R M       PD +T+ T++DG  K      A   L  EM   GC P  
Sbjct: 303 ANKVGEADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEMSRFGCHPDS 362

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLK--GCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           VTF +L++  CK   +  A +LV+ M     GC P+ +++N L+  LC  G L++AV+  
Sbjct: 363 VTFTILVSESCKQRRIHEALELVEQMTKNKGGCAPDTLSFNALLGCLCCDGRLEEAVAKF 422

Query: 321 --DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
             +     +C P+ VT+  ++    K        R++  M  R F     I S L++ L 
Sbjct: 423 WGEMRERRECWPDAVTHALLVRQCCKQRNIELACRIVDEMLHRGFVPTPGIASMLVN-LI 481

Query: 379 KEGKAEDAMKLWKQ 392
           + G  +   + W Q
Sbjct: 482 QSGSDDARHRQWLQ 495


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/524 (28%), Positives = 257/524 (49%), Gaps = 26/524 (4%)

Query: 84  STFYSLIQHYANSG----DFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           +TF  LI    ++G     F +L  ++    R   V    +F  + +         +A+ 
Sbjct: 14  ATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAV----AFTPLLRTLCAKKRTSDAMN 69

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           +    + E  C   V S++++L  +  E     A E   H++     N  P+ ++++ VI
Sbjct: 70  IVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELI-HMMAEDGDNCPPDVVSYSTVI 128

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
               + G V  A  LF +M      P++ T  +++DGLCK   +D+A  +L +M  +   
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P   T+N LI+G   +G+   A +++  M   G  PN VTYN LI  LC  G   +A  +
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            + M+ S   P+  TYG++++G    G  V+   V   M +     N + +S  I    K
Sbjct: 249 FNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCK 308

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G+ ++A   + +M + G  P+ V Y+ +IDGLC++G+ D+A     +MI++G + N  T
Sbjct: 309 CGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIIT 368

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           +++L+ GF   GK  KA E++ +M       +   ++ +I  L ++GK+ EA+ ++  M 
Sbjct: 369 FTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMP 428

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC--LEPKS---------------QP 542
             G KP+VV+Y++MIHG   AG V E +KL ++ML   L+P +               +P
Sbjct: 429 RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKP 488

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           DV T   L+++ C+   I   + L   M+ +    D +T NI L
Sbjct: 489 DVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 532



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/468 (28%), Positives = 229/468 (48%), Gaps = 28/468 (5%)

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +  A    + P+  TF ++I   C  G ++       ++       D   +  L+  LC 
Sbjct: 1   MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCA 60

Query: 240 ENRLDEAV-LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPN 296
           + R  +A+ ++L  M   GC P   +++ L+ GLC   +   AA+L+  M   G  C P+
Sbjct: 61  KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VL 355
            V+Y+T+IHG   +G++ KA +L  +M+     PN VT  ++I+GL K+ +A+D A  VL
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKV-QAMDKAEAVL 179

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M +     N   Y++LI G    G+  +A+++ K+M   G +PN V Y+ LID LC+ 
Sbjct: 180 QQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKS 239

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G   EA EI   MI +G   +A TY SL+ G+   G   +   +   M +N    N   +
Sbjct: 240 GFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTF 299

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           S+ I+  C+ G+L EA + + +M   G  PD+V Y+++I GLC  G +++A+  F +M  
Sbjct: 300 SIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQM-- 357

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
           ++    P++ T+  L++          + +L   MMDRG  PD+       TA+ +    
Sbjct: 358 IDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVT----IFTAMID---- 409

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
                        RLFK  + +   K+ ++M +    P   ++  ++ 
Sbjct: 410 -------------RLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIH 444



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 211/437 (48%), Gaps = 40/437 (9%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQL-FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           + + F  +++T+C      +A+ +  R MP   C PD+++Y TL+ GLC E + +EA  L
Sbjct: 47  DAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAEL 106

Query: 250 LDEMQVDG--CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           +  M  DG  C P  V+++ +I+G  K G++G+A  L   M   G  PN VT N++I GL
Sbjct: 107 IHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGL 166

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C    +DKA ++L +M+    MPN  TY ++I+G +  G+  +  R+L  M       N 
Sbjct: 167 CKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNV 226

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL--------------- 412
             Y+ LI  L K G   +A +++  M++ G KP+   Y +L+ G                
Sbjct: 227 VTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDL 286

Query: 413 --------------------CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
                               C+ G+ DEA     +M   G   +  TY++++ G  + G+
Sbjct: 287 MVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGR 346

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A+  +  M  +    N + ++ LIHG    GK  +A  ++ +M+ RG  PDV  +++
Sbjct: 347 LDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTA 406

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           MI  L   G V EA KLF+ M      ++P+V +YN +++       +   + LL+ M+ 
Sbjct: 407 MIDRLFKEGKVTEAQKLFDLMP--RAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 464

Query: 573 RGCDPDLVTCNIFLTAL 589
            G  P  VT N  L  +
Sbjct: 465 IGLKPTAVTFNTLLDGM 481


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 149/539 (27%), Positives = 245/539 (45%), Gaps = 68/539 (12%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V + N VLN +  +G   +A      + N +    LPN +T+N ++    + G   +A++
Sbjct: 230 VTTCNIVLNSLCTQGKLSKAESMLQKMKNCR----LPNAVTYNTILNWYVKKGRCKSALR 285

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  +M     E D+YTY  ++D LCK  R   A LLL  M+     P   ++N LI+G  
Sbjct: 286 ILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFF 345

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G++  A  + + M  +   P+  TY  LI G C  G  D+A  +L  M  +   P+E+
Sbjct: 346 GEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSEL 405

Query: 334 TYGTIINGLVK---LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           TY  ++NG  K   LG A+D  + L S   R   +N  +Y+ LI G  + G+   A ++ 
Sbjct: 406 TYSALLNGYCKHSKLGPALDLIKYLRS---RSISINRTMYTILIDGFCQLGEVSKAKQIL 462

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           K M+  G  P+ + YSALI+G+C++G   E +EIL  M  +G   N   Y++L+  F ++
Sbjct: 463 KCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKA 522

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVL-------------------------------- 478
           G   +A++ + D+ ++  V N V ++ L                                
Sbjct: 523 GHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASF 582

Query: 479 ---IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
              I   C+ G + EA  V+  M+  G  PD+  Y S++ GLC  G + +A +    +  
Sbjct: 583 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFM--VYL 640

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
           LE     D  T N LL  +CK   +  ++DL   M+ R   PD  T  I L         
Sbjct: 641 LEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILL--------- 691

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             DG            KR +      ++++ML+K L P T  +  ++  L    +++AA
Sbjct: 692 --DG----------FCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAA 738



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 155/582 (26%), Positives = 264/582 (45%), Gaps = 69/582 (11%)

Query: 85   TFYSLIQHYANSGDFKSLEMVLYRMRREKRV---VLEKSFIFIFKAYGKAHLVEEAIRLF 141
            T+ +LI      G     + +L RM++   +   VL  + +F F   G A   +EA++ F
Sbjct: 476  TYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHA---KEALKYF 532

Query: 142  HTMVDEFHCKRTVKSF--NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
               VD +       S   N++L    +EG+   A +F  ++     M I  +  +FN +I
Sbjct: 533  ---VDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYM---SRMKISFDVASFNCII 586

Query: 200  KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             + C+ G V  A  ++  M      PDI TY +L+ GLC+   L +A   +  +    C 
Sbjct: 587  DSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACA 646

Query: 260  PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
                T N L+ G+CK+G L  A  L + M  +  LP+  TY  L+ G C +G +  A+ L
Sbjct: 647  IDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALIL 706

Query: 320  LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA--------------------------- 352
            L  M+    +P+ + Y  ++NGLV  G+    +                           
Sbjct: 707  LQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYL 766

Query: 353  ---------RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
                     R++ +M E + + +   Y+ L+ G  K+G+    + L++ M+++G KP+ V
Sbjct: 767  KGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNV 826

Query: 404  VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW--- 460
             Y  LI GLC  G  + A + L +M+  G   +   +  L+K F E  K   A++++   
Sbjct: 827  TYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYM 886

Query: 461  -------------KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
                         +DM     V +EV  S ++ GLC+ GK+ EA +V++ ++  G  P +
Sbjct: 887  KWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTI 946

Query: 508  VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
              +++++HGLC    +++A  L   M     K   DV TYN+L+  LC +  I  ++DL 
Sbjct: 947  ATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKV--DVVTYNVLITGLCNKKCICDALDLY 1004

Query: 568  NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
              M  +G  P+ +T  I LT         QDG   L ++  R
Sbjct: 1005 EEMKSKGLLPN-ITTYITLTGAMYATGTMQDGEKLLKDIEDR 1045



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 160/630 (25%), Positives = 280/630 (44%), Gaps = 110/630 (17%)

Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV---- 181
           KA+GK      A+R+  ++V +    R    +   +++++Q  +  +A+    H+     
Sbjct: 85  KAHGKL-----ALRMLDSIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGF 139

Query: 182 --NAKHMNIL--------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
             +A   ++L         N  + +L++    + G V +A      M     +  +++  
Sbjct: 140 SCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCN 199

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF-NVLINGLCKNGELGRAAKLVDNMFL 290
            +++ L   N+ +   L L E  +D  FP  VT  N+++N LC  G+L +A  ++  M  
Sbjct: 200 NILNALVGINKSEYVWLFLKE-SLDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKM-- 256

Query: 291 KGC-LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
           K C LPN VTYNT+++    KG    A+ +LD M  +    +  TY  +I+ L KL R+ 
Sbjct: 257 KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSA 316

Query: 350 DGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
               +L  M E     +E  Y+TLI G F EGK   A+ ++ QM+ +  KP+   Y+ALI
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALI 376

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           DG CR G+ DEA  +L+EM   G   +  TYS+L+ G+ +  K   A+++ K +   +  
Sbjct: 377 DGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSIS 436

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN---------- 519
            N   Y++LI G C+ G++ +A+ +   ML+ G  PDV+ YS++I+G+C           
Sbjct: 437 INRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 496

Query: 520 -------------------------AGSVEEALKLF---------------NEMLCL--- 536
                                    AG  +EALK F               N +LC    
Sbjct: 497 LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYR 556

Query: 537 ---------------EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD--- 578
                            K   DV ++N ++++ C++ N+  +  + ++M+  G  PD   
Sbjct: 557 EGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICT 616

Query: 579 -------------LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
                        LV    F+  L EK  A  + T  LN L + + K         + E 
Sbjct: 617 YGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKT--LNTLLVGICKHGTLDEALDLCEK 674

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           M+ + + P T T+  ++   C+  ++  A+
Sbjct: 675 MVTRNILPDTYTYTILLDGFCKRGKVVPAL 704



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 139/613 (22%), Positives = 270/613 (44%), Gaps = 55/613 (8%)

Query: 83  DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
           + ++ +LI  +   G       +  +M R+       ++  +   Y +    +EA R+ +
Sbjct: 334 ECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLY 393

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            M      + +  +++++LN   +      AL+   ++   +  +I  N   + ++I   
Sbjct: 394 EM-QITGVRPSELTYSALLNGYCKHSKLGPALDLIKYL---RSRSISINRTMYTILIDGF 449

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+LG V  A Q+ + M     +PD+ TY  L++G+CK   + E   +L  MQ  G  P  
Sbjct: 450 CQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNN 509

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL------------------- 303
           V +  L+   CK G    A K   +++  G + N V +N L                   
Sbjct: 510 VLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQY 569

Query: 304 ----------------IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                           I   C +GN+ +A S+ D MV     P+  TYG+++ GL + G 
Sbjct: 570 MSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGH 629

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
            V     ++ + E+   ++E   +TL+ G+ K G  ++A+ L ++M+ +   P+T  Y+ 
Sbjct: 630 LVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTI 689

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           L+DG C+ GK   A  +L  M+  G   +   Y+ L+ G    G+   A  +++++    
Sbjct: 690 LLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 749

Query: 468 CVYNE-VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
            +Y + + Y+ +++G  + G++ E   +   M      P   +Y+ ++HG    G +   
Sbjct: 750 GLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRT 809

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           L L+ +M+  +   +PD  TY +L+  LC+   I  ++  L  M+  G  PD +  +I +
Sbjct: 810 LYLYRDMV--KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILI 867

Query: 587 TALKEKLEAPQDGTDFLNELAIRLFKRQR----TSGGFKIVEVMLQKFLSPQTSTWERVV 642
            A  EK +            A++LF   +      G F++ E M    + P       +V
Sbjct: 868 KAFSEKSKMSN---------ALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIV 918

Query: 643 QELCRPKRIQAAI 655
           + LC+  +++ AI
Sbjct: 919 RGLCKCGKVEEAI 931



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/566 (23%), Positives = 249/566 (43%), Gaps = 67/566 (11%)

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
            K   +A+L+ + +R  +   DE  C     S+N++++    EG  + A+  +N ++   
Sbjct: 312 LKRSARAYLLLKRMREVNLTPDE--C-----SYNTLIHGFFGEGKINLAIYIFNQML--- 361

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
             ++ P+  T+  +I   CR G  D A ++  EM +    P   TY  L++G CK ++L 
Sbjct: 362 RQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLG 421

Query: 245 EAV-------------------LLLDE----------------MQVDGCFPTPVTFNVLI 269
            A+                   +L+D                 M  DG  P  +T++ LI
Sbjct: 422 PALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALI 481

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           NG+CK G +    +++  M   G LPN V Y TL+   C  G+  +A+     +  S  +
Sbjct: 482 NGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLV 541

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
            N V +  ++    + G   +  +    M   K   +   ++ +I    + G   +A  +
Sbjct: 542 ANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSV 601

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +  M+  G  P+   Y +L+ GLC+ G   +A+E +  ++   CA +  T ++L+ G  +
Sbjct: 602 YDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICK 661

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            G   +A+++ + M   N + +   Y++L+ G C+ GK+  A ++   ML +G  PD +A
Sbjct: 662 HGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIA 721

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ +++GL N G V+ A  +F E++C E     D   YN ++N   K   I+    L+ +
Sbjct: 722 YTCLLNGLVNEGQVKAASYMFQEIICKE-GLYADCIAYNSMMNGYLKGGQINEIERLMRN 780

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQK 629
           M +    P   + NI +                         K+ + S    +   M+++
Sbjct: 781 MHENEVYPSSASYNILMHG---------------------YIKKGQLSRTLYLYRDMVKE 819

Query: 630 FLSPQTSTWERVVQELCRPKRIQAAI 655
            + P   T+  ++  LC    I+ A+
Sbjct: 820 GIKPDNVTYRLLIFGLCEYGLIEIAV 845



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 186/427 (43%), Gaps = 57/427 (13%)

Query: 131  AHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
             HLV+   + F   + E  C    K+ N++L  I + G    AL+    +V     NILP
Sbjct: 628  GHLVQA--KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTR---NILP 682

Query: 191  NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL------------- 237
            +T T+ +++   C+ G V  A+ L + M  +   PD   Y  L++GL             
Sbjct: 683  DTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMF 742

Query: 238  ----CKEN-------------------RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
                CKE                    +++E   L+  M  +  +P+  ++N+L++G  K
Sbjct: 743  QEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIK 802

Query: 275  NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
             G+L R   L  +M  +G  P+ VTY  LI GLC  G ++ AV  L++MV     P+ + 
Sbjct: 803  KGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLA 862

Query: 335  YGTIINGLV---KLGRA------------VDGARVLM-SMEERKFHVNEYIYSTLISGLF 378
            +  +I       K+  A            +DGA  L   M+      +E   S+++ GL 
Sbjct: 863  FDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLC 922

Query: 379  KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
            K GK E+A+ ++  +M  G  P    ++ L+ GLC+  K D+A  +   M + G   +  
Sbjct: 923  KCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVV 982

Query: 439  TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
            TY+ L+ G         A++++++M     + N   Y  L   +   G +++   +   +
Sbjct: 983  TYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 1042

Query: 499  LSRGCKP 505
              RG  P
Sbjct: 1043 EDRGIVP 1049



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 132/294 (44%), Gaps = 20/294 (6%)

Query: 124  IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
            +   Y K   + E  RL   M  E     +  S+N +++  I++G   R L  Y  +V  
Sbjct: 761  MMNGYLKGGQINEIERLMRNM-HENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKE 819

Query: 184  KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                I P+ +T+ L+I  +C  GL++ A++   +M +    PD   +  L+    +++++
Sbjct: 820  ---GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKM 876

Query: 244  DEAVLLLDEMQ----VDGCF------------PTPVTFNVLINGLCKNGELGRAAKLVDN 287
              A+ L   M+    +DG F            P+ V  + ++ GLCK G++  A  +  +
Sbjct: 877  SNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSS 936

Query: 288  MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
            +   G +P   T+ TL+HGLC +  +D A  L   M +     + VTY  +I GL     
Sbjct: 937  IMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKC 996

Query: 348  AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
              D   +   M+ +    N   Y TL   ++  G  +D  KL K + ++G  P+
Sbjct: 997  ICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 186/338 (55%), Gaps = 1/338 (0%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           +  + R G ++   +    M  R   PDI    +L+ G CK  +  +A  +++ ++  G 
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
            P  +T+NVLI+G+C  G    A KL+ +M  +GC P+ VT+N LI+ LC KG L +A+ 
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +L++M    C PN ++Y  +++G  K  +       L  M  R  + +   Y+TL++ L 
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K+GK + A++L  Q+  KGC P  + Y+ +IDGL +VGK D+A ++L EM   G   +  
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TYSSL+ G    GK  +A++ + D+       N + Y+ ++ GLC+  K   A      M
Sbjct: 331 TYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYM 390

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           + RGCKP   +Y+ +I GL   G  +EAL+L NE LCL
Sbjct: 391 VQRGCKPTEASYTILIEGLAYEGLAKEALELLNE-LCL 427



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/345 (32%), Positives = 184/345 (53%), Gaps = 3/345 (0%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           N+ L+ +++ G       F   +V   +   +P+ +    +I+  C++G    A ++   
Sbjct: 88  NNNLSKLVRNGELEEGFRFLESMV---YRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           +      PD+ TY  L+ G+C   R  +A  LL +M   GC P+ VTFN+LIN LC+ G 
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           LGRA  +++ M   GC PN ++YN L+HG C +  +++A+  L +M +  C P+ VTY T
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           ++  L K G+      +L  +  +        Y+T+I GL K GK + A KL  +M  KG
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            KP+ + YS+L+ GL R GK DEA +   ++   G   NA TY+++M G  ++ K  +A+
Sbjct: 325 LKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAI 384

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           +    M +  C   E  Y++LI GL  +G  +EA  +  ++  RG
Sbjct: 385 DFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRG 429



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 182/336 (54%), Gaps = 16/336 (4%)

Query: 134 VEEAIRLFHTMV------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           +EE  R   +MV      D   C   ++ F  +       G   +A      I ++    
Sbjct: 100 LEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKI-------GKTRKATRIMEIIEDS---G 149

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
            +P+ +T+N++I  +C  G   +A +L  +M  R C P + T+  L++ LC++  L  A+
Sbjct: 150 AVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAI 209

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            +L++M   GC P  +++N L++G CK  ++ RA + +  M  +GC P+ VTYNTL+  L
Sbjct: 210 DVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTAL 269

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G +D AV LL+++ +  C P  +TY T+I+GL K+G+    A++L  M  +    + 
Sbjct: 270 CKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDI 329

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             YS+L+ GL +EGK ++A+K +  +   G KPN + Y+A++ GLC+  K D A + L  
Sbjct: 330 ITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAY 389

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           M+  GC     +Y+ L++G    G   +A+E+  ++
Sbjct: 390 MVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 105/341 (30%), Positives = 187/341 (54%), Gaps = 3/341 (0%)

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           ++ L +NGEL    + +++M  +G +P+ +   +LI G C  G   KA  +++ +  S  
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
           +P+ +TY  +I+G+   GR +D  ++L  M  R    +   ++ LI+ L ++G    A+ 
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           + ++M + GC PN++ Y+ L+ G C+  K + A E L +M + GC  +  TY++L+    
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           + GK   AVE+   ++   C    + Y+ +I GL + GK  +A  +  +M ++G KPD++
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            YSS++ GL   G V+EA+K F+++  L  K  P+  TYN ++  LCK      +ID L 
Sbjct: 331 TYSSLVGGLSREGKVDEAIKFFHDLEVLGVK--PNAITYNAIMLGLCKARKTDRAIDFLA 388

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            M+ RGC P   +  I +  L  +  A ++  + LNEL +R
Sbjct: 389 YMVQRGCKPTEASYTILIEGLAYEGLA-KEALELLNELCLR 428



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 176/341 (51%), Gaps = 8/341 (2%)

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
           L +   L+E    L+ M   G  P  +    LI G CK G+  +A ++++ +   G +P+
Sbjct: 94  LVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPD 153

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK---LGRAVDGAR 353
            +TYN LI G+C  G    A  LL  MV   C P+ VT+  +IN L +   LGRA+D   
Sbjct: 154 VITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID--- 210

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           VL  M +     N   Y+ L+ G  KE K E A++   +M  +GC P+ V Y+ L+  LC
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           + GK D A E+L ++ + GC+    TY++++ G  + GK  +A ++  +M       + +
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDII 330

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            YS L+ GL  +GK+ EA   +  +   G KP+ + Y++++ GLC A   + A+     M
Sbjct: 331 TYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYM 390

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +  +   +P   +Y IL+  L  +     +++LLN +  RG
Sbjct: 391 V--QRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRG 429



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 25/179 (13%)

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           LI G C+ GK R+A  +   +   G  PDV+ Y+ +I G+C+ G   +A KL  +M+   
Sbjct: 125 LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMV--R 182

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAP 596
               P V T+NIL+N LC++  +  +ID+L  M   GC P+ ++ N  L    KEK    
Sbjct: 183 RGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKM-- 240

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                   E AI    +  + G +            P   T+  ++  LC+  ++ AA+
Sbjct: 241 --------ERAIEYLGKMTSRGCY------------PDIVTYNTLLTALCKDGKVDAAV 279


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 201/399 (50%), Gaps = 3/399 (0%)

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A+  F  M +    P  + +  ++  L K       + L  + Q +G  P   T N+LIN
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
             C    +  A  +  N+  +G  P+ +T NTLI GLC  G + +A+   D++VA     
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL 196

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           ++V+YGT+INGL K G     AR+L  +E      +  +Y+T+I  L K  +  DA  L+
Sbjct: 197 DQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLY 256

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
            +M+ KG  PN   Y+ LI G C +G   EA  +L EM       + +T++ L+    + 
Sbjct: 257 SEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKE 316

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           GK  +A+ ++++M   N   N V Y+ LI GLC++  L  A  +  +M  +G +PDV +Y
Sbjct: 317 GKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSY 376

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + ++  LC  G +E A + F  +L        +V TYN+++N LCK       +DL + M
Sbjct: 377 TILLDALCKGGRLENAKQFFQHLLV--KGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM 434

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
             +GC PD +T    + AL EK E  +    FL E+  R
Sbjct: 435 EGKGCMPDAITFKTIICALFEKDENDK-AEKFLREMIAR 472



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 184/378 (48%), Gaps = 3/378 (0%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F+++L+ +++   Y   +  +      +   + PN  T N++I   C L  +  A  +F 
Sbjct: 96  FDNILSSLVKNKHYLTVISLFKQF---QSNGVTPNLCTLNILINCFCHLAHITFAFSVFA 152

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            +  R   PD  T  TL+ GLC    +  A+   D++   G     V++  LINGLCK G
Sbjct: 153 NILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAG 212

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           E    A+L+  +      P+ V Y T+IH LC    +  A  L   M+     PN  TY 
Sbjct: 213 ETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYN 272

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+I G   +G   +   +L  M+ +  + + Y ++ LI  L KEGK ++A+ L+++M  K
Sbjct: 273 TLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHK 332

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
              PN V Y++LIDGLC+    + A  +  +M   G   + ++Y+ L+    + G+   A
Sbjct: 333 NMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENA 392

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            + ++ +       N   Y+V+I+GLC+ G   +   + ++M  +GC PD + + ++I  
Sbjct: 393 KQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICA 452

Query: 517 LCNAGSVEEALKLFNEML 534
           L      ++A K   EM+
Sbjct: 453 LFEKDENDKAEKFLREMI 470



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 183/386 (47%), Gaps = 4/386 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P T  F+ ++ ++ +       I LF++       P++ T   L++  C    +  A  +
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
              +   G  P  +T N LI GLC  GE+ RA    D +  +G   ++V+Y TLI+GLC 
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G       LL ++      P+ V Y TII+ L K  R  D   +   M  +    N + 
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI G    G  ++A  L  +M  K   P+   ++ LID L + GK DEA  +  EM 
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +     N  TY+SL+ G  ++    +A+ + K M +     +   Y++L+  LC+ G+L 
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYN 548
            A+  +  +L +G   +V  Y+ MI+GLC AG   + + L ++M   E K   PD  T+ 
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM---EGKGCMPDAITFK 447

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRG 574
            ++ AL ++     +   L  M+ RG
Sbjct: 448 TIICALFEKDENDKAEKFLREMIARG 473



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 4/210 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +   G+ K    +L  M+ +       +F  +  A GK   ++EAI LF  M
Sbjct: 270 TYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V ++ S+++ + +     RA+     +   K   I P+  ++ +++  +C+
Sbjct: 330 KHKNMFPNIV-TYTSLIDGLCKNHHLERAIALCKKM---KEQGIQPDVYSYTILLDALCK 385

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++NA Q F+ + V+    ++ TY  +++GLCK     + + L  +M+  GC P  +T
Sbjct: 386 GGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAIT 445

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           F  +I  L +  E  +A K +  M  +G L
Sbjct: 446 FKTIICALFEKDENDKAEKFLREMIARGLL 475


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/517 (28%), Positives = 250/517 (48%), Gaps = 22/517 (4%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLV 134
           K  +++   S +  +++     G F S++ +L  M+     +     +    +Y K  L 
Sbjct: 79  KQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELY 138

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           EE + +   M  EF        +N +LNV++ +G   + +E  +  + +K   I P+  T
Sbjct: 139 EEILCIVEVMEVEFGLALDTLLYNFLLNVLV-DGNKLKLVENVHSTMVSK--GIKPDVST 195

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           FN++IK +C+   +  AI +  EM      PD  T+ TLM G  +E  +D A  + ++M 
Sbjct: 196 FNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQML 255

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL----------------KGCLPNEV 298
             GC  T VT NVL++G CK G +  A   +D M                  KGC P+E 
Sbjct: 256 DAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEF 315

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TYN LI  LC +G L +A+ LL  M  S C  N +TY T+I+G  K  +  +   +   M
Sbjct: 316 TYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQM 375

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
           E +    N   Y+TLI GL K  + ++A +L  QM+ +G KP+   Y++++   CR G  
Sbjct: 376 EIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDI 435

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
            +A +I+  M +NGC  +  TY +L+ G  ++G+   A  + + +     V     Y+ +
Sbjct: 436 QKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPV 495

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS-VEEALKLFNEMLCLE 537
           I  L +  + +EA  ++ +M  +G  PD   Y  +  GL N+G  + EA+    EM  +E
Sbjct: 496 IQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEM--IE 553

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
               P+  ++ +L   LC  S     I L++ +M++ 
Sbjct: 554 KGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKA 590



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 221/425 (52%), Gaps = 23/425 (5%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           STF  LI+    +   +   +V+  M     V  EK+F  + + + +   ++ A R+   
Sbjct: 194 STFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQ 253

Query: 144 MVD--------------EFHCKR-TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           M+D                 CK   ++   S ++ +  EG +  A+E YN +   K+   
Sbjct: 254 MLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEM---KNKGC 310

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P+  T+N++I ++C  G +  A+ L REM +  C  ++ TY TL+DG CK  +++EA  
Sbjct: 311 QPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEE 370

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           + D+M++ G     VT+N LI+GLCK+  +  AA+L+D M ++G  P++ TYN+++   C
Sbjct: 371 IFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFC 430

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +G++ KA  ++  M ++ C P+ VTYGT+I GL K GR    +R+L S++ +   +  +
Sbjct: 431 REGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPH 490

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP-DEAEEILFE 427
            Y+ +I  LFK  + ++AM+L+++M EKG  P+   Y  +  GL   G P  EA + + E
Sbjct: 491 AYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIE 550

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK-DMAKNNCVYNEVCYSVLIHGLCEDG 486
           MI  G      ++  L +G          +++    M K N   NEV   V+I G  +  
Sbjct: 551 MIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKANFSQNEV---VMIRGFLKIR 607

Query: 487 KLREA 491
           K ++A
Sbjct: 608 KFQDA 612



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 232/481 (48%), Gaps = 42/481 (8%)

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           +K  N  PN+  +  +++ + ++G  ++   + +EM   +C+ D       +D   K   
Sbjct: 78  SKQPNFRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFEL 137

Query: 243 LDEAVLLLDEMQVD-GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
            +E + +++ M+V+ G     + +N L+N L    +L     +   M  KG  P+  T+N
Sbjct: 138 YEEILCIVEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFN 197

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMSMEE 360
            LI  LC    +  A+ +++ M +   +P+E T+ T++ G ++ G  +DGA RV   M +
Sbjct: 198 ILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGN-MDGAFRVKEQMLD 256

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAM----------------KLWKQMMEKGCKPNTVV 404
               V     + L+ G  KEG+ E+A+                +L+ +M  KGC+P+   
Sbjct: 257 AGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFT 316

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ LID LC  GK  EA  +L EM  +GCA N  TY++L+ GF ++ K  +A EI+  M 
Sbjct: 317 YNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQME 376

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
                 N V Y+ LI GLC+  +++EA  +  QM+  G KPD   Y+SM+   C  G ++
Sbjct: 377 IQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQ 436

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           +A  +   M       +PD+ TY  L+  LCK   +  +  LL S+  +G    ++T + 
Sbjct: 437 KAADIVQTM--TSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGM---VLTPHA 491

Query: 585 FLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQE 644
           +                  N +   LFKR+RT    ++   M +K  +P   T++ V + 
Sbjct: 492 Y------------------NPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRG 533

Query: 645 L 645
           L
Sbjct: 534 L 534



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 163/379 (43%), Gaps = 40/379 (10%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN   Y  ++  L   G+ +    +L  M    C  +       I+   K     +   +
Sbjct: 85  PNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCI 144

Query: 355 LMSME-ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           +  ME E    ++  +Y+ L++ L    K +    +   M+ KG KP+   ++ LI  LC
Sbjct: 145 VEVMEVEFGLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALC 204

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           +  +   A  ++ EM + G   +  T+++LM+GF E G    A  + + M    C    V
Sbjct: 205 KAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNV 264

Query: 474 CYSVLIHGLCEDGKLREARM----------------VWTQMLSRGCKPDVVAYSSMIHGL 517
             +VL+HG C++G++ EA                  ++ +M ++GC+PD   Y+ +I  L
Sbjct: 265 TVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSL 324

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C  G ++EAL L  EM         +V TYN L++  CK   I  + ++ + M  +G   
Sbjct: 325 CYRGKLQEALGLLREMEI--SGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSR 382

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           + VT N  +           DG          L K +R     ++++ M+ + L P   T
Sbjct: 383 NSVTYNTLI-----------DG----------LCKSRRVQEAAQLMDQMIMEGLKPDKFT 421

Query: 638 WERVVQELCRPKRIQAAIN 656
           +  ++   CR   IQ A +
Sbjct: 422 YNSMLTYFCREGDIQKAAD 440


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 228/466 (48%), Gaps = 43/466 (9%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHM---NILPNTLTFNLVIKTVCRLGLVDNAI 212
           +FN     I+ +GL  R LEF   +   + M   +++P+ +++N VI+  C    ++ A+
Sbjct: 139 AFNVYNYNILLKGLC-RNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKAL 197

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           QL  EM    C   + T+  L+D  CK  ++DEA+ LL EM+  G     + +  LI G 
Sbjct: 198 QLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGF 257

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C  GEL R   L D +  +G  P  +TYNTLI G C  G L +A  + + M+     PN 
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNV 317

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            TY  +I+GL  +G+  +  ++L  M ++    N   Y+ +I+ L K+    DA+++ + 
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVEL 377

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC------------------- 433
           M ++  +P+ + Y++L+ GLC  G  DEA ++L+ M+ +                     
Sbjct: 378 MKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKG 437

Query: 434 ------------------AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
                             A +  T + L+    +SG  +KA+E+WK ++ +  V N   Y
Sbjct: 438 NRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTY 497

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + +I G C+ G L  A+ +  +M      P V  Y+ ++  LC  G++++A +LF EM  
Sbjct: 498 TTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEM-- 555

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
               S PDV ++NI+++   K  +I  +  LL  M   G  PDL T
Sbjct: 556 QRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFT 601



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 244/522 (46%), Gaps = 50/522 (9%)

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
           +GKA  +   +R    M D       V S+N+V+    +     +AL+  N +  +    
Sbjct: 158 FGKAVSLLREMRQNSLMPD-------VVSYNTVIRGFCEGKELEKALQLANEMQGS---G 207

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
              + +T+ ++I   C+ G +D A+ L +EM  +  E D+  Y +L+ G C    LD   
Sbjct: 208 CSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGK 267

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L DE+   G  P  +T+N LI G CK G L  A+++ + M  +G  PN  TY  LI GL
Sbjct: 268 ALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGL 327

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G   +A+ LL+ M+     PN VTY  IIN L K     D   ++  M++R+   + 
Sbjct: 328 CGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDN 387

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKG--CKPNTVVYSALIDGLCRVGKPDEAEEIL 425
             Y++L+ GL  +G  ++A KL   M++      P+ + ++ALI GLC+  +  +A +I 
Sbjct: 388 ITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIY 447

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             ++    A +  T + L+    +SG  +KA+E+WK ++ +  V N   Y+ +I G C+ 
Sbjct: 448 DLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKT 507

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML----------- 534
           G L  A+ +  +M      P V  Y+ ++  LC  G++++A +LF EM            
Sbjct: 508 GMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISF 567

Query: 535 ---------CLEPKS-------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
                      + KS              PD+FTY+ L+N   K   +  +I   + M+D
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMID 627

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ 614
            G +PD   C+  L     K    Q  TD L E   +L  + 
Sbjct: 628 SGFEPDAHICDSVL-----KYCISQGETDKLTEFVKKLVDKD 664



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/390 (29%), Positives = 206/390 (52%), Gaps = 21/390 (5%)

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N+L+ GLC+N E G+A  L+  M     +P+ V+YNT+I G C    L+KA+ L + M 
Sbjct: 145 YNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQ 204

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            S C  + VT+G +I+   K G+  +   +L  M+ +    +  +Y++LI G    G+ +
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELD 264

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
               L+ +++E+G  P  + Y+ LI G C++G+  EA EI   M+  G   N +TY+ L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLI 324

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G    GK  +A+++   M + +   N V Y+++I+ LC+D  + +A  +   M  R  +
Sbjct: 325 DGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTR 384

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PD + Y+S++ GLC  G ++EA KL   ML     + PDV ++N L++ LCK + +  ++
Sbjct: 385 PDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQAL 444

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
           D+ + ++++    D+VT NI L +  +  +  +         A+ L+K+   S   KIV 
Sbjct: 445 DIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNK---------AMELWKQISNS---KIV- 491

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   P + T+  ++   C+   +  A
Sbjct: 492 --------PNSDTYTTMIDGFCKTGMLNVA 513



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 233/464 (50%), Gaps = 9/464 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A+ KA  ++EA+ L   M  +   +  +  + S++      G   R    ++ ++  
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHK-GLEADLIVYTSLIRGFCDCGELDRGKALFDEVLER 276

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P  +T+N +I+  C+LG +  A ++F  M  R   P++YTY  L+DGLC   + 
Sbjct: 277 GDS---PCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA+ LL+ M      P  VT+N++IN LCK+  +  A ++V+ M  +   P+ +TYN+L
Sbjct: 334 KEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSL 393

Query: 304 IHGLCLKGNLDKAVSLLDRMV--ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           + GLC KG+LD+A  LL  M+  +S   P+ +++  +I+GL K  R      +   + E+
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEK 453

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               +    + L++   K G    AM+LWKQ+      PN+  Y+ +IDG C+ G  + A
Sbjct: 454 LGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVA 513

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
           + +L +M  +    + F Y+ L+    + G   +A  ++++M +++   + + ++++I G
Sbjct: 514 KGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDG 573

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
             + G ++ A  +   M   G  PD+  YS +I+     G ++EA+  F++M  ++   +
Sbjct: 574 SLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM--IDSGFE 631

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL-VTCNI 584
           PD    + +L     Q       + +  ++D+    D  +TC +
Sbjct: 632 PDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTV 675



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 210/450 (46%), Gaps = 63/450 (14%)

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           NA+ +F++  V +     +    LM  L +    + A     +M     F   V+ + L+
Sbjct: 56  NAVSVFQQ-AVDSGGSLSFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLL 114

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
               +  + G A  ++  M  +G   N   YN L+ GLC      KAVSLL  M  +  M
Sbjct: 115 ECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLM 174

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA-EDAMK 388
           P+ V+Y T+I G                                    F EGK  E A++
Sbjct: 175 PDVVSYNTVIRG------------------------------------FCEGKELEKALQ 198

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L  +M   GC  + V +  LID  C+ GK DEA  +L EM + G  A+   Y+SL++GF 
Sbjct: 199 LANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFC 258

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           + G+  +   ++ ++ +       + Y+ LI G C+ G+L+EA  ++  M+ RG +P+V 
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVY 318

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +I GLC  G  +EAL+L N M  L+   +P+V TYNI++N LCK S ++ +++++ 
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLM--LQKDEEPNVVTYNIIINKLCKDSLVADALEIVE 376

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
            M  R   PD +T N  L  L  K +        L+E +             K++ +ML+
Sbjct: 377 LMKKRRTRPDNITYNSLLGGLCAKGD--------LDEAS-------------KLLYLMLK 415

Query: 629 --KFLSPQTSTWERVVQELCRPKRIQAAIN 656
              +  P   ++  ++  LC+  R+  A++
Sbjct: 416 DSSYTDPDVISFNALIHGLCKGNRLHQALD 445



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 188/436 (43%), Gaps = 41/436 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + SLI+ + + G+    + +   +          ++  + + + K   ++EA  +F  M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFM 308

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           + E   +  V ++  +++ +   G    AL+  N ++        PN +T+N++I  +C+
Sbjct: 309 M-ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEE---PNVVTYNIIINKLCK 364

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP-- 262
             LV +A+++   M  R   PD  TY +L+ GLC +  LDEA  LL  M  D  +  P  
Sbjct: 365 DSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424

Query: 263 VTFNVLINGLCKNGELGRAAKLVD--------------NMFLKGCL-------------- 294
           ++FN LI+GLCK   L +A  + D              N+ L   L              
Sbjct: 425 ISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQ 484

Query: 295 -------PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                  PN  TY T+I G C  G L+ A  LL +M  S+  P+   Y  +++ L K G 
Sbjct: 485 ISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGT 544

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                R+   M+      +   ++ +I G  K G  + A  L   M   G  P+   YS 
Sbjct: 545 LDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSK 604

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LI+   ++G  DEA     +MI++G   +A    S++K     G+  K  E  K +   +
Sbjct: 605 LINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKD 664

Query: 468 CVYNEVCYSVLIHGLC 483
            V ++     ++  +C
Sbjct: 665 VVLDKELTCTVMDYMC 680



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/294 (25%), Positives = 151/294 (51%), Gaps = 5/294 (1%)

Query: 134 VEEAIRLFHTMV-DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           ++EA +L + M+ D  +    V SFN++++ + +    H+AL+ Y+ +V         + 
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAG---DI 459

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T N+++ +  + G V+ A++L++++      P+  TY T++DG CK   L+ A  LL +
Sbjct: 460 VTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCK 519

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M++    P+   +N L++ LCK G L +A +L + M      P+ +++N +I G    G+
Sbjct: 520 MRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGD 579

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +  A SLL  M  +   P+  TY  +IN  +KLG   +       M +  F  + +I  +
Sbjct: 580 IKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDS 639

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC-RVGKPDEAEEIL 425
           ++     +G+ +   +  K++++K    +  +   ++D +C   G  D A+ +L
Sbjct: 640 VLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLL 693



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 35/312 (11%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK--SFIFIFKAYGKAHLVEEAIRLFH 142
           T+ SL+      GD      +LY M ++         SF  +     K + + +A+ ++ 
Sbjct: 389 TYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYD 448

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK------------------ 184
            +V++      V + N +LN  ++ G  ++A+E +  I N+K                  
Sbjct: 449 LLVEKLGAGDIVTT-NILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKT 507

Query: 185 -HMNIL-------------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
             +N+              P+   +N ++ ++C+ G +D A +LF EM   +  PD+ ++
Sbjct: 508 GMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISF 567

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             ++DG  K   +  A  LL  M   G  P   T++ LIN   K G L  A    D M  
Sbjct: 568 NIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMID 627

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            G  P+    ++++     +G  DK    + ++V    + ++    T+++ +      +D
Sbjct: 628 SGFEPDAHICDSVLKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMD 687

Query: 351 GARVLMSMEERK 362
            A+ L+ + + K
Sbjct: 688 IAKRLLRVADDK 699



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 103/258 (39%), Gaps = 17/258 (6%)

Query: 412 LCRVGKPDEAEEI-LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           LC    P     + +F+   +   + +F  ++LM     S     A   ++ M + +   
Sbjct: 46  LCEDSNPQLKNAVSVFQQAVDSGGSLSFAGNNLMATLVRSRNHEVAFSFYRKMLETDTFI 105

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N V  S L+    +  K   A  V   ML RG   +V  Y+ ++ GLC      +A+ L 
Sbjct: 106 NFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLL 165

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA-- 588
            EM   +    PDV +YN ++   C+   +  ++ L N M   GC   LVT  I + A  
Sbjct: 166 REM--RQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFC 223

Query: 589 -----------LKEKLEAPQDGTDFLNELAIRLF-KRQRTSGGFKIVEVMLQKFLSPQTS 636
                      LKE      +    +    IR F        G  + + +L++  SP   
Sbjct: 224 KAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283

Query: 637 TWERVVQELCRPKRIQAA 654
           T+  +++  C+  R++ A
Sbjct: 284 TYNTLIRGFCKLGRLKEA 301


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 239/489 (48%), Gaps = 7/489 (1%)

Query: 111 REKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY 170
           R+  V  + ++  + +   +  + E+A  L   M D      T   FN V+  ++ + L+
Sbjct: 310 RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPST-NEFNMVIKGLLNDKLW 368

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
             A+  +  + ++     +P+  T+N++I  +C+   +  A+ L+ +M     +P I TY
Sbjct: 369 KDAVSLFKEMADSG----IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTY 424

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +L+   C    +DEAV L  EM   G  P  VT+  L+ G        +A  L+  M  
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            G   N+ TYNTLI+GLC+ G + +   +L R      +P  +TY +IING +K G    
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS 544

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              V   M  +    N   Y++ I G  K    + A+K+   +  KG +P+   Y++LI 
Sbjct: 545 AFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIF 604

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G C+ G    A ++L  M+ +G   N   Y+S + G+       +A+ +++ M K     
Sbjct: 605 GFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDL 664

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +   Y+ LI G  +DG +  A  ++++M+++G  PD + ++++ HGLC  G +++A KL 
Sbjct: 665 DTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLL 724

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           +EM  L+ +  P+V  YN+L+N   +   +  +  L + M++R   PD  T +I +    
Sbjct: 725 DEMNRLDIR--PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKS 782

Query: 591 EKLEAPQDG 599
              ++P D 
Sbjct: 783 LGSDSPIDA 791



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 222/469 (47%), Gaps = 41/469 (8%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F+ V+    +EG+Y  A+  ++ +  ++   I P+    ++ I ++C+L   + A+ + R
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASE---IEPDQRVCSVAIASLCKLRDANRALLVLR 236

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M      P  +T+ +++D L K  R++EA+ + DE+   G   + V    L++G C   
Sbjct: 237 KMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQR 296

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           E+ +A  + +     G +P +VTY  LI G   +G  +KA  L  +M     +P+   + 
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN 356

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +I GL+      D   +   M +     + + Y+ LI  L +  K  +A+ LW++M E 
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNET 415

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G KP  V Y +L+   C  G  DEA ++  EM   G   N  TY++LMKG        KA
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE-------------------------- 490
             +  +M +N    N+  Y+ LI+GLC  G++ E                          
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535

Query: 491 ---------ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
                    A  V+ QM ++G  P++V Y+S I G C     + ALK+ N++ C     +
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC--KGLR 593

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           PD+  YN L+   C++ N+SH++ +L  M+  G  P++   N F+T  K
Sbjct: 594 PDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYK 642



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 59/299 (19%)

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M  +   ++ +++  ++   FKEG  +DA++L+ +M     +P+  V S  I  LC++  
Sbjct: 168 MRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            + A  +L +M + G     FT++S++                                V
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVV-------------------------------DV 256

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           L+ G    G++ EA  +  ++L+ G K  VV  ++++HG C    V +AL +F E   L 
Sbjct: 257 LVKG----GRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEE--TLR 310

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               P   TY +L+    ++     + +L   M D G  P     N+ +  L        
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL------- 363

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              D L + A+ LFK    SG              P   T+  ++  LC+ ++I+ A+N
Sbjct: 364 --NDKLWKDAVSLFKEMADSG-------------IPDAFTYNILIHWLCQRRKIREALN 407


>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
 gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
          Length = 948

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 143/468 (30%), Positives = 224/468 (47%), Gaps = 25/468 (5%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P  +T+N ++   C+ G    A  L   M  +  E D+ TY  L+D LCK NR  +  L
Sbjct: 7   VPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYL 66

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LL +M+     P   T+N LINGL K  ++G A ++ + M +    PN VTYN LI G C
Sbjct: 67  LLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGHC 126

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             GN ++A+ LLD M A    P+EV YG +++GL KL +  D A+ LM        V  Y
Sbjct: 127 DCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAK-FDIAKSLMERIRMSGMVVGY 185

Query: 369 -IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+ +I GL K G  +++++L   M + G  P+ + +S LI+G C+ GK   A+E++ +
Sbjct: 186 RAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICK 245

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M   G A N   Y++L+    + G   +A   +  M +     +    +VLI  LC  G+
Sbjct: 246 MFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGR 305

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           + EA      M +    P+ + +  +I+G    G   +A  +F+EM+ L     P  FTY
Sbjct: 306 VAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKL--GHCPSHFTY 363

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
             LL  LCK  N+  +  LL  +      P  V  NI+ T L E                
Sbjct: 364 GSLLKGLCKGGNLREAKKLLYKLHHI---PAAVDTNIYNTILSETC-------------- 406

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
               KR + S    +   M+Q  + P + T+  ++  L R  ++  A+
Sbjct: 407 ----KRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPAL 450



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 141/535 (26%), Positives = 240/535 (44%), Gaps = 60/535 (11%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T+ ++N++LN   ++G Y  A +  + +   +   I  +  T+N++I  +C+        
Sbjct: 9   TIVTYNTILNWCCKKGRYKAASDLIDRM---ESKGIEADVCTYNMLIDDLCKNNRSAKGY 65

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L ++M  R   P+ +TY TL++GL KE ++  A  + +EM +    P  VT+N+LI+G 
Sbjct: 66  LLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNILIDGH 125

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTL----------------------------- 303
           C  G   +A +L+D M  KG  P+EV Y  L                             
Sbjct: 126 CDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGY 185

Query: 304 ------IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
                 I GLC  G LD+++ LLD M      P+ +T+  +ING  K G+  +   V+  
Sbjct: 186 RAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICK 245

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M +     N  IY+TLI    K+G   +A + +  M   G   +  + + LI  LCR G+
Sbjct: 246 MFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGR 305

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
             EAE+ +  M     A N+ T+  ++ G+   G   KA  ++ +M K     +   Y  
Sbjct: 306 VAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGS 365

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           L+ GLC+ G LREA+ +  ++       D   Y++++   C  G + +A+ LF EM  ++
Sbjct: 366 LLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEM--VQ 423

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               PD  TY I+L  L ++  +  ++      + RG    L    +  T+L        
Sbjct: 424 FNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGT---LSPNKVMYTSL-------F 473

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
           DG          LFK  +++    I E M  K ++P T     V+    R  +++
Sbjct: 474 DG----------LFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKME 518



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 141/618 (22%), Positives = 269/618 (43%), Gaps = 52/618 (8%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +L+   +    F   + ++ R+R    VV  +++  +     K  L++E+++L   M 
Sbjct: 153 YGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMF 212

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
            +      + +F+ ++N   + G    A E    +  A    + PN + +  +I   C+ 
Sbjct: 213 KD-GASPDIITFSVLINGFCKAGKIKNAKEVICKMFKA---GLAPNYVIYATLIYNSCKK 268

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
           G +  A + +  M     + D +    L+  LC+  R+ EA   +  M      P  +TF
Sbjct: 269 GDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGRVAEAEDFMRHMSTIDLAPNSITF 328

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           + +ING    G+  +A  + D M   G  P+  TY +L+ GLC  GNL +A  LL ++  
Sbjct: 329 DCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHH 388

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
                +   Y TI++   K G+  D   +   M +     + + Y+ +++GL ++GK   
Sbjct: 389 IPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVP 448

Query: 386 AMKLWKQMMEKGC-KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           A+  +++ + +G   PN V+Y++L DGL +VG+ + A  I  EM + G   +    ++++
Sbjct: 449 ALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVL 508

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+   GK  K  +++  M   +   +   Y++L+HG  +   L +    +  M   G  
Sbjct: 509 DGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGIS 568

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEML------------------CLEPKSQ----- 541
           PD +   S+I GLC +G ++   K+  +M+                  C   K       
Sbjct: 569 PDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGKAFDL 628

Query: 542 ----------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--- 588
                     PDV TYN +   L + S +  S  LL+ M++RG  P        +     
Sbjct: 629 LNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCR 688

Query: 589 ---------LKEKLEAPQDGT-DFLNELAIR-LFKRQRTSGGFKIVEVMLQKFLSPQTST 637
                    LK+++EA    + D      +R L +  +      +++ MLQK L P  +T
Sbjct: 689 MGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVAT 748

Query: 638 WERVVQELCRPKRIQAAI 655
           +  ++  LC+  ++  A+
Sbjct: 749 FTTLMHMLCKKAKLSEAL 766



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 164/329 (49%), Gaps = 2/329 (0%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M+  G  PT VT+N ++N  CK G    A+ L+D M  KG   +  TYN LI  LC    
Sbjct: 1   MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
             K   LL +M      PNE TY T+INGL+K  +     RV   M       N   Y+ 
Sbjct: 61  SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEMLMLNLSPNRVTYNI 120

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI G    G  E A++L   M  KG +P+ V Y AL+ GL ++ K D A+ ++  +  +G
Sbjct: 121 LIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSG 180

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
                  Y++++ G  + G   +++++   M K+    + + +SVLI+G C+ GK++ A+
Sbjct: 181 MVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAK 240

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            V  +M   G  P+ V Y+++I+  C  G + EA + +  M         D F  N+L++
Sbjct: 241 EVICKMFKAGLAPNYVIYATLIYNSCKKGDITEAFRNYATM--TRTGHDVDYFICNVLIS 298

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +LC+   ++ + D +  M      P+ +T
Sbjct: 299 SLCRAGRVAEAEDFMRHMSTIDLAPNSIT 327



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/508 (25%), Positives = 224/508 (44%), Gaps = 11/508 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  +I  Y   GD      +   M +        ++  + K   K   + EA +L + +
Sbjct: 327 TFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKL 386

Query: 145 VDEFHCKRTVKS--FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
               H    V +  +N++L+   + G    A+  +  +V     N+LP++ T+ +++  +
Sbjct: 387 ---HHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMV---QFNVLPDSHTYAIILAGL 440

Query: 203 CRLGLVDNAIQLFREMPVRNC-EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            R G +  A+  F +   R    P+   Y +L DGL K  + + A  + +EM+  G  P 
Sbjct: 441 SRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPD 500

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            +  N +++G  + G++ +  KL   M      P+  TYN L+HG   K +L K     +
Sbjct: 501 TIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSKKKDLLKCSKFYN 560

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M      P+++T  +II GL K G    G ++L  M      V++   + LI+   +  
Sbjct: 561 IMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETD 620

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           K   A  L       G  P+   Y+A+  GL R     E+  +L +M+  G    +  Y 
Sbjct: 621 KMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYI 680

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           SL+ G    G    A  +  +M        +V  S ++ GL + GK+ EA +V   ML +
Sbjct: 681 SLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQK 740

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
              P V  +++++H LC    + EALKL  +M     K   DV  YN+L++ LC   +  
Sbjct: 741 RLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVK--LDVVAYNVLISGLCADGDAL 798

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
            + +L   M +RG  P+  T    + A+
Sbjct: 799 AAFNLYEEMKERGLWPNTTTYCTLIDAI 826



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 212/482 (43%), Gaps = 35/482 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL++     G+ +  + +LY++      V    +  I     K   + +A+ LF  M
Sbjct: 362 TYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEM 421

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV----------------------- 181
           V +F+      ++  +L  + ++G    AL F+   +                       
Sbjct: 422 V-QFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSPNKVMYTSLFDGLFKVG 480

Query: 182 --NA--------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
             NA        +H  I P+T+  N V+    R+G ++   +LF +M   +  P + TY 
Sbjct: 481 QSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYN 540

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L+ G  K+  L +     + M   G  P  +T + +I GLCK+G L    K++  M ++
Sbjct: 541 ILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIME 600

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
             L +++T N LI   C    + KA  LL+       +P+  TY  I  GL +     + 
Sbjct: 601 DTLVDQLTLNMLITNSCETDKMGKAFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRES 660

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +L  M ER        Y +LI+G+ + G  + A +L  +M   G     V  SA++ G
Sbjct: 661 HLLLHDMLERGITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRG 720

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           L + GK +EA  +L  M+         T+++LM    +  K  +A+++   MA      +
Sbjct: 721 LAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLD 780

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL-CNAGSVEEALKLF 530
            V Y+VLI GLC DG    A  ++ +M  RG  P+   Y ++I  +  N G VEE L ++
Sbjct: 781 VVAYNVLISGLCADGDALAAFNLYEEMKERGLWPNTTTYCTLIDAISTNEGEVEERLLVY 840

Query: 531 NE 532
            E
Sbjct: 841 LE 842


>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
          Length = 547

 Score =  212 bits (540), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 221/430 (51%), Gaps = 18/430 (4%)

Query: 136 EAIRLFHTM-VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
            A+R+F  +         + +S+  V+  + + G +  AL+ ++ +++      LP    
Sbjct: 89  SALRIFSALHSPPLSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQS--GYLPEAGF 146

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           F+ V  +    GL+D A  L  +     C  + Y Y  L++ L    R  +AV L +   
Sbjct: 147 FSFVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWI 206

Query: 255 VDGCF-PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
            DG + P   +FNV+I G+C+ G   +A +LV+ M   GC P+ +T+N L+ GLC    +
Sbjct: 207 QDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQV 266

Query: 314 DKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +K   +L R+     CMPN VTY ++I+G  K G+  D   V   M E     N   Y+ 
Sbjct: 267 NKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNV 326

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LI+G  K    E A+++++Q++ + C P+ V +S+LIDG CR G+ D+A+ I  EM  + 
Sbjct: 327 LINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHH 386

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWK------DMAKNNCVYNEVCYSVLIHGLCEDG 486
              N +T+S ++    +  +  +A++I +      D+A    +YN V     I  LC+ G
Sbjct: 387 IQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPV-----IDILCKGG 441

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           K+ EA ++ T M  +GC PD   Y+ +I G C  G + EA+ LF++M  +E   +PD  T
Sbjct: 442 KVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKM--VEAGCRPDNIT 499

Query: 547 YNILLNALCK 556
            N  ++ + K
Sbjct: 500 VNSFVSCVLK 509



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/413 (29%), Positives = 213/413 (51%), Gaps = 6/413 (1%)

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC-K 239
           +++  +++ P+  ++  VI  +CR G   +A++LF +M  ++       + + + G C  
Sbjct: 97  LHSPPLSVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTN 156

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEV 298
              LD A  LL +    GC   P  +N L+N L  +G    A  L ++    G   P+  
Sbjct: 157 AGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVW 216

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           ++N +I G+C  GN  KA+ L++RM    C P+ +T+  +++GL +  +   G  VL  +
Sbjct: 217 SFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRL 276

Query: 359 EERKFHV-NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           +     + N   Y+++ISG  K GK EDAM ++  M+E G +PNTV Y+ LI+G  +   
Sbjct: 277 QRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALD 336

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            + A  +  ++I   C  +  T+SSL+ G+   G+   A  IWK+M  ++   N   +S+
Sbjct: 337 MESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSI 396

Query: 478 LIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
           +IH LC+  +  EA  +  ++  R    P    Y+ +I  LC  G V+EA  +  +M   
Sbjct: 397 IIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMK-- 454

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           E    PD +TY IL+   C +  I  +I L + M++ GC PD +T N F++ +
Sbjct: 455 EKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCV 507



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 205/406 (50%), Gaps = 9/406 (2%)

Query: 68  EIFNS--TPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI-FI 124
            IF++  +P L S    + ++  +I     SG  +    +  +M  +   + E  F  F+
Sbjct: 92  RIFSALHSPPL-SVPPSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFV 150

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
             +   A L++ A  L  T      C     ++N +LN +I  G    A+  +   +   
Sbjct: 151 AGSCTNAGLLDAASTLL-TKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDG 209

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
             +  P+  +FN+VIK VCR+G    A++L   M    C PD  T+  L+DGLC+  +++
Sbjct: 210 LYS--PDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVN 267

Query: 245 EAVLLLDEMQVDG-CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +   +L  +Q DG C P  VT+  +I+G CK G++  A  + ++M   G  PN VTYN L
Sbjct: 268 KGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVL 327

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I+G     +++ AV +  +++   C P+ VT+ ++I+G  + G+  D  R+   M     
Sbjct: 328 INGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHI 387

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQM-MEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
             N Y +S +I  L K+ ++ +A+ + +++ M     P T +Y+ +ID LC+ GK DEA 
Sbjct: 388 QPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEAN 447

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
            I+ +M   GC  + +TY+ L+ G    G+  +A+ ++  M +  C
Sbjct: 448 LIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGC 493



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/377 (23%), Positives = 175/377 (46%), Gaps = 53/377 (14%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+E +Y  +I  LC  G    A+ L D+M+       E  + + + G       +D A  
Sbjct: 106 PSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAAST 165

Query: 355 LMSMEER-KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           L++   R    +  Y Y+ L++ L   G+A+DA+ L++  ++ G      +YS       
Sbjct: 166 LLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDG------LYS------- 212

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
               PD                  ++++ ++KG    G   KA+E+ + M +  C  + +
Sbjct: 213 ----PD-----------------VWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTI 251

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRG-CKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
            +++L+ GLC   ++ +   V  ++   G C P+ V Y+S+I G C AG +E+A+ ++N+
Sbjct: 252 THNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYND 311

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--- 589
           ML  E  ++P+  TYN+L+N   K  ++  ++ +   ++ R C PD+VT +  +      
Sbjct: 312 ML--ESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRC 369

Query: 590 ----------KE-KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV-EVMLQKFLSPQTST 637
                     KE  L   Q      + +   L K+ R++    I+ E+ ++  ++PQT  
Sbjct: 370 GQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFI 429

Query: 638 WERVVQELCRPKRIQAA 654
           +  V+  LC+  ++  A
Sbjct: 430 YNPVIDILCKGGKVDEA 446


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 216/423 (51%), Gaps = 20/423 (4%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
            +  F TM++ F  K    + + +L  + + GL    + F N+I++AK+           
Sbjct: 274 TLETFGTMINGFCKKGDFVASDRLLEEVKERGL-RVCVWFLNNIIDAKY----------- 321

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
                  R G   +  +  R +   +C+PDI TY  L++ LCKE + + A  LLDE    
Sbjct: 322 -------RHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKK 374

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G   T +++  LI   CK+ E   A+KL+  +  +GC P+ VTY  LIHGL + G++D A
Sbjct: 375 GLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDA 434

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           V++  +++     P+   Y  +++GL K GR +    +   M +R    + Y+Y+TLI G
Sbjct: 435 VNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDG 494

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             + G  ++A K++   +EKG K + V ++A+I G CR G  DEA   +  M       +
Sbjct: 495 FIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPD 554

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            FTYS+++ G+ +      A++I++DM KN C  N V Y+ LI+G C  G    A   + 
Sbjct: 555 KFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFK 614

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M SR   P+VV Y+++I       S  E    + E++ +  K  P+  T+N LL    K
Sbjct: 615 EMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELM-MTNKCVPNEVTFNCLLQGFVK 673

Query: 557 QSN 559
           +++
Sbjct: 674 KTS 676



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 153/607 (25%), Positives = 271/607 (44%), Gaps = 81/607 (13%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           S ++  A    F  +E VL  +R E   +  ++   +  AY ++  + +A+ ++  +V+ 
Sbjct: 104 SFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVEL 163

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
           +     V + N++L+++++      A + Y+ +   +    + N  T  +++K +C  G 
Sbjct: 164 YDSVPDVIACNALLSLVVKSRRLEDARKVYDEM--CERGGCVDNYSTC-IMVKGMCSEGK 220

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           V+   +L  +   + C P+I  Y T++ G CK   ++ A L+  E+++ G  PT  TF  
Sbjct: 221 VEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGT 280

Query: 268 LINGLCKNGELGRAAKLVDNMFLKG----------------------------------- 292
           +ING CK G+   + +L++ +  +G                                   
Sbjct: 281 MINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVAND 340

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM--------------------------VAS 326
           C P+  TYN LI+ LC +G  + A  LLD                            +AS
Sbjct: 341 CKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIAS 400

Query: 327 K---------CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           K         C P+ VTYG +I+GLV  G   D   + + + +R    +  IY+ L+SGL
Sbjct: 401 KLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K G+   A  L+ +M+++   P+  VY+ LIDG  R G  DEA ++    +  G   + 
Sbjct: 461 CKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDV 520

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
             +++++KGF  SG   +A+     M + + V ++  YS +I G  +   +  A  ++  
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRD 580

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M    CKP+VV Y+S+I+G C  G    A + F EM   +    P+V TY  L+ +  K+
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRD--LVPNVVTYTTLIRSFAKE 638

Query: 558 SN-ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK-----LEAPQDGTDFLNELAIRLF 611
           S+ +  ++     MM   C P+ VT N  L    +K     L  P       + L    F
Sbjct: 639 SSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFF 698

Query: 612 KRQRTSG 618
            R ++ G
Sbjct: 699 HRMKSDG 705



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/561 (24%), Positives = 247/561 (44%), Gaps = 58/561 (10%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMR-REKRVVLEKSFIFIFKAYGKAHL 133
           KL  +     TF ++I  +   GDF + + +L  ++ R  RV +      I   Y     
Sbjct: 267 KLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFK 326

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+ A  +   + ++  CK  + ++N ++N + +EG    A    +    A    ++   L
Sbjct: 327 VDPAESIRWIVAND--CKPDIATYNILINRLCKEGKKEVAAGLLDE---ASKKGLILTNL 381

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++  +I+  C+    D A +L  ++  R C+PDI TY  L+ GL     +D+AV +  ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P    +N+L++GLCK G    A  L   M  +  LP+   Y TLI G    G+ 
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDF 501

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A  +    V      + V +  +I G  + G   +    +  M E     +++ YST+
Sbjct: 502 DEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I G  K+     A+K+++ M +  CKPN V Y++LI+G C  G    AEE   EM +   
Sbjct: 562 IDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDL 621

Query: 434 AANAFTYSSLMKGFF-ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG----------- 481
             N  TY++L++ F  ES    KAV  W+ M  N CV NEV ++ L+ G           
Sbjct: 622 VPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLG 681

Query: 482 --------------------------------------LCEDGKLREARMVWTQMLSRGC 503
                                                 LC  G ++ A M+  +M+ +G 
Sbjct: 682 EPDGFNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGF 741

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PD V++++++HG C  G+ ++   +  +   L+ K       Y+ +L     ++ I  +
Sbjct: 742 SPDPVSFAAILHGFCVVGNSKQWRNM--DFRNLDEKGLEVAVRYSRVLEQHLPKAVICEA 799

Query: 564 IDLLNSMMDRGCDPDLVTCNI 584
             +L++M+++    +   C I
Sbjct: 800 STILHAMVEKADTKEPEICRI 820



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 138/528 (26%), Positives = 239/528 (45%), Gaps = 80/528 (15%)

Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSF--NSVLNVIIQEGLYHRALEFYNHIVNAKH 185
           + +   VE  ++LF  +  E   +     F  +S L ++ +  +++   E  + + N ++
Sbjct: 71  FDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARHRIFN---EIEDVLGNLRN 127

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENRLD 244
            N+       + V+      G +  A++++  +  + +  PD+     L+  + K  RL+
Sbjct: 128 ENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLE 187

Query: 245 EAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +A  + DEM +  GC     T  +++ G+C  G++    KL+++ + KGC+PN V YNT+
Sbjct: 188 DARKVYDEMCERGGCVDNYSTC-IMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTI 246

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G C  G+++ A  +   +     MP   T+GT+ING  K G  V   R+L  ++ER  
Sbjct: 247 IGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGL 306

Query: 364 HV-----NEYI------------------------------YSTLISGLFKEGKAEDAMK 388
            V     N  I                              Y+ LI+ L KEGK E A  
Sbjct: 307 RVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAG 366

Query: 389 LWKQ-----------------------------------MMEKGCKPNTVVYSALIDGLC 413
           L  +                                   + E+GCKP+ V Y  LI GL 
Sbjct: 367 LLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLV 426

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
             G  D+A  +  ++I+ G + +A  Y+ LM G  ++G+   A  ++ +M   + + +  
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAY 486

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y+ LI G    G   EAR V+T  + +G K DVV +++MI G C +G ++EAL   N M
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
              E    PD FTY+ +++   KQ +++ +I +   M    C P++VT
Sbjct: 547 --NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVT 592



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/272 (21%), Positives = 115/272 (42%), Gaps = 23/272 (8%)

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           N    S+ +  L R    +E E++L  + N          S ++  + ESG   KAVEI+
Sbjct: 98  NGFACSSFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIY 157

Query: 461 KDMAK-NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
             + +  + V + +  + L+  + +  +L +AR V+ +M  RG   D  +   M+ G+C+
Sbjct: 158 DYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCS 217

Query: 520 AGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
            G VEE  KL  +     C+     P++  YN ++   CK  +I ++  +   +  +G  
Sbjct: 218 EGKVEEGRKLIEDRWGKGCV-----PNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFM 272

Query: 577 PDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIRL-------FKRQRTSGGFKI----- 622
           P L T    +     K    A     + + E  +R+           +   GFK+     
Sbjct: 273 PTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAES 332

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +  ++     P  +T+  ++  LC+  + + A
Sbjct: 333 IRWIVANDCKPDIATYNILINRLCKEGKKEVA 364


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 146/522 (27%), Positives = 253/522 (48%), Gaps = 21/522 (4%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           EA+RL   MVD       V    S++      G  + AL  ++ +V    + + PN   F
Sbjct: 310 EALRLKDEMVDS-RVPVNVAVATSLIKGYCVRGDVNSALRLFDEVV---EVGVTPNVAIF 365

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           +++I+   ++G V+ A +L+  M     +P ++    L+ G  K+N L+ A LLLD   V
Sbjct: 366 SVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDG-AV 424

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
           +    + VT+N+++  LC+ G++  A  L D M  KG  P+ V+YN +I G C KG +D 
Sbjct: 425 ENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDD 484

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A  +++ ++ S   PN +TY  ++ G  K G       +   M        +Y ++++I+
Sbjct: 485 AHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIIN 544

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL K G+  +A       +++   P ++ Y+ +IDG  + G  D AE +  EM  +  + 
Sbjct: 545 GLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISP 604

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           N  TY+SL+ GF +S K   A+++  DM +     +   Y+ LI G C+   +  A   +
Sbjct: 605 NVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFF 664

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
           +++L  G  P+ + Y+ MI    N  ++E AL L  EM+    K   D+  Y  L++ L 
Sbjct: 665 SKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMI--NNKIPCDLKIYTSLIDGLL 722

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--------KEKLEAPQDGTD------ 601
           K+  +S ++DL + M+ RG  PD+   N+ +  L          K+    DG +      
Sbjct: 723 KEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVL 782

Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
             N L    FK       F++ + ML K L P  +T++ +V 
Sbjct: 783 LYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVN 824



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 226/431 (52%), Gaps = 7/431 (1%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
           F+ K + K +L+E A  L    V+  +   +V ++N VL  + + G  + A   ++ ++ 
Sbjct: 402 FLLKGFRKQNLLENAYLLLDGAVE--NGIASVVTYNIVLLWLCELGKVNEACNLWDKMIG 459

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
                I P+ +++N +I   C+ G +D+A ++   +     +P+  TY  LM+G  K+  
Sbjct: 460 K---GITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGD 516

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            + A  + D+M   G  PT  TFN +INGLCK G +  A   ++    +  +P  +TYN 
Sbjct: 517 CEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNC 576

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I G   +G +D A S+   M  S+  PN +TY ++ING  K  +     ++   M+ + 
Sbjct: 577 IIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKG 636

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
             ++  +Y+TLI+G  K    E+A K + +++E G  PNT+VY+ +I     +   + A 
Sbjct: 637 LELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAAL 696

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +  EMINN    +   Y+SL+ G  + GK   A++++ +M     V +   Y+VLI+GL
Sbjct: 697 NLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGL 756

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C  G+L  A  +  +M      P V+ Y+++I G    G+++EA +L +EM  L+    P
Sbjct: 757 CNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEM--LDKGLVP 814

Query: 543 DVFTYNILLNA 553
           D  TY+IL+N 
Sbjct: 815 DDTTYDILVNG 825



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 219/482 (45%), Gaps = 19/482 (3%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           L ++  FN ++ +  R   +  A++ FR M      P +     L+  + + N +++A  
Sbjct: 149 LSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHR 208

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L DEM     +    T  VL+    K G+   A +       +G   +  +Y+ +I  +C
Sbjct: 209 LFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVC 268

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
              +LD A  L++       +P+E TY  +I   V+LG   +  R+   M + +  VN  
Sbjct: 269 RGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVA 328

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           + ++LI G    G    A++L+ +++E G  PN  ++S LI+   ++G  ++A E+   M
Sbjct: 329 VATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRM 388

