BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 006010
(664 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 863 bits (2231), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/603 (66%), Positives = 494/603 (81%), Gaps = 2/603 (0%)
Query: 62 EQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF 121
E P S+++F S PK+GS++LGDST S+I+ YANSGDF S+E +L R+R E RV++E+SF
Sbjct: 56 EAPISEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSF 115
Query: 122 IFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIV 181
I +F+AYGKAHL ++A+ LFH MVDEF CKR+VKSFNSVLNVII EGLYHR LEFY+++V
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175
Query: 182 NAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
N+ +MNI PN L+FNLVIK +C+L VD AI++FR MP R C PD YTYCTLMDGLCKE
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
R+DEAVLLLDEMQ +GC P+PV +NVLI+GLCK G+L R KLVDNMFLKGC+PNEVTY
Sbjct: 236 ERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTY 295
Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
NTLIHGLCLKG LDKAVSLL+RMV+SKC+PN+VTYGT+INGLVK RA D R+L SMEE
Sbjct: 296 NTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE 355
Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
R +H+N++IYS LISGLFKEGKAE+AM LW++M EKGCKPN VVYS L+DGLCR GKP+E
Sbjct: 356 RGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNE 415
Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
A+EIL MI +GC NA+TYSSLMKGFF++G +AV++WK+M K C N+ CYSVLI
Sbjct: 416 AKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLID 475
Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL-EPK 539
GLC G+++EA MVW++ML+ G KPD VAYSS+I GLC GS++ ALKL++EMLC EPK
Sbjct: 476 GLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPK 535
Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
SQPDV TYNILL+ LC Q +IS ++DLLNSM+DRGCDPD++TCN FL L EK + G
Sbjct: 536 SQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKG 595
Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCW 659
FL EL +RL KRQR SG IVEVML K+L+P+TSTW +V+E+C+PK+I AAI+KCW
Sbjct: 596 RSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCW 655
Query: 660 SNL 662
NL
Sbjct: 656 RNL 658
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 301 bits (772), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 188/598 (31%), Positives = 305/598 (51%), Gaps = 26/598 (4%)
Query: 66 SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIF 125
S E+F+ T Y+ + LI +G+FK+++ +L +M+ E V E FI I
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153
Query: 126 KAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKH 185
+ Y KA + RL M + + C+ T KS+N VL +++ + A + +++ K
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK- 212
Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
I P TF +V+K C + +D+A+ L R+M C P+ Y TL+ L K NR++E
Sbjct: 213 --IPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNE 270
Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
A+ LL+EM + GC P TFN +I GLCK + AAK+V+ M ++G P+++TY L++
Sbjct: 271 ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMN 330
Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
GLC G +D A L R+ P V + T+I+G V GR D VL M V
Sbjct: 331 GLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 366 NEY-IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
+ Y++LI G +KEG A+++ M KGCKPN Y+ L+DG C++GK DEA +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
L EM +G N ++ L+ F + + +AVEI+++M + C + ++ LI GLCE
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCE 506
Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
+++ A + M+S G + V Y+++I+ G ++EA KL NEM+ S D
Sbjct: 507 VDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF--QGSPLDE 564
Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLN 604
TYN L+ LC+ + + L M+ G P ++CNI + L ++ +F
Sbjct: 565 ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRS-GMVEEAVEFQK 623
Query: 605 ELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
E+ +R L + R G + + + + P T T+ ++ LC+
Sbjct: 624 EMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 221/443 (49%), Gaps = 44/443 (9%)
Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
++ ++ K V+ A LF+ + K + FN++++ + G A +
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIP-----KPEIVIFNTLIHGFVTHGRLDDAKAVLSD 378
Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
+V + I+P+ T+N +I + GLV A+++ +M + C+P++Y+Y L+DG CK
Sbjct: 379 MVTS--YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
++DEA +L+EM DG P V FN LI+ CK + A ++ M KGC P+ T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
+N+LI GLC + A+ LL M++ + N VTY T+IN ++ G + +++ M
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
+ ++E Y++LI GL + G+ + A L+++M+ G P+ + + LI+GLCR G +
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
EA E EM+ G + T++SL I
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSL-----------------------------------I 641
Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
+GLC G++ + ++ ++ + G PD V +++++ LC G V +A L +E +E
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDE--GIEDG 699
Query: 540 SQPDVFTYNILLNALCKQSNISH 562
P+ T++ILL ++ Q +
Sbjct: 700 FVPNHRTWSILLQSIIPQETLDR 722
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 210/411 (51%), Gaps = 9/411 (2%)
Query: 83 DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
D T+ L+ G + + + YR+ + + +V+ + I F +G+ +++A +
Sbjct: 322 DITYGYLMNGLCKIGRVDAAKDLFYRIPKPE-IVIFNTLIHGFVTHGR---LDDAKAVLS 377
Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
MV + V ++NS++ +EGL ALE + + N PN ++ +++
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK---GCKPNVYSYTILVDGF 434
Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
C+LG +D A + EM +P+ + L+ CKE+R+ EAV + EM GC P
Sbjct: 435 CKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDV 494
Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
TFN LI+GLC+ E+ A L+ +M +G + N VTYNTLI+ +G + +A L++
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY-STLISGLFKEG 381
MV +E+TY ++I GL + G VD AR L R H I + LI+GL + G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGE-VDKARSLFEKMLRDGHAPSNISCNILINGLCRSG 613
Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
E+A++ K+M+ +G P+ V +++LI+GLCR G+ ++ + ++ G + T++
Sbjct: 614 MVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFN 673
Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
+LM + G + A + + ++ V N +S+L+ + L R
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 131/252 (51%), Gaps = 5/252 (1%)
Query: 64 PFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF 123
P + EIF P+ G + TF SLI + K +L M E V ++
Sbjct: 476 PEAVEIFREMPRKGC-KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
+ A+ + ++EA +L + MV + + ++NS++ + + G +A + ++
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEI-TYNSLIKGLCRAGEVDKARSLFEKMLRD 593
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
H P+ ++ N++I +CR G+V+ A++ +EM +R PDI T+ +L++GLC+ R+
Sbjct: 594 GHA---PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
++ + + ++Q +G P VTFN L++ LCK G + A L+D G +PN T++ L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 304 IHGLCLKGNLDK 315
+ + + LD+
Sbjct: 711 LQSIIPQETLDR 722
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 290 bits (741), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 179/634 (28%), Positives = 323/634 (50%), Gaps = 20/634 (3%)
Query: 24 TLSLTTIPSERSHRFFSVRSAVSSNKQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGD 83
+ SL P + F S SA S+ ++ ++ + + +FN K ++
Sbjct: 24 SFSLNLTPPSSTISFASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKKPNFSPEP 83
Query: 84 STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
+ + ++ SG F ++ +L M+ + + +F+ + ++Y + L +E + +
Sbjct: 84 ALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDW 143
Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
M+DEF K +N +LN+++ +G + +E + ++ I P+ TFN++IK +C
Sbjct: 144 MIDEFGLKPDTHFYNRMLNLLV-DGNSLKLVEISHAKMSV--WGIKPDVSTFNVLIKALC 200
Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
R + AI + +MP PD T+ T+M G +E LD A+ + ++M GC + V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260
Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLK-GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
+ NV+++G CK G + A + M + G P++ T+NTL++GLC G++ A+ ++D
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320
Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
M+ P+ TY ++I+GL KLG + VL M R N Y+TLIS L KE +
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
E+A +L + + KG P+ +++LI GLC A E+ EM + GC + FTY+
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
L+ GK +A+ + K M + C + + Y+ LI G C+ K REA ++ +M G
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 503 CKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISH 562
+ V Y+++I GLC + VE+A +L ++M+ +PD +TYN LL C+ +I
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIM--EGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQ-DGTDF----LNELAI 608
+ D++ +M GC+PD+VT ++ L + L + Q G + N +
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
LF++++T+ + ML++ +P + R+V
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIV 652
Score = 243 bits (619), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 164/526 (31%), Positives = 258/526 (49%), Gaps = 38/526 (7%)
Query: 84 STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
STF LI+ + + ++L M V EK+F + + Y + ++ A+R+
Sbjct: 190 STFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQ 249
Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF----------------YNHIVNA---- 183
MV EF C + S N +++ +EG AL F +N +VN
Sbjct: 250 MV-EFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKA 308
Query: 184 ---KH----MNIL------PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTY 230
KH M+++ P+ T+N VI +C+LG V A+++ +M R+C P+ TY
Sbjct: 309 GHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTY 368
Query: 231 CTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
TL+ LCKEN+++EA L + G P TFN LI GLC A +L + M
Sbjct: 369 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRS 428
Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
KGC P+E TYN LI LC KG LD+A+++L +M S C + +TY T+I+G K + +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 351 GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALID 410
+ ME N Y+TLI GL K + EDA +L QM+ +G KP+ Y++L+
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 411 GLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY 470
CR G +A +I+ M +NGC + TY +L+ G ++G+ A ++ + +
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 471 NEVCYSVLIHGLCEDGKLREARMVWTQMLSRG-CKPDVVAYSSMIHGLCNAGS-VEEALK 528
Y+ +I GL K EA ++ +ML + PD V+Y + GLCN G + EA+
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVD 668
Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
E+ LE P+ + +L L S + L+N +M +
Sbjct: 669 FLVEL--LEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 185/381 (48%), Gaps = 24/381 (6%)
Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
P Y ++ L G+ D +L+ M +S+C T+ +I + + V
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 355 LMSM-EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTVVYSALIDGL 412
+ M +E + + Y+ +++ L +G + +++ M G KP+ ++ LI L
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLN-LLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
CR + A +L +M + G + T++++M+G+ E G A+ I + M + C ++
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFN 531
V +V++HG C++G++ +A +M ++ G PD ++++++GLC AG V+ A+++ +
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319
Query: 532 EMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL-- 589
ML + PDV+TYN +++ LCK + ++++L+ M+ R C P+ VT N ++ L
Sbjct: 320 VML--QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 590 KEKLEAPQDGTDFLNELAIR--------------LFKRQRTSGGFKIVEVMLQKFLSPQT 635
+ ++E + L I L + R + ++ E M K P
Sbjct: 378 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA--MELFEEMRSKGCEPDE 435
Query: 636 STWERVVQELCRPKRIQAAIN 656
T+ ++ LC ++ A+N
Sbjct: 436 FTYNMLIDSLCSKGKLDEALN 456
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 124/296 (41%), Gaps = 27/296 (9%)
Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
F +Y ++ L + G +D K+ + M C+ T + LI+ + DE
Sbjct: 79 FSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEIL 138
Query: 423 EILFEMINN-GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV-CYSVLIH 480
++ MI+ G + Y+ ++ G K VEI + +V ++VLI
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLN-LLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
LC +LR A ++ M S G PD +++++ G G ++ AL++ +M+ E
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMV--EFGC 255
Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDR-GCDPDLVTCNIFLTALKEKLEAPQDG 599
+ N++++ CK+ + +++ + M ++ G PD T N + L
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL---------- 305
Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
K +I++VMLQ+ P T+ V+ LC+ ++ A+
Sbjct: 306 -----------CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 280 bits (715), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 171/588 (29%), Positives = 296/588 (50%), Gaps = 28/588 (4%)
Query: 68 EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRRE-KRVVLEKSFIFIFK 126
E+FNS K ++ ST+ S+I+ G F+++E VL MR +LE ++ K
Sbjct: 25 EMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMK 84
Query: 127 AYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHM 186
YG+ V+EA+ +F M D + C+ TV S+N++++V++ G + +A + Y + +
Sbjct: 85 NYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVY---MRMRDR 140
Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
I P+ +F + +K+ C+ A++L M + CE ++ YCT++ G +EN E
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
L +M G TFN L+ LCK G++ KL+D + +G LPN TYN I G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
LC +G LD AV ++ ++ P+ +TY +I GL K + + L M +
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
Y Y+TLI+G K G + A ++ + G P+ Y +LIDGLC G+ + A +
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFN 380
Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG 486
E + G N Y++L+KG G +A ++ +M++ + +++L++GLC+ G
Sbjct: 381 EALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG 440
Query: 487 KLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFT 546
+ +A + M+S+G PD+ ++ +IHG +E AL++ + M L+ PDV+T
Sbjct: 441 CVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM--LDNGVDPDVYT 498
Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
YN LLN LCK S ++ +M+++GC P+L T NI L +
Sbjct: 499 YNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLES------------------ 540
Query: 607 AIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
L + ++ ++E M K ++P T+ ++ C+ + A
Sbjct: 541 ---LCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Score = 236 bits (602), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 164/619 (26%), Positives = 282/619 (45%), Gaps = 62/619 (10%)
Query: 68 EIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKA 127
+ ++ P + SY +++ +SG F V RMR SF K+
Sbjct: 103 DFYDCEPTVFSYN-------AIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKS 155
Query: 128 YGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK--- 184
+ K A+RL + M + C+ V ++ +V+ +E E + ++ +
Sbjct: 156 FCKTSRPHAALRLLNNMSSQ-GCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 185 -----------------------------HMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
+LPN T+NL I+ +C+ G +D A+++
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
+ + +PD+ TY L+ GLCK ++ EA + L +M +G P T+N LI G CK
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
G + A ++V + G +P++ TY +LI GLC +G ++A++L + + PN + Y
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
T+I GL G ++ A++ M E+ ++ L++GL K G DA L K M+
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
KG P+ ++ LI G K + A EIL M++NG + +TY+SL+ G ++ K
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
+E +K M + C N +++L+ LC KL EA + +M ++ PD V + ++I
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574
Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
G C G ++ A LF +M K TYNI+++A ++ N++ + L M+DR
Sbjct: 575 GFCKNGDLDGAYTLFRKME-EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
PD T + + DG K + G+K + M++ P
Sbjct: 634 GPDGYTYRLMV-----------DG----------FCKTGNVNLGYKFLLEMMENGFIPSL 672
Query: 636 STWERVVQELCRPKRIQAA 654
+T RV+ LC R+ A
Sbjct: 673 TTLGRVINCLCVEDRVYEA 691
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/498 (24%), Positives = 220/498 (44%), Gaps = 79/498 (15%)
Query: 84 STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLF 141
STF L++ GD K E +L ++ KR VL F + + + ++ A+R+
Sbjct: 217 STFNKLLRVLCKKGDVKECEKLLDKVI--KRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
++++ K V ++N+++ + + + A + +VN + P++ T+N +I
Sbjct: 275 GCLIEQ-GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNE---GLEPDSYTYNTLIAG 330
Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD----------------- 244
C+ G+V A ++ + PD +TY +L+DGLC E +
Sbjct: 331 YCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPN 390
Query: 245 ------------------EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD 286
EA L +EM G P TFN+L+NGLCK G + A LV
Sbjct: 391 VILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK 450
Query: 287 NMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLG 346
M KG P+ T+N LIHG + ++ A+ +LD M+ + P+ TY +++NGL K
Sbjct: 451 VMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTS 510
Query: 347 RAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
+ D +M E+ N + ++ L+ L + K ++A+ L ++M K P+ V +
Sbjct: 511 KFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFG 570
Query: 407 ALIDGLCRVGKPDEA------------------------------------EEILFEMIN 430
LIDG C+ G D A E++ EM++
Sbjct: 571 TLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
+ +TY ++ GF ++G + + +M +N + + +I+ LC + ++ E
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYE 690
Query: 491 ARMVWTQMLSRGCKPDVV 508
A + +M+ +G P+ V
Sbjct: 691 AAGIIHRMVQKGLVPEAV 708
Score = 111 bits (277), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 168/365 (46%), Gaps = 14/365 (3%)
Query: 86 FYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMV 145
+ +LI+ +N G + M + + ++F + K V +A L M+
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 146 DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRL 205
+ + + +FN +++ + ALE + +++ + P+ T+N ++ +C+
Sbjct: 454 SKGYFP-DIFTFNILIHGYSTQLKMENALEILDVMLDN---GVDPDVYTYNSLLNGLCKT 509
Query: 206 GLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF 265
++ ++ ++ M + C P+++T+ L++ LC+ +LDEA+ LL+EM+ P VTF
Sbjct: 510 SKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV-TYNTLIHGLCLKGNLDKAVSLLDRMV 324
LI+G CKNG+L A L M + + TYN +IH K N+ A L MV
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
P+ TY +++G K G G + L+ M E F + +I+ L E +
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE--ILFEMINNGCAANAFTYSS 442
+A + +M++KG P V + +C V K + A +L +++ C + Y
Sbjct: 690 EAAGIIHRMVQKGLVPEAV------NTICDVDKKEVAAPKLVLEDLLKKSCIT-YYAYEL 742
Query: 443 LMKGF 447
L G
Sbjct: 743 LFDGL 747
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 275 bits (703), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 147/411 (35%), Positives = 234/411 (56%), Gaps = 7/411 (1%)
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
P+ +T N ++ C + +A+ L +M +PD +T+ TL+ GL + NR EAV L
Sbjct: 149 PDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVAL 208
Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
+D M V GC P VT+ +++NGLCK G++ A L+ M P V YNT+I LC
Sbjct: 209 VDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN 268
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
N++ A++L M PN VTY ++I L GR D +R+L M ERK + N
Sbjct: 269 YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVT 328
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
+S LI KEGK +A KL+ +M+++ P+ YS+LI+G C + DEA+ + MI
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 388
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
+ C N TY++L+KGF ++ + + +E++++M++ V N V Y+ LIHG + +
Sbjct: 389 SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECD 448
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
A++V+ QM+S G PD++ YS ++ GLCN G VE AL +F + K +PD++TYNI
Sbjct: 449 NAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL--QRSKMEPDIYTYNI 506
Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT-----ALKEKLEA 595
++ +CK + DL S+ +G P++VT ++ LKE+ +A
Sbjct: 507 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Score = 242 bits (618), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 139/435 (31%), Positives = 222/435 (51%), Gaps = 5/435 (1%)
Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
+ + NS+LN A+ +V M P++ TFN +I + R A+
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMV---EMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
L M V+ C+PD+ TY +++GLCK +D A+ LL +M+ P V +N +I+ LC
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
+ A L M KG PN VTYN+LI LC G A LL M+ K PN V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327
Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
T+ +I+ VK G+ V+ ++ M +R + + YS+LI+G + ++A +++ M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387
Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
+ K C PN V Y+ LI G C+ + DE E+ EM G N TY++L+ GFF++ +
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447
Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
A ++K M + + + + YS+L+ GLC +GK+ A +V+ + +PD+ Y+ M
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507
Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
I G+C AG VE+ LF + K P+V TY +++ C++ + L M +
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVK--PNVVTYTTMMSGFCRKGLKEEADALFREMKEE 565
Query: 574 GCDPDLVTCNIFLTA 588
G PD T N + A
Sbjct: 566 GPLPDSGTYNTLIRA 580
Score = 233 bits (594), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/473 (30%), Positives = 232/473 (49%), Gaps = 37/473 (7%)
Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
A+ + +V ++ P+ + F+ ++ + ++ D I L +M ++YTY
Sbjct: 65 AVNLFGDMVKSRP---FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
L++ C+ ++L A+ +L +M G P VT N L+NG C + A LV M G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
P+ T+NTLIHGL +AV+L+DRMV C P+ VTYG ++NGL K G
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
+L ME+ K IY+T+I L DA+ L+ +M KG +PN V Y++LI L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
C G+ +A +L +MI N T+S+L+ F + GK +A +++ +M K + +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
YS LI+G C +L EA+ ++ M+S+ C P+VV Y+++I G C A V+E ++LF E
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 533 M---------------------------------LCLEPKSQPDVFTYNILLNALCKQSN 559
M + PD+ TY+ILL+ LC
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
+ ++ + + +PD+ T NI + + K +DG D L+++ K
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMC-KAGKVEDGWDLFCSLSLKGVK 533
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/416 (29%), Positives = 207/416 (49%), Gaps = 6/416 (1%)
Query: 120 SFIFIFKAYG--KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFY 177
SF F +G + + EA+ L MV + C+ + ++ V+N + + G AL
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVK-GCQPDLVTYGIVVNGLCKRGDIDLALSLL 244
Query: 178 NHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
+ K I P + +N +I +C V++A+ LF EM + P++ TY +L+ L
Sbjct: 245 KKMEQGK---IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
C R +A LL +M P VTF+ LI+ K G+L A KL D M + P+
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 361
Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS 357
TY++LI+G C+ LD+A + + M++ C PN VTY T+I G K R +G +
Sbjct: 362 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFRE 421
Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
M +R N Y+TLI G F+ + ++A ++KQM+ G P+ + YS L+DGLC GK
Sbjct: 422 MSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK 481
Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
+ A + + + + +TY+ +++G ++GK +++ ++ N V Y+
Sbjct: 482 VETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 541
Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
++ G C G EA ++ +M G PD Y+++I G + +L EM
Sbjct: 542 MMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 205/429 (47%), Gaps = 18/429 (4%)
Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
+LD+AV L +M FP+ V F+ L++ + K + L + M G N TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
LI+ C + L A+++L +M+ P+ VT +++NG R D ++ M E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
+ + + ++TLI GLF+ +A +A+ L +M+ KGC+P+ V Y +++GLC+ G D A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
+L +M Y++++ + A+ ++ +M N V Y+ LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
LC G+ +A + + M+ R P+VV +S++I G + EA KL++EM ++
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM--IKRSID 358
Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
PD+FTY+ L+N C + + + M+ + C P++VT N + K + +G +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC-KAKRVDEGME 417
Query: 602 FLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
E++ R F+ + + + M+ + P T+ ++ LC
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 647 RPKRIQAAI 655
+++ A+
Sbjct: 478 NNGKVETAL 486
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 156/348 (44%), Gaps = 62/348 (17%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
T+ SLI+ N G + +L M K +F + A+ K + EA +L+ M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 145 VDEFHCKRTVK----SFNSVLNVIIQEGLYHRALEFYNHIVNAKHM-------NILPNTL 193
+ KR++ +++S++N ++ + AKHM + PN +
Sbjct: 353 I-----KRSIDPDIFTYSSLIN----------GFCMHDRLDEAKHMFELMISKDCFPNVV 397
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMP--------------------VRNCE--------- 224
T+N +IK C+ VD ++LFREM R C+
Sbjct: 398 TYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Query: 225 ------PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
PDI TY L+DGLC +++ A+++ + +Q P T+N++I G+CK G++
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
L ++ LKG PN VTY T++ G C KG ++A +L M +P+ TY T+
Sbjct: 518 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDA 386
I ++ G A ++ M +F V + L++ + +G+ + +
Sbjct: 578 IRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVTNMLHDGRLDKS 624
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 140/309 (45%), Gaps = 18/309 (5%)
Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
R F Y Y + + K +DA+ L+ M++ P+ V +S L+ + ++ K D
Sbjct: 40 RDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL 99
Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
+ +M N G + N +TYS L+ F + A+ + M K + V + L++
Sbjct: 100 VISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLN 159
Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
G C ++ +A + QM+ G +PD ++++IHGL EA+ L + M+
Sbjct: 160 GFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVV--KGC 217
Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
QPD+ TY I++N LCK+ +I ++ LL M +P +V N + AL + D
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCN-YKNVNDAL 276
Query: 601 DFLNEL---AIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
+ E+ IR L R S +++ M+++ ++P T+ ++
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 646 CRPKRIQAA 654
+ ++ A
Sbjct: 337 VKEGKLVEA 345
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 23/201 (11%)
Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
AV ++ DM K+ + V +S L+ + + K + QM + G ++ YS +I+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
C + AL + +M+ L +PD+ T N LLN C + IS ++ L+ M++ G
Sbjct: 125 CFCRRSQLSLALAVLAKMMKL--GYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
PD T N + L F+ R S +V+ M+ K P
Sbjct: 183 QPDSFTFNTLIHGL---------------------FRHNRASEAVALVDRMVVKGCQPDL 221
Query: 636 STWERVVQELCRPKRIQAAIN 656
T+ VV LC+ I A++
Sbjct: 222 VTYGIVVNGLCKRGDIDLALS 242
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 269 bits (688), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 239/418 (57%), Gaps = 6/418 (1%)
Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
+P+ +T+N++I C+ G ++NA+ + M V PD+ TY T++ LC +L +A+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSV---SPDVVTYNTILRSLCDSGKLKQAME 225
Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
+LD M C+P +T+ +LI C++ +G A KL+D M +GC P+ VTYN L++G+C
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
+G LD+A+ L+ M +S C PN +T+ I+ + GR +D ++L M + F +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
++ LI+ L ++G A+ + ++M + GC+PN++ Y+ L+ G C+ K D A E L M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
++ GC + TY++++ + GK AVEI ++ C + Y+ +I GL + GK
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKT 465
Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
+A + +M ++ KPD + YSS++ GL G V+EA+K F+E + + P+ T+N
Sbjct: 466 GKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIR--PNAVTFN 523
Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
++ LCK +ID L M++RGC P+ + I + L + A ++ + LNEL
Sbjct: 524 SIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA-KEALELLNEL 580
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 228/450 (50%), Gaps = 42/450 (9%)
Query: 88 SLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE 147
+LI+ + G + +L + V ++ + Y KA + A+ +++D
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNAL----SVLDR 197
Query: 148 FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGL 207
V ++N++L + G +A+E + ++ + P+ +T+ ++I+ CR
Sbjct: 198 MSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML---QRDCYPDVITYTILIEATCRDSG 254
Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC--------- 258
V +A++L EM R C PD+ TY L++G+CKE RLDEA+ L++M GC
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 259 --------------------------FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
P+ VTFN+LIN LC+ G LGRA +++ M G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
C PN ++YN L+HG C + +D+A+ L+RMV+ C P+ VTY T++ L K G+ D
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
+L + + Y+T+I GL K GK A+KL +M K KP+T+ YS+L+ GL
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
R GK DEA + E G NA T++S+M G +S + +A++ M C NE
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRG 502
Y++LI GL +G +EA + ++ ++G
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/458 (27%), Positives = 234/458 (51%), Gaps = 26/458 (5%)
Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
++ + R G ++ + M PDI TL+ G C+ + +A +L+ ++ G
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGA 168
Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
P +T+NV+I+G CK GE+ A ++D M + P+ VTYNT++ LC G L +A+
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAME 225
Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
+LDRM+ C P+ +TY +I + ++L M +R + Y+ L++G+
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285
Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
KEG+ ++A+K M GC+PN + ++ ++ +C G+ +AE++L +M+ G + +
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345
Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
T++ L+ G +A++I + M ++ C N + Y+ L+HG C++ K+ A +M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405
Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
+SRGC PD+V Y++M+ LC G VE+A+++ N++ P + TYN +++ L K
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL--SSKGCSPVLITYNTVIDGLAKAG 463
Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
+I LL+ M + PD +T + + L + + + AI+ F G
Sbjct: 464 KTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE---------AIKFFHEFERMG 514
Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
+ P T+ ++ LC+ ++ AI+
Sbjct: 515 ------------IRPNAVTFNSIMLGLCKSRQTDRAID 540
Score = 167 bits (424), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 191/406 (47%), Gaps = 50/406 (12%)
Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
+V N + + G L++ L+ MV +P+ + T+I G +LG+ A++L
Sbjct: 102 DVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE 161
Query: 357 SMEERKFHVNEYIYSTLISG--------------------------------LFKEGKAE 384
+E + Y+ +ISG L GK +
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLK 221
Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
AM++ +M+++ C P+ + Y+ LI+ CR A ++L EM + GC + TY+ L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
G + G+ +A++ DM + C N + +++++ +C G+ +A + ML +G
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 505 PDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSI 564
P VV ++ +I+ LC G + A+ + +M + QP+ +YN LL+ CK+ + +I
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKM--PQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 565 DLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR--------------- 609
+ L M+ RGC PD+VT N LTAL + + +D + LN+L+ +
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKV-EDAVEILNQLSSKGCSPVLITYNTVIDG 458
Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
L K +T K+++ M K L P T T+ +V L R ++ AI
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 120/276 (43%), Gaps = 46/276 (16%)
Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
+ +N+ A ++ ++ +G+ + + ++M + V + + + LI G C
Sbjct: 91 YSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRL 150
Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------ 533
GK R+A + + G PDV+ Y+ MI G C AG + AL + + M
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTI 210
Query: 534 ---LC---------------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
LC L+ PDV TY IL+ A C+ S + H++ LL+ M DRGC
Sbjct: 211 LRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGC 270
Query: 576 DPDLVTCNIFLT----------ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF----- 620
PD+VT N+ + A+K + P G N + + R S G
Sbjct: 271 TPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ-PNVITHNIILRSMCSTGRWMDAE 329
Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
K++ ML+K SP T+ ++ LCR + AI+
Sbjct: 330 KLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 89/171 (52%), Gaps = 4/171 (2%)
Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
+ A K VE+A+ + + + + C + ++N+V++ + + G +A++ + +
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSK-GCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM--- 475
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
+ ++ P+T+T++ ++ + R G VD AI+ F E P+ T+ ++M GLCK +
Sbjct: 476 RAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQT 535
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
D A+ L M GC P ++ +LI GL G A +L++ + KG +
Sbjct: 536 DRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 265 bits (678), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 267/512 (52%), Gaps = 51/512 (9%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+++A+ LF MV V+ FN +L+ I + + + + N + I +
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVE-FNKLLSAIAKMNKFDLVISLGERMQN---LRISYDLY 116
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
++N++I CR + A+ + +M EPDI T +L++G C R+ EAV L+D+M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM 176
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
V P VTFN LI+GL + + A L+D M +GC P+ TY T+++GLC +G++
Sbjct: 177 FVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDI 236
Query: 314 DKAVSLLDRMVASKC-----------------------------------MPNEVTYGTI 338
D A+SLL +M K PN VTY ++
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
I L GR D +R+L M ERK + N +S LI KEGK +A KL+ +M+++
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
P+ YS+LI+G C + DEA+ + MI+ C N TY++L+KGF ++ + + +E
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
++++M++ V N V Y+ LI GL + G A+ ++ +M+S G PD++ YS ++ GLC
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLC 476
Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
G +E+AL +F + + K +PD++TYNI++ +CK + DL S+ +G P+
Sbjct: 477 KYGKLEKALVVFEYLQ--KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 579 LVTCNIFLT-----ALKEKLEA-----PQDGT 600
++ ++ LKE+ +A +DGT
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGT 566
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 247/480 (51%), Gaps = 26/480 (5%)
Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
A++ + +V ++ LP+ + FN ++ + ++ D I L M D+Y+Y
Sbjct: 64 AVDLFGEMVQSRP---LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
L++ C+ ++L A+ +L +M G P VT + L+NG C + A LVD MF+
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
PN VT+NTLIHGL L +AV+L+DRMVA C P+ TYGT++NGL K G
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
+L ME+ K + IY+T+I L DA+ L+ +M KG +PN V Y++LI L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
C G+ +A +L +MI N T+S+L+ F + GK +A +++ +M K + +
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
YS LI+G C +L EA+ ++ M+S+ C P+VV Y+++I G C A VEE ++LF E
Sbjct: 361 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFRE 420
Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
M + + TYN L+ L + + + + M+ G PD++T +I L
Sbjct: 421 M--SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILL------ 472
Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
DG L K + + E + + + P T+ +++ +C+ +++
Sbjct: 473 -----DG----------LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Score = 235 bits (600), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 132/403 (32%), Positives = 210/403 (52%), Gaps = 2/403 (0%)
Query: 186 MNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDE 245
M PNT+TFN +I + A+ L M R C+PD++TY T+++GLCK +D
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 246 AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIH 305
A+ LL +M+ V + +I+ LC + A L M KG PN VTYN+LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 306 GLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHV 365
LC G A LL M+ K PN VT+ +I+ VK G+ V+ ++ M +R
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 366 NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL 425
+ + YS+LI+G + ++A +++ M+ K C PN V Y+ LI G C+ + +E E+
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 426 FEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCED 485
EM G N TY++L++G F++G A +I+K M + + + YS+L+ GLC+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478
Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
GKL +A +V+ + +PD+ Y+ MI G+C AG VE+ LF + K P+V
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVK--PNVI 536
Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
Y +++ C++ + L M + G P+ T N + A
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 206 bits (525), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/477 (28%), Positives = 232/477 (48%), Gaps = 11/477 (2%)
Query: 60 KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANS---GDFKSLEMVLYRMRREKRVV 116
+S+ P + + KLG Y+ T SL+ Y + + +L ++ M + V
Sbjct: 128 RSQLPLALAVLGKMMKLG-YEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTV 186
Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
+ I + KA EA+ L MV C+ + ++ +V+N + + G AL
Sbjct: 187 TFNTLIHGLFLHNKA---SEAVALIDRMVAR-GCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
+ K I + + + +I +C V++A+ LF EM + P++ TY +L+
Sbjct: 243 LKKMEKGK---IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 299
Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
LC R +A LL +M P VTF+ LI+ K G+L A KL D M + P+
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
TY++LI+G C+ LD+A + + M++ C PN VTY T+I G K R +G +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
M +R N Y+TLI GLF+ G + A K++K+M+ G P+ + YS L+DGLC+ G
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYG 479
Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
K ++A + + + + +TY+ +++G ++GK +++ ++ N + Y+
Sbjct: 480 KLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYT 539
Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
+I G C G EA ++ +M G P+ Y+++I G + +L EM