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G     F  + L+KGF +      A  +  D A  N + + V Y++++  LCE GK+
Sbjct: 389 KCMGLQPTVFILNFLLKGFRKQNLLENAY-LLLDGAVENGIASVVTYNIVLLWLCELGKV 447

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EA  +W +M+ +G  P +V+Y+ MI G C  G +++A ++ N +  +E   +P+  TY 
Sbjct: 448 NEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI--IESGLKPNAITYT 505

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           IL+    K+ +  H+ ++ + M+  G  P   T N  +  L  K+    +  D LN    
Sbjct: 506 ILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLC-KVGRVSEARDKLNTFIK 564

Query: 609 RLF---------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
           + F               K         +   M +  +SP   T+  ++   C+  ++  
Sbjct: 565 QSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDL 624

Query: 654 AI 655
           A+
Sbjct: 625 AL 626



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/409 (22%), Positives = 174/409 (42%), Gaps = 19/409 (4%)

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            FN L+    +  ++  A +    M   G +P     N L+  +  +  ++ A  L D M
Sbjct: 154 VFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEM 213

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
              +   +  T   ++   +K G+ V+  R       R   ++   YS +I  + +    
Sbjct: 214 AERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDL 273

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A KL +   E G  P+   Y+A+I    R+G   EA  +  EM+++    N    +SL
Sbjct: 274 DLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSL 333

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           +KG+   G  + A+ ++ ++ +     N   +SVLI    + G + +A  ++T+M   G 
Sbjct: 334 IKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGL 393

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +P V   + ++ G      +E A  L +  +         V TYNI+L  LC+   ++ +
Sbjct: 394 QPTVFILNFLLKGFRKQNLLENAYLLLDGAV---ENGIASVVTYNIVLLWLCELGKVNEA 450

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL--------AIRL----- 610
            +L + M+ +G  P LV+ N  +    +K     D  + +N +        AI       
Sbjct: 451 CNLWDKMIGKGITPSLVSYNHMILGHCKK-GCMDDAHEVMNGIIESGLKPNAITYTILME 509

Query: 611 --FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
             FK+      F + + M+   + P   T+  ++  LC+  R+  A +K
Sbjct: 510 GSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDK 558


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 261/522 (50%), Gaps = 25/522 (4%)

Query: 131 AHLVEEAIRLFHTMVDEFHCKRTVKSF--NSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
            H  ++A+  F+ M   FH   T  +F  N +L  ++    Y  A+  Y  +   +   +
Sbjct: 36  THNADDAVSQFNHM---FHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQM---ELSEV 89

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            P+  T N++I   C  G V  A     ++     +P+  T  TLM GLC E ++ EA+ 
Sbjct: 90  EPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALR 149

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
             D++   G   + +++ +LING+CK GE   A +L+  +      PN V Y+ +I  LC
Sbjct: 150 FHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLC 209

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
               +D+A  L   MV     P+ VTY  +++G   +G+      +L  M     + + Y
Sbjct: 210 KDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIY 269

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+ L+  L KEGK ++A  +   M++     + VVYS L+DG C V + + A+ + + M
Sbjct: 270 TYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTM 329

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G   +   YS ++ G  +  +  +A+ +++++ + N V + V Y+ LI  LC+ G++
Sbjct: 330 TQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRI 389

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
                ++ +ML RG  PDV+ Y+++I  LC  G ++ A+ LFN+M   +   +P+V+T+ 
Sbjct: 390 SYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKM--KDQAIRPNVYTFT 447

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQDGTDFLNELA 607
           ILL+ LCK   + ++++    ++ +G   ++ T  + +  L KE L         L+E A
Sbjct: 448 ILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGL---------LDE-A 497

Query: 608 IRLFKRQRTSGGFK---IVEVMLQKFLSP-QTSTWERVVQEL 645
           + L  R   +G        E+M++ F    +    E++V+E+
Sbjct: 498 LALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREM 539



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 228/419 (54%), Gaps = 5/419 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           + N+++  +  EG    AL F++ ++ A+   +  + +++ ++I  VC++G    AI+L 
Sbjct: 130 TLNTLMKGLCLEGKVKEALRFHDKVL-AQGFRL--SGISYGILINGVCKIGETRAAIRLL 186

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R +   +  P++  Y  ++D LCK+  +DEA  L  EM   G  P  VT+++L++G C  
Sbjct: 187 RRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIV 246

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L RA  L++ M L+   P+  TY  L+  LC +G + +A ++L  MV +    + V Y
Sbjct: 247 GQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVY 306

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+++G   +    +  RV  +M +     + + YS +I+GL K  + ++A+ L++++ +
Sbjct: 307 STLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQ 366

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           K   P+TV Y++LID LC+ G+     ++  EM++ G   +  TY++L+    ++G   +
Sbjct: 367 KNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDR 426

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ ++  M       N   +++L+ GLC+ G+L+ A   +  +L++G   +V  Y+ MI+
Sbjct: 427 AIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMIN 486

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           GLC  G ++EAL L + M   +     D  T+ I++ A   +     +  L+  M+ RG
Sbjct: 487 GLCKEGLLDEALALQSRM--EDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARG 543



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 167/348 (47%), Gaps = 23/348 (6%)

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           L  N D AVS  + M      P+   +  I+  LV + R      +   ME  +   + +
Sbjct: 35  LTHNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYF 94

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
             + +I+     G+   A     ++++ G +PNT+  + L+ GLC  GK  EA     ++
Sbjct: 95  TLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKV 154

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +  G   +  +Y  L+ G  + G+   A+ + + + + +   N V YS++I  LC+D  +
Sbjct: 155 LAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLV 214

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EA  ++T+M+ +G  PDVV YS ++ G C  G +  A+ L NEM+ LE    PD++TY 
Sbjct: 215 DEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMV-LE-NINPDIYTYT 272

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           IL++ALCK+  +  + ++L  M+    + D+V  +  +           DG   +NE+  
Sbjct: 273 ILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLM-----------DGYCLVNEV-- 319

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                   +   ++   M Q  ++P    +  ++  LC+ KR+  A+N
Sbjct: 320 --------NNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALN 359



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 85/155 (54%), Gaps = 4/155 (2%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           LF  M+D       V ++N++++ + + G   RA+  +N +   K   I PN  TF +++
Sbjct: 395 LFDEMLDRGQ-PPDVITYNNLIDALCKNGHLDRAIALFNKM---KDQAIRPNVYTFTILL 450

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C++G + NA++ F+++  +    ++ TY  +++GLCKE  LDEA+ L   M+ +GC 
Sbjct: 451 DGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCI 510

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
              VTF ++I       E  +A KLV  M  +G L
Sbjct: 511 SDAVTFEIMIRAFFDKDENDKAEKLVREMIARGLL 545


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 142/520 (27%), Positives = 254/520 (48%), Gaps = 50/520 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V +A+ LF+ ++ +      ++ F  +L  +++   YH  L  +  +   ++  I PN +
Sbjct: 51  VVDAVSLFNCLLRQNPTPPDME-FGQILGSLVKSKHYHTVLSLFQKM---EYRGIKPNFV 106

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            FN++I   C+LGL+  A  +  ++     EPD  T  T + G C + ++ +A+   D++
Sbjct: 107 NFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKL 166

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G     V++  LINGLCK GE   A +L+  +  K    + V Y+T+I  +C   N+
Sbjct: 167 VALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNV 226

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           + A  L   MV+ +   N VTY  +I+G   +G+  D   +   M     + + Y ++ L
Sbjct: 227 NDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNIL 286

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +    KEG+ ++A      MM++G KP+ V Y++L+DG C V + + A+ IL  M + G 
Sbjct: 287 VDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGV 346

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
            A   +Y+ ++ GF +     +A++++K+M       N + Y+ LI GLC+ G++  A  
Sbjct: 347 TATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALE 406

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   M  RG +PD++ YSS++  LC    V++A+ L  ++   +   +P+++TY IL++ 
Sbjct: 407 LIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKL--KDQGIRPNMYTYTILIDG 464

Query: 554 LCK------------------------------QSNISH-----SIDLLNSMMDRGCDPD 578
           LCK                              Q   SH     ++ LL+ M D  C PD
Sbjct: 465 LCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPD 524

Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            +T  I + +L +K E         N+ A +L +   T G
Sbjct: 525 AITYEIIICSLFDKDE---------NDKAEKLLREMITRG 555



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 216/437 (49%), Gaps = 10/437 (2%)

Query: 99  FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVD-EFHCKRTVKSF 157
           F  L  +L +M  E   +   +FI  F   G+ H   +A+     +V   FH  +   S+
Sbjct: 125 FSVLAKIL-KMGYEPDTITLNTFIKGFCLKGQIH---QALNFHDKLVALGFHLDQV--SY 178

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
            +++N + + G    ALE     V+ K + +  + + ++ +I ++C+   V++A  L+ E
Sbjct: 179 GTLINGLCKVGETRAALELLRR-VDGKLVQL--DVVMYSTIIDSMCKDKNVNDAFDLYSE 235

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           M  R    +I TY  L+ G C   +L +A+ L ++M  +   P   TFN+L++  CK G 
Sbjct: 236 MVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGR 295

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +  A   +  M  +G  P+ VTYN+L+ G CL   ++ A S+L+ M          +Y  
Sbjct: 296 VKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNI 355

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +ING  K+       ++   M  ++   N   Y++LI GL K G+   A++L   M ++G
Sbjct: 356 VINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRG 415

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            +P+ + YS+++D LC+    D+A  +L ++ + G   N +TY+ L+ G  + G+   A 
Sbjct: 416 QQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDAR 475

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
            I++D+           Y+V+I G C  G   EA  + ++M    C PD + Y  +I  L
Sbjct: 476 NIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSL 535

Query: 518 CNAGSVEEALKLFNEML 534
            +    ++A KL  EM+
Sbjct: 536 FDKDENDKAEKLLREMI 552



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/471 (26%), Positives = 225/471 (47%), Gaps = 46/471 (9%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V  ++++++ + ++   + A + Y+ +V+ +   I  N +T++ +I   C +G + +AI 
Sbjct: 210 VVMYSTIIDSMCKDKNVNDAFDLYSEMVSRR---ISSNIVTYSALISGFCIVGKLKDAIG 266

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           LF +M   N  PD+YT+  L+D  CKE R+ EA   L  M   G  P  VT+N L++G C
Sbjct: 267 LFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYC 326

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
              E+  A  +++ M  +G      +YN +I+G C    +D+A+ L   M   +  PN +
Sbjct: 327 LVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVI 386

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY ++I+GL K GR      ++  M +R    +   YS+++  L K    + A+ L  ++
Sbjct: 387 TYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKL 446

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            ++G +PN   Y+ LIDGLC+ G+ ++A  I  +++  G      TY+ +++GF   G  
Sbjct: 447 KDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLF 506

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ +   M  N+C+ + + Y ++I  L +  +  +A  +  +M++RG     + Y S 
Sbjct: 507 DEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSW 566

Query: 514 --------IHGLCNAG----SVEEA---LKLFNEML---CLEPKSQP------------- 542
                    H L N      S +E+    KL  E +   C+  KS               
Sbjct: 567 SLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIY 626

Query: 543 ------------DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
                       DV TY +++   C       S+ LL+ M   GC PD VT
Sbjct: 627 STCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVT 677



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 134/472 (28%), Positives = 225/472 (47%), Gaps = 53/472 (11%)

Query: 103 EMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN 162
           EMV  R+     +V   + I  F   GK   +++AI LF+ M  E +    V +FN +++
Sbjct: 235 EMVSRRI--SSNIVTYSALISGFCIVGK---LKDAIGLFNKMTSE-NINPDVYTFNILVD 288

Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
              +EG   R  E  N +       I P+ +T+N ++   C +  V+ A  +   M  R 
Sbjct: 289 AFCKEG---RVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
               + +Y  +++G CK   +D+A+ L  EM     FP  +T+N LI+GLCK+G +  A 
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +L+D M  +G  P+ +TY++++  LC    +DKA++LL ++      PN  TY  +I+GL
Sbjct: 406 ELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGL 465

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K GR  D   +   +  + +++    Y+ +I G    G  ++A+ L  +M +  C P+ 
Sbjct: 466 CKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDA 525

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF-------------- 448
           + Y  +I  L    + D+AE++L EMI  G   +   Y S    F               
Sbjct: 526 ITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQC 585

Query: 449 ----ESGKGHKAV--EIWKD--MAKNNCVYNEV-CYSVLIHGLCEDGKLREARMVWTQML 499
               ESG   K +   I+ D  + K+N    +V C SV+I+  C+          W++  
Sbjct: 586 TSSQESGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCD----------WSK-- 633

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYN 548
            +G   DV  Y+ MI G C+ G  +E+L L ++M    C+     PD  TY+
Sbjct: 634 -QGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCI-----PDAVTYD 679



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 110/468 (23%), Positives = 197/468 (42%), Gaps = 100/468 (21%)

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
           F T  TF+        N ++  A  L + +  +   P ++ +  ++  L    +    +S
Sbjct: 39  FSTSTTFH-------NNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLS 91

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           L  +M      PN V +  +IN   +LG       VL  + +  +  +    +T I G  
Sbjct: 92  LFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFC 151

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL------------- 425
            +G+   A+    +++  G   + V Y  LI+GLC+VG+   A E+L             
Sbjct: 152 LKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVV 211

Query: 426 ----------------------FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
                                  EM++   ++N  TYS+L+ GF   GK   A+ ++  M
Sbjct: 212 MYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKM 271

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM---------- 513
              N   +   +++L+   C++G+++EA+     M+ +G KPD+V Y+S+          
Sbjct: 272 TSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEV 331

Query: 514 -------------------------IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
                                    I+G C    V++A+KLF EM     +  P+V TYN
Sbjct: 332 NMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEM--HHKQIFPNVITYN 389

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            L++ LCK   IS++++L++ M DRG  PD++T +  L AL +         + L + AI
Sbjct: 390 SLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCK---------NHLVDKAI 440

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            L  + +  G            + P   T+  ++  LC+  R++ A N
Sbjct: 441 ALLIKLKDQG------------IRPNMYTYTILIDGLCKGGRLEDARN 476


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 238/489 (48%), Gaps = 7/489 (1%)

Query: 111 REKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY 170
           R+  V  + ++  + +   +  + E+A  L   M D      T   FN V+  ++ + L+
Sbjct: 310 RDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPST-NEFNMVIKGLLNDKLW 368

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
             A+  +  + ++     +P+  T+N++I  +C+   +  A+ L+ +M     +P I TY
Sbjct: 369 KDAVSLFKEMADSG----IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTY 424

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +L+   C    +DEAV L  EM   G  P  VT+  L+ G        +A  L+  M  
Sbjct: 425 HSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQ 484

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
            G   N+ TYNTLI+GLC+ G + +   +L R      +P  +TY +IING +K G    
Sbjct: 485 NGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGS 544

Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
              V   M  +    N   Y++ I G  K    + A+K+   +  KG +P+   Y++LI 
Sbjct: 545 AFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIY 604

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G C+ G    A ++L  M+ +G   N   Y+S + G+       +A+  ++ M K     
Sbjct: 605 GFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDL 664

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           +   Y+ LI G  +DG +  A  ++++M+++G  PD + ++++ HGLC  G +++A KL 
Sbjct: 665 DTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLL 724

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
           +EM  L+ +  P+V  YN+L+N   +   +  +  L + M++R   PD  T +I +    
Sbjct: 725 DEMNRLDIR--PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKS 782

Query: 591 EKLEAPQDG 599
              ++P D 
Sbjct: 783 LGSDSPIDA 791



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/547 (26%), Positives = 246/547 (44%), Gaps = 55/547 (10%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F+ V+    +EG+Y  A+  ++ +  ++   I P+    ++ I ++C+L   + A+ + R
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASE---IEPDQRVCSVAIASLCKLRDANRALLVLR 236

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M      P  +T+ +++D L K  R++EA+ + DE+   G   + V    L++G C   
Sbjct: 237 KMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQR 296

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           E+ +A  + +     G +P +VTY  LI G   +G  +KA  L  +M     +P+   + 
Sbjct: 297 EVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFN 356

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +I GL+      D   +   M +     + + Y+ LI  L +  K  +A+ LW++M E 
Sbjct: 357 MVIKGLLNDKLWKDAVSLFKEMADSGIP-DAFTYNILIHWLCQRRKIREALNLWEKMNET 415

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G KP  V Y +L+   C  G  DEA ++  EM   G   N  TY++LMKG        KA
Sbjct: 416 GVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKA 475

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE-------------------------- 490
             +  +M +N    N+  Y+ LI+GLC  G++ E                          
Sbjct: 476 YALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIING 535

Query: 491 ---------ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
                    A  V+ QM ++G  P++V Y+S I G C     + ALK+ N++ C     +
Sbjct: 536 FIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRC--KGLR 593

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT----------ALKE 591
           PD+  YN L+   C++ N+SH++ +L  M+  G  P++   N F+T          AL+ 
Sbjct: 594 PDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRF 653

Query: 592 KLEAPQDGTDFLNELAIRLF----KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
             +  ++G D        L     K    +   K+   M+ K   P   T+  +   LCR
Sbjct: 654 YEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCR 713

Query: 648 PKRIQAA 654
              I  A
Sbjct: 714 NGDIDDA 720



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/299 (22%), Positives = 124/299 (41%), Gaps = 59/299 (19%)

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M  +   ++ +++  ++   FKEG  +DA++L+ +M     +P+  V S  I  LC++  
Sbjct: 168 MRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRD 227

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            + A  +L +M + G     FT++S++                                V
Sbjct: 228 ANRALLVLRKMQDAGFVPWDFTFNSVV-------------------------------DV 256

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           L+ G    G++ EA  +  ++L+ G K  VV  ++++HG C    V +AL +F E   L 
Sbjct: 257 LVKG----GRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEE--TLR 310

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
               P   TY +L+    ++     + +L   M D G  P     N+ +  L        
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLL------- 363

Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
              D L + A+ LFK    SG              P   T+  ++  LC+ ++I+ A+N
Sbjct: 364 --NDKLWKDAVSLFKEMADSG-------------IPDAFTYNILIHWLCQRRKIREALN 407


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 216/411 (52%), Gaps = 4/411 (0%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
           ++  A  K      A+ L   M+ E  C     ++  V++ + ++GL  + L+ +  ++N
Sbjct: 49  YLINALRKTRQARRAVELHRRMLSEI-CSGNFFTYGLVIDSLCKDGLAIKGLKMFREMIN 107

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
              M I PN + ++ +I  +CR+G +  A+ LF EM  +  + ++ TY +L+   C+   
Sbjct: 108 ---MGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGL 164

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
             EA     +M  +G  P  VTF  LI+ L K G++  A K+ + M  +G  PN VTYN+
Sbjct: 165 WKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNS 224

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           L++GLCL   +D AV L + MV      + ++Y T+ING    G+  +   +   M+  +
Sbjct: 225 LLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              +   Y+ L+  L++ G+   A +L+  M   G  P+   Y+ L+DGLC+ G  +EA 
Sbjct: 285 LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           ++   + +     +   YS L+ G F++ +   A+EI+ ++     V N V Y+++I+GL
Sbjct: 345 DVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGL 404

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           C++GKL EA  ++ QM   GC+ D ++++ +I G      V++A++    M
Sbjct: 405 CKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRM 455



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 224/450 (49%), Gaps = 34/450 (7%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T + ++K +C  G V +A++LF +M     + DI  Y  L++ L K  +   AV L
Sbjct: 7   PNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVEL 66

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
              M  + C     T+ ++I+ LCK+G   +  K+   M   G  PN + Y++LI+GLC 
Sbjct: 67  HRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L +AV+L D MV+     N +TY ++I+   + G   +  R    M       +   
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++TLI  L K+GK ++A K+++ M+++G  PN V Y++L++GLC   + D A  +   M+
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  +Y++L+ G+  SGK  +A+ +++ M       +   Y++L+  L ++G++R
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ-------- 541
            A+ ++  M   G  P +  Y+ ++ GLC  G +EEA+ +F  +  ++ K          
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILI 366

Query: 542 -------------------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
                                    P++ TYNI++N LCK+  +  +  L   M + GC+
Sbjct: 367 GGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCE 426

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
            D ++ N  +    ++ +  Q   +FL  +
Sbjct: 427 QDEISFNFIIRGFLQENQV-QKAMEFLKRM 455



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 206/412 (50%), Gaps = 16/412 (3%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P  VT + L+ G+C  G++  A +L D M   G   + + Y  LI+ L       +A
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           V L  RM++  C  N  TYG +I+ L K G A+ G ++   M       N  +YS+LI+G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
           L + GK  +A+ L+ +M+ +G K N + Y++LI   CR G   EA     +M+  G   +
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             T+++L+    + GK  +A +I++ M K     N V Y+ L++GLC   ++  A  ++ 
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M+ RG K DV++Y+++I+G C +G  EEA+ LF +M   E    P + TY ILL AL +
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELT--PSITTYTILLKALYQ 301

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL------KEKLEAPQDGTDFLNELAIR- 609
              I  + +L N+M   G  P L T  + L  L      +E ++  +       + +IR 
Sbjct: 302 NGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRI 361

Query: 610 -------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                  +F+ +R     +I + +    L P   T+  ++  LC+  ++  A
Sbjct: 362 YSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEA 413



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 186/357 (52%), Gaps = 4/357 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EA+ LF  MV +   K  V ++NS+++   + GL+  A   ++ +V      ILP+ +
Sbjct: 130 LREAVNLFDEMVSQ-GIKANVITYNSLIHASCRFGLWKEATRTFSQMVGE---GILPDVV 185

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           TF  +I  + + G V  A ++F  M  +   P+I TY +L++GLC  +++D AV L + M
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVM 245

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G     +++N LING C +G+   A  L   M  +   P+  TY  L+  L   G +
Sbjct: 246 VERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRI 305

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
             A  L + M      P+  TY  +++GL K G   +   V  S++  K+  +  IYS L
Sbjct: 306 RTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSIL 365

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I G+F+  + E AM+++ ++   G  PN V Y+ +I+GLC+ GK  EAE +  +M  +GC
Sbjct: 366 IGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGC 425

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
             +  +++ +++GF +  +  KA+E  K M + N   N+    +L++    D +  E
Sbjct: 426 EQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSE 482



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 23/262 (8%)

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           M+ G +PN V  S L+ G+C  GK  +A E+  +M  +G   +   Y  L+    ++ + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +AVE+ + M    C  N   Y ++I  LC+DG   +   ++ +M++ G  P+V+ YSS+
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I+GLC  G + EA+ LF+EM+    K+  +V TYN L++A C+      +    + M+  
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKA--NVITYNSLIHASCRFGLWKEATRTFSQMVGE 178

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           G  PD+VT     T L + L                  K+ +    +KI E+M+++  +P
Sbjct: 179 GILPDVVT----FTTLIDHLS-----------------KKGKVQEAYKIFELMIKQGEAP 217

Query: 634 QTSTWERVVQELCRPKRIQAAI 655
              T+  ++  LC   ++  A+
Sbjct: 218 NIVTYNSLLNGLCLHHQMDHAV 239



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 23/158 (14%)

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
           +  G +P++V  S+++ G+C  G V +AL+LF++M       Q D+  Y  L+NAL K  
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMT--RSGFQGDILLYGYLINALRKTR 58

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
               +++L   M+   C  +  T  + + +L       +DG      LAI+         
Sbjct: 59  QARRAVELHRRMLSEICSGNFFTYGLVIDSL------CKDG------LAIK--------- 97

Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           G K+   M+   + P    +  ++  LCR  +++ A+N
Sbjct: 98  GLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVN 135


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 160/610 (26%), Positives = 280/610 (45%), Gaps = 46/610 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  LI    +SG  +    +  +M        E +F  + + Y +A L  + + L   M
Sbjct: 149 TFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQM 208

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    V  +N++++   +EG  H A +  + +   +   ++P+  TFN  I  +C 
Sbjct: 209 RTMGILPNNV-LYNTLISSFCKEGKTHDAEKLVDKM---REDGLVPHVETFNSRISALCG 264

Query: 205 LGLVDNAIQLFREMPVRN----CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            G +  A ++FR+M +        P++ TY  ++ G CKE  L+EA  L+D M+ +  F 
Sbjct: 265 SGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFI 324

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              ++N+ + GL +NG+L  A  ++  M   G  P+  +YN ++ GLC  G L  A  L+
Sbjct: 325 NLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLM 384

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
             M+ +  +P+ VTY T+++G    G+  +   +L  M       N Y  + L+  L+KE
Sbjct: 385 GLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKE 444

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA----- 435
           G+  +A  L ++M EKG   +TV  + +I+ LC  G+ D+A EI+  M  +G AA     
Sbjct: 445 GRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLG 504

Query: 436 NAF------------------TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
           N+F                  TYS+++ G  ++G+   A + + +M       +   Y  
Sbjct: 505 NSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDT 564

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
            IH  C +GK+  A  V   M  RGC   +  Y+S+I GL +   + E   L +EM   E
Sbjct: 565 FIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEM--RE 622

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-------- 589
               PDV TYN +LN LC+   I+ +  +L+ M+ +G  P++ +  I + A         
Sbjct: 623 KGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKA 682

Query: 590 -KEKLEAPQDGTDFLNELAIRLFKRQRTSGGF----KIVEVMLQKFLSPQTSTWERVVQE 644
             E  E   +       L   +F      G      ++ E  L +        ++ ++  
Sbjct: 683 SHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDR 742

Query: 645 LCRPKRIQAA 654
           LC+ ++++AA
Sbjct: 743 LCKDEKLEAA 752



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/502 (27%), Positives = 237/502 (47%), Gaps = 9/502 (1%)

Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
           +++ V+ + G +++A+  +  +  +      P+   +N+++K+  R   V+    L+++M
Sbjct: 80  NLVTVLAKSGFFNKAISHFKSL-RSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDM 138

Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
            +    P+ YT+  L+  LC    L++A  L D+M   GC P   TF +L+ G C+ G  
Sbjct: 139 VLARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLA 198

Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
            +  +L+  M   G LPN V YNTLI   C +G    A  L+D+M     +P+  T+ + 
Sbjct: 199 SKGLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSR 258

Query: 339 INGLVKLGRAVDGARVLMSM---EERKF-HVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           I+ L   G+ ++ +R+   M   EE    H N   Y  ++ G  KEG  E+A  L   M 
Sbjct: 259 ISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMK 318

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
                 N   Y+  + GL R GK  EA  +L EM+  G   + ++Y+ +M G  ++G   
Sbjct: 319 RNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLS 378

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A  +   M +N  + + V YS L+HG C  GK+ EA  +  +M+S  C P+    + ++
Sbjct: 379 DARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLL 438

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           H L   G + EA  L  +M   E     D  T NI++NALC    +  +I+++N M   G
Sbjct: 439 HSLWKEGRISEAENLLQKM--NEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHG 496

Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI--RLFKRQRTSGGFKIVEVMLQKFLS 632
                   N F+  + + +   +   D +    I   L K  R     K    M+ K L 
Sbjct: 497 SAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQ 556

Query: 633 PQTSTWERVVQELCRPKRIQAA 654
           P ++ ++  +   CR  +I +A
Sbjct: 557 PDSAIYDTFIHSFCREGKISSA 578



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 153/534 (28%), Positives = 252/534 (47%), Gaps = 68/534 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFK----AYGKAHLVEEAIRL 140
           TF S I     SG       +   M+ ++ + L    +  +K     + K  ++EEA  L
Sbjct: 254 TFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTL 313

Query: 141 FHTMVDEFHCKRT-----VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
             TM      KR      ++S+N  L  +I+ G   + LE +  +     + I P+  ++
Sbjct: 314 VDTM------KRNANFINLESYNIWLLGLIRNG---KLLEAWIVLKEMLGIGIEPDIYSY 364

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N+V+  +C+ G++ +A  L   M      PD  TY TL+ G C + ++ EA  LL EM  
Sbjct: 365 NIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMIS 424

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
           + C P   T NVL++ L K G +  A  L+  M  KG   + VT N +I+ LC  G LDK
Sbjct: 425 NNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDK 484

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           A+ +++ M          T+G+    L  LG +  G  V  ++  +K   +   YST+IS
Sbjct: 485 AIEIVNGMW---------THGSA--ALGNLGNSFIGL-VDDTISGKKCTPDLVTYSTIIS 532

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           GL K G+ +DA K + +MM KG +P++ +Y   I   CR GK   A ++L +M   GC  
Sbjct: 533 GLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNK 592

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWK--DMAKNNCVYNEVC-YSVLIHGLCEDGKLREAR 492
              TY+SL+ G    G  ++  E++   D  +   V  +VC Y+ +++ LCE G++ +A 
Sbjct: 593 TLQTYNSLILGL---GSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAP 649

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE----------------EALK--LFNEML 534
            V  +ML +G  P++ ++  +I   C A   +                EAL   +FNE+L
Sbjct: 650 SVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELL 709

Query: 535 --------------CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
                          L+       F Y  L++ LCK   +  + D+L+ ++D+G
Sbjct: 710 VGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKG 763



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 231/522 (44%), Gaps = 65/522 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVV-LEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           T+  ++  +   G  +  + ++  M+R    + LE   I++        L+E  I L   
Sbjct: 293 TYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEM 352

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           +      +  + S+N V++ + + G+   A      ++      ILP+T+T++ ++   C
Sbjct: 353 L--GIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRN---GILPDTVTYSTLLHGYC 407

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G V  A  L  EM   NC P+ YT   L+  L KE R+ EA  LL +M   G     V
Sbjct: 408 SKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTV 467

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKG-----------------------CLPNEVTY 300
           T N++IN LC NG+L +A ++V+ M+  G                       C P+ VTY
Sbjct: 468 TCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTY 527

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           +T+I GLC  G LD A      M++    P+   Y T I+   + G+     +VL  ME+
Sbjct: 528 STIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEK 587

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R  +     Y++LI GL  + +  +   L  +M EKG  P+   Y+ +++ LC  G+ ++
Sbjct: 588 RGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRIND 647

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV--- 477
           A  +L EM+  G + N  ++  L+K F ++     + E++ ++A N C + E  Y++   
Sbjct: 648 APSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF-EIALNVCGHKEALYTLMFN 706

Query: 478 --------------------------------LIHGLCEDGKLREARMVWTQMLSRGCKP 505
                                           LI  LC+D KL  A  V  +++ +G + 
Sbjct: 707 ELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQF 766

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           D  ++  +I G    G+   A +L   M+ +  +S  +   Y
Sbjct: 767 DPASFMPVIDGFGKMGNKHVADELAERMMEMASESNKENKAY 808


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  211 bits (538), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 133/446 (29%), Positives = 223/446 (50%), Gaps = 22/446 (4%)

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
           H  +   SF SVL  I++ G YH                  P+ +T   +IK +C  G V
Sbjct: 116 HLGQITLSF-SVLATILKRG-YH------------------PDVITLTTLIKGLCLRGEV 155

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
             A++   ++     + D  +Y TL++GLCK      A+ L+  ++     P  V +N++
Sbjct: 156 KKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNII 215

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           I+ LCKN  +G A  L   M  K   PN VTY TLI+G C+ G L +AV+LL+ M     
Sbjct: 216 IDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNI 275

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+  T+  +I+ L K G+      VL  M +     +   Y++L+ G F   + + A  
Sbjct: 276 NPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKY 335

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           ++  M + G  P    Y+ +IDGLC+    DEA  +  EM +     N  T++SL+ G  
Sbjct: 336 VFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLC 395

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           +SG+     ++   M   + + + + YS LI  LC++  L +A  ++ +M+++  +PD+ 
Sbjct: 396 KSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMY 455

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +I GLC  G ++ A ++F  +L        D+ TY ++++  CK      ++ LL+
Sbjct: 456 TYTILIDGLCKGGRLKIAQEVFQHLLI--KGYHLDIRTYTVMISGFCKAGLFDEALALLS 513

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLE 594
            M D GC P+ +T +I + AL EK E
Sbjct: 514 KMEDNGCIPNAITFDIIICALFEKDE 539



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 216/446 (48%), Gaps = 23/446 (5%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           ++A+ LF  M +    P  + +  ++  L K  R   A+ L   +   G     VT N+L
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           IN  C  G++  +  ++  +  +G  P+ +T  TLI GLCL+G + KA+   D +VA + 
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
             + ++YGT+INGL K+G      +++ ++EER    +  +Y+ +I  L K     +A  
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L+ +M  K   PN V Y+ LI G C +G   EA  +L EM       + +T+S L+    
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALG 290

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           + GK   A  +   M K     + V Y+ L+ G     +++ A+ V+  M   G  P V 
Sbjct: 291 KEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQ 350

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +Y+ MI GLC    V+EA+ LF EM        P+  T+N L++ LCK   I++  DL++
Sbjct: 351 SYTIMIDGLCKTKMVDEAISLFEEM--KHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408

Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
            M DR    D++T +  + AL +     Q         AI LFK+            M+ 
Sbjct: 409 KMRDRSQLADVITYSSLIDALCKNCHLDQ---------AIALFKK------------MIT 447

Query: 629 KFLSPQTSTWERVVQELCRPKRIQAA 654
           + + P   T+  ++  LC+  R++ A
Sbjct: 448 QEIQPDMYTYTILIDGLCKGGRLKIA 473



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 219/421 (52%), Gaps = 5/421 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V +  +++  +   G   +AL+F++ +V    +    + +++  +I  +C++G    AIQ
Sbjct: 139 VITLTTLIKGLCLRGEVKKALKFHDDVVA---LEFQLDRISYGTLINGLCKIGETKAAIQ 195

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L R +  R+ +PD+  Y  ++D LCK   + EA  L  EM     +P  VT+  LI G C
Sbjct: 196 LMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFC 255

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G L  A  L++ M LK   P+  T++ LI  L  +G +  A  +L  M+ +   P+ V
Sbjct: 256 IMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVV 315

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY ++++G   +        V  SM +         Y+ +I GL K    ++A+ L+++M
Sbjct: 316 TYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEM 375

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
             K   PNT+ +++LIDGLC+ G+     +++ +M +    A+  TYSSL+    ++   
Sbjct: 376 KHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHL 435

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A+ ++K M       +   Y++LI GLC+ G+L+ A+ V+  +L +G   D+  Y+ M
Sbjct: 436 DQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVM 495

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I G C AG  +EAL L ++M   +    P+  T++I++ AL ++     +  LL  M+ R
Sbjct: 496 ISGFCKAGLFDEALALLSKM--EDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIAR 553

Query: 574 G 574
           G
Sbjct: 554 G 554



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 114/245 (46%), Gaps = 39/245 (15%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  Y    + K  + V   M +       +S+  +     K  +V+EAI LF  M
Sbjct: 316 TYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEM 375

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +     T+ +FNS+++ + + G   R    ++ +   +  + L + +T++ +I  +C+
Sbjct: 376 KHKNVIPNTI-TFNSLIDGLCKSG---RIAYVWDLVDKMRDRSQLADVITYSSLIDALCK 431

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL--------------------- 243
              +D AI LF++M  +  +PD+YTY  L+DGLCK  RL                     
Sbjct: 432 NCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRT 491

Query: 244 --------------DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
                         DEA+ LL +M+ +GC P  +TF+++I  L +  E  +A KL+  M 
Sbjct: 492 YTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMI 551

Query: 290 LKGCL 294
            +G L
Sbjct: 552 ARGLL 556


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 241/500 (48%), Gaps = 61/500 (12%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE-GLYHRALEFY 177
           ++ IF   + G+ H   EA+  F  M  EF C+ T   +N+VL V++   G    AL  Y
Sbjct: 143 EALIFAHASAGRHH---EAVEAFSRMEGEFGCRPTTFVYNAVLRVLVASGGAVPLALALY 199

Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
           N +V A     LPN  T+N++I  +C+ G   +A++LF EM  R   P++ T+  L+  +
Sbjct: 200 NRMVAA---GCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSM 256

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK-------------- 283
           C   +L EA  LL  M+  GC P  VT+N  ++GLCK G +  A +              
Sbjct: 257 CNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLG 316

Query: 284 ------LVDNMFLKG-------CL----------PNEVTYNTLIHGLCLKGNLDKAVSLL 320
                 L+D +FL G       C           P+ V Y  +I G    G  + A +  
Sbjct: 317 LKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFF 376

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFK 379
           D M      P+   Y T++  L   G  +DGAR LMS M      ++ + Y+T+I GL K
Sbjct: 377 DEMKEKGFTPDTFCYNTLLKALCDAGD-LDGARSLMSEMVRNNVVLDIHTYTTMIIGLCK 435

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM----------- 428
           E   ++AM+++  M+E GC P+ + Y+ LIDGL R  + +EA  + ++M           
Sbjct: 436 EQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLR 495

Query: 429 --INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
             +      ++ T   L++   +SG+  KA ++ + +  +  V + V Y+ L++GLC+  
Sbjct: 496 LTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVR 555

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            L  A  ++ ++  +G   D + Y ++I  L  A    +AL LF ++  L     P +  
Sbjct: 556 NLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDI--LHSGGTPSMPI 613

Query: 547 YNILLNALCKQSNISHSIDL 566
           YN ++ +LC+   +S +I+L
Sbjct: 614 YNSMMRSLCRMQKLSQAINL 633



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 246/523 (47%), Gaps = 41/523 (7%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT-VCRLGLVDNAIQL 214
           +F +++      G +H A+E ++ +         P T  +N V++  V   G V  A+ L
Sbjct: 141 AFEALIFAHASAGRHHEAVEAFSRM--EGEFGCRPTTFVYNAVLRVLVASGGAVPLALAL 198

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           +  M    C P+  TY  L+ GLCK     +A+ L DEM   G  P   T  +L++ +C 
Sbjct: 199 YNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCN 258

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G+L  A  L+ +M  KGC P+EVTYN  + GLC  G +D+A+  L+ +  +      + 
Sbjct: 259 AGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLK 318

Query: 335 -YGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
            Y  +I+GL   GR  +G +  M  +E+     +  +Y+ +I G  + G+  DA   + +
Sbjct: 319 GYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDE 378

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M EKG  P+T  Y+ L+  LC  G  D A  ++ EM+ N    +  TY++++ G  +   
Sbjct: 379 MKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQL 438

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM-----------LSR 501
             +A++++  M +  C  + + Y+VLI GL    +L EARM++ +M           L+ 
Sbjct: 439 VDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTL 498

Query: 502 GCKP--DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           G     D      ++  +C +G V +A KL   +  ++    PDV TYN LLN LCK  N
Sbjct: 499 GANQVRDSETLQKLVESMCQSGQVLKAYKLLRGI--IDSGVVPDVVTYNTLLNGLCKVRN 556

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +  ++ L   +  +G   D +T    + +                     L +  R +  
Sbjct: 557 LDGALRLFRELQVKGFPLDEITYGTLIDS---------------------LLRAHRYNDA 595

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
             + + +L    +P    +  +++ LCR +++  AIN  + +L
Sbjct: 596 LTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHL 638



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 205/435 (47%), Gaps = 33/435 (7%)

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLK 310
           + Q  G  P    F  LI      G    A +    M  + GC P    YN ++  L   
Sbjct: 129 DAQAAGLQPPTAAFEALIFAHASAGRHHEAVEAFSRMEGEFGCRPTTFVYNAVLRVLVAS 188

Query: 311 GN-LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           G  +  A++L +RMVA+ C+PN  TY  +I+GL K G  VD  ++   M  R    N   
Sbjct: 189 GGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKT 248

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ L+S +   G+ ++A  L   M +KGC P+ V Y+A + GLC+ G+ DEA E L  + 
Sbjct: 249 HTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALR 308

Query: 430 NNGCAANAFT-YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE-VCYSVLIHGLCEDGK 487
           + G        YS L+ G F +G+  +  + + ++ +   V  + V Y+++I G  E G+
Sbjct: 309 HTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGR 368

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
             +A   + +M  +G  PD   Y++++  LC+AG ++ A  L +EM  +      D+ TY
Sbjct: 369 TNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEM--VRNNVVLDIHTY 426

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE------------KLEA 595
             ++  LCK+  +  ++ + + M++ GC P ++T N+ +  L              K+E 
Sbjct: 427 TTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEV 486

Query: 596 PQDGTDFL-----------NELAIRLFKRQRTSG----GFKIVEVMLQKFLSPQTSTWER 640
             + + FL           +E   +L +    SG     +K++  ++   + P   T+  
Sbjct: 487 GNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNT 546

Query: 641 VVQELCRPKRIQAAI 655
           ++  LC+ + +  A+
Sbjct: 547 LLNGLCKVRNLDGAL 561



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 122/514 (23%), Positives = 223/514 (43%), Gaps = 71/514 (13%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
           K+   +  +   A  ++EA  L H+M D+  C     ++N+ L+ + + G    A+E   
Sbjct: 247 KTHTILLSSMCNAGQLKEAENLLHSMEDK-GCPPDEVTYNAFLSGLCKAGRVDEAIE--- 302

Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRL-------GLVDNAIQLFRE-MPVRNCEPDIYTY 230
                  +  L +T TF L +K    L       G  +   Q + E +   +  PDI  Y
Sbjct: 303 ------RLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLY 356

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             ++ G  +  R ++A    DEM+  G  P    +N L+  LC  G+L  A  L+  M  
Sbjct: 357 TIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVR 416

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
              + +  TY T+I GLC +  +D+A+ + D MV   C P+ +TY  +I+GL +  R ++
Sbjct: 417 NNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHR-LE 475

Query: 351 GARVLMSMEERKFHVNEYIYSTL--------------ISGLFKEGKAEDAMKLWKQMMEK 396
            AR+L    E   + + ++  TL              +  + + G+   A KL + +++ 
Sbjct: 476 EARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDS 535

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G  P+ V Y+ L++GLC+V   D A  +  E+   G   +  TY +L+     + + + A
Sbjct: 536 GVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDA 595

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR--------------- 501
           + +++D+  +    +   Y+ ++  LC   KL +A  +W   L R               
Sbjct: 596 LTLFQDILHSGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSAR 655

Query: 502 -----GCKPDVV----------------AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
                GC  + V                 Y+  + GL  AG +E+ALK+F+ +       
Sbjct: 656 KKFEEGCLHEAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDI 715

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            P    +  L   LC + N+  ++D++   + +G
Sbjct: 716 TPACCVH--LSKYLCLEGNLGAAVDVMLYTLKKG 747



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 166/366 (45%), Gaps = 28/366 (7%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +L++   ++GD      ++  M R   V+   ++  +     K  LV+EA+++F  MV
Sbjct: 391 YNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMV 450

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLY--HRALE----FYNHIVNAKHMNILPNTLTFNLV- 198
            E  C  +V ++N     ++ +GLY  HR  E    FY   V       L  TL  N V 
Sbjct: 451 -EVGCHPSVMTYN-----VLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVR 504

Query: 199 --------IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
                   ++++C+ G V  A +L R +      PD+ TY TL++GLCK   LD A+ L 
Sbjct: 505 DSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLF 564

Query: 251 DEMQVDGCFP-TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            E+QV G FP   +T+  LI+ L +      A  L  ++   G  P+   YN+++  LC 
Sbjct: 565 RELQVKG-FPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCR 623

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL---GRAVDGARVLMSMEERKFHVN 366
              L +A++L    +  K   N +    +I+   K    G   +  R L+ +++    VN
Sbjct: 624 MQKLSQAINLWFDHLPRKY--NLLAQDEVISSARKKFEEGCLHEAVRELIKIDQEYGSVN 681

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+  + GL + G+ EDA+K++  + E G          L   LC  G    A +++ 
Sbjct: 682 SCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNLGAAVDVML 741

Query: 427 EMINNG 432
             +  G
Sbjct: 742 YTLKKG 747


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/392 (31%), Positives = 208/392 (53%), Gaps = 10/392 (2%)

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFN 266
           +VD+ +  F  + +    P I  +  ++  L K      A+ L  +M+V G  P  VT N
Sbjct: 45  VVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLN 104

Query: 267 VLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +LIN  C  G++  +  ++  +   G  P+ +T NTL+ GLCLKG + +++   D++VA 
Sbjct: 105 ILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQ 164

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
               N+V+YGT++NGL K+G      ++L  +E+R    +  +YST+I GL K+     A
Sbjct: 165 GFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQA 224

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
              + +M  +G  PN + YS LI G C  G+   A  +L EMI      N +TY+ L+  
Sbjct: 225 YDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDA 284

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             + GK  +A ++  +M       + V Y+ ++ GLC+   L +A  ++ +M   G +P+
Sbjct: 285 LCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPN 344

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEML----CLEPKSQPDVFTYNILLNALCKQSNISH 562
              Y+++I GLC  G ++ A KLF  +L    C+      DV TYN++++ LCK+     
Sbjct: 345 KYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCI------DVRTYNVMISGLCKEGMFDK 398

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
           ++ + + M D GC P+ VT +I + +L EK E
Sbjct: 399 ALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDE 430



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/403 (28%), Positives = 204/403 (50%), Gaps = 4/403 (0%)

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
           ++V++ +  F+ ++   H    ++ F  +L  +++   Y  A+     +   +   I PN
Sbjct: 44  NVVDDTVSQFNRLLLVRHTPPIIE-FGKILGYLVKMKHYPTAISLSRQM---EVKGIEPN 99

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +T N++I   C LG +  +  +  ++     +PD  T  TLM GLC +  +  ++   D
Sbjct: 100 LVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHD 159

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           ++   G     V++  L+NGLCK GE   A KL+  +  +   P+ V Y+T+I GLC   
Sbjct: 160 KVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDK 219

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            +++A      M A    PN +TY T+I G    G+ +    +L  M  +  + N Y Y+
Sbjct: 220 IVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYN 279

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI  L KEGK ++A KL  +M  KG   + V Y++++DGLC+    D+A  +  +M   
Sbjct: 280 ILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKW 339

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N +TY++L+ G  + G+   A ++++ +    C  +   Y+V+I GLC++G   +A
Sbjct: 340 GIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKA 399

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
             + ++M   GC P+ V +  +I  L      ++A KL + M+
Sbjct: 400 LAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMI 442



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 166/313 (53%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T+T N ++K +C  G V  ++    ++  +  + +  +Y TL++GLCK      AV L
Sbjct: 133 PDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKL 192

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L  ++     P  V ++ +I+GLCK+  + +A      M  +G  PN +TY+TLI G CL
Sbjct: 193 LRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCL 252

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G L  A SLL+ M+     PN  TY  +I+ L K G+  +  ++L  M  +    +   
Sbjct: 253 AGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVT 312

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++++ GL K    + A  L+ +M + G +PN   Y+ALIDGLC+ G+   A+++   ++
Sbjct: 313 YNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLL 372

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             GC  +  TY+ ++ G  + G   KA+ +   M  N C+ N V + ++I  L E  +  
Sbjct: 373 VKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDEND 432

Query: 490 EARMVWTQMLSRG 502
           +A  +   M+++G
Sbjct: 433 KAEKLLHGMIAKG 445



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 171/372 (45%), Gaps = 40/372 (10%)

Query: 61  SEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS 120
            +  FS  +     KLG YQ    T  +L++     G+ K       ++  +   + + S
Sbjct: 114 GQMAFSFSVLGKILKLG-YQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVS 172

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +     K      A++L   M+++   +  V  ++++++ + ++ + ++A +F++ +
Sbjct: 173 YGTLLNGLCKIGETRCAVKLLR-MIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEM 231

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
            NA+   I PN +T++ +I   C  G +  A  L  EM ++N  P++YTY  L+D LCKE
Sbjct: 232 -NAR--GIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKE 288

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            ++ EA  LL EM   G     VT+N +++GLCK+  L +A  L   M   G  PN+ TY
Sbjct: 289 GKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTY 348

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
             LI GLC  G L  A  L   ++   C  +  TY  +I                     
Sbjct: 349 TALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMI--------------------- 387

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
                         SGL KEG  + A+ +  +M + GC PN V +  +I  L    + D+
Sbjct: 388 --------------SGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDK 433

Query: 421 AEEILFEMINNG 432
           AE++L  MI  G
Sbjct: 434 AEKLLHGMIAKG 445



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 92/175 (52%), Gaps = 4/175 (2%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  A  K   V+EA +L   M  +      V ++NSVL+ + +     +A   +  
Sbjct: 277 TYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVV-TYNSVLDGLCKSQNLDKATALF-- 333

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
            +  K   I PN  T+  +I  +C+ G + NA +LF+ + V+ C  D+ TY  ++ GLCK
Sbjct: 334 -MKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCK 392

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           E   D+A+ +  +M+ +GC P  VTF+++I  L +  E  +A KL+  M  KG L
Sbjct: 393 EGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGLL 447



 Score = 80.1 bits (196), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 60/285 (21%), Positives = 125/285 (43%), Gaps = 58/285 (20%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +  ++  L K      A+ L +QM  KG +PN V  + LI+  C +G+   +  +L +++
Sbjct: 68  FGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKIL 127

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  T ++LMKG                                   LC  G+++
Sbjct: 128 KLGYQPDTITLNTLMKG-----------------------------------LCLKGEVK 152

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            +     +++++G + + V+Y ++++GLC  G    A+KL    +  +  ++PDV  Y+ 
Sbjct: 153 RSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLR--MIEDRSTRPDVVMYST 210

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           +++ LCK   ++ + D  + M  RG  P+++T +  +                   LA +
Sbjct: 211 IIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFC---------------LAGQ 255

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           L       G F ++  M+ K ++P   T+  ++  LC+  +++ A
Sbjct: 256 LM------GAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEA 294


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 152/539 (28%), Positives = 247/539 (45%), Gaps = 89/539 (16%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVR-NCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           TFN+++   C  G +++A+ +   M    N  PD  TY T++  + K+ RL +   LL +
Sbjct: 206 TFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLD 265

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M+ +G  P  VT+N L+ G CK G L  A ++V+ M     LP+  TYN LI+G+C  G+
Sbjct: 266 MKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGS 325

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME------------- 359
           + + + L+D M + K  P+ VTY T+I+G  +LG +++  +++  ME             
Sbjct: 326 IREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVKPNQVTHNI 385

Query: 360 --------ERKFHVNEYI---------------YSTLISGLFKEGKAEDAMKLWKQMMEK 396
                   E++  V   +               Y TLI    K G    A+++ ++M +K
Sbjct: 386 SLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G K NT+  + ++D LC+  K DEA  +L      G   +  TY +L+ G+F   K  KA
Sbjct: 446 GIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKA 505

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            E+W +M +         ++ LI GLC  GK   A   + ++   G  PD   ++S+I G
Sbjct: 506 FEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILG 565

Query: 517 LCNAGSVEEALKLFNEM------------------LCLEPKSQP--------------DV 544
            C  G VE+A + +NE                   LC E  ++               D 
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITEREVDT 625

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
            TYN +++A CK   +  + DLL+ M ++  +PD  T N  +T+L E      DG   L+
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLME------DGK--LS 677

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS-----------TWERVVQELCRPKRIQ 652
           E A  L K+     G     + L+   +P TS            +  V+ ELC   R++
Sbjct: 678 E-ADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELKTEAIAYSDVINELCSRGRLK 735



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 237/483 (49%), Gaps = 38/483 (7%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF-- 176
           K+F  +   Y     +E+A+ +   MV EF+      ++N++L  + ++G      +   
Sbjct: 205 KTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLL 264

Query: 177 -------------YNHIVNA-----------------KHMNILPNTLTFNLVIKTVCRLG 206
                        YN++V                   K  NILP+  T+N++I  VC  G
Sbjct: 265 DMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAG 324

Query: 207 LVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD-EAVLLLDEMQVDGCFPTPVTF 265
            +   ++L   M     +PD+ TY TL+DG C E  L  EA  L+++M+ DG  P  VT 
Sbjct: 325 SIREGLELMDVMKSLKLQPDVVTYNTLIDG-CFELGLSLEAKKLMEQMENDGVKPNQVTH 383

Query: 266 NVLINGLCKNGELGRAAKLVDNMF-LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           N+ +  LCK  +     + V  +  + G  P+ VTY+TLI      G+L  A+ ++  M 
Sbjct: 384 NISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMG 443

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                 N +T  TI++ L K  +  +   +L S  +R + V+E  Y TLI G F+E K E
Sbjct: 444 QKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVE 503

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A ++W +M      P    +++LI GLC  GK + A E   E+  +G   +  T++S++
Sbjct: 504 KAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSII 563

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            G+ + G+  KA E + +  K++   +    ++L++GLC++G   +A   +  +++   +
Sbjct: 564 LGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITER-E 622

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            D V Y++MI   C    ++EA  L +EM   E + +PD FTYN ++ +L +   +S + 
Sbjct: 623 VDTVTYNTMISAFCKDKKLKEAYDLLSEM--EEKRLEPDRFTYNSIITSLMEDGKLSEAD 680

Query: 565 DLL 567
           +LL
Sbjct: 681 ELL 683



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 138/560 (24%), Positives = 244/560 (43%), Gaps = 94/560 (16%)

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL------- 237
           H++  P+   F++ +      G    A+Q+F++M     +P++ T  TL+ GL       
Sbjct: 124 HLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183

Query: 238 -------------------------------CKENRLDEAVLLLDEMQVD-GCFPTPVTF 265
                                          C E +L++A+ +L+ M  +    P  VT+
Sbjct: 184 SIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTY 243

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N ++  + K G L     L+ +M   G +PN VTYN L++G C  G+L +A  +++ M  
Sbjct: 244 NTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +  +P+  TY  +ING+   G   +G  ++  M+  K   +   Y+TLI G F+ G + +
Sbjct: 304 TNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYSSLM 444
           A KL +QM   G KPN V ++  +  LC+  K +E    + E++  +G + +  TY +L+
Sbjct: 364 AKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLI 423

Query: 445 KGFFESGKGHKAVEIWKDMA-----------------------------------KNNCV 469
           K + + G    A+E+ ++M                                    K   +
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYI 483

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            +EV Y  LI G   + K+ +A  +W +M      P V  ++S+I GLC+ G  E A++ 
Sbjct: 484 VDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEK 543

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           F+E+   E    PD  T+N ++   CK+  +  + +  N  +     PD  TCNI L  L
Sbjct: 544 FDEL--AESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601

Query: 590 -KEKLEAPQDGTDFLNEL-------------AIRLF-KRQRTSGGFKIVEVMLQKFLSPQ 634
            KE +   +   +F N L              I  F K ++    + ++  M +K L P 
Sbjct: 602 CKEGM--TEKALNFFNTLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPD 659

Query: 635 TSTWERVVQELCRPKRIQAA 654
             T+  ++  L    ++  A
Sbjct: 660 RFTYNSIITSLMEDGKLSEA 679



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 163/336 (48%), Gaps = 13/336 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ +T++ +IK   ++G +  A+++ REM  +  + +  T  T++D LCKE ++DEA  L
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNL 473

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           LD     G     VT+  LI G  +  ++ +A ++ D M      P   T+N+LI GLC 
Sbjct: 474 LDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCH 533

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G  + A+   D +  S  +P++ T+ +II G  K GR            +  F  + Y 
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            + L++GL KEG  E A+  +  ++ +  + +TV Y+ +I   C+  K  EA ++L EM 
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
                 + FTY+S++    E GK  +A E+ K             +S     +  +  L 
Sbjct: 653 EKRLEPDRFTYNSIITSLMEDGKLSEADELLKK------------FSGKFGSMKRNLHLE 700

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
             +   T       K + +AYS +I+ LC+ G ++E
Sbjct: 701 TEKNPATSESKEELKTEAIAYSDVINELCSRGRLKE 736



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/212 (29%), Positives = 107/212 (50%), Gaps = 13/212 (6%)

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           +V E ++  +   Y +   VE+A  ++  M        TV +FNS++  +   G    A+
Sbjct: 483 IVDEVTYGTLIMGYFREEKVEKAFEMWDEM-KRIKITPTVTTFNSLIGGLCHHGKTELAM 541

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E ++ +  +    +LP+  TFN +I   C+ G V+ A + + E    + +PD YT   L+
Sbjct: 542 EKFDELAES---GLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598

Query: 235 DGLCKENRLDEAV----LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
           +GLCKE   ++A+     L+ E +VD      VT+N +I+  CK+ +L  A  L+  M  
Sbjct: 599 NGLCKEGMTEKALNFFNTLITEREVD-----TVTYNTMISAFCKDKKLKEAYDLLSEMEE 653

Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           K   P+  TYN++I  L   G L +A  LL +
Sbjct: 654 KRLEPDRFTYNSIITSLMEDGKLSEADELLKK 685


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 156/546 (28%), Positives = 256/546 (46%), Gaps = 15/546 (2%)

Query: 59  AKSEQPFSDEIFNSTPKLGSYQLGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVL 117
           AK      D + + TP+LG   + D   YS L++   + G     + +L RM  E   V 
Sbjct: 162 AKRTDEALDILLHRTPELGC--VPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVC 218

Query: 118 EKSFIF---IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
             + +    +   + K   V +A  LF  MV        + ++NSV++ + +     +A 
Sbjct: 219 SPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQR-GIPPDLVTYNSVVHALCKARAMDKAE 277

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
            F   +VN +   +LPN  T+N +I      G    A+++F+EM   +  PD+ T   LM
Sbjct: 278 AFLRQMVNKR---VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLM 334

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             LCK  ++ EA  + D M + G  P   ++N+++NG    G L     L D M   G  
Sbjct: 335 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 394

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+  T+N LI      G LDKA+ + + M      P+ VTY T+I  L ++G+  D    
Sbjct: 395 PDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 454

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M ++    ++Y Y+ LI G    G    A +L  ++M  G   + V +S++I+ LC+
Sbjct: 455 FNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCK 514

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +G+  +A+ I    +N G   +A  Y+ LM G+   GK  KA+ ++  M       N V 
Sbjct: 515 LGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVG 574

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y  L++G C+ G++ E   ++ +ML RG KP  + YS +I GL  AG    A   F+EM 
Sbjct: 575 YGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEM- 633

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEK 592
             E     D+ TYNI+L  L K      +I L   +       +++T N  +  +    +
Sbjct: 634 -TESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 692

Query: 593 LEAPQD 598
           +E  +D
Sbjct: 693 VEEAKD 698



 Score =  201 bits (512), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 136/492 (27%), Positives = 250/492 (50%), Gaps = 12/492 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREK---RVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI  Y+++G +K    V   MRR      VV     +     YGK   ++EA  +F
Sbjct: 294 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGK---IKEARDVF 350

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
            TM  +      V S+N +LN    +G      + ++ ++      I P+  TFN++IK 
Sbjct: 351 DTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD---GIAPDFYTFNVLIKA 406

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
               G++D A+ +F EM     +PD+ TY T++  LC+  ++D+A+   ++M   G  P 
Sbjct: 407 YANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPD 466

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
              +N LI G C +G L +A +L+  +   G   + V ++++I+ LC  G +  A ++ D
Sbjct: 467 KYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFD 526

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             V     P+ V Y  +++G   +G+     RV  +M       N   Y TL++G  K G
Sbjct: 527 LTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIG 586

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + ++ + L+++M+++G KP+T++YS +IDGL   G+   A+    EM  +G A +  TY+
Sbjct: 587 RIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYN 646

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            +++G F++    +A+ ++K++   N   N +  + +I G+ +  ++ EA+ ++  +   
Sbjct: 647 IVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 706

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
              P VV YS MI  L   G VEEA  +F+ M       +P+    N ++  L K++ I 
Sbjct: 707 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPNSRLLNHVVRELLKKNEIV 764

Query: 562 HSIDLLNSMMDR 573
            +   L+ + +R
Sbjct: 765 RAGAYLSKIDER 776



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/526 (24%), Positives = 256/526 (48%), Gaps = 48/526 (9%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHI 180
           +  A  KA  +++A      MV+    KR +    ++N+++      G +  A+  +  +
Sbjct: 263 VVHALCKARAMDKAEAFLRQMVN----KRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM 318

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +  +ILP+ +T ++++ ++C+ G +  A  +F  M ++   PD+++Y  +++G   +
Sbjct: 319 ---RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 375

Query: 241 N-----------------------------------RLDEAVLLLDEMQVDGCFPTPVTF 265
                                                LD+A+++ +EM+  G  P  VT+
Sbjct: 376 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 435

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
             +I  LC+ G++  A +  + M  +G  P++  YN LI G C  G+L KA  L+  ++ 
Sbjct: 436 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 495

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +    + V + +IIN L KLGR +D   +         H +  +Y+ L+ G    GK E 
Sbjct: 496 NGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEK 555

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A++++  M+  G +PN V Y  L++G C++G+ DE   +  EM+  G   +   YS ++ 
Sbjct: 556 ALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIID 615

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G FE+G+   A   + +M ++    +   Y++++ GL ++    EA  ++ ++ +   K 
Sbjct: 616 GLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKI 675

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           +++  ++MI G+     VEEA  LF  +     +  P V TY+I++  L K+  +  + D
Sbjct: 676 NIITLNTMIDGMFQTRRVEEAKDLFASIS--RSRLVPSVVTYSIMITNLIKEGLVEEAED 733

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           + +SM + GC+P+    N  +  L +K E  + G  +L+++  R F
Sbjct: 734 MFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGA-YLSKIDERNF 778



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 203/395 (51%), Gaps = 7/395 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-L 248
           P + T+ +++    R    + A+  F ++       +I     L++G C+  R DEA+ +
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHG 306
           LL      GC P   ++++L+  LC  G+ G+A  L+  M   G  C PN V YNT+I G
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSMEERKFHV 365
              +G+++KA  L   MV     P+ VTY ++++ L K  RA+D A   L  M  ++   
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK-ARAMDKAEAFLRQMVNKRVLP 290

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N + Y+ LI G    G+ ++A++++K+M      P+ V  S L+  LC+ GK  EA ++ 
Sbjct: 291 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVF 350

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
             M   G   + F+Y+ ++ G+   G      +++  M  +    +   ++VLI      
Sbjct: 351 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANC 410

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G L +A +++ +M   G KPDVV Y ++I  LC  G +++A++ FN+M  ++    PD +
Sbjct: 411 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQM--IDQGVAPDKY 468

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
            YN L+   C   ++  + +L++ +M+ G   D+V
Sbjct: 469 AYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 503



 Score =  119 bits (297), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/355 (24%), Positives = 154/355 (43%), Gaps = 66/355 (18%)

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R      + Y+ L+    +  + E A+  + Q++  G + N ++ + L++G C   + DE
Sbjct: 108 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDE 167

Query: 421 AEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN--CVYNEVCYSV 477
           A +IL       GC  + F+YS L+K   + GK  +A ++ + MA+    C  N V Y+ 
Sbjct: 168 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNT 227

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA----------------- 520
           +I G  ++G + +A  ++ +M+ RG  PD+V Y+S++H LC A                 
Sbjct: 228 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 287

Query: 521 ------------------GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
                             G  +EA+++F EM        PDV T ++L+ +LCK   I  
Sbjct: 288 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM--RRHSILPDVVTLSMLMGSLCKYGKIKE 345

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
           + D+ ++M  +G +PD+ + NI L     K     D TD  +     L      +  F  
Sbjct: 346 ARDVFDTMAMKGQNPDVFSYNIMLNGYATK-GCLVDMTDLFD-----LMLGDGIAPDFYT 399

Query: 623 VEVMLQKF--------------------LSPQTSTWERVVQELCRPKRIQAAINK 657
             V+++ +                    + P   T+  V+  LCR  ++  A+ K
Sbjct: 400 FNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEK 454


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 159/589 (26%), Positives = 243/589 (41%), Gaps = 99/589 (16%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF-IFIFKAYG-----KAHLVEEAIR 139
           F SL+  Y  SGD      +L +M +         + I I    G       HL+E A +
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEK 434

Query: 140 LFHTMVDEFHC--KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
            +  M+       K  V SF   L      G Y +A      ++       +P+T T++ 
Sbjct: 435 AYSEMLATGVVLNKINVSSFTRCL---CSAGKYEKAFSVIREMIG---QGFIPDTSTYSK 488

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           V+  +C    ++ A  LF EM       D+YTY  ++D  CK   +++A    +EM+  G
Sbjct: 489 VLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVG 548

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           C P  VT+  LI+   K  ++  A +L + M  +GCLPN VTY+ LI G C  G ++KA 
Sbjct: 549 CTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKAC 608

Query: 318 SLLDRMVASK-------------------------------------------------- 327
            + +RM  SK                                                  
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSM 668

Query: 328 --CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
             C PN++ Y  +I+GL K+G+  +   V   M E  F    Y YS+LI   FK  + + 
Sbjct: 669 EGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDL 728

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A K+  +M+E  C PN V+Y+ +IDGLC+VGK DEA +++  M   GC  N  TY++++ 
Sbjct: 729 ASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMID 788

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           GF   GK    +E+ + M       N V Y VLI   C++G L  A  +  +M       
Sbjct: 789 GFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPT 848

Query: 506 DVVAYSSMIHG---------------------------------LCNAGSVEEALKLFNE 532
               Y  +I G                                 L  A  +E AL+L  E
Sbjct: 849 HAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEE 908

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +            TYN L+ +LC  + +  +  L + M  +G  P++ T
Sbjct: 909 VATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQT 957



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/571 (25%), Positives = 257/571 (45%), Gaps = 78/571 (13%)

Query: 157 FNSVLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           F   LNV++++    G +  ALE    +   K     P+  T+N +I+   +   +D+A 
Sbjct: 199 FGEFLNVLVRKYCRSGSFSIALE---ELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSAS 255

Query: 213 QLFREMPVRN---------------CE-----------------PDIYTYCTLMDGLCKE 240
            + REM + N               C+                 PD   Y  L+ GLC+ 
Sbjct: 256 LVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMETENFVPDTVFYTKLISGLCEA 315

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
           +  +EA+  L+ M+   C P  VT++ L+ G     +LGR  ++++ M ++GC P+   +
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+L+H  C  G+   A  LL +MV     P  V Y  +I  +   G     +  L+ + E
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSIC--GDKDSLSCHLLELAE 433

Query: 361 RKFH--------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           + +         +N+   S+    L   GK E A  + ++M+ +G  P+T  YS ++  L
Sbjct: 434 KAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYL 493

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   K + A  +  EM   G  A+ +TY+ ++  F ++G   +A + + +M +  C  N 
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+ LIH   +  K+  A  ++  MLS GC P++V YS++I G C AG +E+A ++F  
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFER 613

Query: 533 MLCL---------------EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           M                  +   +P+V  Y  LL+  CK   +  +  LL++M   GC+P
Sbjct: 614 MCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEP 673

Query: 578 DLVTCNIFLTALKE--KLEAPQDGTDFLNE------------LAIRLFKRQRTSGGFKIV 623
           + +  +  +  L +  KL+  Q+    ++E            L  R FK +R     K++
Sbjct: 674 NQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVL 733

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             ML+   +P    +  ++  LC+  +   A
Sbjct: 734 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEA 764



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/527 (24%), Positives = 226/527 (42%), Gaps = 81/527 (15%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N +P+T+ +  +I  +C   L + A+     M   +C P++ TY TL+ G   + +L   
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             +L+ M ++GC+P+P  FN L++  C +G+   A KL+  M   G  P  V YN LI  
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGS 416

Query: 307 -----------------------------------------LCLKGNLDKAVSLLDRMVA 325
                                                    LC  G  +KA S++  M+ 
Sbjct: 417 ICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
              +P+  TY  ++  L    +      +   M+      + Y Y+ ++    K G  E 
Sbjct: 477 QGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A K + +M E GC PN V Y+ALI    +  K   A E+   M++ GC  N  TYS+L+ 
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596

Query: 446 GFFESGKGHKAVEIWKDMAKNNCV-----------------YNEVCYSVLIHGLCEDGKL 488
           G  ++G+  KA +I++ M  +  V                  N V Y  L+ G C+  ++
Sbjct: 597 GHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRV 656

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            EAR +   M   GC+P+ + Y ++I GLC  G ++EA ++  EM   E      ++TY+
Sbjct: 657 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEM--SEHGFPATLYTYS 714

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
            L++   K      +  +L+ M++  C P++V                        E+  
Sbjct: 715 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVV---------------------IYTEMID 753

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            L K  +T   +K++++M +K   P   T+  ++    R  +I+  +
Sbjct: 754 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCL 800



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 122/507 (24%), Positives = 213/507 (42%), Gaps = 92/507 (18%)

Query: 76  LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYR-MRREKRVVLEKSFIFIFKAYGKAHLV 134
           +G   + D++ YS +  Y  +     L  +L+  M+R   V    ++  +  ++ KA L+
Sbjct: 475 IGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLI 534

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           E+A + F+ M  E  C   V ++ ++++  ++      A E +  +++      LPN +T
Sbjct: 535 EQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE---GCLPNIVT 590

Query: 195 FNLVIKTVCRLGLVDNAIQLFREM----------------PVRNCE-PDIYTYCTLMDGL 237
           ++ +I   C+ G ++ A Q+F  M                   N E P++  Y  L+DG 
Sbjct: 591 YSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGF 650

Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA---------------- 281
           CK +R++EA  LLD M ++GC P  + ++ LI+GLCK G+L  A                
Sbjct: 651 CKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATL 710

Query: 282 -------------------AKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
                              +K++  M    C PN V Y  +I GLC  G  D+A  L+  
Sbjct: 711 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 770

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M    C PN VTY  +I+G  ++G+      +L  M  +    N   Y  LI    K G 
Sbjct: 771 MEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 830

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDG-----------LCRVGKPDEAE--------- 422
            + A  L ++M +     +   Y  +I+G           L  +G+ D A          
Sbjct: 831 LDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLV 890

Query: 423 ---------EILFEMINNGCAANAF------TYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
                    E+   ++      +A       TY+SL++    + K  KA  ++ +M+K  
Sbjct: 891 DNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKG 950

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMV 494
            +     +  LI GL  + K+ EA ++
Sbjct: 951 VIPEMQTFCSLIKGLFRNSKISEALLL 977



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 133/340 (39%), Gaps = 56/340 (16%)

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           +Y+ L+  + ++   +   +L +Q+ +   +      + L+   CR G    A E L  +
Sbjct: 167 VYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIALEELGRL 226

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            +     +  TY+ L++ F ++     A  + ++M+  N   +        + LC+ GK 
Sbjct: 227 KDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKW 286

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML-------------- 534
           REA    T M +    PD V Y+ +I GLC A   EEA+   N M               
Sbjct: 287 REA---LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTL 343

Query: 535 ---CLEPKS----------------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
              CL  K                  P    +N L++A C   + S++  LL  M+  G 
Sbjct: 344 LCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH 403

Query: 576 DPDLVTCNIF--------------LTALKEKLEAPQDGTD-FLNELAIRLFKRQRTSGG- 619
            P  V  NI               L  L EK  +    T   LN++ +  F R   S G 
Sbjct: 404 TPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGK 463

Query: 620 ----FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
               F ++  M+ +   P TST+ +V+  LC   +++ A 
Sbjct: 464 YEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAF 503



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 94/222 (42%), Gaps = 39/222 (17%)

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +EA +L   M++E  C+  V ++ ++++   + G     LE    + +     + PN +T
Sbjct: 762 DEAYKLMQ-MMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSK---GVAPNYVT 817

Query: 195 FNLVIKTVCRLGLVDNAIQLFREM-----PVR---------------------------- 221
           + ++I   C+ G +D A  L  EM     P                              
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQD 877

Query: 222 NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC--FPTPVTFNVLINGLCKNGELG 279
           +  P +  Y  L+D L K  RL+ A+ LL+E+            T+N LI  LC   ++ 
Sbjct: 878 DTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVD 937

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
           +A +L   M  KG +P   T+ +LI GL     + +A+ LLD
Sbjct: 938 KAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLD 979


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 216/416 (51%), Gaps = 3/416 (0%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++  FN VL  I +  +Y   +  +  I NA+ + I P+  T N+++   CR     +A+
Sbjct: 9   SIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSAL 68

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
               +M     EPDI T  +L++G C  N + +AV +  +M+  G     V   +LI+ L
Sbjct: 69  SYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTL 128

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CKN  +  A +++  M  +G  PN VTY++LI GLC  G L  A   L  M + K  PN 
Sbjct: 129 CKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNV 188

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           +T+  +I+   K G+      V   M +     N + YS+LI GL    + ++A+K+   
Sbjct: 189 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 248

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M+ KGC PN V YS L +G  +  + D+  ++L +M   G AAN  + ++L+KG+F++GK
Sbjct: 249 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 308

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A+ ++  M  N  + N   Y++++ GL  +G++ +A   +  M       D++ Y+ 
Sbjct: 309 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 368

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           MIHG+C A  V+EA  LF ++     + +PD   Y I++  L  ++ +    D LN
Sbjct: 369 MIHGMCKACMVKEAYDLFYKLKF--KRVEPDFKAYTIMIAEL-NRAGMRTEADALN 421



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 23/274 (8%)

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           +   A+    +MM+ G +P+ V  S+L++G C      +A  +  +M   G   +    +
Sbjct: 63  QPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDT 122

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            L+    ++     A+E+ K M       N V YS LI GLC+ G+L +A     +M S+
Sbjct: 123 ILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 182

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
              P+V+ +S++I      G + +   ++  M+  +    P+VFTY+ L+  LC  + + 
Sbjct: 183 KINPNVITFSALIDAYAKRGKLSKVDSVYKMMI--QMSIDPNVFTYSSLIYGLCMHNRVD 240

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFK 621
            +I +L+ M+ +GC P++VT                      + LA   FK  R   G K
Sbjct: 241 EAIKMLDLMISKGCTPNVVT---------------------YSTLANGFFKSSRVDDGIK 279

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +++ M Q+ ++  T +   +++   +  +I  A+
Sbjct: 280 LLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 313


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 219/448 (48%), Gaps = 16/448 (3%)

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           VD   C   + +F+       ++G  +RA  ++   V    M + PN + F+ +I  +C+
Sbjct: 261 VDNATCTLMISTFS-------EKGFVNRAFWYFKKWV---QMGLNPNLINFSSLINGLCK 310

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-LLLDEMQVDGCFPTPV 263
           +G +  A ++  EM  +  +P++YT+  L+DGLCK+   ++A  L L  ++ D   P   
Sbjct: 311 IGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVY 370

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+  +ING CK  +L RA  L+  M  +G +PN  TY  LI G C  GN  +A  L+D M
Sbjct: 371 TYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLM 430

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
                 PN  TY  II+GL K GR  +  ++L    +   H ++  Y+ LIS   ++   
Sbjct: 431 GKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDN 490

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A+ ++ +M + G +P+   Y+ LI   CR  K +E+E++  E +  G      TY+S+
Sbjct: 491 KQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSM 550

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G+   G    A++ +  M    C  + + Y  LI GLC + KL EA  ++  M+  G 
Sbjct: 551 ICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGL 610

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P  V   ++ +  C  G    A+ +      LE K    + T N L+  LC +  +  +
Sbjct: 611 SPCEVTRVTLAYEYCKQGDSATAMIILER---LEKKLW--IRTVNTLIRKLCSEKKVGVA 665

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKE 591
               + ++D+  + D +T   F TA  E
Sbjct: 666 ALFFHKLLDKDLNVDRITLAAFTTACYE 693



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 203/416 (48%), Gaps = 3/416 (0%)

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E  N ++  ++  ++      N VI     LG VD A ++F EM  R   PD  +Y  ++
Sbjct: 176 EAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMV 235

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            G C+  R+ +    L +M   G      T  ++I+   + G + RA          G  
Sbjct: 236 VGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLN 295

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN + +++LI+GLC  G++ +A  +L+ MV     PN  T+  +I+GL K G      R+
Sbjct: 296 PNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRL 355

Query: 355 LMSM-EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
            + +     +  N Y Y+ +I+G  KE K   A  L  +M E+G  PNT  Y+ LIDG C
Sbjct: 356 FLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHC 415

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           + G    A E++  M   G   N FTY++++ G  + G+  +A ++ +   K+    ++V
Sbjct: 416 KAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKV 475

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y++LI   C     ++A  ++++M   G +PD+  Y+ +I   C    VEE+ KLF E 
Sbjct: 476 TYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEA 535

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + L     P   TY  ++   C+  +IS +I   + M D GC PD +T    ++ L
Sbjct: 536 VGL--GLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGL 589



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 186/388 (47%), Gaps = 24/388 (6%)

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
           ++    + G+L  A  +V  M   G +      N +I      G +D A  + D M+   
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
            +P+  +Y  ++ G  ++GR  D  R L  M ER + V+    + +IS   ++G    A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
             +K+ ++ G  PN + +S+LI+GLC++G   +A E+L EM+  G   N +T+++L+ G 
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 448 FESGKGHKAVEIWKDMAK-NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
            + G   KA  ++  + + +N   N   Y+ +I+G C++ KL  A M+  +M  +G  P+
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
              Y+ +I G C AG+   A +L + M   +    P++FTYN +++ LCK+     +  L
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLM--GKEGFTPNIFTYNAIIDGLCKKGRFPEAYKL 461

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
           L   +  G   D VT  I ++    + +         N+ A+ +F R            M
Sbjct: 462 LRRGLKSGLHADKVTYTILISEFCRQTD---------NKQALAIFSR------------M 500

Query: 627 LQKFLSPQTSTWERVVQELCRPKRIQAA 654
            +  L P   T+  ++   CR K+++ +
Sbjct: 501 FKVGLQPDMHTYNVLIATFCRQKKVEES 528



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/343 (22%), Positives = 163/343 (47%), Gaps = 37/343 (10%)

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           NLD+A  ++  MV S                 ++G+  +   +++ M+     +   I +
Sbjct: 153 NLDRATEVMQCMVRS---------------FSEIGKLKEAVNMVIEMQNHGLVLKARILN 197

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +I      G  + A K++ +M+++   P++  Y  ++ G CR+G+  + +  L +MI  
Sbjct: 198 FVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIER 257

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G A +  T + ++  F E G  ++A   +K   +     N + +S LI+GLC+ G +++A
Sbjct: 258 GYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQA 317

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +  +M+ +G KP+V  ++++I GLC  G  E+A +LF + L      +P+V+TY  ++
Sbjct: 318 FEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLK-LVRSDNYKPNVYTYTCMI 376

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           N  CK+  ++ +  LL  M ++G  P+    N +   +    +A   G            
Sbjct: 377 NGYCKEEKLNRAEMLLIRMKEQGLVPN---TNTYTCLIDGHCKAGNFGR----------- 422

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                   ++++++M ++  +P   T+  ++  LC+  R   A
Sbjct: 423 -------AYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEA 458



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/331 (24%), Positives = 151/331 (45%), Gaps = 7/331 (2%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
           +Y+    T+  +I  Y         EM+L RM+ +  V    ++  +   + KA     A
Sbjct: 364 NYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRA 423

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
             L   M  E      + ++N++++ + ++G   R  E Y  +       +  + +T+ +
Sbjct: 424 YELMDLMGKEGFTP-NIFTYNAIIDGLCKKG---RFPEAYKLLRRGLKSGLHADKVTYTI 479

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I   CR      A+ +F  M     +PD++TY  L+   C++ +++E+  L +E    G
Sbjct: 480 LISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLG 539

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             PT  T+  +I G C++G +  A K    M   GC P+ +TY  LI GLC +  LD+A 
Sbjct: 540 LLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEAC 599

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            L + M+ +   P EVT  T+     K G +   A +++   E+K  +     +TLI  L
Sbjct: 600 QLYETMIDNGLSPCEVTRVTLAYEYCKQGDSAT-AMIILERLEKKLWIR--TVNTLIRKL 656

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
             E K   A   + ++++K    + +  +A 
Sbjct: 657 CSEKKVGVAALFFHKLLDKDLNVDRITLAAF 687


>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 642

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 136/467 (29%), Positives = 235/467 (50%), Gaps = 6/467 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + KA G+A +V +A+ +F+       CK T  ++NSV+ +++QEG + +  E Y  + N 
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGR-KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCN- 225

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
              +  P+T+T++ +I +  +LG  D+AI+LF EM     +P    Y TL+    K  ++
Sbjct: 226 -EGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKV 284

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           ++A+ L +EM+  GC PT  T+  LI GL K G +  A  L  NM   G  P+ V  N L
Sbjct: 285 EKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNL 344

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERK 362
           ++ L   G L++  ++ + M   +C P  V+Y T+I  L +    V         M+   
Sbjct: 345 MNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADG 404

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
              +E+ YS LI G  K  + E A+ L ++M EKG  P    Y +LI+ L +  + + A 
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           E+  E+  N    ++  Y+ ++K F + GK  +AV+++ +M       +   Y+ L+ G+
Sbjct: 465 ELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            + G + EA  +  +M   GC  D+ +++ +++G    G    A+++F  M     K  P
Sbjct: 525 VKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGVPRRAIEMFETMKHCGIK--P 582

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           D  TYN LL           +  L+  M D+G + D +T +  L A+
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARLMREMKDKGFEYDAITYSSILDAV 629



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 132/513 (25%), Positives = 223/513 (43%), Gaps = 54/513 (10%)

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           +L++ FI I K +      E+A+ +    VD     R++   +  +NV IQ         
Sbjct: 62  MLDERFIRIVKIFKWGPDAEKALEVLKLKVDH-RLVRSILEIDVEINVKIQ--------- 111

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI--YTYCTL 233
           F+      K  N   +  T+  +I+ +    L     +  +E+ VRN    +       L
Sbjct: 112 FFKWA--GKRRNFQHDCSTYMALIRCLEEARLYGEMYRTIQEV-VRNTYVSVGPVVLSEL 168

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG- 292
           +  L +   + +A+ +  + +   C PT  T+N +I  L + G+  +  ++   M  +G 
Sbjct: 169 VKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGD 228

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
           C P+ +TY+ LI      G  D A+ L D M  +   P E  Y T++    K+G+     
Sbjct: 229 CFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKAL 288

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +   M+        Y Y+ LI GL K G+ E+A  L+K M+  G  P+ V  + L++ L
Sbjct: 289 DLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNIL 348

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY-N 471
            +VG+ +E   +  EM    C     +Y++++K  FES      V  W D  K + V  +
Sbjct: 349 GKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPS 408

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA----------- 520
           E  YS+LI G C+  ++ +A ++  +M  +G  P   AY S+I+ L  A           
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFK 468

Query: 521 ------------------------GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
                                   G + EA+ LFNEM      S PDV+ YN L++ + K
Sbjct: 469 ELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMK--NQGSGPDVYAYNALMSGMVK 526

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              ++ +  LL  M + GC  D+ + NI L   
Sbjct: 527 AGMVNEANSLLRKMEENGCTADINSHNIILNGF 559



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/308 (28%), Positives = 147/308 (47%), Gaps = 22/308 (7%)

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           V   + S L+  L +      A+ ++ Q   + CKP +  Y+++I  L + G+ ++  E+
Sbjct: 160 VGPVVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEV 219

Query: 425 LFEMINNG-CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY-NEVCYSVLIHGL 482
             EM N G C  +  TYS+L+  + + G+   A+ ++ +M K+NC+   E  Y+ L+   
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM-KDNCMQPTEKIYTTLLGIY 278

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            + GK+ +A  ++ +M   GC P V  Y+ +I GL  AG VEEA  L+  ML       P
Sbjct: 279 FKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVEEAYDLYKNMLT--DGLTP 336

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP------ 596
           DV   N L+N L K   +    ++ N M    C P +V+ N  + AL E  +AP      
Sbjct: 337 DVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVSYNTVIKALFES-KAPVSEVSS 395

Query: 597 ------QDG---TDFLNELAIRLF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                  DG   ++F   + I  + K  R      ++E M +K   P  + +  ++  L 
Sbjct: 396 WFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALG 455

Query: 647 RPKRIQAA 654
           + KR +AA
Sbjct: 456 KAKRYEAA 463


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 254/523 (48%), Gaps = 10/523 (1%)

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFI 124
           +D+ FN   ++G  +    TF +LI  Y   G+      VL+ +     V  +   +  +
Sbjct: 291 ADDYFNMVVRIGP-KPNVVTFSTLIDAYCKEGNLDK-AFVLFDVMAGNGVTPDLIVYSIL 348

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
                KA  +E+  RL    +D+   K  V  F+S ++  ++ G   R ++ Y  ++N  
Sbjct: 349 IDGLFKAGRLEDGQRLLLVALDK-GIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNE- 406

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              I PN ++ +++IK  C+ G +  A  LF ++     EP I TY  L+ G CK   L 
Sbjct: 407 --GISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLR 464

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +   L ++M    C P  + ++VLINGLCK G +G A +       +G  PN  T NTL+
Sbjct: 465 DGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLL 524

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
              C    +  A+ +   M       + VTY  +I G  + GR  +   +   M ++ F 
Sbjct: 525 DSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFK 584

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y TLI GL K  K+   + ++  M +    P+  +Y+ LI+   R G  + A  +
Sbjct: 585 PDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGL 644

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
              ++  G   + FT+++++  +    +   AV+++  M       N + +++LI   C 
Sbjct: 645 FVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCR 704

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV-EEALKLFNEMLCLEPKSQPD 543
           +G++ +A +++++ML  G +P++V YS +IHG   + S+ E  LKL+NEML  E    P+
Sbjct: 705 EGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEML--ENNIAPN 762

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           + +Y+IL++ LCK+  +  +       +D+   PD++   I +
Sbjct: 763 IVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILI 805



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 150/582 (25%), Positives = 256/582 (43%), Gaps = 67/582 (11%)

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
           MR +   V E    F+   +     VE  +R FH  + +      + + N +L  I  + 
Sbjct: 232 MREQPFSVYE----FVMNRFMNKGEVEMGLR-FHKALVQGGFGLDIITCNKILKGIWMQN 286

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
               A +++N +V    +   PN +TF+ +I   C+ G +D A  LF  M      PD+ 
Sbjct: 287 DIGVADDYFNMVV---RIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLI 343

Query: 229 TYCTLMDGLCKENRLDEAVLLL-----------------------------------DEM 253
            Y  L+DGL K  RL++   LL                                     M
Sbjct: 344 VYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRM 403

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
             +G  P  V+ ++LI G C+NG +  A  L   +   G  P+ +TY+ LI G C  GNL
Sbjct: 404 LNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNL 463

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
                L + M+  +C P+ + Y  +INGL K G   D  R       R    N +  +TL
Sbjct: 464 RDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTL 523

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           +    +      AMK++  M     K +TV Y+ LI G  + G+ DEA  + F+M+    
Sbjct: 524 LDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDF 583

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
             +  TY +L+ G  +  K    + I+  M KN    +   Y+VLI+    +G L  A  
Sbjct: 584 KPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALG 643

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  ++ RG KPDV  +++MI   CN   +++A++LF +M     + +P+  T+ IL++A
Sbjct: 644 LFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKM--TSEQLRPNAITFTILIDA 701

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
            C++  +  ++ + + M++ G +P+LVT +  +                        FK 
Sbjct: 702 FCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHG---------------------YFKS 740

Query: 614 QR-TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           Q     G K+   ML+  ++P   ++  ++  LC+   ++ A
Sbjct: 741 QSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEA 782



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 152/619 (24%), Positives = 265/619 (42%), Gaps = 101/619 (16%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV-------------- 181
            AIR F      F    +  SF ++L+V++Q  L+ RA   ++  +              
Sbjct: 96  SAIRFFEWAESFFISPLSAPSFCALLHVLLQNQLFSRAACVFDKFIMQFGNDYDTLDAFR 155

Query: 182 -NAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN--CEPDIYTYC--TLMDG 236
                ++   +++ +  +I++ CR G+ D ++ +F  + V+     P++      +L+D 
Sbjct: 156 DGFCDLDSTNHSVVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDS 215

Query: 237 LCKENRLDEAVLLLDEMQ------------------------------VDGCFPTPV-TF 265
            C E  +D+   L   M+                              V G F   + T 
Sbjct: 216 HCVEVIVDKYGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITC 275

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
           N ++ G+    ++G A    + +   G  PN VT++TLI   C +GNLDKA  L D M  
Sbjct: 276 NKILKGIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAG 335

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
           +   P+ + Y  +I+GL K GR  DG R+L+   ++   ++   +S+ +    K G    
Sbjct: 336 NGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGR 395

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
            ++++K+M+ +G  PN V  S LI G C+ G+  EA  +  +++  G   +  TYS+L+ 
Sbjct: 396 VIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIA 455

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           GF +SG       +++DM K  C  + + YSVLI+GLC+ G + +A   + Q ++RG  P
Sbjct: 456 GFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSP 515

Query: 506 -----------------------------------DVVAYSSMIHGLCNAGSVEEALKLF 530
                                              D V Y+ +I G    G V+EAL LF
Sbjct: 516 NVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLF 575

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT--A 588
            +M  L+   +PDV TY  L++ LCK    S  + + + M      PD+   N+ +   +
Sbjct: 576 FQM--LKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHS 633

Query: 589 LKEKLEA------------PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
            +  LEA            P+      N +       +R     ++   M  + L P   
Sbjct: 634 REGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAI 693

Query: 637 TWERVVQELCRPKRIQAAI 655
           T+  ++   CR  R+  A+
Sbjct: 694 TFTILIDAFCREGRMDDAM 712



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 147/584 (25%), Positives = 250/584 (42%), Gaps = 97/584 (16%)

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH----------------RALE----FYNH 179
           L H +V  FH ++  K  N +L   +Q  LYH                R  E    F+  
Sbjct: 53  LIHQIVKAFHNQQNPKPLNPILLSKLQ--LYHVPDVIISLQPKPFSAIRFFEWAESFFIS 110

Query: 180 IVNAKHMNILPNTLTFNLVI--------KTVCRLGLVDNAIQLFREMPVRNCEPD----I 227
            ++A     L + L  N +         K + + G   + +  FR+     C+ D     
Sbjct: 111 PLSAPSFCALLHVLLQNQLFSRAACVFDKFIMQFGNDYDTLDAFRD---GFCDLDSTNHS 167

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC----------KNGE 277
             Y  L++  C++   D++V +   + V G F +P    +L+  L           K GE
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGE 227

Query: 278 LGRAAK--------LVDNMFLK-----------------GCLPNEVTYNTLIHGLCLKGN 312
           L  A +         V N F+                  G   + +T N ++ G+ ++ +
Sbjct: 228 LCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQND 287

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYS 371
           +  A    + +V     PN VT+ T+I+   K G  +D A VL   M       +  +YS
Sbjct: 288 IGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGN-LDKAFVLFDVMAGNGVTPDLIVYS 346

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI GLFK G+ ED  +L    ++KG K + V +S+ +D   ++G      +I   M+N 
Sbjct: 347 ILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNE 406

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G + N  + S L+KGF ++G+  +A  ++  + K     + + YS LI G C+ G LR+ 
Sbjct: 407 GISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDG 466

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++  M+ + C+PD + YS +I+GLC  G V +AL+ F +   +     P+VFT N LL
Sbjct: 467 FYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQ--AVNRGLSPNVFTLNTLL 524

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           ++ C+   I  ++ +   M       D VT  I +        A Q G   ++E  +  F
Sbjct: 525 DSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKG------AAQFGR--VDEALMLFF 576

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +             ML+K   P   T+  ++  LC+ K+  A +
Sbjct: 577 Q-------------MLKKDFKPDVITYCTLIDGLCKLKKSSAGL 607



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 120/243 (49%), Gaps = 8/243 (3%)

Query: 147 EFHCKRTVKSFNSVLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           +F CK  V    ++ NV+I    +EG    AL  + H+V        P+  TFN +I   
Sbjct: 611 DFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPK---PDVFTFNTMICCY 667

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C    +D+A+QLF +M      P+  T+  L+D  C+E R+D+A+L+  +M  +G  P  
Sbjct: 668 CNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNL 727

Query: 263 VTFNVLINGLCKNGELGRAA-KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
           VT++ LI+G  K+  +  +  KL + M      PN V+Y+ LI GLC +G + +A     
Sbjct: 728 VTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFR 787

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
             +    +P+ + Y  +I G  K+GR  +   +  +M   +   + ++  TL     K+ 
Sbjct: 788 CALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTLEEYQLKKA 847

Query: 382 KAE 384
            A+
Sbjct: 848 GAK 850


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 205/406 (50%), Gaps = 10/406 (2%)

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N ++  + R G  +   +L  +M   + +P++ T+  L++ +CK  R+D+A+ +L++M  
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368

Query: 256 D--------GCFPTPVTFNVLINGLCKNGELGRAAKLVDNM-FLKGCLPNEVTYNTLIHG 306
                       P  V +N LI+GLCK G       L++ M   KGC P+ +TYN LI G
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDG 428

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C  G ++K   L D M      PN VT  T++ G+ + GR        +  + R    +
Sbjct: 429 FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGD 488

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+ LI+        E AM+L+ +M++ GC P+ +VY  LI G  + G+  +A  +L 
Sbjct: 489 AVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLA 548

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E+   G   +   Y++L+ GF  + K H+  E+ K+M +     + + Y+ LI    ++G
Sbjct: 549 ELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNG 608

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
            L+ A+ V  +M+  G  P V  Y ++I+  C  G+  EA+++F +M     K  P+   
Sbjct: 609 DLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKA-ASKVPPNTVI 667

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           YNIL+N+LCK + +  ++ L+  M   G  P+  T N     L+++
Sbjct: 668 YNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDE 713



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 209/438 (47%), Gaps = 50/438 (11%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           NS+L  + +EG ++R  E    +V    M+I PN +TF ++I  +C+   VD+A+++  +
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMV---EMDIQPNVVTFGILINHMCKFRRVDDALEVLEK 365

Query: 218 MP--------------------------------------------VRNCEPDIYTYCTL 233
           M                                              + C PD  TY  L
Sbjct: 366 MSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCL 425

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +DG CK   +++   L DEM  +G  P  VT N L+ G+C+ G +  A         +G 
Sbjct: 426 IDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGM 485

Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
             + VTY  LI+  C   N +KA+ L + M+ S C P+ + Y T+I+G  + GR  D + 
Sbjct: 486 KGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASF 545

Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           VL  +++     +   Y+TLI G  +  K     ++ K+M E G KP+T+ Y+ LI    
Sbjct: 546 VLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYAS 605

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM-AKNNCVYNE 472
           + G    A++++ +MI  G      TY +++  +  +G G++A+EI+KDM A +    N 
Sbjct: 606 KNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNT 665

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y++LI+ LC++ K++ A  +   M   G  P+   Y+++  GL +   +E+  +  + 
Sbjct: 666 VIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDR 725

Query: 533 MLCLEPKSQPDVFTYNIL 550
           M  +E    PD  T  IL
Sbjct: 726 M--IEHACNPDYITMEIL 741



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 132/467 (28%), Positives = 217/467 (46%), Gaps = 27/467 (5%)

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           RL+ T   E +   TV + + +L    +  L   +L  +N +  +     + NT   N+ 
Sbjct: 143 RLYKT-SKELNIPLTVNAASFLLRASGRSELVEESLILFNDLDPS-----VKNTYLRNVW 196

Query: 199 IKTVCRLGLVDNAIQLFREM----PVRNCEPDIYTYCTLMDGLCKENR------LDEAVL 248
           +  + R G V +A+++  EM       NC P+  T   L   L K  R       DE V 
Sbjct: 197 LSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVN 256

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           L+ +    G   +      LI  LC+N +  R   L   M   G +      N+L+ GL 
Sbjct: 257 LVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLA 316

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK------ 362
            +GN ++   L+++MV     PN VT+G +IN + K  R  D   VL  M   K      
Sbjct: 317 REGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGIS 376

Query: 363 --FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPD 419
                +  IY+TLI GL K G+ ++ + L ++M  +KGC P+T+ Y+ LIDG C+ G+ +
Sbjct: 377 VSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIE 436

Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
           + +E+  EM   G A N  T ++L+ G   +G+   AV  + +  +     + V Y+ LI
Sbjct: 437 KGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALI 496

Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
           +  C      +A  ++ +ML  GC PD + Y ++I G   AG + +A  +  E+  L  +
Sbjct: 497 NAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIR 556

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
             PD   YN L+   C+ +      ++L  M + G  PD +T N  +
Sbjct: 557 --PDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLI 601



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/350 (25%), Positives = 149/350 (42%), Gaps = 41/350 (11%)

Query: 105 VLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNV 163
           ++ RMR +K    +  ++  +   + KA  +E+   LF  M  E      V + N+++  
Sbjct: 405 LMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVV-TVNTLVGG 463

Query: 164 IIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
           + + G    A+ F+   V A+   +  + +T+  +I   C +   + A++LF EM    C
Sbjct: 464 MCRTGRVSSAVNFF---VEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGC 520

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC---------- 273
            PD   Y TL+ G  +  R+ +A  +L E++  G  P  V +N LI G C          
Sbjct: 521 SPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFE 580

Query: 274 -------------------------KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
                                    KNG+L  A K++  M   G +P   TY  +I+  C
Sbjct: 581 MLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYC 640

Query: 309 LKGNLDKAVSLLDRM-VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           L GN ++A+ +   M  ASK  PN V Y  +IN L K  +      ++  M+      N 
Sbjct: 641 LNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNT 700

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
             Y+ +  GL  E   E   +   +M+E  C P+ +    L + L  VG+
Sbjct: 701 TTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGE 750



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/308 (22%), Positives = 132/308 (42%), Gaps = 38/308 (12%)

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG----CKPNTVVYSALIDGLCRVGK---- 417
           N Y+ +  +S L + G+ +DA+K+  +M E      C+PN      L   L +  +    
Sbjct: 189 NTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEEL 248

Query: 418 --PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
              DE   ++ +   +G   ++F    L+     + K ++  +++ +M K   V      
Sbjct: 249 LSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAAC 308

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + L+ GL  +G       +  +M+    +P+VV +  +I+ +C    V++AL++  +M  
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSG 368

Query: 536 ------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD-RGCDPDLVTCNIFLTA 588
                 +    +PDV  YN L++ LCK       + L+  M   +GC PD +T N  +  
Sbjct: 369 GKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLI-- 426

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                    DG            K      G ++ + M ++ ++P   T   +V  +CR 
Sbjct: 427 ---------DG----------FCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRT 467

Query: 649 KRIQAAIN 656
            R+ +A+N
Sbjct: 468 GRVSSAVN 475



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 14/253 (5%)

Query: 68  EIFNSTPKLGSYQLGDS-TFYSLIQHYANSGDFKSLEMVLYRMRR---EKRVVLEKSFIF 123
           E+FN   K G     D+  +Y+LI  ++ +G       VL  +++       V   + I 
Sbjct: 510 ELFNEMLKSGCSP--DAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIG 567

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
            F    K H V E ++     ++E   K    ++N+++    + G    A +    ++ A
Sbjct: 568 GFCRTNKFHRVFEMLK----EMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKA 623

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENR 242
               ++P   T+  VI   C  G  + A+++F++M       P+   Y  L++ LCK N+
Sbjct: 624 ---GVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNK 680

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           +  AV L+++M++ G  P   T+N +  GL    +L +  + +D M    C P+ +T   
Sbjct: 681 VKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEI 740

Query: 303 LIHGLCLKGNLDK 315
           L   L   G +++
Sbjct: 741 LTEWLSAVGEIER 753



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 7/141 (4%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           TV ++ +V+N     G  + A+E +  +  A    + PNT+ +N++I ++C+   V +A+
Sbjct: 628 TVATYGAVINAYCLNGNGNEAMEIFKDMKAASK--VPPNTVIYNILINSLCKNNKVKSAV 685

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L  +M +    P+  TY  +  GL  E  L++    +D M    C P  +T  +L   L
Sbjct: 686 SLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWL 745

Query: 273 CKNGELGRAAKLVDNMFLKGC 293
              GE+ R  K     F+ GC
Sbjct: 746 SAVGEIERLKK-----FVAGC 761


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 179/330 (54%), Gaps = 2/330 (0%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P    FNVL+  L + GEL  A  + D M  +G     V++NT+I G+C  G+LD A
Sbjct: 235 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 294

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
            +L  RM  +   P+  TYG +I GL ++GR  D   V   M  R    N  +++ LI  
Sbjct: 295 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 354

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K+G AE  ++L ++M E+G +P+ V Y+A+++GLCR      A  I+ EM + G   +
Sbjct: 355 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 414

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY++L+ G+ +  +   A+EI ++M       +EV Y+ LI GL + G+  +A  V  
Sbjct: 415 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 474

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M+  G +PD   Y+ +I   C  G V+  L+L  EM       +P V TYN+++N  CK
Sbjct: 475 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQ--NKGRKPGVVTYNVIMNGFCK 532

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
              + ++  LLN+M++ G  PD +T NI L
Sbjct: 533 LGQMKNADMLLNAMINIGVSPDDITYNILL 562



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 189/385 (49%), Gaps = 8/385 (2%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A  FY  +++A    + P    FN++++ + RLG + +A  +F EM  R     + ++ T
Sbjct: 224 ACAFYLQLLDA---GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 280

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           ++ G+C+   LD A  L   M   G  P   T+  LI GLC+ G +  A  + + M  +G
Sbjct: 281 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 340

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN V +  LI   C KG+ +  + L   M      P+ VTY  I+NGL +       +
Sbjct: 341 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 400

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +++ M       +   Y+TLI G  KE + + AM++ + M+ +G   + V Y+ALI GL
Sbjct: 401 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 460

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            + G+  +AE +L EM+  G   +  TY+ ++  F   G     + + K+M         
Sbjct: 461 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 520

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+V+++G C+ G+++ A M+   M++ G  PD + Y+ ++ G C  G V +      E
Sbjct: 521 VTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDI-----E 575

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQ 557
            L     + PD+  Y  ++  + K+
Sbjct: 576 ELKSAKGTVPDLGVYTSIVGEIVKK 600



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 16/287 (5%)

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           A +A   + Q+++ G  P   +++ L+  L R+G+   A+ +  EM + G      ++++
Sbjct: 221 APEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 280

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G   +G    A  + + M++     +   Y  LI GLC  G++ +AR V+ +M  RG
Sbjct: 281 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 340

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            KP+ V ++ +I   C  G  E  L+L  EM   E   +PD  TYN ++N LC+  ++  
Sbjct: 341 MKPNAVVFTILIDAHCKKGDAETMLELHREM--RERGVRPDAVTYNAIVNGLCRARDLKS 398

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDFLNELAI-- 608
           +  ++  M   G  PD VT    +              +K+ + A   G D +   A+  
Sbjct: 399 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 458

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            L K  R++   +++  M++  L P  +T+  V+   CR   ++  +
Sbjct: 459 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGL 505


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/503 (27%), Positives = 237/503 (47%), Gaps = 8/503 (1%)

Query: 89  LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           +++  A   D +++   + ++R E  +V   + +  F   G+       ++   T    F
Sbjct: 211 VLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGF 270

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
                  +FN V++ + +EG    A++    +V++  ++   ++ T+N +I  +   G V
Sbjct: 271 SLNDV--TFNVVISFLAREGHLENAVK----LVDSMRLSKKASSFTYNPLITALLERGFV 324

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
             A  L  EM      P + TY  ++ GL K  + + A +   EM+  G  P  +T+N L
Sbjct: 325 RKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSL 384

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           +N  CK G L  A  L+ ++   G  P  +TYNTLI G C  G+L +A  L + MV   C
Sbjct: 385 LNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGC 444

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+  TY  ++NG  K+            M  +    + + Y+T I           A +
Sbjct: 445 FPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQ 504

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           L + MM KG  P+TV Y+ +IDGLC+ G   +A+ +  +M+++G   +  TY+ L+    
Sbjct: 505 LREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHC 564

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           E G   +A ++   M  +    + V Y++L+H  C  G L  A   + +ML  G +P+ +
Sbjct: 565 ERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEI 624

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+ +IH LC  G    A + F+EM  LE    P+ +TY +L++  C++ N + +I L  
Sbjct: 625 TYNVLIHALCMTGRTPLAFRHFHEM--LERGLAPNKYTYTLLIDGNCREGNWADAIRLYF 682

Query: 569 SMMDRGCDPDLVTCNIFLTALKE 591
            M   G  PD  T N       E
Sbjct: 683 EMHQNGIPPDYCTHNALFKGFDE 705



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 155/506 (30%), Positives = 233/506 (46%), Gaps = 61/506 (12%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            + P+    N V++ +      D+   ++ EM     EP I TY TL+D   KE R DEA
Sbjct: 197 GVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEA 256

Query: 247 VLLLDEMQVDGCFPT--PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            +LL EM+  G   +   VTFNV+I+ L + G L  A KLVD+M L     +  TYN LI
Sbjct: 257 SMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPLI 315

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
             L  +G + KA +L   M     MP  VTY  II+GL+K  +A         M      
Sbjct: 316 TALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLL 375

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y++L++   K G  ++A+ L   +   G  P  + Y+ LIDG CR+G   EA  +
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 425 LFEMINNGCAANAFTYSSLMKG------------FFES--GKGHK--------------- 455
             EM+  GC  +  TY+ LM G            FF+    KG +               
Sbjct: 436 KEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELT 495

Query: 456 ------AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
                 A ++ + M       + V Y+V+I GLC+ G L++A+ + T+M+S G +PD + 
Sbjct: 496 LSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCIT 555

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ +IH  C  G + EA KL N M  +    QP V TY IL++  C++ N+  +      
Sbjct: 556 YTCLIHAHCERGLLREARKLLNGM--VSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRK 613

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQK 629
           M+D G +P+ +T N+ + AL      P         LA R F              ML++
Sbjct: 614 MLDVGIEPNEITYNVLIHALCMTGRTP---------LAFRHFHE------------MLER 652

Query: 630 FLSPQTSTWERVVQELCRPKRIQAAI 655
            L+P   T+  ++   CR      AI
Sbjct: 653 GLAPNKYTYTLLIDGNCREGNWADAI 678



 Score =  159 bits (401), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 159/345 (46%), Gaps = 39/345 (11%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++NS+LN   + G    AL     +  A    + P  LT+N +I   CRLG +  A +
Sbjct: 378 VITYNSLLNRYCKAGNLKEALWLLGDLRRA---GLAPTVLTYNTLIDGYCRLGDLAEARR 434

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-------------------- 253
           L  EM  + C PD+ TY  LM+G  K   L  A    DEM                    
Sbjct: 435 LKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAEL 494

Query: 254 ---------------QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
                           + G +P  VT+NV+I+GLCK G L  A +L   M   G  P+ +
Sbjct: 495 TLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCI 554

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           TY  LIH  C +G L +A  LL+ MV+    P+ VTY  +++   + G           M
Sbjct: 555 TYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKM 614

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
            +     NE  Y+ LI  L   G+   A + + +M+E+G  PN   Y+ LIDG CR G  
Sbjct: 615 LDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNW 674

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            +A  + FEM  NG   +  T+++L KGF E G  + A+E  +++
Sbjct: 675 ADAIRLYFEMHQNGIPPDYCTHNALFKGFDE-GHMYHAIEYMENI 718



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/328 (30%), Positives = 156/328 (47%), Gaps = 4/328 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  Y  +G+ K    +L  +RR        ++  +   Y +   + EA RL   M
Sbjct: 380 TYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEM 439

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V++  C   V ++  ++N   +      A EF++ +++     + P+   +N  I     
Sbjct: 440 VEQ-GCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSK---GLQPDCFAYNTRICAELT 495

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           L     A QL   M ++   PD  TY  ++DGLCK   L +A  L  +M  DG  P  +T
Sbjct: 496 LSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCIT 555

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+  C+ G L  A KL++ M   G  P+ VTY  L+H  C +GNL  A     +M+
Sbjct: 556 YTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKML 615

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                PNE+TY  +I+ L   GR     R    M ER    N+Y Y+ LI G  +EG   
Sbjct: 616 DVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWA 675

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           DA++L+ +M + G  P+   ++AL  G 
Sbjct: 676 DAIRLYFEMHQNGIPPDYCTHNALFKGF 703


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 246/482 (51%), Gaps = 24/482 (4%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMV------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
            +F+ Y    + EE +R+F  MV      DE  C   + +      + +        LE 
Sbjct: 159 LVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDL-------CLEI 211

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
           +  +V++    +     +  +V++ +CR G V+ + +L +E  V+  +P+ YTY T+++ 
Sbjct: 212 FRRMVDS---GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINA 268

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
             K+        +L  M+ DG     VT+ +L+    KNG++  A KL D M  +G   +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
              Y +LI   C KGN+ +A  L D +      P+  TYG +I+G+ K+G  +  A +LM
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE-MGAAEILM 387

Query: 357 S-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
           + M+ +  ++ + +++TLI G  ++G  ++A  ++  M +KG + +    + +     R+
Sbjct: 388 NEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRL 447

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            + DEA++ LF M+  G   +  +Y++L+  + + G   +A  ++ +M+      N + Y
Sbjct: 448 KRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITY 507

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           +V+I+  C+ GK++EAR +   M + G  PD   Y+S+IHG C A +V+EA++LF+EM  
Sbjct: 508 NVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEM-G 566

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
           L+   Q  V TY ++++ L K      +  L + M  +G   D    N   TAL   + +
Sbjct: 567 LKGLDQNSV-TYTVMISGLSKAGKSDEAFGLYDEMKRKGYTID----NKVYTALIGSMHS 621

Query: 596 PQ 597
           P+
Sbjct: 622 PE 623



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 18/176 (10%)

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++ +M+  G K  V + + ++ GLC  G VE++ KL  E      K  P+ +TYN ++NA
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIK--PEAYTYNTIINA 268

Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF-- 611
             KQ + S    +L  M   G   + VT  + L  L  K     D     +E+  R    
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTL-LMELSVKNGKMSDAEKLFDEMRERGIES 327

Query: 612 -------------KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                        ++      F + + + +K LSP + T+  ++  +C+   + AA
Sbjct: 328 DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAA 383


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/462 (27%), Positives = 228/462 (49%), Gaps = 16/462 (3%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           +A   E+ + +F  +  +  CK    S+  ++  + + G   +A    + I       ++
Sbjct: 12  RARRSEQIVVVFRRIFSQ-DCKPNALSYCYLVKALCRTGKIDKAC---STIAEMAREKLV 67

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+  T+N+VI T+C+   +  AI+ F  MP    EPD+ TY TL+ GLCK  R+ +A  L
Sbjct: 68  PDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSL 123

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
              M+  G  P+ VT+  LI+  CK  +   A  L+  M  + C P   +Y ++I+GLC 
Sbjct: 124 FGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCK 183

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              +D+A  L + M  + C P+ VTY T+I+GL    R  +   +L  M E  F  ++  
Sbjct: 184 NRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKIT 243

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ LI GL    + ++A  L++ M ++GC P+ V ++ L+  LC + K   A      ++
Sbjct: 244 FTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPA----LSVV 299

Query: 430 NN--GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
            N   C      Y+ + +         +A  + + MA+     N V Y+    GL +  +
Sbjct: 300 RNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGDWKE 359

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
              A   + +ML +G +PD+VAY+ ++ G C A  ++ A K+   M   +    P++ TY
Sbjct: 360 GMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMD--QSGLPPNIVTY 417

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           N L+   C++  +    +LL++M+ RG  PD+ T +  +  L
Sbjct: 418 NTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGL 459



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 235/488 (48%), Gaps = 64/488 (13%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           +T N ++  + R    +  + +FR +  ++C+P+  +YC L+  LC+  ++D+A   + E
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M  +   P   T+NV+I+ LCK   + RA +  + M      P+ VTYNTL+ GLC  G 
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           + +A SL   M  +   P++VTY T+I+   K+ +      +L  M  RK     Y Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           +I+GL K  K + A +L+++M   GCKP+ V Y+ LI GLC   +  EA+++L  M+ NG
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR--- 489
              +  T+++L++G   + +  +A  +++ MAK  C  + V ++VL+  LC   KLR   
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296

Query: 490 ----------EARMVWT--------------------QMLSRGCKPDVVAYSSMIHGLCN 519
                     EA +++T                    +M  RG  P+VV Y++   GL +
Sbjct: 297 SVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGLGD 356

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
                 A + F  M  LE   +PD+  YN+L++  CK   +  +  ++  M   G  P++
Sbjct: 357 WKEGMRAYREFRRM--LEQGIEPDMVAYNVLVDGFCKADRLDMAEKMVRYMDQSGLPPNI 414

Query: 580 VTCNIFLT--ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           VT N  +     K K+EA       + EL                +  M+ +   P  +T
Sbjct: 415 VTYNTLVGHHCRKGKVEA-------IGEL----------------LHTMVSRGRQPDVAT 451

Query: 638 WERVVQEL 645
           W  +V  L
Sbjct: 452 WSTLVAGL 459



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 210/447 (46%), Gaps = 10/447 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++  L++    +G        +  M REK V    ++  +     KA  +  AI  F TM
Sbjct: 37  SYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM 96

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            +       V ++N++L  + + G   +A   +  +  A    I P+ +T+  +I   C+
Sbjct: 97  PEP-----DVVTYNTLLGGLCKNGRVAQACSLFGSMEGA---GITPSDVTYTTLIDVFCK 148

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +   + A  L + M  R C P +Y+YC++++GLCK  ++D+A  L +EM++ GC P  VT
Sbjct: 149 MCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVT 208

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+GLC    L  A  L+  M   G  P+++T+  LI GLC    + +A  L   M 
Sbjct: 209 YNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMA 268

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
              C P+ VT+  +++ L  L +      V+ +       V   +Y+ +   L +    +
Sbjct: 269 KQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYPACPEAV--ILYTPIFRELGRRRGFD 326

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A +L ++M  +G  PN V Y+A   GL    +   A      M+  G   +   Y+ L+
Sbjct: 327 RAARLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLV 386

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
            GF ++ +   A ++ + M ++    N V Y+ L+   C  GK+     +   M+SRG +
Sbjct: 387 DGFCKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQ 446

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFN 531
           PDV  +S+++ GL   G  + A    N
Sbjct: 447 PDVATWSTLVAGLFMVGQADAAYSFLN 473



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 31/286 (10%)

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + L+  L +  ++E  + +++++  + CKPN + Y  L+  LCR GK D+A   + EM  
Sbjct: 4   NALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAR 63

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
                + FTY+ ++    ++ +  +A+E ++ M + + V     Y+ L+ GLC++G++ +
Sbjct: 64  EKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPEPDVVT----YNTLLGGLCKNGRVAQ 119

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  ++  M   G  P  V Y+++I   C     E A  L   M     K  P V++Y  +
Sbjct: 120 ACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMA--SRKCSPTVYSYCSI 177

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAI 608
           +N LCK   +  +  L   M   GC PD VT N  +  L  K++L   +D          
Sbjct: 178 INGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKD---------- 227

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                        ++ VM++    P   T+  +++ LC   RI+ A
Sbjct: 228 -------------LLTVMVENGFQPDKITFTALIEGLCTTDRIKEA 260


>gi|302813796|ref|XP_002988583.1| hypothetical protein SELMODRAFT_42378 [Selaginella moellendorffii]
 gi|300143690|gb|EFJ10379.1| hypothetical protein SELMODRAFT_42378 [Selaginella moellendorffii]
          Length = 478

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/471 (31%), Positives = 229/471 (48%), Gaps = 53/471 (11%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+N ++    + G   +AL     +   K  ++ PN  T   ++K  C++G ++ A++ F
Sbjct: 1   SYNLLVRGYCEAGEVCKALRLVKEM---KARDLAPNEATHGEILKGFCQIGRMEEALEHF 57

Query: 216 RE-MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD-GCFPTPVTFNVLINGLC 273
           R  +     +P +Y   TL+DG CK  +L +A  L +EM VD G  P+ VT N L+ GLC
Sbjct: 58  RSVIDTSGVDPAMYN--TLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLC 115

Query: 274 KNGELGRAAKLVDNMFLK----GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           K G   +A KL   M  +      +      N LI GLC  G +D+A+ L+      K M
Sbjct: 116 KAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFERCKDKAM 175

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSME-ERKFHVNEYIYS----------------- 371
            N VTYG +I GL K  R  DG R+L  M   R  + +   Y+                 
Sbjct: 176 INAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALE 235

Query: 372 -------------------TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
                              TL++GL K G++  A++L ++M   GC+P++ VY  +I+ L
Sbjct: 236 FFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEEL 295

Query: 413 CRVGKPDEAEEILFEMINNGCA-ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           C  G+ D+A ++L E +  G A AN  TY+ ++ G +++ +  KA    K +  ++    
Sbjct: 296 CNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAP 355

Query: 472 EVCYS-VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
            V  S  +I GLC+ G+  EAR     M   G K +   Y+S++ GLC A  + EAL  F
Sbjct: 356 SVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFF 415

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +EM   + +  P V TYNILL+  CK   I  +  +  +M+D  C P  VT
Sbjct: 416 HEM---QDEGLPSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVT 463



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 198/408 (48%), Gaps = 18/408 (4%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV----LL 249
           ++NL+++  C  G V  A++L +EM  R+  P+  T+  ++ G C+  R++EA+     +
Sbjct: 1   SYNLLVRGYCEAGEVCKALRLVKEMKARDLAPNEATHGEILKGFCQIGRMEEALEHFRSV 60

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLC 308
           +D   VD     P  +N LI+G CK  +L  A  L + M +  G +P+ VT NTL+ GLC
Sbjct: 61  IDTSGVD-----PAMYNTLIDGFCKVAKLSDAFNLAEEMIVDLGWMPSAVTCNTLVAGLC 115

Query: 309 LKGNLDKAVSLLDRMVA----SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
             G+ DKAV L  RM      +  M        +I+GL + GR  +   ++    + K  
Sbjct: 116 KAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFERCKDKAM 175

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQM-MEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
           +N   Y  LI GL K  + ED ++L ++M   +G  P+   Y++++ G C +   ++A E
Sbjct: 176 INAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALE 235

Query: 424 ILFEMI-NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
               +   N CA +     +L+ G  +SG+  +A+E+ ++M +  C  +   Y ++I  L
Sbjct: 236 FFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEEL 295

Query: 483 CEDGKLREARMVWTQMLSRGCKP-DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           C  G+  +A  +  + L +G  P +   Y+ ++ GL      E+A +    +L     S 
Sbjct: 296 CNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILS-SSLSA 354

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           P V T   +++ LCK    S +   L SM   G   +    N  L  L
Sbjct: 355 PSVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGL 402



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 222/477 (46%), Gaps = 50/477 (10%)

Query: 89  LIQHYANSGDF-KSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           L++ Y  +G+  K+L +V   M+       E +   I K + +   +EEA+  F +++D 
Sbjct: 5   LVRGYCEAGEVCKALRLV-KEMKARDLAPNEATHGEILKGFCQIGRMEEALEHFRSVIDT 63

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
                 +  +N++++   +      A      ++    +  +P+ +T N ++  +C+ G 
Sbjct: 64  SGVDPAM--YNTLIDGFCKVAKLSDAFNLAEEMI--VDLGWMPSAVTCNTLVAGLCKAGS 119

Query: 208 VDNAIQLFREMPVR----NCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
            D A++LF  M  R    +    +     L+DGLC+  R+DEA+ L+ E   D      V
Sbjct: 120 FDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALELVFERCKDKAMINAV 179

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFL-KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           T+ +LI GLCK+  +    +L++ M   +G  P+  TYN+++ G C    +++A+     
Sbjct: 180 TYGILIQGLCKSKRVEDGLRLLEEMSTSRGLNPDAATYNSIVAGFCELDMVEQALEFFSN 239

Query: 323 MV-ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
           +   +KC P+ V  GT++NGL K GR++    +L  M+      +  +Y  +I  L   G
Sbjct: 240 VTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMDRVGCQPSSQVYCLMIEELCNSG 299

Query: 382 KAEDAMKLWKQMMEKGCKP-NTVVYS---------------------------------- 406
           +A+ A KL  + + KG  P NT  Y+                                  
Sbjct: 300 EADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAPSVVT 359

Query: 407 --ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
             A+IDGLC+ G+  EA   L  M   G  AN   Y+SL+ G  ++ K  +A+  + +M 
Sbjct: 360 SCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFFHEM- 418

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           ++  + + V Y++L+ G C+  K+ EA  V+  M+   C P  V Y ++  G   +G
Sbjct: 419 QDEGLPSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRSG 475



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 185/380 (48%), Gaps = 21/380 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRM----RREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           T  +L+     +G F     +  RM    +R   +V   +   +     +A  V+EA+ L
Sbjct: 106 TCNTLVAGLCKAGSFDKAVKLFTRMAERTKRNSTMVTLAAANALIDGLCRAGRVDEALEL 165

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGL-----YHRALEFYNHIVNAKHMNILPNTLTF 195
                    CK      N+V   I+ +GL         L     +  ++ +N  P+  T+
Sbjct: 166 VFE-----RCKDKAM-INAVTYGILIQGLCKSKRVEDGLRLLEEMSTSRGLN--PDAATY 217

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           N ++   C L +V+ A++ F  +   N C PD     TL++GLCK  R  +A+ LL+EM 
Sbjct: 218 NSIVAGFCELDMVEQALEFFSNVTQGNKCAPDPVMIGTLVNGLCKSGRSLQALELLEEMD 277

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP-NEVTYNTLIHGLCLKGNL 313
             GC P+   + ++I  LC +GE  +A KL+     KG  P N  TY  ++ GL      
Sbjct: 278 RVGCQPSSQVYCLMIEELCNSGEADKACKLLHETLRKGRAPANTGTYTMIVDGLYKTHRP 337

Query: 314 DKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +KA   L  +++S    P+ VT   II+GL K GR  +    L+SM +     N +IY++
Sbjct: 338 EKARRHLKGILSSSLSAPSVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNS 397

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ GL K  K  +A+  + +M ++G  P+ V Y+ L+DG C+V K +EA  +   M++  
Sbjct: 398 LLGGLCKAAKMGEALAFFHEMQDEGL-PSVVTYNILLDGFCKVVKIEEACAVFVAMVDAK 456

Query: 433 CAANAFTYSSLMKGFFESGK 452
           C   A TY +L +GF  SGK
Sbjct: 457 CLPTAVTYKTLTEGFTRSGK 476



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 86/183 (46%), Gaps = 9/183 (4%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLY--HRALEFYNHIVNAKHMNI-LP 190
            ++A +L H  +     ++     N+    +I +GLY  HR  +   H+      ++  P
Sbjct: 301 ADKACKLLHETL-----RKGRAPANTGTYTMIVDGLYKTHRPEKARRHLKGILSSSLSAP 355

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + +T   +I  +C+ G    A      M     + + + Y +L+ GLCK  ++ EA+   
Sbjct: 356 SVVTSCAIIDGLCKSGRFSEARWFLLSMGQMGSKANTHIYNSLLGGLCKAAKMGEALAFF 415

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EMQ +G  P+ VT+N+L++G CK  ++  A  +   M    CLP  VTY TL  G    
Sbjct: 416 HEMQDEG-LPSVVTYNILLDGFCKVVKIEEACAVFVAMVDAKCLPTAVTYKTLTEGFTRS 474

Query: 311 GNL 313
           G +
Sbjct: 475 GKM 477



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 96/213 (45%), Gaps = 6/213 (2%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDF-KSLEMVLYRMRREKRVVLEKSFIFIFK 126
           E+     ++G  Q     +  +I+   NSG+  K+ +++   +R+ +      ++  I  
Sbjct: 271 ELLEEMDRVGC-QPSSQVYCLMIEELCNSGEADKACKLLHETLRKGRAPANTGTYTMIVD 329

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
              K H  E+A R    ++       +V +  ++++ + + G +  A  F   +++   M
Sbjct: 330 GLYKTHRPEKARRHLKGILSSSLSAPSVVTSCAIIDGLCKSGRFSEARWF---LLSMGQM 386

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
               NT  +N ++  +C+   +  A+  F EM      P + TY  L+DG CK  +++EA
Sbjct: 387 GSKANTHIYNSLLGGLCKAAKMGEALAFFHEMQDEGL-PSVVTYNILLDGFCKVVKIEEA 445

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
             +   M    C PT VT+  L  G  ++G++ 
Sbjct: 446 CAVFVAMVDAKCLPTAVTYKTLTEGFTRSGKMA 478


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/388 (30%), Positives = 201/388 (51%), Gaps = 5/388 (1%)

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +A+  F  M +    P  + +  ++  L K  R    + L  + + +G  P   T ++LI
Sbjct: 41  HAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 100

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           N  C    +  A  +  N+  +G  P+ +T NTLI GLC +G + K +   D++VA    
Sbjct: 101 NCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQ 160

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
            ++V+YGT+INGL K G     AR+L  +E      +  +Y+T+I+ L K     DA  +
Sbjct: 161 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDV 220

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + +M+ KG  P+ V Y+ LI G C +GK  EA  +L EM       + +T+S L+    +
Sbjct: 221 YSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGK 280

Query: 450 SGKGH---KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
            GK     +A+ ++++M   N + + V Y+ LI GLC++  L  A  +  +M   G +PD
Sbjct: 281 EGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPD 340

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           V +Y+ ++ GLC  G +E A + F  +L        +V+ YN+++N LCK      ++DL
Sbjct: 341 VYSYTILLDGLCKGGRLEIAKEFFQHLLV--KGCHLNVWPYNVMINGLCKAGLFGEAMDL 398

Query: 567 LNSMMDRGCDPDLVTCNIFLTALKEKLE 594
            + M  +GC P+ +T    + AL EK E
Sbjct: 399 KSKMEGKGCMPNAITFRTIICALSEKDE 426



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 199/412 (48%), Gaps = 11/412 (2%)

Query: 171 HRALEFYNHIVNAKHMNIL----PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPD 226
           H    +++H V + ++ +L    P T  FN ++ ++ +       I LF++       PD
Sbjct: 33  HSQPHYHHHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPD 92

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
           + T   L++  C +  +  A  +   +   G  P  +T N LI GLC  GE+ +     D
Sbjct: 93  LCTLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHD 152

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            +  +G   ++V+Y TLI+GLC  G       LL ++      P+ V Y TIIN L K  
Sbjct: 153 QVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNK 212

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
              D   V   M  +    +   Y+TLI G    GK ++A  L  +M  K   P+   +S
Sbjct: 213 LLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFS 272

Query: 407 ALIDGLCRVGKP---DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            LID L + GK    DEA  +  EM +     +  TY+SL+ G  ++    +A+ + K+M
Sbjct: 273 VLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEM 332

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
            ++    +   Y++L+ GLC+ G+L  A+  +  +L +GC  +V  Y+ MI+GLC AG  
Sbjct: 333 KEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLF 392

Query: 524 EEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            EA+ L ++M   E K   P+  T+  ++ AL ++     +  +L  M+ RG
Sbjct: 393 GEAMDLKSKM---EGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARG 441



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 156/312 (50%), Gaps = 18/312 (5%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRR---E 112
           +G  K    F D++         +QL   ++ +LI     +G+ K++  +L ++     +
Sbjct: 141 RGEIKKTLYFHDQVVAQ-----GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVK 195

Query: 113 KRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHR 172
             VV+  + I    +  K  L+ +A  ++  M+ +      V ++ ++++     G    
Sbjct: 196 PDVVMYNTII---NSLCKNKLLGDACDVYSEMIVK-GISPDVVTYTTLIHGFCIMGKMKE 251

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLG---LVDNAIQLFREMPVRNCEPDIYT 229
           A    N +   K  NI P+  TF+++I  + + G   +VD A+ LF EM  +N  PDI T
Sbjct: 252 AFSLLNEM---KLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVT 308

Query: 230 YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           Y +L+DGLCK + L+ A+ LL EM+  G  P   ++ +L++GLCK G L  A +   ++ 
Sbjct: 309 YNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLL 368

Query: 290 LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAV 349
           +KGC  N   YN +I+GLC  G   +A+ L  +M    CMPN +T+ TII  L +     
Sbjct: 369 VKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDEND 428

Query: 350 DGARVLMSMEER 361
              ++L  M  R
Sbjct: 429 KAEKILREMIAR 440



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 104/213 (48%), Gaps = 7/213 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGK---AHLVEEAIRLF 141
           T+ +LI  +   G  K    +L  M+ +       +F  +  A GK     +V+EA+ LF
Sbjct: 235 TYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLF 294

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M  +      V ++NS+++ + +     RA+     +   K   I P+  ++ +++  
Sbjct: 295 EEMKHKNMIPDIV-TYNSLIDGLCKNHHLERAIALLKEM---KEHGIQPDVYSYTILLDG 350

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+ G ++ A + F+ + V+ C  +++ Y  +++GLCK     EA+ L  +M+  GC P 
Sbjct: 351 LCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPN 410

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            +TF  +I  L +  E  +A K++  M  +G L
Sbjct: 411 AITFRTIICALSEKDENDKAEKILREMIARGLL 443


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 179/347 (51%), Gaps = 16/347 (4%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           N + N +      + +C +G  D A QL +EM  +   PD  TY  ++  LC   ++++A
Sbjct: 417 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 476

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
            LL  EM++ G  P   T+ +LI+  CK G + +A  L + M   GC P  VTY  LIH 
Sbjct: 477 FLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHA 536

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-------- 358
                 + +A  +  RMV + C PN+VTYG +++GL K G       V   +        
Sbjct: 537 YLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSAD 596

Query: 359 -------EERK-FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
                  E+R     N   Y  L+ GL K  K + A +L   M+  GC+PN +VY ALID
Sbjct: 597 SDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALID 656

Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
           G C+ GK D A+E+  +M   G   +  TY+SL+   F+ G+   A+++   M K++C  
Sbjct: 657 GFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTP 716

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           N V Y+ +I GLC  G+  +A  + + M  +GC P+VV Y+++I GL
Sbjct: 717 NVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 139/568 (24%), Positives = 257/568 (45%), Gaps = 77/568 (13%)

Query: 160 VLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +LNV+++     G+++ ALE    +   K     P+ +T+N +++ +   G VD   ++ 
Sbjct: 176 LLNVLVRRCCRGGMWNEALEELGRL---KDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQ 232

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENR--------------------------------L 243
           +EM       D +T       LCKE R                                 
Sbjct: 233 KEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYF 292

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           DEA+  L  M+ + C P  VT+  L++G  K  +LG   ++++ M  +GC PN   +N+L
Sbjct: 293 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +H  C + +   A  LL+RM    C P  V Y   I  +   G+    +  L+ + E+ +
Sbjct: 353 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSIC--GQEKLPSPDLLDLAEKIY 410

Query: 364 H--------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
                    +N+   +     L   GK + A +L K+MM KG  P+T  YS +I  LC  
Sbjct: 411 GEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHA 470

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
            K ++A  +  EM   G   + +TY+ L+  F ++G   +A  ++++M    C    V Y
Sbjct: 471 TKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTY 530

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           + LIH   +  ++ +A  ++ +M+  GC+P+ V Y +++ GLC AG++ +A +++ +++ 
Sbjct: 531 TALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 590

Query: 536 LEPKSQ--------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
               +               P+V TY  L++ LCK   + H+ +LL++M+  GC+P+ + 
Sbjct: 591 TSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIV 650

Query: 582 CNIFLTAL--KEKLEAPQD------------GTDFLNELAIRLFKRQRTSGGFKIVEVML 627
            +  +       K+++ Q+                   L  R+FK  R     K++  ML
Sbjct: 651 YDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 710

Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +   +P   T+  ++  LCR    + A+
Sbjct: 711 KDSCTPNVVTYTAMIDGLCRIGESEKAL 738



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 157/283 (55%), Gaps = 16/283 (5%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K + + P+  T+ ++I + C+ GL++ A  LF EM    C P + TY  L+    K  ++
Sbjct: 484 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 543

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA----AKLV------DNMFLKGC 293
            +A  +   M   GC P  VT+  L++GLCK G + +A    AKL+      D+ F   C
Sbjct: 544 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 603

Query: 294 ------LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                  PN VTY  L+ GLC    +D A  LLD M++S C PN + Y  +I+G  K G+
Sbjct: 604 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 663

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                 V + M +  +  + + Y++LI  +FK+G+ + AMK+  QM++  C PN V Y+A
Sbjct: 664 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 723

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           +IDGLCR+G+ ++A ++L  M   GC+ N  TY++L+ G  +S
Sbjct: 724 MIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQS 766



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 199/476 (41%), Gaps = 90/476 (18%)

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
           D A+     M   +C P++ TY TL+ G  K+ +L     +++ M  +GC P P  FN L
Sbjct: 293 DEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSL 352

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK------------------ 310
           ++  C   +   A KL++ M   GC P  V YN  I  +C +                  
Sbjct: 353 VHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGE 412

Query: 311 -----------------------GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
                                  G  DKA  L+  M+    +P+  TY  +I  L    +
Sbjct: 413 MLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATK 472

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                 +   M+      + Y Y+ LI    K G  E A  L+++M   GC P  V Y+A
Sbjct: 473 VEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTA 532

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW------K 461
           LI    +  +  +A +I   M++ GC  N  TY +L+ G  ++G   KA E++       
Sbjct: 533 LIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTS 592

Query: 462 DMAKNNCVY----------NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           D A ++  +          N V Y  L+ GLC+  K+  A  +   MLS GC+P+ + Y 
Sbjct: 593 DSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYD 652

Query: 512 SMIHGLCNAGSVEEALKLFNEM--------------------------LCLEPKSQ---- 541
           ++I G C AG ++ A ++F +M                          L ++  SQ    
Sbjct: 653 ALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKD 712

Query: 542 ---PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
              P+V TY  +++ LC+      ++ LL+ M ++GC P++VT    +  L +  +
Sbjct: 713 SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQSWQ 768



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/342 (23%), Positives = 154/342 (45%), Gaps = 27/342 (7%)

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y  + + L   GRA D  R+L  + E    V   + + L+    + G   +A++   ++ 
Sbjct: 142 YDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLK 201

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           + G +P+ V Y+AL+  L   G+ D    +  EM  +G   + FT         + G+  
Sbjct: 202 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 261

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A+++   + + +   + V  + +I GL E     EA     +M    C P+VV Y +++
Sbjct: 262 DALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 318

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G      +    ++ N M+       P +F  N L+++ C + + +++  LLN M   G
Sbjct: 319 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLF--NSLVHSYCNEKDYAYAYKLLNRMTTCG 376

Query: 575 CDPDLVTCNIFLTAL--KEKLEAPQDGTDF--------------LNELAIRLFKR----- 613
           C P  V  NIF+ ++  +EKL +P D  D               LN++ +  F R     
Sbjct: 377 CPPGYVVYNIFIGSICGQEKLPSP-DLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGV 435

Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            +    F++++ M++K   P TST+ +V+  LC   +++ A 
Sbjct: 436 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAF 477


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 235/470 (50%), Gaps = 30/470 (6%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           +   FN ++  + R+  V    +++  M    +  PD+ TY  L++GLCK  R+ +A+ +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 250 LDEM--QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF--LKGCLPNEVTYNTLIH 305
           LD M  Q     P  VT N +++GLCK+G +  A   V+     + GC PN VTYN LI 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF-- 363
             C  GN+  A  L+++M       N VT  TI+ GL + GR   GA +    E+R    
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRT--GAALEFFREKRTVWP 312

Query: 364 --HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               N   YSTL+  L        AM+L+ + M +G  P+ ++Y  +I GL + G+ ++A
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIH 480
             +   M   G   +   Y+ L+ GF    + H+A E+ ++M K   +  +VC Y+ L+ 
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM-KEVGIRPDVCTYNTLLS 431

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C+ G       +  +M+  GC+P V+ + +++HG C  G ++EAL++   M   E   
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMD--ESGI 489

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P+   YN L++ LCK+ ++  +I+L + M ++    ++ T N  L  L++K   P+   
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDK-NMPEKAF 548

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
           + ++++     + +R    +  V+V+++         W  V+ E  R KR
Sbjct: 549 ELMDQM-----REERCFPDYVTVDVLME---------WLPVIGETDRLKR 584



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 217/429 (50%), Gaps = 47/429 (10%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMDGLCKENRLD 244
           ++ P+ +T+ +++  +C+ G V +A+++   M  ++ +  PD+ T  T++DGLCK  R+ 
Sbjct: 167 SVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQ 226

Query: 245 EAVLLLDEM--QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           EA+  +++    V GC P  VT+N LI+  C+ G +  A +LV+ M  +G   N VT NT
Sbjct: 227 EALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNT 286

Query: 303 LIHGLCLKG-------------------------------------NLDKAVSLLDRMVA 325
           ++ GLC  G                                     N+  A+ L    ++
Sbjct: 287 IVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMS 346

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               P+ + Y T+I+GL + GR  D   +  SM+E  F ++   Y+ LI+G  ++ +  +
Sbjct: 347 EGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE 406

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A +L ++M E G +P+   Y+ L+ G C+ G     +E+L +MI++GC  +  T+ +L+ 
Sbjct: 407 AYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVH 466

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G+ + GK  +A+ I + M ++    N V Y+ LI  LC+ G +  A  ++ +M  +    
Sbjct: 467 GYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           +V  +++++ GL +    E+A +L ++M   E +  PD  T ++L+  L     +    D
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDQM--REERCFPDYVTVDVLMEWL----PVIGETD 580

Query: 566 LLNSMMDRG 574
            L   M +G
Sbjct: 581 RLKRFMQQG 589



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 189/406 (46%), Gaps = 9/406 (2%)

Query: 130 KAHLVEEAIRLFHTMV-DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           KA  V +A+R+   M   +   +  V + N+V++ + + G    AL F    +++ H   
Sbjct: 184 KAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVH-GC 242

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PNT+T+N +I   CR+G +  A +L  +M       +I T  T++ GLC+  R   A+ 
Sbjct: 243 PPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALE 302

Query: 249 LLDEMQVDGCFP----TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
              E +    +P      VT++ L+  L     +G A +L      +G  P+ + Y T+I
Sbjct: 303 FFREKRT--VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMI 360

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GL   G L+ A S+   M  +    +   Y  +I G  +  R  +   +L  M+E    
Sbjct: 361 SGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIR 420

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y+TL+SG  K G      +L  +M++ GC+P+ + +  L+ G C+VGK DEA  I
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRI 480

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L  M  +G   N   Y++L+    + G    A+E++ +M + +   N   ++ L+ GL +
Sbjct: 481 LRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
                +A  +  QM    C PD V    ++  L   G  +  LK F
Sbjct: 541 KNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR-LKRF 585



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 161/326 (49%), Gaps = 10/326 (3%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A+ +   +  A  L   M +E    + + + N+++  + + G    ALEF+      
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENE-GVPQNIVTLNTIVGGLCRAGRTGAALEFFR----- 305

Query: 184 KHMNILP----NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   + P    N +T++ ++  +     V  A++LF E       PD   Y T++ GL +
Sbjct: 306 EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQ 365

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             RL++A  +   M+  G       +N+LI G C+   L  A +L+  M   G  P+  T
Sbjct: 366 AGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCT 425

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTL+ G C  G+      LL +M+   C P+ +T+GT+++G  K+G+  +  R+L SM+
Sbjct: 426 YNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMD 485

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E   H N  IY+TLI  L K G  + A++L+ +M EK    N   ++AL+ GL     P+
Sbjct: 486 ESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPE 545

Query: 420 EAEEILFEMINNGCAANAFTYSSLMK 445
           +A E++ +M    C  +  T   LM+
Sbjct: 546 KAFELMDQMREERCFPDYVTVDVLME 571



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 26/168 (15%)

Query: 493 MVWTQMLSRGC---KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           M     L +GC   +PDVV Y  +++GLC AG V +AL++ + M   +   +PDV T N 
Sbjct: 155 MARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNT 214

Query: 550 LLNALCKQSNISHSIDLLNSMMD--RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           +++ LCK   +  ++  +   M    GC P+ VT N  + A                   
Sbjct: 215 VVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAF------------------ 256

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
               +    S  +++VE M  + +     T   +V  LCR  R  AA+
Sbjct: 257 ---CRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301


>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
 gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
          Length = 571

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 135/452 (29%), Positives = 224/452 (49%), Gaps = 5/452 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSL-EMVLYRMRREKRVVLEKSFIFIFK 126
           + F    K  +Y+   ST+ +LI        +  + +M+   +R    VV       + +
Sbjct: 108 QFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVR 167

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
             G A +V +AI +F+  +    C+ T +++NS++ +++ EG Y +  E YN +    H 
Sbjct: 168 MLGNAKMVSKAIAIFYQ-IKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGH- 225

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
              P+T+T++ +I   C+LG  D+AIQL  EM     +P    Y  L+    K N +  A
Sbjct: 226 -CFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGA 284

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L +EM+   C P   T+  LI GL K G +  A      M  +GC P+ +  N +I+ 
Sbjct: 285 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINF 344

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL-GRAVDGARVLMSMEERKFHV 365
           L   G LD A+ L   M   +C+P+ VTY TII  L +   RA +       M+E     
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           + + YS LI G  K  + E AM L ++M EKG  P    Y +LID L +  + D A E+ 
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+  N  ++++  Y+ ++K   ++G+   A+ ++ +M K  C  +   Y+ L+ GL   
Sbjct: 465 QELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLART 524