Sbjct: 540 TMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 205 bits (522), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 128/416 (30%), Positives = 213/416 (51%), Gaps = 8/416 (1%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
T+ +++ GD +L +M + K + I A V +A+ LF M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
D + V ++NS++ + G + A + ++ K I PN +TF+ +I +
Sbjct: 282 -DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK---INPNVVTFSALIDAFVK 337
Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
G + A +L+ EM R+ +PDI+TY +L++G C +RLDEA + + M CFP VT
Sbjct: 338 EGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 397
Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
+N LI G CK + +L M +G + N VTYNTLI GL G+ D A + +MV
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
+ P+ +TY +++GL K G+ V +++ K + Y Y+ +I G+ K GK E
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
D L+ + KG KPN ++Y+ +I G CR G +EA+ + EM +G N+ TY++L+
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
+ G + E+ K+M V + S++I+ L DG+L ++ + +MLS
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKS---YLEMLS 629
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 190/416 (45%), Gaps = 62/416 (14%)
Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
+LD+AV L EM P+ V FN L++ + K + L + M + +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
LI+ C + L A+++L +M+ P+ VT +++NG
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNG-------------------- 159
Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
Y + IS +A+ L QM +PNTV ++ LI GL K EA
Sbjct: 160 ------YCHGKRIS---------EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEA 204
Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
++ M+ GC + FTY +++ G + G A+ + K M K + V Y+ +I
Sbjct: 205 VALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDA 264
Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
LC + +A ++T+M ++G +P+VV Y+S+I LCN G +A +L ++M +E K
Sbjct: 265 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM--IERKIN 322
Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDG 599
P+V T++ L++A K+ + + L + M+ R DPD+ T + + + ++L+ +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK-- 380
Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
+ E+M+ K P T+ +++ C+ KR++ +
Sbjct: 381 ---------------------HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 270/512 (52%), Gaps = 51/512 (9%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+++A+ LF MV ++ F+ +L+ I + + + + N + I N
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIE-FSKLLSAIAKMNKFDVVISLGEQMQN---LGIPHNHY 117
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T++++I CR + A+ + +M EP+I T +L++G C R+ EAV L+D+M
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
V G P VTFN LI+GL + + A L+D M KGC P+ VTY +++GLC +G+
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKL---------------------------- 345
D A +LL++M K P + Y TII+GL K
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Query: 346 -------GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
GR D +R+L M ERK + + + +S LI KEGK +A KL+ +M+++
Sbjct: 298 ISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
P+ V YS+LI+G C + DEA+++ M++ C + TY++L+KGF + + + +E
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
++++M++ V N V Y++LI GL + G A+ ++ +M+S G P+++ Y++++ GLC
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLC 477
Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
G +E+A+ +F + K +P ++TYNI++ +CK + DL ++ +G PD
Sbjct: 478 KNGKLEKAMVVFEYLQ--RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 579 LVTCNIFLTAL-----KEKLEA-----PQDGT 600
+V N ++ KE+ +A +DGT
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEMKEDGT 567
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/480 (31%), Positives = 252/480 (52%), Gaps = 26/480 (5%)
Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
A+ + +V ++ P+ + F+ ++ + ++ D I L +M + YTY
Sbjct: 65 AVALFGEMVKSRP---FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
L++ C+ ++L A+ +L +M G P VT + L+NG C + + A LVD MF+ G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
PN VT+NTLIHGL L +A++L+DRMVA C P+ VTYG ++NGL K G
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
+L ME+ K IY+T+I GL K +DA+ L+K+M KG +PN V YS+LI L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
C G+ +A +L +MI + FT+S+L+ F + GK +A +++ +M K + +
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
V YS LI+G C +L EA+ ++ M+S+ C PDVV Y+++I G C VEE +++F E
Sbjct: 362 VTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFRE 421
Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
M + + TYNIL+ L + + + ++ M+ G P+++T N L
Sbjct: 422 M--SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL------ 473
Query: 593 LEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
DG L K + + E + + + P T+ +++ +C+ +++
Sbjct: 474 -----DG----------LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 518
Score = 232 bits (591), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 143/468 (30%), Positives = 243/468 (51%), Gaps = 6/468 (1%)
Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
+ Y + + EA+ L M + TV +FN++++ + L+++A E I
Sbjct: 157 LLNGYCHSKRISEAVALVDQMFVTGYQPNTV-TFNTLIHGLF---LHNKASEAMALIDRM 212
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
P+ +T+ +V+ +C+ G D A L +M EP + Y T++DGLCK +
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
D+A+ L EM+ G P VT++ LI+ LC G A++L+ +M + P+ T++ L
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
I +G L +A L D MV P+ VTY ++ING R + ++ M +
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
+ Y+TLI G K + E+ M+++++M ++G NTV Y+ LI GL + G D A+E
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452
Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
I EM+++G N TY++L+ G ++GK KA+ +++ + ++ Y+++I G+C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
+ GK+ + ++ + +G KPDVVAY++MI G C GS EEA LF EM E + P+
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM--KEDGTLPN 570
Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
YN L+ A + + S +L+ M G D T + L +
Sbjct: 571 SGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 618
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 213/463 (46%), Gaps = 53/463 (11%)
Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
+D+A+ LF EM P I + L+ + K N+ D + L ++MQ G T+++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
LIN C+ +L A ++ M G PN VT ++L++G C + +AV+L+D+M +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
PN VT+ +TLI GLF KA +AM
Sbjct: 182 YQPNTVTF-----------------------------------NTLIHGLFLHNKASEAM 206
Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
L +M+ KGC+P+ V Y +++GLC+ G D A +L +M Y++++ G
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 266
Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
+ A+ ++K+M N V YS LI LC G+ +A + + M+ R PDV
Sbjct: 267 CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDV 326
Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLL 567
+S++I G + EA KL++EM ++ P + TY+ L+N C + + +
Sbjct: 327 FTFSALIDAFVKEGKLVEAEKLYDEM--VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 568 NSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR---------------LFK 612
M+ + C PD+VT N + K + ++G + E++ R LF+
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFC-KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQ 443
Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
+I + M+ + P T+ ++ LC+ +++ A+
Sbjct: 444 AGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAM 486
Score = 94.0 bits (232), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 110/240 (45%), Gaps = 23/240 (9%)
Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
K D+A + EM+ + + +S L+ + K + + + M +N YS
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
+LI+ C +L A V +M+ G +P++V SS+++G C++ + EA+ L ++M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV- 179
Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAP 596
QP+ T+N L++ L + S ++ L++ M+ +GC PDLVT + + L
Sbjct: 180 -TGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL------- 231
Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
KR T F ++ M Q L P + ++ LC+ K + A+N
Sbjct: 232 --------------CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALN 277
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 262 bits (670), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 266/520 (51%), Gaps = 50/520 (9%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+++AI LF MV ++ FN +L+ I + + + + + + I N
Sbjct: 66 LDDAIGLFGGMVKSRPLP-SIFEFNKLLSAIAKMKKFDLVISLGEKM---QRLGISHNLY 121
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T+N++I CR + A+ L +M EP I T +L++G C R+ +AV L+D+M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
G P +TF LI+GL + + A LVD M +GC PN VTY +++GLC +G++
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241
Query: 314 DKAVSLLDRMVASK-----------------------------------CMPNEVTYGTI 338
D A +LL++M A+K PN +TY ++
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301
Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
I+ L R D +R+L M ERK + N ++ LI KEGK +A KL+ +M+++
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361
Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
P+ YS+LI+G C + DEA+ + MI+ C N TY++L+ GF ++ + + VE
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
++++M++ V N V Y+ LIHG + A+MV+ QM+S G P+++ Y++++ GLC
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
G +E+A+ +F + K +P ++TYNI++ +CK + DL S+ +G PD
Sbjct: 482 KNGKLEKAMVVFEYLQ--RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 579 LVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
++ N ++ K L E A LF++ R G
Sbjct: 540 VIIYNTMISGFCRK---------GLKEEADALFRKMREDG 570
Score = 238 bits (606), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/486 (30%), Positives = 242/486 (49%), Gaps = 41/486 (8%)
Query: 164 IIQEGLYHRALE----FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
I++ GL+ L+ + +V ++ LP+ FN ++ + ++ D I L +M
Sbjct: 56 ILRNGLHSMKLDDAIGLFGGMVKSRP---LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
++YTY L++ C+ +++ A+ LL +M G P+ VT + L+NG C +
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
A LVD M G P+ +T+ TLIHGL L +AV+L+DRMV C PN VTYG ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
NGL K G +L ME K N IYST+I L K +DA+ L+ +M KG +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
PN + YS+LI LC + +A +L +MI N T+++L+ F + GK +A ++
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
+ +M K + + YS LI+G C +L EA+ ++ M+S+ C P+VV Y+++I+G C
Sbjct: 353 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK 412
Query: 520 AGSVEEALKLFNEM---------------------------------LCLEPKSQPDVFT 546
A ++E ++LF EM + P++ T
Sbjct: 413 AKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMT 472
Query: 547 YNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
YN LL+ LCK + ++ + + +P + T NI + + K +DG D L
Sbjct: 473 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC-KAGKVEDGWDLFCSL 531
Query: 607 AIRLFK 612
+++ K
Sbjct: 532 SLKGVK 537
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/429 (25%), Positives = 203/429 (47%), Gaps = 18/429 (4%)
Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
+LD+A+ L M P+ FN L++ + K + L + M G N TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
LI+ C + + A++LL +M+ P+ VT +++NG R D ++ M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
+ + ++TLI GLF KA +A+ L +M+++GC+PN V Y +++GLC+ G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
+L +M AN YS+++ + A+ ++ +M N + YS LI
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
LC + +A + + M+ R P+VV ++++I G + EA KL++EM ++
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM--IKRSID 362
Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
PD+FTY+ L+N C + + + M+ + C P++VT N + K + +G +
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC-KAKRIDEGVE 421
Query: 602 FLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
E++ R F+ + + + M+ + P T+ ++ LC
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481
Query: 647 RPKRIQAAI 655
+ +++ A+
Sbjct: 482 KNGKLEKAM 490
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/267 (32%), Positives = 142/267 (53%), Gaps = 4/267 (1%)
Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
+A RL M+ E V +FN++++ ++EG A + Y+ ++ +I P+ T+
Sbjct: 313 DASRLLSDMI-ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR---SIDPDIFTY 368
Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
+ +I C +D A +F M ++C P++ TY TL++G CK R+DE V L EM
Sbjct: 369 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 428
Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
G VT+ LI+G + + A + M G PN +TYNTL+ GLC G L+K
Sbjct: 429 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 488
Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
A+ + + + SK P TY +I G+ K G+ DG + S+ + + IY+T+IS
Sbjct: 489 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMIS 548
Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNT 402
G ++G E+A L+++M E G P++
Sbjct: 549 GFCRKGLKEEADALFRKMREDGPLPDS 575
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 126/252 (50%), Gaps = 8/252 (3%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
TF +LI + G E + M KR + F + + + ++EA +F
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMI--KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
M+ + C V ++N+++N + +E + + ++ NT+T+ +I
Sbjct: 390 LMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFREM---SQRGLVGNTVTYTTLIHGF 445
Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
+ DNA +F++M P+I TY TL+DGLCK +L++A+++ + +Q PT
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
T+N++I G+CK G++ L ++ LKG P+ + YNT+I G C KG ++A +L +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 323 MVASKCMPNEVT 334
M +P+ T
Sbjct: 566 MREDGPLPDSGT 577
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 141/309 (45%), Gaps = 18/309 (5%)
Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
R F Y ++ K +DA+ L+ M++ P+ ++ L+ + ++ K D
Sbjct: 44 RAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL 103
Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
+ +M G + N +TY+ L+ F + A+ + M K + V S L++
Sbjct: 104 VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLN 163
Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
G C ++ +A + QM+ G +PD + ++++IHGL EA+ L + M ++
Sbjct: 164 GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM--VQRGC 221
Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
QP++ TY +++N LCK+ +I + +LLN M + ++V + + +L K D
Sbjct: 222 QPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLC-KYRHEDDAL 280
Query: 601 DFLNEL---AIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
+ E+ +R L +R S +++ M+++ ++P T+ ++
Sbjct: 281 NLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAF 340
Query: 646 CRPKRIQAA 654
+ ++ A
Sbjct: 341 VKEGKLVEA 349
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 23/223 (10%)
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
++ + Y +++ S K A+ ++ M K+ + + ++ L+ + + K
Sbjct: 47 SSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVIS 106
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
+ +M G ++ Y+ +I+ C + AL L +M+ L +P + T + LLN
Sbjct: 107 LGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKL--GYEPSIVTLSSLLNG 164
Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
C IS ++ L++ M++ G PD +T + L F
Sbjct: 165 YCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL---------------------FLH 203
Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
+ S +V+ M+Q+ P T+ VV LC+ I A N
Sbjct: 204 NKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 246
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 260 bits (664), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 142/429 (33%), Positives = 236/429 (55%), Gaps = 11/429 (2%)
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
P+ +T N ++ C + A+ L +M +PD T+ TL+ GL + N+ EAV L
Sbjct: 133 PSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVAL 192
Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
++ M V GC P VT+ +INGLCK GE A L++ M + V Y+T+I LC
Sbjct: 193 VERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK 252
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
++D A++L M P+ TY ++I+ L GR D +R+L M ERK + N
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
+++LI KEGK +A KL+ +M+++ PN V Y++LI+G C + DEA++I M+
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
+ C + TY++L+ GF ++ K +E+++DM++ V N V Y+ LIHG +
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
A+MV+ QM+S G P+++ Y++++ GLC G +E+A+ +F + + K +PD++TYNI
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL--QKSKMEPDIYTYNI 490
Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
+ +CK + DL S+ +G PD++ N ++ +K L E A
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKK---------GLKEEAYT 541
Query: 610 LFKRQRTSG 618
LF + + G
Sbjct: 542 LFIKMKEDG 550
Score = 242 bits (617), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 159/529 (30%), Positives = 260/529 (49%), Gaps = 79/529 (14%)
Query: 132 HL-VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP 190
HL ++EA+ LF MV V+ F+ +L+ I + + + F + M IL
Sbjct: 43 HLKLDEAVDLFGEMVKSRPFPSIVE-FSKLLSAIAKMKKFDLVISF------GEKMEILG 95
Query: 191 ---NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAV 247
N T+N++I +CR + A+ + +M P I T +L++G C NR+ EAV
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 248 LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL 307
L+D+M G P VTF L++GL ++ + A LV+ M +KGC P+ VTY +I+GL
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 308 CLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL---------------------- 345
C +G D A++LL++M K + V Y T+I+ L K
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 346 -------------GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
GR D +R+L M ERK + N +++LI KEGK +A KL+ +
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335
Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
M+++ PN V Y++LI+G C + DEA++I M++ C + TY++L+ GF ++ K
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395
Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
+E+++DM++ V N V Y+ LIHG + A+MV+ QM+S G P+++ Y++
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455
Query: 513 MIHGLCNAGSVEEALKLF------------------NEMLCLEPKSQ------------- 541
++ GLC G +E+A+ +F +E +C K +
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 542 --PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
PDV YN +++ CK+ + L M + G PD T N + A
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 145/490 (29%), Positives = 248/490 (50%), Gaps = 42/490 (8%)
Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
S N++L++ + E A++ + +V ++ P+ + F+ ++ + ++ D I
Sbjct: 37 SRNALLHLKLDE-----AVDLFGEMVKSRP---FPSIVEFSKLLSAIAKMKKFDLVISFG 88
Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
+M + ++YTY +++ LC+ ++L A+ +L +M G P+ VT N L+NG C
Sbjct: 89 EKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHG 148
Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
+ A LVD M G P+ VT+ TL+HGL +AV+L++RMV C P+ VTY
Sbjct: 149 NRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
G +INGL K G +L ME+ K + IYST+I L K +DA+ L+ +M
Sbjct: 209 GAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDN 268
Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
KG +P+ YS+LI LC G+ +A +L +M+ N T++SL+ F + GK +
Sbjct: 269 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIE 328
Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
A +++ +M + + N V Y+ LI+G C +L EA+ ++T M+S+ C PDVV Y+++I+
Sbjct: 329 AEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 516 GLCNAGSVEEALKLFNEM---------------------------------LCLEPKSQP 542
G C A V + ++LF +M + P
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP 448
Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
++ TYN LL+ LCK + ++ + + +PD+ T NI + K +DG D
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC-KAGKVEDGWDL 507
Query: 603 LNELAIRLFK 612
L+++ K
Sbjct: 508 FCSLSLKGVK 517
Score = 222 bits (566), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 229/442 (51%), Gaps = 8/442 (1%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+ EA+ L MV+ + TV +F ++++ + Q A+ +V P+ +
Sbjct: 151 ISEAVALVDQMVEMGYQPDTV-TFTTLVHGLFQHNKASEAVALVERMVVK---GCQPDLV 206
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T+ VI +C+ G D A+ L +M E D+ Y T++D LCK +D+A+ L EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
G P T++ LI+ LC G A++L+ +M + PN VT+N+LI +G L
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
+A L D M+ PN VTY ++ING R + ++ M + + Y+TL
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
I+G K K D M+L++ M +G NTV Y+ LI G + D A+ + +M+++G
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
N TY++L+ G ++GK KA+ +++ + K+ + Y+++ G+C+ GK+ +
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
++ + +G KPDV+AY++MI G C G EEA LF +M E PD TYN L+ A
Sbjct: 507 LFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMK--EDGPLPDSGTYNTLIRA 564
Query: 554 LCKQSNISHSIDLLNSMMDRGC 575
+ + + S +L+ M R C
Sbjct: 565 HLRDGDKAASAELIKEM--RSC 584
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/419 (31%), Positives = 216/419 (51%), Gaps = 6/419 (1%)
Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
EA+ L MV + C+ + ++ +V+N + + G AL N + K I + + +
Sbjct: 188 EAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK---IEADVVIY 243
Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
+ VI ++C+ VD+A+ LF EM + PD++TY +L+ LC R +A LL +M
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
P VTFN LI+ K G+L A KL D M + PN VTYN+LI+G C+ LD+
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
A + MV+ C+P+ VTY T+ING K + VDG + M R N Y+TLI
Sbjct: 364 AQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIH 423
Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
G F+ ++A ++KQM+ G PN + Y+ L+DGLC+ GK ++A + + +
Sbjct: 424 GFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
+ +TY+ + +G ++GK +++ ++ + + Y+ +I G C+ G EA ++
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNAL 554
+M G PD Y+++I G + +L EM + D TY ++ + L
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSC--RFAGDASTYGLVTDML 600
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 23/202 (11%)
Query: 455 KAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMI 514
+AV+++ +M K+ + V +S L+ + + K +M G ++ Y+ MI
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
+ LC + AL + +M+ L P + T N LLN C + IS ++ L++ M++ G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKL--GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
PD VT L LF+ + S +VE M+ K P
Sbjct: 166 YQPDTVT---------------------FTTLVHGLFQHNKASEAVALVERMVVKGCQPD 204
Query: 635 TSTWERVVQELCRPKRIQAAIN 656
T+ V+ LC+ A+N
Sbjct: 205 LVTYGAVINGLCKRGEPDLALN 226
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 259 bits (662), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 234/403 (58%), Gaps = 2/403 (0%)
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
PNT+TF+ +I +C G V A++L M +PD+ T TL++GLC + EA+LL
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215
Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
+D+M GC P VT+ ++N +CK+G+ A +L+ M + + V Y+ +I GLC
Sbjct: 216 IDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
G+LD A +L + M N +TY +I G GR DGA++L M +RK + N
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVT 335
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
+S LI KEGK +A +L K+M+ +G P+T+ Y++LIDG C+ D+A +++ M+
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
+ GC N T++ L+ G+ ++ + +E+++ M+ V + V Y+ LI G CE GKL
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
A+ ++ +M+SR P++V Y ++ GLC+ G E+AL++F ++ + K + D+ YNI
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI--EKSKMELDIGIYNI 513
Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
+++ +C S + + DL S+ +G P + T NI + L +K
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKK 556
Score = 234 bits (596), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 224/425 (52%), Gaps = 5/425 (1%)
Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
A++ + ++ H LP + F+ + + + D + L ++M ++ ++YT
Sbjct: 72 AIDLFRDMI---HSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
+++ C+ +L A + ++ G P +TF+ LINGLC G + A +LVD M G
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
P+ +T NTL++GLCL G +A+ L+D+MV C PN VTYG ++N + K G+
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
+L MEER ++ YS +I GL K G ++A L+ +M KG N + Y+ LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
C G+ D+ ++L +MI N T+S L+ F + GK +A E+ K+M +
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDT 368
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
+ Y+ LI G C++ L +A + M+S+GC P++ ++ +I+G C A +++ L+LF +
Sbjct: 369 ITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRK 428
Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
M D TYN L+ C+ ++ + +L M+ R P++VT I L L +
Sbjct: 429 MSL--RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486
Query: 593 LEAPQ 597
E+ +
Sbjct: 487 GESEK 491
Score = 225 bits (574), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 236/458 (51%), Gaps = 6/458 (1%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
V EA+ L MV+ H K + + N+++N + G A+ + +V PN +
Sbjct: 174 VSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMV---EYGCQPNAV 229
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T+ V+ +C+ G A++L R+M RN + D Y ++DGLCK LD A L +EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 289
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
++ G +T+N+LI G C G AKL+ +M + PN VT++ LI +G L
Sbjct: 290 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 349
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
+A L M+ P+ +TY ++I+G K +++ M + N ++ L
Sbjct: 350 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 409
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
I+G K + +D ++L+++M +G +TV Y+ LI G C +GK + A+E+ EM++
Sbjct: 410 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
N TY L+ G ++G+ KA+EI++ + K+ + Y+++IHG+C K+ +A
Sbjct: 470 PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 529
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
++ + +G KP V Y+ MI GLC G + EA LF +M E PD +TYNIL+ A
Sbjct: 530 LFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM--EEDGHAPDGWTYNILIRA 587
Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
+ + S+ L+ + G D T + + L +
Sbjct: 588 HLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSD 625
Score = 215 bits (548), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 213/418 (50%), Gaps = 18/418 (4%)
Query: 190 PNTLTF------------NLVIKTVCRLGLVD----NAIQLFREMPVRNCEPDIYTYCTL 233
PN L+F NL + R GLVD +AI LFR+M P + + L
Sbjct: 35 PNELSFCCERGFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRL 94
Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
+ K + D + L +M++ G T +++IN C+ +L A + + G
Sbjct: 95 FSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGY 154
Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
PN +T++TLI+GLCL+G + +A+ L+DRMV P+ +T T++NGL G+ +
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214
Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
++ M E N Y +++ + K G+ AM+L ++M E+ K + V YS +IDGLC
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
+ G D A + EM G N TY+ L+ GF +G+ ++ +DM K N V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334
Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
+SVLI ++GKLREA + +M+ RG PD + Y+S+I G C +++A ++ + M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394
Query: 534 LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
+ P++ T+NIL+N CK + I ++L M RG D VT N + E
Sbjct: 395 --VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 158/342 (46%), Gaps = 25/342 (7%)
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
D A+ L M+ S+ +P + + + + + K + + ME + N Y S +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
I+ + K A ++++ G +PNT+ +S LI+GLC G+ EA E++ M+ G
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
+ T ++L+ G SGK +A+ + M + C N V Y +++ +C+ G+ A
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
+ +M R K D V YS +I GLC GS++ A LFNEM E K ++ TYNIL+
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM---EMKGITTNIITYNILIG 306
Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
C LL M+ R +P++VT ++ + + F+ E +R +
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS-------------FVKEGKLREAE 353
Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
M+ + ++P T T+ ++ C+ + A
Sbjct: 354 ELHKE--------MIHRGIAPDTITYTSLIDGFCKENHLDKA 387
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 255/493 (51%), Gaps = 41/493 (8%)
Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
++A+ LF M+ TV FN + + I + Y L + + I + T
Sbjct: 70 DDAVDLFRDMIQSRPLP-TVIDFNRLFSAIAKTKQYELVLALCKQM---ESKGIAHSIYT 125
Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
+++I CR + A ++ EPD + TL++GLC E R+ EA+ L+D M
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY-------------- 300
G PT +T N L+NGLC NG++ A L+D M G PNEVTY
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 301 ---------------------NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
+ +I GLC G+LD A +L + M + +TY T+I
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
G GR DGA++L M +RK N +S LI KEGK +A +L K+MM++G
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
PNT+ Y++LIDG C+ + +EA +++ MI+ GC + T++ L+ G+ ++ + +E+
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
+++M+ + N V Y+ L+ G C+ GKL A+ ++ +M+SR +PD+V+Y ++ GLC+
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
G +E+AL++F ++ + K + D+ Y I+++ +C S + + DL S+ +G D
Sbjct: 486 NGELEKALEIFGKI--EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 580 VTCNIFLTALKEK 592
NI ++ L K
Sbjct: 544 RAYNIMISELCRK 556
Score = 221 bits (563), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 226/456 (49%), Gaps = 41/456 (8%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
V +A+ L MV+ V ++ VLNV+ + G A+E + + NI + +
Sbjct: 209 VSDAVVLIDRMVETGFQPNEV-TYGPVLNVMCKSGQTALAMELLRKM---EERNIKLDAV 264
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
++++I +C+ G +DNA LF EM ++ + DI TY TL+ G C R D+ LL +M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
P VTF+VLI+ K G+L A +L+ M +G PN +TYN+LI G C + L
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
++A+ ++D M++ C P+ +T+ +ING K R DG + M R N Y+TL
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
+ G + GK E A KL+++M+ + +P+ V Y L+DGLC
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC-------------------- 484
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
++G+ KA+EI+ + K+ + Y ++IHG+C K+ +A
Sbjct: 485 ---------------DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
++ + +G K D AY+ MI LC S+ +A LF +M E PD TYNIL+ A
Sbjct: 530 LFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM--TEEGHAPDELTYNILIRA 587
Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
+ + + +L+ M G D+ T + + L
Sbjct: 588 HLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML 623
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 227/447 (50%), Gaps = 23/447 (5%)
Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
D+A+ LFR+M P + + L + K + + + L +M+ G + T +++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
IN C+ +L A + + G P+ V +NTL++GLCL+ + +A+ L+DRMV
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
P +T T++NGL G+ D ++ M E F NE Y +++ + K G+ AM+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
L ++M E+ K + V YS +IDGLC+ G D A + EM G A+ TY++L+ GF
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
+G+ ++ +DM K N V +SVLI ++GKLREA + +M+ RG P+ +
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369
Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
Y+S+I G C +EEA+++ + M + PD+ T+NIL+N CK + I ++L
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLM--ISKGCDPDIMTFNILINGYCKANRIDDGLELFR 427
Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
M RG + VT N + Q G E+A +LF+ M+
Sbjct: 428 EMSLRGVIANTVTYNTLVQGF------CQSGK---LEVAKKLFQE------------MVS 466
Query: 629 KFLSPQTSTWERVVQELCRPKRIQAAI 655
+ + P +++ ++ LC ++ A+
Sbjct: 467 RRVRPDIVSYKILLDGLCDNGELEKAL 493
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 256 bits (655), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 156/493 (31%), Positives = 256/493 (51%), Gaps = 41/493 (8%)
Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
++A+ LF M R + F+ + +V+ + Y L+ + + I N T
Sbjct: 54 DDAVDLFQEMTRSRPRPRLI-DFSRLFSVVARTKQYDLVLDLCKQM---ELKGIAHNLYT 109
Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
+++I CR + A ++ EPD T+ TL++GLC E R+ EA+ L+D M
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY-------------- 300
G PT +T N L+NGLC NG++ A L+D M G PNEVTY
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 301 ---------------------NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
+ +I GLC G+LD A +L + M + + Y T+I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
G GR DGA++L M +RK + +S LI KEGK +A +L K+M+++G
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
P+TV Y++LIDG C+ + D+A +L M++ GC N T++ L+ G+ ++ +E+
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
++ M+ V + V Y+ LI G CE GKL A+ ++ +M+SR +PD+V+Y ++ GLC+
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
G E+AL++F ++ + K + D+ YNI+++ +C S + + DL S+ +G PD+
Sbjct: 470 NGEPEKALEIFEKI--EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 580 VTCNIFLTALKEK 592
T NI + L +K
Sbjct: 528 KTYNIMIGGLCKK 540
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/458 (29%), Positives = 234/458 (51%), Gaps = 6/458 (1%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
V EA+ L MV+ H K T+ + N+++N + G A+ + +V PN +
Sbjct: 158 VSEALELVDRMVEMGH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ---PNEV 213
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T+ V+K +C+ G A++L R+M R + D Y ++DGLCK+ LD A L +EM
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
++ G + + LI G C G AKL+ +M + P+ V ++ LI +G L
Sbjct: 274 EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKL 333
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
+A L M+ P+ VTY ++I+G K + +L M + N ++ L
Sbjct: 334 REAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNIL 393
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
I+G K +D ++L+++M +G +TV Y+ LI G C +GK + A+E+ EM++
Sbjct: 394 INGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
+ +Y L+ G ++G+ KA+EI++ + K+ + Y+++IHG+C K+ +A
Sbjct: 454 RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWD 513
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
++ + +G KPDV Y+ MI GLC GS+ EA LF +M E P+ TYNIL+ A
Sbjct: 514 LFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKM--EEDGHSPNGCTYNILIRA 571
Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
+ + + S L+ + G D T + + L +
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 152/342 (44%), Gaps = 25/342 (7%)
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
D AV L M S+ P + + + + + + + + ME + N Y S +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
I+ + K A ++++ G +P+TV +S LI+GLC G+ EA E++ M+ G
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
T ++L+ G +GK AV + M + NEV Y ++ +C+ G+ A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLN 552
+ +M R K D V YS +I GLC GS++ A LFNEM E K + D+ Y L+
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM---EIKGFKADIIIYTTLIR 290
Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
C LL M+ R PD+V + + F+ E +R +
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC-------------FVKEGKLREAE 337
Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
++ + M+Q+ +SP T T+ ++ C+ ++ A
Sbjct: 338 --------ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKA 371
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 14/190 (7%)
Query: 404 VYSALIDGLCRVG------------KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
V+S++ DG +V K D+A ++ EM + +S L +
Sbjct: 27 VFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTK 86
Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
+ +++ K M +N S++I+ C KL A +++ G +PD V +S
Sbjct: 87 QYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFS 146
Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
++I+GLC G V EAL+L + M +E +P + T N L+N LC +S ++ L++ M+
Sbjct: 147 TLINGLCLEGRVSEALELVDRM--VEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMV 204
Query: 572 DRGCDPDLVT 581
+ G P+ VT
Sbjct: 205 ETGFQPNEVT 214
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 255 bits (651), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/496 (31%), Positives = 260/496 (52%), Gaps = 8/496 (1%)
Query: 101 SLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE--FHCKRTVKSFN 158
++++VL RM + S+ + K + +EA+ L H M D+ V S+
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200
Query: 159 SVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREM 218
+V+N +EG +A Y+ +++ ILP+ +T+N +I +C+ +D A+++ M
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDR---GILPDVVTYNSIIAALCKAQAMDKAMEVLNTM 257
Query: 219 PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGEL 278
PD TY +++ G C + EA+ L +M+ DG P VT+++L++ LCKNG
Sbjct: 258 VKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRC 317
Query: 279 GRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTI 338
A K+ D+M +G P TY TL+ G KG L + LLD MV + P+ + +
Sbjct: 318 MEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSIL 377
Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
I K G+ V M ++ + N Y +I L K G+ EDAM ++QM+++G
Sbjct: 378 ICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGL 437
Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
P +VY++LI GLC K + AEE++ EM++ G N ++S++ + G+ ++ +
Sbjct: 438 SPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEK 497
Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
+++ M + N + Y+ LI+G C GK+ EA + + M+S G KP+ V YS++I+G C
Sbjct: 498 LFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYC 557
Query: 519 NAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
+E+AL LF EM PD+ TYNI+L L + + + +L + + G +
Sbjct: 558 KISRMEDALVLFKEM--ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIE 615
Query: 579 LVTCNIFLTAL-KEKL 593
L T NI L L K KL
Sbjct: 616 LSTYNIILHGLCKNKL 631
Score = 238 bits (608), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 149/547 (27%), Positives = 264/547 (48%), Gaps = 27/547 (4%)
Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
+F + K +A+ + + E C V S+N +L + E ALE +
Sbjct: 124 AFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHM 183
Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
+ + + P+ +++ VI + G D A + EM R PD+ TY +++ LCK
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243
Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
+D+A+ +L+ M +G P +T+N +++G C +G+ A + M G P+ VT
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303
Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
Y+ L+ LC G +A + D M P TYGT++ G G V+ +L M
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363
Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
H + Y++S LI K+GK + AM ++ +M ++G PN V Y A+I LC+ G+ +
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423
Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
+A +MI+ G + Y+SL+ G K +A E+ +M N + ++ +I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483
Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
C++G++ E+ ++ M+ G KP+V+ Y+++I+G C AG ++EA+KL + M+ + K
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543
Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
P+ TY+ L+N CK S + ++ L M G PD++T NI L
Sbjct: 544 --PNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQG----------- 590
Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI---- 655