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           G L EA     +M   GC PD+ +Y+ +++GL
Sbjct: 525 GMLDEALSTMRRMQEHGCIPDINSYNIILNGL 556



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 131/517 (25%), Positives = 232/517 (44%), Gaps = 56/517 (10%)

Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           VL++ FI I K +      E+A+ +    VD +  +  +K+   V NV +Q         
Sbjct: 59  VLDERFIRILKIFKWGPDAEKALEVLMLRVDHWLVREIMKTDIGV-NVKMQ--------- 108

Query: 176 FYNHIVNAKHMNILPNTLTFNLVI---KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           F+     AK  N   +T T+  +I   + V + G +   IQ     P+    P   +   
Sbjct: 109 FFRWA--AKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVV 166

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
            M G  K   + +A+ +  +++   C PT   +N +I  L   G+  +  +L + M  +G
Sbjct: 167 RMLGNAK--MVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEG 224

Query: 293 -CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
            C P+ +TY+ LI   C  G  D A+ LL+ M  +   P    Y  ++    KL      
Sbjct: 225 HCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGA 284

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +   M  +    + + Y+ LI GL K G+ ++A   + +M  +GC+P+T+V + +I+ 
Sbjct: 285 LSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINF 344

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY- 470
           L + G+ D+A ++  EM    C  +  TY++++K  FES      V  W +  K + +  
Sbjct: 345 LGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISP 404

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS------------------ 512
           +   YS+LI G C+  ++ +A M+  +M  +G  P   AY S                  
Sbjct: 405 SSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELF 464

Query: 513 -----------------MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
                            MI  L  AG +++A+ +F+EM  L     PDV+ YN L++ L 
Sbjct: 465 QELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKL--GCAPDVYAYNALMSGLA 522

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +   +  ++  +  M + GC PD+ + NI L  L+++
Sbjct: 523 RTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQ 559



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 127/264 (48%), Gaps = 11/264 (4%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE----KRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
           T+  LI+    +G         Y M+RE      +V+     F+    GKA  +++A++L
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFL----GKAGRLDDAMKL 357

Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           F  M     C  +V ++N+++  + +     RA E  +     K   I P++ T++++I 
Sbjct: 358 FQEM-GTLRCIPSVVTYNTIIKALFESK--SRASEVPSWFERMKESGISPSSFTYSILID 414

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
             C+   ++ A+ L  EM  +   P    YC+L+D L K  R D A  L  E++ +    
Sbjct: 415 GFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 474

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
           +   + V+I  L K G L  A  + D M   GC P+   YN L+ GL   G LD+A+S +
Sbjct: 475 SSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTM 534

Query: 321 DRMVASKCMPNEVTYGTIINGLVK 344
            RM    C+P+  +Y  I+NGL K
Sbjct: 535 RRMQEHGCIPDINSYNIILNGLQK 558



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 124/271 (45%), Gaps = 23/271 (8%)

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG-CAANAFTYSSLM 444
           A+ ++ Q+  + C+P    Y+++I  L   G+ ++  E+  EM   G C  +  TYS+L+
Sbjct: 178 AIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALI 237

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
             F + G+   A+++  +M  N        Y++L+    +   +  A  ++ +M  + C+
Sbjct: 238 SAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCR 297

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           PDV  Y+ +I GL  AG ++EA   F EM       +PD    N ++N L K   +  ++
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFFYEMQ--REGCRPDTIVMNNMINFLGKAGRLDDAM 355

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
            L   M    C P +VT N  + AL E      +   +        F+R + SG      
Sbjct: 356 KLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSW--------FERMKESG------ 401

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                 +SP + T+  ++   C+  R++ A+
Sbjct: 402 ------ISPSSFTYSILIDGFCKTNRMEKAM 426


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/532 (28%), Positives = 245/532 (46%), Gaps = 42/532 (7%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK---RTVKSFNSVLNVIIQEGLYHRALEF 176
           +F  +   + +A +V+EA      +VD   C    R V+S+N  L+ +++ G+   A E 
Sbjct: 288 TFDVMLSGFCEAGMVDEA----RVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQEL 343

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
              +    H  + PN+ T+N+++  +C+ G   +  ++   +      PD+ TY +L+  
Sbjct: 344 LREMA---HEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHA 400

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C E     A  +LDEM   GC P   T+NVL+  L K G +  A +L++ M  KG   +
Sbjct: 401 YCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLD 460

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRM-----------------------VASKCMPNEV 333
             + N +I GLC    LD A+ ++D M                        + +C+P+ +
Sbjct: 461 TASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRI 520

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T+++ L K GR  +  + L+ M  +    +  +Y T I G  K GK   A+K+ + M
Sbjct: 521 TYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDM 580

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            +KGCKP+T  Y+ LI G       DE  +++ EM   G   N  TY+SL+K F E G  
Sbjct: 581 EKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMV 640

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
           +KA+ +  +M +N  V N   + +LI   C+      A+ V+   LS  C    V YS M
Sbjct: 641 NKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLST-CGQKEVLYSLM 699

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
              L   G   EA+ +   +L  E +     F Y  ++  LCK   + H   LL  +M +
Sbjct: 700 CTQLSTYGRWLEAMNILETVL--ELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVK 757

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQR----TSGGFK 621
           G   D       + AL E+    +   D L++  + + +R       SG FK
Sbjct: 758 GYSFDPAAFMPVIDALSER--GKKQHVDMLSQKMMEMAERDNGLAAPSGEFK 807



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/505 (26%), Positives = 235/505 (46%), Gaps = 47/505 (9%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  +F ++ +  CR G   +A+ +   MP  N    +    T++ G C+E ++DEA  L+
Sbjct: 180 NEFSFGILARGYCRAGRSMDALGVLDSMPTMN----LVVCNTVVAGFCREGQVDEAERLV 235

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM---FLKGC-LPNEVTYNTLIHG 306
           + M+ +G  P  VTFN  I+ LCK G +  A ++ ++M   + +G   P++VT++ ++ G
Sbjct: 236 ERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSG 295

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C  G +D+A  L+D M     +    +Y   ++GLV+ G   +   +L  M       N
Sbjct: 296 FCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPN 355

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            Y Y+ ++ GL KEGKA D  K+   +      P+ V Y++L+   C  G    A  IL 
Sbjct: 356 SYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILD 415

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM   GCA N+FTY+ L++  +++G+  +A  + + M++     +    +++I GLC + 
Sbjct: 416 EMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNN 475

Query: 487 KLREARMVWTQMLSRG-----------------------CKPDVVAYSSMIHGLCNAGSV 523
           KL  A  +   M + G                       C PD + YS+++  LC  G  
Sbjct: 476 KLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRF 535

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           +EA K   EM+  +    PD   Y+  ++  CK    S ++ +L  M  +GC P   T N
Sbjct: 536 DEAKKKLLEMIGKD--ISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYN 593

Query: 584 IFLTALKEK--------LEAPQDGTDF------LNELAIRLFKRQRTSGGFKIVEVMLQK 629
           + +   +EK        L +   G          N L     +R   +    +++ MLQ 
Sbjct: 594 LLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQN 653

Query: 630 FLSPQTSTWERVVQELCRPKRIQAA 654
            + P  +++E +++  C+     AA
Sbjct: 654 EIVPNITSFELLIKAFCKTSDFSAA 678



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 151/561 (26%), Positives = 259/561 (46%), Gaps = 61/561 (10%)

Query: 118 EKSFIFIFKAYGKAHLVEEAIRLFHTM--VDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
           E SF  + + Y +A    +A+ +  +M  ++   C   V  F     V   E L  R   
Sbjct: 181 EFSFGILARGYCRAGRSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERM-- 238

Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN----CEPDIYTYC 231
                   +   + PN +TFN  I  +C+ G V +A ++F +M  +       PD  T+ 
Sbjct: 239 --------RDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFD 290

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            ++ G C+   +DEA +L+D M+  G      ++N  ++GL +NG +G A +L+  M  +
Sbjct: 291 VMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHE 350

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  PN  TYN ++ GLC +G       + D + +    P+ VTY ++++     G A   
Sbjct: 351 GVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAA 410

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            R+L  M ++    N + Y+ L+  L+K G+  +A +L ++M EKG   +T   + +IDG
Sbjct: 411 NRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDG 470

Query: 412 LCRVGKPDEAEEILFEMINNG-----------------------CAANAFTYSSLMKGFF 448
           LCR  K D A +I+  M N G                       C  +  TYS+L+    
Sbjct: 471 LCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALC 530

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           + G+  +A +   +M   +   + V Y   IHG C+ GK   A  V   M  +GCKP   
Sbjct: 531 KEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTR 590

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
            Y+ +I G     + +E LKL +EM    +C      P+V TYN L+ + C++  ++ ++
Sbjct: 591 TYNLLIWGFREKHNSDEILKLISEMKGKGIC------PNVMTYNSLIKSFCERGMVNKAM 644

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVE 624
            LL+ M+     P++ +  + + A  +        +DF    A R+F    ++ G K V 
Sbjct: 645 PLLDEMLQNEIVPNITSFELLIKAFCKT-------SDF--SAAQRVFDASLSTCGQKEV- 694

Query: 625 VMLQKFLSPQTSTWERVVQEL 645
             L   +  Q ST+ R ++ +
Sbjct: 695 --LYSLMCTQLSTYGRWLEAM 713



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/391 (24%), Positives = 181/391 (46%), Gaps = 28/391 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  Y + G+  +   +L  M ++       ++  + ++  KA  + EA RL   M
Sbjct: 393 TYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERM 452

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI---------------- 188
            ++ +   T  S N +++ + +      A++  + + N   + +                
Sbjct: 453 SEKGYSLDTA-SCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSS 511

Query: 189 ----LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
               LP+ +T++ ++  +C+ G  D A +   EM  ++  PD   Y T + G CK  +  
Sbjct: 512 SKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTS 571

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
            AV +L +M+  GC P+  T+N+LI G  +        KL+  M  KG  PN +TYN+LI
Sbjct: 572 LAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLI 631

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL---MSMEER 361
              C +G ++KA+ LLD M+ ++ +PN  ++  +I    K        RV    +S   +
Sbjct: 632 KSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQ 691

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
           K    E +YS + + L   G+  +AM + + ++E     +   Y  +I+GLC+V + D  
Sbjct: 692 K----EVLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHG 747

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGK 452
             +L  ++  G + +   +  ++    E GK
Sbjct: 748 HRLLKLLMVKGYSFDPAAFMPVIDALSERGK 778


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 179/330 (54%), Gaps = 2/330 (0%)

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G  P    FNVL+  L + GEL  A  + D M  +G     V++NT+I G+C  G+LD A
Sbjct: 111 GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAGDLDGA 170

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
            +L  RM  +   P+  TYG +I GL ++GR  D   V   M  R    N  +++ LI  
Sbjct: 171 ETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDA 230

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K+G AE  ++L ++M E+G +P+ V Y+A+++GLCR      A  I+ EM + G   +
Sbjct: 231 HCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPD 290

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY++L+ G+ +  +   A+EI ++M       +EV Y+ LI GL + G+  +A  V  
Sbjct: 291 TVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLG 350

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M+  G +PD   Y+ +I   C  G V+  L+L  EM       +P V TYN+++N  CK
Sbjct: 351 EMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQ--NKGRKPGVVTYNVIMNGFCK 408

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
              + ++  LLN+M++ G  PD +T NI L
Sbjct: 409 LGQMKNADMLLNAMINIGVSPDDITYNILL 438



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 189/385 (49%), Gaps = 8/385 (2%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A  FY  +++A    + P    FN++++ + RLG + +A  +F EM  R     + ++ T
Sbjct: 100 ACAFYLQLLDA---GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 156

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           ++ G+C+   LD A  L   M   G  P   T+  LI GLC+ G +  A  + + M  +G
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 216

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN V +  LI   C KG+ +  + L   M      P+ VTY  I+NGL +       +
Sbjct: 217 MKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSAS 276

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            +++ M       +   Y+TLI G  KE + + AM++ + M+ +G   + V Y+ALI GL
Sbjct: 277 GIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGL 336

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            + G+  +AE +L EM+  G   +  TY+ ++  F   G     + + K+M         
Sbjct: 337 SKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGV 396

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
           V Y+V+++G C+ G+++ A M+   M++ G  PD + Y+ ++ G C  G V +      E
Sbjct: 397 VTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDI-----E 451

Query: 533 MLCLEPKSQPDVFTYNILLNALCKQ 557
            L     + PD+  Y  ++  + K+
Sbjct: 452 ELKSAKGTVPDLGVYTSIVGEIVKK 476



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 135/287 (47%), Gaps = 16/287 (5%)

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
           A +A   + Q+++ G  P   +++ L+  L R+G+   A+ +  EM + G      ++++
Sbjct: 97  APEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNT 156

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G   +G    A  + + M++     +   Y  LI GLC  G++ +AR V+ +M  RG
Sbjct: 157 MISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRG 216

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
            KP+ V ++ +I   C  G  E  L+L  EM   E   +PD  TYN ++N LC+  ++  
Sbjct: 217 MKPNAVVFTILIDAHCKKGDAETMLELHREM--RERGVRPDAVTYNAIVNGLCRARDLKS 274

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDFLNELAI-- 608
           +  ++  M   G  PD VT    +              +K+ + A   G D +   A+  
Sbjct: 275 ASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALIS 334

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            L K  R++   +++  M++  L P  +T+  V+   CR   ++  +
Sbjct: 335 GLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGL 381


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/465 (29%), Positives = 218/465 (46%), Gaps = 7/465 (1%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           I  A+ ++ L E+A+   + M+       +  +FN++L ++I+   + +A   +N     
Sbjct: 88  IINAHVRSQLPEQALFYXNQMIGRGLVPGS-NTFNNLLILLIKSNFFEKAWRVFNETKG- 145

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
              N+  +  +F ++IK  C +G +D   ++  +M      P++  Y TL+DG CK   +
Sbjct: 146 ---NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDI 202

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           +    L  +M          T+ VLING  K G      +L + M L G +PN  TYN++
Sbjct: 203 ERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSM 262

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I   C  G L+ A  L D M       N VTY T+I GL +  R ++  R++  M+    
Sbjct: 263 ICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGL 322

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   Y+TLI G    G  + A  L+ QM   G  P+   Y+ LI G           +
Sbjct: 323 SPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTD 382

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++ EM   G + +  TY+ LM     S    KA +I+  M K   V +   Y VLIHGLC
Sbjct: 383 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 442

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
             G ++EA  ++  +     KP+ V Y++MI+G C  GS   AL+L  EM   E    P+
Sbjct: 443 VVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEM--GENGMVPN 500

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           V +YN  +  LCK    + +  LL  M++ G  P +   N+   A
Sbjct: 501 VASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 545



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 180/366 (49%), Gaps = 4/366 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
            + +LI     +GD +  + + Y+M     V  + ++  +   + K  L ++ I L+  M
Sbjct: 188 VYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKM 247

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                    V ++NS++     +G  + A E ++ +   +   +  N +T+N +I  +C+
Sbjct: 248 -KLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEM---RERGVACNVVTYNTLIGGLCQ 303

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
              V  A +L   M      P++ +Y TL+DG C    LD+A  L ++M+  G  P+  T
Sbjct: 304 ERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLAT 363

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N+LI G  +         +V  M  +G  P++VTY  L+  L    N++KA  +   M 
Sbjct: 364 YNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSME 423

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +  + +   YG +I+GL  +G   + +++  S++E     N+ IY+T+I G  KEG + 
Sbjct: 424 KAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSY 483

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
            A++L K+M E G  PN   Y++ I  LC+  K  EAE +L +MI  G   +   ++ + 
Sbjct: 484 RALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMIS 543

Query: 445 KGFFES 450
           K  F++
Sbjct: 544 KARFDN 549



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 156/343 (45%), Gaps = 28/343 (8%)

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS-- 371
           ++A+   ++M+    +P   T+  ++  L+K        RV     E K +V   +YS  
Sbjct: 99  EQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF---NETKGNVKLDVYSFG 155

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +I G  + G  +   ++  QM E G  PN VVY+ LIDG C+ G  +  +++ ++M   
Sbjct: 156 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 215

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
              AN +TY+ L+ GFF+ G     +E+++ M     V N   Y+ +I   C DGKL  A
Sbjct: 216 DVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNA 275

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++ +M  RG   +VV Y+++I GLC    V EA +L   M        P++ +YN L+
Sbjct: 276 FELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMK--RDGLSPNLISYNTLI 333

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
           +  C   N+  +  L N M   G  P L T NI +    E                    
Sbjct: 334 DGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEA------------------- 374

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             + ++G   +V  M  + LSP   T+  ++  L R   I+ A
Sbjct: 375 --KNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKA 415


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/427 (30%), Positives = 224/427 (52%), Gaps = 15/427 (3%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T  +FN+++N I   G    AL F++H++    +    + +++  +I  +C++G    A+
Sbjct: 128 TTITFNTLINGICLNGKLKEALHFHDHVIA---LGFHLDQVSYRTLINGLCKIGETRAAL 184

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           Q+ +++  +    D+  Y  +++ LCK+  + +A  L  EM      P  VTFN LI G 
Sbjct: 185 QMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGF 244

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           C  G+L  A  L   M LK   P+  T++ L+  LC  GN+ +A ++L  M+    +P+ 
Sbjct: 245 CVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDV 304

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           VTY ++++G   +        V  +M       + + Y+ +I+GL K    ++A+ L+K+
Sbjct: 305 VTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKE 364

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M  KG  P+TV Y++LIDGLC++G+   A +++ EM NNG  A+  TY+SL+    ++  
Sbjct: 365 MCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHH 424

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
             KA+ + K +       +   Y++LI GLC+ G+L+ A+ V+  +L +G   +   Y+ 
Sbjct: 425 IDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNI 484

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQ-----PDVFTYNILLNALCKQSNISHSIDLL 567
           MI+GLC  G       LFNE   L  K +     PD  TY  ++ AL ++     +  LL
Sbjct: 485 MINGLCKEG-------LFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLL 537

Query: 568 NSMMDRG 574
             M+ RG
Sbjct: 538 REMIIRG 544



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 137/526 (26%), Positives = 249/526 (47%), Gaps = 35/526 (6%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM----NIL 189
           V   +  FH M+       ++  FN +L  I++    H     Y   ++  H      I 
Sbjct: 38  VNNDVSSFHRML-RMRPTPSIVEFNKILGSIVKANNNH-----YTTAISLSHQLELKGIT 91

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +TFN+++   C LG +  A  +F ++      P   T+ TL++G+C   +L EA+  
Sbjct: 92  PTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHF 151

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D +   G     V++  LINGLCK GE   A +++  +  K    + V YN +I+ LC 
Sbjct: 152 HDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCK 211

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              +  A  L   M+  +  P+ VT+ ++I G   +G+  +   +   M  +  + + Y 
Sbjct: 212 DKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYT 271

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S L+  L K+G    A  +   MM++G  P+ V YS+L+DG C V + ++A+ +   M 
Sbjct: 272 FSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMS 331

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G A +A +Y+ ++ G  +     +A+ ++K+M       + V Y+ LI GLC+ G++ 
Sbjct: 332 RLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRIS 391

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            A  +  +M + G   D++ Y+S+I  LC    +++A+ L  ++   +   QP ++TYNI
Sbjct: 392 YAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKI--KDQGIQPSMYTYNI 449

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQDGTDFLNELAI 608
           L++ LCK   + ++ D+   ++ +G   +  T NI +  L KE L          NE  +
Sbjct: 450 LIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGL---------FNEAEV 500

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            L K +                + P   T+E +++ L R    + A
Sbjct: 501 LLSKMENNG-------------IIPDAVTYETIIRALFRKDENEKA 533



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 186/379 (49%), Gaps = 21/379 (5%)

Query: 295 PNEVTYNTLIHGLCLKGN---LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           P   ++   +H    K N   ++  VS   RM+  +  P+ V +  I+  +VK       
Sbjct: 17  PFRASFCHYLHPFIPKSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYT 76

Query: 352 ARVLMS--MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
             + +S  +E +        ++ L++     G+   A  ++ ++++ G  P T+ ++ LI
Sbjct: 77  TAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLI 136

Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
           +G+C  GK  EA      +I  G   +  +Y +L+ G  + G+   A+++ K +      
Sbjct: 137 NGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVN 196

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
            + V Y+++I+ LC+D  + +A  ++++M+++   PDVV ++S+I G C  G ++EA  L
Sbjct: 197 TDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGL 256

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA- 588
           F+EM+       PDV+T++IL++ALCK  NI+ + ++L  MM +G  PD+VT +  +   
Sbjct: 257 FHEMVL--KNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGY 314

Query: 589 -LKEKLEAPQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVMLQKFLSPQT 635
            L  ++   +     ++ L +             L K +       + + M  K ++P T
Sbjct: 315 CLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDT 374

Query: 636 STWERVVQELCRPKRIQAA 654
            T+  ++  LC+  RI  A
Sbjct: 375 VTYNSLIDGLCKLGRISYA 393



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 110/244 (45%), Gaps = 37/244 (15%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  Y    +    + V   M R        S+  +    GK  +V+EA+ LF  M
Sbjct: 306 TYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEM 365

Query: 145 -------------------------------VDEFH---CKRTVKSFNSVLNVIIQEGLY 170
                                          VDE H       + ++NS+++V+ +    
Sbjct: 366 CCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHI 425

Query: 171 HRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
            +A+     I   K   I P+  T+N++I  +C+ G + NA  +F+++ ++    + +TY
Sbjct: 426 DKAIALVKKI---KDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTY 482

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
             +++GLCKE   +EA +LL +M+ +G  P  VT+  +I  L +  E  +A KL+  M +
Sbjct: 483 NIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMII 542

Query: 291 KGCL 294
           +G L
Sbjct: 543 RGLL 546


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 160/575 (27%), Positives = 270/575 (46%), Gaps = 22/575 (3%)

Query: 83  DSTFYSL-IQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D+  YS+ IQ +  + D +    +L  MR +  V  E +F  +  A  K   + EA+RL 
Sbjct: 278 DAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLK 337

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             MV        V +   V     Q+ L   ALEF++ +         PN +T+ ++I+ 
Sbjct: 338 DEMVSCGVQMNVVVATTLVKGYCKQDKLVS-ALEFFDKM---NENGPSPNRVTYAVLIEW 393

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
            C+ G +  A  L+ +M  +N  P ++   +L+ G  K    +EA  L DE  V      
Sbjct: 394 CCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE-AVACDIAN 452

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             T+N L++ LCK G++  A  L   M  KG  P +V+YN++I G C +GNLD A S+  
Sbjct: 453 IFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFS 512

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M+     PN +TY  +++G  K G       V   M +     +++ Y+  I+GL K G
Sbjct: 513 DMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVG 572

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           +  +A  + K+ +EKG  P  + Y++++DG  + G    A     EM  +G + N  TY+
Sbjct: 573 RTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYT 632

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +L+ GF ++     A+++  +M       +   Y  LI G C+   +  A  +++++L  
Sbjct: 633 TLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDG 692

Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
           G  P+ V Y+S+I G  N  ++E AL L   ML        D+ TY  L++ L K+  + 
Sbjct: 693 GLSPNSVIYNSLISGYRNLNNMEAALNLQKRML--GEGISCDLQTYTTLIDGLLKEGRLV 750

Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQD------------GTDFLNELA 607
            ++DL + M  +G  PD++   + +  L  K +LE  Q                  N L 
Sbjct: 751 LALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALI 810

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
              FK       F++   ML K L+P  +T++ ++
Sbjct: 811 AGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/437 (28%), Positives = 225/437 (51%), Gaps = 9/437 (2%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCK-RTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
           + + + K    EEA +LF   V    C    + ++NS+L+ + +EG    A   +  +++
Sbjct: 425 LIRGFLKVESREEASKLFDEAV---ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLD 481

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
                + P  +++N +I   CR G +D A  +F +M     +P++ TY  LMDG  K   
Sbjct: 482 K---GLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGD 538

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
            + A  + D M  +   P+  T+N+ INGLCK G    A  ++     KG +P  +TYN+
Sbjct: 539 TEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNS 598

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           ++ G   +G++  A++    M  S   PN +TY T+ING  K        ++   M  + 
Sbjct: 599 IMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKG 658

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
             ++   Y  LI G  K+   E A  L+ ++++ G  PN+V+Y++LI G   +   + A 
Sbjct: 659 LELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAAL 718

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
            +   M+  G + +  TY++L+ G  + G+   A++++ +M+    + + + Y+VLI+GL
Sbjct: 719 NLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGL 778

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
           C  G+L  A+ +  +M      P+V  Y+++I G   AG+++EA +L NEM  L+    P
Sbjct: 779 CGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEM--LDKGLTP 836

Query: 543 DVFTYNILLNALCKQSN 559
           +  TY+IL+N   K  N
Sbjct: 837 NDTTYDILINGKIKGGN 853



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 237/523 (45%), Gaps = 24/523 (4%)

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
           F     ++ +N +LN  I+    + A+  +N +V +   +I+P     N ++  + +  +
Sbjct: 168 FDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVES---DIVPWIKFLNFLLTALVKNDM 224

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           +  A +++ +M ++    D +T   +M    K+N  +EA     E +  G       +++
Sbjct: 225 IYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSI 284

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK-GNLDKAVSLLDRMVAS 326
           +I   CKN ++  A  L+ +M  KG +P+E T+ ++I G C+K GN+ +A+ L D MV+ 
Sbjct: 285 VIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVI-GACVKQGNMVEALRLKDEMVSC 343

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
               N V   T++ G  K  + V        M E     N   Y+ LI    K G    A
Sbjct: 344 GVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKA 403

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC-AANAFTYSSLMK 445
             L+ QM  K   P   + ++LI G  +V   +EA ++  E +   C  AN FTY+SL+ 
Sbjct: 404 YDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAV--ACDIANIFTYNSLLS 461

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
              + GK  +A  +W+ M        +V Y+ +I G C  G L  A  V++ ML  G KP
Sbjct: 462 WLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKP 521

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           +V+ YS ++ G    G  E A  +F+ M  ++    P  FTYNI +N LCK    S + D
Sbjct: 522 NVITYSILMDGYFKNGDTEYAFYVFDRM--VDENIVPSDFTYNIKINGLCKVGRTSEAQD 579

Query: 566 LLNSMMDRGCDPDLVTCNIF-------------LTALKEKLEAPQDGTDFLNELAIRLF- 611
           +L   +++G  P  +T N               LTA +E  E+            I  F 
Sbjct: 580 MLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFC 639

Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           K   T    K+   M  K L    + +  ++   C+ + I+ A
Sbjct: 640 KNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETA 682



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 158/383 (41%), Gaps = 56/383 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG--KAHLVEEAIRLFH 142
           T+  L+  Y  +GD +    V  RM  E   ++   F +  K  G  K     EA  +  
Sbjct: 525 TYSILMDGYFKNGDTEYAFYVFDRMVDEN--IVPSDFTYNIKINGLCKVGRTSEAQDMLK 582

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
             V++      + ++NS+++  I+EG    AL  Y  +  +    + PN +T+  +I   
Sbjct: 583 KFVEKGFVPVCL-TYNSIMDGFIKEGSVSSALTAYREMCES---GVSPNVITYTTLINGF 638

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           C+    D A+++  EM  +  E DI  Y  L+DG CK+  ++ A  L  E+   G  P  
Sbjct: 639 CKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNS 698

Query: 263 VTFN-----------------------------------VLINGLCKNGELGRAAKLVDN 287
           V +N                                    LI+GL K G L  A  L   
Sbjct: 699 VIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSE 758

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  KG +P+ + Y  LI+GLC KG L+ A  +L  M      PN   Y  +I G  K G 
Sbjct: 759 MSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGN 818

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +  R+   M ++    N+  Y  LI+G  K G +  A+K    +  K  K        
Sbjct: 819 LQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGGNS--ALKSLLSLKFKDGK-------- 868

Query: 408 LIDGLCRVGKPDEAEEILFEMIN 430
              G+ R+ + D  ++++ + +N
Sbjct: 869 ---GMKRINEQDSIKKVIEKAVN 888


>gi|356497651|ref|XP_003517673.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 827

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 212/429 (49%), Gaps = 5/429 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           SFN V+    + G    AL+    +   K   ILP+  +++++I   C  G V   + L 
Sbjct: 393 SFNDVIYGFCKRGEVFEALQVLEEM---KSSGILPDVYSYSILINAFCGKGDVMKCLDLM 449

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM     +P I +Y +L+ GLCK+N L  AV +   +    C      +  LI+G C  
Sbjct: 450 EEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQ 509

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G++  A KL++ M     +P   +  +LI G    G  D+A+ + + M+     P+ +  
Sbjct: 510 GDMDSAIKLLEEMICNELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIAC 569

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             I++G  + G   +   +L   +E  F++N + Y+ +I  L KEG  E A++L  +M++
Sbjct: 570 NYILDGSCRAGYFKEALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLK 629

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +   P+ V YS LI G  +      A  +   M+  G   N  TY+ LM  F  S K H+
Sbjct: 630 RNVLPSVVNYSTLISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHE 689

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A  I+K+M +     +++ Y+ LI G C + ++++A  ++ +M   GC P+V+ Y+ +I 
Sbjct: 690 AYGIFKEMKERGLCLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIID 749

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G C +  ++ A  +F++M        PDV TY +L++   K      +  L + M D+G 
Sbjct: 750 GFCKSNRIDLATWVFDKM--NRDSVIPDVVTYTVLIDWYHKHGYFDQAHKLYDVMKDKGV 807

Query: 576 DPDLVTCNI 584
            PD +T N+
Sbjct: 808 LPDDITHNV 816



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 256/538 (47%), Gaps = 24/538 (4%)

Query: 136 EAIRLFHTMVDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           +   LF   +D   H +R+   F+ +++V     +   AL+ ++   NAKH+ + P+  T
Sbjct: 228 DTFELFSAFLDSPQHVERSGVVFDVLISVFASNSMLENALDVFS---NAKHVGLEPDIRT 284

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD----EAVLLL 250
            N ++K +     V+   ++F E+  R   P+IYTY  +M+  C +   D    +A ++L
Sbjct: 285 CNFLLKCLVEANRVEFVRRVFEELKDRGPSPNIYTYTIMMNFYCSDVGCDAGMRQAAVIL 344

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            ++   G  PT VT++  I+GLCK G +  A  L+ N+       N  ++N +I+G C +
Sbjct: 345 GKIYRSGEKPTVVTYSTYIHGLCKVGNVEAALMLIRNLHYTNQPLNSHSFNDVIYGFCKR 404

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G + +A+ +L+ M +S  +P+  +Y  +IN     G  +    ++  ME  +   +   Y
Sbjct: 405 GEVFEALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSY 464

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           ++LI GL K+   ++A+ ++  +    CK ++ VY  LIDG C  G  D A ++L EMI 
Sbjct: 465 TSLIHGLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMIC 524

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
           N     AF+  SL++G+++ G   +A+E++  M ++    + +  + ++ G C  G  +E
Sbjct: 525 NELVPTAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKE 584

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  +       G   +  +Y+++I+ LC  G  E AL+L   M  L+    P V  Y+ L
Sbjct: 585 ALTLLEDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRM--LKRNVLPSVVNYSTL 642

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF-------- 602
           ++   KQSN   +++L   M+  G   ++ T  I ++      +  +    F        
Sbjct: 643 ISGFAKQSNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGL 702

Query: 603 ------LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    L +     +     + + E M ++  SP   T+  ++   C+  RI  A
Sbjct: 703 CLDQISYTTLIVGFCNNREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLA 760



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 216/436 (49%), Gaps = 5/436 (1%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K TV ++++ ++ + + G    AL     I N  + N   N+ +FN VI   C+ G V  
Sbjct: 353 KPTVVTYSTYIHGLCKVGNVEAALML---IRNLHYTNQPLNSHSFNDVIYGFCKRGEVFE 409

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
           A+Q+  EM      PD+Y+Y  L++  C +  + + + L++EM+     P+ V++  LI+
Sbjct: 410 ALQVLEEMKSSGILPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIH 469

Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           GLCK   L  A  +  ++    C  +   Y TLI G C++G++D A+ LL+ M+ ++ +P
Sbjct: 470 GLCKKNMLQNAVDIFHSIGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNELVP 529

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
              +  ++I G  KLG       V  +M       +    + ++ G  + G  ++A+ L 
Sbjct: 530 TAFSCRSLIRGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLL 589

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           +   E G   N   Y+A+I  LC+ G P+ A E+L  M+      +   YS+L+ GF + 
Sbjct: 590 EDFQEHGFNLNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQ 649

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
               +AV ++  M K    +N   Y++L+       K+ EA  ++ +M  RG   D ++Y
Sbjct: 650 SNFKRAVNLFTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISY 709

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +++I G CN   +++A  LF EM        P+V TY  +++  CK + I  +  + + M
Sbjct: 710 TTLIVGFCNNREMKKAWALFEEMS--REGCSPNVITYTCIIDGFCKSNRIDLATWVFDKM 767

Query: 571 MDRGCDPDLVTCNIFL 586
                 PD+VT  + +
Sbjct: 768 NRDSVIPDVVTYTVLI 783



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 189/399 (47%), Gaps = 5/399 (1%)

Query: 81  LGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIR 139
           L D   YS LI  +   GD      ++  M   +      S+  +     K ++++ A+ 
Sbjct: 423 LPDVYSYSILINAFCGKGDVMKCLDLMEEMEHSQIKPSIVSYTSLIHGLCKKNMLQNAVD 482

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           +FH+ +    CK     + ++++    +G    A++    ++  +   ++P   +   +I
Sbjct: 483 IFHS-IGASSCKYDSTVYETLIDGFCMQGDMDSAIKLLEEMICNE---LVPTAFSCRSLI 538

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
           +   +LGL D A+++F  M      PD      ++DG C+     EA+ LL++ Q  G  
Sbjct: 539 RGYYKLGLFDQALEVFNAMLRDGIWPDTIACNYILDGSCRAGYFKEALTLLEDFQEHGFN 598

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
             P ++N +I  LCK G   RA +L+  M  +  LP+ V Y+TLI G   + N  +AV+L
Sbjct: 599 LNPHSYNAIIYKLCKEGYPERALELLPRMLKRNVLPSVVNYSTLISGFAKQSNFKRAVNL 658

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
             RMV      N  TY  +++      +  +   +   M+ER   +++  Y+TLI G   
Sbjct: 659 FTRMVKVGITFNIATYTILMSIFSHSHKMHEAYGIFKEMKERGLCLDQISYTTLIVGFCN 718

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
             + + A  L+++M  +GC PN + Y+ +IDG C+  + D A  +  +M  +    +  T
Sbjct: 719 NREMKKAWALFEEMSREGCSPNVITYTCIIDGFCKSNRIDLATWVFDKMNRDSVIPDVVT 778

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           Y+ L+  + + G   +A +++  M     + +++ ++VL
Sbjct: 779 YTVLIDWYHKHGYFDQAHKLYDVMKDKGVLPDDITHNVL 817


>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
 gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Cucumis sativus]
          Length = 660

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 161/631 (25%), Positives = 281/631 (44%), Gaps = 119/631 (18%)

Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL---- 174
           +S + + +  G+  +V+EA+  F T+  + H K T    N ++N++++ G    A+    
Sbjct: 7   QSSVHLLRRLGRIGMVDEALAAFSTL--DSHAKNT-NVRNEIINLLLKSGRVDNAMNVLD 63

Query: 175 -------EF----------YNHIVN--------------------AKHMNILPNTLTFNL 197
                  EF          +N+++                      KH NI P+T+    
Sbjct: 64  EMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKH-NIFPDTIALTQ 122

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I  +CR G  + A  +   + + N   D      L+ GL K     +  LL+ +M+   
Sbjct: 123 LISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKMKDMN 182

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--------CLPNEVTYNTLIHGLCL 309
             PT +TF +LIN LCK   +  A ++ + M  KG          P+ + YNTLI GLC 
Sbjct: 183 IQPTVITFGILINHLCKFRRIDDALEVFEKM--KGEKEETKVFVAPDTIMYNTLIDGLCK 240

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G  ++A+ L+ +M + +C P   T+  +ING  + G      ++   ME  +   N   
Sbjct: 241 VGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVIT 300

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            +TL+ G+ K  +   A++ ++ M +KG K N V Y+  I+  C V   ++A E L EM 
Sbjct: 301 LNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMS 360

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            +GC  +A  Y +L+ G  ++G+   A  +   + +     + VCY+VLI   C+  KL 
Sbjct: 361 KDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLD 420

Query: 490 EARMVWTQMLSRGCKPD------------------------------------VVAYSSM 513
            A+    +M   G KPD                                    V  Y ++
Sbjct: 421 RAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGAL 480

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           IH  C   +++EA+K+F EM  +  K  P+   YNIL+++LCKQ+ ++ ++ LL+ M  R
Sbjct: 481 IHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFR 540

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           G  P+  T N    AL++K        ++L++              FK+++ M+++  +P
Sbjct: 541 GVMPNTTTYNSIFKALRDK--------NWLDK-------------AFKLMDRMVEQACNP 579

Query: 634 QTST------WERVVQELCRPKRI-QAAINK 657
              T      W   V E+ + K+  Q  +N+
Sbjct: 580 DYITMEILTEWLSAVGEITKLKKFTQGCMNR 610



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 120/432 (27%), Positives = 197/432 (45%), Gaps = 26/432 (6%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFI----------FKAYGKAHLV 134
           TF  LI H            V  +M+ EK    E++ +F+               K    
Sbjct: 189 TFGILINHLCKFRRIDDALEVFEKMKGEK----EETKVFVAPDTIMYNTLIDGLCKVGRQ 244

Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
           EEA+ L   M  +  C  T  +FN ++N   + G    A + +N + NA+   I PN +T
Sbjct: 245 EEALCLMGKMRSD-QCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQ---IEPNVIT 300

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            N ++  +C+   +  A++ FR M  +  + +  TY   ++  C  N +++A+  LDEM 
Sbjct: 301 LNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMS 360

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
            DGCFP  V +  LI GL + G L  A+ +V  +   G   + V YN LI   C K  LD
Sbjct: 361 KDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLD 420

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-EERKFHVNEYIYSTL 373
           +A   L+ M  +   P+ VTY T+I+   K+G      + +  M EE       + Y  L
Sbjct: 421 RAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGAL 480

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCK--PNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           I         ++A+K++K+M     K  PNTV+Y+ LID LC+  + + A  +L +M   
Sbjct: 481 IHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFR 540

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N  TY+S+ K   +     KA ++   M +  C  + +   +L   L   G++ + 
Sbjct: 541 GVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEILTEWLSAVGEITKL 600

Query: 492 RMVWTQMLSRGC 503
           +       ++GC
Sbjct: 601 K-----KFTQGC 607


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 154/580 (26%), Positives = 270/580 (46%), Gaps = 66/580 (11%)

Query: 134 VEEAIRLFHTMVDEFHCKR-TVKSFNSVLNVII------QEGLYHR-ALEFYNHIVNAKH 185
           V+  I  ++T+V+ F CKR  +    SV+N I+      + G+ +   +E ++ +     
Sbjct: 176 VKPDIVTYNTLVNAF-CKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGL----- 229

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
            ++ P  +T+  +I   C+   +D+   L+ +M +    PD+ T  +++ GLC+  +L E
Sbjct: 230 RDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTE 289

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRA-------------------AKLVD 286
           A +LL EM   G  P  V++  +I+ L K+G +  A                     ++D
Sbjct: 290 AAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMD 349

Query: 287 NMFLKG----------------CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
            +F  G                 +PN VTY  L+ G C  G+++ A ++L +M     +P
Sbjct: 350 GLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLP 409

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N VT+ +IING  K G       VL  M +     N ++Y+ L+ G F+ G+ E A   +
Sbjct: 410 NVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFY 469

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
           K+M   G + N +++  L++ L R G   EA+ ++ ++++ G   + F YSSLM G+F+ 
Sbjct: 470 KEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKE 529

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G    A+ + ++M + +  ++ V Y+ L  GL   GK  E + V+++M+  G  PD V Y
Sbjct: 530 GNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTY 588

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           +S+++     G  E AL L NEM        P++ TYNIL+  LCK   I   I +L+ M
Sbjct: 589 NSVMNTYFIQGKTENALDLLNEMKSY--GVMPNMVTYNILIGGLCKTGAIEKVISVLHEM 646

Query: 571 MDRGCDPDLVTCNIFLTALKEK------LEAPQDGTDF--------LNELAIRLFKRQRT 616
           +  G  P  +     L A          L+  +   D          N L   L +   T
Sbjct: 647 LAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMT 706

Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
                ++  M+ K +S    T+  +++  C    ++ A N
Sbjct: 707 KKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFN 746



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 232/468 (49%), Gaps = 24/468 (5%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           ++LPN +TF+ +I    + G+++ A+++ R+M   N  P+++ Y  L+DG  +  + + A
Sbjct: 406 HVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAA 465

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
                EM+  G     + F++L+N L ++G +  A  L+ ++  KG   +   Y++L+ G
Sbjct: 466 AGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDG 525

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
              +GN   A+S++  M       + V Y  +  GL++LG+  +   V   M E     +
Sbjct: 526 YFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGK-YEPKSVFSRMIELGLTPD 584

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+++++  F +GK E+A+ L  +M   G  PN V Y+ LI GLC+ G  ++   +L 
Sbjct: 585 CVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLH 644

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM+  G       +  L+K +  S K    ++I K +       N++ Y+ LI  LC  G
Sbjct: 645 EMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLG 704

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
             ++A +V T+M+ +G   D+V Y+++I G C    VE+A   +++ML       P++ T
Sbjct: 705 MTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLV--SGISPNITT 762

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN LL  L     +  +  L++ M +RG  P+  T NI ++    ++   +D        
Sbjct: 763 YNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSG-HGRVGNKRD-------- 813

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +I+L+              M+ K   P T T+  ++Q+  +  +++ A
Sbjct: 814 SIKLYCE------------MITKGFIPTTGTYNVLIQDYAKAGKMRQA 849



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 145/567 (25%), Positives = 263/567 (46%), Gaps = 18/567 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L+  +   GD +  E VL +M +E  +    +F  I   Y K  ++ +A+ +   M
Sbjct: 378 TYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKM 437

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V + +    V  +  +L+   + G +  A  FY  +   K   +  N + F++++  + R
Sbjct: 438 V-QMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEM---KSWGLEENNIIFDILLNNLKR 493

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +  A  L +++  +    D++ Y +LMDG  KE     A+ ++ EM         V 
Sbjct: 494 SGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVA 553

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L  GL + G+      +   M   G  P+ VTYN++++   ++G  + A+ LL+ M 
Sbjct: 554 YNALTKGLLRLGKY-EPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMK 612

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
           +   MPN VTY  +I GL K G       VL  M    +     I+  L+    +  KA+
Sbjct: 613 SYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKAD 672

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
             +++ K++++ G   N +VY+ LI  LCR+G   +A  +L EM+  G +A+  TY++L+
Sbjct: 673 AILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALI 732

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +G+       KA   +  M  +    N   Y+ L+ GL  +G +R+A  + ++M  RG  
Sbjct: 733 RGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLV 792

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P+   Y+ ++ G    G+  +++KL+ EM+       P   TYN+L+    K   +  + 
Sbjct: 793 PNATTYNILVSGHGRVGNKRDSIKLYCEMIT--KGFIPTTGTYNVLIQDYAKAGKMRQAR 850

Query: 565 DLLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
           +LLN M+ RG  P+  T ++ +    K   +   D          RL K    +   K++
Sbjct: 851 ELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMD----------RLLKLSYQNEAKKLL 900

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKR 650
             M +K   P  ST   +      P +
Sbjct: 901 REMCEKGHVPSESTLMYISSNFSAPGK 927



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 137/559 (24%), Positives = 254/559 (45%), Gaps = 70/559 (12%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
             N++++   + GL  RAL+    + +     + P+ +T+N ++   C+ G +  A  + 
Sbjct: 147 GLNTLVDGYCEVGLVSRALDL---VEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVV 203

Query: 216 REM---------------------PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
            E+                      +R+ +P + T+ TL+   CK   +D+   L ++M 
Sbjct: 204 NEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMI 263

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
           + G  P  VT + ++ GLC++G+L  AA L+  M+  G  PN V+Y T+I  L   G + 
Sbjct: 264 MSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVM 323

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A +   +MV      + V   T+++GL K G++ +   +  ++ +     N   Y+ L+
Sbjct: 324 EAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALL 383

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            G  K G  E A  + ++M ++   PN V +S++I+G  + G  ++A E+L +M+     
Sbjct: 384 DGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIM 443

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
            N F Y+ L+ G+F +G+   A   +K+M       N + + +L++ L   G ++EA+ +
Sbjct: 444 PNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSL 503

Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML-------------------- 534
              +LS+G   DV  YSS++ G    G+   AL +  EM                     
Sbjct: 504 IKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLR 563

Query: 535 --CLEPKS----------QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
               EPKS           PD  TYN ++N    Q    +++DLLN M   G  P++VT 
Sbjct: 564 LGKYEPKSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTY 623

Query: 583 NIF-------------LTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG-FKIVEVMLQ 628
           NI              ++ L E L      T  +++  ++ + R R +    +I + ++ 
Sbjct: 624 NILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVD 683

Query: 629 KFLSPQTSTWERVVQELCR 647
             L+     +  ++  LCR
Sbjct: 684 MGLNLNQMVYNTLITVLCR 702



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 136/531 (25%), Positives = 230/531 (43%), Gaps = 79/531 (14%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           ++PN  + NL++ ++C++G +  A+   R     N   D  TY T++ G CK    D+  
Sbjct: 41  VVPNVFSVNLLVHSLCKVGDLGLALGYLR-----NSVFDHVTYNTVVWGFCKRGLADQGF 95

Query: 248 LLLDEMQVDG-CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
            LL EM   G CF + VT N+L+ G C+ G +  A  ++ N+   G   + +  NTL+ G
Sbjct: 96  GLLSEMVKKGVCFDS-VTCNILVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDG 154

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM------EE 360
            C  G + +A+ L++    +   P+ VTY T++N   K G       V+  +      +E
Sbjct: 155 YCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDE 214

Query: 361 ---------------RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
                          R        ++TLI+   K    +D   L++QM+  G  P+ V  
Sbjct: 215 SGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTC 274

Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY------------------------- 440
           S+++ GLCR GK  EA  +L EM N G   N  +Y                         
Sbjct: 275 SSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVV 334

Query: 441 ----------SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
                     +++M G F++GK  +A E+++ + K N V N V Y+ L+ G C+ G +  
Sbjct: 335 RGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEF 394

Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
           A  V  +M      P+VV +SS+I+G    G + +A+++  +M  ++    P+VF Y IL
Sbjct: 395 AETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKM--VQMNIMPNVFVYAIL 452

Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK---LEAPQDGTDFLNE-- 605
           L+   +      +      M   G + + +  +I L  LK      EA     D L++  
Sbjct: 453 LDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGI 512

Query: 606 ---------LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
                    L    FK    S    +V+ M +K +      +  + + L R
Sbjct: 513 YLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLR 563



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 114/256 (44%), Gaps = 12/256 (4%)

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
           M +  N + +N +I  +CRLG+   A  +  EM ++    DI TY  L+ G C  + +++
Sbjct: 684 MGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEK 743

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A     +M V G  P   T+N L+ GL  NG +  A KLV  M  +G +PN  TYN L+ 
Sbjct: 744 AFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVS 803

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
           G    GN   ++ L   M+    +P   TY  +I    K G+      +L  M  R    
Sbjct: 804 GHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGRIP 863

Query: 366 NEYIYSTLISG------------LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           N   Y  LI G            L K     +A KL ++M EKG  P+      +     
Sbjct: 864 NSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMCEKGHVPSESTLMYISSNFS 923

Query: 414 RVGKPDEAEEILFEMI 429
             GK D+A+ +L  +I
Sbjct: 924 APGKRDDAKRLLKTVI 939



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 179/425 (42%), Gaps = 53/425 (12%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M+     P+   +N L+     +G + +   L   M L G +PN  + N L+H LC  G+
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           L  A+  L   V      + VTY T++ G  K G A  G  +L  M ++    +    + 
Sbjct: 61  LGLALGYLRNSVF-----DHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNI 115

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+ G  + G  + A  +   ++  G   + +  + L+DG C VG    A +++ +   NG
Sbjct: 116 LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG 175

Query: 433 CAANAFTYSSLMKGFFESGKGHKA-----------------------VEIWKDMAKNNCV 469
              +  TY++L+  F + G   KA                       VE W  +   +  
Sbjct: 176 VKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGL--RDLQ 233

Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
              V ++ LI   C+   + +   ++ QM+  G  PDVV  SS+++GLC  G + EA  L
Sbjct: 234 PTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAML 293

Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
             EM  +     P+  +Y  +++AL K   +  + +  + M+ RG   DLV C   +   
Sbjct: 294 LREMYNM--GLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMM--- 348

Query: 590 KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPK 649
                   DG          LFK  ++    ++ + +L+  L P   T+  ++   C+  
Sbjct: 349 --------DG----------LFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVG 390

Query: 650 RIQAA 654
            ++ A
Sbjct: 391 DVEFA 395


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 201/393 (51%), Gaps = 5/393 (1%)

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           I+ +    LV  A  +  EM      PD+ ++C L+ G  K          LD M   G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
           FP  + +N LI+ LCK G L  A   +  M  + C PN V+YN +I G C   N++KA++
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRM-PQHCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
            L  M      P    Y +I+    K G       V   M  +    +   ++ L+SGL+
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           +  K  +A +L++ M  +GCKP+ V Y+ +I GLC+  K DEA  +L  M     +    
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV--LIHGLCEDGKLREARMVWT 496
           TY++L+    +  +  +A E+++ MA+  C   E  YSV  LI+GLC+  +  EA+ ++ 
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
           +M  RG  P VV Y++++ GL +   +++A++L   ML   P   P++FTY IL+++LCK
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPA--PNMFTYEILISSLCK 357

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              +  +  LL++M D+G  P L    + L+ L
Sbjct: 358 TDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRL 390



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 220/438 (50%), Gaps = 8/438 (1%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V+S   ++    + G + R     + ++ A    + PN + +N +I  +C+ G++  A  
Sbjct: 29  VQSHCLLIRGFFKSGSFQRGCSQLDRMLEA---GLFPNAILYNNLISCLCKAGMLAEAES 85

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
             + MP ++C P++ +Y  ++DG CK   +++A+  L EM+  G  PTP  ++ ++   C
Sbjct: 86  YLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFC 144

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G + +A  +   M  KGC P+ V +N L+ GL     + +A  L   M +  C P+ V
Sbjct: 145 KTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVV 204

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T+I GL K  +  +   +L  M++         Y+TLI  L K  + + A +++++M
Sbjct: 205 TYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKM 264

Query: 394 MEKGCKPNTVVYSALI--DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            E  C      YS LI  +GLC+  +P EA+E+  EM   G +    TY++L++G   + 
Sbjct: 265 AEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTA 324

Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
           K   A+E+   M       N   Y +LI  LC+  ++ EA  + + M  +G  P +  + 
Sbjct: 325 KLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWE 384

Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            ++  L  AG +++A +L+ EM  +    Q  V + NILL+ + ++ ++  + D L  M 
Sbjct: 385 VLLSRLARAGRLDDAFELYKEMSRI--NCQQLVGSSNILLDGILRRGSVDEAKDFLKQMT 442

Query: 572 DRGCDPDLVTCNIFLTAL 589
           D G  PD  T +  +  L
Sbjct: 443 DTGIVPDKFTYDKLVVGL 460



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 210/420 (50%), Gaps = 8/420 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N++++ + + G+   A  +   +      +  PN +++N++I   C+   ++ A+   R
Sbjct: 67  YNNLISCLCKAGMLAEAESYLKRMPQ----HCAPNVVSYNIIIDGYCKARNIEKALAFLR 122

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM      P  + Y +++   CK   + +A+ +  EM   GC P  V FNVL++GL +  
Sbjct: 123 EMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRAR 182

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           ++  A +L  +M  +GC P+ VTYNT+I GLC    LD+AV LL+RM      P  VTY 
Sbjct: 183 KIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYT 242

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI--SGLFKEGKAEDAMKLWKQMM 394
           T+I+ L K  R      V   M E      E  YS LI  +GL K  +  +A +++++M 
Sbjct: 243 TLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMR 302

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            +G  P  V Y+ L++GL    K  +A E+ + M++   A N FTY  L+    ++ +  
Sbjct: 303 GRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVE 362

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A ++   M     V +   + VL+  L   G+L +A  ++ +M    C+  V + + ++
Sbjct: 363 EAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILL 422

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G+   GSV+EA     +M   +    PD FTY+ L+  LC Q     +  L+  ++  G
Sbjct: 423 DGILRRGSVDEAKDFLKQMT--DTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 202/421 (47%), Gaps = 11/421 (2%)

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRRE--KRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           + +LI     +G     E  L RM +     VV   S+  I   Y KA  +E+A+     
Sbjct: 67  YNNLISCLCKAGMLAEAESYLKRMPQHCAPNVV---SYNIIIDGYCKARNIEKALAFLRE 123

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           M +E     T  +++S++    + G   +A++ +  +  AK     P+ + FN+++  + 
Sbjct: 124 M-EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEM-PAKGCE--PDIVNFNVLLSGLW 179

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
           R   +  A +LFR M  R C+PD+ TY T++ GLCK  +LDEAV LL+ M+ +   PT V
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI--HGLCLKGNLDKAVSLLD 321
           T+  LI+ LCK   L +A ++ + M    C   E  Y+ LI  +GLC      +A  +  
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M      P  VTY T++ GL+   +  D   +   M ++    N + Y  LIS L K  
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTD 359

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
           + E+A KL   M +KG  P+  ++  L+  L R G+ D+A E+  EM    C     + +
Sbjct: 360 QVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSN 419

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            L+ G    G   +A +  K M     V ++  Y  L+ GLC  GK  +AR +  +++  
Sbjct: 420 ILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRD 479

Query: 502 G 502
           G
Sbjct: 480 G 480


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 178/320 (55%)

Query: 215 FREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
            REM      PD   Y  ++ G C+   + +A+ + DEM   GC P  VT+N L+NGLCK
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
              L  A  L++ M  +G  P+  T+ TLIHG C++G LDKA+ L D M+  +  P+ VT
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y T+I+G+ + G       +   M  R+   N   YS LI    ++G+ EDA     +M+
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
            KG  PN + Y+++I G CR G   + ++ L +M+ N  + +  TY++L+ G+ +  K H
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A ++   M K     + V Y++LI+G    G ++EA  ++ +M ++G +PD   Y SMI
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 515 HGLCNAGSVEEALKLFNEML 534
           +G   AG+ +EA +L +EML
Sbjct: 304 NGHVTAGNSKEAFQLHDEML 323



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 171/329 (51%), Gaps = 2/329 (0%)

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L EM+  G  P  V + ++I G C+ G +  A ++ D M   GCLP+ VTYNTL++GLC 
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           +  L  A  LL+ M      P+  T+ T+I+G    G+     ++  +M  ++   +   
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI G+ ++G  + A  LW  M  +   PN V YS LID  C  G+ ++A   L EMI
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           N G   N  TY+S++KG+  SG   K  +  + M  N    + + Y+ LIHG  ++ K+ 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           +A  +   M     +PDVV Y+ +I+G    G+V+EA  +F +M       +PD +TY  
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA--KGIEPDRYTYMS 301

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           ++N      N   +  L + M+ RG  PD
Sbjct: 302 MINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 167/319 (52%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           ++P+ + + +VI   CR GL+ +A+++  EM    C PD+ TY TL++GLCKE RL +A 
Sbjct: 12  LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 71

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            LL+EM+  G  P   TF  LI+G C  G+L +A +L D M  +   P+ VTYNTLI G+
Sbjct: 72  GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 131

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C +G+LDKA  L D M + +  PN VTY  +I+   + G+  D    L  M  +    N 
Sbjct: 132 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 191

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             Y+++I G  + G      K  ++MM     P+ + Y+ LI G  +  K  +A ++L  
Sbjct: 192 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 251

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M       +  TY+ L+ GF   G   +A  I++ M       +   Y  +I+G    G 
Sbjct: 252 MEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGN 311

Query: 488 LREARMVWTQMLSRGCKPD 506
            +EA  +  +ML RG  PD
Sbjct: 312 SKEAFQLHDEMLQRGFAPD 330



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 173/316 (54%), Gaps = 4/316 (1%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +   + +A L+ +A+R+   MV    C   V ++N++LN + +E    R L+    +
Sbjct: 19  YTMVIGGFCRAGLMSDALRVRDEMVG-CGCLPDVVTYNTLLNGLCKE---RRLLDAEGLL 74

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
              +   + P+  TF  +I   C  G +D A+QLF  M  +   PDI TY TL+DG+C++
Sbjct: 75  NEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQ 134

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
             LD+A  L D+M     FP  VT+++LI+  C+ G++  A   +D M  KG LPN +TY
Sbjct: 135 GDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTY 194

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N++I G C  GN+ K    L +M+ +K  P+ +TY T+I+G +K  +  D  ++L  ME+
Sbjct: 195 NSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEK 254

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
            K   +   Y+ LI+G    G  ++A  ++++M  KG +P+   Y ++I+G    G   E
Sbjct: 255 EKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKE 314

Query: 421 AEEILFEMINNGCAAN 436
           A ++  EM+  G A +
Sbjct: 315 AFQLHDEMLQRGFAPD 330



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 151/290 (52%), Gaps = 2/290 (0%)

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G +P+ V Y  +I G C  G +  A+ + D MV   C+P+ VTY T++NGL K  R +D 
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +L  M ER    +   ++TLI G   EGK + A++L+  M+ +  +P+ V Y+ LIDG
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           +CR G  D+A ++  +M +     N  TYS L+    E G+   A     +M     + N
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            + Y+ +I G C  G + + +    +M+     PD++ Y+++IHG      + +A KL N
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            M   + K QPDV TYN+L+N      N+  +  +   M  +G +PD  T
Sbjct: 251 MME--KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 298



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 140/282 (49%), Gaps = 16/282 (5%)

Query: 387 MKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKG 446
           M   ++M   G  P+ V+Y+ +I G CR G   +A  +  EM+  GC  +  TY++L+ G
Sbjct: 1   MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 60

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             +  +   A  +  +M +     +   ++ LIHG C +GKL +A  ++  ML++  +PD
Sbjct: 61  LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 120

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDL 566
           +V Y+++I G+C  G +++A  L+++M   E    P+  TY+IL+++ C++  +  +   
Sbjct: 121 IVTYNTLIDGMCRQGDLDKANDLWDDMHSRE--IFPNHVTYSILIDSHCEKGQVEDAFGF 178

Query: 567 LNSMMDRGCDPDLVTCNIFLTA------------LKEKLEAPQDGTDFL--NELAIRLFK 612
           L+ M+++G  P+++T N  +                +K+   +   D +  N L     K
Sbjct: 179 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIK 238

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             +    FK++ +M ++ + P   T+  ++        +Q A
Sbjct: 239 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEA 280



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/190 (30%), Positives = 100/190 (52%), Gaps = 6/190 (3%)

Query: 146 DEFHCKRTVK---SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
           D+ H +       +++ +++   ++G    A  F + ++N     ILPN +T+N +IK  
Sbjct: 145 DDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINK---GILPNIMTYNSIIKGY 201

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
           CR G V    +  ++M V    PD+ TY TL+ G  KE+++ +A  LL+ M+ +   P  
Sbjct: 202 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDV 261

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+N+LING   +G +  A  + + M  KG  P+  TY ++I+G    GN  +A  L D 
Sbjct: 262 VTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDE 321

Query: 323 MVASKCMPNE 332
           M+     P++
Sbjct: 322 MLQRGFAPDD 331


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 137/501 (27%), Positives = 245/501 (48%), Gaps = 7/501 (1%)

Query: 82  GDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           G   F +L     + G  +       +M+R +     +S   +   + K    +   R F
Sbjct: 62  GFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFF 121

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             M+     K TV ++N +++ + +EG    A   +  +   K   ++P+T+T+N +I  
Sbjct: 122 KDMIGA-GSKPTVFTYNIMIDCMWKEGDIEAARGLFEEM---KFRGLIPDTVTYNSMIDG 177

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
             ++G +D+ +  F EM   +CEPD+ TY +L++  CK  +L + +    EM+  G  P 
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            V+++ L++  CK   + +A K   +M   G +PNE TY +L+   C  GNL  A  L +
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            M+      N VTY  +I+GL    R  +  ++   M       N   Y+ LI G  K  
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
             + A++L  ++  +G +P+ ++Y   I GLC + K + A+ ++ EM  NG  AN   Y+
Sbjct: 358 NMDRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYT 417

Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
           +LM  +F+SG   + + + ++M + +     V + VLI GLC++  + +A   + +M + 
Sbjct: 418 TLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSND 477

Query: 502 -GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
            G +P+   Y++MI GLC    V+ A  LF +M   +    PD   Y  L++   KQ N+
Sbjct: 478 FGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMA--QEGLVPDRTAYTSLMDGNLKQGNM 535

Query: 561 SHSIDLLNSMMDRGCDPDLVT 581
             ++ L + M + G   DL+ 
Sbjct: 536 LEALALRDKMAEIGMKLDLLA 556



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 214/434 (49%), Gaps = 6/434 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F+++ +V+I  G+   A + ++ +   K   + P T + N ++    +LG  D   + F+
Sbjct: 66  FDALFSVLIDLGMLEEATQCFSKM---KRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFK 122

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M     +P ++TY  ++D + KE  ++ A  L +EM+  G  P  VT+N +I+G  K G
Sbjct: 123 DMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVG 182

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L       + M    C P+ +TYN+LI+  C  G L K +     M  S   PN V+Y 
Sbjct: 183 RLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYS 242

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+++   K        +  + M       NE+ Y++L+    K G   DA +L  +M+E 
Sbjct: 243 TLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEV 302

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G + N V Y+ALIDGLC   +  EAE++  +M+  G   N  +Y++L+ GF ++    +A
Sbjct: 303 GVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRA 362

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           +E+  ++       + + Y   I GLC   K+  A++V  +M   G K + + Y++++  
Sbjct: 363 LELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDA 422

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM-DRGC 575
              +G+  E L L  EM  L+   +  V T+ +L++ LCK   +S +ID    M  D G 
Sbjct: 423 YFKSGNPTEGLHLLEEMQELD--HEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGL 480

Query: 576 DPDLVTCNIFLTAL 589
            P+       +  L
Sbjct: 481 QPNAAVYTAMIDGL 494



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 224/455 (49%), Gaps = 7/455 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I      GD ++   +   M+    +    ++  +   YGK   +++ +  F  M
Sbjct: 135 TYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
                C+  V ++NS++N   + G   + LEFY  +   K   + PN ++++ ++   C+
Sbjct: 195 -KSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREM---KQSGLKPNVVSYSTLVDAFCK 250

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
             ++  AI+ + +M      P+ +TY +L+D  CK   L +A  L +EM   G     VT
Sbjct: 251 EDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVT 310

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+GLC    +  A KL   M   G +PN  +YN LIHG     N+D+A+ LL+ + 
Sbjct: 311 YTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 370

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKA 383
                P+ + YGT I GL  L + ++ A+V+M+ M+E     N  IY+TL+   FK G  
Sbjct: 371 GRGIQPDLLLYGTFIWGLCGLEK-IEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNP 429

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN-GCAANAFTYSS 442
            + + L ++M E   +   V +  LIDGLC+     +A +    M N+ G   NA  Y++
Sbjct: 430 TEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTA 489

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++ G  +  +   A  +++ MA+   V +   Y+ L+ G  + G + EA  +  +M   G
Sbjct: 490 MIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIG 549

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
            K D++AY+S++ G      +++A     EM+  E
Sbjct: 550 MKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEE 584



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/527 (25%), Positives = 235/527 (44%), Gaps = 29/527 (5%)

Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           G  H +E    + H +     C R     NS+L  I+         + ++ + + +++  
Sbjct: 5   GFNHTIESYCIVAHILF----CARMYYDANSILREIVLSKAELEECDVFDELWSTRNV-C 59

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P    F+ +   +  LG+++ A Q F +M      P   +   L+    K  + D    
Sbjct: 60  VPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 119

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
              +M   G  PT  T+N++I+ + K G++  A  L + M  +G +P+ VTYN++I G  
Sbjct: 120 FFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYG 179

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G LD  V   + M +  C P+ +TY ++IN   K G+   G      M++     N  
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YSTL+    KE   + A+K +  M   G  PN   Y++L+D  C++G   +A  +  EM
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM 299

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +  G   N  TY++L+ G  ++ +  +A +++  M     + N   Y+ LIHG  +   +
Sbjct: 300 LEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNM 359

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
             A  +  ++  RG +PD++ Y + I GLC    +E A  + NEM   E   + +   Y 
Sbjct: 360 DRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEM--QENGIKANTLIYT 417

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-KEKLEAPQDGTDFLNELA 607
            L++A  K  N +  + LL  M +   +  +VT  + +  L K KL +           A
Sbjct: 418 TLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSK----------A 467

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           I  F R     G           L P  + +  ++  LC+  +++AA
Sbjct: 468 IDYFGRMSNDFG-----------LQPNAAVYTAMIDGLCKENQVKAA 503



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 164/359 (45%), Gaps = 5/359 (1%)

Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
           MRR   V  E ++  +  A  K   + +A RL + M+ E   +  V ++ ++++ +    
Sbjct: 264 MRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML-EVGVEWNVVTYTALIDGLCDAE 322

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
               A + +  +V A    ++PN  ++N +I    +   +D A++L  E+  R  +PD+ 
Sbjct: 323 RMKEAEKLFGKMVTA---GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLL 379

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
            Y T + GLC   +++ A ++++EMQ +G     + +  L++   K+G       L++ M
Sbjct: 380 LYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEM 439

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS-KCMPNEVTYGTIINGLVKLGR 347
                    VT+  LI GLC    + KA+    RM       PN   Y  +I+GL K  +
Sbjct: 440 QELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQ 499

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
                 +   M +     +   Y++L+ G  K+G   +A+ L  +M E G K + + Y++
Sbjct: 500 VKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTS 559

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           L+ G  +  +  +A   L EMI      +      ++K  +E G   +AV +   + K+
Sbjct: 560 LVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEAVGLQSYLMKH 618



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 86/213 (40%), Gaps = 20/213 (9%)

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           E+W    +N CV     +  L   L + G L EA   +++M      P   + + ++H  
Sbjct: 51  ELWS--TRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKF 108

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
              G  +   + F +M+     S+P VFTYNI+++ + K+ +I  +  L   M  RG  P
Sbjct: 109 AKLGKTDGVKRFFKDMIG--AGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIP 166

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELA--------------IRLF-KRQRTSGGFKI 622
           D VT N  +     K+    D   F  E+               I  F K  +   G + 
Sbjct: 167 DTVTYNSMIDGYG-KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEF 225

Query: 623 VEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              M Q  L P   ++  +V   C+   +Q AI
Sbjct: 226 YREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAI 258


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 235/470 (50%), Gaps = 30/470 (6%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMP-VRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           +   FN ++  + R+  V    +++  M    +  PD+ TY  L++GLCK  R+ +A+ +
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 250 LDEM--QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF--LKGCLPNEVTYNTLIH 305
           LD M  Q     P  VT N +++GLCK+G +  A   V+     + GC PN VTYN LI 
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF-- 363
             C  GN+  A  L+++M       N VT  TI+ GL + GR   GA +    E+R    
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRT--GAALEFFREKRTVWP 312

Query: 364 --HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               N   YSTL+  L        AM+L+ + M +G  P+ ++Y  +I GL + G+ ++A
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIH 480
             +   M   G   +   Y+ L+ GF    + H+A E+ ++M K   +  +VC Y+ L+ 
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEM-KEVGIRPDVCTYNTLLS 431

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           G C+ G       +  +M+  GC+P V+ + +++HG C  G ++EAL++   M   E   
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMD--ESGI 489

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P+   YN L++ LCK+ ++  +I+L + M ++    ++ T N  L  L++K   P+   
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDK-NMPEKAF 548

Query: 601 DFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
           + ++++     + +R    +  V+V+++         W  V+ E  R KR
Sbjct: 549 ELMDQM-----REERCFPDYVTVDVLME---------WLPVIGETDRLKR 584



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/409 (27%), Positives = 211/409 (51%), Gaps = 43/409 (10%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMDGLCKENRLD 244
           ++ P+ +T+ +++  +C+ G V +A+++   M  ++ +  PD+ T  T++DGLCK  R+ 
Sbjct: 167 SVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQ 226

Query: 245 EAVLLLDEM--QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           EA+  +++    V GC P  VT+N LI+  C+ G +  A +LV+ M  +G   N VT NT
Sbjct: 227 EALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNT 286

Query: 303 LIHGLCLKG-------------------------------------NLDKAVSLLDRMVA 325
           ++ GLC  G                                     N+  A+ L    ++
Sbjct: 287 IVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMS 346

Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
               P+ + Y T+I+GL + GR  D   +  SM+E  F ++   Y+ LI+G  ++ +  +
Sbjct: 347 EGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE 406

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A +L ++M E G +P+   Y+ L+ G C+ G     +E+L +MI++GC  +  T+ +L+ 
Sbjct: 407 AYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVH 466

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
           G+ + GK  +A+ I + M ++    N V Y+ LI  LC+ G +  A  ++ +M  +    
Sbjct: 467 GYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
           +V  +++++ GL +    E+A +L ++M   E +  PD  T ++L+  L
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDQM--REERCFPDYVTVDVLMEWL 573



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 189/406 (46%), Gaps = 9/406 (2%)

Query: 130 KAHLVEEAIRLFHTMV-DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           KA  V +A+R+   M   +   +  V + N+V++ + + G    AL F    +++ H   
Sbjct: 184 KAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVH-GC 242

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PNT+T+N +I   CR+G +  A +L  +M       +I T  T++ GLC+  R   A+ 
Sbjct: 243 PPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALE 302

Query: 249 LLDEMQVDGCFP----TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
              E +    +P      VT++ L+  L     +G A +L      +G  P+ + Y T+I
Sbjct: 303 FFREKRT--VWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMI 360

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
            GL   G L+ A S+   M  +    +   Y  +I G  +  R  +   +L  M+E    
Sbjct: 361 SGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIR 420

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
            +   Y+TL+SG  K G      +L  +M++ GC+P+ + +  L+ G C+VGK DEA  I
Sbjct: 421 PDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRI 480

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           L  M  +G   N   Y++L+    + G    A+E++ +M + +   N   ++ L+ GL +
Sbjct: 481 LRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRD 540

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
                +A  +  QM    C PD V    ++  L   G  +  LK F
Sbjct: 541 KNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR-LKRF 585



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 161/326 (49%), Gaps = 10/326 (3%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           +  A+ +   +  A  L   M +E    + + + N+++  + + G    ALEF+      
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENE-GVPQNIVTLNTIVGGLCRAGRTGAALEFFR----- 305

Query: 184 KHMNILP----NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   + P    N +T++ ++  +     V  A++LF E       PD   Y T++ GL +
Sbjct: 306 EKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQ 365

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
             RL++A  +   M+  G       +N+LI G C+   L  A +L+  M   G  P+  T
Sbjct: 366 AGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCT 425

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
           YNTL+ G C  G+      LL +M+   C P+ +T+GT+++G  K+G+  +  R+L SM+
Sbjct: 426 YNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMD 485

Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
           E   H N  IY+TLI  L K G  + A++L+ +M EK    N   ++AL+ GL     P+
Sbjct: 486 ESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPE 545

Query: 420 EAEEILFEMINNGCAANAFTYSSLMK 445
           +A E++ +M    C  +  T   LM+
Sbjct: 546 KAFELMDQMREERCFPDYVTVDVLME 571



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 26/168 (15%)

Query: 493 MVWTQMLSRGC---KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           M     L +GC   +PDVV Y  +++GLC AG V +AL++ + M   +   +PDV T N 
Sbjct: 155 MARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNT 214

Query: 550 LLNALCKQSNISHSIDLLNSMMD--RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           +++ LCK   +  ++  +   M    GC P+ VT N  + A                   
Sbjct: 215 VVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAF------------------ 256

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
               +    S  +++VE M  + +     T   +V  LCR  R  AA+
Sbjct: 257 ---CRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAAL 301


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 207/387 (53%), Gaps = 8/387 (2%)

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
           R+  FY  ++++ +    PN   FN+++   C++G V +A  +F E+P R   P + ++ 
Sbjct: 125 RSWAFYLEVLDSGYP---PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           TL+ G CK   ++E   L   M+ +   P   TF+ LINGLCK G L   + L D M  K
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G +PN VT+  LI G C  G +D A+     M+A    P+ VTY  +INGL K+G   + 
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            R++  M       +   ++TLI G  K G  E A+++ ++M+E+G + + V ++ LI G
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           LCR G+  +AE +L +M++ G   +  TY+ ++  F + G      ++ K+M  +  V  
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V Y+ L++GLC+ G+++ A+M+   ML+ G  P+ + Y+ ++ G    GS  + + +FN
Sbjct: 422 VVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHGSSVD-VDIFN 480

Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQS 558
                E     D  +Y  L+N   K S
Sbjct: 481 S----EKGLVKDYASYTALVNESSKTS 503



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 197/369 (53%), Gaps = 7/369 (1%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
           +PV+ CE  +     L     +   L+ +     E+   G  P    FNVL++G CK G 
Sbjct: 103 VPVQGCENLLRRVVRL-----RPVELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGG 157

Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
           +G A  + D +  +G  P  V++NTLI G C  G +++   L   M + +  P+  T+  
Sbjct: 158 VGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSA 217

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           +INGL K GR  +G+ +   M  +    N   ++ LI G  K GK + A+K ++ M+ +G
Sbjct: 218 LINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQG 277

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
            +P+ V Y+ALI+GLC+VG   EA  ++ EM  +G   +  T+++L+ G  + G    A+
Sbjct: 278 VRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESAL 337

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           EI + M +     ++V ++VLI GLC DG++ +A  +   MLS G KPD   Y+ ++   
Sbjct: 338 EIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCF 397

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C  G+V    KL  EM        P V TYN L+N LCKQ  + ++  LL++M++ G  P
Sbjct: 398 CKKGNVXMGFKLLKEMQ--SDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAP 455

Query: 578 DLVTCNIFL 586
           + +T NI L
Sbjct: 456 NDITYNILL 464



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 159/342 (46%), Gaps = 23/342 (6%)

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           L+++ +    ++ S   PN   +  +++G  K+G       V   + +R        ++T
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           LISG  K G  E+  +L   M  +   P+   +SALI+GLC+ G+ DE   +  EM   G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
              N  T++ L+ G  + GK   A++ ++ M       + V Y+ LI+GLC+ G L+EAR
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M + G +PD + ++++I G C  G +E AL++   M+  E   + D   + +L++
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMV--EEGIELDDVAFTVLIS 360

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
            LC+   +  +  +L  M+  G  PD  T  + +                         K
Sbjct: 361 GLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCF---------------------CK 399

Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +     GFK+++ M      P   T+  ++  LC+  +++ A
Sbjct: 400 KGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNA 441


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/418 (30%), Positives = 221/418 (52%), Gaps = 5/418 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN+++  +   G    AL F++H++    +    +  ++  +I  +C++G    A+Q+ 
Sbjct: 140 TFNTLIKGLCLNGKVKEALHFHDHVL---ALGFHLDQFSYGTLINGLCKIGETRTALQML 196

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R++  +  + ++  Y T++D LCK   + +A  L  +M      P  VTF+ LI G C  
Sbjct: 197 RKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIV 256

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A  L   M LK   P+  T+N L+  LC +GNL  A ++L  M+    MPN VTY
Sbjct: 257 GQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTY 316

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++++G   + +      VL ++ +     N + Y T+I+G  K    ++A+ L+  M  
Sbjct: 317 SSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQF 376

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           KG  P+ V Y++LIDGLC+ G+   A E++ EM +NG  AN FTY+ L+    ++    +
Sbjct: 377 KGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQ 436

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A+ + K +       +   +++LI+GLC+ G+L+ A+ V+  +LS+G   +   Y+ M++
Sbjct: 437 AIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVN 496

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           GLC  G  +EA  L ++M   +    PD  TY  L+ AL  +     +  LL  M+ R
Sbjct: 497 GLCKEGLFDEAEALLSKM--DDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIAR 552



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 139/491 (28%), Positives = 241/491 (49%), Gaps = 28/491 (5%)

Query: 120 SFIFIF---KAYGKAHLVEEAIRLFHTMVDEFHCKRT-----VKSFNSVLNVIIQEGLYH 171
           SF+F F   + Y +   V   I + + +    H  RT     +  FN +L  +++    H
Sbjct: 24  SFLFPFLITRLYSQFQFVPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNH 83

Query: 172 --------RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
                   R LEF+          I P+  TFN++I   C +  ++ A  +  ++     
Sbjct: 84  YPTAISLSRRLEFHG---------ITPDIFTFNILINCYCHMAEMNFAFSMMAKILKMGY 134

Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
           EPD  T+ TL+ GLC   ++ EA+   D +   G      ++  LINGLCK GE   A +
Sbjct: 135 EPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQ 194

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           ++  +  K    N V YNT+I  LC    +  A  L  +M+A K  P+ VT+  +I G  
Sbjct: 195 MLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFC 254

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
            +G+  +   +   M  +  + + Y ++ L+  L KEG  + A  +   MM++G  PN V
Sbjct: 255 IVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVV 314

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
            YS+L+DG C V + ++A+ +L  +   G A NA +Y +++ GF +     +A+ ++ DM
Sbjct: 315 TYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDM 374

Query: 464 AKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
                  ++V Y+ LI GLC+ G++  A  +  +M   G   ++  Y+ +I  LC    V
Sbjct: 375 QFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHV 434

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           ++A+ L  ++   +   QPD++T+NIL+  LCK   + ++ D+   ++ +G   +  T N
Sbjct: 435 DQAIALVKKI--KDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYN 492

Query: 584 IFLTAL-KEKL 593
           I +  L KE L
Sbjct: 493 IMVNGLCKEGL 503



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 180/356 (50%), Gaps = 40/356 (11%)

Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
           K  V  +N++++ + +  L   A E Y+ ++  K   I P+ +TF+ +I   C +G ++ 
Sbjct: 205 KINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKK---ISPDVVTFSALIYGFCIVGQLEE 261

Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL-- 268
           A  LFREM ++N  PD YT+  L+D LCKE  L  A  +L  M  +G  P  VT++ L  
Sbjct: 262 AFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMD 321

Query: 269 ---------------------------------INGLCKNGELGRAAKLVDNMFLKGCLP 295
                                            ING CK   +  A  L ++M  KG  P
Sbjct: 322 GYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAP 381

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           ++VTYN+LI GLC  G +  A  L+D M  +    N  TY  +I+ L K    VD A  L
Sbjct: 382 DKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCK-NHHVDQAIAL 440

Query: 356 M-SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
           +  ++++    + Y ++ LI GL K G+ ++A  +++ ++ KG   N   Y+ +++GLC+
Sbjct: 441 VKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCK 500

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
            G  DEAE +L +M +NG   +A TY +L++  F   +  KA ++ ++M   + VY
Sbjct: 501 EGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVY 556


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 223/434 (51%), Gaps = 23/434 (5%)

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           +N  P I  +  ++  L K      A+ L  +M+++G      TFN+LIN   + G    
Sbjct: 64  KNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSL 123

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           +  +   +  KG  PN +T+NTLI GLCLKG++ +A++  D++VA     ++V+YGT+IN
Sbjct: 124 SFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLIN 183

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           GL K+GR     ++L  ++ +    N  +Y+ +I  + K     DA  L+ QM+ K   P
Sbjct: 184 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISP 243

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           +    ++LI G C +G+  EA  +L +MI        +T+S L+  F + GK  +A  + 
Sbjct: 244 DDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMML 303

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
               K + + + V Y+ L+ G C   ++ +A+ ++  M SRG   +V +Y++MI+GLC  
Sbjct: 304 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKI 363

Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
             V+EA+ LF EM C   K  P+V TYN L++ L K   IS  + L++ M DRG  P+++
Sbjct: 364 KMVDEAVNLFEEMRC--RKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNII 421

Query: 581 TCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWER 640
           T N  L AL +     +         AI L    +  G            + P   T+  
Sbjct: 422 TYNSILDALCKNHHVDK---------AIALLTNLKDQG------------IRPDMYTYTV 460

Query: 641 VVQELCRPKRIQAA 654
           +++ LC+  +++ A
Sbjct: 461 LIKGLCQSGKLEDA 474



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 134/468 (28%), Positives = 235/468 (50%), Gaps = 24/468 (5%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           +FN ++N   Q GL   +   +  I+        PN +TFN +IK +C  G +  A+   
Sbjct: 107 TFNILINCFSQLGLNSLSFSVFGKILKK---GFDPNAITFNTLIKGLCLKGHIHQALNFH 163

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF--PTPVTFNVLINGLC 273
            ++  +    D  +Y TL++GLCK  R+  A+ LL   +VDG    P  V +N++I+ +C
Sbjct: 164 DKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLK--RVDGKLVQPNAVMYNMIIDNMC 221

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K   +  A  L   M  K   P++ T N+LI+G C+ G L +AV LL +M+     P   
Sbjct: 222 KAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMY 281

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG--LFKE-GKAEDAMKLW 390
           T+  +++   K G+  +   +L    ++   ++   Y++L+ G  L KE  KA+D   ++
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKD---IF 338

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             M  +G   N   Y+ +I+GLC++   DEA  +  EM       N  TY+SL+ G  + 
Sbjct: 339 DSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKL 398

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           GK    +++  +M       N + Y+ ++  LC++  + +A  + T +  +G +PD+  Y
Sbjct: 399 GKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTY 458

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + +I GLC +G +E+A K+F ++L        DV+TY +++   C +     ++ LL+ M
Sbjct: 459 TVLIKGLCQSGKLEDAQKVFEDLLV--KGYNLDVYTYTVMIQGFCVKGLFDAALALLSKM 516

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
            D GC P+  T  I + +L EK E         N++A +L +     G
Sbjct: 517 EDNGCIPNAKTYEIVILSLFEKDE---------NDMAEKLLREMIARG 555



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 211/406 (51%), Gaps = 7/406 (1%)

Query: 130 KAHLVEEAIRLFHTMVDE-FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
           K H + +A+     +V + FH  +   S+ +++N + + G    AL+     V+ K +  
Sbjct: 153 KGH-IHQALNFHDKVVAQGFHLDQV--SYGTLINGLCKVGRITAALQLLKR-VDGKLVQ- 207

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
            PN + +N++I  +C+  LV++A  L+ +M  +   PD +T  +L+ G C   +L EAV 
Sbjct: 208 -PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVG 266

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
           LL +M ++   P   TF++L++  CK G++  A  ++     K  + + VTYN+L+ G C
Sbjct: 267 LLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYC 326

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
           L   ++KA  + D M +   + N  +Y T+INGL K+    +   +   M  RK   N  
Sbjct: 327 LVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVV 386

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y++LI GL K GK    +KL  +M ++G  PN + Y++++D LC+    D+A  +L  +
Sbjct: 387 TYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNL 446

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
            + G   + +TY+ L+KG  +SGK   A ++++D+       +   Y+V+I G C  G  
Sbjct: 447 KDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLF 506

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
             A  + ++M   GC P+   Y  +I  L      + A KL  EM+
Sbjct: 507 DAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMI 552



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 189/398 (47%), Gaps = 25/398 (6%)

Query: 260 PTP--VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
           PTP  + FN +++ L K      A  L   M L G + +  T+N LI+     G    + 
Sbjct: 66  PTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSF 125

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           S+  +++     PN +T+ T+I GL   G           +  + FH+++  Y TLI+GL
Sbjct: 126 SVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGL 185

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K G+   A++L K++  K  +PN V+Y+ +ID +C+    ++A ++  +M+    + + 
Sbjct: 186 CKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDD 245

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           FT +SL+ GF   G+  +AV +   M   N       +S+L+   C++GK++EA+M+   
Sbjct: 246 FTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGV 305

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
            + +    DVV Y+S++ G C    + +A  +F+ M         +V +Y  ++N LCK 
Sbjct: 306 TMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMA--SRGVIANVQSYTTMINGLCKI 363

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTS 617
             +  +++L   M  R   P++VT N  +           DG          L K  + S
Sbjct: 364 KMVDEAVNLFEEMRCRKIIPNVVTYNSLI-----------DG----------LGKLGKIS 402

Query: 618 GGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              K+V+ M  +   P   T+  ++  LC+   +  AI
Sbjct: 403 CVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAI 440



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 88/160 (55%), Gaps = 7/160 (4%)

Query: 144 MVDEFHCKR---TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
           +VDE H +     + ++NS+L+ + +     +A+     + N K   I P+  T+ ++IK
Sbjct: 407 LVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIAL---LTNLKDQGIRPDMYTYTVLIK 463

Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            +C+ G +++A ++F ++ V+    D+YTY  ++ G C +   D A+ LL +M+ +GC P
Sbjct: 464 GLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIP 523

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
              T+ ++I  L +  E   A KL+  M  +G L +E +Y
Sbjct: 524 NAKTYEIVILSLFEKDENDMAEKLLREMIARGLL-DEKSY 562


>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
          Length = 696

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 232/486 (47%), Gaps = 29/486 (5%)

Query: 173 ALEFYNH--IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
            L  Y H   V    + + P+T  +N +I    R G VD A   F++MP   C PD +TY
Sbjct: 167 GLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTY 226

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +L+ G+C+   +DEAV L+ +M+ +G  P   T+ +L++G C  G +  A +++D M  
Sbjct: 227 NSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKE 286

Query: 291 KGCLPNEVTYNTLIHGL--CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
           KG  P+E TY TL+HG+  CL+   DKA  +L   +  +   +     T++  L K   A
Sbjct: 287 KGVAPSEATYRTLVHGVFRCLE--RDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMA 344

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +       M  R + ++   +  ++S   K  +  D  +L    ++ G  P   VY  +
Sbjct: 345 KEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMV 404

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I  L       +A   L  M+  G  ++  +Y+ ++  F ++G   KA EI K+M     
Sbjct: 405 IKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGF 464

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           + N V ++ LI G  + G +  A++V   ++  G  PD++ ++S+I GLCN   +++A  
Sbjct: 465 LPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFV 524

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            F EM   E   +P+  TYN+L++ LC   +++ +IDLLN M   G  PD  +       
Sbjct: 525 CFEEM--AEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYS------- 575

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                          N L +   + ++      I   M++  + P + T+  +++ LC  
Sbjct: 576 --------------FNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDE 621

Query: 649 KRIQAA 654
           +R+  A
Sbjct: 622 RRVNKA 627



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 121/524 (23%), Positives = 218/524 (41%), Gaps = 46/524 (8%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +L++ +   G  +    V  +M R         +  +  A  +A  V+ A   F  M  +
Sbjct: 158 ALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPAD 217

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
             C+    ++NS+++ + + G+   A+     +   +   I PN  T+ +++   C  G 
Sbjct: 218 -GCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQM---EGEGIRPNVFTYTMLVDGFCNAGR 273

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDG------------------------------- 236
           V+ A ++  +M  +   P   TY TL+ G                               
Sbjct: 274 VEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHT 333

Query: 237 ----LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
               L K++   EAV     M   G       F ++++   K  E+    +L+D+    G
Sbjct: 334 MLYCLSKKDMAKEAVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNG 393

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P    Y  +I  L    N  KA   L  MV    + + ++Y  +I+  VK G      
Sbjct: 394 GNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAE 453

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            ++  M+++ F  N   ++TLISG  K G   +A  + K +ME G  P+ + +++LIDGL
Sbjct: 454 EIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGL 513

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   + D+A     EM   G   NA TY+ LM     +G  +KA+++   M  +    + 
Sbjct: 514 CNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDA 573

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF-- 530
             ++ LI   C   K+ +A  ++  M+  G  PD   Y+S+I  LC+   V +A ++   
Sbjct: 574 YSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFA 633

Query: 531 -NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
                C    +Q    +Y  ++ AL K    S + +L++  + R
Sbjct: 634 RERSGCSTSNNQ----SYWPIVAALAKMGQFSEAGELMDKYLSR 673



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 2/238 (0%)

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++  L + G  V   R++  +      V+E +   L+    + G A  A +++ QM   
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G +P+T VY+ALI    R G  D A     +M  +GC  + FTY+SL+ G    G   +A
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEA 242

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           V + + M       N   Y++L+ G C  G++ EA  +  +M  +G  P    Y +++HG
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHG 302

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           +      ++A ++ ++ L  E    P     + +L  L K+     +++    M  RG
Sbjct: 303 VFRCLERDKAYRMLSDWLGHETSLHPS--ACHTMLYCLSKKDMAKEAVEFAKRMSARG 358



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 128/292 (43%), Gaps = 5/292 (1%)

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            L+  L  +G +  +  L+  +    C  +E     ++    +LG A     V + M   
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               +  +Y+ LI+   + G  + A   ++QM   GC+P+   Y++L+ G+CR G  DEA
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEA 242

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             ++ +M   G   N FTY+ L+ GF  +G+  +A  +   M +     +E  Y  L+HG
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHG 302

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           +    +  +A  + +  L         A  +M++ L      +EA++    M        
Sbjct: 303 VFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRMSAR--GYL 360

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
            D   + I+++   K   +S   +LL+S +  G +P     ++++  +K  L
Sbjct: 361 LDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGF---DVYIMVIKSLL 409



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 8/232 (3%)

Query: 368 YIYSTLISGLFKEGKAED----AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
           ++   L +   +EG  E      + +W          +  V  AL+  L R G    +  
Sbjct: 80  FVVRALRAAAEREGVGEPLLCVRLYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGR 139

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++ E+   GC  +     +L++ +   G    A E++  M +     +   Y+ LI    
Sbjct: 140 LVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASV 199

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QP 542
             G +  A + + QM + GC+PD   Y+S++HG+C  G V+EA++L  +M   E +  +P
Sbjct: 200 RAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQM---EGEGIRP 256

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
           +VFTY +L++  C    +  +  +L+ M ++G  P   T    +  +   LE
Sbjct: 257 NVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLE 308


>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g18475-like [Vitis vinifera]
          Length = 513

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 137/515 (26%), Positives = 256/515 (49%), Gaps = 48/515 (9%)

Query: 26  SLTTIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDST 85
           + T +   +  +F S  SA++  K+ ET+PQ         + EIFN   +   +   ++T
Sbjct: 45  TTTMVEPRKKPKFISHESAINLIKR-ETDPQR--------ALEIFNRVAEQRGFSHNNAT 95

Query: 86  FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
           + +++   A S  F++++ VL++M  E     E  F+ + K + K  L E  + +F  + 
Sbjct: 96  YATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIR 155

Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
                K ++K+ ++ LN++++        +F   + + K +N+ PNT  FN+++K  C+ 
Sbjct: 156 PIVREKPSLKAISTCLNLLVESNQVDLTRKFL--LNSKKSLNLEPNTCIFNILVKHHCKN 213

Query: 206 GLVDNAIQLFREMPVRNCE-PDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPV 263
           G +D+A ++  EM   +   P++ TY TL++GLC   RL EA+ L +EM   D   P  +
Sbjct: 214 GDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDAL 273

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+N LING C   ++ RA K+++ M   GC PN   Y+ L++G C +G L++A  + D M
Sbjct: 274 TYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEM 333

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
            +    P+ V Y T+IN   + GR  +   +L  M E K   +   ++ ++ GL +EG+ 
Sbjct: 334 KSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRF 393

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           E+A  + +++  +G   N   Y  +++ LCR G+  +A +++  M+  G   +  T + L
Sbjct: 394 EEARGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNEL 453

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
                                             L+H LCE GK+ +A M    +L  G 
Sbjct: 454 ----------------------------------LVH-LCEAGKVGDAVMALLGLLELGF 478

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
           KP+  +++ ++  +C    +  A +L ++++  EP
Sbjct: 479 KPEPNSWALLVELICRERKLLPAFELLDDLVIQEP 513



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 234/454 (51%), Gaps = 41/454 (9%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIV--------NAKHMNILP---------------NT 192
           S  S +N+I +E    RALE +N +         NA +  IL                + 
Sbjct: 59  SHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQ 118

Query: 193 LTFNL----------VIKTVCRLGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKEN 241
           +T+            ++K   +L L +  +++F  + P+   +P +    T ++ L + N
Sbjct: 119 MTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESN 178

Query: 242 RLD-EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC-LPNEVT 299
           ++D     LL+  +     P    FN+L+   CKNG++  A ++V+ M       PN +T
Sbjct: 179 QVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLIT 238

Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGA-RVLMS 357
           Y+TLI+GLC  G L +A+ L + MV+  + +P+ +TY  +ING    G  VD A +++  
Sbjct: 239 YSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCH-GEKVDRALKIMEF 297

Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
           M++   + N + YS L++G  KEG+ E+A +++ +M   G KP+TV Y+ LI+  CR G+
Sbjct: 298 MKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGR 357

Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
            DEA E+L +M  N C A+  T++ ++ G    G+  +A  + + +       N+  Y +
Sbjct: 358 VDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRI 417

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
           +++ LC +G+L++A  +   ML RG  P     + ++  LC AG V +A+     +L L 
Sbjct: 418 VLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVMALLGLLELG 477

Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            K +P+  ++ +L+  +C++  +  + +LL+ ++
Sbjct: 478 FKPEPN--SWALLVELICRERKLLPAFELLDDLV 509



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 200/413 (48%), Gaps = 24/413 (5%)

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+  +++ L K+ +      ++  M  + C  +E  +  L+         ++ V + D 
Sbjct: 94  ATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDA 153

Query: 323 MVA-SKCMPNEVTYGTIINGLVKLGRAVDGAR--VLMSMEERKFHVNEYIYSTLISGLFK 379
           +    +  P+     T +N LV+    VD  R  +L S +      N  I++ L+    K
Sbjct: 154 IRPIVREKPSLKAISTCLNLLVE-SNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCK 212

Query: 380 EGKAEDAMKLWKQMMEKGCK-PNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANA 437
            G  + A ++ ++M +     PN + YS LI+GLC  G+  EA E+  EM++ +    +A
Sbjct: 213 NGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDA 272

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TY++L+ GF    K  +A++I + M KN C  N   YS L++G C++G+L EA+ V+ +
Sbjct: 273 LTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDE 332

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M S G KPD V Y+++I+  C AG V+EA++L  +M   E K + D  T+N++L  LC++
Sbjct: 333 MKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMR--ENKCRADTVTFNVILGGLCRE 390

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL-------------- 603
                +  +L  +   G   +  +  I L +L  + E  Q  T  +              
Sbjct: 391 GRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREGEL-QKATQLVGLMLGRGVLPHFAT 449

Query: 604 -NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            NEL + L +  +       +  +L+    P+ ++W  +V+ +CR +++  A 
Sbjct: 450 SNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAF 502



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 196/418 (46%), Gaps = 27/418 (6%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMF-LKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
           P  ++    IN + +  +  RA ++ + +   +G   N  TY T++H L          +
Sbjct: 55  PKFISHESAINLIKRETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDA 114

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLG---RAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           +L +M    C  +E  +  ++    KL    R V+    +  +   K  +     ST ++
Sbjct: 115 VLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLK--AISTCLN 172

Query: 376 GLFKEGKAEDAMK-LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
            L +  + +   K L         +PNT +++ L+   C+ G  D A E++ EM  +  +
Sbjct: 173 LLVESNQVDLTRKFLLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVS 232

Query: 435 -ANAFTYSSLMKGFFESGKGHKAVEIWKDM-AKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
             N  TYS+L+ G   SG+  +A+E++++M +K+  + + + Y+ LI+G C   K+  A 
Sbjct: 233 YPNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRAL 292

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +   M   GC P+V  YS++++G C  G +EEA ++F+EM  L  K  PD   Y  L+N
Sbjct: 293 KIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLK--PDTVGYTTLIN 350

Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEA-PQDGTDF 602
             C+   +  +++LL  M +  C  D VT N+ L  L         +  LE  P +G  +
Sbjct: 351 FFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGV-Y 409

Query: 603 LNELAIR-----LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           LN+ + R     L +        ++V +ML + + P  +T   ++  LC   ++  A+
Sbjct: 410 LNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAV 467


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 237/491 (48%), Gaps = 41/491 (8%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N+++      G +  A+  +  +   +  +ILP+ +TFN+++ ++C+ G +  A  +F
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEM---RRQSILPDVVTFNMLMGSLCKYGKIKEARDVF 347

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             M ++   PD+++Y  +++G   +  L +   L D M  DG  P   TFNVLI      
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 407

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE--- 332
           G L +A  + + M   G  PN +TY T+I  LC  G +D A+   ++M+     P++   
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 333 --------------------------------VTYGTIINGLVKLGRAVDGARVLMSMEE 360
                                           V + +IIN L KLGR +D   +      
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
              H    +YS L+ G    GK E A++++  M+  G +PN VVY  L++G C++G+ DE
Sbjct: 528 VGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDE 587

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
              +  EM+  G   +   Y+ ++ G FE+G+   A   + +M ++    N+  YS+++ 
Sbjct: 588 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 647

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
           GL ++    EA  ++ ++ +   K D++  ++MI G+     VEEA  LF  +       
Sbjct: 648 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASIS--RSGL 705

Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
            P V TY+I++  L K+  +  + D+ +SM + GC+PD    N  +  L +K E  + G 
Sbjct: 706 VPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGA 765

Query: 601 DFLNELAIRLF 611
            +L+++  R F
Sbjct: 766 -YLSKIDERNF 775



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 252/489 (51%), Gaps = 6/489 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  Y+++G +K    V   MRR+  +    +F  +  +  K   ++EA  +F TM
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTM 350

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V S+N +LN    +G      + ++ ++      I P   TFN++IK    
Sbjct: 351 AMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGD---GIAPVICTFNVLIKAYAN 406

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G++D A+ +F EM     +P++ TY T++  LC+  ++D+A+   ++M   G  P    
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LI G C +G L +A +L+  +   G   + V ++++I+ LC  G +  A ++ D  V
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTV 526

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
                P  V Y  +++G   +G+     RV  +M       N+ +Y TL++G  K G+ +
Sbjct: 527 NVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
           + + L+++M++KG KP+T++Y+ +IDGL   G+   A+    EM  +G A N  TYS ++
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 646

Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
           +G F++    +A+ ++K++   N   + +  + +I G+ +  ++ EA+ ++  +   G  
Sbjct: 647 RGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLV 706

Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
           P VV YS MI  L   G VEEA  +F+ M       +PD    N ++  L K++ I  + 
Sbjct: 707 PCVVTYSIMITNLIKEGLVEEAEDMFSSM--QNAGCEPDSRLLNHVVRELLKKNEIVRAG 764

Query: 565 DLLNSMMDR 573
             L+ + +R
Sbjct: 765 AYLSKIDER 773



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 154/546 (28%), Positives = 254/546 (46%), Gaps = 15/546 (2%)

Query: 59  AKSEQPFSDEIFNSTPKLGSYQLGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVL 117
           AK      D + + TP+LG   + D   YS L++   + G     + +L RM  E   V 
Sbjct: 159 AKRTDEALDILLHRTPELGC--VPDVFSYSILLKSLCDQGKSGQADDLL-RMMAEGGAVC 215

Query: 118 EKSFIF---IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
               +    +   + K   V +A  LF  MV        V +++SV++ + +     +A 
Sbjct: 216 SPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFV-TYSSVVHALCKARAMDKAE 274

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
            F   +VN     +LPN  T+N +I      G    A+++F+EM  ++  PD+ T+  LM
Sbjct: 275 AFLRQMVNK---GVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLM 331

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             LCK  ++ EA  + D M + G  P   ++N+++NG    G L     L D M   G  
Sbjct: 332 GSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIA 391

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P   T+N LI      G LDKA+ + + M      PN +TY T+I  L ++G+  D    
Sbjct: 392 PVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
              M ++    ++Y Y  LI G    G    A +L  ++M  G   + V++S++I+ LC+
Sbjct: 452 FNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCK 511

Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
           +G+  +A+ I    +N G    A  YS LM G+   GK  KA+ ++  M       N+V 
Sbjct: 512 LGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVV 571

Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
           Y  L++G C+ G++ E   ++ +ML +G KP  + Y+ +I GL  AG    A   F+EM 
Sbjct: 572 YGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEM- 630

Query: 535 CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEK 592
             E     +  TY+I+L  L K      +I L   +       D++T N  +  +    +
Sbjct: 631 -TESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRR 689

Query: 593 LEAPQD 598
           +E  +D
Sbjct: 690 VEEAKD 695



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 230/504 (45%), Gaps = 25/504 (4%)

Query: 171 HR---ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ-LFREMPVRNCEPD 226
           HR   AL F+  ++      +  + +  N ++K  C     D A+  L    P   C PD
Sbjct: 125 HRPELALAFFGQLLRT---GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPD 181

Query: 227 IYTYCTLMDGLCKENRLDEAVLLLDEMQVDG--CFPTPVTFNVLINGLCKNGELGRAAKL 284
           +++Y  L+  LC + +  +A  LL  M   G  C P  V +N +I+G  K G++ +A  L
Sbjct: 182 VFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDL 241

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
              M  +G  P+ VTY++++H LC    +DKA + L +MV    +PN  TY  +I G   
Sbjct: 242 FKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSS 301

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
            G+  +  RV   M  +    +   ++ L+  L K GK ++A  ++  M  KG  P+   
Sbjct: 302 TGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFS 361

Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           Y+ +++G    G   +  ++   M+ +G A    T++ L+K +   G   KA+ I+ +M 
Sbjct: 362 YNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 421

Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
            +    N + Y+ +I  LC  GK+ +A   + QM+ +G  PD  AY  +I G C  GS+ 
Sbjct: 422 DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481

Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
           +A +L +E++        D+  ++ ++N LCK   +  + ++ +  ++ G  P  V  ++
Sbjct: 482 KAKELISEIM--NNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSM 539

Query: 585 FLTA--LKEKLEAPQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVMLQKF 630
            +    L  K+E      D +    I               K  R   G  +   MLQK 
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 631 LSPQTSTWERVVQELCRPKRIQAA 654
           + P T  +  ++  L    R   A
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPA 623



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 207/396 (52%), Gaps = 9/396 (2%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-L 248
           P + T+ +++    R    + A+  F ++       DI     L+ G C+  R DEA+ +
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG--CLPNEVTYNTLIHG 306
           LL      GC P   ++++L+  LC  G+ G+A  L+  M   G  C P+ V YNT+I G
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV-LMSMEERKFHV 365
              +G+++KA  L   MV     P+ VTY ++++ L K  RA+D A   L  M  +    
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCK-ARAMDKAEAFLRQMVNKGVLP 287

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           N + Y+ LI G    G+ ++A++++K+M  +   P+ V ++ L+  LC+ GK  EA ++ 
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVF 347

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC-YSVLIHGLCE 484
             M   G   + F+Y+ ++ G+   G      +++ D+   + +   +C ++VLI     
Sbjct: 348 DTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLF-DLMLGDGIAPVICTFNVLIKAYAN 406

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
            G L +A +++ +M   G KP+V+ Y+++I  LC  G +++A++ FN+M  ++    PD 
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM--IDQGVAPDK 464

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
           + Y+ L+   C   ++  + +L++ +M+ G   D+V
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV 500



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 151/349 (43%), Gaps = 54/349 (15%)

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R      + Y+ L+    +  + E A+  + Q++  G + + ++ + L+ G C   + DE
Sbjct: 105 RVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDE 164

Query: 421 AEEILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN--CVYNEVCYSV 477
           A +IL       GC  + F+YS L+K   + GK  +A ++ + MA+    C  + V Y+ 
Sbjct: 165 ALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNT 224

Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA----------------- 520
           +I G  ++G + +A  ++ +M+ RG  PD V YSS++H LC A                 
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 521 ------------------GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
                             G  +EA+++F EM        PDV T+N+L+ +LCK   I  
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEM--RRQSILPDVVTFNMLMGSLCKYGKIKE 342

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTALKEK--LEAPQDGTDFLNELAIR--------LFK 612
           + D+ ++M  +G +PD+ + NI L     K  L    D  D +    I         L K
Sbjct: 343 ARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIK 402

Query: 613 RQRTSG----GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
                G       I   M    + P   T+  V+  LCR  ++  A+ K
Sbjct: 403 AYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEK 451



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 110/245 (44%), Gaps = 5/245 (2%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +E+A+R+F  MV        V  + +++N   + G     L  +  ++      I P+T+
Sbjct: 550 MEKALRVFDAMVSAGIEPNDV-VYGTLVNGYCKIGRIDEGLSLFREMLQK---GIKPSTI 605

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N++I  +   G    A   F EM       +  TY  ++ GL K    DEA+ L  E+
Sbjct: 606 LYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 665

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
           +        +T N +I G+ +   +  A  L  ++   G +P  VTY+ +I  L  +G +
Sbjct: 666 RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLV 725

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           ++A  +   M  + C P+      ++  L+K    V     L  ++ER F + E++ + L
Sbjct: 726 EEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSL-EHLTTML 784

Query: 374 ISGLF 378
           +  LF
Sbjct: 785 LVDLF 789


>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Cucumis sativus]
          Length = 728

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 228/455 (50%), Gaps = 16/455 (3%)

Query: 145 VDEFHCKRTVKSF---NSVLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
            D + C+   + F   N+ L +II    ++ L +RA+ F++ +     M + PN + ++ 
Sbjct: 263 ADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK---MGLSPNLINYSS 319

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-LLLDEMQVD 256
           +I  +C+ G V  A +L  EM     +P++YT+ +L+ GLCK+   + A  L L  ++ D
Sbjct: 320 MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSD 379

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P   T+  +I+G CK  +L RA  L + M  +G +PN  TY TLI G C  GN  KA
Sbjct: 380 NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKA 439

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
             L++ M      PN  TY +I++GL K GRA +  ++L +  + +   +   Y+ LIS 
Sbjct: 440 YELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISE 499

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
             K      A+    +M + G +P+  +Y+ LI   CR     ++E++  E+I  G A  
Sbjct: 500 QCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPT 559

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
             TY+S++ G+    K   AV+ ++ M+ + C  + + Y  LI GLC++ +L EAR ++ 
Sbjct: 560 KETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYD 619

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M+ +G  P  V   ++ +  C       A+ +   +       +  + T + L+  LC 
Sbjct: 620 TMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL-----NKKLWIRTVHTLIRKLCC 674

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
           +  ++ +    + ++D+  + D VT   F TA  E
Sbjct: 675 EKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIE 709



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/484 (26%), Positives = 229/484 (47%), Gaps = 28/484 (5%)

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E  + I++ ++  ++  T   N +I     + LV+ A  +F EM  R   PD  TY  ++
Sbjct: 192 EAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYII 251

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
            G C+   + EA   + EM   G      T  ++I   C+   + RA      +   G  
Sbjct: 252 VGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLS 311

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           PN + Y+++I GLC +G++ +A  LL+ MV +   PN  T+ ++I+GL K G      R+
Sbjct: 312 PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL 371

Query: 355 LMSM-EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
            + +     +  N + Y+ +ISG  KE K   A  L+++M E+G  PNT  Y+ LIDG C
Sbjct: 372 FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 431

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           + G   +A E++  M N G   N  TY+S++ G  + G+  +A ++     +N    + V
Sbjct: 432 KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGV 491

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            Y++LI   C+   + +A +   +M   G +PD+  Y+++I   C    ++++ KLF+E+
Sbjct: 492 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 551

Query: 534 --LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
             L L P  +    TY  ++   C++  +S ++     M D GC PD ++    ++    
Sbjct: 552 IKLGLAPTKE----TYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISG--- 604

Query: 592 KLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
                             L K  R     ++ + M+ K LSP   T   +  E C+ +  
Sbjct: 605 ------------------LCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDF 646

Query: 652 QAAI 655
            +A+
Sbjct: 647 ASAM 650



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 150/318 (47%), Gaps = 22/318 (6%)

Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
           ++    ++G+  +   +++ M  +   +   + + +I    +    E A  ++ +M  +G
Sbjct: 180 MVGVFAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARG 239

Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
             P++  Y  +I G CR G   EA+  + EM+  G   +  T + ++  F E    ++AV
Sbjct: 240 VYPDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV 299

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
             +  + K     N + YS +I GLC+ G +++A  +  +M+  G KP+V  ++S+IHGL
Sbjct: 300 WFFHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGL 359

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C  G  E A +LF +++      +P+V TY  +++  CK+  +S +  L   M ++G  P
Sbjct: 360 CKKGWTERAFRLFLKLI-RSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVP 418

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           +    N + T +        DG            K    S  ++++E+M  +   P T T
Sbjct: 419 N---TNTYTTLI--------DGH----------CKAGNFSKAYELMELMSNEGFFPNTCT 457

Query: 638 WERVVQELCRPKRIQAAI 655
           +  +V  LC+  R + A 
Sbjct: 458 YNSIVDGLCKRGRAEEAF 475



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 148/331 (44%), Gaps = 7/331 (2%)

Query: 78  SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
           +Y+    T+ ++I  Y         EM+  RM+ +  V    ++  +   + KA    +A
Sbjct: 380 NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKA 439

Query: 138 IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
             L   M +E     T  ++NS+++ + + G   RA E +  +       I  + +T+ +
Sbjct: 440 YELMELMSNEGFFPNTC-TYNSIVDGLCKRG---RAEEAFKLLNTGFQNQIEADGVTYTI 495

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I   C+   ++ A+    +M     +PDI+ Y TL+   C++N + ++  L DE+   G
Sbjct: 496 LISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLG 555

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             PT  T+  +I G C+  ++  A K    M   GC P+ ++Y  LI GLC +  LD+A 
Sbjct: 556 LAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEAR 615

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
            L D M+     P EVT  T+     K     D A  ++ +E     +      TLI  L
Sbjct: 616 QLYDTMIDKGLSPCEVTRVTLTYEYCK---TEDFASAMVILERLNKKLWIRTVHTLIRKL 672

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
             E K   A   + ++++K    + V  +A 
Sbjct: 673 CCEKKVALAALFFHKLLDKEVNVDRVTLAAF 703


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 154/569 (27%), Positives = 256/569 (44%), Gaps = 57/569 (10%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           +A+ LF  M  +  C    K ++ V+   ++ G++  A+  ++ +  A    + P+   +
Sbjct: 168 DALTLFDEMRGK-GCYADAKMYDVVIRACVRGGMHCDAVRLFDEMAGA---GVKPDERVY 223

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
            + I  +C+L   D A+Q+  +M     EP   TY +++D L K  R+DEA+ L D+M +
Sbjct: 224 AITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLL 283

Query: 256 -DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
             G     V   +L++G C NGE+G+A  L D +   G  P  VTY  LI G   +G  D
Sbjct: 284 ATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTD 343

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +   L  +M+    +P+   +  +I GL++  R  D   +L  + +     + + Y  LI
Sbjct: 344 ETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGVP-DVFTYGCLI 402

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
             L K  K  +A+ LW +M E G KP+ V Y +L+ G C  G+ DEA ++  EM + G  
Sbjct: 403 HWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFP 462

Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN-------------NCVY--NEVC----- 474
            N  TY++LMKG+ +      A  +  +M +N             N +Y  N VC     
Sbjct: 463 PNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEM 522

Query: 475 ---------------YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
                          Y+ +I+G  + G +  A  ++ QM  +G  P++V Y+S I G C 
Sbjct: 523 LKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCR 582

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
               + A+KL   +       QPD+  YN  ++  CKQ N+S ++  L  ++  G  PD+
Sbjct: 583 TNCCDLAVKLL--IYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDV 640

Query: 580 VTCNIFLTA---LKEKLEAPQ-----------DGTDFLNELAIRLFKRQRTSGGFKIVEV 625
              N F+T    LK   EA +             T+    L     K    +   ++   
Sbjct: 641 TVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSE 700

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           M+   + P   T+  +   LCR   I  A
Sbjct: 701 MMANHVIPDDKTFTALTHGLCRSGDIDGA 729



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 232/491 (47%), Gaps = 50/491 (10%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ----EGLYHRALEFYNHIVNAKHMNIL 189
           V +A+ LF  +V +      V   N    V+I+    EG+     +    ++      +L
Sbjct: 307 VGKALDLFDEVVSD-----GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMI---EQGLL 358

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T  FNLVIK + R     +AI L + + V    PD++TY  L+  LCK  +L EAV L
Sbjct: 359 PSTYEFNLVIKGLLRDKRWKDAIGLLK-LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNL 417

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M+  G  P+ VT++ L+ G C+ G +  A KL   M  KG  PNEVTY TL+ G   
Sbjct: 418 WDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIK 477

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           K   D A +LL+ M  +     + TY  +INGL  + R  +   +L       F      
Sbjct: 478 KKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMT 537

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+++I+G  K G    A  +++QM +KG  PN V Y++ IDG CR    D A ++L  + 
Sbjct: 538 YNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVR 597

Query: 430 NNGCAANAFTYSSLMKGFFESGK----------------------------GHK------ 455
            +G   +   Y++ +  F + G                             G+K      
Sbjct: 598 RDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMA 657

Query: 456 -AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A + +  M K   V +   Y+ LI G  + G +  A  ++++M++    PD   ++++ 
Sbjct: 658 EASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALT 717

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           HGLC +G ++ A +L ++M  L+    P++ TYN+L+NA  +   +  +  L + M+  G
Sbjct: 718 HGLCRSGDIDGAKRLLDDMRRLD--VSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSG 775

Query: 575 CDPDLVTCNIF 585
             PD  T +I 
Sbjct: 776 VVPDDTTYDIL 786



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 4/306 (1%)

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  +G +P+  +   L+    L  +   A++L D M    C  +   Y  +I   V+ G 
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             D  R+   M       +E +Y+  ISGL K   A+ A+++  +M E G +P  + YS+
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260

Query: 408 LIDGLCRVGKPDEAEEILFEM-INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
           ++D L +V + DEA  +  +M +  G   +    + LM G+  +G+  KA++++ ++  +
Sbjct: 261 VVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSD 320

Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEA 526
                 V Y VLI G   +G   E   +  QM+ +G  P    ++ +I GL      ++A
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDA 380

Query: 527 LKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           + L   ++       PDVFTY  L++ LCK   +  +++L + M + G  P +VT +  L
Sbjct: 381 IGLLKLVV---DTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 587 TALKEK 592
               EK
Sbjct: 438 LGYCEK 443


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/498 (27%), Positives = 244/498 (48%), Gaps = 8/498 (1%)

Query: 84  STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
           S+F  L+  Y     F  +E VL  +R E   +  ++   +  AY ++  + +A+ ++  
Sbjct: 103 SSFLKLLARYRI---FNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDY 159

Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
           +V+ +     V + NS+L+++++      A + Y+ + +        +  +  +++K +C
Sbjct: 160 VVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDS---VDNYSTCILVKGMC 216

Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
             G V+   +L      + C P+I  Y T++ G CK   ++ A L+  E+++ G  PT  
Sbjct: 217 NEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLE 276

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           TF  +ING CK G+   + +L+  +  +G   +    N +I      G        +  +
Sbjct: 277 TFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWI 336

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           +A+ C P+  TY  +IN L K G+       L    ++    N   Y+ LI    K  + 
Sbjct: 337 IANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEY 396

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A KL  QM E+GCKP+ V Y  LI GL   G  D+A  +  ++I+ G + +A  Y+ L
Sbjct: 397 DIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNML 456

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           M G  ++G+   A  ++ +M   N + +   Y+ LI G    G   EAR V++  + +G 
Sbjct: 457 MSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGV 516

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           K DVV +++MI G C +G ++EAL   N M   E    PD FTY+ +++   KQ +++ +
Sbjct: 517 KVDVVHHNAMIKGFCRSGMLDEALACMNRM--NEEHLVPDKFTYSTIIDGYVKQQDMATA 574

Query: 564 IDLLNSMMDRGCDPDLVT 581
           I +   M    C P++VT
Sbjct: 575 IKIFRYMEKNKCKPNVVT 592



 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/407 (29%), Positives = 211/407 (51%), Gaps = 4/407 (0%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           T+++F +++N   +EG +  +    + +   K   +  +    N +I    R G   +  
Sbjct: 274 TLETFGTMINGFCKEGDFVASDRLLSEV---KERGLRVSVWFLNNIIDAKYRHGYKVDPA 330

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
           +    +   +C+PD+ TY  L++ LCKE + + AV  LDE    G  P  +++  LI   
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK+ E   A+KL+  M  +GC P+ VTY  LIHGL + G++D AV++  +++     P+ 
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
             Y  +++GL K GR +    +   M +R    + Y+Y+TLI G  + G  ++A K++  
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
            +EKG K + V ++A+I G CR G  DEA   +  M       + FTYS+++ G+ +   
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A++I++ M KN C  N V Y+ LI+G C  G  + A   + +M  R   P+VV Y++
Sbjct: 571 MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTT 630

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           +I  L    S  E    + E++ +  K  P+  T+N LL    K+++
Sbjct: 631 LIRSLAKESSTLEKAVYYWELM-MTNKCVPNEVTFNCLLQGFVKKTS 676



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 143/551 (25%), Positives = 244/551 (44%), Gaps = 58/551 (10%)

Query: 75  KLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMR-REKRVVLEKSFIFIFKAYGKAHL 133
           KL  +     TF ++I  +   GDF + + +L  ++ R  RV +      I   Y   + 
Sbjct: 267 KLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYK 326

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V+ A  +   + ++  CK  V ++N ++N + +EG    A+ F +    A    ++PN L
Sbjct: 327 VDPAESIGWIIAND--CKPDVATYNILINRLCKEGKKEVAVGFLDE---ASKKGLIPNNL 381

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           ++  +I+  C+    D A +L  +M  R C+PDI TY  L+ GL     +D+AV +  ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
              G  P    +N+L++GLCK G    A  L   M  +  LP+   Y TLI G    G+ 
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDF 501

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A  +    V      + V +  +I G  + G   +    +  M E     +++ YST+
Sbjct: 502 DEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I G  K+     A+K+++ M +  CKPN V Y++LI+G C  G    AEE   EM     
Sbjct: 562 IDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDL 621

Query: 434 AANAFTYSSLMKGFF-ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG----------- 481
             N  TY++L++    ES    KAV  W+ M  N CV NEV ++ L+ G           
Sbjct: 622 VPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLA 681

Query: 482 --------------------------------------LCEDGKLREARMVWTQMLSRGC 503
                                                 LC  G ++ A M   +M+ +G 
Sbjct: 682 EPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGF 741

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            PD V++++++HG C  G+ ++   +  +   L  K       Y+ +L     Q  I  +
Sbjct: 742 SPDPVSFAAILHGFCVVGNSKQWRNM--DFCNLGEKGLEVAVRYSQVLEQHLPQPVICEA 799

Query: 564 IDLLNSMMDRG 574
             +L++M+++ 
Sbjct: 800 STILHAMVEKA 810



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 150/324 (46%), Gaps = 40/324 (12%)

Query: 303 LIHGLCLKGNLDKAVSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           ++H     G+L KAV + D +V     +P+ +   ++++ LVK  R  D  +V   M +R
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
              V+ Y    L+ G+  EGK E   KL +    KGC PN V Y+ +I G C++G  + A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESG--------------KGHKAVEIW------- 460
             +  E+   G      T+ +++ GF + G              +G + V +W       
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLR-VSVWFLNNIID 318

Query: 461 --------KDMAK-------NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
                    D A+       N+C  +   Y++LI+ LC++GK   A     +   +G  P
Sbjct: 319 AKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           + ++Y+ +I   C +   + A KL  +M   E   +PD+ TY IL++ L    ++  +++
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMA--ERGCKPDIVTYGILIHGLVVSGHMDDAVN 436

Query: 566 LLNSMMDRGCDPDLVTCNIFLTAL 589
           +   ++DRG  PD    N+ ++ L
Sbjct: 437 MKVKLIDRGVSPDAAIYNMLMSGL 460



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 40/211 (18%)

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           N    S+ +  L R    +E E++L  + N          S ++  + ESG   KAVEI+
Sbjct: 98  NGFACSSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIY 157

Query: 461 --------------------------KDMAKNNCVYNEVC--------YS--VLIHGLCE 484
                                     + +     VY+E+C        YS  +L+ G+C 
Sbjct: 158 DYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCN 217

Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPD 543
           +GK+   R +      +GC P++V Y+++I G C  G +E A  +F E   L+ K   P 
Sbjct: 218 EGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE---LKLKGFMPT 274

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           + T+  ++N  CK+ +   S  LL+ + +RG
Sbjct: 275 LETFGTMINGFCKEGDFVASDRLLSEVKERG 305


>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 696

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 232/486 (47%), Gaps = 29/486 (5%)

Query: 173 ALEFYNH--IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
            L  Y H   V    + + P+T  +N +I    R G VD A   F++MP   C PD +TY
Sbjct: 167 GLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTY 226

Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
            +L+ G+C+   +DEAV L+ +M+ +G  P   T+ +L++G C  G +  A +++D M  
Sbjct: 227 NSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKE 286

Query: 291 KGCLPNEVTYNTLIHGL--CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
           KG  P+E TY TL+HG+  CL+   DKA  +L   +  +   +     T++  L K   A
Sbjct: 287 KGVAPSEATYRTLVHGVFRCLE--RDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMA 344

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +       M  R + ++   +  ++S   K  +  D  +L    ++ G  P   VY  +
Sbjct: 345 KEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMV 404

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           I  L       +A   L  M+  G  ++  +Y+ ++  F ++G   KA EI K+M     
Sbjct: 405 IKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKEMQDKGF 464

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
           + N V ++ LI G  + G +  A++V   ++  G  PD++ ++S+I GLCN   +++A  
Sbjct: 465 LPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQLDDAFV 524

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
            F EM   E   +P+  TYN+L++ LC   +++ +IDLLN M   G  PD  +       
Sbjct: 525 CFEEM--AEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYS------- 575

Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
                          N L +   + ++      I   M++  + P + T+  +++ LC  
Sbjct: 576 --------------FNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDE 621

Query: 649 KRIQAA 654
           +R+  A
Sbjct: 622 RRVNKA 627



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 121/524 (23%), Positives = 218/524 (41%), Gaps = 46/524 (8%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +L++ +   G  +    V  +M R         +  +  A  +A  V+ A   F  M  +
Sbjct: 158 ALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPAD 217

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
             C+    ++NS+++ + + G+   A+     +   +   I PN  T+ +++   C  G 
Sbjct: 218 -GCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQM---EGEGIRPNVFTYTMLVDGFCNAGR 273

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDG------------------------------- 236
           V+ A ++  +M  +   P   TY TL+ G                               
Sbjct: 274 VEEAFRMLDKMKEKGVAPSEATYRTLVHGVFRCLERDKAYRMLSDWLGHETSLHPSACHT 333

Query: 237 ----LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
               L K++   EAV     M   G       F ++++   K  E+    +L+D+    G
Sbjct: 334 MLYCLSKKDMAKEAVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNG 393

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             P    Y  +I  L    N  KA   L  MV    + + ++Y  +I+  VK G      
Sbjct: 394 GNPGFDVYIMVIKSLLNCKNFSKANHYLGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAE 453

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
            ++  M+++ F  N   ++TLISG  K G   +A  + K +ME G  P+ + +++LIDGL
Sbjct: 454 EIVKEMQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGL 513

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
           C   + D+A     EM   G   NA TY+ LM     +G  +KA+++   M  +    + 
Sbjct: 514 CNTHQLDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDA 573

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF-- 530
             ++ LI   C   K+ +A  ++  M+  G  PD   Y+S+I  LC+   V +A ++   
Sbjct: 574 YSFNALILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFA 633

Query: 531 -NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
                C    +Q    +Y  ++ AL K    S + +L++  + R
Sbjct: 634 RERSGCSTSNNQ----SYWPIVAALAKMGQFSEAGELMDKYLSR 673



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 132/296 (44%), Gaps = 8/296 (2%)

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            ++  L + G  V   R++  +      V+E +   L+    + G A  A +++ QM   
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G +P+T VY+ALI    R G  D A     +M  +GC  + FTY+SL+ G    G   +A
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEA 242

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
           V + + M       N   Y++L+ G C  G++ EA  +  +M  +G  P    Y +++HG
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHG 302

Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
           +      ++A ++ ++ L  E    P     + +L  L K+     +++    M  RG  
Sbjct: 303 VFRCLERDKAYRMLSDWLGHETSLHPS--ACHTMLYCLSKKDMAKEAVEFEKRMSARGYL 360

Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
            D     I ++   + LE   D  + L+      F +   + GF +  ++++  L+
Sbjct: 361 LDSTAFGIVMSCALKCLEV-SDLCELLDS-----FIKNGGNPGFDVYIMVIKSLLN 410



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 128/292 (43%), Gaps = 5/292 (1%)

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
            L+  L  +G +  +  L+  +    C  +E     ++    +LG A     V + M   
Sbjct: 123 ALVGALWRRGPVVLSGRLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRL 182

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               +  +Y+ LI+   + G  + A   ++QM   GC+P+   Y++L+ G+CR G  DEA
Sbjct: 183 GLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEA 242

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
             ++ +M   G   N FTY+ L+ GF  +G+  +A  +   M +     +E  Y  L+HG
Sbjct: 243 VRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVHG 302

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
           +    +  +A  + +  L         A  +M++ L      +EA++    M        
Sbjct: 303 VFRCLERDKAYRMLSDWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSAR--GYL 360

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
            D   + I+++   K   +S   +LL+S +  G +P     ++++  +K  L
Sbjct: 361 LDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGF---DVYIMVIKSLL 409



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 8/219 (3%)

Query: 368 YIYSTLISGLFKEGKAED----AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
           ++   L +   +EG  E      + +W          +  V  AL+  L R G    +  
Sbjct: 80  FVVRALRAAAEREGLGEPLLCVRLYVWASRFGAHFARDGGVRRALVGALWRRGPVVLSGR 139

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++ E+   GC  +     +L++ +   G    A E++  M +     +   Y+ LI    
Sbjct: 140 LVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAASV 199

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QP 542
             G +  A + + QM + GC+PD   Y+S++HG+C  G V+EA++L  +M   E +  +P
Sbjct: 200 RAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQM---EGEGIRP 256

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           +VFTY +L++  C    +  +  +L+ M ++G  P   T
Sbjct: 257 NVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEAT 295


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/432 (29%), Positives = 205/432 (47%), Gaps = 37/432 (8%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  TFNL+I   CR G       L   M    CEPD+Y+Y  +++  C + +   A+ L
Sbjct: 255 PNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHL 314

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L+ M  +GC P+  TF  +I+  CK G +  A K  D +   G   N + YN +I G   
Sbjct: 315 LNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVK 374

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
             ++ +A  L + M     +P+ +T+ T++ G  + G+  DG R+L  +       +  +
Sbjct: 375 ARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSL 434

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY------------------------ 405
               ++GL   G+ ++AMKL + ++EKG  P+ V +                        
Sbjct: 435 CDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMV 494

Query: 406 -----------SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
                      S+L+  L R G  DEA   L++MI+ G       ++ L+ G+F  G  +
Sbjct: 495 KFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVN 554

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
            A  +W +M       + V ++  I+GLC  G + +A  V++ ML +G  P+   Y+S+I
Sbjct: 555 MAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLI 614

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            G C  G + EALKL  EM   +    PD+FT N+++  LCKQ  +  +I+    M   G
Sbjct: 615 GGFCKVGKLNEALKLVREM--NKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMG 672

Query: 575 CDPDLVTCNIFL 586
             PD+VT N  +
Sbjct: 673 LSPDIVTYNTLI 684



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 232/453 (51%), Gaps = 6/453 (1%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+ L + M+ E  CK ++ +F ++++   +EG    A ++++ I   + M +  NT+ +N
Sbjct: 311 ALHLLNLMI-ENGCKPSIATFCTIIDAFCKEGNVELARKYFDEI---EDMGLSQNTIVYN 366

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           ++I    +   +  A  LF EM  ++  PD  T+ TL+ G  +  + ++   LL ++ V 
Sbjct: 367 IMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVS 426

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G        +V + GLC  G    A KL++N+  KG  P+ V +N++I      G  ++A
Sbjct: 427 GLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERA 486

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
                 MV     P+  T  +++  LV+ G   +    L  M ++ F V    ++ L+ G
Sbjct: 487 FYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDG 546

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
            F+ G    A  LW +M  +G  P+ V ++A I+GLC  G   +A ++  +M+  G   N
Sbjct: 547 YFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPN 606

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            F Y+SL+ GF + GK ++A+++ ++M K   + +    +++I GLC+ G+++ A   + 
Sbjct: 607 NFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFM 666

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M   G  PD+V Y+++I G C A  V  A  L  +M   +   +PD+ TYNI ++  C 
Sbjct: 667 DMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKM--SDSGWEPDLTTYNIRIHGYCT 724

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              I+ ++ +L  ++  G  P+ VT N  + A+
Sbjct: 725 VRKINRAVMILEELISVGIVPNTVTYNTMINAV 757



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 221/480 (46%), Gaps = 26/480 (5%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKR 114
           +GN +  + + DEI      +G  Q  ++  Y+ +I  Y  + D     ++   MR +  
Sbjct: 340 EGNVELARKYFDEI----EDMGLSQ--NTIVYNIMISGYVKARDISQANLLFEEMRTKDI 393

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV------DEFHCKRTVKSFNSVLNVIIQEG 168
           V    +F  +   + +    E+  RL   +       D   C  TV         +   G
Sbjct: 394 VPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAG-------LCWAG 446

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
            Y  A++   +++      I P+ + FN +I      GL + A   +  M      P   
Sbjct: 447 RYDEAMKLLENLLEK---GIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSS 503

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP-TPVTFNVLINGLCKNGELGRAAKLVDN 287
           T  +L+  L ++  LDEA + L +M +D  FP T + F VL++G  + G +  A  L + 
Sbjct: 504 TCSSLLISLVRKGSLDEAWIALYDM-IDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNE 562

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  +G  P+ V +   I+GLC+ G +  A  +   M+    +PN   Y ++I G  K+G+
Sbjct: 563 MKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGK 622

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +  +++  M +R    + +  + +I GL K+G+ + A++ +  M   G  P+ V Y+ 
Sbjct: 623 LNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNT 682

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LIDG C+      A++++ +M ++G   +  TY+  + G+    K ++AV I +++    
Sbjct: 683 LIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG 742

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            V N V Y+ +I+ +C +  L  A ++  ++L     P+ V  + ++   C  G  E+A+
Sbjct: 743 IVPNTVTYNTMINAVC-NVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI 801



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 227/504 (45%), Gaps = 38/504 (7%)

Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
           ++++   ++  ++  ALE  + +   + + + PN    +++ + + R G      +LF +
Sbjct: 191 DTLMQAFVKSEMHFEALEILSKM---REVGVTPNPSAISILFRLLIRAGDCGAVWKLFGD 247

Query: 218 MPVRNCEPDIYTYCTLMDGLCKE--NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           +  +   P+ +T+  L+   C++   R+ EA  LL  M    C P   ++N++IN  C  
Sbjct: 248 VVRKGPCPNNFTFNLLILEFCRKGWTRIGEA--LLHVMGKFRCEPDVYSYNIVINANCLK 305

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+   A  L++ M   GC P+  T+ T+I   C +GN++ A    D +       N + Y
Sbjct: 306 GQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVY 365

Query: 336 GTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
             +I+G VK  R +  A +L   M  +    +   ++TL++G ++ GK ED  +L + + 
Sbjct: 366 NIMISGYVK-ARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLS 424

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
             G   ++ +    + GLC  G+ DEA ++L  ++  G   +   ++S++  +  +G   
Sbjct: 425 VSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEE 484

Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
           +A   +  M K     +    S L+  L   G L EA +    M+ +G     +A++ ++
Sbjct: 485 RAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLL 544

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSMM 571
            G    G+V  A  L+NEM     K +   PD   +   +N LC    ++ + D+ + M+
Sbjct: 545 DGYFRIGAVNMAESLWNEM-----KGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDML 599

Query: 572 DRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFL 631
            +G  P     N F+                 N L     K  + +   K+V  M ++ L
Sbjct: 600 RKGFVP-----NNFV----------------YNSLIGGFCKVGKLNEALKLVREMNKRGL 638

Query: 632 SPQTSTWERVVQELCRPKRIQAAI 655
            P   T   ++  LC+  R++ AI
Sbjct: 639 LPDIFTVNMIICGLCKQGRMKLAI 662



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 193/451 (42%), Gaps = 20/451 (4%)

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           R  E D     TLM    K     EA+ +L +M+  G  P P   ++L   L + G+ G 
Sbjct: 181 RVYESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGA 240

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
             KL  ++  KG  PN  T+N LI   C KG      +LL  M   +C P+  +Y  +IN
Sbjct: 241 VWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIN 300

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
                G++     +L  M E     +   + T+I    KEG  E A K + ++ + G   
Sbjct: 301 ANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQ 360

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           NT+VY+ +I G  +     +A  +  EM       +  T+++L+ G +  GK      + 
Sbjct: 361 NTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLL 420

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           +D++ +  +++     V + GLC  G+  EA  +   +L +G  P VVA++S+I    NA
Sbjct: 421 RDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNA 480

Query: 521 GSVEEALKLFNEML--CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           G  E A   +  M+   L P S     T + LL +L ++ ++  +   L  M+D+G    
Sbjct: 481 GLEERAFYAYGIMVKFGLTPSSS----TCSSLLISLVRKGSLDEAWIALYDMIDKGFPVT 536

Query: 579 LVTCNIFLTA--------LKEKLEAPQDGTD-FLNELAIRLFKRQRTSGG-----FKIVE 624
            +   + L          + E L     G   F + +A   F       G     + +  
Sbjct: 537 NMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFS 596

Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
            ML+K   P    +  ++   C+  ++  A+
Sbjct: 597 DMLRKGFVPNNFVYNSLIGGFCKVGKLNEAL 627


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/423 (29%), Positives = 213/423 (50%), Gaps = 5/423 (1%)

Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
            ++E  I     + DE    R   S  S +   + EG   +A EF   +   + +   PN
Sbjct: 151 QVMETRIATNRELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFM---EGLGFKPN 207

Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
            +++N +I      G ++ A ++   M V+  EPD YTY +L+ G+CKE RL+EA  L D
Sbjct: 208 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 267

Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
           +M   G  P  VT+N LI+G C  G+L RA    D M  KG +P+  TYN L+H L ++G
Sbjct: 268 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG 327

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            + +A  ++  M     +P+ +TY  +ING  + G A     +   M  +        Y+
Sbjct: 328 RMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYT 387

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           +LI  L +  + ++A  L+++++++G  P+ ++++A+IDG C  G  + A  +L EM   
Sbjct: 388 SLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRK 447

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
               +  T+++LM+G    GK  +A  +  +M       + + Y+ LI G    G +++A
Sbjct: 448 SVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDA 507

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             V  +MLS G  P ++ Y+++I  LC     + A +L  EM  +     PD  TY  L+
Sbjct: 508 FXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM--VNKGISPDDSTYLSLI 565

Query: 552 NAL 554
             +
Sbjct: 566 EGM 568



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 215/460 (46%), Gaps = 52/460 (11%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR--LDEAVL 248
           +T ++ L +  + RL     A+QL ++               +M+     NR   DE  L
Sbjct: 125 DTKSYCLAVVLLARLPSPKLALQLLKQ---------------VMETRIATNRELFDELTL 169

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
             D + V     + + F++L       G+L +A + +  M   G  PN V+YNT+IHG  
Sbjct: 170 SRDRLSVK----SSIVFDLL------EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 219

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
            +GN++ A  +LD M      P+  TYG++I+G+ K GR  + + +   M E     N  
Sbjct: 220 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 279

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            Y+TLI G   +G  E A     +M++KG  P+   Y+ L+  L   G+  EA++++ EM
Sbjct: 280 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 339

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G   +A TY+ L+ G+   G   +A ++  +M         V Y+ LI+ L    ++
Sbjct: 340 RKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 399

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTY 547
           +EA  ++ ++L +G  PDV+ +++MI G C  G+VE A  L  EM   + KS  PD  T+
Sbjct: 400 KEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEM---DRKSVPPDEVTF 456

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
           N L+   C++  +  +  LL+ M  RG  PD ++ N  ++                    
Sbjct: 457 NTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYG----------------- 499

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
               +R      F + + ML    +P   T+  +++ LC+
Sbjct: 500 ----RRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCK 535



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 129/289 (44%), Gaps = 16/289 (5%)

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           EGK + A +    M   G KPN V Y+ +I G    G  + A  IL  M   G   +++T
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y SL+ G  + G+  +A  ++  M +   V N V Y+ LI G C  G L  A     +M+
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            +G  P V  Y+ ++H L   G + EA  +  EM   +    PD  TYNIL+N   +  N
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR--KKGIIPDAITYNILINGYSRCGN 363

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCN--IFLTALKEKLEAPQD------------GTDFLNE 605
              + DL N M+ +G +P  VT    I++ + + +++   D                 N 
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +             F +++ M +K + P   T+  ++Q  CR  +++ A
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 472


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 210/435 (48%), Gaps = 37/435 (8%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  ++N+VI  + R G   +A+++F EM  R   P+  TY T++DG  K   L+    L
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M   G  P  +T+NVL++GLC+ G +G  + L+D M  +  +P+  TY+ L  GL  
Sbjct: 121 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 180

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+    +SL  + + +     + T   ++NGL K G+      VL S+          I
Sbjct: 181 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 240

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  + G+ E A   + QM  +  KP+ + Y+ALI+GLC+  +   A+++L EM 
Sbjct: 241 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 300

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +NG      T+++L+  +  +G+  K   +  +M +N    N V Y  +++  C++GK+ 
Sbjct: 301 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 360

Query: 490 EARMVWTQML-----------------------------------SRGCKPDVVAYSSMI 514
           EA  +   M                                    S G  P +V Y+ +I
Sbjct: 361 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 420

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GLCN   + EA ++ N +     +  PD  +YN L++A C + NI  ++DL   M   G
Sbjct: 421 KGLCNQSQISEAEEIINSLS--NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 478

Query: 575 CDPDLVTCNIFLTAL 589
               + T +  ++ L
Sbjct: 479 IKSTVRTYHQLISGL 493



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 237/500 (47%), Gaps = 7/500 (1%)

Query: 90  IQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           +Q    +GD      +L RM R+        S+  +     +A    +A+ +F  M +  
Sbjct: 34  VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 93

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
                + ++N++++  I+ G         + +V      + PN +T+N+++  +CR G +
Sbjct: 94  VLPNHI-TYNTMIDGHIKGGDLEAGFRLRDQMV---CHGLKPNAITYNVLLSGLCRAGRM 149

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
                L  EM  +   PD +TY  L DGL +       + L  +   +G      T ++L
Sbjct: 150 GETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSIL 209

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           +NGLCK+G++  A +++ ++   G +P  V YNTLI+G C  G L+ A S   +M +   
Sbjct: 210 LNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHI 269

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+ +TY  +INGL K  R  +   +LM M++   +     ++TLI    + G+ E    
Sbjct: 270 KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 329

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           +  +M E G KPN V Y ++++  C+ GK  EA  IL +M +     NA  Y++++  + 
Sbjct: 330 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 389

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           E G   +A  + + M  N    + V Y++LI GLC   ++ EA  +   + +    PD V
Sbjct: 390 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 449

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +Y+++I   C  G++++AL L   M     KS   V TY+ L++ L     ++    L  
Sbjct: 450 SYNTLISACCYRGNIDKALDLQQRMHKYGIKST--VRTYHQLISGLGGAGRLNEMEYLYQ 507

Query: 569 SMMDRGCDPDLVTCNIFLTA 588
            MM     P     NI + A
Sbjct: 508 KMMQNNVVPSNAIHNIMVEA 527



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 211/451 (46%), Gaps = 24/451 (5%)

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP-TPV 263
           LG   +  + F  +      PD + +   +        L EAV +L  M  DG  P    
Sbjct: 5   LGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAF 64

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           ++NV+I G+ + G  G A ++ D M  +  LPN +TYNT+I G    G+L+    L D+M
Sbjct: 65  SYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM 124

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V     PN +TY  +++GL + GR  + + +L  M  +K   + + YS L  GL + G +
Sbjct: 125 VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 184

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +  + L+ + ++ G        S L++GLC+ GK   AEE+L  ++N G       Y++L
Sbjct: 185 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 244

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G+ ++G+   A   +  M   +   + + Y+ LI+GLC+  ++  A+ +  +M   G 
Sbjct: 245 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 304

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
            P V  ++++I      G +E+   + +EM   E   +P+V +Y  ++NA CK   I  +
Sbjct: 305 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ--ENGLKPNVVSYGSIVNAFCKNGKIPEA 362