LF+ +RT+ ++ + + + ST+ ++ LC+ K A+
Sbjct: 591 ----------LFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQ 640
Query: 656 NKCWSNL 662
N C +L
Sbjct: 641 NLCLMDL 647
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 242/507 (47%), Gaps = 10/507 (1%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
T+ S++ Y +SG K L +MR + ++ + K EA ++F +M
Sbjct: 268 TYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSM 327
Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN-ILPNTLTFNLVIKTVC 203
KR +K + ++Q AL + +++ N I P+ F+++I
Sbjct: 328 T-----KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYA 382
Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
+ G VD A+ +F +M + P+ TY ++ LCK R+++A+L ++M +G P +
Sbjct: 383 KQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNI 442
Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
+N LI+GLC + RA +L+ M +G N + +N++I C +G + ++ L + M
Sbjct: 443 VYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELM 502
Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
V PN +TY T+ING G+ + ++L M N YSTLI+G K +
Sbjct: 503 VRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRM 562
Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
EDA+ L+K+M G P+ + Y+ ++ GL + + A+E+ + +G TY+ +
Sbjct: 563 EDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNII 622
Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
+ G ++ A+++++++ + ++++I L + G+ EA+ ++ S G
Sbjct: 623 LHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGL 682
Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISH 562
P+ Y M + G +EE +LF L +E D N ++ L ++ I+
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLF---LSMEDNGCTVDSGMLNFIVRELLQRGEITR 739
Query: 563 SIDLLNSMMDRGCDPDLVTCNIFLTAL 589
+ L+ + ++ + T ++F+ L
Sbjct: 740 AGTYLSMIDEKHFSLEASTASLFIDLL 766
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 254 bits (648), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 254/501 (50%), Gaps = 24/501 (4%)
Query: 136 EAIRLFHTMV------DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
E++ L TMV D C + +K F ++ N I + LE +
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN-IPKAVRVMEILEKFGQ---------- 155
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
P+ +N +I C++ +D+A ++ M ++ PD TY ++ LC +LD A+ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
L+++ D C PT +T+ +LI G + A KL+D M +G P+ TYNT+I G+C
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
+G +D+A ++ + C P+ ++Y ++ L+ G+ +G +++ M K N
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
YS LI+ L ++GK E+AM L K M EKG P+ Y LI CR G+ D A E L MI
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDG-KL 488
++GC + Y++++ ++GK +A+EI+ + + C N Y+ + L G K+
Sbjct: 396 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 455
Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
R M+ +M+S G PD + Y+SMI LC G V+EA +L +M E P V TYN
Sbjct: 456 RALHMIL-EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE--FHPSVVTYN 512
Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL---KEKLEAPQDGTDFLNE 605
I+L CK I +I++L SM+ GC P+ T + + + + EA + D +
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRI 572
Query: 606 LAIRLFKRQRTSGGFKIVEVM 626
AI + +R F ++ V+
Sbjct: 573 DAISEYSFKRLHRTFPLLNVL 593
Score = 184 bits (466), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 194/396 (48%), Gaps = 17/396 (4%)
Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
C++G + L++ M KG P+ + LI G N+ KAV +++ ++ P+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFGQPDV 158
Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
Y +ING K+ R D RVL M + F + Y+ +I L GK + A+K+ Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
++ C+P + Y+ LI+ G DEA +++ EM++ G + FTY+++++G + G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
+A E+ +++ C + + Y++L+ L GK E + T+M S C P+VV YS
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
+I LC G +EEA+ L L E PD ++Y+ L+ A C++ + +I+ L +M+
Sbjct: 339 LITTLCRDGKIEEAMNLLK--LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMIS 396
Query: 573 RGCDPDLVTCNIFLTALKEKLEAPQDGTDF--LNELAIR--------LFKRQRTSG---- 618
GC PD+V N L L + +A Q F L E+ +F +SG
Sbjct: 397 DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIR 456
Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
++ M+ + P T+ ++ LCR + A
Sbjct: 457 ALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 179/336 (53%), Gaps = 4/336 (1%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
V+EA++L M+ K + ++N+++ + +EG+ RA E + N + P+ +
Sbjct: 244 VDEALKLMDEMLSR-GLKPDMFTYNTIIRGMCKEGMVDRAFEM---VRNLELKGCEPDVI 299
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
++N++++ + G + +L +M C+P++ TY L+ LC++ +++EA+ LL M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
+ G P +++ LI C+ G L A + ++ M GCLP+ V YNT++ LC G
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
D+A+ + ++ C PN +Y T+ + L G + +++ M +E Y+++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
IS L +EG ++A +L M P+ V Y+ ++ G C+ + ++A +L M+ NGC
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
N TY+ L++G +G +A+E+ D+ + + +
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAI 575
Score = 129 bits (324), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 147/291 (50%), Gaps = 17/291 (5%)
Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
+ G +++ L + M+ KG P+ ++ + LI G + +A ++ E++ + F
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVF 159
Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
Y++L+ GF + + A + M + + V Y+++I LC GKL A V Q+
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
LS C+P V+ Y+ +I G V+EALKL +EML K PD+FTYN ++ +CK+
Sbjct: 220 LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLK--PDMFTYNTIIRGMCKEG 277
Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK---LEAPQDGTDFLNE---------- 605
+ + +++ ++ +GC+PD+++ NI L AL + E + T +E
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 606 -LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
L L + + ++++M +K L+P +++ ++ CR R+ AI
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAI 388
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 158/538 (29%), Positives = 277/538 (51%), Gaps = 16/538 (2%)
Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
++ + Y + ++ A ++F+ M + C+R ++ +++ + A++ +
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLK-GCRRNEVAYTHLIHGLCVARRIDEAMDLF-- 311
Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
V K P T+ ++IK++C A+ L +EM +P+I+TY L+D LC
Sbjct: 312 -VKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCS 370
Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
+ + ++A LL +M G P +T+N LING CK G + A +V+ M + PN T
Sbjct: 371 QCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRT 430
Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
YN LI G C K N+ KA+ +L++M+ K +P+ VTY ++I+G + G R+L M
Sbjct: 431 YNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMN 489
Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
+R +++ Y+++I L K + E+A L+ + +KG PN V+Y+ALIDG C+ GK D
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
EA +L +M++ C N+ T+++L+ G GK +A + + M K ++LI
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
H L +DG A + QMLS G KPD Y++ I C G + +A + +M E
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR--ENG 667
Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLE---AP 596
PD+FTY+ L+ + + D+L M D GC+P T FL+ +K LE
Sbjct: 668 VSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHT---FLSLIKHLLEMKYGK 724
Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
Q G++ EL + +++E M++ ++P ++E+++ +C ++ A
Sbjct: 725 QKGSE--PELCA-MSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Score = 251 bits (642), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 154/484 (31%), Positives = 251/484 (51%), Gaps = 12/484 (2%)
Query: 108 RMRREKRVVLEKSFIF-----IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLN 162
+M +++R L+ I + + + LV+E +++ M+++ C + ++N ++N
Sbjct: 168 KMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCP-NIYTYNKMVN 226
Query: 163 VIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRN 222
+ G A ++ + IV A + P+ T+ +I C+ +D+A ++F EMP++
Sbjct: 227 GYCKLGNVEEANQYVSKIVEA---GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 223 CEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAA 282
C + Y L+ GLC R+DEA+ L +M+ D CFPT T+ VLI LC + A
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
LV M G PN TY LI LC + +KA LL +M+ MPN +TY +ING
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
K G D V+ ME RK N Y+ LI G K AM + +M+E+ P+
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDV 462
Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
V Y++LIDG CR G D A +L M + G + +TY+S++ +S + +A +++
Sbjct: 463 VTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
+ + N V Y+ LI G C+ GK+ EA ++ +MLS+ C P+ + ++++IHGLC G
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGK 582
Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
++EA L +M+ + QP V T IL++ L K + H+ M+ G PD T
Sbjct: 583 LKEATLLEEKMVKI--GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640
Query: 583 NIFL 586
F+
Sbjct: 641 TTFI 644
Score = 236 bits (602), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 235/477 (49%), Gaps = 23/477 (4%)
Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
+N ++ ++ R GLVD Q++ EM P+IYTY +++G CK ++EA + ++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
G P T+ LI G C+ +L A K+ + M LKGC NEV Y LIHGLC+ +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
+A+ L +M +C P TY +I L R + ++ MEE N + Y+ LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
L + K E A +L QM+EKG PN + Y+ALI+G C+ G ++A +++ M + +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
N TY+ L+KG+ +S HKA+ + M + + + V Y+ LI G C G A +
Sbjct: 426 PNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNA 553
+ M RG PD Y+SMI LC + VEEA LF+ LE K P+V Y L++
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS---LEQKGVNPNVVMYTALIDG 541
Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL------------TALKEKLE----APQ 597
CK + + +L M+ + C P+ +T N + T L+EK+ P
Sbjct: 542 YCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPT 601
Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
TD + L RL K + + ML P T+ +Q CR R+ A
Sbjct: 602 VSTDTI--LIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/471 (28%), Positives = 233/471 (49%), Gaps = 23/471 (4%)
Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
V ++N+++N + G+ A++ + + K + PNT T+N +IK C+ V A+
Sbjct: 393 VITYNALINGYCKRGMIEDAVDVVELMESRK---LSPNTRTYNELIKGYCKSN-VHKAMG 448
Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
+ +M R PD+ TY +L+DG C+ D A LL M G P T+ +I+ LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
K+ + A L D++ KG PN V Y LI G C G +D+A +L++M++ C+PN +
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL 568
Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
T+ +I+GL G+ + + M + + LI L K+G + A ++QM
Sbjct: 569 TFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQM 628
Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
+ G KP+ Y+ I CR G+ +AE+++ +M NG + + FTYSSL+KG+ + G+
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQT 688
Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE--DGKLREAR----------------MVW 495
+ A ++ K M C ++ + LI L E GK + + +
Sbjct: 689 NFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELL 748
Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
+M+ P+ +Y +I G+C G++ A K+F+ M E S P +N LL+ C
Sbjct: 749 EKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS-PSELVFNALLSCCC 807
Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
K + + +++ M+ G P L +C + + L +K E + + F N L
Sbjct: 808 KLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLL 858
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 142/535 (26%), Positives = 248/535 (46%), Gaps = 33/535 (6%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
T+ +LI Y G + V+ M K +++ + K Y K++ V +A+ + + M
Sbjct: 395 TYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKM 453
Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
+ E V ++NS+++ + G + A + ++N + ++P+ T+ +I ++C+
Sbjct: 454 L-ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS-LMNDR--GLVPDQWTYTSMIDSLCK 509
Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
V+ A LF + + P++ Y L+DG CK ++DEA L+L++M C P +T
Sbjct: 510 SKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT 569
Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
FN LI+GLC +G+L A L + M G P T LIH L G+ D A S +M+
Sbjct: 570 FNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
+S P+ TY T I + GR +D ++ M E + + YS+LI G G+
Sbjct: 630 SSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTN 689
Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLC--RVGKPDEAE----------------EILF 426
A + K+M + GC+P+ + +LI L + GK +E E+L
Sbjct: 690 FAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLE 749
Query: 427 EMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVY-NEVCYSVLIHGLCED 485
+M+ + NA +Y L+ G E G A +++ M +N + +E+ ++ L+ C+
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 486 GKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVF 545
K EA V M+ G P + + +I GL G E +F + L+ D
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL--LQCGYYEDEL 867
Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGT 600
+ I+++ + KQ + +L N M GC T ++ +E P D T
Sbjct: 868 AWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLL-------IEGPPDST 915
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 243/465 (52%), Gaps = 11/465 (2%)
Query: 126 KAYGKAHLVEEAIRLFH-TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
KA ++E+ L H + + E + N ++++ + + A++ + ++ ++
Sbjct: 11 KASNFTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVND-----AIDLFESMIQSR 65
Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
LP + FN + V R D + + M + E D+YT +++ C++ +L
Sbjct: 66 P---LPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLL 122
Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
A +L G P +TF+ L+NG C G + A LVD M P+ VT +TLI
Sbjct: 123 FAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLI 182
Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
+GLCLKG + +A+ L+DRMV P+EVTYG ++N L K G + + MEER
Sbjct: 183 NGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIK 242
Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
+ YS +I L K+G +DA+ L+ +M KG K + V YS+LI GLC GK D+ ++
Sbjct: 243 ASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKM 302
Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
L EMI + T+S+L+ F + GK +A E++ +M + + Y+ LI G C+
Sbjct: 303 LREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
+ L EA ++ M+S+GC+PD+V YS +I+ C A V++ ++LF E+ P+
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREI--SSKGLIPNT 420
Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
TYN L+ C+ ++ + +L M+ RG P +VT I L L
Sbjct: 421 ITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGL 465
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 267/536 (49%), Gaps = 48/536 (8%)
Query: 60 KSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRM---RREKRVV 116
K + F+ + KLG Y+ TF +L+ + G ++ RM ++ +V
Sbjct: 118 KKKLLFAFSVLGRAWKLG-YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLV 176
Query: 117 LEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
+ I G+ V EA+ L MV E+ + ++ VLN + + G AL+
Sbjct: 177 TVSTLINGLCLKGR---VSEALVLIDRMV-EYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
+ + + NI + + +++VI ++C+ G D+A+ LF EM ++ + D+ TY +L+ G
Sbjct: 233 FRKM---EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
LC + + D+ +L EM P VTF+ LI+ K G+L A +L + M +G P+
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
+TYN+LI G C + L +A + D MV+ C P+ VTY +IN K R
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRV-------- 401
Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
+D M+L++++ KG PNT+ Y+ L+ G C+ G
Sbjct: 402 ---------------------------DDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Query: 417 KPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYS 476
K + A+E+ EM++ G + TY L+ G ++G+ +KA+EI++ M K+ Y+
Sbjct: 435 KLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
++IHG+C K+ +A ++ + +G KPDVV Y+ MI GLC GS+ EA LF +M
Sbjct: 495 IIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK-- 552
Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
E PD FTYNIL+ A S + S++L+ M G D T + + L ++
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 10/204 (4%)
Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
+ + F GK + +E LF MV +V ++ +L+ + G ++ALE +
Sbjct: 425 TLVLGFCQSGKLNAAKE---LFQEMVSR-GVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
+ ++ + +N++I +C VD+A LF + + +PD+ TY ++ GLCK
Sbjct: 481 MQKSR---MTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK 537
Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
+ L EA +L +M+ DGC P T+N+LI L + +L++ M + G + T
Sbjct: 538 KGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSST 597
Query: 300 YNTLIHGLCLKGNLDKAVSLLDRM 323
+I L + LDK S LD +
Sbjct: 598 IKMVIDMLSDR-RLDK--SFLDML 618
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/468 (33%), Positives = 252/468 (53%), Gaps = 12/468 (2%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+++AI LF MV V+ F+ +L+ I + + + + N + I N
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVE-FSKLLSAIAKMNKFDLVISLGEQMQN---LGISHNLY 111
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T+++ I CR + A+ + +M P I T +L++G C NR+ EAV L+D+M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
G P VTF L++GL ++ + A LV+ M +KGC P+ VTY +I+GLC +G
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
D A++LL++M K + V Y TII+GL K D + ME + + + Y+ L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG- 432
IS L G+ DA +L M+EK P+ V ++ALID + GK EAE++ EM+ +
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351
Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
C + Y++L+KGF + + + +E++++M++ V N V Y+ LIHG + A+
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411
Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLN 552
MV+ QM+S G PD++ Y+ ++ GLCN G+VE AL +F M + K D+ TY ++
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK--LDIVTYTTMIE 469
Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT-----ALKEKLEA 595
ALCK + DL S+ +G P++VT ++ LKE+ +A
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 517
Score = 207 bits (527), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 222/440 (50%), Gaps = 6/440 (1%)
Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
++ + NS+LN A+ + +V M P+T+TF ++ + + A+
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMV---EMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
L M V+ C+PD+ TY +++GLCK D A+ LL++M+ V +N +I+GL
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260
Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
CK + A L + M KG P+ TYN LI LC G A LL M+ P+
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDL 320
Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI-YSTLISGLFKEGKAEDAMKLWK 391
V + +I+ VK G+ V+ ++ M + K + + Y+TLI G K + E+ M++++
Sbjct: 321 VFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
+M ++G NTV Y+ LI G + D A+ + +M+++G + TY+ L+ G +G
Sbjct: 381 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
A+ +++ M K + + V Y+ +I LC+ GK+ + ++ + +G KP+VV Y+
Sbjct: 441 NVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 500
Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
+M+ G C G EEA LF EM E P+ TYN L+ A + + + S +L+ M
Sbjct: 501 TMMSGFCRKGLKEEADALFVEM--KEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMR 558
Query: 572 DRGCDPDLVTCNIFLTALKE 591
G D T + L +
Sbjct: 559 SCGFAGDASTFGLVTNMLHD 578
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 116/398 (29%), Positives = 188/398 (47%), Gaps = 38/398 (9%)
Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF---------------YNHI 180
EA+ L MV + C+ + ++ +V+N + + G AL YN I
Sbjct: 198 EAVALVERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 181 VNA----KHMN-------------ILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNC 223
++ KHM+ I P+ T+N +I +C G +A +L +M +N
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNI 316
Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAA 282
PD+ + L+D KE +L EA L DEM + CFP V +N LI G CK +
Sbjct: 317 NPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGM 376
Query: 283 KLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGL 342
++ M +G + N VTY TLIHG + D A + +MV+ P+ +TY +++GL
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 343 VKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNT 402
G V M++R ++ Y+T+I L K GK ED L+ + KG KPN
Sbjct: 437 CNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNV 496
Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKD 462
V Y+ ++ G CR G +EA+ + EM +G N+ TY++L++ G + E+ K+
Sbjct: 497 VTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKE 556
Query: 463 MAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
M + + L+ + DG+L ++ + MLS
Sbjct: 557 MRSCGFAGDASTFG-LVTNMLHDGRLDKS---FLDMLS 590
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 204/453 (45%), Gaps = 79/453 (17%)
Query: 238 CKEN---------RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
C+EN +LD+A+ L +M FP+ V F+ L++ + K + L + M
Sbjct: 42 CRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM 101
Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
G N TY+ I+ C + L A+++L +M+ P+ VT +++NG R
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 349 VDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
+ ++ M E + + ++TL+ GLF+ KA +A+ L ++M+ KGC+P+ V Y A+
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 409 IDGLCRVGKPD--------------EAEEILFEMI---------------------NNGC 433
I+GLC+ G+PD EA+ +++ I G
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 281
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
+ FTY+ L+ G+ A + DM + N + V ++ LI ++GKL EA
Sbjct: 282 KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEK 341
Query: 494 VWTQML-SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------- 533
++ +M+ S+ C PDVVAY+++I G C VEE +++F EM
Sbjct: 342 LYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGF 401
Query: 534 --------------LCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
+ PD+ TYNILL+ LC N+ ++ + M R D+
Sbjct: 402 FQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDI 461
Query: 580 VTCNIFLTALKEKLEAPQDGTDFLNELAIRLFK 612
VT + AL K +DG D L+++ K
Sbjct: 462 VTYTTMIEALC-KAGKVEDGWDLFCSLSLKGVK 493
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 23/201 (11%)
Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
A+ ++ DM K+ + V +S L+ + + K + QM + G ++ YS I+
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
C + AL + +M+ L P + T N LLN C + IS ++ L++ M++ G
Sbjct: 119 YFCRRSQLSLALAILGKMMKL--GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 576 DPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQT 635
PD VT L LF+ + S +VE M+ K P
Sbjct: 177 QPDTVT---------------------FTTLVHGLFQHNKASEAVALVERMVVKGCQPDL 215
Query: 636 STWERVVQELCRPKRIQAAIN 656
T+ V+ LC+ A+N
Sbjct: 216 VTYGAVINGLCKRGEPDLALN 236
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/521 (29%), Positives = 253/521 (48%), Gaps = 65/521 (12%)
Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
F + K+Y + L+++A+ + H + V S+N+VL+ I+ R + F ++
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVH-LAQAHGFMPGVLSYNAVLDATIRS---KRNISFAENV 192
Query: 181 VNAK-HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
+ PN T+N++I+ C G +D A+ LF +M + C P++ TY TL+DG CK
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252
Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG----------ELGRAAKLVDN-- 287
++D+ LL M + G P +++NV+INGLC+ G E+ R +D
Sbjct: 253 LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT 312
Query: 288 -----------------------MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
M G P+ +TY +LIH +C GN+++A+ LD+M
Sbjct: 313 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 372
Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
PNE TY T+++G + G + RVL M + F + Y+ LI+G GK E
Sbjct: 373 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 432
Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
DA+ + + M EKG P+ V YS ++ G CR DEA + EM+ G + TYSSL+
Sbjct: 433 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 492
Query: 445 KGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
+GF E + +A +++++M + +E Y+ LI+ C +G L +A + +M+ +G
Sbjct: 493 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552
Query: 505 PDVVAYSSMIHGLCNAGSVEEA----LKLFNEMLCLEPKSQPDVFTYNI----------- 549
PDVV YS +I+GL EA LKLF E +S P TY+
Sbjct: 553 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYE------ESVPSDVTYHTLIENCSNIEFK 606
Query: 550 ----LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
L+ C + ++ + + SM+ + PD NI +
Sbjct: 607 SVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMI 647
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 138/432 (31%), Positives = 220/432 (50%), Gaps = 34/432 (7%)
Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR-LDEAVLLLDEM 253
F+LV+K+ RL L+D A+ + P + +Y ++D + R + A + EM
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
P T+N+LI G C G + A L D M KGCLPN VTYNTLI G C +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
D LL M PN ++Y +INGL + GR + + VL M R + ++E Y+TL
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
I G KEG A+ + +M+ G P+ + Y++LI +C+ G + A E L +M G
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
N TY++L+ GF + G ++A + ++M N + V Y+ LI+G C GK+ +A
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML------------------C 535
V M +G PDVV+YS+++ G C + V+EAL++ EM+ C
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 536 LEPKSQ---------------PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
+ +++ PD FTY L+NA C + ++ ++ L N M+++G PD+V
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 581 TCNIFLTALKEK 592
T ++ + L ++
Sbjct: 557 TYSVLINGLNKQ 568
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 200/399 (50%), Gaps = 54/399 (13%)
Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
++N+++ +EG +H+AL + ++ +H + P+ +T+ +I ++C+ G ++ A++
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEML--RH-GLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
+M VR P+ TY TL+DG ++ ++EA +L EM +G P+ VT+N LING C
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
G++ A ++++M KG P+ V+Y+T++ G C ++D+A+ + MV P+ +TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
++I G + R + + M +E+ Y+ LI+ EG E A++L +M+E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS-------------- 441
KG P+ V YS LI+GL + + EA+ +L ++ + TY
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 442 -SLMKGF------------FES--GKGHK---------------------AVEIWKDMAK 465
SL+KGF FES GK HK A ++K+M K
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCK 504
+ + + V L+ L ++GK+ E V +L R C+
Sbjct: 669 SGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL-RSCE 706
Score = 153 bits (386), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 166/350 (47%), Gaps = 36/350 (10%)
Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR-VLMSMEERKFHVNEYIYS 371
+DKA+S++ A MP ++Y +++ ++ R + A V M E + N + Y+
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
LI G G + A+ L+ +M KGC PN V Y+ LIDG C++ K D+ ++L M
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
G N +Y+ ++ G G+ + + +M + +EV Y+ LI G C++G +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM----LCLEPKSQPDVFTY 547
++ +ML G P V+ Y+S+IH +C AG++ A++ ++M LC P+ TY
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC------PNERTY 383
Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA--LKEKLEAPQDGTDFLNE 605
L++ ++ ++ + +L M D G P +VT N + + K+E
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME----------- 432
Query: 606 LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
++E M +K LSP ++ V+ CR + A+
Sbjct: 433 ------------DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEAL 470
Score = 139 bits (350), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 188/404 (46%), Gaps = 19/404 (4%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
T+ SLI +G+ L +MR E+++ + + + + EA R+ M
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
D V ++N+++N G A+ + + K + P+ ++++ V+ CR
Sbjct: 407 NDNGFSPSVV-TYNALINGHCVTGKMEDAIAV---LEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
VD A+++ REM + +PD TY +L+ G C++ R EA L +EM G P T
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
+ LIN C G+L +A +L + M KG LP+ VTY+ LI+GL + +A LL ++
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Query: 325 ASKCMPNEVTYGTII---------------NGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
+ +P++VTY T+I G G + +V SM + +
Sbjct: 583 YEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTA 642
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
Y+ +I G + G A L+K+M++ G +TV AL+ L + GK +E ++ ++
Sbjct: 643 YNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL 702
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
+ + A L++ G +++ +MAK+ + N +
Sbjct: 703 RSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGI 746
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 249 bits (636), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 133/403 (33%), Positives = 226/403 (56%), Gaps = 5/403 (1%)
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
P+ +T + ++ C + +A+ L +M +PD +T+ TL+ GL N+ EAV L
Sbjct: 151 PDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
+D+M GC P VT+ ++NGLCK G++ A L++ M N V +NT+I LC
Sbjct: 211 VDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCK 270
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
+++ AV L M PN VTY ++IN L GR D +R+L +M E+K + N
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVT 330
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
++ LI FKEGK +A KL ++M+++ P+T+ Y+ LI+G C + DEA+++ M+
Sbjct: 331 FNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
+ C N TY++L+ GF + + VE++++M++ V N V Y+ +I G + G
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
A+MV+ QM+S D++ YS ++HGLC+ G ++ AL +F + + + + ++F YN
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYL--QKSEMELNIFIYNT 508
Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
++ +CK + + DL S+ PD+VT N ++ L K
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSK 548
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 141/468 (30%), Positives = 236/468 (50%), Gaps = 9/468 (1%)
Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
+ Y + + +A+ L MV E K +F ++++ + L+++A E +
Sbjct: 159 LLNGYCHSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLF---LHNKASEAVALVDQM 214
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
P+ +T+ V+ +C+ G +D A+ L +M + ++ + T++D LCK +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHV 274
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
+ AV L EM+ G P VT+N LIN LC G A++L+ NM K PN VT+N L
Sbjct: 275 EVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNAL 334
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
I +G L +A L + M+ P+ +TY +ING R + ++ M +
Sbjct: 335 IDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDC 394
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
N Y+TLI+G K + ED ++L+++M ++G NTV Y+ +I G + G D A+
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
+ +M++N + TYS L+ G GK A+ I+K + K+ N Y+ +I G+C
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
+ GK+ EA W S KPDVV Y++MI GLC+ ++EA LF +M E + P+
Sbjct: 515 KAGKVGEA---WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKM--KEDGTLPN 569
Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
TYN L+ A + + + S +L+ M G D T ++ L +
Sbjct: 570 SGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD 617
Score = 219 bits (559), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/417 (29%), Positives = 221/417 (52%), Gaps = 5/417 (1%)
Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
A++ + +V ++ P+ + FN ++ V ++ + I L +M D+YTY
Sbjct: 67 AVDLFGDMVKSRP---FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
++ C+ ++L A+ +L +M G P VT + L+NG C + + A LVD M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
P+ T+ TLIHGL L +AV+L+D+MV C P+ VTYGT++NGL K G
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
+L ME + N I++T+I L K E A+ L+ +M KG +PN V Y++LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
C G+ +A +L M+ N T+++L+ FF+ GK +A ++ ++M + + +
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
+ Y++LI+G C +L EA+ ++ M+S+ C P++ Y+++I+G C VE+ ++LF E
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
M + + TY ++ + + + + M+ D++T +I L L
Sbjct: 424 M--SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 109/377 (28%), Positives = 189/377 (50%), Gaps = 8/377 (2%)
Query: 208 VDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNV 267
VD+A+ LF +M P I + L+ + K N+ + + L ++MQ G T+++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 268 LINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK 327
IN C+ +L A ++ M G P+ VT ++L++G C + AV+L+D+MV
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
P+ T+ T+I+GL +A + ++ M +R + Y T+++GL K G + A+
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGF 447
L +M K N V+++ +ID LC+ + A ++ EM G N TY+SL+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 448 FESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDV 507
G+ A + +M + N V ++ LI ++GKL EA + +M+ R PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 508 VAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQSNISHSI 564
+ Y+ +I+G C ++EA ++F M+ CL P++ TYN L+N CK + +
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL-----PNIQTYNTLINGFCKCKRVEDGV 418
Query: 565 DLLNSMMDRGCDPDLVT 581
+L M RG + VT
Sbjct: 419 ELFREMSQRGLVGNTVT 435
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 186/368 (50%), Gaps = 3/368 (0%)
Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
++D+AV L +M FP+ V FN L++ + K + L + M G + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
I+ C + L A+++L +M+ P+ VT +++NG R D ++ M E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
+ + + ++TLI GLF KA +A+ L QM+++GC+P+ V Y +++GLC+ G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
+L +M AN +++++ + AV+++ +M N V Y+ LI+
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINC 302
Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
LC G+ +A + + ML + P+VV ++++I G + EA KL EM ++
Sbjct: 303 LCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM--IQRSID 360
Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
PD TYN+L+N C + + + + M+ + C P++ T N + K + +DG +
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC-KCKRVEDGVE 419
Query: 602 FLNELAIR 609
E++ R
Sbjct: 420 LFREMSQR 427
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 101/248 (40%), Gaps = 30/248 (12%)
Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSS------LMKGFFESGKGHKAVEIWKDMAKNNC 468
+G P F + +GC +F +S L + K AV+++ DM K+
Sbjct: 21 IGNPPTVPS-FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRP 79
Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
+ V ++ L+ + + K + QM + G D+ YS I+ C + AL
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
+ +M+ L +PD+ T + LLN C IS ++ L++ M++ G PD T +
Sbjct: 140 VLAKMMKL--GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
L F + S +V+ M+Q+ P T+ VV LC+
Sbjct: 198 L---------------------FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 649 KRIQAAIN 656
I A+N
Sbjct: 237 GDIDLALN 244
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 101/232 (43%), Gaps = 43/232 (18%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
T+ ++IQ + +GD S +MV +M +
Sbjct: 435 TYTTIIQGFFQAGDCDSAQMVFKQMVSNR------------------------------- 463
Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
+ +++ +L+ + G AL + ++ ++ M + N +N +I+ +C+
Sbjct: 464 -----VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE-MEL--NIFIYNTMIEGMCK 515
Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
G V A LF + ++ PD+ TY T++ GLC + L EA L +M+ DG P T
Sbjct: 516 AGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGT 572
Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
+N LI ++ + +A+L+ M G + + T +L+ + G LDK+
Sbjct: 573 YNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLVTNMLHDGRLDKS 623
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 248 bits (634), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 155/509 (30%), Positives = 259/509 (50%), Gaps = 23/509 (4%)
Query: 164 IIQEGLYHRALE----FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
I++ GL+ L+ + +V ++ LP+ + FN ++ + ++ D I L +M
Sbjct: 56 ILRNGLHDMKLDDAIGLFGGMVKSRP---LPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
+YTY L++ C+ +++ A+ LL +M G P+ VT + L+NG C +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
A LVD M G P+ +T+ TLIHGL L +AV+L+DRMV C PN VTYG ++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
NGL K G +L ME K + I++T+I L K +DA+ L+K+M KG +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
PN V YS+LI LC G+ +A ++L +MI N T+++L+ F + GK +A ++
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
+ DM K + + Y+ L++G C +L +A+ ++ M+S+ C PDVV Y+++I G C
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 520 AGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
+ VE+ +LF EM D TY L+ L + ++ + M+ G PD+
Sbjct: 413 SKRVEDGTELFREM--SHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 580 VTCNIFLTAL--KEKLEAPQDGTDFLNELAIRL------------FKRQRTSGGFKIVEV 625
+T +I L L KLE + D++ + I+L K + G+ +
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCS 530
Query: 626 MLQKFLSPQTSTWERVVQELCRPKRIQAA 654
+ K + P T+ ++ LC + +Q A
Sbjct: 531 LSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 258/523 (49%), Gaps = 72/523 (13%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+++AI LF MV V+ FN +L+ I + + + + + + I+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVE-FNKLLSAIAKMKKFDVVISLGEKM---QRLEIVHGLY 121
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T+N++I CR + A+ L +M EP I T +L++G C R+ +AV L+D+M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
G P +TF LI+GL + + A LVD M +GC PN VTY +++GLC +G+
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241
Query: 314 DKAVSLLDRMVASKC-----------------------------------MPNEVTYGTI 338
D A++LL++M A+K PN VTY ++
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Query: 339 INGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGC 398
I+ L GR D +++L M E+K + N ++ LI KEGK +A KL+ M+++
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361
Query: 399 KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVE 458
P+ Y++L++G C + D+A+++ M++ C + TY++L+KGF +S + E
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421
Query: 459 IWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
++++M+ V + V Y+ LI GL DG A+ V+ QM+S G PD++ YS ++ GLC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 519 NAGSVEEALKLFNEM------------------LCLEPKS---------------QPDVF 545
N G +E+AL++F+ M +C K +P+V
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541
Query: 546 TYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
TYN +++ LC + + + LL M + G P+ T N + A
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 223 bits (567), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 209/398 (52%), Gaps = 4/398 (1%)
Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
EA+ L MV + C+ + ++ V+N + + G AL N + AK I + + F
Sbjct: 208 EAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK---IEADVVIF 263
Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
N +I ++C+ VD+A+ LF+EM + P++ TY +L+ LC R +A LL +M
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 323
Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
P VTFN LI+ K G+ A KL D+M + P+ TYN+L++G C+ LDK
Sbjct: 324 KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDK 383
Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
A + + MV+ C P+ VTY T+I G K R DG + M R + Y+TLI
Sbjct: 384 AKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 443
Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
GLF +G ++A K++KQM+ G P+ + YS L+DGLC GK ++A E+ M +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 503
Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
+ + Y+++++G ++GK +++ ++ N V Y+ +I GLC L+EA +
Sbjct: 504 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 563
Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
+M G P+ Y+++I G + +L EM
Sbjct: 564 KKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 175 bits (444), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 205/429 (47%), Gaps = 18/429 (4%)
Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
+LD+A+ L M P+ V FN L++ + K + L + M + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
LI+ C + + A++LL +M+ P+ VT +++NG R D ++ M E
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
+ + ++TLI GLF KA +A+ L +M+++GC+PN V Y +++GLC+ G D A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
+L +M A+ +++++ + A+ ++K+M N V YS LI
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
LC G+ +A + + M+ + P++V ++++I G EA KL+++M ++
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM--IKRSID 362
Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
PD+FTYN L+N C + + + M+ + C PD+VT N + K + +DGT+
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC-KSKRVEDGTE 421
Query: 602 FLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
E++ R LF K+ + M+ + P T+ ++ LC
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481
Query: 647 RPKRIQAAI 655
+++ A+
Sbjct: 482 NNGKLEKAL 490
Score = 119 bits (298), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 147/302 (48%), Gaps = 9/302 (2%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
TF +LI + G F E + M KR + F + + + +++A ++F
Sbjct: 332 TFNALIDAFVKEGKFVEAEKLYDDMI--KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFE 389
Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
MV + C V ++N+++ + E + + H ++ +T+T+ +I+ +
Sbjct: 390 FMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREM---SHRGLVGDTVTYTTLIQGL 445
Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
G DNA ++F++M PDI TY L+DGLC +L++A+ + D MQ
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
+ +I G+CK G++ L ++ LKG PN VTYNT+I GLC K L +A +LL +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
M +PN TY T+I ++ G A ++ M +F V + L++ + +G+
Sbjct: 566 MKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVANMLHDGR 624
Query: 383 AE 384
+
Sbjct: 625 LD 626
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 17/194 (8%)
Query: 477 VLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
+L +GL D KL +A ++ M+ P +V ++ ++ + + + L +M L
Sbjct: 56 ILRNGL-HDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114
Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLE 594
E ++TYNIL+N C++S IS ++ LL MM G +P +VT + L +++
Sbjct: 115 EIVHG--LYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 595 APQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVV 642
D + E+ R LF + S +V+ M+Q+ P T+ VV
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 643 QELCRPKRIQAAIN 656
LC+ A+N
Sbjct: 233 NGLCKRGDTDLALN 246
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 248 bits (634), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 271/529 (51%), Gaps = 28/529 (5%)
Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
++AI LF M+ V F+ + I + ++ L+F + + I N T
Sbjct: 70 DDAIALFQEMIRSRPLPSLV-DFSRFFSAIARTKQFNLVLDFCKQL---ELNGIAHNIYT 125
Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
N++I CR A + ++ EPD T+ TL+ GL E ++ EAV+L+D M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
+GC P VT+N ++NG+C++G+ A L+ M + + TY+T+I LC G +D
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
A+SL M + VTY +++ GL K G+ DGA +L M R+ N ++ L+
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
KEGK ++A +L+K+M+ +G PN + Y+ L+DG C + EA +L M+ N C+
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
+ T++SL+KG+ + ++++++++K V N V YS+L+ G C+ GK++ A +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD--VFTYNILLN 552
+ +M+S G PDV+ Y ++ GLC+ G +E+AL++F ++ KS+ D + Y ++
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL----QKSKMDLGIVMYTTIIE 481
Query: 553 ALCKQSNISHSIDLLNSMMDRGCDPDLVT----------------CNIFLTALKEKLEAP 596
+CK + + +L S+ +G P+++T NI L ++E AP
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 597 QDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQEL 645
D T N L + + K++E M S S+ + V+ L
Sbjct: 542 NDCT--YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 162/342 (47%), Gaps = 23/342 (6%)
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
D A++L M+ S+ +P+ V + + + + + +E N Y + +
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
I+ + K A + ++M+ G +P+T ++ LI GL GK EA ++ M+ NGC
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
+ TY+S++ G SG A+++ + M + N + YS +I LC DG + A
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
++ +M ++G K VV Y+S++ GLC AG + L +M+ E P+V T+N+LL+
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREI--VPNVITFNVLLDV 307
Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKR 613
K+ + + +L M+ RG P+++T N + DG N
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLM-----------DGYCMQN--------- 347
Query: 614 QRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
R S ++++M++ SP T+ +++ C KR+ +
Sbjct: 348 -RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 134/290 (46%), Gaps = 18/290 (6%)
Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
K +DA+ L+++M+ P+ V +S + R + + + ++ NG A N +T +
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
++ F K A + + K + ++ LI GL +GK+ EA ++ +M+
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
GC+PDVV Y+S+++G+C +G AL L +M E + DVFTY+ ++++LC+ I
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKM--EERNVKADVFTYSTIIDSLCRDGCID 245
Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR------------ 609
+I L M +G +VT N + L K DG L ++ R
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLC-KAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 610 ---LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
K + ++ + M+ + +SP T+ ++ C R+ A N
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANN 354
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 245 bits (625), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 245/456 (53%), Gaps = 6/456 (1%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+++AI LF M ++ F+ +L+ I + + + F + + + I N
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIE-FSKLLSAIAKMNKFDLVISFGEKM---EILGISHNLY 114
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T+N++I CR + A+ L +M EPDI T +L++G C NR+ +AV L+D+M
Sbjct: 115 TYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQM 174
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
G P VTF LI+GL + + A L+D M +GC P+ VTY +++GLC +G+
Sbjct: 175 VEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDT 234
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
D A++LL++M A+K N V Y T+I+ L K D + ME + N YS+L
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
IS L G+ DA +L M+E+ PN V +SALID + GK +AE++ EMI
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSI 354
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
N FTYSSL+ GF + +A ++ + M + +C+ N V Y+ LI+G C+ ++ +
Sbjct: 355 DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGME 414
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
++ +M RG + V Y+++IHG A + A +F +M+ + P++ TYNILL+
Sbjct: 415 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSV--GVHPNILTYNILLDG 472
Query: 554 LCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
LCK ++ ++ + + +PD+ T NI + +
Sbjct: 473 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/356 (29%), Positives = 187/356 (52%), Gaps = 4/356 (1%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+ +A+ L MV+ + TV +F ++++ + L+++A E I P+ +
Sbjct: 164 ISDAVALVDQMVEMGYKPDTV-TFTTLIHGLF---LHNKASEAVALIDRMVQRGCQPDLV 219
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T+ V+ +C+ G D A+ L +M E ++ Y T++D LCK D+A+ L EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
+ G P +T++ LI+ LC G A++L+ +M + PN VT++ LI KG L
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
KA L + M+ PN TY ++ING L R + ++L M + N Y+TL
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
I+G K + + M+L+++M ++G NTV Y+ LI G + D A+ + +M++ G
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
N TY+ L+ G ++GK KA+ +++ + ++ + Y+++I G+C+ GK +
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 208/443 (46%), Gaps = 18/443 (4%)
Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
Y Y ++ + LD+A+ L M FP+ + F+ L++ + K + +
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
M + G N TYN LI+ C L A++LL +M+ P+ VT +++NG R
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
D ++ M E + + ++TLI GLF KA +A+ L +M+++GC+P+ V Y A
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
+++GLC+ G D A +L +M AN YS+++ + A+ ++ +M
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
N + YS LI LC G+ +A + + M+ R P++V +S++I G + +A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
KL+ EM ++ P++FTY+ L+N C + + +L M+ + C P++VT N +
Sbjct: 344 KLYEEM--IKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLIN 401
Query: 588 ALKEKLEAPQDGTDFLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLS 632
K + G + E++ R F+ + + + M+ +
Sbjct: 402 GFC-KAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 633 PQTSTWERVVQELCRPKRIQAAI 655
P T+ ++ LC+ ++ A+
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAM 483
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 23/220 (10%)
Query: 437 AFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWT 496
++ Y +++ + A+ ++ MA++ + + +S L+ + + K
Sbjct: 43 SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGE 102
Query: 497 QMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
+M G ++ Y+ +I+ C + AL L +M+ L +PD+ T N LLN C
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKL--GYEPDIVTLNSLLNGFCH 160
Query: 557 QSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRT 616
+ IS ++ L++ M++ G PD VT + L F +
Sbjct: 161 GNRISDAVALVDQMVEMGYKPDTVTFTTLIHGL---------------------FLHNKA 199
Query: 617 SGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
S +++ M+Q+ P T+ VV LC+ A+N
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 160/578 (27%), Positives = 283/578 (48%), Gaps = 45/578 (7%)
Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEF-HCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
S + + + K++ +++A F + F K +V +N +L I+E R +EF +
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKE----RRVEFVS 132
Query: 179 HIVNAKHM-NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGL 237
+ + I P T TFNL+I+ +C VD A +LF EMP + C+P+ +T+ L+ G
Sbjct: 133 WLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGY 192
Query: 238 CKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNE 297
CK D+ + LL+ M+ G P V +N +++ C+ G + K+V+ M +G +P+
Sbjct: 193 CKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDI 252
Query: 298 VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM----PNEVTYGTIINGLVKLGRAVDGAR 353
VT+N+ I LC +G + A + M + + PN +TY ++ G K+G D
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKT 312
Query: 354 VLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
+ S+ E + Y+ + GL + GK +A + KQM +KG P+ Y+ L+DGLC
Sbjct: 313 LFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372
Query: 414 RVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEV 473
++G +A+ I+ M NG +A TY L+ G+ GK A + ++M +NNC+ N
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432
Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
++L+H L + G++ EA + +M +G D V + ++ GLC +G +++A+++ M
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Query: 534 LC---------------------LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
+E PD+ TY+ LLN LCK + + +L MM
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552
Query: 573 RGCDPDLVTCNIFL----------TALKEKLEAPQDG----TDFLNELAIRLFKRQRTSG 618
PD V NIF+ +A + + + G + N L + L + +
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
+++ M +K +SP T+ +Q LC ++++ A N
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATN 650
Score = 211 bits (536), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 141/516 (27%), Positives = 258/516 (50%), Gaps = 34/516 (6%)
Query: 68 EIFNSTPKLGSYQLGDSTFYSLIQHYANSG-DFKSLEMVLYRMRREKRVVLEKSFIF--I 124
E+F+ P+ G + + TF L++ Y +G K LE++ E VL I+ I
Sbjct: 168 ELFDEMPEKGC-KPNEFTFGILVRGYCKAGLTDKGLELL---NAMESFGVLPNKVIYNTI 223
Query: 125 FKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAK 184
++ + +++ ++ M +E V +FNS ++ + +EG A ++ + +
Sbjct: 224 VSSFCREGRNDDSEKMVEKMREEGLVPDIV-TFNSRISALCKEGKVLDASRIFSDMELDE 282
Query: 185 HMNI-LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
++ + PN++T+NL++K C++GL+++A LF + + + +Y + GL + +
Sbjct: 283 YLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKF 342
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
EA +L +M G P+ ++N+L++GLCK G L A +V M G P+ VTY L
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCL 402
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
+HG C G +D A SLL M+ + C+PN T +++ L K+GR + +L M E+ +
Sbjct: 403 LHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGY 462
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQM-----------------------MEKGCKP 400
++ + ++ GL G+ + A+++ K M +E C P
Sbjct: 463 GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLP 522
Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
+ + YS L++GLC+ G+ EA+ + EM+ ++ Y+ + F + GK A +
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVL 582
Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
KDM K C + Y+ LI GL ++ E + +M +G P++ Y++ I LC
Sbjct: 583 KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEG 642
Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCK 556
VE+A L +EM ++ P+VF++ L+ A CK
Sbjct: 643 EKVEDATNLLDEM--MQKNIAPNVFSFKYLIEAFCK 676
Score = 210 bits (534), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 150/538 (27%), Positives = 260/538 (48%), Gaps = 37/538 (6%)
Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
R+F + +E H ++ + ++ ++++ ++ E +N I+++ ++L V
Sbjct: 25 RIFSSPSEESH-GISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLS--V 81
Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCE--PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
+ + +D A F+ + R E P +Y Y L++ KE R++ L +M +
Sbjct: 82 VSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLC 141
Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
G P TFN+LI LC + + A +L D M KGC PNE T+ L+ G C G DK
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISG 376
+ LL+ M + +PN+V Y TI++ + GR D +++ M E + +++ IS
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 377 LFKEGKAEDAMKLWKQMMEKGC----KPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
L KEGK DA +++ M +PN++ Y+ ++ G C+VG ++A+ + + N
Sbjct: 262 LCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIREND 321
Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
A+ +Y+ ++G GK +A + K M + Y++L+ GLC+ G L +A+
Sbjct: 322 DLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAK 381
Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNI 549
+ M G PD V Y ++HG C+ G V+ A L EM+ CL P+ +T NI
Sbjct: 382 TIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL-----PNAYTCNI 436
Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
LL++L K IS + +LL M ++G D VTCNI + L G+ L++ AI
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLC--------GSGELDK-AIE 487
Query: 610 LFKRQRTSGGFK-----------IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
+ K R G + + +++ P T+ ++ LC+ R A N
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKN 545
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 229/509 (44%), Gaps = 61/509 (11%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK----SFIFIFKAYGKAHLVEEAIRL 140
TF S I G + M ++ + L + ++ + K + K L+E+A L
Sbjct: 254 TFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTL 313
Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRA---------------LEFYNHIVNA-- 183
F + + E +++S+N L +++ G + A + YN +++
Sbjct: 314 FES-IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLC 372
Query: 184 ---------------KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
K + P+ +T+ ++ C +G VD A L +EM NC P+ Y
Sbjct: 373 KLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAY 432
Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
T L+ L K R+ EA LL +M G VT N++++GLC +GEL +A ++V M
Sbjct: 433 TCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGM 492
Query: 289 FLKG-----------------------CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
+ G CLP+ +TY+TL++GLC G +A +L M+
Sbjct: 493 RVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMG 552
Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
K P+ V Y I+ K G+ RVL ME++ H + Y++LI GL + + +
Sbjct: 553 EKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
L +M EKG PN Y+ I LC K ++A +L EM+ A N F++ L++
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIE 672
Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
F + A E++ + A + C E YS++ + L G+L +A + +L RG +
Sbjct: 673 AFCKVPDFDMAQEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEML 534
Y ++ LC +E A + ++M+
Sbjct: 732 GTFLYKDLVESLCKKDELEVASGILHKMI 760
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/480 (31%), Positives = 244/480 (50%), Gaps = 16/480 (3%)
Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
LP+ FN ++ + ++ D I L +M ++YTY L++ C+ +++ A+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALA 66
Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
LL +M G P+ VT + L+NG C + A LVD M G P+ +T+ TLIHGL
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
L +AV+L+DRMV C PN VTYG ++NGL K G +L ME K +
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186
Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
I++T+I L K +DA+ L+K+M KG +PN V YS+LI LC G+ +A ++L +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
I N T+++L+ F + GK +A ++ DM K + + Y+ LI+G C +L
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
+A+ ++ M+S+ C PD+ Y+++I G C + VE+ +LF EM D TY
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM--SHRGLVGDTVTYT 364
Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFLNEL 606
L+ L + ++ + M+ G PD++T +I L L KLE + D++ +
Sbjct: 365 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 424
Query: 607 AIRL------------FKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
I+L K + G+ + + K + P T+ ++ LC + +Q A
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/504 (29%), Positives = 248/504 (49%), Gaps = 71/504 (14%)
Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
++ FN +L+ I + + + + + + I N T+N++I CR + A+
Sbjct: 9 SIFEFNKLLSAIAKMKKFDLVISLGEKM---QRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
L +M EP I T +L++G C R+ +AV L+D+M G P +TF LI+GL
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC---- 328
+ + A LVD M +GC PN VTY +++GLC +G++D A +LL++M A+K
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 329 -------------------------------MPNEVTYGTIINGLVKLGRAVDGARVLMS 357
PN VTY ++I+ L GR D +++L
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 358 MEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGK 417
M E+K + N ++ LI KEGK +A KL M+++ P+ Y++LI+G C +
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDR 305
Query: 418 PDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSV 477
D+A+++ M++ C + TY++L+KGF +S + E++++M+ V + V Y+
Sbjct: 306 LDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 365
Query: 478 LIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM---- 533
LI GL DG A+ V+ QM+S G PD++ YS ++ GLCN G +E+AL++F+ M
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425
Query: 534 --------------LCLEPKS---------------QPDVFTYNILLNALCKQSNISHSI 564
+C K +P+V TYN +++ LC + + +
Sbjct: 426 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 485
Query: 565 DLLNSMMDRGCDPDLVTCNIFLTA 588
LL M + G PD T N + A
Sbjct: 486 ALLKKMKEDGPLPDSGTYNTLIRA 509
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/398 (32%), Positives = 207/398 (52%), Gaps = 4/398 (1%)
Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
EA+ L MV + C+ + ++ V+N + + G A N + AK I + + F
Sbjct: 133 EAVALVDRMV-QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK---IEADVVIF 188
Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
N +I ++C+ VD+A+ LF+EM + P++ TY +L+ LC R +A LL +M
Sbjct: 189 NTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIE 248
Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
P VTFN LI+ K G+ A KL D+M + P+ TYN+LI+G C+ LDK
Sbjct: 249 KKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDK 308
Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
A + + MV+ C P+ TY T+I G K R DG + M R + Y+TLI
Sbjct: 309 AKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQ 368
Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
GLF +G ++A K++KQM+ G P+ + YS L+DGLC GK ++A E+ M +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKL 428
Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
+ + Y+++++G ++GK +++ ++ N V Y+ +I GLC L+EA +
Sbjct: 429 DIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALL 488
Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
+M G PD Y+++I G + +L EM
Sbjct: 489 KKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 219 bits (557), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 134/452 (29%), Positives = 232/452 (51%), Gaps = 8/452 (1%)
Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
+ Y + +A+ L MV+ + T+ +F ++++ + L+++A E +
Sbjct: 86 LLNGYCHGKRISDAVALVDQMVEMGYRPDTI-TFTTLIHGLF---LHNKASEAVALVDRM 141
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
PN +T+ +V+ +C+ G +D A L +M E D+ + T++D LCK +
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
D+A+ L EM+ G P VT++ LI+ LC G A++L+ +M K PN VT+N L
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
I +G +A L D M+ P+ TY ++ING R ++ M +
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
+ Y+TLI G K + ED +L+++M +G +TV Y+ LI GL G D A++
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381
Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
+ +M+++G + TYS L+ G +GK KA+E++ M K+ + Y+ +I G+C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441
Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
+ GK+ + ++ + +G KP+VV Y++MI GLC+ ++EA L +M E PD
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK--EDGPLPD 499
Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
TYN L+ A + + + S +L+ M R C
Sbjct: 500 SGTYNTLIRAHLRDGDKAASAELIREM--RSC 529
Score = 116 bits (291), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 147/302 (48%), Gaps = 9/302 (2%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF--IFKAYGKAHLVEEAIRLFH 142
TF +LI + G F E + M KR + F + + + +++A ++F
Sbjct: 257 TFNALIDAFVKEGKFVEAEKLHDDMI--KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
MV + C + ++N+++ + E + + H ++ +T+T+ +I+ +
Sbjct: 315 FMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREM---SHRGLVGDTVTYTTLIQGL 370
Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
G DNA ++F++M PDI TY L+DGLC +L++A+ + D MQ
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
+ +I G+CK G++ L ++ LKG PN VTYNT+I GLC K L +A +LL +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
M +P+ TY T+I ++ G A ++ M +F V + L++ + +G+
Sbjct: 491 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRF-VGDASTIGLVANMLHDGR 549
Query: 383 AE 384
+
Sbjct: 550 LD 551
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 16/241 (6%)
Query: 428 MINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGK 487
M+ + + F ++ L+ + K + + + M + +N Y++LI+ C +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 488 LREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTY 547
+ A + +M+ G +P +V SS+++G C+ + +A+ L ++M +E +PD T+
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM--VEMGYRPDTITF 118
Query: 548 NILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE------------KLEA 595
L++ L + S ++ L++ M+ RGC P+LVT + + L + K+EA
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 596 PQDGTD--FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQA 653
+ D N + L K + + + M K + P T+ ++ LC R
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 654 A 654
A
Sbjct: 239 A 239
Score = 56.2 bits (134), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 19/149 (12%)
Query: 527 LKLFNEMLCLEPKSQP-----DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVT 581
+K F+ ++ L K Q +++TYNIL+N C++S IS ++ LL MM G +P +VT
Sbjct: 23 MKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVT 82
Query: 582 CNIFLTAL--KEKLEAPQDGTDFLNELAIR------------LFKRQRTSGGFKIVEVML 627
+ L +++ D + E+ R LF + S +V+ M+
Sbjct: 83 LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 142
Query: 628 QKFLSPQTSTWERVVQELCRPKRIQAAIN 656
Q+ P T+ VV LC+ I A N
Sbjct: 143 QRGCQPNLVTYGVVVNGLCKRGDIDLAFN 171
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 244 bits (622), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/470 (30%), Positives = 239/470 (50%), Gaps = 37/470 (7%)
Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
A++ + +V ++ P+ + FN ++ V ++ + I L +M D+YTY
Sbjct: 67 AVDLFGDMVKSRP---FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
++ C+ ++L A+ +L +M G P VT + L+NG C + + A LVD M G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
P+ T+ TLIHGL L +AV+L+D+MV C P+ VTYGT++NGL K G
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
+L ME+ K + IY+T+I GL K +DA+ L+ +M KG +P+ YS+LI L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
C G+ +A +L +MI N T+S+L+ F + GK +A +++ +M K + +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
YS LI+G C +L EA+ ++ M+S+ C P+VV YS++I G C A VEE ++LF E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 533 M---------------------------------LCLEPKSQPDVFTYNILLNALCKQSN 559
M + P++ TYNILL+ LCK
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
++ ++ + + +PD+ T NI + + K +DG + L+++
Sbjct: 484 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC-KAGKVEDGWELFCNLSLK 532
Score = 236 bits (601), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 239/465 (51%), Gaps = 14/465 (3%)
Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
+ + +S+LN A+ + +V M P+T TF +I + A+
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMV---EMGYKPDTFTFTTLIHGLFLHNKASEAVA 209
Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
L +M R C+PD+ TY T+++GLCK +D A+ LL +M+ V +N +I+GLC
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269
Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
K + A L M KG P+ TY++LI LC G A LL M+ K PN V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329
Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
T+ +I+ VK G+ V+ ++ M +R + + YS+LI+G + ++A +++ M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389
Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
+ K C PN V YS LI G C+ + +E E+ EM G N TY++L+ GFF++
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449
Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
A ++K M N + Y++L+ GLC++GKL +A +V+ + +PD+ Y+ M
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509
Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
I G+C AG VE+ +LF L L+ S P+V YN +++ C++ + + LL M +
Sbjct: 510 IEGMCKAGKVEDGWELFCN-LSLKGVS-PNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
G P+ T N T ++ +L +DG E + L K R+ G
Sbjct: 568 GPLPNSGTYN---TLIRARL---RDGD---REASAELIKEMRSCG 603
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 134/468 (28%), Positives = 235/468 (50%), Gaps = 6/468 (1%)
Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
+ Y + + +A+ L MV E K +F ++++ + L+++A E +
Sbjct: 159 LLNGYCHSKRISDAVALVDQMV-EMGYKPDTFTFTTLIHGLF---LHNKASEAVALVDQM 214
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
P+ +T+ V+ +C+ G +D A+ L ++M E D+ Y T++DGLCK +
Sbjct: 215 VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHM 274
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
D+A+ L EM G P T++ LI+ LC G A++L+ +M + PN VT++ L
Sbjct: 275 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 334
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
I +G L +A L D M+ P+ TY ++ING R + + M +
Sbjct: 335 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 394
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
N YSTLI G K + E+ M+L+++M ++G NTV Y+ LI G + D A+
Sbjct: 395 FPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 454
Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
+ +M++ G N TY+ L+ G ++GK KA+ +++ + ++ + Y+++I G+C
Sbjct: 455 VFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPD 543
+ GK+ + ++ + +G P+V+AY++MI G C GS EEA L +M E P+
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM--KEDGPLPN 572
Query: 544 VFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKE 591
TYN L+ A + + S +L+ M G D T + L +
Sbjct: 573 SGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD 620
Score = 172 bits (437), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 207/429 (48%), Gaps = 18/429 (4%)
Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
++D+AV L +M FP+ V FN L++ + K + L + M G + TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
I+ C + L A+++L +M+ P+ VT +++NG R D ++ M E
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
+ + + ++TLI GLF KA +A+ L QM+++GC+P+ V Y +++GLC+ G D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
+L +M A+ Y++++ G + A+ ++ +M + YS LI
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302
Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
LC G+ +A + + M+ R P+VV +S++I G + EA KL++EM ++
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM--IKRSID 360
Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
PD+FTY+ L+N C + + + M+ + C P++VT + + K + ++G +
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC-KAKRVEEGME 419
Query: 602 FLNELAIR---------------LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELC 646
E++ R F+ + + + M+ + P T+ ++ LC
Sbjct: 420 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 647 RPKRIQAAI 655
+ ++ A+
Sbjct: 480 KNGKLAKAM 488
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 101/248 (40%), Gaps = 30/248 (12%)
Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSS------LMKGFFESGKGHKAVEIWKDMAKNNC 468
+G P F + +GC +F +S L + K AV+++ DM K+
Sbjct: 21 IGNPPTVPS-FFNLCGSGCWERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRP 79
Query: 469 VYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
+ V ++ L+ + + K + QM + G D+ YS I+ C + AL
Sbjct: 80 FPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALA 139
Query: 529 LFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTA 588
+ +M+ L +PD+ T + LLN C IS ++ L++ M++ G PD T +
Sbjct: 140 VLAKMMKL--GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG 197
Query: 589 LKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
L F + S +V+ M+Q+ P T+ VV LC+
Sbjct: 198 L---------------------FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 649 KRIQAAIN 656
I A++
Sbjct: 237 GDIDLALS 244
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 162/545 (29%), Positives = 265/545 (48%), Gaps = 19/545 (3%)
Query: 49 KQMETEPQGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYR 108
K+++ + +S P + F S ++ TF +I+ A G S++ +L +
Sbjct: 42 KELDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQ 101
Query: 109 MRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEG 168
M+ + E FI + Y + L E A+ +F+ + EF C +VK +N VL+ ++ E
Sbjct: 102 MKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR-IKEFGCDPSVKIYNHVLDTLLGE- 159
Query: 169 LYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIY 228
+R Y + K PN T+N+++K +C+ VD A +L EM + C PD
Sbjct: 160 --NRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAV 217
Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
+Y T++ +C+ + E L + + P +N LINGLCK + A +L+ M
Sbjct: 218 SYTTVISSMCEVGLVKEGRELAERFE-----PVVSVYNALINGLCKEHDYKGAFELMREM 272
Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
KG PN ++Y+TLI+ LC G ++ A S L +M+ C PN T +++ G G
Sbjct: 273 VEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTT 332
Query: 349 VDGARVLMSMEERKFHV--NEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYS 406
D + M R F + N Y+TL+ G G A+ ++ M E GC PN Y
Sbjct: 333 FDALDLWNQMI-RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 407 ALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
+LI+G + G D A I +M+ +GC N Y+++++ K +A + + M+K
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE 451
Query: 467 NCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRG-CKPDVVAYSSMIHGLCNAGSVEE 525
NC + ++ I GLC+ G+L A V+ QM + C P++V Y+ ++ GL A +EE
Sbjct: 452 NCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEE 511
Query: 526 ALKLFNE--MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
A L E M +E S TYN LL+ C ++ L+ MM G PD +T N
Sbjct: 512 AYGLTREIFMRGVEWSSS----TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMN 567
Query: 584 IFLTA 588
+ + A
Sbjct: 568 MIILA 572
Score = 238 bits (608), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 165/524 (31%), Positives = 249/524 (47%), Gaps = 45/524 (8%)
Query: 89 LIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDE- 147
L+ N + K L+ V+ R+R+E V L F FK+ ++L + F M+ +
Sbjct: 31 LLTESPNHAEIKELD-VVKRLRQESCVPLALHF---FKSIANSNLFKHTPLTFEVMIRKL 86
Query: 148 --------------------FHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMN 187
FHC + F SV++V Q GL RA+E + I K
Sbjct: 87 AMDGQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVGLAERAVEMFYRI---KEFG 141
Query: 188 ILPNTLTFNLVIKTVCRLGLVDNAIQL----FREMPVRNCEPDIYTYCTLMDGLCKENRL 243
P+ +N V+ T+ L +N IQ+ +R+M EP+++TY L+ LCK N++
Sbjct: 142 CDPSVKIYNHVLDTL----LGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
D A LL EM GC P V++ +I+ +C+ G + +L + P YN L
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNAL 252
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
I+GLC + + A L+ MV PN ++Y T+IN L G+ L M +R
Sbjct: 253 INGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGC 312
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK-GCKPNTVVYSALIDGLCRVGKPDEAE 422
H N Y S+L+ G F G DA+ LW QM+ G +PN V Y+ L+ G C G +A
Sbjct: 313 HPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAV 372
Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
+ M GC+ N TY SL+ GF + G AV IW M + C N V Y+ ++ L
Sbjct: 373 SVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEAL 432
Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
C K +EA + M C P V +++ I GLC+AG ++ A K+F +M + + P
Sbjct: 433 CRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQME-QQHRCPP 491
Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
++ TYN LL+ L K + I + L + RG + T N L
Sbjct: 492 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Score = 199 bits (505), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 137/500 (27%), Positives = 238/500 (47%), Gaps = 31/500 (6%)
Query: 166 QEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR--NC 223
QE AL F+ I N+ P LTF ++I+ + G VD+ L ++M ++ +C
Sbjct: 52 QESCVPLALHFFKSIANSNLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC 109
Query: 224 EPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK 283
D++ +++ + + AV + ++ GC P+ +N +++ L +
Sbjct: 110 SEDLFI--SVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYM 167
Query: 284 LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
+ +M G PN TYN L+ LC +D A LL M C P+ V+Y T+I+ +
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
++G +G + +F +Y+ LI+GL KE + A +L ++M+EKG PN +
Sbjct: 228 EVGLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
YS LI+ LC G+ + A L +M+ GC N +T SSL+KG F G A+++W M
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM 342
Query: 464 AKNNCVY-NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGS 522
+ + N V Y+ L+ G C G + +A V++ M GC P++ Y S+I+G GS
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 523 VEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
++ A+ ++N+ML P+V Y ++ ALC+ S + L+ M C P + T
Sbjct: 403 LDGAVYIWNKML--TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Query: 583 NIFLTAL----------------KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVM 626
N F+ L +++ P + + NEL L K R + + +
Sbjct: 461 NAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTY-NELLDGLAKANRIEEAYGLTREI 519
Query: 627 LQKFLSPQTSTWERVVQELC 646
+ + +ST+ ++ C
Sbjct: 520 FMRGVEWSSSTYNTLLHGSC 539
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 179/402 (44%), Gaps = 42/402 (10%)
Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
V +N+++N + +E Y A E +V I PN ++++ +I +C G ++ A
Sbjct: 245 VVSVYNALINGLCKEHDYKGAFELMREMVEK---GISPNVISYSTLINVLCNSGQIELAF 301
Query: 213 QLFREMPVRNCEPDIYT------------------------------------YCTLMDG 236
+M R C P+IYT Y TL+ G
Sbjct: 302 SFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQG 361
Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
C + +AV + M+ GC P T+ LING K G L A + + M GC PN
Sbjct: 362 FCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPN 421
Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
V Y ++ LC +A SL++ M C P+ T+ I GL GR +V
Sbjct: 422 VVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFR 481
Query: 357 SMEER-KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
ME++ + N Y+ L+ GL K + E+A L +++ +G + ++ Y+ L+ G C
Sbjct: 482 QMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNA 541
Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWK--DMAKNNCVYNEV 473
G P A +++ +M+ +G + + T + ++ + + GK +A ++ + + +
Sbjct: 542 GLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVI 601
Query: 474 CYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
Y+ +I GLC + ++ +M+S G P + +S +I+
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 191/419 (45%), Gaps = 42/419 (10%)
Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
TP+TF V+I L +G++ L+ M L+G +E + ++I G ++AV +
Sbjct: 75 TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134
Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
R+ C P+ Y +++ L+ R V M+ F N + Y+ L+ L K
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEIL--FEMINNGCAANAF 438
K + A KL +M KGC P+ V Y+ +I +C VG E E+ FE +
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPV-------VS 247
Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
Y++L+ G + A E+ ++M + N + YS LI+ LC G++ A TQM
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
L RGC P++ SS++ G G+ +AL L+N+M+ QP+V YN L+ C
Sbjct: 308 LKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI-RGFGLQPNVVAYNTLVQGFCSHG 366
Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
NI ++ + + M + GC P++ T + ++ DG A+ ++ + TSG
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR--GSLDG-------AVYIWNKMLTSG 417
Query: 619 -------------------GFK----IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
FK ++E+M ++ +P T+ ++ LC R+ A
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Score = 130 bits (327), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 154/346 (44%), Gaps = 40/346 (11%)
Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
F T + + C + + +S++ G AL+ +N ++ + + PN + +N +++
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMI--RGFGLQPNVVAYNTLVQ 360
Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
C G + A+ +F M C P+I TY +L++G K LD AV + ++M GC P
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420
Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
V + ++ LC++ + A L++ M + C P+ T+N I GLC G LD A +