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
           + +L+ M  +   P+    N  + A  E    P D                     F +V
Sbjct: 363 VAILDDMFHKDVLPNAQVYNAIIDAYVE--HGPNDQA-------------------FILV 401

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           E M    +SP   T+  +++ LC   +I  A
Sbjct: 402 EKMKSNGISPSIVTYNLLIKGLCNQSQISEA 432



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 172/375 (45%), Gaps = 38/375 (10%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +LN + ++G    A E    +VNA    ++P  + +N +I   C+ G ++ A   F +M 
Sbjct: 209 LLNGLCKDGKVSIAEEVLQSLVNA---GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 265

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
            R+ +PD  TY  L++GLCK  R+  A  LL EMQ +G  PT  TFN LI+   + G+L 
Sbjct: 266 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 325

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           +   ++  M   G  PN V+Y ++++  C  G + +AV++LD M     +PN   Y  II
Sbjct: 326 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 385

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +  V                                   + G  + A  L ++M   G  
Sbjct: 386 DAYV-----------------------------------EHGPNDQAFILVEKMKSNGIS 410

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+ V Y+ LI GLC   +  EAEEI+  + N+    +A +Y++L+      G   KA+++
Sbjct: 411 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 470

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            + M K         Y  LI GL   G+L E   ++ +M+     P    ++ M+     
Sbjct: 471 QQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 530

Query: 520 AGSVEEALKLFNEML 534
            G+  +A  L  EML
Sbjct: 531 YGNEIKAEDLRKEML 545



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 4/278 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI     +    + + +L  M+        ++F  +  AYG+   +E+   +   M
Sbjct: 275 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 334

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E   K  V S+ S++N   + G    A+   + +    H ++LPN   +N +I     
Sbjct: 335 -QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF---HKDVLPNAQVYNAIIDAYVE 390

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G  D A  L  +M      P I TY  L+ GLC ++++ EA  +++ +      P  V+
Sbjct: 391 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 450

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+  C  G + +A  L   M   G      TY+ LI GL   G L++   L  +M+
Sbjct: 451 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 510

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
            +  +P+   +  ++    K G  +    +   M +++
Sbjct: 511 QNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 548



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 86/179 (48%), Gaps = 3/179 (1%)

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY- 470
           L  +G+  +       + + G   + F ++  ++    +G   +AV + + M ++     
Sbjct: 2   LLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           N   Y+V+I G+   G+  +A  V+ +M  R   P+ + Y++MI G    G +E   +L 
Sbjct: 62  NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           ++M+C   K  P+  TYN+LL+ LC+   +  +  LL+ M  +   PD  T +I    L
Sbjct: 122 DQMVCHGLK--PNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGL 178


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 206/402 (51%), Gaps = 18/402 (4%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY-----------------CT 232
           P+  T N++   +C L  V   +     +  R   PDI TY                 C 
Sbjct: 8   PDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCI 67

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
           ++DGLCK    DEA  + +EM+  G  P  ++++ L++G C  G+L  + +L + M  +G
Sbjct: 68  IIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQG 127

Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
             PN V +N LI  LC +G + +A  LL+  +    + + VTY ++I+G  K+G      
Sbjct: 128 VQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSAR 187

Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
           ++ +SM  +    NE  Y+ LI+G  K  K E+AM L+ +M + G +PN   YS L+ GL
Sbjct: 188 KLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGL 247

Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
            + GK  +A ++   M  +G + ++  Y   + G  ++G   +A+E++ ++   N   + 
Sbjct: 248 LQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDF 307

Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
             YS LI GLC+ GK+  A   + Q+   G +P+VV  + MIHG C    V++A  LF +
Sbjct: 308 ESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEK 367

Query: 533 MLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           M  +E     PD+ TYN LL   C+ + +   ++LL+ M  R
Sbjct: 368 MEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 212/420 (50%), Gaps = 31/420 (7%)

Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL--------- 268
           M +    PD++T   L + LC  NR+ E +  +  +   G  P  VT+N L         
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 269 --------INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
                   I+GLCK G    A ++ + M  +G +PN ++Y++L+HG C  G L+++  L 
Sbjct: 61  ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           + MV     PN V +  +I+ L K G+ ++  ++L    +R   ++   Y++LI G  K 
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKI 180

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
           G    A KL+  M  KGC+ N + Y+ LI+G C++ K +EA  +  EM   G   N  TY
Sbjct: 181 GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTY 240

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           S+L+ G  ++GK   A +++  M  +    +   Y + + GLC++G L EA  ++ ++ S
Sbjct: 241 STLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKS 300

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
              K D  +YS +I GLC AG VE A + F ++   +   QP+V T NI+++  C+   +
Sbjct: 301 YNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQL--SQEGLQPNVVTCNIMIHGFCRVEQV 358

Query: 561 SHS---IDLLNSMMDRGCDPDLVTCNIFLTALKE--KLEAPQDGTDFLNELAIRLFKRQR 615
             +    + +  M + GC PD++T N  L    E  KLE   +       L  ++FKR R
Sbjct: 359 DKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVN-------LLHKMFKRMR 411



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 198/421 (47%), Gaps = 37/421 (8%)

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL--- 309
           M + G  P   T N+L N LC    +      +  +  +G +P+ VTYNTLI GLC    
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 310 --------------KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
                          G+ D+A  + + M A   +PN ++Y ++++G    G+  +  R+ 
Sbjct: 61  ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120

Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
             M ++    N   ++ LI  L KEGK  +A KL +  +++G   + V Y++LIDG C++
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKI 180

Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
           G    A ++   M + GC  N  +Y+ L+ G+ +  K  +A+ ++ +M +     N   Y
Sbjct: 181 GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTY 240

Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
           S L+ GL + GK+ +A  ++  M + G   D   Y   + GLC  G + EA++LFNE+  
Sbjct: 241 STLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKS 300

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
              K   D  +Y+ L++ LCK   +  + +    +   G  P++VTCNI +         
Sbjct: 301 YNFK--LDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGF------ 352

Query: 596 PQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
                        R+ +  + +  F+ +E M +   +P   T+  +++  C   +++  +
Sbjct: 353 ------------CRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVV 400

Query: 656 N 656
           N
Sbjct: 401 N 401



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 180/351 (51%), Gaps = 11/351 (3%)

Query: 159 SVLNVIIQEGL-----YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           SV   II +GL        A E +  +   K   ++PN ++++ ++   C  G ++ + +
Sbjct: 62  SVATCIIIDGLCKVGHEDEAKEIFEEM---KAQGMIPNVISYSSLVHGFCCAGKLEESKR 118

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           LF EM  +  +P++  +  L+D LCKE ++ EA  LL+     G     VT+N LI+G C
Sbjct: 119 LFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFC 178

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
           K G+L  A KL  +M  KGC  NE++Y  LI+G C    +++A++L + M      PN  
Sbjct: 179 KIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVK 238

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY T++ GL++ G+  D  ++   M+     V+  IY   + GL K G   +AM+L+ ++
Sbjct: 239 TYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNEL 298

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
                K +   YS LIDGLC+ GK + A E   ++   G   N  T + ++ GF    + 
Sbjct: 299 KSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQV 358

Query: 454 HKAVEIWKDMAK---NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
            KA  +++ M K   N C  + + Y+ L+ G CE  KL E   +  +M  R
Sbjct: 359 DKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 174/355 (49%), Gaps = 47/355 (13%)

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
           V+   S +  F   GK   +EE+ RLF+ MVD+   +  +  FN +++++ +EG   + +
Sbjct: 97  VISYSSLVHGFCCAGK---LEESKRLFNEMVDQ-GVQPNLVQFNVLIDILCKEG---KVI 149

Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
           E    +       I+ + +T+N +I   C++G + +A +LF  MP + CE +  +Y  L+
Sbjct: 150 EAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILI 209

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +G CK  +++EA+ L +EM   G  P   T++ L+ GL + G++G A KL   M   G  
Sbjct: 210 NGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGIS 269

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
            +   Y   + GLC  G L +A+ L + + +     +  +Y  +I+GL            
Sbjct: 270 VDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLC----------- 318

Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
                                   K GK E A + +KQ+ ++G +PN V  + +I G CR
Sbjct: 319 ------------------------KAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCR 354

Query: 415 VGKPDEAEEILFE----MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           V + D+A  ILFE    M  NGC  +  TY++L++GF ES K  + V +   M K
Sbjct: 355 VEQVDKA-NILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFK 408



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 126/242 (52%), Gaps = 7/242 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SLI  +   GD  S   +   M  +     E S+  +   Y K   VEEA+ L++ M
Sbjct: 169 TYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEM 228

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +   +  VK+++++L  ++Q G    A + +  +   K   I  ++  + + +  +C+
Sbjct: 229 -PQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVM---KASGISVDSCIYVIFLDGLCK 284

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G++  A++LF E+   N + D  +Y  L+DGLCK  +++ A     ++  +G  P  VT
Sbjct: 285 NGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVT 344

Query: 265 FNVLINGLCKNGELGRAAKL---VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            N++I+G C+  ++ +A  L   ++ M   GC P+ +TYNTL+ G C    L++ V+LL 
Sbjct: 345 CNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLH 404

Query: 322 RM 323
           +M
Sbjct: 405 KM 406


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/442 (29%), Positives = 232/442 (52%), Gaps = 15/442 (3%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVN-AKHMN---ILPNTLTFNLVIKTVCRLGLVDNAI 212
           FN +L  +++       L++Y  +++ +K M+   I  N +T +++I   C LG +  + 
Sbjct: 13  FNKILGSLVK-------LKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSF 65

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            L  ++      P+  T+ TLM GLC +  + + +   D++         V++  L+NGL
Sbjct: 66  SLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGL 125

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK GE   A KL+  +  +   PN V Y+ +I GLC    +++A  L   M A +  PN 
Sbjct: 126 CKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNV 185

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           +TY T+I      G+ +    +L  M  +  + + Y +S LI  L KEGK  +A +++  
Sbjct: 186 ITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHA 243

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M++ G  PN   Y+ +I+GLC+  + DEA  +L EM++     +  TY+SL+ G  +SG+
Sbjct: 244 MVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGR 303

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A+ +  +M       + V Y+ L+  LC++  L +A  ++ +M  RG +P +  Y++
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I GLC  G ++ A +LF  +L        DV+TY ++++ LCK+     ++ + + M D
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLV--KGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMED 421

Query: 573 RGCDPDLVTCNIFLTALKEKLE 594
            GC P+ VT  I + +L EK E
Sbjct: 422 NGCIPNAVTFEIIIRSLFEKDE 443



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 191/371 (51%), Gaps = 7/371 (1%)

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
           VR+  P I  +  ++  L K       + L  +M V G     VT ++LIN  C  G++ 
Sbjct: 4   VRHTSP-IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMA 62

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
            +  L+  +   G  PN +T+ TL+ GLCLKG + K +   D++VA     N+V+YGT++
Sbjct: 63  FSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLL 122

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           NGL K G      ++L  +E+R    N  +YS +I GL K+    +A  L+ +M  +   
Sbjct: 123 NGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIF 182

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN + Y+ LI   C  G+   A  +L EMI      + +T+S L+    + GK  K  +I
Sbjct: 183 PNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGKNAK--QI 240

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
           +  M +     N   Y+++I+GLC+  ++ EA  +  +ML +   PD V Y+S+I GLC 
Sbjct: 241 FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCK 300

Query: 520 AGSVEEALKLFNEMLCLEPKSQP-DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           +G +  AL L NEM     + QP DV TY  LL+ALCK  N+  +  L   M +RG  P 
Sbjct: 301 SGRITSALNLMNEM---HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 357

Query: 579 LVTCNIFLTAL 589
           + T    +  L
Sbjct: 358 MYTYTALIDGL 368



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 206/398 (51%), Gaps = 6/398 (1%)

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           + FN ++ ++ +L      I L ++M V+  E ++ T   L++  C   ++  +  LL +
Sbjct: 11  IEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGK 70

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           +   G  P  +T+  L+ GLC  GE+ +     D +  +    N+V+Y TL++GLC  G 
Sbjct: 71  ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE 130

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYS 371
              A+ LL  +      PN V Y  II+GL K  + V+ A  L S M+ R+   N   Y+
Sbjct: 131 TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCK-DKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
           TLI      G+   A  L  +M+ K   P+   +S LID LC+ GK   A++I   M+  
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQM 247

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   N ++Y+ ++ G  +  +  +A+ + ++M   N V + V Y+ LI GLC+ G++  A
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             +  +M  RG   DVV Y+S++  LC   ++++A  LF +M   E   QP ++TY  L+
Sbjct: 308 LNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM--KERGIQPTMYTYTALI 365

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           + LCK   + ++ +L   ++ +GC  D+ T  + ++ L
Sbjct: 366 DGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 403



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/379 (28%), Positives = 191/379 (50%), Gaps = 5/379 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++ +++  +  +G   + L F++ +V         N +++  ++  +C+ G    AI+L 
Sbjct: 82  TWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQT---NQVSYGTLLNGLCKTGETRCAIKLL 138

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
           R +  R+  P++  Y  ++DGLCK+  ++EA  L  EM     FP  +T+N LI   C  
Sbjct: 139 RMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLA 198

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+L  A  L+  M LK   P+  T++ LI  LC +G    A  +   MV     PN  +Y
Sbjct: 199 GQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSY 256

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
             +INGL K  R  +   +L  M  +    +   Y++LI GL K G+   A+ L  +M  
Sbjct: 257 NIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH 316

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +G   + V Y++L+D LC+    D+A  +  +M   G     +TY++L+ G  + G+   
Sbjct: 317 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKN 376

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A E+++ +    C  +   Y+V+I GLC++G   EA  + ++M   GC P+ V +  +I 
Sbjct: 377 AQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIR 436

Query: 516 GLCNAGSVEEALKLFNEML 534
            L      ++A KL +EM+
Sbjct: 437 SLFEKDENDKAEKLLHEMI 455



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 206/403 (51%), Gaps = 7/403 (1%)

Query: 61  SEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKS 120
            +  FS  +     KLG Y     T+ +L++     G+ K L     ++  +     + S
Sbjct: 59  GQMAFSFSLLGKILKLG-YXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVS 117

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           +  +     K      AI+L   M+++   +  V  ++++++ + ++ L + A + Y+ +
Sbjct: 118 YGTLLNGLCKTGETRCAIKLLR-MIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEM 176

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
            +A+   I PN +T+N +I   C  G +  A  L  EM ++N  PD+YT+  L+D LCKE
Sbjct: 177 -DARE--IFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE 233

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            +   A  +   M   G  P   ++N++INGLCK   +  A  L+  M  K  +P+ VTY
Sbjct: 234 GK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 291

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
           N+LI GLC  G +  A++L++ M       + VTY ++++ L K         + M M+E
Sbjct: 292 NSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 351

Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
           R      Y Y+ LI GL K G+ ++A +L++ ++ KGC  +   Y+ +I GLC+ G  DE
Sbjct: 352 RGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE 411

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           A  I  +M +NGC  NA T+  +++  FE  +  KA ++  +M
Sbjct: 412 ALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 454



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 184/347 (53%), Gaps = 5/347 (1%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           S+ ++LN + + G    A++    I   +  +  PN + ++ +I  +C+  LV+ A  L+
Sbjct: 117 SYGTLLNGLCKTGETRCAIKLLRMI---EDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLY 173

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            EM  R   P++ TY TL+   C   +L  A  LL EM +    P   TF++LI+ LCK 
Sbjct: 174 SEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE 233

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G+   A ++   M   G  PN  +YN +I+GLC    +D+A++LL  M+    +P+ VTY
Sbjct: 234 GK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 291

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            ++I+GL K GR      ++  M  R    +   Y++L+  L K    + A  L+ +M E
Sbjct: 292 NSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 351

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +G +P    Y+ALIDGLC+ G+   A+E+   ++  GC  + +TY+ ++ G  + G   +
Sbjct: 352 RGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE 411

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           A+ I   M  N C+ N V + ++I  L E  +  +A  +  +M+++G
Sbjct: 412 ALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKG 458



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 189/381 (49%), Gaps = 19/381 (4%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGD----FKSLEMVLYRMRR 111
           +G  K    F D++        ++Q    ++ +L+     +G+     K L M+  R  R
Sbjct: 93  KGEVKKLLHFHDKVVAQ-----AFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTR 147

Query: 112 EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
              V+    +  I     K  LV EA  L+  M D       V ++N+++      G   
Sbjct: 148 PNVVM----YSAIIDGLCKDKLVNEAYDLYSEM-DAREIFPNVITYNTLICAFCLAGQLM 202

Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            A    + ++     NI P+  TF+++I  +C+ G   NA Q+F  M      P++Y+Y 
Sbjct: 203 GAFSLLHEMILK---NINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYN 257

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            +++GLCK  R+DEA+ LL EM      P  VT+N LI+GLCK+G +  A  L++ M  +
Sbjct: 258 IMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHR 317

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G   + VTY +L+  LC   NLDKA +L  +M      P   TY  +I+GL K GR  + 
Sbjct: 318 GQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNA 377

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
             +   +  +   ++ + Y+ +ISGL KEG  ++A+ +  +M + GC PN V +  +I  
Sbjct: 378 QELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRS 437

Query: 412 LCRVGKPDEAEEILFEMINNG 432
           L    + D+AE++L EMI  G
Sbjct: 438 LFEKDENDKAEKLLHEMIAKG 458



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/324 (25%), Positives = 158/324 (48%), Gaps = 25/324 (7%)

Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
           + +  I+  LVKL   +    +   M+ +    N    S LI+     G+   +  L  +
Sbjct: 11  IEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGK 70

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           +++ G  PNT+ ++ L+ GLC  G+  +      +++      N  +Y +L+ G  ++G+
Sbjct: 71  ILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGE 130

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A+++ + +   +   N V YS +I GLC+D  + EA  ++++M +R   P+V+ Y++
Sbjct: 131 TRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNT 190

Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
           +I   C AG +  A  L +EM+       PDV+T++IL++ALCK+   +  I   ++M+ 
Sbjct: 191 LICAFCLAGQLMGAFSLLHEMIL--KNINPDVYTFSILIDALCKEGKNAKQI--FHAMVQ 246

Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
            G +P++ + NI +  L                      K +R      ++  ML K + 
Sbjct: 247 MGVNPNVYSYNIMINGL---------------------CKCKRVDEAMNLLREMLHKNMV 285

Query: 633 PQTSTWERVVQELCRPKRIQAAIN 656
           P T T+  ++  LC+  RI +A+N
Sbjct: 286 PDTVTYNSLIDGLCKSGRITSALN 309



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 77/141 (54%), Gaps = 3/141 (2%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V ++ S+L+ + +     +A   +   +  K   I P   T+  +I  +C+ G + NA +
Sbjct: 323 VVTYTSLLDALCKNQNLDKATALF---MKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE 379

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           LF+ + V+ C  D++TY  ++ GLCKE   DEA+ +  +M+ +GC P  VTF ++I  L 
Sbjct: 380 LFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLF 439

Query: 274 KNGELGRAAKLVDNMFLKGCL 294
           +  E  +A KL+  M  KG L
Sbjct: 440 EKDENDKAEKLLHEMIAKGLL 460


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 202/400 (50%), Gaps = 3/400 (0%)

Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
           +A+  F  M +    P  + +  ++  L K  R    + L  + + +G  P   T ++LI
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
           N  C    +  A  +  N+  +G  PN +T NTLI GLC  G + +A+   D++VA    
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
            ++V+YGT+INGL K G     AR+L  +E      +  +Y+T+I  L K     DA  L
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + +M+ KG  PN   Y+ LI G C +G   EA  +L EM       + +T++ L+    +
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
            GK  +A+ ++++M   N   N V Y+ LI GLC++  L  A  +  +M  +G +P+V +
Sbjct: 284 EGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYS 343

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           Y+ ++  LC  G +E A + F  +L        +V TYN+++N LCK       +DL + 
Sbjct: 344 YTILLDALCKGGRLENAKQFFQHLLV--KGYHLNVRTYNVMINGLCKAGLFGDVMDLKSK 401

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           M  +GC P+ +T    + AL EK E  +    FL E+  R
Sbjct: 402 MEGKGCMPNAITFKTIICALLEKDENDK-AEKFLREMIAR 440



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 185/378 (48%), Gaps = 3/378 (0%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           FN++L+ +++   Y   +  +      +   I P+  T +++I   C L  +  A  +F 
Sbjct: 64  FNNILSSLVKNKRYPTVISLFKQF---EPNGITPDLCTLSILINCFCHLTHITFAFSVFA 120

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            +  R   P+  T  TL+ GLC    +  A+   D++   G     V++  LINGLCK G
Sbjct: 121 NILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAG 180

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           E    A+L+  +      P+ V Y T+IH LC    L  A  L   M+     PN  TY 
Sbjct: 181 ETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYT 240

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+I+G   +G   +   +L  M+ +  + + Y ++ LI  L KEGK ++AM L+++M  K
Sbjct: 241 TLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHK 300

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
              PN V Y++LIDGLC+    + A  +  +M   G   N ++Y+ L+    + G+   A
Sbjct: 301 NMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENA 360

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            + ++ +       N   Y+V+I+GLC+ G   +   + ++M  +GC P+ + + ++I  
Sbjct: 361 KQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICA 420

Query: 517 LCNAGSVEEALKLFNEML 534
           L      ++A K   EM+
Sbjct: 421 LLEKDENDKAEKFLREMI 438



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 160/313 (51%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T N +IK +C  G +  A+    ++  +  + D  +Y TL++GLCK         L
Sbjct: 129 PNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARL 188

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +++     P  V +  +I+ LCKN  LG A  L   M +KG  PN  TY TLIHG C+
Sbjct: 189 LRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCI 248

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            GNL +A SLL+ M      P+  T+  +I+ L K G+  +   +   M+ +    N   
Sbjct: 249 MGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVT 308

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y++LI GL K    E A+ L K+M E+G +PN   Y+ L+D LC+ G+ + A++    ++
Sbjct: 309 YTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLL 368

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   N  TY+ ++ G  ++G     +++   M    C+ N + +  +I  L E  +  
Sbjct: 369 VKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDEND 428

Query: 490 EARMVWTQMLSRG 502
           +A     +M++RG
Sbjct: 429 KAEKFLREMIARG 441



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 182/386 (47%), Gaps = 4/386 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P T  FN ++ ++ +       I LF++       PD+ T   L++  C    +  A  +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
              +   G  P  +T N LI GLC  GE+ RA    D +  +G   ++V+Y TLI+GLC 
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G       LL ++      P+ V Y TII+ L K     D   +   M  +    N + 
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI G    G  ++A  L  +M  K   P+   ++ LID L + GK DEA  +  EM 
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +     N  TY+SL+ G  ++    +A+ + K M +     N   Y++L+  LC+ G+L 
Sbjct: 299 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLE 358

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYN 548
            A+  +  +L +G   +V  Y+ MI+GLC AG   + + L ++M   E K   P+  T+ 
Sbjct: 359 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM---EGKGCMPNAITFK 415

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRG 574
            ++ AL ++     +   L  M+ RG
Sbjct: 416 TIICALLEKDENDKAEKFLREMIARG 441



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 100/210 (47%), Gaps = 4/210 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI  +   G+ K    +L  M+ +       +F  +  A  K   ++EA+ LF  M
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +      V ++ S+++ + +     RA+     +   K   I PN  ++ +++  +C+
Sbjct: 298 KHKNMFPNIV-TYTSLIDGLCKNHHLERAIALCKKM---KEQGIQPNVYSYTILLDALCK 353

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++NA Q F+ + V+    ++ TY  +++GLCK     + + L  +M+  GC P  +T
Sbjct: 354 GGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAIT 413

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           F  +I  L +  E  +A K +  M  +G L
Sbjct: 414 FKTIICALLEKDENDKAEKFLREMIARGLL 443


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 164/660 (24%), Positives = 306/660 (46%), Gaps = 66/660 (10%)

Query: 2   RKWSLPHTKILLTITNSAMKMKTLSLTTIPSERSHRFFSV---RSAVSSNKQ-----MET 53
           RKWS    ++LLT  N  + ++ L++  +  E + RFF+    +S V  ++Q     +E 
Sbjct: 71  RKWSSHQFRLLLTDPN--LLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEI 128

Query: 54  EPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREK 113
             + +  SE     E    +  LG +++ D                  L  V  +    +
Sbjct: 129 LAENDLMSEAYLVAE---RSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAE 185

Query: 114 RVVL------EKSFI-------FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSV 160
           + +L       K F+        + K    + ++ +A  ++ TM+ E     TV +FN++
Sbjct: 186 KFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMI-EHGIMPTVITFNTM 244

Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           L+   + G   R  + +   +  K  NI  + +T+N++I    + G ++ A +   +M  
Sbjct: 245 LDSCFKAGDLERVDKIW---LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR 301

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
                  Y++  L++G CK+   D+A  + DEM   G +PT  T+N+ I  LC  G +  
Sbjct: 302 SGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDD 361

Query: 281 AAKLVDNM--------------------FLKGCL-----------PNEVTYNTLIHGLCL 309
           A +L+ +M                    F++  L           P+ VTYNTLI GLC 
Sbjct: 362 ARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE 421

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            GNL+ A  L + M      P+ +TY T++ G VK G       V   M  +    + Y 
Sbjct: 422 SGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYA 481

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCK-PNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           Y+T   G  + G ++ A +L ++M+      P+  +Y+  IDGLC+VG   +A E   ++
Sbjct: 482 YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 541

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G   +  TY+++++G+ E+G+   A  ++ +M +     + + Y VLI+G  + G+L
Sbjct: 542 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRL 601

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A    T+M  RG +P+V+ ++++++G+C AG+++EA +   +M   E    P+ ++Y 
Sbjct: 602 EQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM--EEEGIPPNKYSYT 659

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
           +L++  C        + L   M+D+  +PD  T       L++  E+ +   +FL  L +
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESRE--VEFLERLLL 717



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 207/483 (42%), Gaps = 71/483 (14%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF +++     +GD + ++ +   M+R      E ++  +   + K   +EEA R FH  
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEA-RRFHGD 298

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +       T  SFN ++    ++GL+  A    + ++NA    I P T T+N+ I  +C 
Sbjct: 299 MRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA---GIYPTTSTYNIYICALCD 355

Query: 205 LGLVDNAIQL-------------------------------FREMPVRNCEPDIYTYCTL 233
            G +D+A +L                               F ++   +  P I TY TL
Sbjct: 356 FGRIDDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415

Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
           +DGLC+   L+ A  L +EM     FP  +T+  L+ G  KNG L  A ++ D M  KG 
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGI 475

Query: 294 ------------------------------------LPNEVTYNTLIHGLCLKGNLDKAV 317
                                                P+   YN  I GLC  GNL KA+
Sbjct: 476 KPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAI 535

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
               ++     +P+ VTY T+I G ++ G+      +   M  ++ + +   Y  LI G 
Sbjct: 536 EFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGH 595

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            K G+ E A +   +M ++G +PN + ++AL+ G+C+ G  DEA   L +M   G   N 
Sbjct: 596 AKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNK 655

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
           ++Y+ L+    +  K  + V+++K+M       +   +  L   L +D + RE   +   
Sbjct: 656 YSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERL 715

Query: 498 MLS 500
           +LS
Sbjct: 716 LLS 718


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/403 (29%), Positives = 205/403 (50%), Gaps = 9/403 (2%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
           + P+  T+ ++IK +CR G +D A  +  E+     +P + TY  LMD LC+  R++EA 
Sbjct: 212 VAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAF 271

Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
            L   M      P+ VTF +LINGL +    G    ++  M   G  PNEV YN LI   
Sbjct: 272 QLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWH 331

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C +G+  +A+ L D MV+       VTY  I   L K G      ++L  M      V+ 
Sbjct: 332 CREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHC 391

Query: 368 YIYSTLIS-GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            +++++++  L   G+ +  ++L ++M+ +  KPN  V +A I  LC+ GK +EA EI F
Sbjct: 392 SLFNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWF 451

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
            ++  G   N  T ++L+ G  +     +A ++ K M  +   ++ + Y+++I   C+  
Sbjct: 452 LVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKAS 511

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PD 543
           K+ EA  +   M+ RG KPD+  +++ +   CN G VE+ L L ++M     KS+   PD
Sbjct: 512 KMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQM-----KSEGLKPD 566

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
           + TY  +++  CK  ++  +   L  ++  G  P+ V  N  +
Sbjct: 567 IVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALI 609



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 143/556 (25%), Positives = 249/556 (44%), Gaps = 48/556 (8%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I+    +G+  +  ++L  + R        ++  +  A  ++  VEEA +L   M
Sbjct: 218 TYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRM 277

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V E   + ++ +F  ++N + +     R  E    +   +   I PN + +N +I   CR
Sbjct: 278 V-EGRLRPSIVTFGILINGLARG---QRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCR 333

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF----- 259
            G    A++LF EM  +  +  + TY  +   LCKE  ++ A  +LDEM + G       
Sbjct: 334 EGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSL 393

Query: 260 -------------------------------PTPVTFNVLINGLCKNGELGRAAKLVDNM 288
                                          P        I  LCK G+   AA++   +
Sbjct: 394 FNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLV 453

Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
             KG   N  T N LIHGLC   N+ +A  +L  MV S    + +TY  +I    K  + 
Sbjct: 454 LGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKM 513

Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
            +  ++   M +R F  + + ++T +      GK ED + L  QM  +G KP+ V Y  +
Sbjct: 514 EEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTI 573

Query: 409 IDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNC 468
           IDG C+     +A + L E+I NG   NA  Y++L+ G+  +G    A+ +   M  N  
Sbjct: 574 IDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGI 633

Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
               + Y+ L++ +C  G + EA+ ++ Q + +  +  V+ Y+ +I G C  G ++EA+ 
Sbjct: 634 QPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVM 693

Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT- 587
            F EM   + +  P+  TY  L+ A CK  N   +  L + M+  G  PD V+ N  ++ 
Sbjct: 694 YFKEMHYRDIR--PNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISG 751

Query: 588 -----ALKEKLEAPQD 598
                +L + +E+P +
Sbjct: 752 CCEVDSLDKIVESPAE 767



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/386 (32%), Positives = 198/386 (51%), Gaps = 6/386 (1%)

Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG--CFPTPV 263
           G +  A   F E+  R   P I T   L++ L    +LD A  +  EM+ DG    P   
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMR-DGNAVAPDVY 217

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
           T+ V+I  LC+ GE+  A  ++  +   G  P  VTYN L+  LC  G +++A  L  RM
Sbjct: 218 TYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRM 277

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           V  +  P+ VT+G +INGL +  R  +   VL  ME      NE IY+ LI    +EG  
Sbjct: 278 VEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHC 337

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
            +A++L+ +M+ KG K   V Y+ +   LC+ G+ + AE+IL EM+  G   +   ++S+
Sbjct: 338 SEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSV 397

Query: 444 MKGFFE-SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           +      +G+    + + ++M       N+   +  I  LC+ GK  EA  +W  +L +G
Sbjct: 398 VAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKG 457

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
              ++   +++IHGLC   +++EA K+   M  ++   + D  TYNI++   CK S +  
Sbjct: 458 LGVNIATSNALIHGLCQGNNMKEATKVLKAM--VDSGVEFDRITYNIMIQFCCKASKMEE 515

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +I L + M+ RG  PDL T N FL A
Sbjct: 516 AIQLRDDMIKRGFKPDLFTFNTFLRA 541



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 221/462 (47%), Gaps = 6/462 (1%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            + +A G    ++ A ++F  M D       V ++  ++  + + G    A   +  +  
Sbjct: 185 ILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAA---FVMLAE 241

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            +   I P  +T+N+++  +CR G V+ A QL   M      P I T+  L++GL +  R
Sbjct: 242 LERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQR 301

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
             E   +L EM+  G  P  V +N LI   C+ G    A +L D M  KG     VTYN 
Sbjct: 302 FGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNL 361

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN-GLVKLGRAVDGARVLMSMEER 361
           +   LC +G ++ A  +LD M+ +    +   + +++   L   GR     R++  M  R
Sbjct: 362 IAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIREMVAR 421

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
               N+ + +  I  L K GK E+A ++W  ++ KG   N    +ALI GLC+     EA
Sbjct: 422 FLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEA 481

Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
            ++L  M+++G   +  TY+ +++   ++ K  +A+++  DM K     +   ++  +  
Sbjct: 482 TKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRA 541

Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
            C  GK+ +   +  QM S G KPD+V Y ++I G C A  V +A K   E+  ++   +
Sbjct: 542 YCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIEL--IKNGLR 599

Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           P+   YN L+    +  +IS +I +L++M   G  P  +T N
Sbjct: 600 PNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYN 641



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 223/482 (46%), Gaps = 34/482 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  LI   A    F  ++ VL  M        E  +  +   + +     EA+RLF  M
Sbjct: 288 TFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEM 347

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN--------------------HIVNAK 184
           V +   K+TV ++N +   + +EG    A +  +                    H+    
Sbjct: 348 VSK-GIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTG 406

Query: 185 HMNIL-------------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
            ++++             PN       I+ +C+ G  + A +++  +  +    +I T  
Sbjct: 407 RLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSN 466

Query: 232 TLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
            L+ GLC+ N + EA  +L  M   G     +T+N++I   CK  ++  A +L D+M  +
Sbjct: 467 ALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKR 526

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G  P+  T+NT +   C  G ++  + LLD+M +    P+ VTYGTII+G  K       
Sbjct: 527 GFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKA 586

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            + L+ + +     N  IY+ LI G  + G   DA+ +   M   G +P  + Y++L+  
Sbjct: 587 NKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYW 646

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           +C  G  +EA+EI  + I          Y+ +++GF + GK  +AV  +K+M   +   N
Sbjct: 647 MCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPN 706

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
           ++ Y+ L++  C+ G   EA  ++ +M+S G  PD V+Y+++I G C   S+++ ++   
Sbjct: 707 KMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPA 766

Query: 532 EM 533
           EM
Sbjct: 767 EM 768



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 146/274 (53%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           + +T+N++I+  C+   ++ AIQL  +M  R  +PD++T+ T +   C   ++++ + LL
Sbjct: 496 DRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLL 555

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           D+M+ +G  P  VT+  +I+G CK  ++ +A K +  +   G  PN V YN LI G    
Sbjct: 556 DQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRN 615

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G++  A+ +LD M  +   P  +TY +++  +   G   +   +      +   +    Y
Sbjct: 616 GSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGY 675

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
           + +I G  K GK ++A+  +K+M  +  +PN + Y+ L+   C+ G  +EA ++  EM++
Sbjct: 676 TIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVS 735

Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
           +G   +  +Y++L+ G  E     K VE   +M+
Sbjct: 736 SGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMS 769



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 131/291 (45%), Gaps = 19/291 (6%)

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFT 439
           G    A   + ++  +G  P+    + L++ L   G+ D A ++  EM + N  A + +T
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYT 218

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ ++K    +G+   A  +  ++ ++      V Y+VL+  LC  G++ EA  +  +M+
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
               +P +V +  +I+GL       E   +  EM        P+   YN L+   C++ +
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGF--GITPNEVIYNQLIGWHCREGH 336

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTD-------------FLN 604
            S ++ L + M+ +G    +VT N+   AL  + ++E  +   D             F +
Sbjct: 337 CSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNS 396

Query: 605 ELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC-RPKRIQAA 654
            +A  L    R     +++  M+ +FL P  +     +QELC R K  +AA
Sbjct: 397 VVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAA 447


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 210/386 (54%), Gaps = 7/386 (1%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           V EA+ L H  VD       V  + +++N + + G    A++ +  +   K + + PN +
Sbjct: 156 VLEAVSLLHEYVDRGFRFDEV-CYGTIINGLCKIGKTRDAIQMFPKM---KKIRVYPNLI 211

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
            +N VI  +C+ GLVD A  L  EM     E D+Y+Y +++ G C   R   AV LLDEM
Sbjct: 212 MYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEM 271

Query: 254 QVDG-CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
            V G  +P   TFN+LI+GLCK G +  A  +V  M  +G  P+ V+YN L++G CL G+
Sbjct: 272 VVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGS 331

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYS 371
           + +A  + D+MV    +PN ++Y T+ING  K+ R VD A VL++ M  +    +   Y+
Sbjct: 332 VGEAKQVFDKMVERTALPNVISYCTLINGYCKV-RMVDEAMVLLTEMHNKNLVPDTVTYN 390

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            L+ GL K G++     L + M   G   + + Y+ L+D   +  K D+A  +   +I  
Sbjct: 391 CLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEI 450

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G + N  TY+ L+ G  +SG+   A EI++ ++   C  N   Y+++IHGLC++G L EA
Sbjct: 451 GISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEA 510

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGL 517
             +  +M++    P+ + + +++  +
Sbjct: 511 EALLYKMVNNNYLPNYITFDTIVRAI 536



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/424 (30%), Positives = 218/424 (51%), Gaps = 25/424 (5%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCF-PTPVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           L+  L K  R +  V L   +Q      P+ +TF++LIN   + G++G A  L+ N+   
Sbjct: 75  LLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKM 134

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G   +     TL+ GLCLKG + +AVSLL   V      +EV YGTIINGL K+G+  D 
Sbjct: 135 GFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDA 194

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
            ++   M++ + + N  +Y+T+I GL K+G  ++A  L  +M+E G + +   Y+++I G
Sbjct: 195 IQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHG 254

Query: 412 LCRVGKPDEAEEILFEMINNG-CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
            C VG+   A ++L EM+  G    + +T++ L+ G  + G+  +A  +   M K     
Sbjct: 255 FCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKP 314

Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
           + V Y+ L++G C  G + EA+ V+ +M+ R   P+V++Y ++I+G C    V+EA+ L 
Sbjct: 315 DIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLL 374

Query: 531 NEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALK 590
            EM        PD  TYN LL+ L K     +  DL+ +M   G   DL+T N+ L    
Sbjct: 375 TEM--HNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLL---- 428

Query: 591 EKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKR 650
                     D+        FK ++      + + +++  +SP   T+  ++  LC+  R
Sbjct: 429 ---------DDY--------FKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGR 471

Query: 651 IQAA 654
           ++ A
Sbjct: 472 LKYA 475



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 199/361 (55%), Gaps = 3/361 (0%)

Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
           +  +I  +C++G   +AIQ+F +M      P++  Y T++DGLCK+  +DEA  L  EM 
Sbjct: 178 YGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMV 237

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTYNTLIHGLCLKGNL 313
            +G      ++N +I+G C  G    A KL+D M ++G   P+  T+N LI GLC  G +
Sbjct: 238 ENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRV 297

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
            +A +++  M+     P+ V+Y  ++NG    G   +  +V   M ER    N   Y TL
Sbjct: 298 SEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTL 357

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           I+G  K    ++AM L  +M  K   P+TV Y+ L+DGL + G+     +++  M  +G 
Sbjct: 358 INGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQ 417

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
            A+  TY+ L+  +F+  K  KA+ +++ + +     N   Y++L+ GLC+ G+L+ A+ 
Sbjct: 418 PADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKE 477

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           ++  + ++GC+P++  Y+ MIHGLC  G ++EA  L  +M  +     P+  T++ ++ A
Sbjct: 478 IFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM--VNNNYLPNYITFDTIVRA 535

Query: 554 L 554
           +
Sbjct: 536 I 536



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 227/435 (52%), Gaps = 7/435 (1%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           FN +L+ +I+   Y+  +  Y  I+ +K   I P+ +TF+++I    +LG +  A  L  
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYT-ILQSKP-TIKPSLITFSILINAFAQLGQMGFAFSLLG 129

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
            +     + D+    TLM GLC + R+ EAV LL E    G     V +  +INGLCK G
Sbjct: 130 NILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIG 189

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
           +   A ++   M      PN + YNT+I GLC +G +D+A  L   MV +    +  +Y 
Sbjct: 190 KTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYN 249

Query: 337 TIINGLVKLGRAVDGARVLMSMEER-KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
           ++I+G   +GR     ++L  M  R K + + Y ++ LI GL K G+  +A  +   M++
Sbjct: 250 SMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIK 309

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
           +G KP+ V Y+AL++G C  G   EA+++  +M+      N  +Y +L+ G+ +     +
Sbjct: 310 RGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDE 369

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK-LREARMVWTQMLSRGCKPDVVAYSSMI 514
           A+ +  +M   N V + V Y+ L+ GL + G+ L E  +V   M + G   D++ Y+ ++
Sbjct: 370 AMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLV-EAMRASGQPADLITYNVLL 428

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
                    ++AL LF  +  +E    P++ TYNILL+ LCK   + ++ ++   +  +G
Sbjct: 429 DDYFKHEKFDKALALFQHI--IEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG 486

Query: 575 CDPDLVTCNIFLTAL 589
           C P++ T NI +  L
Sbjct: 487 CQPNIRTYNIMIHGL 501



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 228/457 (49%), Gaps = 6/457 (1%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
            + L+  +  +   K ++ +F+ ++N   Q G    A     +I+    M    +     
Sbjct: 88  VVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILK---MGFQIDVRILT 144

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
            ++K +C  G V  A+ L  E   R    D   Y T+++GLCK  +  +A+ +  +M+  
Sbjct: 145 TLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKI 204

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
             +P  + +N +I+GLCK G +  A  L   M   G   +  +YN++IHG C  G    A
Sbjct: 205 RVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAA 264

Query: 317 VSLLDRMVA-SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
           V LLD MV   K  P+  T+  +I+GL KLGR  +   V+  M +R +  +   Y+ L++
Sbjct: 265 VKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMN 324

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G    G   +A +++ +M+E+   PN + Y  LI+G C+V   DEA  +L EM N     
Sbjct: 325 GYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVP 384

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  TY+ L+ G  +SG+     ++ + M  +    + + Y+VL+    +  K  +A  ++
Sbjct: 385 DTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALF 444

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             ++  G  P++  Y+ ++ GLC +G ++ A ++F   L      QP++ TYNI+++ LC
Sbjct: 445 QHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQ--LLSAKGCQPNIRTYNIMIHGLC 502

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           K+  +  +  LL  M++    P+ +T +  + A+  K
Sbjct: 503 KEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAILVK 539



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 40/300 (13%)

Query: 80  QLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAI 138
           +L   ++ S+I  + + G F++   +L  M    +V  +  +F  +     K   V EA 
Sbjct: 242 ELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAY 301

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
            +   M+     K  + S+N+++N     G    A + ++ +V       LPN +++  +
Sbjct: 302 NVVAVMIKR-GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVER---TALPNVISYCTL 357

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR---------------- 242
           I   C++ +VD A+ L  EM  +N  PD  TY  L+DGL K  R                
Sbjct: 358 INGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQ 417

Query: 243 -------------------LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
                               D+A+ L   +   G  P   T+N+L++GLCK+G L  A +
Sbjct: 418 PADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKE 477

Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
           +   +  KGC PN  TYN +IHGLC +G LD+A +LL +MV +  +PN +T+ TI+  ++
Sbjct: 478 IFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 112/226 (49%), Gaps = 4/226 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           ++ +L+  Y  SG     + V  +M     +    S+  +   Y K  +V+EA+ L   M
Sbjct: 318 SYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEM 377

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            ++     TV ++N +L+ + + G   R+L  ++ +   +      + +T+N+++    +
Sbjct: 378 HNKNLVPDTV-TYNCLLDGLSKSG---RSLYEWDLVEAMRASGQPADLITYNVLLDDYFK 433

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
               D A+ LF+ +      P+I TY  L+DGLCK  RL  A  +   +   GC P   T
Sbjct: 434 HEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRT 493

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
           +N++I+GLCK G L  A  L+  M     LPN +T++T++  + +K
Sbjct: 494 YNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAILVK 539


>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 234/470 (49%), Gaps = 5/470 (1%)

Query: 65  FSDEIFNSTPKLGSYQLGDS-TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF 123
           F  ++ +++ + GS+   D  T   ++Q+  + G   +   ++  M R  ++    S I 
Sbjct: 20  FQTDLTSASDRYGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCIN 79

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + +   K    E A R+   MV        + ++N ++  + ++GL   A+E  + +  +
Sbjct: 80  LIRGLIKLESTERATRVLKIMVMSGGIPDII-TYNMLVGGLCKKGLLKTAIELLDEMSLS 138

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 P+ +T+N +++ +   G  D AI  +++   + C   + TY  L++ +CK    
Sbjct: 139 ---GCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGT 195

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            +A+ +L++M ++GC+P  VT+N L+N  CK G+    A ++ N+   G  PN VTYNTL
Sbjct: 196 VQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTL 255

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +H LC  G  D+   +L  M  +   P  VTY  +INGL K G           M     
Sbjct: 256 LHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNC 315

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   Y+TL++ L KEG  ++A+ L   + +  C P  + Y+ +IDGL + G  ++A E
Sbjct: 316 LPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAME 375

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  EMI  G A +  T+ +L  G F       A+ I K+M K N       +  +IHGLC
Sbjct: 376 LYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLC 435

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +  K+  A  V   M+S  CKP+   YS++I G+  AG +EEA +L  ++
Sbjct: 436 KKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKL 485



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 187/380 (49%), Gaps = 2/380 (0%)

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           T N +++ +C  G + NA +L   M  RN  P   +   L+ GL K    + A  +L  M
Sbjct: 41  TNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVLKIM 100

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
            + G  P  +T+N+L+ GLCK G L  A +L+D M L GC P+ +TYNT++  +   G  
Sbjct: 101 VMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDHGGF 160

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
           D+A+      +   C    +TY  +I  + K    V    VL  M     + +   Y++L
Sbjct: 161 DQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSL 220

Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
           ++   K+GK ED   +   ++  G  PNTV Y+ L+  LC  G  DE +EIL  M     
Sbjct: 221 VNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQ 280

Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
                TY+ L+ G  + G   +A+  +  M  +NC+ + + Y+ L+  LC++G + EA  
Sbjct: 281 PPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALH 340

Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
           +   +    C P ++ Y+ +I GL   G +E+A++L+ EM  +E    PD  T+  L   
Sbjct: 341 LLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEM--IERGFAPDDITHRTLFWG 398

Query: 554 LCKQSNISHSIDLLNSMMDR 573
           L +   +  ++ +L  M  R
Sbjct: 399 LFRLDLVEDALVILKEMNKR 418



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 202/443 (45%), Gaps = 63/443 (14%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPT-PVTFNVLINGLCKNGELGRAAKLVDNMFLK 291
           ++  LC + +L  A  L+D M      P  P   N LI GL K     RA +++  M + 
Sbjct: 45  ILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCIN-LIRGLIKLESTERATRVLKIMVMS 103

Query: 292 GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDG 351
           G +P+ +TYN L+ GLC KG L  A+ LLD M  S C P+ +TY TI+  +         
Sbjct: 104 GGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCM--------- 154

Query: 352 ARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDG 411
                                     F  G  + A+  WK  + KGC    + Y+ LI+ 
Sbjct: 155 --------------------------FDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIEL 188

Query: 412 LCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYN 471
           +C+     +A E+L +M   GC  +  TY+SL+    + GK      I  ++  +    N
Sbjct: 189 VCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPN 248

Query: 472 EVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
            V Y+ L+H LC  G   E   +   M +    P VV Y+ +I+GLC  G ++ A+  F+
Sbjct: 249 TVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFD 308

Query: 532 EML---CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           +M+   CL     PD+ TYN LL ALCK+  +  ++ LL+S+ D  C P L+T NI +  
Sbjct: 309 QMVSHNCL-----PDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDG 363

Query: 589 LKEK--LE--------------APQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLS 632
           L +K  +E              AP D T     L   LF+         I++ M ++   
Sbjct: 364 LAKKGCMEKAMELYGEMIERGFAPDDITH--RTLFWGLFRLDLVEDALVILKEMNKRNQR 421

Query: 633 PQTSTWERVVQELCRPKRIQAAI 655
            + S +  V+  LC+ K++  AI
Sbjct: 422 IKNSAFRFVIHGLCKKKKVDIAI 444



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 181/371 (48%), Gaps = 39/371 (10%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           K  L++ AI L   M     C     ++N++L  +   G + +A+ F+   +       L
Sbjct: 121 KKGLLKTAIELLDEM-SLSGCPPDAITYNTILRCMFDHGGFDQAIGFWKDQLRKGCPAYL 179

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
              +T+ ++I+ VC+      A+++  +M +  C PDI TY +L++  CK+ + ++  L+
Sbjct: 180 ---ITYTVLIELVCKHCGTVQAMEVLEDMAIEGCYPDIVTYNSLVNYTCKQGKYEDTALI 236

Query: 250 L-------------------------------DE----MQVDGCFPTPVTFNVLINGLCK 274
           +                               DE    M      PT VT+N+LINGLCK
Sbjct: 237 IYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMNTTSQPPTVVTYNILINGLCK 296

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G L RA    D M    CLP+ +TYNTL+  LC +G +D+A+ LL  +  ++C P  +T
Sbjct: 297 YGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLIT 356

Query: 335 YGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMM 394
           Y  +I+GL K G       +   M ER F  ++  + TL  GLF+    EDA+ + K+M 
Sbjct: 357 YNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMN 416

Query: 395 EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGH 454
           ++  +     +  +I GLC+  K D A ++L  M+++ C  N   YS+++KG   +G   
Sbjct: 417 KRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIE 476

Query: 455 KAVEIWKDMAK 465
           +A ++ + + +
Sbjct: 477 EANQLHQKLTE 487



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 120/242 (49%), Gaps = 38/242 (15%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++L+ +   G +    E    I+N       P  +T+N++I  +C+ GL+D AI  F
Sbjct: 251 TYNTLLHSLCTHGYWDEVDEIL-LIMNTTSQP--PTVVTYNILINGLCKYGLLDRAINFF 307

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
            +M   NC PDI TY TL+  LCKE  +DEA+ LL  +    C P  +T+N++I+GL K 
Sbjct: 308 DQMVSHNCLPDIITYNTLLAALCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKK 367

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTL-------------------------------- 303
           G + +A +L   M  +G  P+++T+ TL                                
Sbjct: 368 GCMEKAMELYGEMIERGFAPDDITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAF 427

Query: 304 ---IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
              IHGLC K  +D A+ +L+ MV+S+C PNE  Y  II G+   G   +  ++   + E
Sbjct: 428 RFVIHGLCKKKKVDIAIQVLEMMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTE 487

Query: 361 RK 362
            K
Sbjct: 488 LK 489



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 128/286 (44%), Gaps = 45/286 (15%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRRE---KRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ SL+ +    G ++   +++Y +         V   + +     +G    V+E + + 
Sbjct: 216 TYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIM 275

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
           +T         TV ++N ++N + + GL  RA+ F++ +V+    N LP+ +T+N ++  
Sbjct: 276 NTTSQ----PPTVVTYNILINGLCKYGLLDRAINFFDQMVSH---NCLPDIITYNTLLAA 328

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +C+ G+VD A+ L   +    C P + TY  ++DGL K+  +++A+ L  EM   G  P 
Sbjct: 329 LCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPD 388

Query: 262 PVT-----------------------------------FNVLINGLCKNGELGRAAKLVD 286
            +T                                   F  +I+GLCK  ++  A ++++
Sbjct: 389 DITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLE 448

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
            M    C PNE  Y+ +I G+   G +++A  L  ++   K    E
Sbjct: 449 MMVSSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKVFREE 494


>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
          Length = 1315

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 228/455 (50%), Gaps = 16/455 (3%)

Query: 145  VDEFHCKRTVKSF---NSVLNVII----QEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
             D + C+   + F   N+ L +II    ++ L +RA+ F++ +     M + PN + ++ 
Sbjct: 850  ADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTK---MGLSPNLINYSS 906

Query: 198  VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV-LLLDEMQVD 256
            +I  +C+ G V  A +L  EM     +P++YT+ +L+ GLCK+   + A  L L  ++ D
Sbjct: 907  MISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSD 966

Query: 257  GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
               P   T+  +I+G CK  +L RA  L + M  +G +PN  TY TLI G C  GN  KA
Sbjct: 967  NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKA 1026

Query: 317  VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
              L++ M      PN  TY +I++GL K GRA +  ++L +  + +   +   Y+ LIS 
Sbjct: 1027 YELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGVTYTILISE 1086

Query: 377  LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
              K      A+    +M + G +P+  +Y+ LI   CR     ++E++  E+I  G A  
Sbjct: 1087 QCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLGLAPT 1146

Query: 437  AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
              TY+S++ G+    K   AV+ ++ M+ + C  + + Y  LI GLC++ +L EAR ++ 
Sbjct: 1147 KETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEARQLYD 1206

Query: 497  QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
             M+ +G  P  V   ++ +  C       A+ +   +       +  + T + L+  LC 
Sbjct: 1207 TMIDKGLSPCEVTRVTLTYEYCKTEDFASAMVILERL-----NKKLWIRTVHTLIRKLCC 1261

Query: 557  QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
            +  ++ +    + ++D+  + D VT   F TA  E
Sbjct: 1262 EKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIE 1296



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 228/482 (47%), Gaps = 24/482 (4%)

Query: 175  EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
            E  + I++ ++  ++  T   N +I     + LV+ A  +F EM  R   PD  TY  ++
Sbjct: 779  EAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYII 838

Query: 235  DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
             G C+   + EA   + EM   G      T  ++I   C+   + RA      +   G  
Sbjct: 839  VGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLS 898

Query: 295  PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
            PN + Y+++I GLC +G++ +A  LL+ MV +   PN  T+ ++I+GL K G      R+
Sbjct: 899  PNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRL 958

Query: 355  LMSM-EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
             + +     +  N + Y+ +ISG  KE K   A  L+++M E+G  PNT  Y+ LIDG C
Sbjct: 959  FLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHC 1018

Query: 414  RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
            + G   +A E++  M N G   N  TY+S++ G  + G+  +A ++     +N    + V
Sbjct: 1019 KAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAFKLLNTGFQNQIEADGV 1078

Query: 474  CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
             Y++LI   C+   + +A +   +M   G +PD+  Y+++I   C    ++++ KLF+E+
Sbjct: 1079 TYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEV 1138

Query: 534  LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKL 593
            + L     P   TY  ++   C++  +S ++     M D GC PD ++    ++      
Sbjct: 1139 IKL--GLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISG----- 1191

Query: 594  EAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
                            L K  R     ++ + M+ K LSP   T   +  E C+ +   +
Sbjct: 1192 ----------------LCKESRLDEARQLYDTMIDKGLSPCEVTRVTLTYEYCKTEDFAS 1235

Query: 654  AI 655
            A+
Sbjct: 1236 AM 1237



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/346 (25%), Positives = 161/346 (46%), Gaps = 37/346 (10%)

Query: 310  KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            K NL++A  +++ MV             +   + KL  AVD   +++ M  +   +   +
Sbjct: 754  KCNLERAHEVVECMVG------------VFAEIGKLKEAVD---MILDMRNQGLVLTTRV 798

Query: 370  YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
             + +I    +    E A  ++ +M  +G  P++  Y  +I G CR G   EA+  + EM+
Sbjct: 799  MNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEADRWICEMM 858

Query: 430  NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
              G   +  T + ++  F E    ++AV  +  + K     N + YS +I GLC+ G ++
Sbjct: 859  ERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISGLCKRGSVK 918

Query: 490  EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            +A  +  +M+  G KP+V  ++S+IHGLC  G  E A +LF +++      +P+V TY  
Sbjct: 919  QAFELLEEMVKNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLI-RSDNYKPNVHTYTA 977

Query: 550  LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
            +++  CK+  +S +  L   M ++G  P+    N + T +        DG          
Sbjct: 978  MISGYCKEEKLSRAEMLFERMKEQGLVPNT---NTYTTLI--------DGH--------- 1017

Query: 610  LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
              K    S  ++++E+M  +   P T T+  +V  LC+  R + A 
Sbjct: 1018 -CKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEEAF 1062



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 148/331 (44%), Gaps = 7/331 (2%)

Query: 78   SYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEA 137
            +Y+    T+ ++I  Y         EM+  RM+ +  V    ++  +   + KA    +A
Sbjct: 967  NYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKA 1026

Query: 138  IRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
              L   M +E     T  ++NS+++ + + G   RA E +  +       I  + +T+ +
Sbjct: 1027 YELMELMSNEGFFPNTC-TYNSIVDGLCKRG---RAEEAFKLLNTGFQNQIEADGVTYTI 1082

Query: 198  VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
            +I   C+   ++ A+    +M     +PDI+ Y TL+   C++N + ++  L DE+   G
Sbjct: 1083 LISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIAAFCRQNMMKDSEKLFDEVIKLG 1142

Query: 258  CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
              PT  T+  +I G C+  ++  A K    M   GC P+ ++Y  LI GLC +  LD+A 
Sbjct: 1143 LAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCAPDSISYGALISGLCKESRLDEAR 1202

Query: 318  SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
             L D M+     P EVT  T+     K     D A  ++ +E     +      TLI  L
Sbjct: 1203 QLYDTMIDKGLSPCEVTRVTLTYEYCK---TEDFASAMVILERLNKKLWIRTVHTLIRKL 1259

Query: 378  FKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
              E K   A   + ++++K    + V  +A 
Sbjct: 1260 CCEKKVALAALFFHKLLDKEVNVDRVTLAAF 1290


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 210/420 (50%), Gaps = 7/420 (1%)

Query: 133 LVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           ++ +A RL H M     C R   ++  ++N   + G  H    F      A+H     + 
Sbjct: 211 MLRQARRLLHHMT-AHACARDAFTYGILVNAHCRAGQMHEVASFMEL---ARHDGCALSA 266

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           + +N +I+   R G +  A QLF     +   PD++TY  L+  LCK  +L+EA+ L  E
Sbjct: 267 VNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTY-NLLIALCKSKQLEEALTLFQE 325

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
            +  G      T++ L++   K G   +A ++  NM   GC+P+ V YN LI  L  +G 
Sbjct: 326 AEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGK 385

Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYST 372
           +D+A+ LL+ M     MP+  TY  +I+ L   GR          M+ RK   +   Y+T
Sbjct: 386 VDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNT 445

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L++GL K  + ++A  L+ +M    C P+   +  LID L + G+ ++A E    ++  G
Sbjct: 446 LLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMG 505

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
            A N++ Y++L+ GF  SG+  K  E+++DM + +C  + + Y++L+ G    G    A 
Sbjct: 506 HAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAM 565

Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
            +  +M+  G  P +  Y+ +I  L  AG VE+A  LF EM  +     PD+ TY+ L N
Sbjct: 566 ELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEM--IAKGFNPDMQTYSALPN 623



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 138/575 (24%), Positives = 268/575 (46%), Gaps = 27/575 (4%)

Query: 81  LGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIR 139
           L + T    IQ +  +GD  +   +L  MRR      +  +F        +   VE+A+ 
Sbjct: 51  LSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMT 110

Query: 140 LFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
           LF  M +   C   V ++N+++    + G   RAL+ +  +   +  +  PN ++F+ ++
Sbjct: 111 LFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRL--KQEGSCKPNAVSFDTLV 168

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
             +C++    +A+ +F+EM     + D+    TL+   C+   L +A  LL  M    C 
Sbjct: 169 IFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACA 228

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
               T+ +L+N  C+ G++   A  ++     GC  + V YN +I G    G L +A  L
Sbjct: 229 RDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQL 288

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            +  +  + +P+  TY  +I  L K  +  +   +    E+    ++ + YS L+    K
Sbjct: 289 FESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGK 347

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
            G+A  A++++  M + GC P+TVVY+ LI  L + GK DEA E+L +M   G   +  T
Sbjct: 348 AGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRT 407

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           Y+ ++      G+  KA   +  M +     + V Y+ L++GL +  +  EA  ++ +M 
Sbjct: 408 YNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQ 467

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
           +  C PD+  + ++I  L  AG +E+AL+    +  ++    P+ + YN L++  C+   
Sbjct: 468 ANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARL--VKMGHAPNSYIYNALISGFCRSGQ 525

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
           +    +L   M++  C PD +T  I                     L +   +R  TS  
Sbjct: 526 VDKGYELFQDMIECSCFPDSITYTI---------------------LVLGFSRRGHTSMA 564

Query: 620 FKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
            ++++ M+++  +P  +T+  +++ L    +++ A
Sbjct: 565 MELLQEMVREGHTPALATYNVLIRSLSMAGQVEDA 599



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 140/493 (28%), Positives = 213/493 (43%), Gaps = 81/493 (16%)

Query: 173 ALEFYNHIVNAKHMNILP-NTLTFNLVIKTVCRLGL------------------------ 207
           AL  Y H++ A     LP +  T   ++K VC+LG                         
Sbjct: 2   ALATYKHLLKAG----LPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCT 57

Query: 208 -----------VDNAIQLFREMPVRN-CEPDIYTYCTLMDGLCKENRLDEAVLLLDEM-Q 254
                      +D A+ +  +M   N C+PD   +   M  LC+  R+++A+ L D+M +
Sbjct: 58  ECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRE 117

Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG-CLPNEVTY------------- 300
              C P  V +N LI G CK G+  RA  +   +  +G C PN V++             
Sbjct: 118 TCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRA 177

Query: 301 ----------------------NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
                                 NTLIH  C  G L +A  LL  M A  C  +  TYG +
Sbjct: 178 TDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGIL 237

Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
           +N   + G+  + A  +         ++   Y+ +I G  + G+  +A +L++  M K  
Sbjct: 238 VNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKES 297

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+   Y+ LI  LC+  + +EA  +  E    G   + FTYS LM  F ++G+  KA+E
Sbjct: 298 VPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALE 356

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           ++ +M K  C+ + V Y+VLI  L + GK+ EA  +   M  +G  PD   Y+ +I  L 
Sbjct: 357 VFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLS 416

Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           + G  E+A   F  M     K  PDV TYN LLN L K      + DL + M    C PD
Sbjct: 417 SCGRYEKAYSFFGMM--KRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPD 474

Query: 579 LVTCNIFLTALKE 591
           L T    +  L +
Sbjct: 475 LTTFGTLIDTLAK 487



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 206/435 (47%), Gaps = 33/435 (7%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D +T   ++  +CK  R +    LL E++  G   + VT    I    + G+L  A  ++
Sbjct: 17  DAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMGML 76

Query: 286 DNMFLKG--CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS-KCMPNEVTYGTIINGL 342
           D+M  +G  C P+ V +   +H LC    +++A++L D M  +  C P+ V Y T+I G 
Sbjct: 77  DDM-RRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDCAPDVVAYNTLIAGY 135

Query: 343 VKLG---RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
            K G   RA+D  R L   +E     N   + TL+  L K  +A DA+ ++++M+  G K
Sbjct: 136 CKAGDGDRALDMFRRLK--QEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLK 193

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
            +  V + LI   CR+G   +A  +L  M  + CA +AFTY  L+     +G+ H+    
Sbjct: 194 ADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVASF 253

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            +    + C  + V Y+ +I G    G+L EA  ++   +++   PDV  Y+ +I  LC 
Sbjct: 254 MELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCK 312

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           +  +EEAL LF E    +     DVFTY+ L++A  K    + ++++  +M   GC PD 
Sbjct: 313 SKQLEEALTLFQE--AEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDT 370

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
           V  N+ ++ L                      K+ +     +++E M +K + P   T+ 
Sbjct: 371 VVYNVLISCLG---------------------KQGKVDEALELLEDMNRKGIMPDCRTYN 409

Query: 640 RVVQELCRPKRIQAA 654
            V+  L    R + A
Sbjct: 410 IVIDVLSSCGRYEKA 424


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 210/435 (48%), Gaps = 37/435 (8%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  ++N+VI  + R G   +A+++F EM  R   P+  TY T++DG  K   L+    L
Sbjct: 194 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSL 253

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M   G  P  +T+NVL++GLC+ G +G  + L+D M  +  +P+  TY+ L  GL  
Sbjct: 254 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 313

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+    +SL  + + +     + T   ++NGL K G+      VL S+          I
Sbjct: 314 NGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 373

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  + G+ E A   + QM  +  KP+ + Y+ALI+GLC+  +   A+++L EM 
Sbjct: 374 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 433

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +NG      T+++L+  +  +G+  K   +  +M +N    N V Y  +++  C++GK+ 
Sbjct: 434 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 493

Query: 490 EARMVWTQML-----------------------------------SRGCKPDVVAYSSMI 514
           EA  +   M                                    S G  P +V Y+ +I
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GLCN   + EA ++ N +     +  PD  +YN L++A C + NI  ++DL   M   G
Sbjct: 554 KGLCNQSQISEAEEIINSLS--NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 611

Query: 575 CDPDLVTCNIFLTAL 589
               + T +  ++ L
Sbjct: 612 IKSTVRTYHQLISGL 626



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 236/500 (47%), Gaps = 7/500 (1%)

Query: 90  IQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           +Q    +GD      +L RM R+        S+  +     +A    +A+ +F  M +  
Sbjct: 167 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 226

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
                + ++N++++  I+ G         + +V      + PN +T+N+++  +CR G +
Sbjct: 227 VLPNHI-TYNTMIDGHIKGGDLEAGFSLRDQMVC---HGLKPNAITYNVLLSGLCRAGRM 282

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
                L  EM  +   PD +TY  L DGL +       + L  +   +G      T ++L
Sbjct: 283 GETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSIL 342

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           +NGLCK+G++  A +++ ++   G +P  V YNTLI+G C  G L+ A S   +M +   
Sbjct: 343 LNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHI 402

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+ +TY  +INGL K  R  +   +LM M++   +     ++TLI    + G+ E    
Sbjct: 403 KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 462

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           +  +M E G KPN V Y ++++  C+ GK  EA  IL +M +     NA  Y++++  + 
Sbjct: 463 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 522

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           E G   +A  + + M  N    + V Y++LI GLC   ++ EA  +   + +    PD V
Sbjct: 523 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 582

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +Y+++I   C  G++++AL L   M     KS   V TY+ L++ L     +     L  
Sbjct: 583 SYNTLISACCYRGNIDKALDLQQRMHKYGIKST--VRTYHQLISGLGGAGRLIEMEYLYQ 640

Query: 569 SMMDRGCDPDLVTCNIFLTA 588
            MM     P     NI + A
Sbjct: 641 KMMQNNVVPSNAIHNIMVEA 660



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 125/467 (26%), Positives = 222/467 (47%), Gaps = 24/467 (5%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP+  + NL+++ +  LG   +  + F  +      PD + +   +        L EAV 
Sbjct: 122 LPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVG 181

Query: 249 LLDEMQVDGCFP-TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           +L  M  DG  P    ++NV+I G+ + G  G A ++ D M  +  LPN +TYNT+I G 
Sbjct: 182 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 241

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
              G+L+   SL D+MV     PN +TY  +++GL + GR  + + +L  M  +K   + 
Sbjct: 242 IKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 301

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + YS L  GL + G ++  + L+ + ++ G        S L++GLC+ GK   AEE+L  
Sbjct: 302 FTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 361

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           ++N G       Y++L+ G+ ++G+   A   +  M   +   + + Y+ LI+GLC+  +
Sbjct: 362 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 421

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A+ +  +M   G  P V  ++++I      G +E+   + +EM   E   +P+V +Y
Sbjct: 422 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ--ENGLKPNVVSY 479

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
             ++NA CK   I  ++ +L+ M  +   P+    N  + A  E    P D         
Sbjct: 480 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE--HGPNDQA------- 530

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                       F +VE M    +SP   T+  +++ LC   +I  A
Sbjct: 531 ------------FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 565



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 172/375 (45%), Gaps = 38/375 (10%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +LN + ++G    A E    +VNA    ++P  + +N +I   C+ G ++ A   F +M 
Sbjct: 342 LLNGLCKDGKVSIAEEVLQSLVNA---GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 398

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
            R+ +PD  TY  L++GLCK  R+  A  LL EMQ +G  PT  TFN LI+   + G+L 
Sbjct: 399 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 458

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           +   ++  M   G  PN V+Y ++++  C  G + +AV++LD M     +PN   Y  II
Sbjct: 459 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 518

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +  V                                   + G  + A  L ++M   G  
Sbjct: 519 DAYV-----------------------------------EHGPNDQAFILVEKMKSNGIS 543

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+ V Y+ LI GLC   +  EAEEI+  + N+    +A +Y++L+      G   KA+++
Sbjct: 544 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 603

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            + M K         Y  LI GL   G+L E   ++ +M+     P    ++ M+     
Sbjct: 604 QQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 663

Query: 520 AGSVEEALKLFNEML 534
            G+  +A  L  EML
Sbjct: 664 YGNEIKAEDLRKEML 678



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 120/278 (43%), Gaps = 4/278 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI     +    + + +L  M+        ++F  +  AYG+   +E+   +   M
Sbjct: 408 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 467

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E   K  V S+ S++N   + G    A+   + +    H ++LPN   +N +I     
Sbjct: 468 -QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF---HKDVLPNAQVYNAIIDAYVE 523

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G  D A  L  +M      P I TY  L+ GLC ++++ EA  +++ +      P  V+
Sbjct: 524 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 583

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+  C  G + +A  L   M   G      TY+ LI GL   G L +   L  +M+
Sbjct: 584 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMM 643

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
            +  +P+   +  ++    K G  +    +   M +++
Sbjct: 644 QNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 681


>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 533

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 222/447 (49%), Gaps = 41/447 (9%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVL--EKSFIFIFKAYGKAHLVEEAIRLFH 142
           T++S++   + +  F  +E ++  +R     +   E  FI + + YG A   E ++R+F 
Sbjct: 83  TYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFL 142

Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
            + D F  KR+V+S N++LNV+IQ   +      + +  + +   I PN  T NL++K  
Sbjct: 143 RIPD-FGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKN--SKESFGITPNIFTCNLLVK-- 197

Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
                                             LCK+N ++ A  +LDE+   G  P  
Sbjct: 198 ---------------------------------ALCKKNDIESAYKVLDEIPAMGLVPNL 224

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
           VT+  ++ G    G++  A ++++ M  +G  P+ +TY  L+ G C  G   +A +++D 
Sbjct: 225 VTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDD 284

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M  ++  PNEVTYG +I  L K  ++ +   +   M +R F  +  +   +I  L ++ K
Sbjct: 285 MEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHK 344

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
            ++A  LW++M++  C P+  + S LI  LC+ G+  EA + LF+  + G   +  TY++
Sbjct: 345 VDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARK-LFDEFDKGSIPSLLTYNT 403

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           L+ G  E G+  +A  +W DM +  C  N   Y+VLI GL ++G ++E   V  +ML  G
Sbjct: 404 LIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESG 463

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKL 529
           C P+   +  +  GL   G  E+A+K+
Sbjct: 464 CFPNKTTFLILFEGLQKLGKEEDAIKI 490