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 321 DRMVAS-KCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
+M +C PN VTY +++GL K R + + + R + Y+TL+ G
Sbjct: 481 RQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Query: 380 EGKAEDAMKLWKQMMEKG---------------CK----------------------PNT 402
G A++L +MM G CK P+
Sbjct: 541 AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDV 600
Query: 403 VVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
+ Y+ +I GLCR ++ +L MI+ G + T+S L+ F
Sbjct: 601 ISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 149/302 (49%), Gaps = 10/302 (3%)
Query: 112 EKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYH 171
+ VV + + F ++G + +A+ +F M +E C ++++ S++N + G
Sbjct: 349 QPNVVAYNTLVQGFCSHGN---IVKAVSVFSHM-EEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 172 RALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYC 231
A+ +N ++ + PN + + +++ +CR A L M NC P + T+
Sbjct: 405 GAVYIWNKMLTS---GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFN 461
Query: 232 TLMDGLCKENRLDEAVLLLDEM-QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
+ GLC RLD A + +M Q C P VT+N L++GL K + A L +F+
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
+G + TYNTL+HG C G A+ L+ +M+ P+E+T II K G+A
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581
Query: 351 GARVL--MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
A++L +S RK+ + Y+ +I GL + ED + L ++M+ G P+ +S L
Sbjct: 582 AAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVL 641
Query: 409 ID 410
I+
Sbjct: 642 IN 643
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 11/164 (6%)
Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
GC P V Y+ ++ L ++ ++ +M +P+VFTYN+LL ALCK + +
Sbjct: 141 GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK--RDGFEPNVFTYNVLLKALCKNNKVD 198
Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTAL---------KEKLEAPQDGTDFLNELAIRLFK 612
+ LL M ++GC PD V+ ++++ +E E + N L L K
Sbjct: 199 GAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCK 258
Query: 613 RQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
G F+++ M++K +SP ++ ++ LC +I+ A +
Sbjct: 259 EHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 92/190 (48%), Gaps = 9/190 (4%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHT 143
TF + I+ ++G E V +M ++ R ++ + KA+ +EEA L
Sbjct: 459 TFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI-VNAKHMNILPNTLTFNLVIKTV 202
+ + + ++N++L+ GL AL+ + V+ K P+ +T N++I
Sbjct: 519 IFMR-GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKS----PDEITMNMIILAY 573
Query: 203 CRLGLVDNAIQLFREMPV--RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
C+ G + A Q+ + R PD+ +Y ++ GLC+ N ++ V+LL+ M G P
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 261 TPVTFNVLIN 270
+ T++VLIN
Sbjct: 634 SIATWSVLIN 643
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 232/420 (55%), Gaps = 5/420 (1%)
Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
+L+ + H+V + LP+ F+ ++ + ++ D I L+ +M + ++ T
Sbjct: 65 SLDLFFHMVQCRP---LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
L++ C+ ++L A+ L +M G P+ VTF L+NG C+ + A + D M G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
PN V YNT+I GLC +D A+ LL+RM P+ VTY ++I+GL GR D
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
R++ M +R+ + + + ++ LI KEG+ +A + +++M+ + P+ V YS LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
C + DEAEE+ M++ GC + TYS L+ G+ +S K ++++ +M++ V N
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNT 361
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
V Y++LI G C GKL A ++ +M+ G P+++ Y+ ++HGLC+ G +E+AL + +
Sbjct: 362 VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILAD 421
Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
M + D+ TYNI++ +CK ++ + D+ S+ +G PD+ T + L +K
Sbjct: 422 M--QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/447 (29%), Positives = 230/447 (51%), Gaps = 10/447 (2%)
Query: 134 VEEAIRLFHTMVDEFHCKR--TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
+++++ LF MV C+ ++ F+ +L+ I + Y + + + + + I N
Sbjct: 62 LDDSLDLFFHMV---QCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM---QMLGIPHN 115
Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
T N+++ CR + A+ +M EP I T+ +L++G C+ +R+ +A+ + D
Sbjct: 116 LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFD 175
Query: 252 EMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKG 311
+M G P V +N +I+GLCK+ ++ A L++ M G P+ VTYN+LI GLC G
Sbjct: 176 QMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSG 235
Query: 312 NLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYS 371
A ++ M + P+ T+ +I+ VK GR + M R + YS
Sbjct: 236 RWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYS 295
Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
LI GL + ++A +++ M+ KGC P+ V YS LI+G C+ K + ++ EM
Sbjct: 296 LLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
G N TY+ L++G+ +GK + A EI++ M N + Y+VL+HGLC++GK+ +A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
++ M G D+V Y+ +I G+C AG V +A ++ + C PD++TY ++
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNC--QGLMPDIWTYTTMM 473
Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPD 578
L K+ + L M + G P+
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPN 500
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 192/386 (49%), Gaps = 2/386 (0%)
Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
R +D+++ LF M P I + L+ + K + D + L ++MQ+ G
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
T N+L+N C+ +L A + M G P+ VT+ +L++G C + A+ + D+M
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
V PN V Y TII+GL K + + +L ME+ + Y++LISGL G+
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
DA ++ M ++ P+ ++ALID + G+ EAEE EMI + TYS L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
+ G + +A E++ M C + V YS+LI+G C+ K+ ++ +M RG
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGV 357
Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
+ V Y+ +I G C AG + A ++F M+ P++ TYN+LL+ LC I +
Sbjct: 358 VRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC--GVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
+ +L M G D D+VT NI + +
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGM 441
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 174/356 (48%), Gaps = 5/356 (1%)
Query: 120 SFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNH 179
+F + + + V +A+ +F MV + K V +N++++ + + AL+ N
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGY-KPNVVIYNTIIDGLCKSKQVDNALDLLNR 211
Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
+ + I P+ +T+N +I +C G +A ++ M R PD++T+ L+D K
Sbjct: 212 M---EKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
E R+ EA +EM P VT+++LI GLC L A ++ M KGC P+ VT
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
Y+ LI+G C ++ + L M + N VTY +I G + G+ + M
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
H N Y+ L+ GL GK E A+ + M + G + V Y+ +I G+C+ G+
Sbjct: 389 FCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVA 448
Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
+A +I + G + +TY+++M G ++ G +A +++ M ++ + NE CY
Sbjct: 449 DAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE-CY 503
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 145/299 (48%), Gaps = 16/299 (5%)
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
+S L+S + K K + + LW+QM G N + L++ CR + A L +MI
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
G + T+ SL+ GF + + A+ ++ M N V Y+ +I GLC+ ++
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
A + +M G PDVV Y+S+I GLC++G +A ++ + M + + PDVFT+N
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT--KREIYPDVFTFNA 261
Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL--KEKLEAPQDGTDFL---- 603
L++A K+ +S + + M+ R DPD+VT ++ + L +L+ ++ F+
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 604 --------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
+ L K ++ G K+ M Q+ + T T+ ++Q CR ++ A
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVA 380
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 243/459 (52%), Gaps = 13/459 (2%)
Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
EA+ LF MV E ++ F +LNVI + + + +H+ + M + + T
Sbjct: 55 EALDLFTHMV-ESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL---QIMGVSHDLYTC 110
Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
NL++ C+ A +M EPDI T+ +L++G C NR++EA+ ++++M
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
G P V + +I+ LCKNG + A L D M G P+ V Y +L++GLC G
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
A SLL M K P+ +T+ +I+ VK G+ +D + M N + Y++LI+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
G EG ++A +++ M KGC P+ V Y++LI+G C+ K D+A +I +EM G
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
N TY++L++GF + GK + A E++ M N Y+VL+H LC +GK+++A M++
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 496 TQMLSR---GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL- 551
M R G P++ Y+ ++HGLC G +E+AL +F +M K + D+ +
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM----RKREMDIGIITYTII 466
Query: 552 -NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
+CK + ++++L S+ +G P++VT ++ L
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGL 505
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 131/418 (31%), Positives = 219/418 (52%), Gaps = 8/418 (1%)
Query: 164 IIQEGL----YHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMP 219
I++ GL ++ AL+ + H+V ++ LP+ + F ++ + ++ D I L +
Sbjct: 43 ILRNGLHSLQFNEALDLFTHMVESRP---LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 220 VRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
+ D+YT LM+ C+ ++ A L +M G P VTF LING C +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTII 339
A +V+ M G P+ V Y T+I LC G+++ A+SL D+M P+ V Y +++
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 340 NGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCK 399
NGL GR D +L M +RK + ++ LI KEGK DA +L+ +M+
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 400 PNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEI 459
PN Y++LI+G C G DEA ++ + M GC + Y+SL+ GF + K A++I
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 460 WKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
+ +M++ N + Y+ LI G + GK A+ V++ M+SRG P++ Y+ ++H LC
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 520 AGSVEEALKLFNEMLCLEPKS-QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
G V++AL +F +M E P+++TYN+LL+ LC + ++ + M R D
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 122/383 (31%), Positives = 199/383 (51%), Gaps = 6/383 (1%)
Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
+ +F S++N A+ N +V M I P+ + + +I ++C+ G V+ A+
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMV---EMGIKPDVVMYTTIIDSLCKNGHVNYALS 198
Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
LF +M PD+ Y +L++GLC R +A LL M P +TFN LI+
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
K G+ A +L + M PN TY +LI+G C++G +D+A + M C P+ V
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
Y ++ING K + D ++ M ++ N Y+TLI G + GK A +++ M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN---NGCAANAFTYSSLMKGFFES 450
+ +G PN Y+ L+ LC GK +A I +M +G A N +TY+ L+ G +
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
GK KA+ +++DM K + Y+++I G+C+ GK++ A ++ + S+G KP+VV Y
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498
Query: 511 SSMIHGLCNAGSVEEALKLFNEM 533
++MI GL G EA LF +M
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKM 521
Score = 155 bits (392), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 151/287 (52%), Gaps = 6/287 (2%)
Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
K V +FN++++ ++EG + A E YN ++ M+I PN T+ +I C G VD
Sbjct: 244 KPDVITFNALIDAFVKEGKFLDAEELYNEMI---RMSIAPNIFTYTSLINGFCMEGCVDE 300
Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
A Q+F M + C PD+ Y +L++G CK ++D+A+ + EM G +T+ LI
Sbjct: 301 ARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQ 360
Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK--- 327
G + G+ A ++ +M +G PN TYN L+H LC G + KA+ + + M +
Sbjct: 361 GFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDG 420
Query: 328 CMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
PN TY +++GL G+ V M +R+ + Y+ +I G+ K GK ++A+
Sbjct: 421 VAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
L+ + KG KPN V Y+ +I GL R G EA + +M +G +
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 197/414 (47%), Gaps = 15/414 (3%)
Query: 60 KSEQPF-SDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFK-SLEMV--LYRMRREKRV 115
+S QP+ + KLG ++ TF SLI + + ++ MV + M + V
Sbjct: 119 QSSQPYLASSFLGKMMKLG-FEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV 177
Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
V+ + I + K V A+ LF M + + + V + S++N + G + A
Sbjct: 178 VM---YTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
+ K I P+ +TFN +I + G +A +L+ EM + P+I+TY +L++
Sbjct: 234 LLRGMTKRK---IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLP 295
G C E +DEA + M+ GCFP V + LING CK ++ A K+ M KG
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
N +TY TLI G G + A + MV+ PN TY +++ L G+ +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 356 MSMEERKFH---VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
M++R+ N + Y+ L+ GL GK E A+ +++ M ++ + Y+ +I G+
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKN 466
C+ GK A + + + G N TY++++ G F G H+A +++ M ++
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 222/430 (51%), Gaps = 5/430 (1%)
Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
R S+ +L + ++ AL+ + +V H LP+ + F ++ + ++ D
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMV---HSRPLPSIIDFTRLLSVIAKMNRYDVV 102
Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
I LF +M + P + T +M +C ++ A L +M G P VTF L+NG
Sbjct: 103 ISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNG 162
Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
C + A L D + G PN VTY TLI LC +L+ AV L ++M + PN
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
VTY ++ GL ++GR D A +L M +R+ N ++ LI K GK +A +L+
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
M++ P+ Y +LI+GLC G DEA ++ + M NGC N Y++L+ GF +S
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSK 342
Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
+ ++I+ +M++ V N + Y+VLI G C G+ A+ V+ QM SR PD+ Y+
Sbjct: 343 RVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYN 402
Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
++ GLC G VE+AL +F M + + ++ TY I++ +CK + + DL S+
Sbjct: 403 VLLDGLCCNGKVEKALMIFEYM--RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460
Query: 572 DRGCDPDLVT 581
+G P+++T
Sbjct: 461 SKGMKPNVIT 470
Score = 233 bits (594), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 195/344 (56%)
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
P+ +TF ++ C +++AI LF ++ +P++ TY TL+ LCK L+ AV L
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
++M +G P VT+N L+ GLC+ G G AA L+ +M + PN +T+ LI
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
G L +A L + M+ P+ TYG++INGL G + ++ ME + NE I
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
Y+TLI G K + ED MK++ +M +KG NT+ Y+ LI G C VG+PD A+E+ +M
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
+ + TY+ L+ G +GK KA+ I++ M K N V Y+++I G+C+ GK+
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM 533
+A ++ + S+G KP+V+ Y++MI G C G + EA LF +M
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/445 (30%), Positives = 229/445 (51%), Gaps = 10/445 (2%)
Query: 136 EAIRLFHTMVDEFHCKR--TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+A+ LF MV H + ++ F +L+VI + Y + + + + + I P
Sbjct: 66 DALDLFTRMV---HSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM---QILGIPPLLC 119
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T N+V+ VC A +M EPD+ T+ +L++G C NR+++A+ L D++
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
G P VT+ LI LCKN L A +L + M G PN VTYN L+ GLC G
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
A LL M+ + PN +T+ +I+ VK+G+ ++ + M + + + + Y +L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
I+GL G ++A +++ M GC PN V+Y+ LI G C+ + ++ +I +EM G
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
AN TY+ L++G+ G+ A E++ M+ + Y+VL+ GLC +GK+ +A M
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
++ M R ++V Y+ +I G+C G VE+A LF + +P+V TY +++
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF--SKGMKPNVITYTTMISG 477
Query: 554 LCKQSNISHSIDLLNSMMDRGCDPD 578
C++ I + L M + G P+
Sbjct: 478 FCRRGLIHEADSLFKKMKEDGFLPN 502
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/446 (28%), Positives = 215/446 (48%), Gaps = 23/446 (5%)
Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
++A+ LF M P I + L+ + K NR D + L ++MQ+ G P T N++
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIV 124
Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
++ +C + + RA+ + M G P+ VT+ +L++G C ++ A++L D+++
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184
Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
PN VTY T+I L K + M N Y+ L++GL + G+ DA
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244
Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
L + MM++ +PN + ++ALID +VGK EA+E+ MI + FTY SL+ G
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304
Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
G +A +++ M +N C NEV Y+ LIHG C+ ++ + ++ +M +G + +
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364
Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
Y+ +I G C G + A ++FN+M ++ PD+ TYN+LL+ LC + ++ +
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMS--SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFE 422
Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
M R D ++VT I + + KL +D D L
Sbjct: 423 YMRKREMDINIVTYTIIIQGMC-KLGKVEDAFDLFCSL--------------------FS 461
Query: 629 KFLSPQTSTWERVVQELCRPKRIQAA 654
K + P T+ ++ CR I A
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEA 487
Score = 180 bits (456), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 177/355 (49%), Gaps = 3/355 (0%)
Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
+F S+LN A+ ++ I+ M PN +T+ +I+ +C+ +++A++LF
Sbjct: 155 TFTSLLNGYCHWNRIEDAIALFDQILG---MGFKPNVVTYTTLIRCLCKNRHLNHAVELF 211
Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
+M P++ TY L+ GLC+ R +A LL +M P +TF LI+ K
Sbjct: 212 NQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKV 271
Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
G+L A +L + M P+ TY +LI+GLC+ G LD+A + M + C PNEV Y
Sbjct: 272 GKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIY 331
Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
T+I+G K R DG ++ M ++ N Y+ LI G G+ + A +++ QM
Sbjct: 332 TTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
+ P+ Y+ L+DGLC GK ++A I M N TY+ +++G + GK
Sbjct: 392 RRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVED 451
Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
A +++ + N + Y+ +I G C G + EA ++ +M G P+ Y
Sbjct: 452 AFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 153/557 (27%), Positives = 272/557 (48%), Gaps = 42/557 (7%)
Query: 69 IFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAY 128
+F+S + Y ++ +++ + + + ++ +R ++ E + + K Y
Sbjct: 29 LFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTY 88
Query: 129 GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNI 188
GK + ++A+ +F M + F C+ ++S+N++LN ++ + + + + A +
Sbjct: 89 GKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA---GV 145
Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
PN T+N++IK C+ + A M +PD+++Y T+++ L K +LD+A+
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205
Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVD---------------NMFLKG- 292
L DEM G P +N+LI+G K + A +L D N+ + G
Sbjct: 206 LFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGL 265
Query: 293 --------CLP-------NE-----VTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
CL NE TY++LIHGLC GN+DKA S+ + + K +
Sbjct: 266 SKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDV 325
Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
VTY T++ G + G+ + + ME + VN Y+ LI GL + GK ++A +W+
Sbjct: 326 VTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRL 384
Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
M KG + Y I GLC G ++A ++ E+ ++G + + Y+S++ + +
Sbjct: 385 MPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKR 444
Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
+A + K+M+K+ N + LI GL D +L EA +M GC+P VV+Y+
Sbjct: 445 LEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNI 504
Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
+I GLC AG EA EM LE +PD+ TY+ILL LC+ I +++L + +
Sbjct: 505 LICGLCKAGKFGEASAFVKEM--LENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQ 562
Query: 573 RGCDPDLVTCNIFLTAL 589
G + D++ NI + L
Sbjct: 563 SGLETDVMMHNILIHGL 579
Score = 216 bits (550), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 156/612 (25%), Positives = 285/612 (46%), Gaps = 56/612 (9%)
Query: 22 MKTLSLTTIPSE------RSHRFFSVRSAVSSNKQME---TEPQGNAKSEQPFSD-EIFN 71
+KT ++P + R F A+ S + E + K E F+ E
Sbjct: 85 IKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAG 144
Query: 72 STPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKA 131
P L +Y + LI+ +F+ L M +E S+ + KA
Sbjct: 145 VAPNLQTYNV-------LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKA 197
Query: 132 HLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPN 191
+++A+ LF M E V +N +++ ++E + A+E ++ ++ + ++ PN
Sbjct: 198 GKLDDALELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL--EDSSVYPN 254
Query: 192 TLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLD 251
T N++I + + G VD+ ++++ M E D+YTY +L+ GLC +D+A + +
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314
Query: 252 EMQ-----VD--------GCF---------------------PTPVTFNVLINGLCKNGE 277
E+ +D G F V++N+LI GL +NG+
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGK 374
Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
+ A + M KG ++ TY IHGLC+ G ++KA+ ++ + +S + Y +
Sbjct: 375 IDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYAS 434
Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
II+ L K R + + ++ M + +N ++ + LI GL ++ + +A ++M + G
Sbjct: 435 IIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNG 494
Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
C+P V Y+ LI GLC+ GK EA + EM+ NG + TYS L+ G K A+
Sbjct: 495 CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554
Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
E+W ++ + + +++LIHGLC GKL +A V M R C ++V Y++++ G
Sbjct: 555 ELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
G A ++ M + QPD+ +YN ++ LC +S++++ + + G P
Sbjct: 615 FKVGDSNRATVIWGYM--YKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFP 672
Query: 578 DLVTCNIFLTAL 589
+ T NI + A+
Sbjct: 673 TVYTWNILVRAV 684
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/475 (29%), Positives = 230/475 (48%), Gaps = 21/475 (4%)
Query: 198 VIKTVCRLGLVDNAIQLFREM-PVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
VIKT + + D A+ +F+ M + CEP I +Y TL++ + + + L +
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 257 GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKA 316
G P T+NVLI CK E +A +D M+ +G P+ +Y+T+I+ L G LD A
Sbjct: 144 GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDA 203
Query: 317 VSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM-EERKFHVNEYIYSTLIS 375
+ L D M P+ Y +I+G +K + + E+ + N ++ +IS
Sbjct: 204 LELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMIS 263
Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
GL K G+ +D +K+W++M + + + YS+LI GLC G D+AE + E+ +
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
+ TY++++ GF GK +++E+W+ M N V N V Y++LI GL E+GK+ EA M+W
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIW 382
Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
M ++G D Y IHGLC G V +AL + E+ DV+ Y +++ LC
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE--SSGGHLDVYAYASIIDCLC 440
Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNE---------- 605
K+ + + +L+ M G + + CN + L + + FL E
Sbjct: 441 KKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGE-ASFFLREMGKNGCRPTV 499
Query: 606 -----LAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
L L K + V+ ML+ P T+ ++ LCR ++I A+
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLAL 554
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 204/412 (49%), Gaps = 5/412 (1%)
Query: 108 RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE 167
RM++ +R ++ + A V++A +F+ + DE V ++N++L +
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNEL-DERKASIDVVTYNTMLGGFCRC 338
Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
G +LE + + + +NI+ ++N++IK + G +D A ++R MP + D
Sbjct: 339 GKIKESLELWRIMEHKNSVNIV----SYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 228 YTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDN 287
TY + GLC +++A+ ++ E++ G + +I+ LCK L A+ LV
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 288 MFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGR 347
M G N N LI GL L +A L M + C P V+Y +I GL K G+
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 348 AVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSA 407
+ + + M E + + YS L+ GL ++ K + A++LW Q ++ G + + ++++
Sbjct: 515 FGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNI 574
Query: 408 LIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNN 467
LI GLC VGK D+A ++ M + C AN TY++LM+GFF+ G ++A IW M K
Sbjct: 575 LIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMG 634
Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCN 519
+ + Y+ ++ GLC + A + + G P V ++ ++ + N
Sbjct: 635 LQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVVN 686
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 247/498 (49%), Gaps = 29/498 (5%)
Query: 158 NSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFRE 217
N +L +++ + + E ++ + + P+ F I C+ G V+ A++LF +
Sbjct: 243 NILLTSLVRANEFQKCCEAFDVVCKG----VSPDVYLFTTAINAFCKGGKVEEAVKLFSK 298
Query: 218 MPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGE 277
M P++ T+ T++DGL R DEA + ++M G PT +T+++L+ GL +
Sbjct: 299 MEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKR 358
Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
+G A ++ M KG PN + YN LI G+L+KA+ + D MV+ TY T
Sbjct: 359 IGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNT 418
Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
+I G K G+A + R+L M F+VN+ ++++I L + A++ +M+ +
Sbjct: 419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 478
Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
P + + LI GLC+ GK +A E+ F+ +N G + T ++L+ G E+GK +A
Sbjct: 479 MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAF 538
Query: 458 EIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGL 517
I K++ CV + V Y+ LI G C KL EA M +M+ RG KPD YS +I GL
Sbjct: 539 RIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGL 598
Query: 518 CNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDP 577
N VEEA++ +++ C PDV+TY+++++ CK + + MM + P
Sbjct: 599 FNMNKVEEAIQFWDD--CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQP 656
Query: 578 DLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQ-RTSGGFKIVEVMLQKFLSPQTS 636
+ V N IR + R R S ++ E M K +SP ++
Sbjct: 657 NTVVYNHL----------------------IRAYCRSGRLSMALELREDMKHKGISPNSA 694
Query: 637 TWERVVQELCRPKRIQAA 654
T+ +++ + R++ A
Sbjct: 695 TYTSLIKGMSIISRVEEA 712
Score = 205 bits (522), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 129/455 (28%), Positives = 231/455 (50%), Gaps = 9/455 (1%)
Query: 157 FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFR 216
+N++++ I+ G ++A+E + +V +K +++ +T +N +IK C+ G DNA +L +
Sbjct: 381 YNNLIDSFIEAGSLNKAIEIKDLMV-SKGLSLTSST--YNTLIKGYCKNGQADNAERLLK 437
Query: 217 EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNG 276
EM + ++ +++ LC D A+ + EM + P LI+GLCK+G
Sbjct: 438 EMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHG 497
Query: 277 ELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYG 336
+ +A +L KG + + T N L+HGLC G LD+A + ++ C+ + V+Y
Sbjct: 498 KHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYN 557
Query: 337 TIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEK 396
T+I+G + + L M +R + Y YS LI GLF K E+A++ W
Sbjct: 558 TLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN 617
Query: 397 GCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA 456
G P+ YS +IDG C+ + +E +E EM++ N Y+ L++ + SG+ A
Sbjct: 618 GMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMA 677
Query: 457 VEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
+E+ +DM N Y+ LI G+ ++ EA++++ +M G +P+V Y+++I G
Sbjct: 678 LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 737
Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
G + + L EM P+ TY +++ + N++ + LLN M ++G
Sbjct: 738 YGKLGQMVKVECLLREMH--SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIV 795
Query: 577 PDLVTCNIFLTALKEK---LEAPQDGTDFLNELAI 608
PD +T F+ ++ LEA + G+D N AI
Sbjct: 796 PDSITYKEFIYGYLKQGGVLEAFK-GSDEENYAAI 829
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 224/459 (48%), Gaps = 6/459 (1%)
Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHI 180
F A+ K VEEA++LF M +E V +FN+V++ + G Y A F +
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKM 334
Query: 181 VNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKE 240
V + P +T+++++K + R + +A + +EM + P++ Y L+D +
Sbjct: 335 V---ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEA 391
Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
L++A+ + D M G T T+N LI G CKNG+ A +L+ M G N+ ++
Sbjct: 392 GSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSF 451
Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
++I LC D A+ + M+ P T+I+GL K G+ +
Sbjct: 452 TSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLN 511
Query: 361 RKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE 420
+ F V+ + L+ GL + GK ++A ++ K+++ +GC + V Y+ LI G C K DE
Sbjct: 512 KGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDE 571
Query: 421 AEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIH 480
A L EM+ G + +TYS L+ G F K +A++ W D +N + + YSV+I
Sbjct: 572 AFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMID 631
Query: 481 GLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS 540
G C+ + E + + +M+S+ +P+ V Y+ +I C +G + AL+L +M
Sbjct: 632 GCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM--KHKGI 689
Query: 541 QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDL 579
P+ TY L+ + S + + L M G +P++
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 728
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 197/410 (48%), Gaps = 6/410 (1%)
Query: 124 IFKAYGKAHLVEEAIRLFHTMVD-EFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVN 182
+ K Y K + A RL M+ F+ + SF SV+ ++ ++ AL F ++
Sbjct: 419 LIKGYCKNGQADNAERLLKEMLSIGFNVNQG--SFTSVICLLCSHLMFDSALRFVGEML- 475
Query: 183 AKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENR 242
N+ P +I +C+ G A++L+ + + D T L+ GLC+ +
Sbjct: 476 --LRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 533
Query: 243 LDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
LDEA + E+ GC V++N LI+G C +L A +D M +G P+ TY+
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSI 593
Query: 303 LIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERK 362
LI GL +++A+ D + +P+ TY +I+G K R +G M +
Sbjct: 594 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 653
Query: 363 FHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
N +Y+ LI + G+ A++L + M KG PN+ Y++LI G+ + + +EA+
Sbjct: 654 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 713
Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
+ EM G N F Y++L+ G+ + G+ K + ++M N N++ Y+V+I G
Sbjct: 714 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 773
Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
DG + EA + +M +G PD + Y I+G G V EA K +E
Sbjct: 774 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Score = 37.0 bits (84), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 76/196 (38%), Gaps = 21/196 (10%)
Query: 63 QPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFI 122
Q F DE+ + + Q + LI+ Y SG + M+ + ++
Sbjct: 643 QEFFDEMMSK-----NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697
Query: 123 FIFKAYGKAHLVEEAIRLFHTMVDE------FHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
+ K VEEA LF M E FH + + + ++ E L
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE---- 753
Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
+++K N+ PN +T+ ++I R G V A +L EM + PD TY + G
Sbjct: 754 ----MHSK--NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG 807
Query: 237 LCKENRLDEAVLLLDE 252
K+ + EA DE
Sbjct: 808 YLKQGGVLEAFKGSDE 823
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 233 bits (594), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 134/444 (30%), Positives = 235/444 (52%), Gaps = 9/444 (2%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+EE I LF M+ V F+ VL+ I + Y + ++H+ + I +
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIV-DFSKVLSKIAKSKNYDLVISLFHHM---EVCGIGHDLY 105
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
++N+VI +CR A+ + +M EPD+ T +L++G C+ NR+ +A+ L+ +M
Sbjct: 106 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM 165
Query: 254 QVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNL 313
+ G P V +N +I+G CK G + A +L D M G + VTYN+L+ GLC G
Sbjct: 166 EEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRW 225
Query: 314 DKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTL 373
A L+ MV +PN +T+ +I+ VK G+ + ++ M R + + Y++L
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 374 ISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGC 433
I+GL G+ ++A ++ M+ KGC P+ V Y+ LI+G C+ + DE ++ EM G
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 434 AANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARM 493
+ TY+++++G+F++G+ A EI+ M N YS+L++GLC + ++ +A +
Sbjct: 346 VGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP---NIRTYSILLYGLCMNWRVEKALV 402
Query: 494 VWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNA 553
++ M + D+ Y+ +IHG+C G+VE+A LF + C K PDV +Y +++
Sbjct: 403 LFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK--PDVVSYTTMISG 460
Query: 554 LCKQSNISHSIDLLNSMMDRGCDP 577
C++ S L M + G P
Sbjct: 461 FCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 229 bits (585), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/415 (32%), Positives = 229/415 (55%), Gaps = 7/415 (1%)
Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
LP+ + F+ V+ + + D I LF M V D+Y+Y +++ LC+ +R A+
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
++ +M G P VT + LING C+ + A LV M G P+ V YNT+I G C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
G ++ AV L DRM + VTY +++ GL GR D AR++ M R N
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
++ +I KEGK +AMKL+++M + P+ Y++LI+GLC G+ DEA+++L M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
+ GC + TY++L+ GF +S + + +++++MA+ V + + Y+ +I G + G+
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
A+ ++++M SR P++ YS +++GLC VE+AL LF M + + + D+ TYN
Sbjct: 366 DAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENM--QKSEIELDITTYN 420
Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFL 603
I+++ +CK N+ + DL S+ +G PD+V+ ++ K + D +D L
Sbjct: 421 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ--WDKSDLL 473
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 128/283 (45%), Gaps = 23/283 (8%)
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
+S ++S + K + + L+ M G + Y+ +I+ LCR + A ++ +M+
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
G + T SSL+ GF + + A+++ M + + V Y+ +I G C+ G +
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
+A ++ +M G + D V Y+S++ GLC +G +A +L +M+ + P+V T+
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDI--VPNVITFTA 249
Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
+++ K+ S ++ L M R DPD+ T N + L
Sbjct: 250 VIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL-------------------- 289
Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQ 652
R +++++M+ K P T+ ++ C+ KR+
Sbjct: 290 -CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 163/578 (28%), Positives = 260/578 (44%), Gaps = 76/578 (13%)
Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV------- 202
C + K FNS+++ G + A + +V HM P + +N++I ++
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM---PGYVVYNILIGSICGDKDSL 424
Query: 203 ----------------------------------CRLGLVDNAIQLFREMPVRNCEPDIY 228
C G + A + REM + PD
Sbjct: 425 NCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTS 484
Query: 229 TYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM 288
TY +++ LC ++++ A LL +EM+ G T+ ++++ CK G + +A K + M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 289 FLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRA 348
GC PN VTY LIH + A L + M++ C+PN VTY +I+G K G+
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 349 VDGARVLMSM----------------EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
++ M ++ N Y L+ G K + E+A KL
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
M +GC+PN +VY ALIDGLC+VGK DEA+E+ EM +G A +TYSSL+ +F+ +
Sbjct: 665 MSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKR 724
Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
A ++ M +N+C N V Y+ +I GLC+ GK EA + M +GC+P+VV Y++
Sbjct: 725 QDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
MI G G +E L+L M P+ TY +L++ CK + + +LL M
Sbjct: 785 MIDGFGMIGKIETCLELLERM--GSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQ 842
Query: 573 R-------GCDPDLVTCNI-FLTALKEKLEAPQDGT-DFLNE---LAIRLFKRQRTSGGF 620
G + N F+ +L E QD T FL+ L L K QR
Sbjct: 843 THWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMAL 902
Query: 621 KIVE--VMLQKFLSPQTSTWERVVQELCRPKRIQAAIN 656
+++E L +ST+ +++ LC +++ A
Sbjct: 903 RLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 136/494 (27%), Positives = 224/494 (45%), Gaps = 53/494 (10%)
Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
E+A + M+ + T +++ VLN + A + + K ++ + T
Sbjct: 465 EKAFSVIREMIGQGFIPDT-STYSKVLNYLCNASKMELAFLLFEEM---KRGGLVADVYT 520
Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
+ +++ + C+ GL++ A + F EM C P++ TY L+ K ++ A L + M
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVD-----------NMFLKGC-----LPNEV 298
+GC P VT++ LI+G CK G++ +A ++ + +M+ K PN V
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
TY L+ G C +++A LLD M C PN++ Y +I+GL K+G+ + V M
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
E F Y YS+LI FK + + A K+ +M+E C PN V+Y+ +IDGLC+VGK
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKT 760
Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
DEA +++ M GC N TY++++ GF GK +E+ + M N V Y VL
Sbjct: 761 DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG---------------------- 516
I C++G L A + +M Y +I G
Sbjct: 821 IDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAP 880
Query: 517 -----------LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
L A +E AL+L E+ TYN L+ +LC + + +
Sbjct: 881 FLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940
Query: 566 LLNSMMDRGCDPDL 579
L + M +G P++
Sbjct: 941 LFSEMTKKGVIPEM 954
Score = 208 bits (530), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/570 (25%), Positives = 261/570 (45%), Gaps = 77/570 (13%)
Query: 157 FNSVLNVIIQE----GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
F LNV++++ G + ALE + K P+ T+N +I+ + +D+A
Sbjct: 199 FGEFLNVLVRKHCRNGSFSIALE---ELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSAS 255
Query: 213 QLFREMPVRN---------------CE-----------------PDIYTYCTLMDGLCKE 240
+ REM + N C+ PD Y L+ GLC+
Sbjct: 256 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEA 315
Query: 241 NRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTY 300
+ +EA+ L+ M+ C P VT++ L+ G +LGR ++++ M ++GC P+ +
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 301 NTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEE 360
N+L+H C G+ A LL +MV MP V Y +I + +++ L+ + E
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD--LLDLAE 433
Query: 361 RKFH--------VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
+ + +N+ S+ L GK E A + ++M+ +G P+T YS +++ L
Sbjct: 434 KAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL 493
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
C K + A + EM G A+ +TY+ ++ F ++G +A + + +M + C N
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNV 553
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
V Y+ LIH + K+ A ++ MLS GC P++V YS++I G C AG VE+A ++F
Sbjct: 554 VTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 533 MLCL--------------EPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
M + +P+V TY LL+ CK + + LL++M GC+P+
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 579 LVTCNIFLTALKE--KLEAPQDGTDFLNE------------LAIRLFKRQRTSGGFKIVE 624
+ + + L + KL+ Q+ ++E L R FK +R K++
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 625 VMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
ML+ +P + ++ LC+ + A
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEA 763
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 136/560 (24%), Positives = 231/560 (41%), Gaps = 111/560 (19%)
Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
N +P+T+ + +I +C L + A+ M +C P++ TY TL+ G + +L
Sbjct: 297 NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRC 356
Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
+L+ M ++GC+P+P FN L++ C +G+ A KL+ M G +P V YN LI
Sbjct: 357 KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGS 416
Query: 307 -----------------------------------------LCLKGNLDKAVSLLDRMVA 325
LC G +KA S++ M+
Sbjct: 417 ICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIG 476
Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
+P+ TY ++N L + + M+ + Y Y+ ++ K G E
Sbjct: 477 QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQ 536
Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
A K + +M E GC PN V Y+ALI + K A E+ M++ GC N TYS+L+
Sbjct: 537 ARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALID 596
Query: 446 GFFESGKGHKAVEIWKDMAKNNCV----------------YNEVCYSVLIHGLCEDGKLR 489
G ++G+ KA +I++ M + V N V Y L+ G C+ ++
Sbjct: 597 GHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVE 656
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML--------------- 534
EAR + M GC+P+ + Y ++I GLC G ++EA ++ EM
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 535 ------------------CLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
LE P+V Y +++ LCK + L+ M ++GC
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776
Query: 577 PDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTS 636
P++VT + DG + ++ L +++E M K ++P
Sbjct: 777 PNVVTYTAMI-----------DGFGMIGKIETCL----------ELLERMGSKGVAPNYV 815
Query: 637 TWERVVQELCRPKRIQAAIN 656
T+ ++ C+ + A N
Sbjct: 816 TYRVLIDHCCKNGALDVAHN 835
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/512 (27%), Positives = 254/512 (49%), Gaps = 27/512 (5%)
Query: 76 LGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYR-MRREKRVVLEKSFIFIFKAYGKAHLV 134
+G + D++ YS + +Y + L +L+ M+R V ++ + ++ KA L+
Sbjct: 475 IGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLI 534
Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
E+A + F+ M E C V ++ ++++ ++ A E + +++ LPN +T
Sbjct: 535 EQARKWFNEM-REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE---GCLPNIVT 590
Query: 195 FNLVIKTVCRLGLVDNAIQLFREM----PVRNCE------------PDIYTYCTLMDGLC 238
++ +I C+ G V+ A Q+F M V + + P++ TY L+DG C
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFC 650
Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
K +R++EA LLD M ++GC P + ++ LI+GLCK G+L A ++ M G
Sbjct: 651 KSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLY 710
Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
TY++LI D A +L +M+ + C PN V Y +I+GL K+G+ + +++ M
Sbjct: 711 TYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
EE+ N Y+ +I G GK E ++L ++M KG PN V Y LID C+ G
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
D A +L EM + Y +++GF + + +++ + ++ +++ Y +L
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRLL 888
Query: 479 IHGLCEDGKLREARMVWTQM--LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCL 536
I L + +L A + ++ S Y+S+I LC A VE A +LF+EM
Sbjct: 889 IDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM--T 946
Query: 537 EPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
+ P++ ++ L+ L + S IS ++ LL+
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 143/519 (27%), Positives = 240/519 (46%), Gaps = 37/519 (7%)
Query: 151 KRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDN 210
K T +N+++++I+++ EF I + + L N++++ CR G
Sbjct: 162 KHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDK-EVFGEFL--NVLVRKHCRNGSFSI 218
Query: 211 AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLIN 270
A++ + P TY L+ K +RLD A L+ EM + T
Sbjct: 219 ALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAY 278
Query: 271 GLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMP 330
LCK G+ A LV+ + +P+ V Y LI GLC ++A+ L+RM A+ C+P
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335
Query: 331 NEVTYGTIINGLV---KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAM 387
N VTY T++ G + +LGR RVL M + + I+++L+ G A
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRC---KRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAY 392
Query: 388 KLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDE--------AEEILFEMINNGCAANAFT 439
KL K+M++ G P VVY+ LI +C G D AE+ EM+ G N
Sbjct: 393 KLLKKMVKCGHMPGYVVYNILIGSIC--GDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450
Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
SS + +GK KA + ++M + + YS +++ LC K+ A +++ +M
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510
Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
G DV Y+ M+ C AG +E+A K FNEM E P+V TY L++A K
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM--REVGCTPNVVTYTALIHAYLKAKK 568
Query: 560 ISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
+S++ +L +M+ GC P++VT + + +A Q E A ++F+R S
Sbjct: 569 VSYANELFETMLSEGCLPNIVTYSALIDG---HCKAGQ------VEKACQIFERMCGSKD 619
Query: 620 FKIVEVMLQKFLS----PQTSTWERVVQELCRPKRIQAA 654
V++ +++ P T+ ++ C+ R++ A
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 205/388 (52%), Gaps = 2/388 (0%)
Query: 191 NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLL 250
N ++N+VI VC+LG + A L M ++ PD+ +Y T+++G C+ LD+ L+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 251 DEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLK 310
+ M+ G P + +I LC+ +L A + M +G LP+ V Y TLI G C +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 311 GNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIY 370
G++ A M + P+ +TY II+G ++G V+ ++ M + + +
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 371 STLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
+ LI+G K G +DA ++ M++ GC PN V Y+ LIDGLC+ G D A E+L EM
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLRE 490
G N FTY+S++ G +SG +AV++ + + V Y+ L+ C+ G++ +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 491 ARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNIL 550
A+ + +ML +G +P +V ++ +++G C G +E+ KL N ML P+ T+N L
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLA--KGIAPNATTFNSL 602
Query: 551 LNALCKQSNISHSIDLLNSMMDRGCDPD 578
+ C ++N+ + + M RG PD
Sbjct: 603 VKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Score = 212 bits (540), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 218/453 (48%), Gaps = 6/453 (1%)
Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
V S+++V+N + G + + I K + PN+ + +I +CR+ + A +
Sbjct: 281 VISYSTVVNGYCRFGELDKV---WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEE 337
Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
F EM + PD Y TL+DG CK + A EM P +T+ +I+G C
Sbjct: 338 AFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
+ G++ A KL MF KG P+ VT+ LI+G C G++ A + + M+ + C PN V
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
TY T+I+GL K G +L M + N + Y+++++GL K G E+A+KL +
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
G +TV Y+ L+D C+ G+ D+A+EIL EM+ G T++ LM GF G
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
++ M N ++ L+ C L+ A ++ M SRG PD Y ++
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENL 637
Query: 514 IHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDR 573
+ G C A +++EA LF EM V TY++L+ K+ + ++ + M
Sbjct: 638 VKGHCKARNMKEAWFLFQEM--KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 574 GCDPDLVTCNIFLTALKEKLEAPQDGTDFLNEL 606
G D + F + K K + P D ++E+
Sbjct: 696 GLAADKEIFD-FFSDTKYKGKRPDTIVDPIDEI 727
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/509 (27%), Positives = 243/509 (47%), Gaps = 21/509 (4%)
Query: 104 MVLYRMRREKRVVLEKSF------------IFIFKAYGKAHLVEEAIRLFHTMVDEFHCK 151
+V + + RE R V EK +++ + + AI +F + C
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVC- 243
Query: 152 RTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNA 211
V S+N V++ + Q G R E ++ ++ + P+ ++++ V+ CR G +D
Sbjct: 244 WNVASYNIVIHFVCQLG---RIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKV 300
Query: 212 IQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLING 271
+L M + +P+ Y Y +++ LC+ +L EA EM G P V + LI+G
Sbjct: 301 WKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDG 360
Query: 272 LCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPN 331
CK G++ A+K M + P+ +TY +I G C G++ +A L M P+
Sbjct: 361 FCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420
Query: 332 EVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWK 391
VT+ +ING K G D RV M + N Y+TLI GL KEG + A +L
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480
Query: 392 QMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
+M + G +PN Y+++++GLC+ G +EA +++ E G A+ TY++LM + +SG
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSG 540
Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
+ KA EI K+M V ++VL++G C G L + + ML++G P+ ++
Sbjct: 541 EMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFN 600
Query: 512 SMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMM 571
S++ C +++ A ++ +M PD TY L+ CK N+ + L M
Sbjct: 601 SLVKQYCIRNNLKAATAIYKDM--CSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Query: 572 DRGCDPDLVTCNIFLTAL---KEKLEAPQ 597
+G + T ++ + K+ LEA +
Sbjct: 659 GKGFSVSVSTYSVLIKGFLKRKKFLEARE 687
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 168/347 (48%), Gaps = 4/347 (1%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
T+ ++I + GD + + M + +F + Y KA +++A R+ + M
Sbjct: 388 TYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
+ + C V ++ ++++ + +EG A E + + + + PN T+N ++ +C+
Sbjct: 448 I-QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK---IGLQPNIFTYNSIVNGLCK 503
Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
G ++ A++L E D TY TLMD CK +D+A +L EM G PT VT
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
FNVL+NG C +G L KL++ M KG PN T+N+L+ C++ NL A ++ M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
+ P+ TY ++ G K + + M+ + F V+ YS LI G K K
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
+A +++ QM +G + ++ D + +PD + + E+I N
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 171/397 (43%), Gaps = 63/397 (15%)
Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGL---CLKGNLDKAVS 318
P F+V L G L A ++ + M G + + + N + L C K A+
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTA--TAII 232
Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
+ N +Y +I+ + +LGR + +L+ ME + + + YST+++G
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292
Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
+ G+ + KL + M KG KPN+ +Y ++I LCR+ K EAE
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE---------------- 336
Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
E + +M + + + V Y+ LI G C+ G +R A + +M
Sbjct: 337 -------------------EAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEM 377
Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
SR PDV+ Y+++I G C G + EA KLF+EM C +PD T+ L+N CK
Sbjct: 378 HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC--KGLEPDSVTFTELINGYCKAG 435
Query: 559 NISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSG 618
++ + + N M+ GC P++VT + L + D NEL ++K
Sbjct: 436 HMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL-----CKEGDLDSANELLHEMWKIG---- 486
Query: 619 GFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
L P T+ +V LC+ I+ A+
Sbjct: 487 ------------LQPNIFTYNSIVNGLCKSGNIEEAV 511
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 224/430 (52%), Gaps = 13/430 (3%)
Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
TV ++ S++ +G ++AL Y+ + I P+ TF ++ + R GL+ +A+
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGK---GIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
+LF EM N +P+ TY +++G C+E + +A L EM G P ++ LI+GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
C G+ A VD + C NE+ Y L+HG C +G L++A+S+ MV +
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDL 647
Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
V YG +I+G +K +L M +R ++ IY+++I K G ++A +W
Sbjct: 648 VCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDL 707
Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS----LMKGFF 448
M+ +GC PN V Y+A+I+GLC+ G +EAE + +M N TY L KG
Sbjct: 708 MINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEV 767
Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
+ KAVE+ + K + N Y++LI G C G++ EA + T+M+ G PD +
Sbjct: 768 DM---QKAVELHNAILKG-LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
Y++MI+ LC V++A++L+N M E +PD YN L++ C + + +L N
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMT--EKGIRPDRVAYNTLIHGCCVAGEMGKATELRN 881
Query: 569 SMMDRGCDPD 578
M+ +G P+
Sbjct: 882 EMLRQGLIPN 891
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 250/517 (48%), Gaps = 13/517 (2%)
Query: 70 FNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYG 129
F +P L Y +LI F E++ RM + + ++ + +
Sbjct: 361 FGVSPNLFVYN-------ALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC 413
Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
+ ++ A+ MVD K +V +NS++N + G A F ++N K +
Sbjct: 414 RRGKLDTALSFLGEMVDT-GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK---LE 469
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
P +T+ ++ C G ++ A++L+ EM + P IYT+ TL+ GL + + +AV L
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKL 529
Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
+EM P VT+NV+I G C+ G++ +A + + M KG +P+ +Y LIHGLCL
Sbjct: 530 FNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCL 589
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
G +A +D + C NE+ Y +++G + G+ + V M +R ++
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVC 649
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
Y LI G K + L K+M ++G KP+ V+Y+++ID + G EA I MI
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
N GC N TY++++ G ++G ++A + M + V N+V Y + L +
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
+ + + +G + Y+ +I G C G +EEA +L M+ PD TY
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI--GDGVSPDCITYTT 827
Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
++N LC+++++ +I+L NSM ++G PD V N +
Sbjct: 828 MINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/522 (28%), Positives = 241/522 (46%), Gaps = 52/522 (9%)
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
P+ + +++ + + G ++ A+ L + + P+++ Y L+D LCK + EA LL
Sbjct: 330 PSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELL 389
Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
D M G P VT+++LI+ C+ G+L A + M G + YN+LI+G C
Sbjct: 390 FDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCK 449
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
G++ A + M+ K P VTY +++ G G+ R+ M + + Y
Sbjct: 450 FGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYT 509
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
++TL+SGLF+ G DA+KL+ +M E KPN V Y+ +I+G C G +A E L EM
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
G + ++Y L+ G +G+ +A + K NC NE+CY+ L+HG C +GKL
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 490 EARMVWTQMLSRGC-----------------------------------KPDVVAYSSMI 514
EA V +M+ RG KPD V Y+SMI
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 515 HGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
G +EA +++ M + P+ TY ++N LCK ++ + L + M
Sbjct: 690 DAKSKTGDFKEAFGIWDLM--INEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 575 CDPDLVTCNIFLTALKEKLEAPQDGTDFLN-------------ELAIRLFKRQ-RTSGGF 620
P+ VT FL L + Q + N + IR F RQ R
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKCWSNL 662
+++ M+ +SP T+ ++ ELCR ++ AI + W+++
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAI-ELWNSM 848
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 226/488 (46%), Gaps = 48/488 (9%)
Query: 56 QGNAKSEQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRV 115
+G + F E+ ++ KL Y + SLI + GD + E + M +K
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYP-----YNSLINGHCKFGDISAAEGFMAEMINKKLE 469
Query: 116 VLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALE 175
++ + Y + +A+RL+H M + ++ +F ++L+ + + GL A++
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
+N + N+ PN +T+N++I+ C G + A + +EM + PD Y+Y L+
Sbjct: 529 LFNEMA---EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 236 GLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAK------------ 283
GLC + EA + +D + C + + L++G C+ G+L A
Sbjct: 586 GLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 284 -----------------------LVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
L+ M +G P++V Y ++I G+ +A +
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYSTLISGLFK 379
D M+ C+PNEVTY +INGL K G V+ A VL S M+ N+ Y + L K
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAG-FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 380 -EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
E + A++L ++ KG NT Y+ LI G CR G+ +EA E++ MI +G + +
Sbjct: 765 GEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCI 823
Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
TY++++ KA+E+W M + + V Y+ LIHG C G++ +A + +M
Sbjct: 824 TYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Query: 499 LSRGCKPD 506
L +G P+
Sbjct: 884 LRQGLIPN 891
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 109/221 (49%), Gaps = 6/221 (2%)
Query: 83 DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
D + S+I + +GDFK + M E V E ++ + KA V EA L
Sbjct: 682 DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCS 741
Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQ-EGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
M V ++ L+++ + E +A+E +N I+ +L NT T+N++I+
Sbjct: 742 KMQPVSSVPNQV-TYGCFLDILTKGEVDMQKAVELHNAILKG----LLANTATYNMLIRG 796
Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
CR G ++ A +L M PD TY T+++ LC+ N + +A+ L + M G P
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNT 302
V +N LI+G C GE+G+A +L + M +G +PN T T
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 95.1 bits (235), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 112/238 (47%), Gaps = 43/238 (18%)
Query: 139 RLFHTMVDEFHCKRTVKS----FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
+LF ++ E H R +K + S+++ + G + A ++ ++N +PN +T
Sbjct: 664 KLFFGLLKEMH-DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE---GCVPNEVT 719
Query: 195 FNLVIKTVCRLGLVDNAIQLFREM-PVRN--------CEPDIYT---------------- 229
+ VI +C+ G V+ A L +M PV + C DI T
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 230 ----------YCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG 279
Y L+ G C++ R++EA L+ M DG P +T+ +IN LC+ ++
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 280 RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
+A +L ++M KG P+ V YNTLIHG C+ G + KA L + M+ +PN T T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>sp|Q9SAJ5|PP133_ARATH Pentatricopeptide repeat-containing protein At1g79540
OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1
Length = 780
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 126/452 (27%), Positives = 226/452 (50%), Gaps = 38/452 (8%)
Query: 176 FYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMD 235
++ + K + ++ F ++I ++G+ + A++ F M +C PD++TY ++
Sbjct: 111 YWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILR 170
Query: 236 GLCKENRLDE-AVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
+ +E A + +EM C P TF +L++GL K G A K+ D+M +G
Sbjct: 171 VMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS 230
Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
PN VTY LI GLC +G+ D A L M S P+ V + +++G KLGR V+ +
Sbjct: 231 PNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
L E+ F + YS+LI GLF+ + A +L+ M++K KP+ ++Y+ LI GL +
Sbjct: 291 LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350
Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
GK ++A ++L M + G + + + Y++++K G + + +M++ +
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410
Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
+++LI +C +G +REA ++T++ GC P V ++++I GLC +G ++EA L ++M
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470
Query: 535 CLEPK-------------------------------------SQPDVFTYNILLNALCKQ 557
P S PD+ +YN+L+N C+
Sbjct: 471 VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 558 SNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
+I ++ LLN + +G PD VT N + L
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGL 562
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 210/450 (46%), Gaps = 44/450 (9%)
Query: 121 FIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHR-ALEFYNH 179
F + AY K + E+A+ F M EF C+ V ++N +L V+++E ++ A YN
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRM-KEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNE 188
Query: 180 IVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK 239
++ N PN TF +++ + + G +A ++F +M R P+ TY L+ GLC+
Sbjct: 189 MLKC---NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQ 245
Query: 240 ENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVT 299
D+A L EMQ G +P V N L++G CK G + A +L+ G +
Sbjct: 246 RGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRG 305
Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
Y++LI GL +A L M+ P+ + Y +I GL K G+ D ++L SM
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
+ + Y Y+ +I L G E+ L +M E P+ ++ LI +CR G
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKA----------------------- 456
EAEEI E+ +GC+ + T+++L+ G +SG+ +A
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 457 -------------VEIWKDMA---KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
++ ++D+A + V Y+VLI+G C G + A + +
Sbjct: 486 NRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQL 545
Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLF 530
+G PD V Y+++I+GL G EEA KLF
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 152 bits (385), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 210/459 (45%), Gaps = 45/459 (9%)
Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
++ ++S+++ + + Y +A E Y +++ NI P+ + + ++I+ + + G +++A++
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKK---NIKPDIILYTILIQGLSKAGKIEDALK 359
Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
L MP + PD Y Y ++ LC L+E L EM FP T +LI +C
Sbjct: 360 LLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMC 419
Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM----VASKCM 329
+NG + A ++ + GC P+ T+N LI GLC G L +A LL +M AS +
Sbjct: 420 RNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFL 479
Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
+ + +V+ G + R L + + Y+ LI+G + G + A+KL
Sbjct: 480 RLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKL 539
Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
+ KG P++V Y+ LI+GL RVG+ +EA ++ + + + Y SLM
Sbjct: 540 LNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYA--KDDFRHSPAVYRSLMTWSCR 597
Query: 450 SGKGHKAVEIW-KDMAKNNCVYNEVC---------------------------------Y 475
K A +W K + K +C+ +E Y
Sbjct: 598 KRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELTLGPY 657
Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
++ + GLC+ G+ EA MV++ + + + +IHGLC ++ A+++F L
Sbjct: 658 TIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLD 717
Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRG 574
K P V Y LL++L + + + L + M+R
Sbjct: 718 NNFKLMPRVCNY--LLSSLLESTEKMEIVSQLTNRMERA 754
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 145/499 (29%), Positives = 238/499 (47%), Gaps = 7/499 (1%)
Query: 79 YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
+ S +I +S F S ++ Y E + + I +Y ++ + +I
Sbjct: 55 FSHAQSLLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSI 114
Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
F+ MVD + FN +L ++ +++ F+N ++ + +F ++
Sbjct: 115 SYFNEMVDNGFVPGS-NCFNYLLTFVVGSSSFNQWWSFFNE----NKSKVVLDVYSFGIL 169
Query: 199 IKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGC 258
IK C G ++ + L E+ P++ Y TL+DG CK+ +++A L EM G
Sbjct: 170 IKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGL 229
Query: 259 FPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVS 318
T+ VLINGL KNG + ++ + M G PN TYN +++ LC G A
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289
Query: 319 LLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLF 378
+ D M N VTY T+I GL + + + +V+ M+ + N Y+TLI G
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 379 KEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAF 438
GK A+ L + + +G P+ V Y+ L+ G CR G A +++ EM G +
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409
Query: 439 TYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQM 498
TY+ L+ F S KA+++ M + V + YSVLIHG C G++ EA ++ M
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 499 LSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQS 558
+ + C+P+ V Y++MI G C GS ALKL EM E + P+V +Y ++ LCK+
Sbjct: 470 VEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM--EEKELAPNVASYRYMIEVLCKER 527
Query: 559 NISHSIDLLNSMMDRGCDP 577
+ L+ M+D G DP
Sbjct: 528 KSKEAERLVEKMIDSGIDP 546
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/391 (30%), Positives = 206/391 (52%), Gaps = 23/391 (5%)
Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
+F +LI G C+ GE+ ++ L+ + G PN V Y TLI G C KG ++KA L M
Sbjct: 165 SFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM 224
Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
+ NE TY +INGL K G G + M+E N Y Y+ +++ L K+G+
Sbjct: 225 GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRT 284
Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
+DA +++ +M E+G N V Y+ LI GLCR K +EA +++ +M ++G N TY++L
Sbjct: 285 KDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
+ GF GK KA+ + +D+ + V Y++L+ G C G A + +M RG
Sbjct: 345 IDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
KP V Y+ +I + ++E+A++L M E PDV TY++L++ C + ++ +
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSME--ELGLVPDVHTYSVLIHGFCIKGQMNEA 462
Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIV 623
L SM+++ C+P+ V N + L ++G+ + A++L K
Sbjct: 463 SRLFKSMVEKNCEPNEVIYNTMI------LGYCKEGSSY---RALKLLKE---------- 503
Query: 624 EVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
M +K L+P +++ +++ LC+ ++ + A
Sbjct: 504 --MEEKELAPNVASYRYMIEVLCKERKSKEA 532
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 175/356 (49%), Gaps = 24/356 (6%)
Query: 300 YNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSME 359
Y +I+ +L+ ++S + MV + +P + ++ +V + + +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVG-SSSFNQWWSFFNEN 155
Query: 360 ERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPD 419
+ K ++ Y + LI G + G+ E + L ++ E G PN V+Y+ LIDG C+ G+ +
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 420 EAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
+A+++ FEM G AN TY+ L+ G F++G + E+++ M ++ N Y+ ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 480 HGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPK 539
+ LC+DG+ ++A V+ +M RG ++V Y+++I GLC + EA K+ ++M
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK--SDG 333
Query: 540 SQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDG 599
P++ TYN L++ C + ++ L + RG P LVT NI ++
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG----------- 382
Query: 600 TDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
++ TSG K+V+ M ++ + P T+ ++ R ++ AI
Sbjct: 383 ----------FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI 428
Score = 145 bits (367), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 160/345 (46%), Gaps = 74/345 (21%)
Query: 134 VEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTL 193
+E+A LF M + +++ ++N + + G+ + E Y + + + PN
Sbjct: 214 IEKAKDLFFEM-GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM---QEDGVFPNLY 269
Query: 194 TFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T+N V+ +C+ G +A Q+F EM R +I TY TL+ GLC+E +L+EA ++D+M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 254 QVDGC-----------------------------------FPTPVTFNVLINGLCKNGEL 278
+ DG P+ VT+N+L++G C+ G+
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 279 GRAAKLVDNMFLKGCLPNEVTY-----------------------------------NTL 303
AAK+V M +G P++VTY + L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
IHG C+KG +++A L MV C PNEV Y T+I G K G + ++L MEE++
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKEL 509
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSAL 408
N Y +I L KE K+++A +L ++M++ G P+T + S +
Sbjct: 510 APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/290 (19%), Positives = 133/290 (45%), Gaps = 24/290 (8%)
Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
+Y +I+ + ++ + +M++ G P + ++ L+ + ++ F
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWS-FFNE 154
Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
+ + +++ L+KG E+G+ K+ ++ ++ + N V Y+ LI G C+ G++
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
+A+ ++ +M G + Y+ +I+GL G ++ +++ +M E P+++TYN
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ--EDGVFPNLYTYN 272
Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
++N LCK + + + M +RG ++VT N + L +++ LNE
Sbjct: 273 CVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMK--------LNEAN- 323
Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
K+V+ M ++P T+ ++ C ++ A++ C
Sbjct: 324 ------------KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 129/405 (31%), Positives = 214/405 (52%), Gaps = 2/405 (0%)
Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLD 244
H LP+ + F ++ L + I ++M + D+Y++ L+ C+ +RL
Sbjct: 64 HSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLS 123
Query: 245 EAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLI 304
A+ +L +M G P+ VTF L++G C +G A LV M G PN V YNTLI
Sbjct: 124 FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLI 183
Query: 305 HGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFH 364
GLC G L+ A+ LL+ M + VTY T++ GL GR D AR+L M +R +
Sbjct: 184 DGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN 243
Query: 365 VNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEI 424
+ ++ LI K+G ++A +L+K+M++ PN V Y+++I+GLC G+ +A++
Sbjct: 244 PDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKT 303
Query: 425 LFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCE 484
M + GC N TY++L+ GF + + +++++ M+ + Y+ LIHG C+
Sbjct: 304 FDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQ 363
Query: 485 DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDV 544
GKLR A ++ M+SR PD++ + ++HGLC G +E AL F++M E + +
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR--ESEKYIGI 421
Query: 545 FTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
YNI+++ LCK + + +L + G PD T I + L
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Score = 216 bits (551), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 141/442 (31%), Positives = 218/442 (49%), Gaps = 10/442 (2%)
Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
E+A LF MV ++ F +L Y + F + + I + +
Sbjct: 53 EDAFALFFEMVHS-QPLPSIVDFTRLLTATANLRRYETVIYFSQKM---ELYGISHDLYS 108
Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
F ++I CR + A+ + +M EP I T+ +L+ G C NR+ +A L+ M
Sbjct: 109 FTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV 168
Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLD 314
G P V +N LI+GLCKNGEL A +L++ M KG + VTYNTL+ GLC G
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 315 KAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLI 374
A +L M+ P+ VT+ +I+ VK G + + M + N Y+++I
Sbjct: 229 DAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSII 288
Query: 375 SGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCA 434
+GL G+ DA K + M KGC PN V Y+ LI G C+ DE ++ M G
Sbjct: 289 NGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFN 348
Query: 435 ANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMV 494
A+ FTY++L+ G+ + GK A++I+ M + + + +L+HGLC +G++ A +
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 495 WTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS--QPDVFTYNILLN 552
+ M +VAY+ MIHGLC A VE+A +LF C P +PD TY I++
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELF----CRLPVEGVKPDARTYTIMIL 464
Query: 553 ALCKQSNISHSIDLLNSMMDRG 574
LCK + +L+ M + G
Sbjct: 465 GLCKNGPRREADELIRRMKEEG 486
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 183/357 (51%), Gaps = 2/357 (0%)
Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
L G R ++A L EM P+ V F L+ M L G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
+ ++ LIH C L A+S+L +M+ P+ VT+G++++G + R D
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
+++ M + + N +Y+TLI GL K G+ A++L +M +KG + V Y+ L+ GL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
C G+ +A +L +M+ + T+++L+ F + G +A E++K+M +++ N
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
V Y+ +I+GLC G+L +A+ + M S+GC P+VV Y+++I G C V+E +KLF
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341
Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
M C D+FTYN L++ C+ + ++D+ M+ R PD++T I L L
Sbjct: 342 MSC--EGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 159/316 (50%), Gaps = 3/316 (0%)
Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
V +N++++ + + G + ALE N + + + + +T+N ++ +C G +A +
Sbjct: 176 VVVYNTLIDGLCKNGELNIALELLNEM---EKKGLGADVVTYNTLLTGLCYSGRWSDAAR 232
Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
+ R+M R+ PD+ T+ L+D K+ LDEA L EM P VT+N +INGLC
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
+G L A K D M KGC PN VTYNTLI G C +D+ + L RM +
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIF 352
Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
TY T+I+G ++G+ + M R+ + + L+ GL G+ E A+ + M
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
E V Y+ +I GLC+ K ++A E+ + G +A TY+ ++ G ++G
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 454 HKAVEIWKDMAKNNCV 469
+A E+ + M + +
Sbjct: 473 READELIRRMKEEGII 488
Score = 92.8 bits (229), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 125/283 (44%), Gaps = 25/283 (8%)
Query: 373 LISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNG 432
L +G + EDA L+ +M+ P+ V ++ L+ + + + +M G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 433 CAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREAR 492
+ + ++++ L+ F + A+ + M K + V + L+HG C ++ +A
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 493 MVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKS-QPDVFTYNILL 551
+ M+ G +P+VV Y+++I GLC G + AL+L NEM E K DV TYN LL
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM---EKKGLGADVVTYNTLL 218
Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLF 611
LC S + +L MM R +PD+VT TAL + Q D EL
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVT----FTALIDVF-VKQGNLDEAQEL----- 268
Query: 612 KRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
+ M+Q + P T+ ++ LC R+ A
Sbjct: 269 -----------YKEMIQSSVDPNNVTYNSIINGLCMHGRLYDA 300
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/409 (32%), Positives = 217/409 (53%), Gaps = 13/409 (3%)
Query: 79 YQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAI 138
Y S+F ++ ++ FK+ E ++ RM+ E VV E + I + YG+ H +++
Sbjct: 47 YVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSL 106
Query: 139 RLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLV 198
R+FH M D F C + K++ +VL ++++E + A +FY N + + + P + N++
Sbjct: 107 RVFHKMKD-FDCDPSQKAYVTVLAILVEENQLNLAFKFYK---NMREIGLPPTVASLNVL 162
Query: 199 IKTVCR-LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDG 257
IK +CR G VD +++F EMP R C+PD YTY TL+ GLC+ R+DEA L EM
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222
Query: 258 CFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAV 317
C PT VT+ LINGLC + + A + ++ M KG PN TY++L+ GLC G +A+
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAM 282
Query: 318 SLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGL 377
L + M+A C PN VTY T+I GL K + + +L M + + +Y +ISG
Sbjct: 283 ELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGF 342
Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVY-------SALIDGLCRVGKPDEAEEILFEMIN 430
K +A +M+ G PN + + + ++ GLC P A + M +
Sbjct: 343 CAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSMRS 401
Query: 431 NGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLI 479
G + T SL+K + G+ KAV++ ++ + C+ ++ + +LI
Sbjct: 402 RGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 186 bits (473), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 191/374 (51%), Gaps = 17/374 (4%)
Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
+++++F +M +C+P Y T++ L +EN+L+ A M+ G PT + NVLI
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 270 NGLCKN-GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
LC+N G + K+ M +GC P+ TY TLI GLC G +D+A L MV C
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
P VTY ++INGL + R L M+ + N + YS+L+ GL K+G++ AM+
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
L++ MM +GC+PN V Y+ LI GLC+ K EA E+L M G +A Y ++ GF
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFC 343
Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSV-------LIHGLCEDGKLREARMVWTQMLSR 501
K +A +M N + +++ ++ GLC + R A ++ M SR
Sbjct: 344 AISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSR-AFTLYLSMRSR 402
Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML---CLEPKSQPDVFTYNILLNALCKQS 558
G +V S++ LC G ++A++L +E++ C+ K T+ +L+ ++
Sbjct: 403 GISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKG-----TWKLLIGHTLDKT 457
Query: 559 NISHSIDLLNSMMD 572
+ + D L +D
Sbjct: 458 IVGEASDTLLRDLD 471
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 187/384 (48%), Gaps = 24/384 (6%)
Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNM--FLK--- 291
L N+ A L+ M+++ C V+ ++L++ +C+ GR + D++ F K
Sbjct: 61 LVSANKFKAAEDLIVRMKIENCV---VSEDILLS-ICRG--YGRVHRPFDSLRVFHKMKD 114
Query: 292 -GCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVD 350
C P++ Y T++ L + L+ A M P + +I L + VD
Sbjct: 115 FDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVD 174
Query: 351 -GARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALI 409
G ++ + M +R + Y Y TLISGL + G+ ++A KL+ +M+EK C P V Y++LI
Sbjct: 175 AGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
+GLC DEA L EM + G N FTYSSLM G + G+ +A+E+++ M C