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/341 (31%), Positives = 175/341 (51%), Gaps = 13/341 (3%)

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLK-----GCLPNEVTYNTLIHGLCLKGNLDKAVS 318
           + N L+N L +N        LV  MF       G  PN  T N L+  LC K +++ A  
Sbjct: 155 SLNTLLNVLIQNQRF----DLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYK 210

Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
           +LD + A   +PN VTY TI+ G V  G      RVL  M +R ++ +   Y+ L+ G  
Sbjct: 211 VLDEIPAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYC 270

Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
           K G+  +A  +   M +   +PN V Y  +I  LC+  K  EA  +  EM++     ++ 
Sbjct: 271 KLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSS 330

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
               ++    E  K  +A  +W+ M KNNC+ +    S LIH LC++G++ EAR ++ + 
Sbjct: 331 LCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDE- 389

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
             +G  P ++ Y+++I G+C  G + EA +L+++M   E K +P+ FTYN+L+  L K  
Sbjct: 390 FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDM--FERKCKPNAFTYNVLIEGLSKNG 447

Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
           N+   + +L  M++ GC P+  T  I    L +KL   +D 
Sbjct: 448 NVKEGVRVLEEMLESGCFPNKTTFLILFEGL-QKLGKEEDA 487


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 150/570 (26%), Positives = 260/570 (45%), Gaps = 62/570 (10%)

Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
           F  + + Y +  ++++++ +F  M   +    +V + N++L  I++         F   +
Sbjct: 126 FDILIRVYLREGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEM 184

Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
           +  K   I P+  TFN++I  +C  G    +  L ++M      P I TY T++   CK+
Sbjct: 185 LKRK---ICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
            R   A+ LLD M + G      T+N+LI+ LC++    +   L+ +M  +   PNEVTY
Sbjct: 242 GRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTY 301

Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME- 359
           NTL++G   +G +  A  LL+ M+     PN VT+  +I+G +  G   +  ++   ME 
Sbjct: 302 NTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEA 361

Query: 360 -------------------------ERKFH---------VNEYIYSTLISGLFKEGKAED 385
                                     R F+         V    Y+ +I GL K G  ++
Sbjct: 362 KGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
           A+ +  +M + G  P+ V YSALI+G CRVG+   A+EI+  +   G + N   YS+L+ 
Sbjct: 422 AVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIY 481

Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
                G   + + I++ M       +   ++VL+  LC+ GK+ EA      M S G  P
Sbjct: 482 NCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILP 541

Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
           + V++  +I+G  ++G   +A  +F+EM   +    P  FTY  LL  LCK  ++  +  
Sbjct: 542 NAVSFDCLINGYGSSGEGLKAFSVFDEM--TKVGHHPTFFTYGSLLKGLCKGGHLIAAEK 599

Query: 566 LLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEV 625
            L S+ +     D V CN  +TA+ +     +         A+ LF              
Sbjct: 600 FLKSLQNVPAAVDTVMCNTLITAMCKSGNLDK---------AVSLFGE------------ 638

Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           M+Q+ + P + T+  ++  LCR  +   AI
Sbjct: 639 MVQRSILPDSFTYTSLISGLCRKGKTVIAI 668



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 227/499 (45%), Gaps = 58/499 (11%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N   F+++I+   R G++ +++++FR M +    P +YT   ++  + K          L
Sbjct: 122 NPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFL 181

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM      P   TFN+LIN LC  G   +++ L+  M   G  P  VTYNT++H  C K
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
           G    A+ LLD M       +  TY  +I+ L +  R+  G  +L  M +R  H NE  Y
Sbjct: 242 GRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTY 301

Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI--------------------- 409
           +TL++G   EGK   A +L  +M+  G  PN V ++ALI                     
Sbjct: 302 NTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEA 361

Query: 410 --------------DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
                         DGLC+  + D A      M  NG      TY+ ++ G  ++G   +
Sbjct: 362 KGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           AV +  +M+K+    + V YS LI+G C  G+L+ A+ +  ++   G  P+ + YS++I+
Sbjct: 422 AVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIY 481

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
             C  G ++E ++++  M+ LE  + PD FT+N+L+ +LCK   ++ + + +  M   G 
Sbjct: 482 NCCRMGCLKETIRIYEAMI-LEGNT-PDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGI 539

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
            P+ V+ +  +       E  +                      F + + M +    P  
Sbjct: 540 LPNAVSFDCLINGYGSSGEGLK---------------------AFSVFDEMTKVGHHPTF 578

Query: 636 STWERVVQELCRPKRIQAA 654
            T+  +++ LC+   + AA
Sbjct: 579 FTYGSLLKGLCKGGHLIAA 597



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 220/514 (42%), Gaps = 18/514 (3%)

Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
           ++N++LN    EG    A +  N ++      + PN +TFN +I      G    A+++F
Sbjct: 300 TYNTLLNGFSNEGKVLIARQLLNEMLT---FGLSPNHVTFNALIDGHISEGNFKEALKMF 356

Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
             M  +       +Y  L+DGLCK    D A      M+ +G     +T+  +I+GLCKN
Sbjct: 357 HMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416

Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
           G L  A  +++ M   G  P+ VTY+ LI+G C  G L  A  ++ R+      PN + Y
Sbjct: 417 GFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIY 476

Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
            T+I    ++G   +  R+  +M       + + ++ L++ L K GK  +A +  + M  
Sbjct: 477 STLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536

Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
            G  PN V +  LI+G    G+  +A  +  EM   G     FTY SL+KG  + G    
Sbjct: 537 DGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIA 596

Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           A +  K +       + V  + LI  +C+ G L +A  ++ +M+ R   PD   Y+S+I 
Sbjct: 597 AEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLIS 656

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           GLC  G    A+ LF +         P+   Y   ++ + K             M   G 
Sbjct: 657 GLCRKGKTVIAI-LFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGL 715

Query: 576 DPDLVTCNIFLTALKE--KLEAPQD----------GTDF--LNELAIRLFKRQRTSGGFK 621
             D+VT N  +       K+E   D          G +    N L     KR+  S  F 
Sbjct: 716 TRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFM 775

Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
           +   M+   + P   T   ++  +C    ++  +
Sbjct: 776 LYRSMILSGILPDKLTCYSIILGICESNMLEIGL 809



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 145/608 (23%), Positives = 248/608 (40%), Gaps = 92/608 (15%)

Query: 85   TFYSLIQHYANSGDFKSLEMV---LYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
            T+ +LI  +   G  K+ + +   +YR+      ++  + I+     G    ++E IR++
Sbjct: 440  TYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG---CLKETIRIY 496

Query: 142  HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
              M+ E +      +FN ++  + + G    A EF   + +     ILPN ++F+ +I  
Sbjct: 497  EAMILEGNTPDHF-TFNVLVTSLCKAGKVAEAEEFMRCMTSD---GILPNAVSFDCLING 552

Query: 202  VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
                G    A  +F EM      P  +TY +L+ GLCK   L  A   L  +Q       
Sbjct: 553  YGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVD 612

Query: 262  PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
             V  N LI  +CK+G L +A  L   M  +  LP+  TY +LI GLC KG    A+    
Sbjct: 613  TVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAK 672

Query: 322  RMVA-SKCMPNEVTYGTIINGLVKLGR-------------------------AVDGAR-- 353
               A    +PN+V Y   ++G+ K G+                          +DG    
Sbjct: 673  EAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRM 732

Query: 354  --------VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
                    +L  M  +    N   Y+ L+ G  K      +  L++ M+  G  P+ +  
Sbjct: 733  GKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTC 792

Query: 406  SALIDGLCR--------------VGKPDEAEEILFEMINNGCAAN-----AFTYSSLMKG 446
             ++I G+C               + +  E +   F M+ + C AN     AF   ++M  
Sbjct: 793  YSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTS 852

Query: 447  FFES-------------GKGHKAVE---IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
               S              + H+  E   +  +M+K         Y  L++GLC  G ++ 
Sbjct: 853  LGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKT 912

Query: 491  ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
            A +V  +M++    P  VA S+M+  L   G  +EA  L   ML  + K  P + ++  L
Sbjct: 913  AFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSML--KMKLVPTIASFTTL 970

Query: 551  LNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRL 610
            ++  CK  N++ +++L   M + G   DLV+ N+ +T L  K +           +A  L
Sbjct: 971  MHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMA---------IAFEL 1021

Query: 611  FKRQRTSG 618
            F+  +  G
Sbjct: 1022 FEEMKRDG 1029



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 162/338 (47%), Gaps = 2/338 (0%)

Query: 186  MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
            + +  + +T N +I    R+G ++    L  EM  +N  P++ TY  L+ G  K   +  
Sbjct: 713  LGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVST 772

Query: 246  AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
            + +L   M + G  P  +T   +I G+C++  L    K++     +G   +  T+N LI 
Sbjct: 773  SFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLIS 832

Query: 306  GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
              C  G ++ A  +++ M +     ++ T   I++ L +  R  +   VL  M ++    
Sbjct: 833  KCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISP 892

Query: 366  NEYIYSTLISGLFKEGKAEDAMKLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
                Y  L++GL + G  + A  + ++M+  K C PN V  SA++  L + GK DEA  +
Sbjct: 893  ESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPN-VAESAMVRALAKCGKADEASLL 951

Query: 425  LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
            L  M+         ++++LM  F ++G   +A+E+   M+      + V Y+VLI GLC 
Sbjct: 952  LRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCA 1011

Query: 485  DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
             G +  A  ++ +M   G   +V  Y +++ G+ + G+
Sbjct: 1012 KGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGT 1049



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 150/354 (42%), Gaps = 38/354 (10%)

Query: 141  FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
            F   +D+    R V + N++++   + G   +    ++ +    + N  PN  T+N+++ 
Sbjct: 706  FRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKT---HDLLFEMGNQNQGPNLTTYNILLH 762

Query: 201  TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
               +   V  +  L+R M +    PD  T  +++ G+C+ N L+  + +L      G   
Sbjct: 763  GYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEV 822

Query: 261  TPVTFNVLINGLCKNGELGRAAKLVD---------------------------------- 286
               TFN+LI+  C NGE+  A  +V+                                  
Sbjct: 823  DRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVL 882

Query: 287  -NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
              M  +G  P    Y  L++GLC  G++  A  + + M+A K  P  V    ++  L K 
Sbjct: 883  HEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKC 942

Query: 346  GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
            G+A + + +L SM + K       ++TL+    K G   +A++L   M   G K + V Y
Sbjct: 943  GKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSY 1002

Query: 406  SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
            + LI GLC  G    A E+  EM  +G  AN  TY +L+ G    G      +I
Sbjct: 1003 NVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDI 1056



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 75/350 (21%), Positives = 144/350 (41%), Gaps = 24/350 (6%)

Query: 88   SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV-- 145
            ++I  Y+  G  +    +L+ M  + +     ++  +   Y K   V  +  L+ +M+  
Sbjct: 724  AMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILS 783

Query: 146  ----DEFHCKRTV----KSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNL 197
                D+  C   +    +S    + + I +    R +E   H              TFN+
Sbjct: 784  GILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRH--------------TFNM 829

Query: 198  VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
            +I   C  G ++ A  +   M       D  T   ++  L + +R  E+ ++L EM   G
Sbjct: 830  LISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQG 889

Query: 258  CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
              P    +  L+NGLC+ G++  A  + + M      P  V  + ++  L   G  D+A 
Sbjct: 890  ISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEAS 949

Query: 318  SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
             LL  M+  K +P   ++ T+++   K G   +   + + M      ++   Y+ LI+GL
Sbjct: 950  LLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGL 1009

Query: 378  FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
              +G    A +L+++M   G   N   Y AL+ G+   G      +I+ +
Sbjct: 1010 CAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILK 1059



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 4/217 (1%)

Query: 124  IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
            I     + H  +E+  + H M  +     + K +  +LN + + G    A      ++  
Sbjct: 865  IVSVLNRNHRFQESRMVLHEMSKQGISPESRK-YIGLLNGLCRVGDIKTAFVVKEEMIAH 923

Query: 184  KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
            K   I P  +  + +++ + + G  D A  L R M      P I ++ TLM   CK   +
Sbjct: 924  K---ICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNV 980

Query: 244  DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
             EA+ L   M   G     V++NVLI GLC  G++  A +L + M   G L N  TY  L
Sbjct: 981  TEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKAL 1040

Query: 304  IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
            + G+  +G       ++ + + ++     +++  +IN
Sbjct: 1041 VGGILSQGTEFSGTDIILKDLLARGFITAMSFNHMIN 1077


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 210/435 (48%), Gaps = 37/435 (8%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN  ++N+VI  + R G   +A+++F EM  R   P+  TY T++DG  K   L+    L
Sbjct: 198 PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 257

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            D+M   G  P  +T+NVL++GLC+ G +G  + L+D M  +  +P+  TY+ L  GL  
Sbjct: 258 RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 317

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            G+    +SL  + + +     + T   ++NGL K G+      VL S+          I
Sbjct: 318 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 377

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+TLI+G  + G+ E A   + QM  +  KP+ + Y+ALI+GLC+  +   A+++L EM 
Sbjct: 378 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 437

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
           +NG      T+++L+  +  +G+  K   +  +M +N    N V Y  +++  C++GK+ 
Sbjct: 438 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 497

Query: 490 EARMVWTQML-----------------------------------SRGCKPDVVAYSSMI 514
           EA  +   M                                    S G  P +V Y+ +I
Sbjct: 498 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 557

Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
            GLCN   + EA ++ N +     +  PD  +YN L++A C + NI  ++DL   M   G
Sbjct: 558 KGLCNQSQISEAEEIINSLS--NHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYG 615

Query: 575 CDPDLVTCNIFLTAL 589
               + T +  ++ L
Sbjct: 616 IKSTVRTYHQLISGL 630



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/500 (27%), Positives = 237/500 (47%), Gaps = 7/500 (1%)

Query: 90  IQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIFIFKAYGKAHLVEEAIRLFHTMVDEF 148
           +Q    +GD      +L RM R+        S+  +     +A    +A+ +F  M +  
Sbjct: 171 VQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERA 230

Query: 149 HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLV 208
                + ++N++++  I+ G         + +V      + PN +T+N+++  +CR G +
Sbjct: 231 VLPNHI-TYNTMIDGHIKGGDLEAGFRLRDQMVC---HGLKPNAITYNVLLSGLCRAGRM 286

Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
                L  EM  +   PD +TY  L DGL +       + L  +   +G      T ++L
Sbjct: 287 GETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSIL 346

Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
           +NGLCK+G++  A +++ ++   G +P  V YNTLI+G C  G L+ A S   +M +   
Sbjct: 347 LNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHI 406

Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
            P+ +TY  +INGL K  R  +   +LM M++   +     ++TLI    + G+ E    
Sbjct: 407 KPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFI 466

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           +  +M E G KPN V Y ++++  C+ GK  EA  IL +M +     NA  Y++++  + 
Sbjct: 467 VLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYV 526

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
           E G   +A  + + M  N    + V Y++LI GLC   ++ EA  +   + +    PD V
Sbjct: 527 EHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAV 586

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
           +Y+++I   C  G++++AL L   M     KS   V TY+ L++ L     ++    L  
Sbjct: 587 SYNTLISACCYRGNIDKALDLQQRMHKYGIKST--VRTYHQLISGLGGAGRLNEMEYLYQ 644

Query: 569 SMMDRGCDPDLVTCNIFLTA 588
            MM     P     NI + A
Sbjct: 645 KMMQNNVVPSNAIHNIMVEA 664



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 221/467 (47%), Gaps = 24/467 (5%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           LP+  + NL+++ +  LG   +  + F  +      PD + +   +        L EAV 
Sbjct: 126 LPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVG 185

Query: 249 LLDEMQVDGCFP-TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
           +L  M  DG  P    ++NV+I G+ + G  G A ++ D M  +  LPN +TYNT+I G 
Sbjct: 186 MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 245

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
              G+L+    L D+MV     PN +TY  +++GL + GR  + + +L  M  +K   + 
Sbjct: 246 IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDG 305

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
           + YS L  GL + G ++  + L+ + ++ G        S L++GLC+ GK   AEE+L  
Sbjct: 306 FTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 365

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           ++N G       Y++L+ G+ ++G+   A   +  M   +   + + Y+ LI+GLC+  +
Sbjct: 366 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 425

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
           +  A+ +  +M   G  P V  ++++I      G +E+   + +EM   E   +P+V +Y
Sbjct: 426 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQ--ENGLKPNVVSY 483

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELA 607
             ++NA CK   I  ++ +L+ M  +   P+    N  + A  E    P D         
Sbjct: 484 GSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE--HGPNDQA------- 534

Query: 608 IRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                       F +VE M    +SP   T+  +++ LC   +I  A
Sbjct: 535 ------------FILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEA 569



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 172/375 (45%), Gaps = 38/375 (10%)

Query: 160 VLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
           +LN + ++G    A E    +VNA    ++P  + +N +I   C+ G ++ A   F +M 
Sbjct: 346 LLNGLCKDGKVSIAEEVLQSLVNA---GLVPTRVIYNTLINGYCQTGELEGAFSTFGQMK 402

Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
            R+ +PD  TY  L++GLCK  R+  A  LL EMQ +G  PT  TFN LI+   + G+L 
Sbjct: 403 SRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLE 462

Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           +   ++  M   G  PN V+Y ++++  C  G + +AV++LD M     +PN   Y  II
Sbjct: 463 KCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAII 522

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +  V                                   + G  + A  L ++M   G  
Sbjct: 523 DAYV-----------------------------------EHGPNDQAFILVEKMKSNGIS 547

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+ V Y+ LI GLC   +  EAEEI+  + N+    +A +Y++L+      G   KA+++
Sbjct: 548 PSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 607

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            + M K         Y  LI GL   G+L E   ++ +M+     P    ++ M+     
Sbjct: 608 QQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSK 667

Query: 520 AGSVEEALKLFNEML 534
            G+  +A  L  EML
Sbjct: 668 YGNEIKAEDLRKEML 682



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 4/278 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI     +    + + +L  M+        ++F  +  AYG+   +E+   +   M
Sbjct: 412 TYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEM 471

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             E   K  V S+ S++N   + G    A+   + +    H ++LPN   +N +I     
Sbjct: 472 -QENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF---HKDVLPNAQVYNAIIDAYVE 527

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G  D A  L  +M      P I TY  L+ GLC ++++ EA  +++ +      P  V+
Sbjct: 528 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 587

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N LI+  C  G + +A  L   M   G      TY+ LI GL   G L++   L  +M+
Sbjct: 588 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 647

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
            +  +P+   +  ++    K G  +    +   M +++
Sbjct: 648 QNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKR 685


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 233/490 (47%), Gaps = 43/490 (8%)

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            I KA  +   V++A+  FH++         V S+ +++  +   G    A E +  + +
Sbjct: 44  IILKALCERKEVDQALSYFHSV--SPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSS 101

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
           +    ++  T   N + K        D AI  F  M  R C+PD+ T+  ++ GLCK  +
Sbjct: 102 SGSQCVVAYTAIINALFKA----HRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGK 157

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           L+ A  +  EM   G  P  + +  L++GL K   +  A KL+  +  +G  P EVTY +
Sbjct: 158 LNRACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTS 217

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
            I GLC  G +++A  L+  M   K    EV +  I  G V  G+  +   +   M ++ 
Sbjct: 218 FISGLCKNGRVEEAGKLVREM--GKMCAAEVLH-CIFGGYVLEGKIEEALTLKDEMVKKG 274

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
             ++   Y+ LI GLF   + ++A ++++ M+ +GC P+T  Y  ++   C+ GK   A 
Sbjct: 275 VTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAAC 334

Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
           +++  M   G  AN   Y+SLM GF    +  +A+ ++  M +     + V Y++L+ GL
Sbjct: 335 KVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGL 394

Query: 483 CEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML------- 534
           C+ G+  +AR+V  +M  R G  P +V+Y ++IHGL  AG  +EA+ +F EM+       
Sbjct: 395 CKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPD 454

Query: 535 ---C------------LEPKSQ-----------PDVFTYNILLNALCKQSNISHSIDLLN 568
              C            ++  +Q           PD   YN L+  LC  + +  + D+L 
Sbjct: 455 CPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLV 514

Query: 569 SMMDRGCDPD 578
            MMD  C PD
Sbjct: 515 EMMDNSCVPD 524



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/464 (27%), Positives = 221/464 (47%), Gaps = 40/464 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           S+  +      +  ++ A  LF  M       + V ++ +++N + +     +A+  +  
Sbjct: 75  SYTTLIMGLADSGRIDVACELFEEMSSSG--SQCVVAYTAIINALFKAHRPDQAIACFER 132

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +V  K     P+  TF +VI  +C+ G ++ A ++F+EM  +  +PDI  Y +L+DGL K
Sbjct: 133 MVARK---CDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLVDGLSK 189

Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV-------------- 285
            + +DEA  LL E+   G  PT VT+   I+GLCKNG +  A KLV              
Sbjct: 190 ASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHC 249

Query: 286 ------------------DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
                             D M  KG   +   Y  LIHGL      D+A  + + MV   
Sbjct: 250 IFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQG 309

Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
           C+P+  TYG I++   K G+     +V+  M+      N ++Y++L+ G     +A +A+
Sbjct: 310 CVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAI 369

Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI-NNGCAANAFTYSSLMKG 446
            ++  M+ K  KP+ V Y+ L+ GLC++G+  +A  +L EM   +G      +Y +L+ G
Sbjct: 370 NVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHG 429

Query: 447 FFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
             ++G+  +A++++ +M  N  V +    + LI  L    ++ EA  +   M   G  PD
Sbjct: 430 LGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPD 489

Query: 507 VVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
            +AY++++  LC    V  A  +  EM  ++    PD  T+  +
Sbjct: 490 ALAYNALVKVLCGGAKVGPAWDVLVEM--MDNSCVPDGSTFRAM 531



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 206/428 (48%), Gaps = 40/428 (9%)

Query: 226 DIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLV 285
           D+ +Y  ++ GLC   R   A  LL EM+  G   + VT  +++  LC+  E+ +A    
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA--SKCMPNEVTYGTIINGLV 343
            ++  +  L + V+Y TLI GL   G +D A  L + M +  S+C+   V Y  IIN L 
Sbjct: 63  HSVSPRSDL-DVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQCV---VAYTAIINALF 118

Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
           K  R          M  RK   +   ++ +I+GL K GK   A +++++M  KG KP+ +
Sbjct: 119 KAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDII 178

Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           VY++L+DGL +    DEA ++L E+++ G      TY+S + G  ++G+  +A ++ ++M
Sbjct: 179 VYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM 238

Query: 464 AKNNCVYNEVCYSVLIH----GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
            K       +C + ++H    G   +GK+ EA  +  +M+ +G   DV  Y+++IHGL  
Sbjct: 239 GK-------MCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFY 291

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
               +EA ++F  M  +     PD  TY ++++  CKQ  +  +  ++  M   G + + 
Sbjct: 292 VRRNDEAQEMFEAM--VRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEAN- 348

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
             C+++                  N L        R      +   ML+K + P   T+ 
Sbjct: 349 --CHVY------------------NSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYN 388

Query: 640 RVVQELCR 647
            ++  LC+
Sbjct: 389 ILMLGLCK 396



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 171/358 (47%), Gaps = 32/358 (8%)

Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
           +YN +I GLCL G   +A  LL  M A     ++VT+G I+  L +  + VD A      
Sbjct: 6   SYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCER-KEVDQALSYFHS 64

Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
              +  ++   Y+TLI GL   G+ + A +L+++M   G +   V Y+A+I+ L +  +P
Sbjct: 65  VSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQ-CVVAYTAIINALFKAHRP 123

Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
           D+A      M+   C  +  T++ ++ G  ++GK ++A E++++M +     + + Y+ L
Sbjct: 124 DQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSL 183

Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM--LCL 536
           + GL +   + EAR +  +++SRG KP  V Y+S I GLC  G VEEA KL  EM  +C 
Sbjct: 184 VDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKMCA 243

Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
                      + +      +  I  ++ L + M+ +G   D V C              
Sbjct: 244 AE-------VLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLD-VRC-------------- 281

Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                    L   LF  +R     ++ E M+++   P T T+  +V   C+  ++QAA
Sbjct: 282 ------YTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAA 333



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 175/428 (40%), Gaps = 101/428 (23%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF--- 176
           ++  I  A  KAH  ++AI  F  MV    C   +++F  V+  + + G  +RA E    
Sbjct: 109 AYTAIINALFKAHRPDQAIACFERMVAR-KCDPDLRTFTVVITGLCKAGKLNRACEVFQE 167

Query: 177 ------------YNHIVN----AKHMN-------------ILPNTLTFNLVIKTVCRLGL 207
                       Y  +V+    A  M+             + P  +T+   I  +C+ G 
Sbjct: 168 MNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGR 227

Query: 208 VDNAIQLFREM------PVRNC--------------------------EPDIYTYCTLMD 235
           V+ A +L REM       V +C                            D+  Y  L+ 
Sbjct: 228 VEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIH 287

Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
           GL    R DEA  + + M   GC P   T+ ++++  CK G++  A K+V+ M   G   
Sbjct: 288 GLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEA 347

Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
           N   YN+L+ G        +A+++   M+     P+ VTY  ++ GL KLG+  D   VL
Sbjct: 348 NCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVL 407

Query: 356 MSMEERKFHVNEYI-YSTLISGLFKEGKAEDAMKLWKQMMEKGC---------------- 398
             M ER   V   + Y TLI GL K G+A++A+ ++ +M++ G                 
Sbjct: 408 REMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAM 467

Query: 399 -------------------KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
                               P+ + Y+AL+  LC   K   A ++L EM++N C  +  T
Sbjct: 468 ADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEMMDNSCVPDGST 527

Query: 440 YSSLMKGF 447
           + ++  GF
Sbjct: 528 FRAMKLGF 535


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 161/647 (24%), Positives = 300/647 (46%), Gaps = 64/647 (9%)

Query: 2   RKWSLPHTKILLTITNSAMKMKTLSLTTIPSERSHRFFS---VRSAVSSNKQ-----MET 53
           RKWS    ++LLT  N  + ++ L++  +  E + RFF+    +S V  ++Q     +E 
Sbjct: 108 RKWSSHQFRLLLTDPN--LLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEI 165

Query: 54  EPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREK 113
             + +  SE     E    +  LG +++ D                  L  V  +    +
Sbjct: 166 LAENDLMSEAYLVAE---RSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLWVYTKKSMAE 222

Query: 114 RVVL------EKSFI-------FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSV 160
           + +L       K F+        + K    + ++ +A  ++ TM+ E     TV +FN++
Sbjct: 223 KFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMI-EHGIMPTVITFNTM 281

Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
           L+   + G   R  + +   +  K  NI  + +T+N++I    + G ++ A +   +M  
Sbjct: 282 LDSCFKAGDLERVDKIW---LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRR 338

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
                  Y++  L++G CK+   D+A  + DEM   G +PT  T+N+ I  LC  G +  
Sbjct: 339 SGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDD 398

Query: 281 AAKLVDNM--------------------FLKGCL-----------PNEVTYNTLIHGLCL 309
           A +L+ +M                    F++  L           P+ VTYNTLI GLC 
Sbjct: 399 ARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCE 458

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
            GNL+ A  L + M      P+ +TY T++ G VK G       V   M  +    + Y 
Sbjct: 459 SGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYA 518

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCK-PNTVVYSALIDGLCRVGKPDEAEEILFEM 428
           Y+T   G  + G ++ A +L ++M+      P+  +Y+  IDGLC+VG   +A E   ++
Sbjct: 519 YTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKI 578

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
              G   +  TY+++++G+ E+G+   A  ++ +M +     + + Y VLI+G  + G+L
Sbjct: 579 FRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRL 638

Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
            +A    T+M  RG +P+V+ ++++++G+C AG+++EA +   +M   E    P+ ++Y 
Sbjct: 639 EQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM--EEEGIPPNKYSYT 696

Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEA 595
           +L++  C        + L   M+D+  +PD  T       L++  E+
Sbjct: 697 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 743


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 156/568 (27%), Positives = 257/568 (45%), Gaps = 61/568 (10%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI    N G     E     M R K      SF  I  +Y     + EA  ++  M
Sbjct: 419 TYSALI----NEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSYCHRGNIVEAFTVYDAM 474

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI----LPNTL---TFNL 197
           V   H    V ++ ++L  + Q G          H+V AK        +P+ +   TFN 
Sbjct: 475 VRYGHSP-NVCTYQNLLRGLCQGG----------HLVQAKQFMFCLLDIPSAIDEKTFNA 523

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           ++  +C+ G +D A+ L  +M   NC PDI+TY  L+ G C++ ++  A+++L  M   G
Sbjct: 524 LLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKG 583

Query: 258 CFPTPVTFNVLINGLCKNGELGRAA----------------------------------- 282
             P  V +  L+NGL   G++  A+                                   
Sbjct: 584 VVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTI 643

Query: 283 -KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIING 341
            +++ +M+     PN  +YN L+HG    G   K++ L   MV     P+ VTY  +I G
Sbjct: 644 KRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILG 703

Query: 342 LVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
           L + G      + L  M       +  ++  LI+   ++ K  +A++L+  M      P+
Sbjct: 704 LSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPS 763

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
           +  YSA+I+GL R    D++ E+L EM+  G   N   Y +L+      GK  +A  + +
Sbjct: 764 SKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKE 823

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           +M     V  +V  S +I GLC+ GKL EA +V++ M+  G  P V  +++++H LC   
Sbjct: 824 EMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKES 883

Query: 522 SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
            + +AL L  + L    + + DV +YN+L+  LCK   IS ++DL   M  +G  P+ VT
Sbjct: 884 KIADALHL--KRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPN-VT 940

Query: 582 CNIFLTALKEKLEAPQDGTDFLNELAIR 609
             I LT         Q+G + L ++  R
Sbjct: 941 TYITLTGAMYSTGIMQNGEELLEDIEER 968



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 217/449 (48%), Gaps = 21/449 (4%)

Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
           V + N +LN +   G + +A +    +   +    L N++T+N ++    + G    A+ 
Sbjct: 223 VTTCNILLNSLCTNGEFRKAEDMLQKMKTCR----LSNSVTYNTILHWYVKKGRFKAALC 278

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           +  +M   +   DIYTY  ++D LC+  R   A LLL  M+ D   P   T+N LING  
Sbjct: 279 VLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFF 338

Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
             G++  A  + ++M  +  +P+  TY T+I G C    +DKA+S+L  M  +  MP+E+
Sbjct: 339 GEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPSEI 398

Query: 334 TYGTII----------------NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           +    I                + L+  G   +       M   K   +   ++ +I   
Sbjct: 399 SKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFDSVSFNCIIDSY 458

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
              G   +A  ++  M+  G  PN   Y  L+ GLC+ G   +A++ +F +++   A + 
Sbjct: 459 CHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDE 518

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            T+++L+ G  + G   +A+++ + M KNNC+ +   Y++L+ G C  GK+  A ++   
Sbjct: 519 KTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQM 578

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           ML +G  PD VAY+ +++GL N G V+ A  +F E++C E     D   YN L+N   K 
Sbjct: 579 MLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE-GLYADCIAYNSLMNGYLKG 637

Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
            NI+    +++ M      P+  + NI +
Sbjct: 638 GNINTIKRMMSDMYQSEVYPNSASYNILM 666



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 147/634 (23%), Positives = 273/634 (43%), Gaps = 117/634 (18%)

Query: 75  KLGSYQLGDSTFYSLIQH-YANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHL 133
           K+ + +L +S  Y+ I H Y   G FK+   VL  M R+                     
Sbjct: 248 KMKTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDS-------------------- 287

Query: 134 VEEAIRLFHTMVDEF-HCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
           +   I  ++ M+D+    KR+ ++F     ++++                 +  +++P+ 
Sbjct: 288 IPADIYTYNIMIDKLCRIKRSARAF-----LLLKR---------------MRKDDLIPDE 327

Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
            T+N +I      G +++A  +F  M  +   P + TY T++DG C+  R+D+A+ +L E
Sbjct: 328 CTYNTLINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSE 387

Query: 253 MQVDGCFPT--------------------------------------------------- 261
           MQ+ G  P+                                                   
Sbjct: 388 MQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFRQYMSRMKISFD 447

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            V+FN +I+  C  G +  A  + D M   G  PN  TY  L+ GLC  G+L +A   + 
Sbjct: 448 SVSFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMF 507

Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
            ++      +E T+  ++ G+ K G   +   +   M +     + + Y+ L+SG  ++G
Sbjct: 508 CLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKG 567

Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI-NNGCAANAFTY 440
           K   A+ + + M++KG  P+TV Y+ L++GL   G+   A  +  E+I   G  A+   Y
Sbjct: 568 KILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAY 627

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           +SLM G+ + G  +    +  DM ++    N   Y++L+HG  + G+  ++  ++  M+ 
Sbjct: 628 NSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVR 687

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
           +G +PD V Y  +I GL   G ++ A+K   +M+ LE    PD   ++IL+ A  ++S +
Sbjct: 688 KGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMV-LEGIF-PDRLVFDILITAFSEKSKM 745

Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
            +++ L N M      P   T +  +  L  K        ++L++               
Sbjct: 746 HNALQLFNCMKWLRMSPSSKTYSAMINGLIRK--------NYLDQ-------------SH 784

Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           +++  MLQ  L P  + +  +V   CR  +I  A
Sbjct: 785 EVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRA 818



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/500 (25%), Positives = 243/500 (48%), Gaps = 19/500 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +L++     G     +  ++ +      + EK+F  +     K   ++EA+ L   M
Sbjct: 485 TYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKM 544

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V   +C   + ++  +L+   ++G    AL     +++     ++P+T+ +  ++  +  
Sbjct: 545 VKN-NCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDK---GVVPDTVAYTCLLNGLIN 600

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYC----TLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
            G V  A  +F+E+    C+  +Y  C    +LM+G  K   ++    ++ +M     +P
Sbjct: 601 EGQVKAASYVFQEII---CKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYP 657

Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
              ++N+L++G  K G+  ++  L   M  KG  P+ VTY  LI GL   G +D AV  L
Sbjct: 658 NSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFL 717

Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
           ++MV     P+ + +  +I    +  +  +  ++   M+  +   +   YS +I+GL ++
Sbjct: 718 EKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRK 777

Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
              + + ++ ++M++ G +PN   Y AL++  CRVGK D A  +  EM   G        
Sbjct: 778 NYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAE 837

Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
           SS+++G  + GK  +AV ++  M ++  V     ++ L+H LC++ K+ +A  +   M S
Sbjct: 838 SSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMES 897

Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQ 557
              K DVV+Y+ +I GLC    + +AL L+ EM     KS+   P+V TY  L  A+   
Sbjct: 898 CRLKVDVVSYNVLITGLCKDKRISDALDLYEEM-----KSKGLWPNVTTYITLTGAMYST 952

Query: 558 SNISHSIDLLNSMMDRGCDP 577
             + +  +LL  + +RG  P
Sbjct: 953 GIMQNGEELLEDIEERGLIP 972



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 235/510 (46%), Gaps = 50/510 (9%)

Query: 90  IQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFH 149
           +  ++ +  F SL  ++ R      VV E     + KAY K   V +A      M D+  
Sbjct: 129 VMGFSCTAIFTSLLRIISRFDSTNHVVFE----LLVKAYVKERKVLDAAVAVLFM-DDCG 183

Query: 150 CKRTVKSFNSVLNVIIQEG------LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
            K +  + N++L  ++++G      L+ R    +N  ++    NIL N+L         C
Sbjct: 184 FKASPIACNTILRALVEQGESKYVWLFLRESLAHNFPLDVTTCNILLNSL---------C 234

Query: 204 RLGLVDNAIQLFREMPVRNCE-PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
             G    A  + ++M  + C   +  TY T++    K+ R   A+ +L++M+ D      
Sbjct: 235 TNGEFRKAEDMLQKM--KTCRLSNSVTYNTILHWYVKKGRFKAALCVLEDMERDSIPADI 292

Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
            T+N++I+ LC+     RA  L+  M     +P+E TYNTLI+G   +G ++ A  + + 
Sbjct: 293 YTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLINGFFGEGKINHAHYVFNH 352

Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
           M+    +P+  TY T+I+G  +  R      VL  M+              I+G+    +
Sbjct: 353 MLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQ--------------ITGVM-PSE 397

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
              A ++ K M+E G  P+ V YSALI+     G   EAE     M     + ++ +++ 
Sbjct: 398 ISKAKQILKSMLEDGIDPDIVTYSALINE----GMITEAEHFRQYMSRMKISFDSVSFNC 453

Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
           ++  +   G   +A  ++  M +     N   Y  L+ GLC+ G L +A+     +L   
Sbjct: 454 IIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIP 513

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSN 559
              D   +++++ G+C  G+++EAL L  +M+   CL     PD+ TY ILL+  C++  
Sbjct: 514 SAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCL-----PDIHTYTILLSGFCRKGK 568

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           I  ++ +L  M+D+G  PD V     L  L
Sbjct: 569 ILPALIMLQMMLDKGVVPDTVAYTCLLNGL 598



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 181/417 (43%), Gaps = 66/417 (15%)

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV------------------------- 267
           L+    KE ++ +A + +  M   G   +P+  N                          
Sbjct: 159 LVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESLAHN 218

Query: 268 ----------LINGLCKNGELGRAAKLVDNMFLKGC-LPNEVTYNTLIHGLCLKGNLDKA 316
                     L+N LC NGE  +A  ++  M  K C L N VTYNT++H    KG    A
Sbjct: 219 FPLDVTTCNILLNSLCTNGEFRKAEDMLQKM--KTCRLSNSVTYNTILHWYVKKGRFKAA 276

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           + +L+ M       +  TY  +I+ L ++ R+     +L  M +     +E  Y+TLI+G
Sbjct: 277 LCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLING 336

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD----------------- 419
            F EGK   A  ++  M+ +   P+   Y+ +IDG CR  + D                 
Sbjct: 337 FFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPS 396

Query: 420 ---EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
              +A++IL  M+ +G   +  TYS+L+      G   +A    + M++    ++ V ++
Sbjct: 397 EISKAKQILKSMLEDGIDPDIVTYSALI----NEGMITEAEHFRQYMSRMKISFDSVSFN 452

Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC- 535
            +I   C  G + EA  V+  M+  G  P+V  Y +++ GLC  G + +A +    M C 
Sbjct: 453 CIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQF---MFCL 509

Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           L+  S  D  T+N LL  +CK   +  ++DL   M+   C PD+ T  I L+    K
Sbjct: 510 LDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRK 566



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/360 (20%), Positives = 161/360 (44%), Gaps = 37/360 (10%)

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L R+++     N V +  ++   VK  + +D A  ++ M++  F  +    +T++  L +
Sbjct: 141 LLRIISRFDSTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVE 200

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA-ANAF 438
           +G+++      ++ +      +    + L++ LC  G+  +AE++L +M    C  +N+ 
Sbjct: 201 QGESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM--KTCRLSNSV 258

Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
           TY++++  + + G+   A+ + +DM +++   +   Y+++I  LC   +   A ++  +M
Sbjct: 259 TYNTILHWYVKKGRFKAALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRM 318

Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ- 557
                 PD   Y+++I+G    G +  A  +FN M  L     P V TY  +++  C+  
Sbjct: 319 RKDDLIPDECTYNTLINGFFGEGKINHAHYVFNHM--LRQTFVPSVATYTTMIDGYCRNR 376

Query: 558 -------------------SNISHSIDLLNSMMDRGCDPDLVTCNIFLT----------- 587
                              S IS +  +L SM++ G DPD+VT +  +            
Sbjct: 377 RIDKALSVLSEMQITGVMPSEISKAKQILKSMLEDGIDPDIVTYSALINEGMITEAEHFR 436

Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
               +++   D   F N +      R      F + + M++   SP   T++ +++ LC+
Sbjct: 437 QYMSRMKISFDSVSF-NCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQ 495



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 30/259 (11%)

Query: 401 NTVVYSALIDGLCRVGKP-DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           N VV+  L+    +  K  D A  +LF M + G  A+    +++++   E G+       
Sbjct: 152 NHVVFELLVKAYVKERKVLDAAVAVLF-MDDCGFKASPIACNTILRALVEQGESKYVWLF 210

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK-PDVVAYSSMIHGLC 518
            ++   +N   +    ++L++ LC +G+ R+A  +  +M  + C+  + V Y++++H   
Sbjct: 211 LRESLAHNFPLDVTTCNILLNSLCTNGEFRKAEDMLQKM--KTCRLSNSVTYNTILHWYV 268

Query: 519 NAGSVEEALKLFNEMLCLEPKSQP-DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
             G  + AL +  +M   E  S P D++TYNI+++ LC+    + +  LL  M      P
Sbjct: 269 KKGRFKAALCVLEDM---ERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIP 325

Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTST 637
           D  T N  +                        F   + +    +   ML++   P  +T
Sbjct: 326 DECTYNTLINGF---------------------FGEGKINHAHYVFNHMLRQTFVPSVAT 364

Query: 638 WERVVQELCRPKRIQAAIN 656
           +  ++   CR +RI  A++
Sbjct: 365 YTTMIDGYCRNRRIDKALS 383


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 247/510 (48%), Gaps = 41/510 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           + EA+  F+ M+        +  FN++   + ++  Y   +     +     + +L N +
Sbjct: 88  LHEALHFFNQMI-HMQTTPALSRFNNLFGALAKKKQYLHVISMCGRM---NSIGLLKNFI 143

Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
           + N+++  +C +  V     +F  +  +   P+  T+  L+ GLC E ++ EAV +   M
Sbjct: 144 SLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIM 203

Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM------FLKGCLPNEVTYNTLIHGL 307
            V  C P+ +T  VLI+GLC+ G    A KL + M      F   C P  V+Y+ +I  L
Sbjct: 204 GVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSL 263

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C  G +++A      M      PN VTY ++++GL       +  R+ + M +     + 
Sbjct: 264 CKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDV 323

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
             +S LI  L K GK ++A  L+  M+++  +P+T  Y+ LI+G C  G  DE ++I   
Sbjct: 324 VTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLS 383

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK---------------------- 465
           M+N  C  +A +YS LMK + +  + H A+ ++++M                        
Sbjct: 384 MVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGE 443

Query: 466 ---NNCVYNEVCYS---VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
               + V + + YS   V + GLC++G + EA  V+  + +     +V  ++S+I+G+C 
Sbjct: 444 IQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCR 503

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
           +  +E A +LFN  LC E   QPDV TY I++  LCK      + DL   M ++GC P++
Sbjct: 504 SEKLEIAWELFNR-LCNEAL-QPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNV 561

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           VT N  +  L    E P+   + L+++A R
Sbjct: 562 VTFNTLMRGLCLNSERPKI-VELLHKMAAR 590



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 204/406 (50%), Gaps = 15/406 (3%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN------CEPDIYTYCTLMDGLCKENRL 243
           P+ +T  ++I  +CR G   NA++L   M   N      C+P + +Y  ++D LCK+  +
Sbjct: 210 PSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLV 269

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
           + A     EM+  G FP  VT+  L++GLC   E   A +L   M   G LP+ VT++ L
Sbjct: 270 ERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVL 329

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I  LC  G + +A  L D MV     P+  TY  +I G    G   +G ++ +SM  ++ 
Sbjct: 330 IGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRC 389

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             +   YS L+    K+ +   AM L+++MM++G +P  + YS + D     G+  + ++
Sbjct: 390 QHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEI-QFQD 448

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           ++ + I+         Y+  + G  ++G   +A++++  +       N   ++ LI+G+C
Sbjct: 449 MVLDSISYS------IYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMC 502

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
              KL  A  ++ ++ +   +PDVV Y+ MI+GLC  G  ++A  LF EM   E    P+
Sbjct: 503 RSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEM--EEKGCAPN 560

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           V T+N L+  LC  S     ++LL+ M  R   PD  T  I +  L
Sbjct: 561 VVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDIL 606



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 194/405 (47%), Gaps = 34/405 (8%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH---MNILP 190
           + EA+R+F  M   F C+ +  +   +++ + + G    AL+ +  ++N      +N  P
Sbjct: 193 IGEAVRVFKIM-GVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKP 251

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
             ++++ +I ++C+ GLV+ A + F EM  +   P++ TY +L+ GLC  +  +EA  L 
Sbjct: 252 TVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLF 311

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
            EM   G  P  VTF+VLI  LCK G++  A+ L D M  +   P+  TYN LI G CL 
Sbjct: 312 IEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLA 371

Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFH----- 364
           G +D+   +   MV  +C  +  +Y  ++    K    V GA +L   M +R        
Sbjct: 372 GMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCK-DSEVHGAMILYREMMDRGIQPTVIT 430

Query: 365 -----------------------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPN 401
                                  ++  IY+  + GL K G   +A+ ++  +       N
Sbjct: 431 YSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASN 490

Query: 402 TVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
             ++++LI+G+CR  K + A E+   + N     +  TY+ ++ G  + G+  KA +++ 
Sbjct: 491 VAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFL 550

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPD 506
           +M +  C  N V ++ L+ GLC + +  +   +  +M +R   PD
Sbjct: 551 EMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPD 595



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 132/283 (46%), Gaps = 29/283 (10%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           ++ L   L K+ +    + +  +M   G   N +  + L++ LC V +  E   +   ++
Sbjct: 110 FNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFISLNILLNCLCSVKRVFEGFVVFGMIL 169

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG--- 486
             G   N  T+++L+KG    GK  +AV ++K M   +C  + +   VLI GLC  G   
Sbjct: 170 RKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTC 229

Query: 487 ---KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
              KL EA +         CKP VV+YS +I  LC  G VE A + F EM   E    P+
Sbjct: 230 NALKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMK--EKGIFPN 287

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
           V TY  LL+ LC  S    +  L   M+D G  PD+VT ++ + AL              
Sbjct: 288 VVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGAL-------------- 333

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
                ++ K +  SG F   ++M+Q+++ P T T+  +++  C
Sbjct: 334 ----CKVGKVKEASGLF---DLMVQRYVEPSTRTYNILIEGYC 369



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 36/290 (12%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  LI      G  K    +   M +       +++  + + Y  A +V+E  ++F +M
Sbjct: 325 TFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSM 384

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF--------- 195
           V++  C+    S++ ++    ++   H A+  Y  +++     I P  +T+         
Sbjct: 385 VNK-RCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDR---GIQPTVITYSKVGDARKL 440

Query: 196 -------------------NLVIKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLM 234
                              N+ +  +C+ G V  A+ +F  +   NC+   ++  + +L+
Sbjct: 441 FGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGL--ENCKFASNVAIFNSLI 498

Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
           +G+C+  +L+ A  L + +  +   P  VT+ ++I GLCK G+  +A  L   M  KGC 
Sbjct: 499 NGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCA 558

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           PN VT+NTL+ GLCL     K V LL +M A K  P+  T   +++ L+K
Sbjct: 559 PNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLK 608



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 112/248 (45%), Gaps = 12/248 (4%)

Query: 83  DSTFYS-LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLF 141
           D+  YS L++ Y    +     M+LYR   ++ +   +  +  +   G A  +   I+  
Sbjct: 392 DAGSYSILMKAYCKDSEVHG-AMILYREMMDRGI---QPTVITYSKVGDARKLFGEIQFQ 447

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
             ++D      +   +N  L+ + + G    AL+ +  + N K  +   N   FN +I  
Sbjct: 448 DMVLDSI----SYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFAS---NVAIFNSLING 500

Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
           +CR   ++ A +LF  +     +PD+ TY  ++ GLCK  +  +A  L  EM+  GC P 
Sbjct: 501 MCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPN 560

Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
            VTFN L+ GLC N E  +  +L+  M  +   P+  T   ++  L    N  + ++LL 
Sbjct: 561 VVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTLLIVMDILLKDENYHECLNLLP 620

Query: 322 RMVASKCM 329
                + M
Sbjct: 621 TFPVQEAM 628



 Score = 44.3 bits (103), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 25/140 (17%)

Query: 518 CNAG--SVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           C +G  ++ EAL  FN+M+ ++  + P +  +N L  AL K+    H I +   M   G 
Sbjct: 81  CKSGDFTLHEALHFFNQMIHMQ--TTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGL 138

Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
             + ++ NI L  L                        +R   GF +  ++L+K   P T
Sbjct: 139 LKNFISLNILLNCL---------------------CSVKRVFEGFVVFGMILRKGYRPNT 177

Query: 636 STWERVVQELCRPKRIQAAI 655
            T+  +V+ LC   +I  A+
Sbjct: 178 RTFTNLVKGLCLEGKIGEAV 197


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 217/473 (45%), Gaps = 23/473 (4%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   + PN  T+   I   CR   V+ A  L+  M       D+ T   L+ GLC++ R 
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  L  EM   G  P  VT+  LI+ L K G       L+  M  +G + + VTY  L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +  L  +G  D+    L   ++    PN VTY  +I+ L K     +  +VL+ MEE+  
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   +S++I+G  K G  + A +  + M E+G  PN V Y  LIDG  +    D A E
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  +M+  G   N F   SL+ G  ++GK  +A+ ++KD + +    + V Y+ LI GL 
Sbjct: 471 VYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G +  A     +++ R   PD V Y+  I+ LC  G  +EA     EM  +  K  PD
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLK--PD 588

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
             TYN ++ + C++   + ++ LL+ M      P+L+T N  +  L     A +     L
Sbjct: 589 QSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT-GAVEKAKYLL 647

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           NE+          S GF           SP + T  RV+Q   + +R+   ++
Sbjct: 648 NEM---------VSAGF-----------SPSSLTHRRVLQACSQSRRLDVILD 680



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 150/598 (25%), Positives = 267/598 (44%), Gaps = 30/598 (5%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRV---VLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI   A +G  K L  +L  M     V   V   + +      GK   V++ +R  
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF- 369

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGL--YHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
             + D         S N V   ++ + L   H   E    ++  +  +I PN +TF+ VI
Sbjct: 370 -ALSDNL-------SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
               + GL+D A +  R M  R   P++ TY TL+DG  K    D A+ +  +M  +G  
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
                 + L+NGL +NG++  A  L  +    G   + V Y TLI GL   G++  A   
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              ++    +P+ V Y   IN L  LG+  +    L  M       ++  Y+T+I    +
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCR 601

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           +G+   A+KL  +M     KPN + Y+ L+ GL   G  ++A+ +L EM++ G + ++ T
Sbjct: 602 KGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           +  +++   +S +    ++I + M       +   Y+ L+  LC  G  R+A +V  +ML
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G  PD + ++++I G C +  ++ A   + +M  L     P++ T+N LL  L     
Sbjct: 722 GSGIAPDTITFNALILGHCKSSHLDNAFATYAQM--LHQNISPNIATFNTLLGGLESVGR 779

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTA---LKEKLEAPQ-----DGTDFL------NE 605
           I  +  +L  M   G +P+ +T +I  T       K+EA +      G  F+      N 
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNA 839

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNLY 663
           L     K    +   ++ + M ++ + P + T++ +V       R Q + N  ++ +Y
Sbjct: 840 LISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYFTEIY 897



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 138/549 (25%), Positives = 245/549 (44%), Gaps = 44/549 (8%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  A  KAH V+EA ++   M +E      V +F+SV+N  ++ GL  +A E+   
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEM-EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   K   I PN +T+  +I    +    D A++++ +M     + + +   +L++GL +
Sbjct: 440 M---KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 240 ENRLDEAVLLLDEMQ--------------VDGCF---------------------PTPVT 264
             +++EA+ L  +                +DG F                     P  V 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NV IN LC  G+   A   +  M   G  P++ TYNT+I   C KG   KA+ LL  M 
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKA 383
            S   PN +TY T++ GL   G AV+ A+ L++ M    F  +   +  ++    +  + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTG-AVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +  + + + MM  G   +  VY+ L+  LC  G   +A  +L EM+ +G A +  T+++L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  +S     A   +  M   N   N   ++ L+ GL   G++ EA  V  +M   G 
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +P+ + Y  +  G     +  EA++L+ EM  +     P V TYN L++   K   ++ +
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEM--VGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
            +L   M  RG  P   T +I ++   +     +    +  E+      R ++      V
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYFTEIYCFSASRHQSKIAISRV 913

Query: 624 EVMLQKFLS 632
            + LQ F+S
Sbjct: 914 NLALQ-FMS 921



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 19/384 (4%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I  +   GL   AI+ FR     +    +Y++C L         L  A+ LL   +   
Sbjct: 52  LIPALATSGLAAAAIR-FRPADPASLNALLYSHCRL-------RLLRPAIALLRSSR--- 100

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             PT V +N+L+  L  +     A  ++  M  +G   + VT NTL+ GLC  G +D A 
Sbjct: 101 --PTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           +L DR      + + + + T+I G  ++G       V   M  +   ++   Y+TL++G 
Sbjct: 156 ALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            + G+ + A  +   M E G  PN   Y+  I   CR    +EA ++   M+ NG   + 
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            T S+L+ G    G+  +A  ++++M K     N V Y  LI  L + G+ +E   +  +
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGE 334

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M+SRG   D+V Y++++  L   G  +E          L     P+  TY +L++ALCK 
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR--FALSDNLSPNGVTYTVLIDALCKA 392

Query: 558 SNISHSIDLLNSMMDRGCDPDLVT 581
            N+  +  +L  M ++   P++VT
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVT 416



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 120/300 (40%), Gaps = 22/300 (7%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ L++ L     A   +    +M ++G   + V  + L+ GLCR G+ D A   L +  
Sbjct: 106 YNILLAALSDHAHAPAVLA---EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA-LADRG 161

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
               A +   +++L+ G+   G    A+ +   M       + V Y+ L+ G C  G++ 
Sbjct: 162 GGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVD 221

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            AR V   M   G  P+V  Y+  I   C    VEEA  L+  M  +      DV T + 
Sbjct: 222 AARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGM--VRNGVLLDVVTLSA 279

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+  LC+    S +  L   M   G  P+ VT    + +L  K    ++    L E+  R
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA-KAGRGKELLSLLGEMVSR 338

Query: 610 ---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                          L K+ +T      +   L   LSP   T+  ++  LC+   +  A
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA 398


>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
          Length = 642

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/524 (26%), Positives = 258/524 (49%), Gaps = 7/524 (1%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF-IFK 126
           + F    K  ++Q   ST+ +LI+    +  +  +   +  + R   V +  + +  + K
Sbjct: 111 QFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVK 170

Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
           A G+A +V +A+ +F+       CK T  ++NSV+ +++QEG + +  E Y  + N    
Sbjct: 171 ALGRAKMVSKALSVFYQAKGR-KCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG-- 227

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
           +  P+T+T++ +I +  +LG  D+AI+LF EM     +P    Y TL+    K  ++++A
Sbjct: 228 DCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
           + L +EM+  GC PT  T+  LI GL K G +  A     +M   G  P+ V  N L++ 
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHV 365
           L   G +++  ++   M   +C P  V+Y T+I  L +    V         M+      
Sbjct: 348 LGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407

Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
           +E+ YS LI G  K  + E A+ L ++M EKG  P    Y +LI+ L +  + + A+E+ 
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELF 467

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            E+  N    ++  Y+ ++K F + GK  +AV+++ +M       +   Y+ L+ G+ + 
Sbjct: 468 KELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKA 527

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
           G + EA  +  +M   GC+ D+ +++ +++G    G    A+++F  +       +PD  
Sbjct: 528 GMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETI--KHSGIKPDGV 585

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           TYN LL           +  ++  M D+G + D +T +  L A+
Sbjct: 586 TYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 147/307 (47%), Gaps = 20/307 (6%)

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
           V+  + S L+  L +      A+ ++ Q   + CKP +  Y+++I  L + G+ ++  E+
Sbjct: 160 VSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEV 219

Query: 425 LFEMINNG-CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY-NEVCYSVLIHGL 482
             EM N G C  +  TYS+L+  + + G+   A+ ++ +M K+NC+   E  Y+ L+   
Sbjct: 220 YTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEM-KDNCMQPTEKIYTTLLGIY 278

Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
            + GK+ +A  ++ +M   GC P V  Y+ +I GL  AG V+EA   + +ML       P
Sbjct: 279 FKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML--RDGLTP 336

Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE----------- 591
           DV   N L+N L K   +    ++ + M    C P +V+ N  + AL E           
Sbjct: 337 DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSW 396

Query: 592 --KLEAPQ-DGTDFLNELAIRLF-KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
             K++A     ++F   + I  + K  R      ++E M +K   P  + +  ++  L +
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456

Query: 648 PKRIQAA 654
            KR +AA
Sbjct: 457 AKRYEAA 463


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 230/451 (50%), Gaps = 49/451 (10%)

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
           +HC    +++ +++N + + G    ALE    +V     N+ PN + +N ++  +C+ GL
Sbjct: 176 YHCN--ARTYGALVNGLCKIGDTSGALECLKKMVKR---NLGPNVVVYNAILDGLCKRGL 230

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE-NRLDEAVLLLDEMQVD-GCFPTPVTF 265
           V  A+ L  EM V N EP++ TY  L+ GLC E     E V L +EM  + G  P   TF
Sbjct: 231 VGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQTF 290

Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV- 324
           ++L++G CK G L RA  +V  M   G  PN VTYN+LI G CL+  +++A+ +   MV 
Sbjct: 291 SILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVR 350

Query: 325 -ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
               C+P+ VT+ ++I+G  K+                                 KE   
Sbjct: 351 EGEGCLPSVVTHNSLIHGWCKV---------------------------------KE--V 375

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + AM L  +M+ KG  P+   +++LI G C V KP  A E+ F M  +G   N  T + +
Sbjct: 376 DKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVV 435

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  +     +AV +++ M K+    + V Y++++ G+C+ GKL +AR + + +L +G 
Sbjct: 436 LDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGL 495

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           K D   Y+ MI GLC  G +++A +L  +M   E    P+  +YN+ +  L ++ +I+ S
Sbjct: 496 KIDSYTYNIMIKGLCREGLLDDAEELLRKMK--ENGCPPNKCSYNVFVQGLLRKYDIARS 553

Query: 564 IDLLNSMMDRGCDPDLVTCNI---FLTALKE 591
              L  M D+G   D  T  +   FL+A +E
Sbjct: 554 RKYLQIMKDKGFPVDATTAELLIRFLSANEE 584



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 217/410 (52%), Gaps = 8/410 (1%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P  +T N ++  +C  G V++A+ L  +M       +  TY  L++GLCK      A+  
Sbjct: 143 PTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALEC 202

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L +M      P  V +N +++GLCK G +G A  L+  M +    PN VTYN LI GLC 
Sbjct: 203 LKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCG 262

Query: 310 K-GNLDKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           + G   + V L + MVA K  +P+  T+  +++G  K G  +    V+  M       N 
Sbjct: 263 EFGGWREGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNV 322

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKG--CKPNTVVYSALIDGLCRVGKPDEAEEIL 425
             Y++LI+G     + E+AM+++  M+ +G  C P+ V +++LI G C+V + D+A  +L
Sbjct: 323 VTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLL 382

Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
            EM+  G   + FT++SL+ GF E  K   A E++  M ++  V N    +V++ GL + 
Sbjct: 383 SEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKC 442

Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDV 544
               EA  ++  M+  G   D+V Y+ M+ G+C  G + +A KL +   C+  K  + D 
Sbjct: 443 WLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLS---CVLVKGLKIDS 499

Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE 594
           +TYNI++  LC++  +  + +LL  M + GC P+  + N+F+  L  K +
Sbjct: 500 YTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYD 549



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 161/314 (51%), Gaps = 9/314 (2%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           E + LF+ MV E      V++F+ +++   +EGL  RA      +V    + + PN +T+
Sbjct: 269 EGVGLFNEMVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMV---RIGVEPNVVTY 325

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVR---NCEPDIYTYCTLMDGLCKENRLDEAVLLLDE 252
           N +I   C    ++ A+++F  M VR    C P + T+ +L+ G CK   +D+A+ LL E
Sbjct: 326 NSLIAGYCLRSQMEEAMRVFGLM-VREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSE 384

Query: 253 MQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
           M   G  P   T+  LI G C+  +   A +L   M   G +PN  T   ++ GL LK  
Sbjct: 385 MVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGL-LKCW 443

Query: 313 LD-KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
           LD +AV+L   M+ S    + V Y  +++G+ K+G+  D  ++L  +  +   ++ Y Y+
Sbjct: 444 LDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYN 503

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            +I GL +EG  +DA +L ++M E GC PN   Y+  + GL R      + + L  M + 
Sbjct: 504 IMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDK 563

Query: 432 GCAANAFTYSSLMK 445
           G   +A T   L++
Sbjct: 564 GFPVDATTAELLIR 577



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 135/279 (48%), Gaps = 18/279 (6%)

Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
           M + G +P  V  + +++GLC  G  + A  ++ +M N G   NA TY +L+ G  + G 
Sbjct: 136 MTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGD 195

Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
              A+E  K M K N   N V Y+ ++ GLC+ G + EA  +  +M     +P+VV Y+ 
Sbjct: 196 TSGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNC 255

Query: 513 MIHGLCNA-GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
           +I GLC   G   E + LFNEM+  E    PDV T++IL++  CK+  +  +  ++  M+
Sbjct: 256 LIQGLCGEFGGWREGVGLFNEMVA-EKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMV 314

Query: 572 DRGCDPDLVTCNIFLTA--LKEKLEAP--------QDGTDFL------NELAIRLFKRQR 615
             G +P++VT N  +    L+ ++E          ++G   L      N L     K + 
Sbjct: 315 RIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKE 374

Query: 616 TSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                 ++  M+ K L P   TW  ++   C  K+  AA
Sbjct: 375 VDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAA 413


>gi|413926774|gb|AFW66706.1| hypothetical protein ZEAMMB73_789977 [Zea mays]
          Length = 642

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 229/484 (47%), Gaps = 54/484 (11%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           N  +F ++ +  CR G   +A+++   MP  N    +    T++ G CKE  ++EA  L+
Sbjct: 175 NEFSFGILARGYCRAGRSVDALKVLDGMPSMN----LVVCNTVVAGFCKEGLVEEAERLV 230

Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM---FLKGC-LPNEVTYNTLIHG 306
           + M+V G  P  VTFN  I+ LCK G +  A ++  +M   +  G   P++VT++ ++ G
Sbjct: 231 ERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQEDWQHGLPRPDQVTFDVMLSG 290

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
            C  G +D+A  L+D M     +    +Y   ++GLV+ GR  +   +L  M   + H N
Sbjct: 291 FCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPN 350

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
            Y Y+ ++SGL KEGKA DA ++   +      P+ V Y++L+   C  G    A  IL 
Sbjct: 351 SYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILD 410

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM   GCA N+FTY+ L++  + +G+  +A  + + M++     +    +++I GLC + 
Sbjct: 411 EMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNS 470

Query: 487 KLREARMVWTQM-----------------------LSRGCKPDVVAYSSMIHGLCNAGSV 523
           KL  A  +   M                       +S+ C PD + YS +I  LC  G  
Sbjct: 471 KLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRF 530

Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
           +EA K   EM+  +    PD   Y+  ++  CK    S +I +L  M  +GC+P   T N
Sbjct: 531 DEAKKKLLEMIVKD--ISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYN 588

Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQ 643
           + +   +EK                      ++    K++  M +K +SP   T+  +++
Sbjct: 589 LLIRGFEEK---------------------HKSDEIMKLMSEMEEKGVSPNVLTYNSLIK 627

Query: 644 ELCR 647
             C+
Sbjct: 628 SFCQ 631



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 205/423 (48%), Gaps = 27/423 (6%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV-N 182
           +   + K  LVEEA RL   M  +      V +FNS ++ + + G    A   +  +  +
Sbjct: 213 VVAGFCKEGLVEEAERLVERMRVQGLAPNVV-TFNSRISALCKAGRVLDAYRIFKDMQED 271

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            +H    P+ +TF++++   C  G VD A  L   M        + +Y   + GL +  R
Sbjct: 272 WQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGR 331

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYN 301
           + EA  LL EM  +   P   T+N++++GLCK G+    A+ V+N    G + P+ VTY 
Sbjct: 332 VGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGK-AFDARRVENFIRSGVMSPDVVTYT 390

Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
           +L+H  C KGN+  A  +LD M    C PN  TY  ++  L + GR  +  R+L  M E+
Sbjct: 391 SLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEK 450

Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG-----------------------C 398
            + ++    + +I GL +  K + AM +   M E+G                       C
Sbjct: 451 GYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRC 510

Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
            P+ + YS LI  LC+ G+ DEA++ L EMI    + ++  Y + + G+ + GK   A++
Sbjct: 511 LPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIK 570

Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
           + +DM K  C  +   Y++LI G  E  K  E   + ++M  +G  P+V+ Y+S+I   C
Sbjct: 571 VLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFC 630

Query: 519 NAG 521
             G
Sbjct: 631 QQG 633



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/472 (26%), Positives = 214/472 (45%), Gaps = 47/472 (9%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P T  +N +I T  R   +D    L++++ +   +PD++T   L+  LC   R++ A  +
Sbjct: 108 PPTPVYNRLILTALRESRLDLVEALYKDLLLAGAQPDVFTRNLLLRALCDAGRMELAQRV 167

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP--NEVTYNTLIHGL 307
            + M V   F    +F +L  G C+ G    A K++D M      P  N V  NT++ G 
Sbjct: 168 FEAMPVRNEF----SFGILARGYCRAGRSVDALKVLDGM------PSMNLVVCNTVVAGF 217

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNE 367
           C +G +++A  L++RM      PN VT+ + I+ L K GR +D  R+   M+E       
Sbjct: 218 CKEGLVEEAERLVERMRVQGLAPNVVTFNSRISALCKAGRVLDAYRIFKDMQED------ 271

Query: 368 YIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFE 427
                                 W+  +    +P+ V +  ++ G C  G  DEA  ++  
Sbjct: 272 ----------------------WQHGLP---RPDQVTFDVMLSGFCDAGFVDEARVLVDI 306

Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
           M   G      +Y+  + G   +G+  +A E+ ++MA      N   Y++++ GLC++GK
Sbjct: 307 MRCGGFLRRVESYNRWLSGLVRNGRVGEAHELLREMAHERIHPNSYTYNIIVSGLCKEGK 366

Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
             +AR V   + S    PDVV Y+S++H  C+ G++  A ++ +EM   +    P+ FTY
Sbjct: 367 AFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEM--AQKGCAPNSFTY 424

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNE 605
           N+LL +L +    + +  LL  M ++G   D   CNI +  L    KL+      D + E
Sbjct: 425 NVLLQSLWRAGRTTEAERLLERMSEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWE 484

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINK 657
                  R   S    + +  + +   P   T+  ++  LC+  R   A  K
Sbjct: 485 EGSTALGRLGNSFLSVVSDSSISQRCLPDRITYSILISALCKEGRFDEAKKK 536



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 171/358 (47%), Gaps = 33/358 (9%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK---RTVKSFNSVLNVIIQEGLYHRALEF 176
           +F  +   +  A  V+EA      +VD   C    R V+S+N  L+ +++ G    A E 
Sbjct: 283 TFDVMLSGFCDAGFVDEA----RVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAHEL 338

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
              +    H  I PN+ T+N+++  +C+ G   +A ++   +      PD+ TY +L+  
Sbjct: 339 LREMA---HERIHPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHA 395

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C +  +  A  +LDEM   GC P   T+NVL+  L + G    A +L++ M  KG   +
Sbjct: 396 YCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMSEKGYSLD 455

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRM-----------------------VASKCMPNEV 333
               N +I GLC    LD A+ ++D M                       ++ +C+P+ +
Sbjct: 456 TAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSISQRCLPDRI 515

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+ L K GR  +  + L+ M  +    +  IY T I G  K GK   A+K+ + M
Sbjct: 516 TYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM 575

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
            +KGC P+T  Y+ LI G     K DE  +++ EM   G + N  TY+SL+K F + G
Sbjct: 576 EKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIKSFCQQG 633



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 115/250 (46%), Gaps = 19/250 (7%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  Y + G+  +   +L  M ++       ++  + ++  +A    EA RL   M
Sbjct: 388 TYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERM 447

Query: 145 ------VDEFHCKRTVKSF--NSVLNVI--IQEGLYHRALEFYNHIVNA---------KH 185
                 +D   C   +     NS L+V   I +G++         + N+           
Sbjct: 448 SEKGYSLDTAGCNIIIDGLCRNSKLDVAMGIVDGMWEEGSTALGRLGNSFLSVVSDSSIS 507

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
              LP+ +T++++I  +C+ G  D A +   EM V++  PD   Y T + G CK  +   
Sbjct: 508 QRCLPDRITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSL 567

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ +L +M+  GC P+  T+N+LI G  +  +     KL+  M  KG  PN +TYN+LI 
Sbjct: 568 AIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSDEIMKLMSEMEEKGVSPNVLTYNSLIK 627

Query: 306 GLCLKGNLDK 315
             C +G L +
Sbjct: 628 SFCQQGMLTR 637


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/313 (34%), Positives = 167/313 (53%)

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           R   PD  TY  +++ LCK  R+D+A+  ++EM   G  P    +N +++GLC+  ++  
Sbjct: 3   RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 62

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
           A  L + M  +   PN VTYNTLI+GLC    ++ A  L   M     +P EV+Y T+I+
Sbjct: 63  ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 122

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
           G  K    V    V   M       N   Y+TLI GL K GK + A ++   M++KG  P
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 182

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           N   YS LIDG C+V + DEA ++L +M+  G A    TY+ L+     + K   A +++
Sbjct: 183 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 242

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           + MA+  C    V Y+ L+  LC   +L  A  ++ +M+++GC PD + Y ++  GL  A
Sbjct: 243 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 302

Query: 521 GSVEEALKLFNEM 533
           G V EA +L  +M
Sbjct: 303 GKVHEAQELMEKM 315



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 170/309 (55%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ LT+  +++ +C+   +D+A+    EM  R  +PD + Y  ++ GLC+E +++EA LL
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            ++M      P  VT+N LINGLCK   +  A +L   M  KG +P EV+YNTLI G C 
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
           K +L  A  + D+MV S C+PN VTY T+I+GL K G+    A VL  M ++    N   
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           YS LI G  K  + ++A KL +QM+ +G  P  V Y+ L++ LCR  K ++A ++   M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
              C     TY++L++      +   A  ++ +M    C  + + Y  L  GL   GK+ 
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 490 EARMVWTQM 498
           EA+ +  +M
Sbjct: 307 EAQELMEKM 315



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 147/277 (53%)

Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
            I P+   +N V+  +C+   V+ A  LF +M  +   P++ TY TL++GLCK  R++ A
Sbjct: 39  GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETA 98

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L  EM   G  PT V++N LI+G CK  +L  A  + D M    C+PN VTY TLI G
Sbjct: 99  YELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDG 158

Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
           L   G +  A  +LD MV     PN  TY  +I+G  K+ R  +  ++L  M  +     
Sbjct: 159 LSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPT 218

Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
              Y+ L++ L +  K EDA KL++ M ++ C P  V Y+ L+  LC   + D A  +  
Sbjct: 219 VVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYA 278

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
           EMI  GC  +A TY +L  G   +GK H+A E+ + M
Sbjct: 279 EMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 315



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 157/288 (54%), Gaps = 4/288 (1%)

Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
           P+ +TY  ++  LC    +D A++ ++ M      P+   Y  +++GL +  + V+ AR+
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEK-VEEARL 65

Query: 355 LMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
           L   M +++ + N   Y+TLI+GL K  + E A +L+K+M  KG  P  V Y+ LIDG C
Sbjct: 66  LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
           +      A+++  +M+ + C  N  TY++L+ G  +SGK   A E+   M K     N  
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185

Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
            YS LI G C+  ++ EA  +  QM+++G  P VV Y+ +++ LC A  +E+A KLF  M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245

Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
              + +  P V TYN LL ALC    +  +  L   M+ +GC PD +T
Sbjct: 246 A--QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAIT 291



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 160/325 (49%), Gaps = 23/325 (7%)

Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           P+ +TYG I+  L K  R  D    +  M  R    + +IY+ ++SGL +E K E+A  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           +++M+++   PN V Y+ LI+GLC+  + + A E+  EM   G      +Y++L+ GF +
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
                 A +++  M ++NCV N V Y+ LI GL + GK++ A  V   M+ +G  P+V  
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
           YS +I G C    V+EA KL  +M+       P V TYNILLN+LC+   +  +  L   
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMV--TQGIAPTVVTYNILLNSLCRADKLEDAFKLFRG 244

Query: 570 MMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQK 629
           M  R C P +VT N  L A                     L   ++  G  ++   M+ K
Sbjct: 245 MAQRRCHPTVVTYNTLLRA---------------------LCHHKQLDGAHRLYAEMIAK 283

Query: 630 FLSPQTSTWERVVQELCRPKRIQAA 654
              P   T++ +   L R  ++  A
Sbjct: 284 GCPPDAITYDTLAWGLTRAGKVHEA 308



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 157/311 (50%), Gaps = 2/311 (0%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P  +T+  ++  LCK   +  A   V+ M  +G  P+   YN ++ GLC +  +++A  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
            ++MV  +  PN VTY T+INGL K  R      +   M  + +   E  Y+TLI G  K
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           +     A  ++ +M+   C PN V Y+ LIDGL + GK   A E+L  M+  G   N  T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           YS L+ GF +  +  +A ++ + M         V Y++L++ LC   KL +A  ++  M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
            R C P VV Y++++  LC+   ++ A +L+ EM+       PD  TY+ L   L +   
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIA--KGCPPDAITYDTLAWGLTRAGK 304

Query: 560 ISHSIDLLNSM 570
           +  + +L+  M
Sbjct: 305 VHEAQELMEKM 315



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 4/230 (1%)

Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
           KA  +E A  LF  M  + +    V S+N++++   ++     A + ++ +V +   N +
Sbjct: 91  KAWRIETAYELFKEMAGKGYVPTEV-SYNTLIDGFCKKKDLVAAKDVFDKMVRS---NCV 146

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN +T+  +I  + + G V  A ++   M  +   P++ TY  L+DG CK  R+DEA  L
Sbjct: 147 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 206

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L++M   G  PT VT+N+L+N LC+  +L  A KL   M  + C P  VTYNTL+  LC 
Sbjct: 207 LEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCH 266

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
              LD A  L   M+A  C P+ +TY T+  GL + G+  +   ++  M+
Sbjct: 267 HKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 127/261 (48%), Gaps = 23/261 (8%)

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
           M +   P+ + Y  +++ LC+  + D+A   + EM   G   +AF Y+ ++ G  +  K 
Sbjct: 1   MARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKV 60

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A  +++ M K     N V Y+ LI+GLC+  ++  A  ++ +M  +G  P  V+Y+++
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
           I G C    +  A  +F++M  +     P+V TY  L++ L K   +  + ++L+ M+ +
Sbjct: 121 IDGFCKKKDLVAAKDVFDKM--VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 178

Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
           G  P++ T +  +           DG            K +R     K++E M+ + ++P
Sbjct: 179 GVTPNVATYSCLI-----------DG----------FCKVRRVDEAHKLLEQMVTQGIAP 217

Query: 634 QTSTWERVVQELCRPKRIQAA 654
              T+  ++  LCR  +++ A
Sbjct: 218 TVVTYNILLNSLCRADKLEDA 238



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 121/246 (49%), Gaps = 4/246 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LI     +   ++   +   M  +  V  E S+  +   + K   +  A  +F  M
Sbjct: 81  TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 140

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           V   +C   V ++ ++++ + + G    A E  + +V      + PN  T++ +I   C+
Sbjct: 141 VRS-NCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK---GVTPNVATYSCLIDGFCK 196

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +  VD A +L  +M  +   P + TY  L++ LC+ ++L++A  L   M    C PT VT
Sbjct: 197 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 256

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +N L+  LC + +L  A +L   M  KGC P+ +TY+TL  GL   G + +A  L+++M 
Sbjct: 257 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316

Query: 325 ASKCMP 330
            +K  P
Sbjct: 317 LTKRNP 322


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/347 (33%), Positives = 192/347 (55%), Gaps = 3/347 (0%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+ + F+ ++ ++ R+      + L+++M       + YT   L++  C  NRL  A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
           L ++   G  P+  TF  LI GLC  G++G A +L D M  +G  P+ +TY TLI+GLC 
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
              L +A+SL   M+A    PN  TY ++I+GL  LG   +  R+  +M  RK   ++  
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 370 YSTLISGLFKEGKAE---DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
           ++TL+  L KEG  +    AM L+++M ++G  P+TV Y+ LI GLC VG+  +A  +  
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           EM+  G   +  TY  L     ++ +  +A+ + K +   N   +   YS+++ G+C  G
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           +L  AR +++++ S+G  PDV  Y+ MI+GLC  G + EA KLF EM
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 189/363 (52%), Gaps = 10/363 (2%)

Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
           ++  F+ +L  I +   Y   L  Y  +       I  NT T N++I + C L  +  A 
Sbjct: 9   SIVDFSKLLTSITRMKHYSTVLSLYKQM---DSFGIPHNTYTLNILINSFCHLNRLGFAF 65

Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
            +  ++     +P   T+ TL+ GLC E ++ EA+ L D+M  +G  P  +T+  LINGL
Sbjct: 66  SVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGL 125

Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
           CK+ +L  A  L  +M  KG  PN  TY++LIHGLC+ G+  +A+ L   M+  K MP++
Sbjct: 126 CKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQ 185

Query: 333 VTYGTIINGLVKLG--RAVDGARVLM-SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
           +T+ T+++ L K G  + +D A  L   M ++    +   Y+TLI GL   G+  DA+ L
Sbjct: 186 LTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 245

Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
           + +M+  G  P+ V Y  L D LC+  +  EA  +L  +       +   YS +M G   
Sbjct: 246 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 305

Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
           +G+   A +++  ++      +   Y+++I+GLC+ G L EA  ++ +M     + D+ +
Sbjct: 306 AGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM----DENDIES 361

Query: 510 YSS 512
           YS+
Sbjct: 362 YST 364



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 177/350 (50%), Gaps = 7/350 (2%)

Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
           P I  +  L+  + +       + L  +M   G      T N+LIN  C    LG A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
           + ++   G  P+  T+ TLI GLC++G + +A+ L D+M      P+ +TYGT+INGL K
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
             +  +   +   M  +    N + YS+LI GL   G  ++A++L+  M+ +   P+ + 
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 405 YSALIDGLCRVGKP---DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK 461
           ++ L+D LC+ G     D+A  +  EM   G   +  TY++L+ G    G+   A+ ++ 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 462 DMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAG 521
           +M     + + V Y +L   LC++ +L EA ++   +      PD+  YS ++ G+C AG
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 522 SVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSM 570
            +E A  LF++   L  K   PDV TY I++N LC+Q  ++ +  L   M
Sbjct: 308 ELEAARDLFSK---LSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEM 354



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 168/337 (49%), Gaps = 7/337 (2%)

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
           P+ V F+ L+  + +         L   M   G   N  T N LI+  C    L  A S+
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
           L  ++     P+  T+ T+I GL   G+  +  ++   M    F  +   Y TLI+GL K
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           + +  +A+ L+  M+ KG  PN   YS+LI GLC +G   EA  + + MI+     +  T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 440 YSSLMKGFFESGKGH---KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
           +++L+    + G      KA+ ++++M++   + + V Y+ LIHGLC  G+LR+A  ++ 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALC 555
           +M+  G  PD+V Y  +   LC    + EA+ L      +E  +  PD+  Y+I+++ +C
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLK---VIEGTNLDPDIHIYSIVMDGMC 304

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
           +   +  + DL + +  +G  PD+ T  I +  L ++
Sbjct: 305 RAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQ 341



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 146/297 (49%), Gaps = 38/297 (12%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P+T TF  +I+ +C  G +  A+QLF +M     +PD+ TY TL++GLCK+ +L EA+ L
Sbjct: 78  PSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSL 137

Query: 250 LDEMQVDGC-----------------------------------FPTPVTFNVLINGLCK 274
             +M   G                                     P  +TFN L++ LCK
Sbjct: 138 FSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCK 197

Query: 275 NGE---LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
            G    + +A  L + M  +G +P+ VTYNTLIHGLC  G L  A++L   MV    +P+
Sbjct: 198 EGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPD 257

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
            VTY  + + L K  R  +   +L  +E      + +IYS ++ G+ + G+ E A  L+ 
Sbjct: 258 LVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFS 317

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
           ++  KG  P+   Y+ +I+GLC+ G   EA ++  EM  N   + +    +  KG F
Sbjct: 318 KLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIESYSTFSRNAFKGIF 374



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 148/303 (48%), Gaps = 21/303 (6%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           +S L++ + +       + L+KQM   G   NT   + LI+  C + +   A  +L +++
Sbjct: 13  FSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDIL 72

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
             G   +  T+++L++G    GK  +A++++  M       + + Y  LI+GLC+D +L 
Sbjct: 73  KLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLT 132

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           EA  +++ ML++G  P+   YSS+IHGLC  G  +EA++LF  M  +  K  PD  T+N 
Sbjct: 133 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM--IHRKIMPDQLTFNT 190

Query: 550 LLNALCKQSNI---SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           L++ALCK+  I     ++ L   M  +G  PD VT N  +  L   +   +D     +E+
Sbjct: 191 LVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCH-VGRLRDAIALFHEM 249

Query: 607 AI---------------RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
            +                L K  R +    +++V+    L P    +  V+  +CR   +
Sbjct: 250 VVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 309

Query: 652 QAA 654
           +AA
Sbjct: 310 EAA 312



 Score =  105 bits (262), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 124/256 (48%), Gaps = 20/256 (7%)

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           P+ V +S L+  + R+        +  +M + G   N +T + L+  F    +   A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
             D+ K     +   ++ LI GLC +GK+ EA  ++ +M   G +PDV+ Y ++I+GLC 
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
              + EAL LF++ML       P+ FTY+ L++ LC   +   +I L  +M+ R   PD 
Sbjct: 128 DRQLTEALSLFSDMLA--KGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQ 185

Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWE 639
           +T N  + AL       ++G   + + A+ LF            E M Q+ L P T T+ 
Sbjct: 186 LTFNTLVDAL------CKEGMIQIMDKAMGLF------------EEMSQQGLIPDTVTYN 227

Query: 640 RVVQELCRPKRIQAAI 655
            ++  LC   R++ AI
Sbjct: 228 TLIHGLCHVGRLRDAI 243


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/439 (28%), Positives = 216/439 (49%), Gaps = 9/439 (2%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           F+++ +V+I  G+   A++ ++ +   K   + P T + N ++    +LG  D   + F+
Sbjct: 28  FDALFSVLIDLGMVEEAIQCFSKM---KRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFK 84

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           +M     +P ++TY  ++D +CKE  ++ A  L +EM+  G  P  VT+N +I+G  K G
Sbjct: 85  DMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVG 144

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L       + M    C P+ +TYN LI+  C  G L K +     M  +   PN V+Y 
Sbjct: 145 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYS 204

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
           T+++   K G      +  + M       NEY Y++LI    K G   DA +L  +M++ 
Sbjct: 205 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQV 264

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G + N V Y+ALIDGLC    P E   +L EM+         T+  L+ G  ++    KA
Sbjct: 265 GVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKA 324

Query: 457 VEIWKDMAKN-NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
           ++ +  ++ +     N   Y+ +I GLC+  ++  A  ++ QM  +G  PD  AY+S++ 
Sbjct: 325 IDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMD 384

Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
           G    G+V EAL L ++M  +E   + D+  Y  L+  L   + +  +   L  M+  G 
Sbjct: 385 GNFKQGNVLEALALRDKM--VETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 442

Query: 576 DPDLVTCNIFLTALKEKLE 594
            PD V C   ++ LK+  E
Sbjct: 443 HPDEVLC---ISVLKKHYE 458



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 206/424 (48%), Gaps = 7/424 (1%)

Query: 108 RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE 167
           +M+R +     +S   +   + K    +   R F  M+     K TV ++N +++ + +E
Sbjct: 50  KMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGA-GAKPTVFTYNIMIDCMCKE 108

Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
           G    A   +  +   K   ++P+T+T+N +I    ++G +D+ +  F EM    CEPD+
Sbjct: 109 GDVEAARGLFEEM---KFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDV 165

Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
            TY  L++  CK  +L + +    EM+ +G  P  V+++ L++  CK G + +A K   +
Sbjct: 166 ITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVD 225

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M   G +PNE TY +LI   C  GNL  A  L + M+      N VTY  +I+GL     
Sbjct: 226 MRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWEN 285

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTVVYS 406
             +G  +L  M E    V    +  LI GL K      A+  + ++    G + N  +Y+
Sbjct: 286 PTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYT 345

Query: 407 ALIDGLCRVGKPDEAEEILFE-MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
           A+IDGLC+ G   EA   LFE M   G   +   Y+SLM G F+ G   +A+ +   M +
Sbjct: 346 AMIDGLCK-GNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVE 404

Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                + + Y+ L+ GL    +L++AR    +M+  G  PD V   S++      G + E
Sbjct: 405 TGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINE 464

Query: 526 ALKL 529
           A++L
Sbjct: 465 AVEL 468



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 194/419 (46%), Gaps = 4/419 (0%)

Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
           +P    F+ +   +  LG+V+ AIQ F +M      P   +   L+    K  + D    
Sbjct: 22  VPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 81

Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
              +M   G  PT  T+N++I+ +CK G++  A  L + M  +G +P+ VTYN++I G  
Sbjct: 82  FFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFG 141

Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
             G LD  V   + M    C P+ +TY  +IN   K G+   G      M+      N  
Sbjct: 142 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVV 201

Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
            YSTL+    KEG  + A+K +  M   G  PN   Y++LID  C++G   +A  +  EM
Sbjct: 202 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261

Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
           +  G   N  TY++L+ G        + + +  +M + +     V + VLI GLC++  +
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV 321

Query: 489 REARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
            +A   + ++ +  G + +   Y++MI GLC    VE A  LF +M   +    PD   Y
Sbjct: 322 SKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQM--AQKGLVPDRTAY 379

Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
             L++   KQ N+  ++ L + M++ G   DL+     +  L       Q    FL E+
Sbjct: 380 TSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSH-CNQLQKARSFLEEM 437



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 162/356 (45%), Gaps = 1/356 (0%)

Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
           C P    +  L   L     ++EA+    +M+    FP   + N L++   K G+     
Sbjct: 21  CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 80

Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
           +   +M   G  P   TYN +I  +C +G+++ A  L + M     +P+ VTY ++I+G 
Sbjct: 81  RFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF 140

Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
            K+GR  D       M++     +   Y+ LI+   K GK    ++ +++M   G KPN 
Sbjct: 141 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNV 200

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V YS L+D  C+ G   +A +   +M   G   N +TY+SL+  + + G    A  +  +
Sbjct: 201 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANE 260

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M +    +N V Y+ LI GLC      E   +  +M+    K  VV +  +I GLC    
Sbjct: 261 MLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKL 320

Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
           V +A+  F   +  +   Q +   Y  +++ LCK + +  +  L   M  +G  PD
Sbjct: 321 VSKAIDYFGR-ISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPD 375



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/384 (26%), Positives = 181/384 (47%), Gaps = 7/384 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+  +I      GD ++   +   M+    +    ++  +   +GK   +++ +  F  M
Sbjct: 97  TYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 156

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
            D   C+  V ++N+++N   + G   + LEF+  +   K   + PN ++++ ++   C+
Sbjct: 157 KD-MCCEPDVITYNALINCFCKFGKLPKGLEFFREM---KRNGLKPNVVSYSTLVDAFCK 212

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G++  AI+ + +M      P+ YTY +L+D  CK   L +A  L +EM   G     VT
Sbjct: 213 EGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVT 272

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +  LI+GLC          L+D M         VT+  LI GLC    + KA+    R+ 
Sbjct: 273 YTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRIS 332

Query: 325 AS-KCMPNEVTYGTIINGLVKLGRAVDGARVLM-SMEERKFHVNEYIYSTLISGLFKEGK 382
                  N   Y  +I+GL K G  V+ A  L   M ++    +   Y++L+ G FK+G 
Sbjct: 333 NDFGLQANAAIYTAMIDGLCK-GNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGN 391

Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
             +A+ L  +M+E G K + + Y++L+ GL    +  +A   L EMI  G   +     S
Sbjct: 392 VLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCIS 451

Query: 443 LMKGFFESGKGHKAVEIWKDMAKN 466
           ++K  +E G  ++AVE+   + K+
Sbjct: 452 VLKKHYELGCINEAVELQSYLMKH 475


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/508 (27%), Positives = 235/508 (46%), Gaps = 73/508 (14%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           +L+F  ++V+  +    P+  +FN V+  VC+LG V  A+ +   MP   CEPD+ +Y +
Sbjct: 40  SLKFLAYLVSRGYA---PHRSSFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNS 96

Query: 233 LMDGLCKENRLDEAVLLLDEMQVD---GCFPTPVTFNVLINGL----------------- 272
           L+DG C+   +  A L+L+ ++      C P  V+FN L NG                  
Sbjct: 97  LIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVML 156

Query: 273 -----------------CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
                            CK+GEL  A K  + M      PN VT+  LI G C  G+L+ 
Sbjct: 157 KCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEV 216

Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
            VSL + M   +   N VTY  +I+G  K G       + + M E +   N  +Y+T+I+
Sbjct: 217 VVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIIN 276

Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
           G F+ G +++AMK   +M+ +G + +   Y  +I GLC +GK  EA EI+ +M       
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVP 336

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDM-------------------AKNNCVY------ 470
           +   ++++M  +F+SG+   AV ++  +                   AKN  ++      
Sbjct: 337 DMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYF 396

Query: 471 -----NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
                N+V Y+VLI  LC++    E   +++++   G  PD   Y+S I GLC  G++ +
Sbjct: 397 CTEKANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVD 456

Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
           A KL  +M  ++   + D+F Y  L+  L  +  +  +  + + M+  G  PD    ++ 
Sbjct: 457 AFKLKTKM--VQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLL 514

Query: 586 LTALKEKLEAPQDGTDFLNELAIRLFKR 613
           + A  EK       +D L ++  R   R
Sbjct: 515 IRAY-EKEGNMTTASDLLLDMQTRGLAR 541



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 134/533 (25%), Positives = 236/533 (44%), Gaps = 32/533 (6%)

Query: 8   HTKILLTITNSAMKMKTLSLTTIPSERSHR--FFSVRSAVSSNKQMETEPQGNAKSEQPF 65
           H   L+     A+ +K L+         HR  F SV S V    Q++            F
Sbjct: 27  HIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVVSFVCKLGQVK------------F 74

Query: 66  SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK---SFI 122
           + +I +S P+ G  +    ++ SLI  +  +GD +S  +VL  +R       +    SF 
Sbjct: 75  AVDIVHSMPRFGC-EPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGFTCKPDIVSFN 133

Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
            +F  + K  +++E       M+    C   V ++++ +++  + G    AL+ +N +  
Sbjct: 134 TLFNGFSKMKMLDEVFVYMGVMLK--CCSPNVVTYSTWIDMFCKSGELKLALKSFNCM-- 189

Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
            K   + PN +TF  +I   C+ G ++  + L+ EM       ++ TY  L+DG CK+  
Sbjct: 190 -KRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGE 248

Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
           +  A  +   M  D   P  + +  +ING  + G+   A K +  M  +G   +   Y  
Sbjct: 249 MQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGV 308

Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
           +I GLC  G L +A  +++ M     +P+ + + T++N   K GR      +   + ER 
Sbjct: 309 IISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERG 368

Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC--KPNTVVYSALIDGLCRVGKPDE 420
           F  +    ST+I G+ K G+  +A+  +       C  K N V+Y+ LID LC+     E
Sbjct: 369 FEPDVVALSTMIDGIAKNGQLHEAISYF-------CTEKANDVMYTVLIDALCKEEDFIE 421

Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
            E +  ++   G   + F Y+S + G  + G    A ++   M +     +   Y+ LI+
Sbjct: 422 VERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIY 481

Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
           GL   G + EAR V+ +ML  G  PD   +  +I      G++  A  L  +M
Sbjct: 482 GLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDM 534



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 132/527 (25%), Positives = 245/527 (46%), Gaps = 63/527 (11%)

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
           +   AL+F + +  + +   LP+ +T N  I  +        +++    +  R   P   
Sbjct: 1   MVKEALQFLSRLRKSSN---LPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRS 57

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA------ 282
           ++ +++  +CK  ++  AV ++  M   GC P  +++N LI+G C+NG++  A       
Sbjct: 58  SFNSVVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESL 117

Query: 283 -------------------------KLVDNMF------LKGCLPNEVTYNTLIHGLCLKG 311
                                    K++D +F      LK C PN VTY+T I   C  G
Sbjct: 118 RASYGFTCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSG 177

Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
            L  A+   + M      PN VT+  +I+G  K G       +   M   +  +N   Y+
Sbjct: 178 ELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYT 237

Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
            LI G  K+G+ + A  ++ +M+E   +PN++VY+ +I+G  + G  D A + L +M+N 
Sbjct: 238 ALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQ 297

Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
           G   +   Y  ++ G    GK  +A EI +DM K + V + + ++ +++   + G+++ A
Sbjct: 298 GMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAA 357

Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
             ++ +++ RG +PDVVA S+MI G+   G + EA+  F    C E  +  DV  Y +L+
Sbjct: 358 VNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYF----CTEKAN--DVM-YTVLI 410

Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPD----------LVTCNIFLTALKEKLEAPQDGTD 601
           +ALCK+ +      L + + + G  PD          L      + A K K +  Q+G +
Sbjct: 411 DALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLE 470

Query: 602 FLNELAIRLFKRQRTSGGF-----KIVEVMLQKFLSPQTSTWERVVQ 643
            L+  A        TS G      ++ + ML+  + P ++ ++ +++
Sbjct: 471 -LDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIR 516



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/350 (23%), Positives = 166/350 (47%), Gaps = 9/350 (2%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           TF  LI  Y  +GD + +  +   MRR +  +   ++  +   + K   ++ A  ++  M
Sbjct: 200 TFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRM 259

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
           +++   +     + +++N   Q G    A++F   ++N + M +  +   + ++I  +C 
Sbjct: 260 LED-RVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLN-QGMRL--DITAYGVIISGLCG 315

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
           +G +  A ++  +M   +  PD+  + T+M+   K  R+  AV +  ++   G  P  V 
Sbjct: 316 IGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVA 375

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
            + +I+G+ KNG+L  A       +      N+V Y  LI  LC + +  +   L  ++ 
Sbjct: 376 LSTMIDGIAKNGQLHEAIS-----YFCTEKANDVMYTVLIDALCKEEDFIEVERLFSKIS 430

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            +  +P++  Y + I GL K G  VD  ++   M +    ++ + Y+TLI GL  +G   
Sbjct: 431 EAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMV 490

Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
           +A +++ +M+  G  P++ V+  LI    + G    A ++L +M   G A
Sbjct: 491 EARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGLA 540



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/393 (20%), Positives = 168/393 (42%), Gaps = 53/393 (13%)

Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
           +A+  L R+  S  +P+ VT    I+ L+         + L  +  R +  +   +++++
Sbjct: 4   EALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNSVV 63

Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL--------- 425
           S + K G+ + A+ +   M   GC+P+ + Y++LIDG CR G    A  +L         
Sbjct: 64  SFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASYGF 123

Query: 426 --------FEMINNG--------------------CAANAFTYSSLMKGFFESGKGHKAV 457
                   F  + NG                    C+ N  TYS+ +  F +SG+   A+
Sbjct: 124 TCKPDIVSFNTLFNGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLAL 183

Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
           + +  M ++    N V ++ LI G C+ G L     ++ +M       +VV Y+++I G 
Sbjct: 184 KSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGF 243

Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
           C  G ++ A  ++  M  LE + +P+   Y  ++N   ++ +  +++  L  M+++G   
Sbjct: 244 CKKGEMQRAGGMYLRM--LEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRL 301

Query: 578 DLVTCNIFLTA------LKEKLEAPQD--GTDFLNELAI------RLFKRQRTSGGFKIV 623
           D+    + ++       LKE  E  +D    D + ++ I        FK  R      + 
Sbjct: 302 DITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMY 361

Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
             ++++   P       ++  + +  ++  AI+
Sbjct: 362 HKLIERGFEPDVVALSTMIDGIAKNGQLHEAIS 394


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 134/498 (26%), Positives = 229/498 (45%), Gaps = 41/498 (8%)

Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
           + +A+ K+ +  EA+ +   M  E        + + +  ++I+ G      + +  +V  
Sbjct: 224 LMRAFVKSEMHFEALEILSKM-REVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRK 282

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
                 PN  TFNL+I   CR G       L   M    CEPD+Y+Y  +++  C + + 
Sbjct: 283 GP---CPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQS 339

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
             A+ LL+ M  +GC P+  TF  +I+  CK G +  A K  D +   G   N + YN +
Sbjct: 340 SYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIM 399

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           I G     ++ +A  L + M     +P+ +T+ T++ G  + G+  DG R+L  +     
Sbjct: 400 ISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGL 459

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY------------------ 405
             +  +    ++GL   G+ ++AMKL + ++ KG  P+ V +                  
Sbjct: 460 LHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFY 519

Query: 406 -----------------SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
                            S+L+  L R G  DEA   L++MI+ G       ++ L+ G+F
Sbjct: 520 AYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYF 579

Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
             G  + A  +W +M       + V ++  I+GLC  G + +A  V++ ML +G  P+  
Sbjct: 580 RIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNF 639

Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
            Y+S+I G C  G + EALKL  EM   +    PD+FT N+++  LCKQ  +  +I+   
Sbjct: 640 VYNSLIGGFCKVGKLNEALKLVREM--NKRGLLPDIFTVNMIICGLCKQGRMKLAIETFM 697

Query: 569 SMMDRGCDPDLVTCNIFL 586
            M   G  PD+VT N  +
Sbjct: 698 DMCRMGLSPDIVTYNTLI 715



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 232/453 (51%), Gaps = 6/453 (1%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A+ L + M+ E  CK ++ +F ++++   +EG    A ++++ I   + M +  NT+ +N
Sbjct: 342 ALHLLNLMI-ENGCKPSIATFCTIIDAFCKEGNVELARKYFDEI---EDMGLSQNTIVYN 397

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           ++I    +   +  A  LF EM  ++  PD  T+ TL+ G  +  + ++   LL ++ V 
Sbjct: 398 IMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVS 457

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
           G        +V + GLC  G    A KL++N+  KG  P+ V +N++I      G  ++A
Sbjct: 458 GLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERA 517

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
                 MV     P+  T  +++  LV+ G   +    L  M ++ F V    ++ L+ G
Sbjct: 518 FYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDG 577

Query: 377 LFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAAN 436
            F+ G    A  LW +M  +G  P+ V ++A I+GLC  G   +A ++  +M+  G   N
Sbjct: 578 YFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPN 637

Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
            F Y+SL+ GF + GK ++A+++ ++M K   + +    +++I GLC+ G+++ A   + 
Sbjct: 638 NFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFM 697

Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
            M   G  PD+V Y+++I G C A  V  A  L  +M   +   +PD+ TYNI ++  C 
Sbjct: 698 DMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKM--SDSGWEPDLTTYNIRIHGYCT 755

Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
              I+ ++ +L  ++  G  P+ VT N  + A+
Sbjct: 756 VRKINRAVMILEELISVGIVPNTVTYNTMINAV 788



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 116/480 (24%), Positives = 221/480 (46%), Gaps = 26/480 (5%)

Query: 56  QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYS-LIQHYANSGDFKSLEMVLYRMRREKR 114
           +GN +  + + DEI      +G  Q  ++  Y+ +I  Y  + D     ++   MR +  
Sbjct: 371 EGNVELARKYFDEI----EDMGLSQ--NTIVYNIMISGYVKARDISQANLLFEEMRTKDI 424

Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV------DEFHCKRTVKSFNSVLNVIIQEG 168
           V    +F  +   + +    E+  RL   +       D   C  TV         +   G
Sbjct: 425 VPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAG-------LCWAG 477

Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
            Y  A++   +++      I P+ + FN +I      GL + A   +  M      P   
Sbjct: 478 RYDEAMKLLENLLGK---GIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSS 534

Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP-TPVTFNVLINGLCKNGELGRAAKLVDN 287
           T  +L+  L ++  LDEA + L +M +D  FP T + F VL++G  + G +  A  L + 
Sbjct: 535 TCSSLLISLVRKGSLDEAWIALYDM-IDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNE 593

Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
           M  +G  P+ V +   I+GLC+ G +  A  +   M+    +PN   Y ++I G  K+G+
Sbjct: 594 MKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGK 653

Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
             +  +++  M +R    + +  + +I GL K+G+ + A++ +  M   G  P+ V Y+ 
Sbjct: 654 LNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNT 713

Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
           LIDG C+      A++++ +M ++G   +  TY+  + G+    K ++AV I +++    
Sbjct: 714 LIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVG 773

Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
            V N V Y+ +I+ +C +  L  A ++  ++L     P+ V  + ++   C  G  E+A+
Sbjct: 774 IVPNTVTYNTMINAVC-NVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI 832



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 117/505 (23%), Positives = 227/505 (44%), Gaps = 38/505 (7%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
            ++++   ++  ++  ALE  + +   + + + PN    +++ + + R G      +LF 
Sbjct: 221 LDTLMRAFVKSEMHFEALEILSKM---REVGVTPNPSAISILFRLLIRAGDCGAVWKLFG 277

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKEN--RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCK 274
           ++  +   P+ +T+  L+   C++   R+ EA  LL  M    C P   ++N++IN  C 
Sbjct: 278 DVVRKGPCPNNFTFNLLILEFCRKGWTRIGEA--LLHVMGKFRCEPDVYSYNIVINANCL 335

Query: 275 NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVT 334
            G+   A  L++ M   GC P+  T+ T+I   C +GN++ A    D +       N + 
Sbjct: 336 KGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIV 395

Query: 335 YGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           Y  +I+G VK  R +  A +L   M  +    +   ++TL++G ++ GK ED  +L + +
Sbjct: 396 YNIMISGYVK-ARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDL 454

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
              G   ++ +    + GLC  G+ DEA ++L  ++  G   +   ++S++  +  +G  
Sbjct: 455 SVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLE 514

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
            +A   +  M K     +    S L+  L   G L EA +    M+ +G     +A++ +
Sbjct: 515 ERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVL 574

Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + G    G+V  A  L+NEM     K +   PD   +   +N LC    ++ + D+ + M
Sbjct: 575 LDGYFRIGAVNMAESLWNEM-----KGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDM 629

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
           + +G  P     N F+                 N L     K  + +   K+V  M ++ 
Sbjct: 630 LRKGFVP-----NNFV----------------YNSLIGGFCKVGKLNEALKLVREMNKRG 668

Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
           L P   T   ++  LC+  R++ AI
Sbjct: 669 LLPDIFTVNMIICGLCKQGRMKLAI 693



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 164/356 (46%), Gaps = 6/356 (1%)

Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
           R  E D     TLM    K     EA+ +L +M+  G  P P   ++L   L + G+ G 
Sbjct: 212 RVYESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGA 271

Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
             KL  ++  KG  PN  T+N LI   C KG      +LL  M   +C P+  +Y  +IN
Sbjct: 272 VWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVIN 331

Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
                G++     +L  M E     +   + T+I    KEG  E A K + ++ + G   
Sbjct: 332 ANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQ 391

Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
           NT+VY+ +I G  +     +A  +  EM       +  T+++L+ G +  GK      + 
Sbjct: 392 NTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLL 451

Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
           +D++ +  +++     V + GLC  G+  EA  +   +L +G  P VVA++S+I    NA
Sbjct: 452 RDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNA 511

Query: 521 GSVEEALKLFNEML--CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
           G  E A   +  M+   L P S     T + LL +L ++ ++  +   L  M+D+G
Sbjct: 512 GLEERAFYAYGIMVKFGLTPSSS----TCSSLLISLVRKGSLDEAWIALYDMIDKG 563


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 230/454 (50%), Gaps = 7/454 (1%)

Query: 137 AIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFN 196
           A +L    V E   K   ++F  +   + +   +   +  +  + +     ++    T+ 
Sbjct: 2   AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLAS---RGVVYGETTYK 58

Query: 197 LVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
           LV+  +C  G+ + A++L RE+      P ++ Y  ++ GLC+ +R+ +A  +L++M  +
Sbjct: 59  LVVDGLCGAGMANQALELVRELSGVYT-PTVFIYNGIITGLCRASRVMDAYKVLEKMVEE 117

Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
              P   T+ +L+NGLC++ +   A ++   M   GC PN +TY TLI  L   G +D+A
Sbjct: 118 SIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEA 177

Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
           + ++    + +   + +T  TI+ GL K  R  D  + +  M +     NE  YS L+ G
Sbjct: 178 LRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHG 237

Query: 377 LFKEGKAEDAMKLWKQ-MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
             + G+ +  ++ +++    KG       Y   +D LC+ G  D A + + E+  +G   
Sbjct: 238 FRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVP 297

Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
           +  TYS L+  F  +G+   ++E+ +DM +N    + V YS LI+ LC++ K ++A  + 
Sbjct: 298 DVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLL 357

Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
             M + G  P+VV Y+S++ GLC +G ++E  +++  M  L+ +  PDV TY+I++N L 
Sbjct: 358 ELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMM--LKSRCSPDVVTYSIIMNGLS 415

Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
           K   +  ++ L   +      PD    ++ +T+L
Sbjct: 416 KAGMLDSAVKLFELIKSSREGPDAAAYSMVITSL 449



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 222/441 (50%), Gaps = 18/441 (4%)

Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
           E +RLF T++          ++  V++ +   G+ ++ALE    +         P    +
Sbjct: 37  EVVRLF-TLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGV----YTPTVFIY 91

Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
           N +I  +CR   V +A ++  +M   +  P+++TY  L++GLC+ N+   A  +  EM+ 
Sbjct: 92  NGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKR 151

Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAK-LVDNMFLKGCLPNEV-TYNTLIHGLCLKGNL 313
           +GC P P+T+  LI  L + GE+  A + +++   L+  LP +V T  T++ GLC    L
Sbjct: 152 NGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLE--LPTDVITCTTIVGGLCKASRL 209

Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH----VNEYI 369
           D A+  ++ M      PNEVTY  +++G  + G  +D  RV+   EE K      +    
Sbjct: 210 DDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGE-LD--RVIRFFEEEKARKGGSLEAAA 266

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y   +  L K G  + A K  +++ + G  P+ V YS LI+   R G+ D + E+L +M 
Sbjct: 267 YPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMR 326

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            NG   +  TYS+L+    +  K   A  + + M       N V Y+ ++ GLC+ GK+ 
Sbjct: 327 RNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMD 386

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
           E   V+  ML   C PDVV YS +++GL  AG ++ A+KLF   L    +  PD   Y++
Sbjct: 387 EVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFE--LIKSSREGPDAAAYSM 444

Query: 550 LLNALCKQSNISHSIDLLNSM 570
           ++ +LC+   +  +  + + M
Sbjct: 445 VITSLCRAGKLEEACGMYHGM 465



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 218/468 (46%), Gaps = 31/468 (6%)

Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
           ++  F L+   + R       ++LF  +  R       TY  ++DGLC     ++A+ L+
Sbjct: 18  DSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV 77

Query: 251 DEMQVDGCF-PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
            E+   G + PT   +N +I GLC+   +  A K+++ M  +  +PN  TY  L++GLC 
Sbjct: 78  RELS--GVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCR 135

Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
                 A  +   M  + C PN +TYGT+I  L + G   +  RV++     +   +   
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVIT 195

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF--- 426
            +T++ GL K  + +DA+K  ++M + G +PN V YS L+ G  + G+ D    I F   
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRV--IRFFEE 253

Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
           E    G +  A  Y   +    ++G   +A +  +++ ++  V + V YS+LI+     G
Sbjct: 254 EKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAG 313

Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
           +   +  +   M   G KPDVV YS++I+ LC     ++A +L   M      S P+V T
Sbjct: 314 QFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEA--AGSPPNVVT 371

Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
           YN +++ LCK   +     +   M+   C PD+VT +I +  L +           + + 
Sbjct: 372 YNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKA---------GMLDS 422

Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
           A++LF            E++      P  + +  V+  LCR  +++ A
Sbjct: 423 AVKLF------------ELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 223/453 (49%), Gaps = 13/453 (2%)

Query: 82  GDSTFYSLIQHYANSG-DFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAI 138
           G++T+  ++     +G   ++LE+V    R    V     FI+  I     +A  V +A 
Sbjct: 53  GETTYKLVVDGLCGAGMANQALELV----RELSGVYTPTVFIYNGIITGLCRASRVMDAY 108

Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
           ++   MV+E      V ++  +LN + +      A E +  +   K     PN +T+  +
Sbjct: 109 KVLEKMVEESIVP-NVFTYTILLNGLCRSNKTKLAREVFQEM---KRNGCKPNPITYGTL 164

Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
           I+ + R G +D A+++  E        D+ T  T++ GLCK +RLD+A+  ++EM+  G 
Sbjct: 165 IQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGV 224

Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDN-MFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
            P  VT++ L++G  ++GEL R  +  +     KG       Y   +  LC  G LD+A 
Sbjct: 225 RPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRAR 284

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
             ++ +  S  +P+ VTY  +IN   + G+      +L  M       +   YSTLI+ L
Sbjct: 285 KSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVL 344

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            KE K +DA +L + M   G  PN V Y++++DGLC+ GK DE   +   M+ + C+ + 
Sbjct: 345 CKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDV 404

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            TYS +M G  ++G    AV++++ +  +    +   YS++I  LC  GKL EA  ++  
Sbjct: 405 VTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHG 464

Query: 498 MLSRGCKPDVV-AYSSMIHGLCNAGSVEEALKL 529
           M       ++  A + ++  LC+A   + A ++
Sbjct: 465 MEVTVAGDNICRALAGLVAALCDAKRTDSARRI 497



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 192/408 (47%), Gaps = 18/408 (4%)

Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
            F +L   L +  +     +L   +  +G +  E TY  ++ GLC  G  ++A+ L+ R 
Sbjct: 21  AFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELV-RE 79

Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
           ++    P    Y  II GL +  R +D  +VL  M E     N + Y+ L++GL +  K 
Sbjct: 80  LSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKT 139

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           + A +++++M   GCKPN + Y  LI  L R G+ DEA  ++ E  +     +  T +++
Sbjct: 140 KLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTI 199

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL-REARMVWTQMLSRG 502
           + G  ++ +   A++  ++M +     NEV YS L+HG  + G+L R  R    +   +G
Sbjct: 200 VGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKG 259

Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
              +  AY   +  LC AG ++ A K   E+   +    PDV TY++L+N   +      
Sbjct: 260 GSLEAAAYPGYLDALCKAGYLDRARKSVEELR--QSGVVPDVVTYSMLINTFARAGQFDA 317

Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL-KEK-----------LEAPQDGTDFL--NELAI 608
           S++LL  M   G  PD+VT +  +  L KE+           +EA     + +  N +  
Sbjct: 318 SLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMD 377

Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
            L K  +     ++ E+ML+   SP   T+  ++  L +   + +A+ 
Sbjct: 378 GLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVK 425



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 175/406 (43%), Gaps = 57/406 (14%)

Query: 281 AAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
           AAKL++   ++ G   +   +  L   L  +    + V L   + +   +  E TY  ++
Sbjct: 2   AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
           +GL   G A     ++  +    +    +IY+ +I+GL +  +  DA K+ ++M+E+   
Sbjct: 62  DGLCGAGMANQALELVRELSG-VYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
           PN   Y+ L++GLCR  K   A E+  EM  NGC  N  TY +L++    +G+  +A+ +
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180

Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
             +        + +  + ++ GLC+  +L +A     +M   G +P+ V YS+++HG   
Sbjct: 181 MIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQ 240

Query: 520 AGSVEEALKLFNE-------------------MLC-----------LEPKSQ----PDVF 545
            G ++  ++ F E                    LC           +E   Q    PDV 
Sbjct: 241 HGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVV 300

Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE 605
           TY++L+N   +      S++LL  M   G  PD+VT +  +                   
Sbjct: 301 TYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINV----------------- 343

Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRI 651
               L K ++    F+++E+M      P   T+  V+  LC+  ++
Sbjct: 344 ----LCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKM 385



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 163/342 (47%), Gaps = 4/342 (1%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ +LIQH + +G+      V+   R  +      +   I     KA  +++A++    M
Sbjct: 160 TYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEM 219

Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
             +   +    +++++++   Q G   R + F+      K  ++      +   +  +C+
Sbjct: 220 -RQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSL--EAAAYPGYLDALCK 276

Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G +D A +   E+      PD+ TY  L++   +  + D ++ LL++M+ +G  P  VT
Sbjct: 277 AGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVT 336

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           ++ LIN LCK  +   A +L++ M   G  PN VTYN+++ GLC  G +D+   + + M+
Sbjct: 337 YSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMML 396

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
            S+C P+ VTY  I+NGL K G      ++   ++  +   +   YS +I+ L + GK E
Sbjct: 397 KSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLE 456

Query: 385 DAMKLWKQMMEKGCKPNTV-VYSALIDGLCRVGKPDEAEEIL 425
           +A  ++  M       N     + L+  LC   + D A  I+
Sbjct: 457 EACGMYHGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIV 498


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 209/396 (52%), Gaps = 23/396 (5%)

Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK---ENRLD 244
           I PN  TFN+VI  +C+ G ++ A  +  +M V    P++ +Y TL+DG CK     ++ 
Sbjct: 219 IQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMY 278

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +A  +L EM  +   P   TFN+LI+G  K+  L  + K+   M  +  +PN +TYN+LI
Sbjct: 279 KADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLI 338

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
           +GLC  G +++A+ + D+MV++   PN +TY ++ING  K G   +   +  S++ +   
Sbjct: 339 NGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTR 398

Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
               +Y+ LI    K GK +D   L ++M  +G  P+   Y+ LI GLCR G   EA + 
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNI-EAAKK 457

Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
           LF+ + N    +  T+  LM+G+   G+  KA  + K+M+K       + Y++++ G C+
Sbjct: 458 LFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCK 517

Query: 485 DGKLREARMVWTQM-LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           +G L+ A  + TQM   R  + +V +Y+ ++ G    G +E+A  L NEM  LE    P+
Sbjct: 518 EGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM--LEKGLVPN 575

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
             TY I                +   M+D+G  PD+
Sbjct: 576 RITYEI----------------VKEEMVDKGFVPDI 595



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 205/387 (52%), Gaps = 5/387 (1%)

Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
           L++EM  R  +P+++T+  +++ LCK  ++++A  ++++M+V G  P  V++N LI+G C
Sbjct: 210 LYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYC 269

Query: 274 K---NGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
           K   NG++ +A  ++  M      PN  T+N LI G     NL  ++ +   M+    +P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329

Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
           N +TY ++INGL   G+  +   +   M       N   Y +LI+G  K G  ++A+ ++
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389

Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
             +  +G +P T +Y+ LID  C++GK D+   +  EM   G   +  TY+ L+ G   +
Sbjct: 390 DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
           G    A +++ D   N  + + V + +L+ G C  G+ R+A M+  +M   G KP  + Y
Sbjct: 450 GNIEAAKKLF-DQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           + M+ G C  G+++ A  +  +M   E + + +V +YN+LL    ++  +  +  LLN M
Sbjct: 509 NIMMKGYCKEGNLKAATNMRTQME-KERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEM 567

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQ 597
           +++G  P+ +T  I    + +K   P 
Sbjct: 568 LEKGLVPNRITYEIVKEEMVDKGFVPD 594



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 140/523 (26%), Positives = 248/523 (47%), Gaps = 48/523 (9%)

Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
           +E   +L H++ +    KR  K   S L+  ++ G  H+    ++ I      N+  N++
Sbjct: 101 LELTFKLLHSLAN---AKRYSK-IRSFLDGFVRNGSDHQVHSIFHAISMCD--NVCVNSI 154

Query: 194 TFNLVIKTVCRLGLVDNAIQLFR-------EMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
             ++++         +   + F+       ++   +C+P       LM  L K+NR  + 
Sbjct: 155 IADMLVLAYANNSRFELGFEAFKRSGYYGYKLSAMSCKP-------LMVALLKQNRSADV 207

Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
             L  EM      P   TFNV+IN LCK G++ +A  ++++M + G  PN V+YNTLI G
Sbjct: 208 EYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDG 267

Query: 307 LC-LKGN--LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
            C L GN  + KA ++L  MV ++  PN  T+  +I+G  K        +V   M ++  
Sbjct: 268 YCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDV 327

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   Y++LI+GL   GK  +A+ +  +M+  G +PN + Y +LI+G C+ G   EA +
Sbjct: 328 IPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALD 387

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +   +   G       Y+ L+  + + GK      + ++M +   V +   Y+ LI GLC
Sbjct: 388 MFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
            +G +  A+ ++ Q+ ++G  PD+V +  ++ G C+ G   +A  L  EM  +  K  P 
Sbjct: 448 RNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLK--PR 504

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSM-MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
             TYNI++   CK+ N+  + ++   M  +R    ++ + N+ L    +K +  +D    
Sbjct: 505 HLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKL-EDANML 563

Query: 603 LNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
           LNE                    ML+K L P   T+E V +E+
Sbjct: 564 LNE--------------------MLEKGLVPNRITYEIVKEEM 586



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 177/365 (48%), Gaps = 16/365 (4%)

Query: 68  EIFNSTPKLGSYQLGDSTFYSLIQHY---ANSGDFKSLEMVLYRMRREKRVVLEKSFIFI 124
           +++  +P + SY        +LI  Y     +G     + VL  M   +      +F  +
Sbjct: 250 KVYGYSPNVVSYN-------TLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNIL 302

Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
              + K   +  ++++F  M+D+      V ++NS++N +   G  + A+   + +V+A 
Sbjct: 303 IDGFWKDDNLPGSLKVFKEMLDQ-DVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSA- 360

Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
              + PN +T++ +I   C+ G++  A+ +F  +  +   P    Y  L+D  CK  ++D
Sbjct: 361 --GVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKID 418

Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
           +   L +EM+ +G  P   T+N LI GLC+NG +  A KL D +  KG LP+ VT++ L+
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKG-LPDLVTFHILM 477

Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME-ERKF 363
            G C +G   KA  LL  M      P  +TY  ++ G  K G       +   ME ER+ 
Sbjct: 478 EGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRL 537

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
            +N   Y+ L+ G  ++GK EDA  L  +M+EKG  PN + Y  + + +   G   + E 
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEG 597

Query: 424 ILFEM 428
            LF +
Sbjct: 598 HLFNV 602



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 150/285 (52%), Gaps = 26/285 (9%)

Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
           L+  L K+ ++ D   L+K+M+ +  +PN   ++ +I+ LC+ GK ++A +++ +M   G
Sbjct: 194 LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253

Query: 433 CAANAFTYSSLMKGFFE---SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
            + N  +Y++L+ G+ +   +GK +KA  + K+M +N    N   +++LI G  +D  L 
Sbjct: 254 YSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLP 313

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            +  V+ +ML +   P+V+ Y+S+I+GLCN G + EA+ + ++M+      QP++ TY+ 
Sbjct: 314 GSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMV--SAGVQPNLITYHS 371

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+N  CK   +  ++D+ +S+  +G  P     N+ + A                     
Sbjct: 372 LINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAY-------------------- 411

Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
             K  +   GF + E M ++ + P   T+  ++  LCR   I+AA
Sbjct: 412 -CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 217/473 (45%), Gaps = 23/473 (4%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   + PN  T+   I   CR   V+ A  L+  M       D+ T   L+ GLC++ R 
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  L  EM   G  P  VT+  LI+ L K G       L+  M  +G + + VTY  L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +  L  +G  D+    L   ++    PN VTY  +I+ L K     +  +VL+ MEE+  
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   +S++I+G  K G  + A +  + M E+G  PN V Y  LIDG  +    D A E
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  +M+  G   N F   SL+ G  ++GK  +A+ ++KD + +    + V Y+ LI GL 
Sbjct: 471 VYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G +  A     +++ R   PD V Y+  I+ LC  G  +EA     EM  +  K  PD
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLK--PD 588

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
             TYN ++ + C++   + ++ LL+ M      P+L+T N  +  L     A +     L
Sbjct: 589 QSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT-GAVEKAKYLL 647

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           NE+          S GF           SP + T  RV+Q   + +R+   ++
Sbjct: 648 NEM---------VSAGF-----------SPSSLTHRRVLQACSQSRRLDVILD 680



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 233/509 (45%), Gaps = 16/509 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRV---VLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI   A +G  K L  +L  M     V   V   + +      GK   V++ +R  
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF- 369

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGL--YHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
             + D         S N V   ++ + L   H   E    ++  +  +I PN +TF+ VI
Sbjct: 370 -ALSDNL-------SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
               + GL+D A +  R M  R   P++ TY TL+DG  K    D A+ +  +M  +G  
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
                 + L+NGL +NG++  A  L  +    G   + V Y TLI GL   G++  A   
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              ++    +P+ V Y   IN L  LG+  +    L  M       ++  Y+T+I    +
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCR 601

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           +G+   A+KL  +M     KPN + Y+ L+ GL   G  ++A+ +L EM++ G + ++ T
Sbjct: 602 KGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           +  +++   +S +    ++I + M       +   Y+ L+  LC  G  R+A +V  +ML
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G  PD + ++++I G C +  ++ A   + +M  L     P++ T+N LL  L     
Sbjct: 722 GSGIAPDTITFNALILGHCKSSHLDNAFATYAQM--LHQNISPNIATFNTLLGGLESVGR 779

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           I  +  +L  M   G +P+ +T +I  T 
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATG 808



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/533 (25%), Positives = 238/533 (44%), Gaps = 59/533 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  A  KAH V+EA ++   M +E      V +F+SV+N  ++ GL  +A E+   
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEM-EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
           +   K   I PN +T+  +I    +    D A++++ +M     + + +   +L++GL +
Sbjct: 440 M---KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 240 ENRLDEAVLLLDEMQ--------------VDGCF---------------------PTPVT 264
             +++EA+ L  +                +DG F                     P  V 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NV IN LC  G+   A   +  M   G  P++ TYNT+I   C KG   KA+ LL  M 
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKA 383
            S   PN +TY T++ GL   G AV+ A+ L++ M    F  +   +  ++    +  + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTG-AVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +  + + + MM  G   +  VY+ L+  LC  G   +A  +L EM+ +G A +  T+++L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  +S     A   +  M   N   N   ++ L+ GL   G++ EA  V  +M   G 
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +P+ + Y  +  G     +  EA++L+ EM  +     P V TYN L++   K   ++ +
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEM--VGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTA----------------LKEKLEAPQDGT 600
            +L   M  RG  P   T +I ++                 +KEK  +P  GT
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 178/384 (46%), Gaps = 19/384 (4%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I  +   GL   AI+ FR     +    +Y++C L         L  A+ LL   +   
Sbjct: 52  LIPALATSGLAAAAIR-FRPADPASLNALLYSHCRL-------RLLRPAIALLRSSR--- 100

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
             PT V +N+L+  L  +     A  ++  M  +G   + VT NTL+ GLC  G +D A 
Sbjct: 101 --PTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
           +L DR      + + + + T+I G  ++G       V   M  +   ++   Y+TL++G 
Sbjct: 156 ALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGF 214

Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
            + G+ + A  +   M E G  PN   Y+  I   CR    +EA ++   M+ NG   + 
Sbjct: 215 CRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274

Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
            T S+L+ G    G+  +A  ++++M K     N V Y  LI  L + G+ +E   +  +
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGE 334

Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQ 557
           M+SRG   D+V Y++++  L   G  +E          L     P+  TY +L++ALCK 
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLR--FALSDNLSPNGVTYTVLIDALCKA 392

Query: 558 SNISHSIDLLNSMMDRGCDPDLVT 581
            N+  +  +L  M ++   P++VT
Sbjct: 393 HNVDEAEQVLLEMEEKSISPNVVT 416



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 165/377 (43%), Gaps = 3/377 (0%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N  +N +   G +  A  F   + N   M + P+  T+N +I + CR G    A++L  
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRN---MGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM + + +P++ TY TL+ GL     +++A  LL+EM   G  P+ +T   ++    ++ 
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L     + + M   G   +   YNTL+  LC  G   KA  +L+ M+ S   P+ +T+ 
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +I G  K     +       M  +    N   ++TL+ GL   G+  +A  +  +M + 
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G +PN + Y  L  G  +     EA  +  EM+  G      TY++L+  F ++G   +A
Sbjct: 794 GLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            E++KDM K         Y +L+ G        E +     M  +G  P     S +   
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913

Query: 517 LCNAGSVEEALKLFNEM 533
               G   +A +L   +
Sbjct: 914 FSKPGMTWQAQRLLKNL 930



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 120/300 (40%), Gaps = 22/300 (7%)

Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
           Y+ L++ L     A   +    +M ++G   + V  + L+ GLCR G+ D A   L +  
Sbjct: 106 YNILLAALSDHAHAPAVLA---EMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA-LADRG 161

Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
               A +   +++L+ G+   G    A+ +   M       + V Y+ L+ G C  G++ 
Sbjct: 162 GGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVD 221

Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
            AR V   M   G  P+V  Y+  I   C    VEEA  L+  M  +      DV T + 
Sbjct: 222 AARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGM--VRNGVLLDVVTLSA 279

Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
           L+  LC+    S +  L   M   G  P+ VT    + +L  K    ++    L E+  R
Sbjct: 280 LVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLA-KAGRGKELLSLLGEMVSR 338

Query: 610 ---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
                          L K+ +T      +   L   LSP   T+  ++  LC+   +  A
Sbjct: 339 GVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEA 398



 Score = 45.1 bits (105), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  Y  +V       +P   T+N +I    + G++  A +LF++M  R   P   TY  
Sbjct: 818 AMRLYCEMVGK---GFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDI 874

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           L+ G  +     E    L +M+  G  P+  T + +     K G   +A +L+ N++
Sbjct: 875 LVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLY 931


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/473 (29%), Positives = 217/473 (45%), Gaps = 23/473 (4%)

Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
           K   + PN  T+   I   CR   V+ A  L+  M       D+ T   L+ GLC++ R 
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
            EA  L  EM   G  P  VT+  LI+ L K G       L+  M  +G + + VTY  L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
           +  L  +G  D+    L   ++    PN VTY  +I+ L K     +  +VL+ MEE+  
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSI 410

Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
             N   +S++I+G  K G  + A +  + M E+G  PN V Y  LIDG  +    D A E
Sbjct: 411 SPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALE 470

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
           +  +M+  G   N F   SL+ G  ++GK  +A+ ++KD + +    + V Y+ LI GL 
Sbjct: 471 VYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLF 530

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           + G +  A     +++ R   PD V Y+  I+ LC  G  +EA     EM  +  K  PD
Sbjct: 531 KAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLK--PD 588

Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
             TYN ++ + C++   + ++ LL+ M      P+L+T N  +  L     A +     L
Sbjct: 589 QSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT-GAVEKAKYLL 647

Query: 604 NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
           NE+          S GF           SP + T  RV+Q   + +R+   ++
Sbjct: 648 NEM---------VSAGF-----------SPSSLTHRRVLQACSQSRRLDVILD 680



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 134/509 (26%), Positives = 233/509 (45%), Gaps = 16/509 (3%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRV---VLEKSFIFIFKAYGKAHLVEEAIRLF 141
           T+ +LI   A +G  K L  +L  M     V   V   + +      GK   V++ +R  
Sbjct: 311 TYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF- 369

Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGL--YHRALEFYNHIVNAKHMNILPNTLTFNLVI 199
             + D         S N V   ++ + L   H   E    ++  +  +I PN +TF+ VI
Sbjct: 370 -ALSDNL-------SPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVI 421

Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
               + GL+D A +  R M  R   P++ TY TL+DG  K    D A+ +  +M  +G  
Sbjct: 422 NGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVK 481

Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
                 + L+NGL +NG++  A  L  +    G   + V Y TLI GL   G++  A   
Sbjct: 482 VNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKF 541

Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
              ++    +P+ V Y   IN L  LG+  +    L  M       ++  Y+T+I    +
Sbjct: 542 GQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCR 601

Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
           +G+   A+KL  +M     KPN + Y+ L+ GL   G  ++A+ +L EM++ G + ++ T
Sbjct: 602 KGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLT 661

Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
           +  +++   +S +    ++I + M       +   Y+ L+  LC  G  R+A +V  +ML
Sbjct: 662 HRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEML 721

Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
             G  PD + ++++I G C +  ++ A   + +M  L     P++ T+N LL  L     
Sbjct: 722 GSGIAPDTITFNALILGHCKSSHLDNAFATYAQM--LHQNISPNIATFNTLLGGLESVGR 779

Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
           I  +  +L  M   G +P+ +T +I  T 
Sbjct: 780 IGEAGTVLIEMEKSGLEPNNLTYDILATG 808



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 139/533 (26%), Positives = 230/533 (43%), Gaps = 59/533 (11%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
           ++  +  A  KAH V+EA ++   M +E      V +F+SV+N  ++ GL  +A E+   
Sbjct: 381 TYTVLIDALCKAHNVDEAEQVLLEM-EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRM 439

Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRL---------------------------------- 205
           +   K   I PN +T+  +I    +                                   
Sbjct: 440 M---KERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 206 -GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
            G ++ A+ LF++        D   Y TL+DGL K   +  A     E+      P  V 
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVV 556

Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
           +NV IN LC  G+   A   +  M   G  P++ TYNT+I   C KG   KA+ LL  M 
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMK 616

Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFKEGKA 383
            S   PN +TY T++ GL   G AV+ A+ L++ M    F  +   +  ++    +  + 
Sbjct: 617 MSSIKPNLITYNTLVAGLFGTG-AVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRL 675

Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
           +  + + + MM  G   +  VY+ L+  LC  G   +A  +L EM+ +G A +  T+++L
Sbjct: 676 DVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNAL 735

Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
           + G  +S     A   +  M   N   N   ++ L+ GL   G++ EA  V  +M   G 
Sbjct: 736 ILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGL 795

Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
           +P+ + Y  +  G     +  EA++L+ EM  +     P V TYN L++   K   ++ +
Sbjct: 796 EPNNLTYDILATGHGKQSNKVEAMRLYCEM--VGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTA----------------LKEKLEAPQDGT 600
            +L   M  RG  P   T +I ++                 +KEK  +P  GT
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 188/420 (44%), Gaps = 56/420 (13%)

Query: 198 VIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
           +I  +   GL   AI+ FR     +    +Y++C L         L  A+ LL   +   
Sbjct: 52  LIPALATSGLAAAAIR-FRPADPASLNALLYSHCRL-------RLLRPAIALLRSSR--- 100

Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL---- 313
             PT V +N+L+  L  +     A  ++  M  +G   + VT NTL+ GLC  G +    
Sbjct: 101 --PTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 314 ------------------------------DKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
                                           A+S+ DRM A     + V Y T++ G  
Sbjct: 156 ALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 344 KLGRAVDGAR-VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
           + G+ VD AR VL  M+E     N   Y+  I    +    E+A  L++ M+  G   + 
Sbjct: 216 RAGQ-VDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDV 274

Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
           V  SAL+ GLCR G+  EA  +  EM   G A N  TY +L+    ++G+G + + +  +
Sbjct: 275 VTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGE 334

Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
           M     V + V Y+ L+  L + GK  E +      LS    P+ V Y+ +I  LC A +
Sbjct: 335 MVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHN 394

Query: 523 VEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
           V+EA ++  EM   E KS  P+V T++ ++N   K+  +  + +    M +RG +P++VT
Sbjct: 395 VDEAEQVLLEM---EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 165/377 (43%), Gaps = 3/377 (0%)

Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
           +N  +N +   G +  A  F   + N   M + P+  T+N +I + CR G    A++L  
Sbjct: 557 YNVFINCLCMLGKFKEAKSFLTEMRN---MGLKPDQSTYNTMIVSHCRKGETAKALKLLH 613

Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
           EM + + +P++ TY TL+ GL     +++A  LL+EM   G  P+ +T   ++    ++ 
Sbjct: 614 EMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSR 673

Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
            L     + + M   G   +   YNTL+  LC  G   KA  +L+ M+ S   P+ +T+ 
Sbjct: 674 RLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFN 733

Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
            +I G  K     +       M  +    N   ++TL+ GL   G+  +A  +  +M + 
Sbjct: 734 ALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKS 793

Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
           G +PN + Y  L  G  +     EA  +  EM+  G      TY++L+  F ++G   +A
Sbjct: 794 GLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQA 853

Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
            E++KDM K         Y +L+ G        E +     M  +G  P     S +   
Sbjct: 854 KELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRA 913

Query: 517 LCNAGSVEEALKLFNEM 533
               G   +A +L   +
Sbjct: 914 FSKPGMTWQAQRLLKNL 930



 Score = 45.1 bits (105), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
           A+  Y  +V       +P   T+N +I    + G++  A +LF++M  R   P   TY  
Sbjct: 818 AMRLYCEMVGK---GFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDI 874

Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF 289
           L+ G  +     E    L +M+  G  P+  T + +     K G   +A +L+ N++
Sbjct: 875 LVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLY 931


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 136/496 (27%), Positives = 234/496 (47%), Gaps = 62/496 (12%)

Query: 88  SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
           +++  +   G  +  E ++ RMR +       +F     A  KA  V +A R+F  M ++
Sbjct: 212 TVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQED 271

Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
           +                 Q GL                    P+ +TF++++   C  G 
Sbjct: 272 W-----------------QHGLPR------------------PDQVTFDVMLSGFCDAGF 296

Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
           VD A  L   M        + +Y   + GL +  R+ EA  LL EM  +G  P   T+N+
Sbjct: 297 VDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNI 356

Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCL-PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVAS 326
           +++GLCK G+    A+ V+N    G + P+ VTY +L+H  C KGN+  A  +LD M   
Sbjct: 357 IVSGLCKEGK-AFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQK 415

Query: 327 KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
            C PN  TY  ++  L + GR  +  R+L  M E+ + ++    + +I GL +  + + A
Sbjct: 416 GCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVA 475

Query: 387 MKLWKQMMEKG-----------------------CKPNTVVYSALIDGLCRVGKPDEAEE 423
           M +   M E+G                       C P+ + YS LI  LC+ G+ DEA++
Sbjct: 476 MDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKK 535

Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
            L EMI    + ++  Y + + G+ + GK   A+++ +DM K  C  +   Y++LI G  
Sbjct: 536 KLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFE 595

Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
           E  K  E   + ++M  +G  P+V+ Y+S+I   C  G V +A+ L +EM  L+ +  P+
Sbjct: 596 EKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEM--LQNELVPN 653

Query: 544 VFTYNILLNALCKQSN 559
           + ++++L+ A CK ++
Sbjct: 654 ITSFDLLIKAYCKITD 669



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 227/512 (44%), Gaps = 70/512 (13%)

Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCK---RTVKSFNSVLNVIIQEGLYHRALEF 176
           +F  +   +  A  V+EA      +VD   C    R V+S+N  L+ +++ G    A E 
Sbjct: 283 TFDVMLSGFCDAGFVDEA----RVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQEL 338

Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
              +    H  I PN+ T+N+++  +C+ G   +A ++   +      PD+ TY +L+  
Sbjct: 339 LREMA---HEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHA 395

Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
            C +  +  A  +LDEM   GC P   T+NVL+  L + G    A +L++ M  KG   +
Sbjct: 396 YCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLD 455

Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRM-----------------------VASKCMPNEV 333
               N +I GLC    LD A+ ++D M                       ++ +C+P+++
Sbjct: 456 TAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQI 515

Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
           TY  +I+ L K GR  +  + L+ M  +    +  IY T I G  K GK   A+K+ + M
Sbjct: 516 TYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM 575

Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
            +KGC P+T  Y+ LI G     K +E  +++ EM   G + N  TY+SL+K F + G  
Sbjct: 576 EKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMV 635

Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV----- 508
           +KA+ +  +M +N  V N   + +LI   C+      A+MV+   L    + +V+     
Sbjct: 636 NKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMC 695

Query: 509 -----------------------------AYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
                                         Y  +I GLC  G V+ A  L   ++     
Sbjct: 696 TELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHL 755

Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
             P  F    +++AL  +      +D+L++ M
Sbjct: 756 FDPAAFMP--VIDALGDRGK-KQDVDMLSAKM 784



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/567 (24%), Positives = 234/567 (41%), Gaps = 136/567 (23%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           P T  +N +I    R   +D    L++++ +   +PD++T   L+  LC   R++ A  +
Sbjct: 108 PTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRV 167

Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP--NEVTYNTLIHGL 307
            D M     F    +F +L  G C+ G    A K++D M      P  N V  NT++ G 
Sbjct: 168 FDAMPARNEF----SFGILARGYCRAGRSIDALKVLDGM------PSMNLVVCNTVVAGF 217

Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH--- 364
           C +G +++A  L++RM      PN VT+   I+ L K GR +D  R+   M+E   H   
Sbjct: 218 CKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLP 277

Query: 365 -------------------VNEY-----------------IYSTLISGLFKEGKAEDAMK 388
                              V+E                   Y+  +SGL + G+  +A +
Sbjct: 278 RPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQE 337

Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGK-----------------PD------------ 419
           L ++M  +G +PN+  Y+ ++ GLC+ GK                 PD            
Sbjct: 338 LLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYC 397

Query: 420 ------EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
                  A  IL EM   GCA N+FTY+ L++  + +G+  +A  + + M +     +  
Sbjct: 398 SKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTA 457

Query: 474 CYSVLIHGLCEDGKLREA-----------------------RMVWTQMLSRGCKPDVVAY 510
             +++I GLC + +L  A                        +V    +S+ C PD + Y
Sbjct: 458 GCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITY 517

Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
           S +I  LC  G  +EA K   EM+  +    PD   Y+  ++  CK    S +I +L  M
Sbjct: 518 SILISALCKEGRFDEAKKKLLEMIVKD--ISPDSVIYDTFIHGYCKHGKTSLAIKVLRDM 575

Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
             +GC+P   T N+ +   +EK                      ++    K++  M +K 
Sbjct: 576 EKKGCNPSTRTYNLLIRGFEEK---------------------HKSEEIMKLMSEMKEKG 614

Query: 631 LSPQTSTWERVVQELCRPKRIQAAINK 657
           +SP   T+  +++  C+    Q  +NK
Sbjct: 615 ISPNVMTYNSLIKSFCQ----QGMVNK 637



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/380 (23%), Positives = 161/380 (42%), Gaps = 57/380 (15%)

Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
           PN+ T+N++++++ R G    A +L   M  +    D      ++DGLC+ +RLD A+ +
Sbjct: 419 PNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDI 478

Query: 250 LDEMQVDG-----------------------CFPTPVTFNVLINGLCKNGELGRAAKLVD 286
           +D M  +G                       C P  +T+++LI+ LCK G    A K + 
Sbjct: 479 VDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLL 538

Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
            M +K   P+ V Y+T IHG C  G    A+ +L  M    C P+  TY  +I G  +  
Sbjct: 539 EMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKH 598

Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
           ++ +  +++  M+E+    N   Y++LI    ++G    AM L  +M++    PN   + 
Sbjct: 599 KSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFD 658

Query: 407 ALIDGLCRV----------------------------------GKPDEAEEILFEMINNG 432
            LI   C++                                  GK  EA+ IL   +   
Sbjct: 659 LLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELTTYGKWIEAKNILEMALEMR 718

Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
            +  +F Y  ++ G  E G+   A  + K +     +++   +  +I  L + GK ++  
Sbjct: 719 VSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVD 778

Query: 493 MVWTQMLSRGCKPDVVAYSS 512
           M+  +M+    + D +   S
Sbjct: 779 MLSAKMMEMADRNDGLGTDS 798



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 173/398 (43%), Gaps = 53/398 (13%)

Query: 85  TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
           T+ SL+  Y + G+  +   +L  M ++       ++  + ++  +A    EA RL   M
Sbjct: 388 TYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERM 447

Query: 145 ------VDEFHCKRTVKSF--NSVLNVI--IQEGLYHRALEFYNHIVNA---------KH 185
                 +D   C   +     NS L+V   I +G++         + N+           
Sbjct: 448 NEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSIS 507

Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
              LP+ +T++++I  +C+ G  D A +   EM V++  PD   Y T + G CK  +   
Sbjct: 508 QRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSL 567

Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
           A+ +L +M+  GC P+  T+N+LI G  +  +     KL+  M  KG  PN +TYN+LI 
Sbjct: 568 AIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIK 627

Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPN---------------------------------- 331
             C +G ++KA+ LLD M+ ++ +PN                                  
Sbjct: 628 SFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQK 687

Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
           EV Y  +   L   G+ ++   +L    E +  +  + Y  +ISGL + G+ + A  L K
Sbjct: 688 EVLYCLMCTELTTYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLK 747

Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
            ++ K    +   +  +ID L   GK  + + +  +M+
Sbjct: 748 LLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSAKMM 785


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.136    0.409 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,935,266,136
Number of Sequences: 23463169
Number of extensions: 401014428
Number of successful extensions: 1165131
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7505
Number of HSP's successfully gapped in prelim test: 5055
Number of HSP's that attempted gapping in prelim test: 883126
Number of HSP's gapped (non-prelim): 80922
length of query: 664
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 515
effective length of database: 8,863,183,186
effective search space: 4564539340790
effective search space used: 4564539340790
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)