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCR 294
Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
N V Y+ LI GLC++ K++EA + +M +G KPD Y +I G C EA
Sbjct: 295 PNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANF 354
Query: 530 FNEMLCLEPKSQPDVFTYNI-------LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTC 582
+EM+ P+ T+NI ++ LC S + L SM RG ++ T
Sbjct: 355 LDEMIL--GGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETL 411
Query: 583 NIFLTALKEKLEAPQDGTDFLNEL 606
+ L +K E Q ++E+
Sbjct: 412 ESLVKCLCKKGEF-QKAVQLVDEI 434
Score = 105 bits (263), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 135/298 (45%), Gaps = 29/298 (9%)
Query: 364 HVNEYI-----YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
+ N Y+ + ++ L K + A L +M + C + + ++ G RV +P
Sbjct: 43 YANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRP 102
Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
++ + +M + C + Y +++ E + + A + +K+M + +VL
Sbjct: 103 FDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVL 162
Query: 479 IHGLCE-DGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLE 537
I LC DG + ++ +M RGC PD Y ++I GLC G ++EA KLF EM +E
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM--VE 220
Query: 538 PKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQ 597
P V TY L+N LC N+ ++ L M +G +P++ T + +
Sbjct: 221 KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLM----------- 269
Query: 598 DGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
DG L K R+ ++ E+M+ + P T+ ++ LC+ ++IQ A+
Sbjct: 270 DG----------LCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 14/206 (6%)
Query: 85 TFYSLIQHYANSG-DFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
T+ SL+ G +++E+ M R R + ++ + K ++EA+ L
Sbjct: 264 TYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM-VTYTTLITGLCKEQKIQEAVELLDR 322
Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT-- 201
M + K + V++ + A F + ++ I PN LT+N+ +KT
Sbjct: 323 M-NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG---GITPNRLTWNIHVKTSN 378
Query: 202 -VCRLGLVDN----AIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVD 256
V R GL N A L+ M R ++ T +L+ LCK+ +AV L+DE+ D
Sbjct: 379 EVVR-GLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTD 437
Query: 257 GCFPTPVTFNVLINGLCKNGELGRAA 282
GC P+ T+ +LI +G A+
Sbjct: 438 GCIPSKGTWKLLIGHTLDKTIVGEAS 463
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/500 (28%), Positives = 248/500 (49%), Gaps = 51/500 (10%)
Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
A++F++++V ++ + N VI R+ D AI L+R+M +R +IY++
Sbjct: 90 AIDFFDYMVRSRP---FYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELG------------- 279
L+ C ++L ++ ++ G P VTFN L++GLC +
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 280 --RAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
A L D M G P +T+NTLI+GLCL+G + +A +L+++MV + VTYGT
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
I+NG+ K+G +L MEE + IYS +I L K+G DA L+ +M+EKG
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 326
Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAV 457
PN Y+ +IDG C G+ +A+ +L +MI + T+++L+ + GK +A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 458 EIWKDMAKNNCVY-NEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
++ +M + C++ + V Y+ +I+G C+ + +A+ ++ M S PDVV ++++I
Sbjct: 387 KLCDEML-HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDV 441
Query: 517 LCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCD 576
C A V+E ++L E+ + TYN L++ C+ N++ + DL M+ G
Sbjct: 442 YCRAKRVDEGMQLLREI--SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 577 PDLVTCNIFLTAL--KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQ 634
PD +TCNI L EKLE A+ LF EV+ +
Sbjct: 500 PDTITCNILLYGFCENEKLEE-----------ALELF------------EVIQMSKIDLD 536
Query: 635 TSTWERVVQELCRPKRIQAA 654
T + ++ +C+ ++ A
Sbjct: 537 TVAYNIIIHGMCKGSKVDEA 556
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/496 (28%), Positives = 242/496 (48%), Gaps = 24/496 (4%)
Query: 106 LYRMRREKRVVLE-KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
LYR +R+ L SF + K + H + ++ F + + + V +FN++L+ +
Sbjct: 128 LYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLT-KLGFQPDVVTFNTLLHGL 186
Query: 165 IQEGLYHRALEFYNHIVNAK------------HMNILPNTLTFNLVIKTVCRLGLVDNAI 212
E AL + ++V + + P +TFN +I +C G V A
Sbjct: 187 CLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246
Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
L +M + D+ TY T+++G+CK A+ LL +M+ P V ++ +I+ L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306
Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
CK+G A L M KG PN TYN +I G C G A LL M+ + P+
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366
Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
+T+ +I+ VK G+ + ++ M R + Y+++I G K + +DA K
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KH 422
Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
M + P+ V ++ +ID CR + DE ++L E+ G AN TY++L+ GF E
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDN 482
Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
+ A +++++M + + + ++L++G CE+ KL EA ++ + D VAY+
Sbjct: 483 LNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNI 542
Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEP--KSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
+IHG+C V+EA LF C P +PDV TYN++++ C +S IS + L + M
Sbjct: 543 IIHGMCKGSKVDEAWDLF----CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 571 MDRGCDPDLVTCNIFL 586
D G +PD T N +
Sbjct: 599 KDNGHEPDNSTYNTLI 614
Score = 209 bits (532), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 228/446 (51%), Gaps = 10/446 (2%)
Query: 136 EAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTF 195
EA+ LF MV E V +FN+++N + EG A N +V K ++I + +T+
Sbjct: 209 EAVALFDQMV-EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMV-GKGLHI--DVVTY 264
Query: 196 NLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQV 255
++ +C++G +A+ L +M + +PD+ Y ++D LCK+ +A L EM
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 256 DGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDK 315
G P T+N +I+G C G A +L+ +M + P+ +T+N LI +G L +
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 316 AVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLIS 375
A L D M+ P+ VTY ++I G K R D + M + ++T+I
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIID 440
Query: 376 GLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAA 435
+ + ++ M+L +++ +G NT Y+ LI G C V + A+++ EMI++G
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500
Query: 436 NAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVW 495
+ T + L+ GF E+ K +A+E+++ + + + V Y+++IHG+C+ K+ EA ++
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 496 TQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALC 555
+ G +PDV Y+ MI G C ++ +A LF++M + +PD TYN L+
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMK--DNGHEPDNSTYNTLIRGCL 618
Query: 556 KQSNISHSIDLLNSMMDRGCDPDLVT 581
K I SI+L++ M G D T
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 186/398 (46%), Gaps = 41/398 (10%)
Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
+ A+ L M +E H K V ++++++ + ++G + A ++ ++ I PN T
Sbjct: 278 KSALNLLSKM-EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK---GIAPNVFT 333
Query: 195 FNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ 254
+N +I C G +A +L R+M R PD+ T+ L+ KE +L EA L DEM
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 255 VDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF------------------------- 289
FP VT+N +I G CK+ A + D M
Sbjct: 394 HRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQ 453
Query: 290 ------LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLV 343
+G + N TYNTLIHG C NL+ A L M++ P+ +T ++ G
Sbjct: 454 LLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 344 KLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTV 403
+ + + + ++ K ++ Y+ +I G+ K K ++A L+ + G +P+
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 404 VYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDM 463
Y+ +I G C +A + +M +NG + TY++L++G ++G+ K++E+ +M
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 464 AKNNCVYNEVCYSV-LIHGLCEDGKLREARMVWTQMLS 500
N ++ +++ ++ L DG+L ++ ++ MLS
Sbjct: 634 RSNG--FSGDAFTIKMVADLITDGRLDKS---FSDMLS 666
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/404 (31%), Positives = 216/404 (53%), Gaps = 2/404 (0%)
Query: 189 LPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
+P+ + F V+ + ++ D I L+ +M D+Y++ L+ C+ +RL A+
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALA 135
Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
LL +M G P+ VT L+NG C+ A LVD+M G +PN V YNT+I+GLC
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
+L+ A+ + M + VTY T+I+GL GR D AR+L M +RK N
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
++ LI KEG +A L+K+M+ + PN Y++LI+G C G +A+ + M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
++ GC + TY++L+ GF +S + ++++ +M V + Y+ LIHG C+ GKL
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
A+ V+ +M+ G PD+V Y+ ++ LCN G +E+AL + ++ + + D+ TYN
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL--QKSEMDVDIITYN 433
Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEK 592
I++ LC+ + + L S+ +G PD + ++ L K
Sbjct: 434 IIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 212/425 (49%), Gaps = 5/425 (1%)
Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
++ F VL VI + + + Y+ + N + I + +F ++I CR + A+
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMEN---LGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
L +M P I T +L++G C+ NR EAV L+D M G P V +N +INGL
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194
Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
CKN +L A ++ M KG + VTYNTLI GL G A LL MV K PN
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254
Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
+ + +I+ VK G ++ + M R N + Y++LI+G G DA ++
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
M+ KGC P+ V Y+ LI G C+ + ++ ++ EM G +AFTY++L+ G+ ++GK
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
+ A +++ M + V Y++L+ LC +GK+ +A ++ + D++ Y+
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNI 434
Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
+I GLC ++EA LF + +PD Y +++ LC++ + L M +
Sbjct: 435 IIQGLCRTDKLKEAWCLFRSL--TRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492
Query: 573 RGCDP 577
G P
Sbjct: 493 DGFMP 497
Score = 200 bits (508), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 191/381 (50%), Gaps = 2/381 (0%)
Query: 209 DNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVL 268
D+A LF EM P I + ++ + K N+ D + L +M+ G +F +L
Sbjct: 61 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTIL 120
Query: 269 INGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKC 328
I+ C+ L A L+ M G P+ VT +L++G C +AVSL+D M
Sbjct: 121 IHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGF 180
Query: 329 MPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMK 388
+PN V Y T+INGL K + V ME++ + Y+TLISGL G+ DA +
Sbjct: 181 VPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR 240
Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
L + M+++ PN + ++ALID + G EA + EMI N FTY+SL+ GF
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
G A ++ M C + V Y+ LI G C+ ++ + ++ +M +G D
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAF 360
Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
Y+++IHG C AG + A K+FN M ++ PD+ TYNILL+ LC I ++ ++
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRM--VDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 418
Query: 569 SMMDRGCDPDLVTCNIFLTAL 589
+ D D++T NI + L
Sbjct: 419 DLQKSEMDVDIITYNIIIQGL 439
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 201/413 (48%), Gaps = 23/413 (5%)
Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
+ D+A L EM P+ V F ++ + K + L M G + ++
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEER 361
LIH C L A++LL +M+ P+ VT G+++NG + R + ++ SM+
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 362 KFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEA 421
F N IY+T+I+GL K +A++++ M +KG + + V Y+ LI GL G+ +A
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 422 EEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHG 481
+L +M+ N +++L+ F + G +A ++K+M + + V N Y+ LI+G
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 298
Query: 482 LCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
C G L +A+ ++ M+S+GC PDVV Y+++I G C + VE+ +KLF EM
Sbjct: 299 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM--TYQGLV 356
Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTD 601
D FTYN L++ C+ ++ + + N M+D G PD+VT NI L L
Sbjct: 357 GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNN--------- 407
Query: 602 FLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
+ +VE + + + T+ ++Q LCR +++ A
Sbjct: 408 ------------GKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 153/295 (51%), Gaps = 3/295 (1%)
Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
++N++++ + G + A +V K I PN + F +I T + G + A L+
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRK---IDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
+EM R+ P+++TY +L++G C L +A + D M GCFP VT+N LI G CK+
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
+ KL M +G + + TYNTLIHG C G L+ A + +RMV P+ VTY
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
+++ L G+ ++ +++ + V+ Y+ +I GL + K ++A L++ +
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR 457
Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
KG KP+ + Y +I GLCR G EA+++ M +G + Y ++ + S
Sbjct: 458 KGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTS 512
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 147/303 (48%), Gaps = 10/303 (3%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIF---IFKAYGKAHLVEEAIRLF 141
T+ +LI +NSG + +L M + K ++ + IF + + K + EA L+
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRK---IDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 142 HTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
M+ V ++NS++N G A ++ +V+ P+ +T+N +I
Sbjct: 278 KEMIRR-SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK---GCFPDVVTYNTLITG 333
Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
C+ V++ ++LF EM + D +TY TL+ G C+ +L+ A + + M G P
Sbjct: 334 FCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD 393
Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
VT+N+L++ LC NG++ +A +V+++ + +TYN +I GLC L +A L
Sbjct: 394 IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
+ P+ + Y T+I+GL + G + ++ M+E F +E IY + +
Sbjct: 454 SLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDHYTSL 513
Query: 382 KAE 384
AE
Sbjct: 514 SAE 516
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 221/417 (52%), Gaps = 5/417 (1%)
Query: 173 ALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCT 232
A++ ++ +V ++ P+ + FN ++ + +L D I L ++M V D+YT+
Sbjct: 69 AIDLFSDMVKSRP---FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 233 LMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKG 292
+++ C ++ A+ +L +M G P VT L+NG C+ + A LVD M G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 293 CLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGA 352
P+ V YN +I LC ++ A + PN VTY ++NGL R D A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 353 RVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGL 412
R+L M ++K N YS L+ K GK +A +L+++M+ P+ V YS+LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 413 CRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNE 472
C + DEA ++ M++ GC A+ +Y++L+ GF ++ + ++++++M++ V N
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 473 VCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNE 532
V Y+ LI G + G + +A+ ++QM G PD+ Y+ ++ GLC+ G +E+AL +F +
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 533 MLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
M + + D+ TY ++ +CK + + L S+ +G PD+VT ++ L
Sbjct: 426 M--QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 207/391 (52%), Gaps = 10/391 (2%)
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
P+ +T ++ CR V +A+ L +M +PDI Y ++D LCK R+++A
Sbjct: 153 PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDF 212
Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
E++ G P VT+ L+NGLC + AA+L+ +M K PN +TY+ L+
Sbjct: 213 FKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 272
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
G + +A L + MV P+ VTY ++INGL R + ++ M + +
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
Y+TLI+G K + ED MKL+++M ++G NTV Y+ LI G + G D+A+E +M
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
G + + +TY+ L+ G ++G+ KA+ I++DM K + V Y+ +I G+C+ GK+
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNI 549
EA ++ + +G KPD+V Y++M+ GLC G + E L+ +M Q + +
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM------KQEGLMKNDC 506
Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
L+ +I+ S +L+ M+ G P L+
Sbjct: 507 TLS----DGDITLSAELIKKMLSCGYAPSLL 533
Score = 195 bits (496), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 117/382 (30%), Positives = 193/382 (50%), Gaps = 2/382 (0%)
Query: 200 KTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCF 259
KT R +++AI LF +M P I + L+ + K + D + L +M+V G
Sbjct: 58 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117
Query: 260 PTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSL 319
TFN++IN C ++ A ++ M G P+ VT +L++G C + + AVSL
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 320 LDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFK 379
+D+MV P+ V Y II+ L K R D +E + N Y+ L++GL
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 380 EGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFT 439
+ DA +L M++K PN + YSAL+D + GK EA+E+ EM+ + T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 440 YSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
YSSL+ G + +A +++ M C+ + V Y+ LI+G C+ ++ + ++ +M
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357
Query: 500 SRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSN 559
RG + V Y+++I G AG V++A + F++M PD++TYNILL LC
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI--SPDIWTYNILLGGLCDNGE 415
Query: 560 ISHSIDLLNSMMDRGCDPDLVT 581
+ ++ + M R D D+VT
Sbjct: 416 LEKALVIFEDMQKREMDLDIVT 437
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 211/422 (50%), Gaps = 27/422 (6%)
Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
++ +L++A+ L +M FP+ V FN L++ + K + L M + G +
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLY 121
Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
T+N +I+ C + A+S+L +M+ P+ VT G+++NG + R D ++ M
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181
Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
E + + Y+ +I L K + DA +K++ KG +PN V Y+AL++GLC +
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241
Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVL 478
+A +L +MI N TYS+L+ F ++GK +A E++++M + + + V YS L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 479 IHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEP 538
I+GLC ++ EA ++ M+S+GC DVV+Y+++I+G C A VE+ +KLF EM +
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM--SQR 359
Query: 539 KSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
+ TYN L+ + ++ + + + M G PD+ T NI L L + E +
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK- 418
Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAINKC 658
I E M ++ + T+ V++ +C+ +++ A
Sbjct: 419 --------------------ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEA---- 454
Query: 659 WS 660
WS
Sbjct: 455 WS 456
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/318 (30%), Positives = 157/318 (49%), Gaps = 4/318 (1%)
Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
I + K V +A F ++ + V ++ +++N + + A + ++
Sbjct: 196 IIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK 254
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
K I PN +T++ ++ + G V A +LF EM + +PDI TY +L++GLC +R+
Sbjct: 255 K---ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
DEA + D M GC V++N LING CK + KL M +G + N VTYNTL
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
I G G++DKA +M P+ TY ++ GL G + M++R+
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
++ Y+T+I G+ K GK E+A L+ + KG KP+ V Y+ ++ GLC G E E
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Query: 424 ILFEMINNGCAANAFTYS 441
+ +M G N T S
Sbjct: 492 LYTKMKQEGLMKNDCTLS 509
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 188/395 (47%), Gaps = 14/395 (3%)
Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
+ + + + V +A+ L MV E K + ++N++++ + + + A +F+ I
Sbjct: 161 LVNGFCRRNRVSDAVSLVDKMV-EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEI--- 216
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
+ I PN +T+ ++ +C +A +L +M + P++ TY L+D K ++
Sbjct: 217 ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKV 276
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
EA L +EM P VT++ LINGLC + + A ++ D M KGCL + V+YNTL
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTL 336
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
I+G C ++ + L M + N VTY T+I G + G M+
Sbjct: 337 INGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGI 396
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
+ + Y+ L+ GL G+ E A+ +++ M ++ + V Y+ +I G+C+ GK +EA
Sbjct: 397 SPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWS 456
Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
+ + G + TY+++M G G H+ ++ M + + N+ S
Sbjct: 457 LFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS------- 509
Query: 484 EDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLC 518
DG + + + +MLS G P ++ + G+C
Sbjct: 510 -DGDITLSAELIKKMLSCGYAPSLL--KDIKSGVC 541
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 129/432 (29%), Positives = 227/432 (52%), Gaps = 5/432 (1%)
Query: 150 CKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVD 209
C ++ ++ V ++EG+ +LE + ++ N P+ T N ++ +V + G
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFN--PSVYTCNAILGSVVKSGEDV 175
Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
+ +EM R PD+ T+ L++ LC E +++ L+ +M+ G PT VT+N ++
Sbjct: 176 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 235
Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
+ CK G A +L+D+M KG + TYN LIH LC + K LL M
Sbjct: 236 HWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIH 295
Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKL 389
PNEVTY T+ING G+ + +++L M N ++ LI G EG ++A+K+
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355
Query: 390 WKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFE 449
+ M KG P+ V Y L+DGLC+ + D A M NG TY+ ++ G +
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 415
Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
+G +AV + +M+K+ + V YS LI+G C+ G+ + A+ + ++ G P+ +
Sbjct: 416 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 475
Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
YS++I+ C G ++EA++++ M+ LE ++ D FT+N+L+ +LCK ++ + + +
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMI-LEGHTR-DHFTFNVLVTSLCKAGKVAEAEEFMRC 533
Query: 570 MMDRGCDPDLVT 581
M G P+ V+
Sbjct: 534 MTSDGILPNTVS 545
Score = 206 bits (524), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 135/440 (30%), Positives = 213/440 (48%), Gaps = 5/440 (1%)
Query: 153 TVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAI 212
T+ ++N+VL+ ++G + A+E +H+ K + + T+N++I +CR +
Sbjct: 227 TIVTYNTVLHWYCKKGRFKAAIELLDHM---KSKGVDADVCTYNMLIHDLCRSNRIAKGY 283
Query: 213 QLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGL 272
L R+M R P+ TY TL++G E ++ A LL+EM G P VTFN LI+G
Sbjct: 284 LLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGH 343
Query: 273 CKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
G A K+ M KG P+EV+Y L+ GLC D A RM +
Sbjct: 344 ISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGR 403
Query: 333 VTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQ 392
+TY +I+GL K G + +L M + + YS LI+G K G+ + A ++ +
Sbjct: 404 ITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCR 463
Query: 393 MMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGK 452
+ G PN ++YS LI CR+G EA I MI G + FT++ L+ ++GK
Sbjct: 464 IYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGK 523
Query: 453 GHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSS 512
+A E + M + + N V + LI+G G+ +A V+ +M G P Y S
Sbjct: 524 VAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGS 583
Query: 513 MIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMD 572
++ GLC G + EA K + + + D YN LL A+CK N++ ++ L M+
Sbjct: 584 LLKGLCKGGHLREAEKFLKSLHAVP--AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQ 641
Query: 573 RGCDPDLVTCNIFLTALKEK 592
R PD T ++ L K
Sbjct: 642 RSILPDSYTYTSLISGLCRK 661
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 137/514 (26%), Positives = 228/514 (44%), Gaps = 18/514 (3%)
Query: 156 SFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLF 215
++N+++N EG A + N +++ + PN +TFN +I G A+++F
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLS---FGLSPNHVTFNALIDGHISEGNFKEALKMF 356
Query: 216 REMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKN 275
M + P +Y L+DGLCK D A M+ +G +T+ +I+GLCKN
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 276 GELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTY 335
G L A L++ M G P+ VTY+ LI+G C G A ++ R+ PN + Y
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 476
Query: 336 GTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMME 395
T+I ++G + R+ +M + + ++ L++ L K GK +A + + M
Sbjct: 477 STLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTS 536
Query: 396 KGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK 455
G PNTV + LI+G G+ +A + EM G FTY SL+KG + G +
Sbjct: 537 DGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLRE 596
Query: 456 AVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIH 515
A + K + + V Y+ L+ +C+ G L +A ++ +M+ R PD Y+S+I
Sbjct: 597 AEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLIS 656
Query: 516 GLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGC 575
GLC G A+ LF + P+ Y ++ + K I M + G
Sbjct: 657 GLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 715
Query: 576 DPDLVTCNIFLTALKE--KLE---------APQDGTDFLNELAIRLF---KRQRTSGGFK 621
PD+VT N + K+E Q+G L I L KR+ S F
Sbjct: 716 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFL 775
Query: 622 IVEVMLQKFLSPQTSTWERVVQELCRPKRIQAAI 655
+ ++ + P T +V +C ++ +
Sbjct: 776 LYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 131/566 (23%), Positives = 242/566 (42%), Gaps = 48/566 (8%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
TF L+ +G E + M + + SF + YG + +A +F M
Sbjct: 510 TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEM 569
Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILP---NTLTFNLVIKT 201
H T ++ S+L + + G A +F K ++ +P +T+ +N ++
Sbjct: 570 TKVGH-HPTFFTYGSLLKGLCKGGHLREAEKFL------KSLHAVPAAVDTVMYNTLLTA 622
Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQ------- 254
+C+ G + A+ LF EM R+ PD YTY +L+ GLC++ + A+L E +
Sbjct: 623 MCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLP 682
Query: 255 --------VDGCF---------------------PTPVTFNVLINGLCKNGELGRAAKLV 285
VDG F P VT N +I+G + G++ + L+
Sbjct: 683 NKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLL 742
Query: 286 DNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKL 345
M + PN TYN L+HG + ++ + L ++ + +P+++T +++ G+ +
Sbjct: 743 PEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICES 802
Query: 346 GRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVY 405
G ++L + R V+ Y ++ LIS G+ A L K M G +
Sbjct: 803 NMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTC 862
Query: 406 SALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAK 465
A++ L R + E+ +L EM G + + Y L+ G G A + ++M
Sbjct: 863 DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIA 922
Query: 466 NNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
+ V S ++ L + GK EA ++ ML P + ++++++H C G+V E
Sbjct: 923 HKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIE 982
Query: 526 ALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
AL+L ++ + D+ +YN+L+ LC + +++ + +L M G + T
Sbjct: 983 ALEL--RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKAL 1040
Query: 586 LTALKEKLEAPQDGTDFLNELAIRLF 611
+ L + A L +L R F
Sbjct: 1041 IRGLLARETAFSGADIILKDLLARGF 1066
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 23/184 (12%)
Query: 468 CVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEAL 527
C N Y +LI +G ++++ ++ M G P V ++++ + +G
Sbjct: 119 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 178
Query: 528 KLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLT 587
EML + K PDV T+NIL+N LC + + S L+ M G P +VT N L
Sbjct: 179 SFLKEML--KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 236
Query: 588 ALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCR 647
K+ R ++++ M K + T+ ++ +LCR
Sbjct: 237 W---------------------YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCR 275
Query: 648 PKRI 651
RI
Sbjct: 276 SNRI 279
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 147/565 (26%), Positives = 276/565 (48%), Gaps = 21/565 (3%)
Query: 105 VLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVI 164
V+ MR+ K ++ + A+ + + + LF M E + TV F +++
Sbjct: 155 VVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQM-QELGYEPTVHLFTTLIRGF 213
Query: 165 IQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCE 224
+EG AL + + K ++ + + +N+ I + ++G VD A + F E+ +
Sbjct: 214 AKEGRVDSALSLLDEM---KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLK 270
Query: 225 PDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKL 284
PD TY +++ LCK NRLDEAV + + ++ + P +N +I G G+ A L
Sbjct: 271 PDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 285 VDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVK 344
++ KG +P+ + YN ++ L G +D+A+ + + M PN TY +I+ L +
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCR 389
Query: 345 LGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
G+ + SM++ N + ++ L K K ++A ++++M K C P+ +
Sbjct: 390 AGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEIT 449
Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
+ +LIDGL +VG+ D+A ++ +M+++ C N+ Y+SL+K FF G+ +I+KDM
Sbjct: 450 FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 465 KNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVE 524
NC + + + + + G+ + R ++ ++ +R PD +YS +IHGL AG
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFAN 569
Query: 525 EALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNI 584
E +LF M E D YNI+++ CK ++ + LL M +G +P +VT
Sbjct: 570 ETYELFYSMK--EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGS 627
Query: 585 FLTALK--EKLEAP----QDGTDFLNELAIRLF--------KRQRTSGGFKIVEVMLQKF 630
+ L ++L+ ++ EL + ++ K R + I+E ++QK
Sbjct: 628 VIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKG 687
Query: 631 LSPQTSTWERVVQELCRPKRIQAAI 655
L+P TW ++ L + + I A+
Sbjct: 688 LTPNLYTWNSLLDALVKAEEINEAL 712
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/540 (26%), Positives = 256/540 (47%), Gaps = 42/540 (7%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
+ ++I Y ++G F +L R R + + ++ I K V+EA+++F M
Sbjct: 310 AYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM 369
Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
+ + ++N +++++ + G A E + + A + PN T N+++ +C+
Sbjct: 370 KKD--AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKA---GLFPNVRTVNIMVDRLCK 424
Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
+D A +F EM + C PD T+C+L+DGL K R+D+A + ++M C +
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
+ LI +G K+ +M + C P+ NT + + G +K ++ + +
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
A + +P+ +Y +I+GL+K G A + + SM+E+ ++ Y+ +I G K GK
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 385 DAMKLWKQMMEKGCKP-----------------------------------NTVVYSALI 409
A +L ++M KG +P N V+YS+LI
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 410 DGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCV 469
DG +VG+ DEA IL E++ G N +T++SL+ ++ + ++A+ ++ M + C
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724
Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
N+V Y +LI+GLC+ K +A + W +M +G KP ++Y++MI GL AG++ EA L
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
F+ PD YN ++ L + + L RG TC + L L
Sbjct: 785 FDRFKA--NGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTL 842
Score = 218 bits (555), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/538 (26%), Positives = 250/538 (46%), Gaps = 22/538 (4%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
T+ S+I + + + + +RV ++ + YG A +EA +++
Sbjct: 275 TYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEA----YSL 330
Query: 145 VDEFHCKRTVKS---FNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKT 201
++ K ++ S +N +L + + G AL+ + + + PN T+N++I
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM----KKDAAPNLSTYNILIDM 386
Query: 202 VCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPT 261
+CR G +D A +L M P++ T ++D LCK +LDEA + +EM C P
Sbjct: 387 LCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPD 446
Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLD 321
+TF LI+GL K G + A K+ + M C N + Y +LI G + +
Sbjct: 447 EITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYK 506
Query: 322 RMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEG 381
M+ C P+ T ++ + K G G + ++ R+F + YS LI GL K G
Sbjct: 507 DMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAG 566
Query: 382 KAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYS 441
A + +L+ M E+GC +T Y+ +IDG C+ GK ++A ++L EM G TY
Sbjct: 567 FANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYG 626
Query: 442 SLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSR 501
S++ G + + +A ++++ N V YS LI G + G++ EA ++ +++ +
Sbjct: 627 SVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQK 686
Query: 502 GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNIS 561
G P++ ++S++ L A + EAL F M E K P+ TY IL+N LCK +
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSM--KELKCTPNQVTYGILINGLCKVRKFN 744
Query: 562 HSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
+ M +G P ++ ++ L + + G LF R + +GG
Sbjct: 745 KAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA---------LFDRFKANGG 793
Score = 150 bits (380), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 204/423 (48%), Gaps = 14/423 (3%)
Query: 85 TFYSLIQHYANSGD----FKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRL 140
TF SLI G +K E +L R +V S I F +G+ E+ ++
Sbjct: 449 TFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY-TSLIKNFFNHGRK---EDGHKI 504
Query: 141 FHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIK 200
+ M+++ +C ++ N+ ++ + + G + + I K +P+ +++++I
Sbjct: 505 YKDMINQ-NCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI---KARRFVPDARSYSILIH 560
Query: 201 TVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFP 260
+ + G + +LF M + C D Y ++DG CK ++++A LL+EM+ G P
Sbjct: 561 GLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEP 620
Query: 261 TPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLL 320
T VT+ +I+GL K L A L + K N V Y++LI G G +D+A +L
Sbjct: 621 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
+ ++ PN T+ ++++ LVK + SM+E K N+ Y LI+GL K
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
K A W++M ++G KP+T+ Y+ +I GL + G EA + NG ++ Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNC-VYNEVCYSVLIHGLCEDGKLREARMVWTQML 499
+++++G + A ++++ + ++N+ C VL+ L ++ L +A +V +
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCV-VLLDTLHKNDCLEQAAIVGAVLR 859
Query: 500 SRG 502
G
Sbjct: 860 ETG 862
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/394 (25%), Positives = 183/394 (46%), Gaps = 26/394 (6%)
Query: 262 PVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN-LDKAVSLL 320
P ++N L+ + + +++ M + G P+ T ++ G C+K N L + ++
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLG-CVKANKLREGYDVV 156
Query: 321 DRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKE 380
M K P Y T+I + + + M+E + ++++TLI G KE
Sbjct: 157 QMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKE 216
Query: 381 GKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTY 440
G+ + A+ L +M + V+Y+ ID +VGK D A + E+ NG + TY
Sbjct: 217 GRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTY 276
Query: 441 SSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLS 500
+S++ ++ + +AVE+++ + KN V Y+ +I G GK EA + + +
Sbjct: 277 TSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRA 336
Query: 501 RGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNI 560
+G P V+AY+ ++ L G V+EALK+F EM + + P++ TYNIL++ LC+ +
Sbjct: 337 KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEM---KKDAAPNLSTYNILIDMLCRAGKL 393
Query: 561 SHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGF 620
+ +L +SM G P++ T NI + RL K Q+
Sbjct: 394 DTAFELRDSMQKAGLFPNVRTVNIMVD---------------------RLCKSQKLDEAC 432
Query: 621 KIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
+ E M K +P T+ ++ L + R+ A
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDA 466
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 225/457 (49%), Gaps = 8/457 (1%)
Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
+ AY L+EEA L + M + V ++N+V+N + + G Y RA E + ++ +
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSP-GVYTYNTVINGLCKHGKYERAKEVFAEMLRS 334
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
+ P++ T+ ++ C+ G V ++F +M R+ PD+ + ++M + L
Sbjct: 335 ---GLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNL 391
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
D+A++ + ++ G P V + +LI G C+ G + A L + M +GC + VTYNT+
Sbjct: 392 DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
+HGLC + L +A L + M P+ T +I+G KLG + + M+E++
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEE 423
++ Y+TL+ G K G + A ++W M+ K P + YS L++ LC G EA
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 424 ILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLC 483
+ EMI+ +S++KG+ SG + M V + + Y+ LI+G
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 484 EDGKLREARMVWTQMLSR--GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ 541
+ + +A + +M G PDV Y+S++HG C ++EA + +M+ E
Sbjct: 632 REENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI--ERGVN 689
Query: 542 PDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPD 578
PD TY ++N Q N++ + + + M+ RG PD
Sbjct: 690 PDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 213 bits (543), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/515 (26%), Positives = 238/515 (46%), Gaps = 59/515 (11%)
Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
V + N ++N + ++G + F + + + + P+ +T+N +I GL++ A +
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQV---QEKGVYPDIVTYNTLISAYSSKGLMEEAFE 291
Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
L MP + P +YTY T+++GLCK + + A + EM G P T+ L+ C
Sbjct: 292 LMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEAC 351
Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
K G++ K+ +M + +P+ V +++++ GNLDKA+ + + + +P+ V
Sbjct: 352 KKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNV 411
Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
Y +I G + G + M ++ ++ Y+T++ GL K +A KL+ +M
Sbjct: 412 IYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Query: 394 MEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKG 453
E+ P++ + LIDG C++G A E+ +M + TY++L+ GF + G
Sbjct: 472 TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDI 531
Query: 454 HKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSM 513
A EIW DM + + YS+L++ LC G L EA VW +M+S+ KP V+ +SM
Sbjct: 532 DTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 514 IHGLCNAGSVEEALKLFNEML-------CLEPKS-------------------------- 540
I G C +G+ + +M+ C+ +
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 541 --QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
PDVFTYN +L+ C+Q+ + + +L M++RG +PD T + +
Sbjct: 652 GLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ------ 705
Query: 599 GTDFLNELAIRLFKRQRTSGGFKIVEVMLQKFLSP 633
D L E F+I + MLQ+ SP
Sbjct: 706 --DNLTE-------------AFRIHDEMLQRGFSP 725
Score = 178 bits (452), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 218/480 (45%), Gaps = 54/480 (11%)
Query: 62 EQPFSDEIFNSTPKLGSYQLGDSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSF 121
E+ F E+ N+ P G + G T+ ++I G ++ + V M R ++
Sbjct: 287 EEAF--ELMNAMPGKG-FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 122 IFIFKAYGKAHLVEEAIRLFHTM-----VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEF 176
+ K V E ++F M V + C F+S++++ + G +AL +
Sbjct: 344 RSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC------FSSMMSLFTRSGNLDKALMY 397
Query: 177 YNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDG 236
+N + K ++P+ + + ++I+ CR G++ A+ L EM + C D+ TY T++ G
Sbjct: 398 FNSV---KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 237 LCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPN 296
LCK L EA L +EM FP T +LI+G CK G L A +L M K +
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 297 EVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLM 356
VTYNTL+ G G++D A + MV+ + +P ++Y ++N L G + RV
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 357 SMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVG 416
M + I +++I G + G A D ++M+ +G P+ + Y+ LI G R
Sbjct: 575 EMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREE 634
Query: 417 KPDEAEEILFEMI--NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
+A ++ +M G + FTY+S++
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSIL------------------------------ 664
Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEML 534
HG C +++EA +V +M+ RG PD Y+ MI+G + ++ EA ++ +EML
Sbjct: 665 -----HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML 719
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 143/565 (25%), Positives = 246/565 (43%), Gaps = 73/565 (12%)
Query: 105 VLYRMRREKRVVLEKSFI----FIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSV 160
VLYR R + + L + F+ F F + L A + H +V R + + +
Sbjct: 84 VLYRCRND--LTLGQRFVDQLGFHFPNFKHTSLSLSA--MIHILV---RSGRLSDAQSCL 136
Query: 161 LNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPV 220
L +I + G+ LE N + ++ N N F+L+I+T + + A + F +
Sbjct: 137 LRMIRRSGVSR--LEIVNSL-DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRS 193
Query: 221 RNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGR 280
+ I L+ L + ++ A + E+ G T N+++N LCK+G++ +
Sbjct: 194 KGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEK 253
Query: 281 AAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
+ + KG P+ VTYNTLI KG +++A L++ M P TY T+IN
Sbjct: 254 VGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVIN 313
Query: 341 GLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKP 400
GL K GK E A +++ +M+ G P
Sbjct: 314 GLC-----------------------------------KHGKYERAKEVFAEMLRSGLSP 338
Query: 401 NTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIW 460
++ Y +L+ C+ G E E++ +M + + +SS+M F SG KA+ +
Sbjct: 339 DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 398
Query: 461 KDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNA 520
+ + + + V Y++LI G C G + A + +ML +GC DVV Y++++HGLC
Sbjct: 399 NSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 458
Query: 521 GSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLV 580
+ EA KLFNEM E PD +T IL++ CK N+ ++++L M ++ D+V
Sbjct: 459 KMLGEADKLFNEM--TERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVV 516
Query: 581 TCNIFLTAL------------------KEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKI 622
T N L KE L P + +N L + + F++
Sbjct: 517 TYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALC----SKGHLAEAFRV 572
Query: 623 VEVMLQKFLSPQTSTWERVVQELCR 647
+ M+ K + P +++ CR
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCR 597
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 131/271 (48%), Gaps = 11/271 (4%)
Query: 66 SDEIFNSTPKLGSYQLGDS-TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEK-SFIF 123
+D++FN + + DS T LI + G+ ++ M L++ +EKR+ L+ ++
Sbjct: 464 ADKLFNEMTERALFP--DSYTLTILIDGHCKLGNLQN-AMELFQKMKEKRIRLDVVTYNT 520
Query: 124 IFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNA 183
+ +GK ++ A ++ MV + T S++ ++N + +G A ++ +++
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSK-EILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
NI P + N +IK CR G + +M PD +Y TL+ G +E +
Sbjct: 580 ---NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENM 636
Query: 244 DEAVLLLDEMQVD--GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYN 301
+A L+ +M+ + G P T+N +++G C+ ++ A ++ M +G P+ TY
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Query: 302 TLIHGLCLKGNLDKAVSLLDRMVASKCMPNE 332
+I+G + NL +A + D M+ P++
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 219 bits (559), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 146/496 (29%), Positives = 236/496 (47%), Gaps = 43/496 (8%)
Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
V S+N+V+ + +ALE N + K + +T+ ++I C+ G +D A+
Sbjct: 177 VFSYNTVIRGFCEGKELEKALELANEM---KGSGCSWSLVTWGILIDAFCKAGKMDEAMG 233
Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC 273
+EM E D+ Y +L+ G C LD L DE+ G P +T+N LI G C
Sbjct: 234 FLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFC 293
Query: 274 KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEV 333
K G+L A+++ + M +G PN TY LI GLC G +A+ LL+ M+ PN V
Sbjct: 294 KLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAV 353
Query: 334 TYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQM 393
TY IIN L K G D ++ M++R+ + Y+ L+ GL +G ++A KL M
Sbjct: 354 TYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM 413
Query: 394 MEKG--CKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESG 451
++ P+ + Y+ALI GLC+ + +A +I ++ A + T + L+ ++G
Sbjct: 414 LKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAG 473
Query: 452 KGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYS 511
+KA+E+WK ++ + V N Y+ +I G C+ G L A+ + +M +P V Y+
Sbjct: 474 DVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYN 533
Query: 512 SMIHGLCNAGSVEEALKLFNEML--------------------CLEPKS----------- 540
++ LC GS+++A +LF EM + KS
Sbjct: 534 CLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 541 --QPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQD 598
PD+FTY+ L+N K + +I + M+D G +PD C+ L K Q
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL-----KYCISQG 648
Query: 599 GTDFLNELAIRLFKRQ 614
TD L EL +L +
Sbjct: 649 ETDKLTELVKKLVDKD 664
Score = 211 bits (538), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 125/432 (28%), Positives = 214/432 (49%), Gaps = 39/432 (9%)
Query: 187 NILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEA 246
+++P+ ++N VI+ C ++ A++L EM C + T+ L+D CK ++DEA
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 247 VLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHG 306
+ L EM+ G V + LI G C GEL R L D + +G P +TYNTLI G
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 307 LCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVN 366
C G L +A + + M+ PN TY +I+GL +G+ + ++L M E+ N
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 367 EYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILF 426
Y+ +I+ L K+G DA+++ + M ++ +P+ + Y+ L+ GLC G DEA ++L+
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 427 EMINNGCAA--NAFTYSSLMKGF-----------------------------------FE 449
M+ + + +Y++L+ G +
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLK 471
Query: 450 SGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVA 509
+G +KA+E+WK ++ + V N Y+ +I G C+ G L A+ + +M +P V
Sbjct: 472 AGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFD 531
Query: 510 YSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNS 569
Y+ ++ LC GS+++A +LF EM + PDV ++NI+++ K +I + LL
Sbjct: 532 YNCLLSSLCKEGSLDQAWRLFEEM--QRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 570 MMDRGCDPDLVT 581
M G PDL T
Sbjct: 590 MSRAGLSPDLFT 601
Score = 194 bits (492), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 179/323 (55%)
Query: 266 NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
N+L+ GLC+N E G+A L+ M +P+ +YNT+I G C L+KA+ L + M
Sbjct: 146 NILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKG 205
Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
S C + VT+G +I+ K G+ + L M+ + +Y++LI G G+ +
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDR 265
Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMK 445
L+ +++E+G P + Y+ LI G C++G+ EA EI MI G N +TY+ L+
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLID 325
Query: 446 GFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKP 505
G GK +A+++ M + + N V Y+++I+ LC+DG + +A + M R +P
Sbjct: 326 GLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRP 385
Query: 506 DVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSID 565
D + Y+ ++ GLC G ++EA KL ML + PDV +YN L++ LCK++ + ++D
Sbjct: 386 DNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALD 445
Query: 566 LLNSMMDRGCDPDLVTCNIFLTA 588
+ + ++++ D VT NI L +
Sbjct: 446 IYDLLVEKLGAGDRVTTNILLNS 468
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 206/450 (45%), Gaps = 63/450 (14%)
Query: 210 NAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLI 269
NA+ +F++ V + + LM L + + A +M F V+ + L+
Sbjct: 56 NAVSVFQQ-AVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLL 114
Query: 270 NGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCM 329
+ + G A ++ M +G N +N L+ GLC KAVSLL M + M
Sbjct: 115 ECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLM 174
Query: 330 PNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA-EDAMK 388
P+ +Y T+I G F EGK E A++
Sbjct: 175 PDVFSYNTVIRG------------------------------------FCEGKELEKALE 198
Query: 389 LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFF 448
L +M GC + V + LID C+ GK DEA L EM G A+ Y+SL++GF
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFC 258
Query: 449 ESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVV 508
+ G+ + ++ ++ + + Y+ LI G C+ G+L+EA ++ M+ RG +P+V
Sbjct: 259 DCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVY 318
Query: 509 AYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLN 568
Y+ +I GLC G +EAL+L N M +E +P+ TYNI++N LCK ++ +++++
Sbjct: 319 TYTGLIDGLCGVGKTKEALQLLNLM--IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376
Query: 569 SMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQ 628
M R PD +T NI L L K + L+E + K++ +ML+
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGD--------LDEAS-------------KLLYLMLK 415
Query: 629 --KFLSPQTSTWERVVQELCRPKRIQAAIN 656
+ P ++ ++ LC+ R+ A++
Sbjct: 416 DSSYTDPDVISYNALIHGLCKENRLHQALD 445
Score = 156 bits (394), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 194/397 (48%), Gaps = 7/397 (1%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
+ SLI+ + + G+ + + + ++ + + + K ++EA +F M
Sbjct: 249 VYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFM 308
Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
+ E + V ++ +++ + G AL+ N ++ PN +T+N++I +C+
Sbjct: 309 I-ERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEE---PNAVTYNIIINKLCK 364
Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP-- 262
GLV +A+++ M R PD TY L+ GLC + LDEA LL M D + P
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDV 424
Query: 263 VTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
+++N LI+GLCK L +A + D + K + VT N L++ G+++KA+ L +
Sbjct: 425 ISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQ 484
Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
+ SK + N TY +I+G K G +L M + + + Y+ L+S L KEG
Sbjct: 485 ISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS 544
Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
+ A +L+++M P+ V ++ +IDG + G AE +L M G + + FTYS
Sbjct: 545 LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSK 604
Query: 443 LMKGFFESGKGHKAVEIWKDMAKNNCVYN-EVCYSVL 478
L+ F + G +A+ + M + + +C SVL
Sbjct: 605 LINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 112 bits (281), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 182/393 (46%), Gaps = 51/393 (12%)
Query: 82 GDS----TFYSLIQHYANSGDFK-SLEMVLYRMRREKR--VVLEKSFIFIFKAYGKAHLV 134
GDS T+ +LI+ + G K + E+ + + R R V I GK
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGK---T 333
Query: 135 EEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLT 194
+EA++L + M+++ V ++N ++N + ++GL A+E + K P+ +T
Sbjct: 334 KEALQLLNLMIEKDEEPNAV-TYNIIINKLCKDGLVADAVEIVELM---KKRRTRPDNIT 389
Query: 195 FNLVIKTVCRLGLVDNAIQLFREM--PVRNCEPDIYTYCTLMDGLCKENRLDEAV----L 248
+N+++ +C G +D A +L M +PD+ +Y L+ GLCKENRL +A+ L
Sbjct: 390 YNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 249 LLDEMQVDGCFPTPV-------------------------------TFNVLINGLCKNGE 277
L++++ T + T+ +I+G CK G
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 278 LGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGT 337
L A L+ M + P+ YN L+ LC +G+LD+A L + M P+ V++
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 338 IINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKG 397
+I+G +K G +L+ M + + YS LI+ K G ++A+ + +M++ G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Query: 398 CKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN 430
+P+ + +++ G+ D+ E++ ++++
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVD 662
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 148/285 (51%), Gaps = 12/285 (4%)
Query: 134 VEEAIRLFHTMV-DEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNT 192
++EA +L + M+ D + V S+N++++ + +E H+AL+ Y+ +V +
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG---DR 459
Query: 193 LTFNLVIKTVCRLGLVDNAIQLFREMP----VRNCEPDIYTYCTLMDGLCKENRLDEAVL 248
+T N+++ + + G V+ A++L++++ VRN + TY ++DG CK L+ A
Sbjct: 460 VTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSD----TYTAMIDGFCKTGMLNVAKG 515
Query: 249 LLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
LL +M+V P+ +N L++ LCK G L +A +L + M P+ V++N +I G
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEY 368
G++ A SLL M + P+ TY +IN +KLG + M + F + +
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAH 635
Query: 369 IYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLC 413
I +++ +G+ + +L K++++K + + ++D +C
Sbjct: 636 ICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680
>sp|O04491|PPR26_ARATH Putative pentatricopeptide repeat-containing protein At1g09680
OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1
Length = 607
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 208/395 (52%), Gaps = 20/395 (5%)
Query: 201 TVCRLGLVDNAIQLFR-------EMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEM 253
T LG + +AIQ FR ++P+R C L+D + K N E+
Sbjct: 179 TYTDLGFIPDAIQCFRLSRKHRFDVPIRGCG-------NLLDRMMKLNPTGTIWGFYMEI 231
Query: 254 QVDGCFPTPV-TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGN 312
+D FP V FN+L+N CK G + A K+ D + + P V++NTLI+G C GN
Sbjct: 232 -LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGN 290
Query: 313 LDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMS-MEERKFHVNEYIYS 371
LD+ L +M S+ P+ TY +IN L K + +DGA L M +R N+ I++
Sbjct: 291 LDEGFRLKHQMEKSRTRPDVFTYSALINALCKENK-MDGAHGLFDEMCKRGLIPNDVIFT 349
Query: 372 TLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINN 431
TLI G + G+ + + +++M+ KG +P+ V+Y+ L++G C+ G A I+ MI
Sbjct: 350 TLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRR 409
Query: 432 GCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREA 491
G + TY++L+ GF G A+EI K+M +N + V +S L+ G+C++G++ +A
Sbjct: 410 GLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Query: 492 RMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILL 551
+ML G KPD V Y+ M+ C G + KL EM P V TYN+LL
Sbjct: 470 ERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM--QSDGHVPSVVTYNVLL 527
Query: 552 NALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFL 586
N LCK + ++ LL++M++ G PD +T N L
Sbjct: 528 NGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
Score = 202 bits (514), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 109/342 (31%), Positives = 187/342 (54%), Gaps = 5/342 (1%)
Query: 176 FYNHIVNAKHMNILP-NTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
FY I++A P N FN+++ C+ G + +A ++F E+ R+ +P + ++ TL+
Sbjct: 227 FYMEILDAG----FPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLI 282
Query: 235 DGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCL 294
+G CK LDE L +M+ P T++ LIN LCK ++ A L D M +G +
Sbjct: 283 NGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLI 342
Query: 295 PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARV 354
PN+V + TLIHG G +D +M++ P+ V Y T++NG K G V +
Sbjct: 343 PNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI 402
Query: 355 LMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCR 414
+ M R ++ Y+TLI G + G E A+++ K+M + G + + V +SAL+ G+C+
Sbjct: 403 VDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCK 462
Query: 415 VGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVC 474
G+ +AE L EM+ G + TY+ +M F + G ++ K+M + V + V
Sbjct: 463 EGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVT 522
Query: 475 YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHG 516
Y+VL++GLC+ G+++ A M+ ML+ G PD + Y++++ G
Sbjct: 523 YNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 176 bits (447), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 171/361 (47%), Gaps = 44/361 (12%)
Query: 154 VKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQ 213
V FN ++N +EG A + ++ I ++ P ++FN +I C++G +D +
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKR---SLQPTVVSFNTLINGYCKVGNLDEGFR 296
Query: 214 LFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVTF-------- 265
L +M PD++TY L++ LCKEN++D A L DEM G P V F
Sbjct: 297 LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHS 356
Query: 266 ---------------------------NVLINGLCKNGELGRAAKLVDNMFLKGCLPNEV 298
N L+NG CKNG+L A +VD M +G P+++
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 299 TYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSM 358
TY TLI G C G+++ A+ + M + + V + ++ G+ K GR +D R L M
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 359 EERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKP 418
++ Y+ ++ K+G A+ KL K+M G P+ V Y+ L++GLC++G+
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 419 DEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHK------AVEIWKDMAKNNCVYNE 472
A+ +L M+N G + TY++L++G K + I D+A + NE
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVNE 596
Query: 473 V 473
+
Sbjct: 597 L 597
Score = 159 bits (402), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 151/294 (51%), Gaps = 2/294 (0%)
Query: 296 NEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVL 355
N +N L++ C +GN+ A + D + P V++ T+ING K+G +G R+
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 356 MSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRV 415
ME+ + + + YS LI+ L KE K + A L+ +M ++G PN V+++ LI G R
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 416 GKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCY 475
G+ D +E +M++ G + Y++L+ GF ++G A I M + +++ Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 476 SVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLC 535
+ LI G C G + A + +M G + D V +S+++ G+C G V +A + EML
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML- 477
Query: 536 LEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
+PD TY ++++A CK+ + LL M G P +VT N+ L L
Sbjct: 478 -RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
Score = 130 bits (328), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 149/324 (45%), Gaps = 23/324 (7%)
Query: 331 NEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAEDAMKLW 390
N + ++N K G D +V + +R ++TLI+G K G ++ +L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 391 KQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFES 450
QM + +P+ YSALI+ LC+ K D A + EM G N +++L+ G +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 451 GKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAY 510
G+ E ++ M + V Y+ L++G C++G L AR + M+ RG +PD + Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 511 SSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSM 570
+++I G C G VE AL++ EM + + D ++ L+ +CK+ + + L M
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMD--QNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 571 MDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGGFKIVEVMLQKF 630
+ G PD VT + + A +K +A GFK+++ M
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDA---------------------QTGFKLLKEMQSDG 515
Query: 631 LSPQTSTWERVVQELCRPKRIQAA 654
P T+ ++ LC+ +++ A
Sbjct: 516 HVPSVVTYNVLLNGLCKLGQMKNA 539
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 253/506 (50%), Gaps = 6/506 (1%)
Query: 84 STFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHT 143
+T+ ++ + + G K L +MR V+ S+ + K+ EA+ ++
Sbjct: 154 NTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 213
Query: 144 MVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVC 203
M+ E + ++++++S++ + G + + + + PN TF + I+ +
Sbjct: 214 MILEGF-RPSLQTYSSLM---VGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLG 269
Query: 204 RLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPV 263
R G ++ A ++ + M C PD+ TY L+D LC +LD A + ++M+ P V
Sbjct: 270 RAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329
Query: 264 TFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRM 323
T+ L++ N +L + M G +P+ VT+ L+ LC GN +A LD M
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Query: 324 VASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKA 383
+PN TY T+I GL+++ R D + +ME Y Y I K G +
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 384 EDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSL 443
A++ +++M KG PN V +A + L + G+ EA++I + + + G ++ TY+ +
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509
Query: 444 MKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGC 503
MK + + G+ +A+++ +M +N C + + + LI+ L + ++ EA ++ +M
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Query: 504 KPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHS 563
KP VV Y++++ GL G ++EA++LF M ++ P+ T+N L + LCK ++ +
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGM--VQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 564 IDLLNSMMDRGCDPDLVTCNIFLTAL 589
+ +L MMD GC PD+ T N + L
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGL 653
Score = 209 bits (533), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 157/576 (27%), Positives = 267/576 (46%), Gaps = 59/576 (10%)
Query: 83 DSTFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFH 142
+++ YSL A +G + + + Y ++ V ++ + K Y K ++EAI+L
Sbjct: 472 NASLYSL----AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLS 527
Query: 143 TMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTV 202
M+ E C+ V NS++N + + R E + + K M + P +T+N ++ +
Sbjct: 528 EMM-ENGCEPDVIVVNSLINTLYKA---DRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
Query: 203 CRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTP 262
+ G + AI+LF M + C P+ T+ TL D LCK + + A+ +L +M GC P
Sbjct: 584 GKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDV 643
Query: 263 VTFNVLINGLCKNGELGRA---------------------------AKLVDNM------F 289
T+N +I GL KNG++ A A L+++ F
Sbjct: 644 FTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF 703
Query: 290 LKGCL--PNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASK-CMPNEVTYGTIINGLVKLG 346
L C P + + LI + + +D AVS +R+VA+ C + II K
Sbjct: 704 LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHN 763
Query: 347 RAVDGARVLMSMEERKFHVNEYI--YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVV 404
V GAR L + V + Y+ LI GL + E A ++ Q+ GC P+
Sbjct: 764 N-VSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVAT 822
Query: 405 YSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMA 464
Y+ L+D + GK DE E+ EM + C AN T++ ++ G ++G A++++ D+
Sbjct: 823 YNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLM 882
Query: 465 KNNCVYNEVC-YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSV 523
+ C Y LI GL + G+L EA+ ++ ML GC+P+ Y+ +I+G AG
Sbjct: 883 SDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEA 942
Query: 524 EEALKLFNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCN 583
+ A LF M+ + +PD+ TY++L++ LC + + + + G +PD+V N
Sbjct: 943 DAACALFKRMV--KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000
Query: 584 IFLTALKEKLEAPQDGTDFLNELAIRLFKRQRTSGG 619
+ + L G E A+ LF +TS G
Sbjct: 1001 LIINGL---------GKSHRLEEALVLFNEMKTSRG 1027
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 150/645 (23%), Positives = 276/645 (42%), Gaps = 104/645 (16%)
Query: 85 TFYSLIQHYANSGDFKSLEMVLYRMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTM 144
T+ LI + + V +M+ + ++I + + ++ + + M
Sbjct: 295 TYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEM 354
Query: 145 VDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCR 204
+ H V +F +++ + + G + A + + + + ILPN T+N +I + R
Sbjct: 355 EKDGHVPDVV-TFTILVDALCKAGNFGEAFDTLDVM---RDQGILPNLHTYNTLICGLLR 410
Query: 205 LGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLLLDEMQVDGCFPTPVT 264
+ +D+A++LF M +P YTY +D K A+ ++M+ G P V
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVA 470
Query: 265 FNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMV 324
N + L K G A ++ + G +P+ VTYN ++ G +D+A+ LL M+
Sbjct: 471 CNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM 530
Query: 325 ASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAE 384
+ C P+ + ++IN L K R + ++ M M+E K Y+TL++GL K GK +
Sbjct: 531 ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQ 590
Query: 385 DAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSSLM 444
+A++L++ M++KGC PNT+ ++ L D LC+ + A ++LF+M++ GC + FTY++++
Sbjct: 591 EAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTII 650
Query: 445 KGFFESGKGHKAV----------------------------------------------- 457
G ++G+ +A+
Sbjct: 651 FGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQ 710
Query: 458 ---EIWKDMAKN----NCVYNEVCYS--VLIHGLCEDGK---------------LREARM 493
W+D+ + + N V +S ++ +G+C DG + AR
Sbjct: 711 PANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGART 770
Query: 494 VWTQMLSR-GCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQ---PDVFTYNI 549
++ + G +P + Y+ +I GL A +E A +F L+ KS PDV TYN
Sbjct: 771 LFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVF-----LQVKSTGCIPDVATYNF 825
Query: 550 LLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAIR 609
LL+A K I +L M C+ + +T NI ++ L K D D +L
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLV-KAGNVDDALDLYYDL--- 881
Query: 610 LFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRPKRIQAA 654
M + SP T+ ++ L + R+ A
Sbjct: 882 ----------------MSDRDFSPTACTYGPLIDGLSKSGRLYEA 910
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 141/573 (24%), Positives = 257/573 (44%), Gaps = 66/573 (11%)
Query: 108 RMRREKRVVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQE 167
RM+ K ++ + GK ++EAI LF MV + C +FN++ + + +
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-GCPPNTITFNTLFDCLCKN 621
Query: 168 GLYHRALEFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDI 227
AL+ +++ M +P+ T+N +I + + G V A+ F +M + PD
Sbjct: 622 DEVTLALKMLFKMMD---MGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDF 677
Query: 228 YTYCTLMDGLCKENRLDEAVL--------------------LLDEMQVDGCFPTPVTFN- 266
T CTL+ G+ K + +++A L+ + + V+F+
Sbjct: 678 VTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSE 737
Query: 267 -VLINGLCKNGEL--------------GRAAKLVDNMFLK--GCLPNEVTYNTLIHGLCL 309
++ NG+C++G+ A+ + F K G P TYN LI GL
Sbjct: 738 RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
++ A + ++ ++ C+P+ TY +++ K G+ + + M + N
Sbjct: 798 ADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMM-EKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEM 428
++ +ISGL K G +DA+ L+ +M ++ P Y LIDGL + G+ EA+++ M
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Query: 429 INNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKL 488
++ GC N Y+ L+ GF ++G+ A ++K M K + YSVL+ LC G++
Sbjct: 918 LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977
Query: 489 REARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQPDVFTYN 548
E + ++ G PDVV Y+ +I+GL + +EEAL LFNEM + PD++TYN
Sbjct: 978 DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT-PDLYTYN 1036
Query: 549 ILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDFLNELAI 608
L+ L + + + N + G +P++ T N +
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS------------------ 1078
Query: 609 RLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERV 641
+ + + + M+ SP T T+E++
Sbjct: 1079 ---LSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 214/487 (43%), Gaps = 53/487 (10%)
Query: 184 KHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRL 243
+ + N ++N +I + + A++++R M + P + TY +LM GL K +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 244 DEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTL 303
D + LL EM+ G P TF + I L + G++ A +++ M +GC P+ VTY L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 304 IHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKF 363
I LC LD A + ++M + P+ VTY T+++
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD----------------------- 336
Query: 364 HVNEYIYSTLISGLFKEGKAEDAMK-LWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAE 422
F + + D++K W +M + G P+ V ++ L+D LC+ G EA
Sbjct: 337 -------------RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAF 383
Query: 423 EILFEMINNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGL 482
+ L M + G N TY++L+ G + A+E++ +M Y V I
Sbjct: 384 DTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYY 443
Query: 483 CEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEMLCLEPKSQP 542
+ G A + +M ++G P++VA ++ ++ L AG EA ++F + + P
Sbjct: 444 GKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL--KDIGLVP 501
Query: 543 DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTALKEKLEAPQDGTDF 602
D TYN+++ K I +I LL+ MM+ GC+PD++ N + L + + F
Sbjct: 502 DSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMF 561
Query: 603 L--------------NELAIRLFKRQRTSGGFKIVEVMLQKFLSPQTSTWERVVQELCRP 648
+ N L L K + ++ E M+QK P T T+ + LC+
Sbjct: 562 MRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKN 621
Query: 649 KRIQAAI 655
+ A+
Sbjct: 622 DEVTLAL 628
Score = 97.8 bits (242), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
Query: 130 KAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYNHIVNAKHMNIL 189
K+ + EA +LF M+D + C+ +N ++N + G A + +V +
Sbjct: 903 KSGRLYEAKQLFEGMLD-YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE---GVR 958
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
P+ T+++++ +C +G VD + F+E+ PD+ Y +++GL K +RL+EA++L
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 250 LDEMQVD-GCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLC 308
+EM+ G P T+N LI L G + A K+ + + G PN T+N LI G
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078
Query: 309 LKGNLDKAVSLLDRMVASKCMPNEVTYGTIIN 340
L G + A ++ MV PN TY + N
Sbjct: 1079 LSGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>sp|Q9ZVX5|PP156_ARATH Pentatricopeptide repeat-containing protein At2g16880
OS=Arabidopsis thaliana GN=At2g16880 PE=2 SV=1
Length = 743
Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 153/546 (28%), Positives = 252/546 (46%), Gaps = 82/546 (15%)
Query: 121 FIFIFKAY---GKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQ---EGLYHRAL 174
F AY GK H+ A+++F M+ K + + N++L +++ A
Sbjct: 134 FDIALSAYLHEGKPHV---ALQIFQKMI-RLKLKPNLLTCNTLLIGLVRYPSSFSISSAR 189
Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVR-NCEPDIYTYCTL 233
E ++ +V + + N TFN+++ C G +++A+ + M PD TY T+
Sbjct: 190 EVFDDMVK---IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTI 246
Query: 234 MDGLCKENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGC 293
+ + K+ RL + LL +M+ +G P VT+N L+ G CK G L A ++V+ M
Sbjct: 247 LKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNV 306
Query: 294 LPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGAR 353
LP+ TYN LI+GLC G++ + + L+D M + K P+ VTY T+I+G +LG +++ +
Sbjct: 307 LPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARK 366
Query: 354 VLMSMEERKFHVNEYI------------------------------------YSTLISGL 377
++ ME N+ Y TLI
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 378 FKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANA 437
K G A+++ ++M +KG K NT+ + ++D LC+ K DEA +L G +
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 438 FTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLREARMVWTQ 497
TY +L+ GFF K KA+E+W +M K ++ LI GLC GK A + +
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDE 546
Query: 498 MLSRGCKPDVVAYSSMIHGLCNAGSVEEALKLFNEM------------------LCLEPK 539
+ G PD ++S+I G C G VE+A + +NE LC E
Sbjct: 547 LAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGM 606
Query: 540 SQP--------------DVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIF 585
++ D TYN +++A CK + + DLL+ M ++G +PD T N F
Sbjct: 607 TEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSF 666
Query: 586 LTALKE 591
++ L E
Sbjct: 667 ISLLME 672
Score = 176 bits (445), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 126/482 (26%), Positives = 217/482 (45%), Gaps = 73/482 (15%)
Query: 119 KSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRALEFYN 178
++F + Y +E+A+ + MV EF ++N++L + ++G R +
Sbjct: 205 QTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG---RLSDLKE 261
Query: 179 HIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLC 238
+++ K ++PN +T+N ++ C+LG + A Q+ M N PD+ TY L++GLC
Sbjct: 262 LLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLC 321
Query: 239 KENRLDEAVLLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMF--------- 289
+ E + L+D M+ P VT+N LI+G + G A KL++ M
Sbjct: 322 NAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQV 381
Query: 290 ---------------------------LKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
+ G P+ VTY+TLI G+L A+ ++
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441
Query: 323 MVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGK 382
M N +T TI++ L K + + +L S +R F V+E Y TLI G F+E K
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501
Query: 383 AEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMINNGCAANAFTYSS 442
E A+++W +M + P +++LI GLC GK + A E E+ +G + T++S
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561
Query: 443 LMKGFFESGKGHKAVEIWKDMAKN---------NCVYNEVC------------------- 474
++ G+ + G+ KA E + + K+ N + N +C
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621
Query: 475 ------YSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALK 528
Y+ +I C+D KL+EA + ++M +G +PD Y+S I L G + E +
Sbjct: 622 EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDE 681
Query: 529 LF 530
L
Sbjct: 682 LL 683
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/480 (25%), Positives = 212/480 (44%), Gaps = 77/480 (16%)
Query: 185 HMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCK---EN 241
H++ P+ F++ + G A+Q+F++M +P++ T TL+ GL +
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183
Query: 242 RLDEAVLLLDEMQVDGCFPTPVTFNVLINGLC---------------------------- 273
+ A + D+M G TFNVL+NG C
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243
Query: 274 --------KNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDRMVA 325
K G L +L+ +M G +PN VTYN L++G C G+L +A +++ M
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303
Query: 326 SKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYIYSTLISGLFKEGKAED 385
+ +P+ TY +INGL G +G ++ +M+ K + Y+TLI G F+ G + +
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363
Query: 386 AMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMIN-NGCAANAFTYSSLM 444
A KL +QM G K N V ++ + LC+ K + + E+++ +G + + TY +L+
Sbjct: 364 ARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLI 423
Query: 445 KGFFESGKGHKAVEIWKDMA-----------------------------------KNNCV 469
K + + G A+E+ ++M K +
Sbjct: 424 KAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFI 483
Query: 470 YNEVCYSVLIHGLCEDGKLREARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEEALKL 529
+EV Y LI G + K+ +A +W +M P V ++S+I GLC+ G E A++
Sbjct: 484 VDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK 543
Query: 530 FNEMLCLEPKSQPDVFTYNILLNALCKQSNISHSIDLLNSMMDRGCDPDLVTCNIFLTAL 589
F+E+ E PD T+N ++ CK+ + + + N + PD TCNI L L
Sbjct: 544 FDEL--AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 162/336 (48%), Gaps = 13/336 (3%)
Query: 190 PNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLMDGLCKENRLDEAVLL 249
P+ +T++ +IK ++G + A+++ REM + + + T T++D LCKE +LDEA L
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473
Query: 250 LDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFLKGCLPNEVTYNTLIHGLCL 309
L+ G VT+ LI G + ++ +A ++ D M P T+N+LI GLC
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533
Query: 310 KGNLDKAVSLLDRMVASKCMPNEVTYGTIINGLVKLGRAVDGARVLMSMEERKFHVNEYI 369
G + A+ D + S +P++ T+ +II G K GR + F + Y
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593
Query: 370 YSTLISGLFKEGKAEDAMKLWKQMMEKGCKPNTVVYSALIDGLCRVGKPDEAEEILFEMI 429
+ L++GL KEG E A+ + ++E+ + +TV Y+ +I C+ K EA ++L EM
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652
Query: 430 NNGCAANAFTYSSLMKGFFESGKGHKAVEIWKDMAKNNCVYNEVCYSVLIHGLCEDGKLR 489
G + FTY+S + E GK + E+ K +S + D ++
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSETDELLKK------------FSGKFGSMKRDLQVE 700
Query: 490 EARMVWTQMLSRGCKPDVVAYSSMIHGLCNAGSVEE 525
+ T + +AYS +I LC+ G ++E
Sbjct: 701 TEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKE 736
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 109/212 (51%), Gaps = 13/212 (6%)
Query: 115 VVLEKSFIFIFKAYGKAHLVEEAIRLFHTMVDEFHCKRTVKSFNSVLNVIIQEGLYHRAL 174
+V E ++ + + + VE+A+ ++ M + TV +FNS++ + G A+
Sbjct: 483 IVDEVTYGTLIMGFFREEKVEKALEMWDEM-KKVKITPTVSTFNSLIGGLCHHGKTELAM 541
Query: 175 EFYNHIVNAKHMNILPNTLTFNLVIKTVCRLGLVDNAIQLFREMPVRNCEPDIYTYCTLM 234
E ++ + + +LP+ TFN +I C+ G V+ A + + E + +PD YT L+
Sbjct: 542 EKFDELAES---GLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILL 598
Query: 235 DGLCKENRLDEAV----LLLDEMQVDGCFPTPVTFNVLINGLCKNGELGRAAKLVDNMFL 290
+GLCKE ++A+ L++E +VD VT+N +I+ CK+ +L A L+ M
Sbjct: 599 NGLCKEGMTEKALNFFNTLIEEREVD-----TVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Query: 291 KGCLPNEVTYNTLIHGLCLKGNLDKAVSLLDR 322
KG P+ TYN+ I L G L + LL +
Sbjct: 654 KGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 238,498,472
Number of Sequences: 539616
Number of extensions: 9817295
Number of successful extensions: 35851
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 422
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 23109
Number of HSP's gapped (non-prelim): 3075
length of query: 664
length of database: 191,569,459
effective HSP length: 124
effective length of query: 540
effective length of database: 124,657,075
effective search space: 67314820500
effective search space used: 67314820500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)